locus-tag class description CE462_00020 PF12477 Sex factor F TraW protein N terminal CE462_00025 PF06834 TraU protein CE462_00030 PF09673 Type-F conjugative transfer system pilin assembly protein CE462_00040 PF06986 Type-1V conjugative transfer system mating pair stabilisation CE462_00045 PF13728 F plasmid transfer operon protein CE462_00055 PF13728 F plasmid transfer operon protein CE462_00060 PF06122 Conjugative relaxosome accessory transposon protein CE462_00065 PF07916 TraG-like protein, N-terminal region CE462_00075 PF05818 Enterobacterial TraT complement resistance protein CE462_00080 PF12615 F sex factor protein N terminal CE462_00080 PF10412 Type IV secretion-system coupling protein DNA-binding domain CE462_00085 PF08751 TrwC relaxase CE462_00085 PF18340 DNA relaxase TraI 2B/2B-like domain CE462_00085 PF07057 DNA helicase TraI CE462_00085 PF18272 single-stranded DNA binding TraI N-terminal subdomain CE462_00090 PF05261 TraM protein, DNA-binding CE462_00095 PF01464 Transglycosylase SLT domain CE462_00110 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CE462_00115 PF01609 Transposase DDE domain CE462_00115 PF05598 Transposase domain (DUF772) CE462_00120 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CE462_00140 PF01555 DNA methylase CE462_00165 PF04002 RadC-like JAB domain CE462_00195 PF01848 Hok/gef family CE462_00220 PF13614 AAA domain CE462_00240 PF12419 SNF2 Helicase protein CE462_00240 PF00271 Helicase conserved C-terminal domain CE462_00240 PF00176 SNF2 family N-terminal domain CE462_00260 PF00239 Resolvase, N terminal domain CE462_00260 PF02796 Helix-turn-helix domain of resolvase CE462_00265 PF00665 Integrase core domain CE462_00275 PF01527 Transposase CE462_00320 PF13614 AAA domain CE462_00330 PF01526 Tn3 transposase DDE domain CE462_00330 PF13700 Domain of unknown function (DUF4158) CE462_00340 PF01934 Protein of unknown function DUF86 CE462_00345 PF02796 Helix-turn-helix domain of resolvase CE462_00345 PF00239 Resolvase, N terminal domain CE462_00360 PF05513 TraA CE462_00365 PF07178 TraL protein CE462_00370 PF05309 TraE protein CE462_00390 PF05932 Tir chaperone protein (CesT) family CE462_00400 PF12833 Helix-turn-helix domain CE462_00415 PF05932 Tir chaperone protein (CesT) family CE462_00420 PF05844 YopD protein CE462_00425 PF04888 Secretion system effector C (SseC) like family CE462_00430 PF07720 Tetratricopeptide repeat CE462_00435 PF04792 V antigen (LcrV) protein CE462_00440 PF07216 LcrG protein CE462_00445 PF09621 Type III secretion system regulator (LcrR) CE462_00450 PF00771 FHIPEP family CE462_00460 PF09474 Type III secretion system YscX (type_III_YscX) CE462_00470 PF09059 TyeA CE462_00475 PF07201 HrpJ-like domain CE462_00480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE462_00480 PF02874 ATP synthase alpha/beta family, beta-barrel domain CE462_00480 PF18269 T3SS EscN ATPase C-terminal domain CE462_00495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CE462_00500 PF00813 FliP family CE462_00505 PF01313 Bacterial export proteins, family 3 CE462_00510 PF01311 Bacterial export proteins, family 1 CE462_00515 PF01312 FlhB HrpN YscU SpaS Family CE462_00540 PF00561 alpha/beta hydrolase fold CE462_00550 PF13614 AAA domain CE462_00570 PF01695 IstB-like ATP binding protein CE462_00585 PF02796 Helix-turn-helix domain of resolvase CE462_00585 PF00239 Resolvase, N terminal domain CE462_00615 PF13592 Winged helix-turn helix CE462_00615 PF13358 DDE superfamily endonuclease CE462_00640 PF01848 Hok/gef family CE462_00650 PF00069 Protein kinase domain CE462_00650 PF09632 Rac1-binding domain CE462_00675 PF00816 H-NS histone family CE462_00685 PF13614 AAA domain CE462_00695 PF00872 Transposase, Mutator family CE462_00720 PF01548 Transposase CE462_00720 PF02371 Transposase IS116/IS110/IS902 family CE462_00725 PF02075 Crossover junction endodeoxyribonuclease RuvC CE462_00730 PF02108 Flagellar assembly protein FliH CE462_00735 PF06578 YOP proteins translocation protein K (YscK) CE462_00740 PF01514 Secretory protein of YscJ/FliF family CE462_00745 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI CE462_00750 PF09025 YopR, type III needle-polymerisation regulator CE462_00755 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) CE462_00760 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF CE462_00770 PF16697 Inner membrane component of T3SS, cytoplasmic domain CE462_00770 PF16693 Inner membrane component of T3SS, periplasmic domain CE462_00780 PF13614 AAA domain CE462_00805 PF00239 Resolvase, N terminal domain CE462_00805 PF02796 Helix-turn-helix domain of resolvase CE462_00810 PF01934 Protein of unknown function DUF86 CE462_00820 PF01526 Tn3 transposase DDE domain CE462_00820 PF13700 Domain of unknown function (DUF4158) CE462_00895 PF00308 Bacterial dnaA protein CE462_00895 PF08299 Bacterial dnaA protein helix-turn-helix CE462_00895 PF11638 DnaA N-terminal domain CE462_00900 PF02767 DNA polymerase III beta subunit, central domain CE462_00900 PF02768 DNA polymerase III beta subunit, C-terminal domain CE462_00900 PF00712 DNA polymerase III beta subunit, N-terminal domain CE462_00905 PF02463 RecF/RecN/SMC N terminal domain CE462_00910 PF00204 DNA gyrase B CE462_00910 PF00986 DNA gyrase B subunit, carboxyl terminus CE462_00910 PF18053 DNA gyrase B subunit insert domain CE462_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_00910 PF01751 Toprim domain CE462_00925 PF13280 WYL domain CE462_00925 PF08279 HTH domain CE462_00930 PF00011 Hsp20/alpha crystallin family CE462_00935 PF00011 Hsp20/alpha crystallin family CE462_00950 PF00155 Aminotransferase class I and II CE462_00965 PF07690 Major Facilitator Superfamily CE462_00970 PF00486 Transcriptional regulatory protein, C terminal CE462_00970 PF00072 Response regulator receiver domain CE462_00975 PF13492 GAF domain CE462_00975 PF02702 Osmosensitive K+ channel His kinase sensor domain CE462_00975 PF00512 His Kinase A (phospho-acceptor) domain CE462_00975 PF13493 Domain of unknown function (DUF4118) CE462_00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_00980 PF02669 K+-transporting ATPase, c chain CE462_00990 PF03814 Potassium-transporting ATPase A subunit CE462_01000 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_01000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE462_01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_01005 PF00512 His Kinase A (phospho-acceptor) domain CE462_01005 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_01010 PF00873 AcrB/AcrD/AcrF family CE462_01015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE462_01020 PF00440 Bacterial regulatory proteins, tetR family CE462_01055 PF12146 Serine aminopeptidase, S33 CE462_01060 PF00588 SpoU rRNA Methylase family CE462_01060 PF12105 SpoU, rRNA methylase, C-terminal CE462_01065 PF04607 Region found in RelA / SpoT proteins CE462_01065 PF02824 TGS domain CE462_01065 PF13291 ACT domain CE462_01070 PF01192 RNA polymerase Rpb6 CE462_01075 PF00625 Guanylate kinase CE462_01085 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CE462_01100 PF00892 EamA-like transporter family CE462_01120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_01120 PF03466 LysR substrate binding domain CE462_01125 PF00579 tRNA synthetases class I (W and Y) CE462_01130 PF00582 Universal stress protein family CE462_01135 PF07055 Enoyl reductase FAD binding domain CE462_01135 PF12241 Trans-2-enoyl-CoA reductase catalytic region CE462_01135 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CE462_01145 PF00210 Ferritin-like domain CE462_01155 PF01810 LysE type translocator CE462_01175 PF13808 DDE_Tnp_1-associated CE462_01175 PF01609 Transposase DDE domain CE462_01200 PF01609 Transposase DDE domain CE462_01200 PF13808 DDE_Tnp_1-associated CE462_01205 PF00512 His Kinase A (phospho-acceptor) domain CE462_01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_01205 PF00072 Response regulator receiver domain CE462_01205 PF00989 PAS fold CE462_01205 PF01627 Hpt domain CE462_01205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_01215 PF00512 His Kinase A (phospho-acceptor) domain CE462_01215 PF00072 Response regulator receiver domain CE462_01215 PF01627 Hpt domain CE462_01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_01215 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_01215 PF00989 PAS fold CE462_01225 PF07694 5TMR of 5TMR-LYT CE462_01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_01225 PF06580 Histidine kinase CE462_01230 PF04397 LytTr DNA-binding domain CE462_01230 PF00072 Response regulator receiver domain CE462_01235 PF07690 Major Facilitator Superfamily CE462_01240 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CE462_01240 PF02222 ATP-grasp domain CE462_01245 PF00731 AIR carboxylase CE462_01260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_01260 PF03466 LysR substrate binding domain CE462_01265 PF07715 TonB-dependent Receptor Plug Domain CE462_01265 PF00593 TonB dependent receptor CE462_01270 PF01177 Asp/Glu/Hydantoin racemase CE462_01300 PF00583 Acetyltransferase (GNAT) family CE462_01300 PF13380 CoA binding domain CE462_01300 PF13607 Succinyl-CoA ligase like flavodoxin domain CE462_01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_01315 PF03466 LysR substrate binding domain CE462_01320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CE462_01320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CE462_01325 PF00342 Phosphoglucose isomerase CE462_01335 PF05552 Conserved TM helix CE462_01335 PF00924 Mechanosensitive ion channel CE462_01340 PF00440 Bacterial regulatory proteins, tetR family CE462_01345 PF00692 dUTPase CE462_01350 PF02441 Flavoprotein CE462_01350 PF04127 DNA / pantothenate metabolism flavoprotein CE462_01355 PF04002 RadC-like JAB domain CE462_01360 PF00830 Ribosomal L28 family CE462_01365 PF00471 Ribosomal protein L33 CE462_01375 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CE462_01375 PF06827 Zinc finger found in FPG and IleRS CE462_01375 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CE462_01380 PF04393 Protein of unknown function (DUF535) CE462_01385 PF01467 Cytidylyltransferase-like CE462_01390 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CE462_01395 PF00535 Glycosyl transferase family 2 CE462_01400 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CE462_01405 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CE462_01410 PF03611 PTS system sugar-specific permease component CE462_01420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE462_01425 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE462_01425 PF00356 Bacterial regulatory proteins, lacI family CE462_01455 PF03748 Flagellar basal body-associated protein FliL CE462_01460 PF04345 Chorismate lyase CE462_01465 PF01040 UbiA prenyltransferase family CE462_01470 PF01553 Acyltransferase CE462_01475 PF00717 Peptidase S24-like CE462_01475 PF01726 LexA DNA binding domain CE462_01485 PF02630 SCO1/SenC CE462_01490 PF01554 MatE CE462_01495 PF00588 SpoU rRNA Methylase family CE462_01500 PF16527 Two-component sensor protein CpxA, periplasmic domain CE462_01500 PF00672 HAMP domain CE462_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_01500 PF00512 His Kinase A (phospho-acceptor) domain CE462_01505 PF00486 Transcriptional regulatory protein, C terminal CE462_01505 PF00072 Response regulator receiver domain CE462_01510 PF01545 Cation efflux family CE462_01510 PF16916 Dimerisation domain of Zinc Transporter CE462_01515 PF06426 Serine acetyltransferase, N-terminal CE462_01515 PF00132 Bacterial transferase hexapeptide (six repeats) CE462_01525 PF06005 Cell division protein ZapB CE462_01540 PF01612 3'-5' exonuclease CE462_01540 PF00476 DNA polymerase family A CE462_01540 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CE462_01540 PF01367 5'-3' exonuclease, C-terminal SAM fold CE462_01545 PF00132 Bacterial transferase hexapeptide (six repeats) CE462_01595 PF00356 Bacterial regulatory proteins, lacI family CE462_01600 PF13593 SBF-like CPA transporter family (DUF4137) CE462_01605 PF03781 Sulfatase-modifying factor enzyme 1 CE462_01605 PF12867 DinB superfamily CE462_01615 PF00756 Putative esterase CE462_01620 PF08240 Alcohol dehydrogenase GroES-like domain CE462_01620 PF00107 Zinc-binding dehydrogenase CE462_01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_01625 PF03466 LysR substrate binding domain CE462_01650 PF13361 UvrD-like helicase C-terminal domain CE462_01650 PF00580 UvrD/REP helicase N-terminal domain CE462_01690 PF04143 Sulphur transport CE462_01695 PF13808 DDE_Tnp_1-associated CE462_01695 PF01609 Transposase DDE domain CE462_01705 PF18267 Rubredoxin NAD+ reductase C-terminal domain CE462_01705 PF04324 BFD-like [2Fe-2S] binding domain CE462_01705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CE462_01705 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_01705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CE462_01710 PF03466 LysR substrate binding domain CE462_01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_01715 PF07690 Major Facilitator Superfamily CE462_01720 PF00004 ATPase family associated with various cellular activities (AAA) CE462_01720 PF07724 AAA domain (Cdc48 subfamily) CE462_01720 PF10431 C-terminal, D2-small domain, of ClpB protein CE462_01725 PF00227 Proteasome subunit CE462_01735 PF00750 tRNA synthetases class I (R) CE462_01735 PF05746 DALR anticodon binding domain CE462_01735 PF03485 Arginyl tRNA synthetase N terminal domain CE462_01745 PF04542 Sigma-70 region 2 CE462_01745 PF04545 Sigma-70, region 4 CE462_01755 PF02673 Bacitracin resistance protein BacA CE462_01760 PF00248 Aldo/keto reductase family CE462_01765 PF01263 Aldose 1-epimerase CE462_01770 PF10509 Galactokinase galactose-binding signature CE462_01770 PF00288 GHMP kinases N terminal domain CE462_01770 PF08544 GHMP kinases C terminal CE462_01775 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CE462_01775 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CE462_01780 PF16363 GDP-mannose 4,6 dehydratase CE462_01785 PF00356 Bacterial regulatory proteins, lacI family CE462_01790 PF02929 Beta galactosidase small chain CE462_01790 PF16353 Domain of unknown function(DUF4981) CE462_01790 PF00703 Glycosyl hydrolases family 2 CE462_01790 PF02837 Glycosyl hydrolases family 2, sugar binding domain CE462_01790 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CE462_01795 PF13407 Periplasmic binding protein domain CE462_01800 PF00005 ABC transporter CE462_01805 PF02653 Branched-chain amino acid transport system / permease component CE462_01810 PF00672 HAMP domain CE462_01810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_01810 PF02743 Cache domain CE462_01815 PF00872 Transposase, Mutator family CE462_01830 PF13358 DDE superfamily endonuclease CE462_01830 PF13592 Winged helix-turn helix CE462_01840 PF00696 Amino acid kinase family CE462_01845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CE462_01845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CE462_01850 PF03606 C4-dicarboxylate anaerobic carrier CE462_01855 PF01316 Arginine repressor, DNA binding domain CE462_01855 PF02863 Arginine repressor, C-terminal domain CE462_01860 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CE462_01860 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CE462_01865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CE462_01865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CE462_01880 PF02666 Phosphatidylserine decarboxylase CE462_01885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_01885 PF00672 HAMP domain CE462_01885 PF02743 Cache domain CE462_01890 PF08212 Lipocalin-like domain CE462_01900 PF00465 Iron-containing alcohol dehydrogenase CE462_01905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CE462_01905 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CE462_01905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CE462_01910 PF02233 NAD(P) transhydrogenase beta subunit CE462_01920 PF13309 HTH domain CE462_01920 PF08348 YheO-like PAS domain CE462_01925 PF03313 Serine dehydratase alpha chain CE462_01930 PF00375 Sodium:dicarboxylate symporter family CE462_01935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_01935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE462_01940 PF13525 Outer membrane lipoprotein CE462_01945 PF01479 S4 domain CE462_01945 PF00849 RNA pseudouridylate synthase CE462_01955 PF02861 Clp amino terminal domain, pathogenicity island component CE462_01955 PF17871 AAA lid domain CE462_01955 PF07724 AAA domain (Cdc48 subfamily) CE462_01955 PF10431 C-terminal, D2-small domain, of ClpB protein CE462_01955 PF00004 ATPase family associated with various cellular activities (AAA) CE462_01960 PF03590 Aspartate-ammonia ligase CE462_01965 PF01037 Lrp/AsnC ligand binding domain CE462_01975 PF10063 Uncharacterized integral membrane protein (DUF2301) CE462_01980 PF00478 IMP dehydrogenase / GMP reductase domain CE462_01980 PF00571 CBS domain CE462_01995 PF00512 His Kinase A (phospho-acceptor) domain CE462_01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_02005 PF00158 Sigma-54 interaction domain CE462_02005 PF00072 Response regulator receiver domain CE462_02010 PF06496 Protein of unknown function (DUF1097) CE462_02020 PF00174 Oxidoreductase molybdopterin binding domain CE462_02025 PF01794 Ferric reductase like transmembrane component CE462_02040 PF00486 Transcriptional regulatory protein, C terminal CE462_02040 PF00072 Response regulator receiver domain CE462_02045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_02045 PF08918 PhoQ Sensor CE462_02055 PF18364 Molybdopterin oxidoreductase N-terminal domain CE462_02055 PF00384 Molybdopterin oxidoreductase CE462_02055 PF01568 Molydopterin dinucleotide binding domain CE462_02060 PF03264 NapC/NirT cytochrome c family, N-terminal region CE462_02065 PF01751 Toprim domain CE462_02065 PF01131 DNA topoisomerase CE462_02070 PF02386 Cation transport protein CE462_02075 PF02254 TrkA-N domain CE462_02075 PF02080 TrkA-C domain CE462_02080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CE462_02080 PF01565 FAD binding domain CE462_02085 PF02237 Biotin protein ligase C terminal domain CE462_02085 PF08279 HTH domain CE462_02085 PF03099 Biotin/lipoate A/B protein ligase family CE462_02090 PF00485 Phosphoribulokinase / Uridine kinase family CE462_02105 PF03143 Elongation factor Tu C-terminal domain CE462_02105 PF03144 Elongation factor Tu domain 2 CE462_02105 PF00009 Elongation factor Tu GTP binding domain CE462_02115 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CE462_02120 PF00467 KOW motif CE462_02120 PF02357 Transcription termination factor nusG CE462_02125 PF00298 Ribosomal protein L11, RNA binding domain CE462_02125 PF03946 Ribosomal protein L11, N-terminal domain CE462_02130 PF00687 Ribosomal protein L1p/L10e family CE462_02135 PF00466 Ribosomal protein L10 CE462_02140 PF00542 Ribosomal protein L7/L12 C-terminal domain CE462_02140 PF16320 Ribosomal protein L7/L12 dimerisation domain CE462_02145 PF00562 RNA polymerase Rpb2, domain 6 CE462_02145 PF04561 RNA polymerase Rpb2, domain 2 CE462_02145 PF04565 RNA polymerase Rpb2, domain 3 CE462_02145 PF10385 RNA polymerase beta subunit external 1 domain CE462_02145 PF04563 RNA polymerase beta subunit CE462_02145 PF04560 RNA polymerase Rpb2, domain 7 CE462_02150 PF04997 RNA polymerase Rpb1, domain 1 CE462_02150 PF04998 RNA polymerase Rpb1, domain 5 CE462_02150 PF04983 RNA polymerase Rpb1, domain 3 CE462_02150 PF00623 RNA polymerase Rpb1, domain 2 CE462_02150 PF05000 RNA polymerase Rpb1, domain 4 CE462_02155 PF13309 HTH domain CE462_02155 PF08348 YheO-like PAS domain CE462_02160 PF01042 Endoribonuclease L-PSP CE462_02165 PF02635 DsrE/DsrF-like family CE462_02170 PF02635 DsrE/DsrF-like family CE462_02175 PF04077 DsrH like protein CE462_02180 PF00164 Ribosomal protein S12/S23 CE462_02185 PF00177 Ribosomal protein S7p/S5e CE462_02190 PF14492 Elongation Factor G, domain II CE462_02190 PF00009 Elongation factor Tu GTP binding domain CE462_02190 PF03764 Elongation factor G, domain IV CE462_02190 PF00679 Elongation factor G C-terminus CE462_02190 PF03144 Elongation factor Tu domain 2 CE462_02195 PF03143 Elongation factor Tu C-terminal domain CE462_02195 PF03144 Elongation factor Tu domain 2 CE462_02195 PF00009 Elongation factor Tu GTP binding domain CE462_02260 PF03922 OmpW family CE462_02280 PF02219 Methylenetetrahydrofolate reductase CE462_02290 PF03594 Benzoate membrane transport protein CE462_02295 PF07883 Cupin domain CE462_02295 PF01381 Helix-turn-helix CE462_02335 PF00860 Permease family CE462_02340 PF02733 Dak1 domain CE462_02345 PF02734 DAK2 domain CE462_02350 PF03610 PTS system fructose IIA component CE462_02350 PF05524 PEP-utilising enzyme, N-terminal CE462_02350 PF00391 PEP-utilising enzyme, mobile domain CE462_02350 PF00381 PTS HPr component phosphorylation site CE462_02355 PF00465 Iron-containing alcohol dehydrogenase CE462_02360 PF00989 PAS fold CE462_02360 PF02954 Bacterial regulatory protein, Fis family CE462_02360 PF00158 Sigma-54 interaction domain CE462_02365 PF01594 AI-2E family transporter CE462_02370 PF00293 NUDIX domain CE462_02395 PF00199 Catalase CE462_02395 PF06628 Catalase-related immune-responsive CE462_02400 PF00583 Acetyltransferase (GNAT) family CE462_02420 PF00990 Diguanylate cyclase, GGDEF domain CE462_02430 PF00005 ABC transporter CE462_02430 PF08402 TOBE domain CE462_02440 PF00528 Binding-protein-dependent transport system inner membrane component CE462_02465 PF03466 LysR substrate binding domain CE462_02465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_02475 PF17954 Quercetinase C-terminal cupin domain CE462_02475 PF02678 Pirin CE462_02480 PF07681 DoxX CE462_02485 PF17946 RecC C-terminal domain CE462_02490 PF12705 PD-(D/E)XK nuclease superfamily CE462_02490 PF13361 UvrD-like helicase C-terminal domain CE462_02490 PF00580 UvrD/REP helicase N-terminal domain CE462_02495 PF13538 UvrD-like helicase C-terminal domain CE462_02515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE462_02525 PF13808 DDE_Tnp_1-associated CE462_02525 PF01609 Transposase DDE domain CE462_02545 PF00543 Nitrogen regulatory protein P-II CE462_02550 PF00072 Response regulator receiver domain CE462_02550 PF00990 Diguanylate cyclase, GGDEF domain CE462_02565 PF00672 HAMP domain CE462_02565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_02565 PF00512 His Kinase A (phospho-acceptor) domain CE462_02570 PF00990 Diguanylate cyclase, GGDEF domain CE462_02580 PF00313 'Cold-shock' DNA-binding domain CE462_02585 PF17151 Periplasmic sensor domain CE462_02585 PF00990 Diguanylate cyclase, GGDEF domain CE462_02590 PF00005 ABC transporter CE462_02590 PF17755 UvrA DNA-binding domain CE462_02590 PF17760 UvrA interaction domain CE462_02595 PF00196 Bacterial regulatory proteins, luxR family CE462_02600 PF00436 Single-strand binding protein family CE462_02645 PF00158 Sigma-54 interaction domain CE462_02645 PF00072 Response regulator receiver domain CE462_02645 PF02954 Bacterial regulatory protein, Fis family CE462_02650 PF02049 Flagellar hook-basal body complex protein FliE CE462_02655 PF01514 Secretory protein of YscJ/FliF family CE462_02655 PF08345 Flagellar M-ring protein C-terminal CE462_02660 PF14842 FliG N-terminal domain CE462_02660 PF14841 FliG middle domain CE462_02660 PF01706 FliG C-terminal domain CE462_02670 PF18269 T3SS EscN ATPase C-terminal domain CE462_02670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE462_02685 PF04316 Anti-sigma-28 factor, FlgM CE462_02695 PF00460 Flagella basal body rod protein CE462_02700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_02700 PF00460 Flagella basal body rod protein CE462_02705 PF03963 Flagellar hook capping protein - N-terminal region CE462_02710 PF07559 Flagellar basal body protein FlaE CE462_02710 PF00460 Flagella basal body rod protein CE462_02710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_02715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_02715 PF00460 Flagella basal body rod protein CE462_02720 PF00460 Flagella basal body rod protein CE462_02720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_02725 PF02107 Flagellar L-ring protein CE462_02730 PF02119 Flagellar P-ring protein CE462_02740 PF00460 Flagella basal body rod protein CE462_02740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_02760 PF00700 Bacterial flagellin C-terminal helical region CE462_02760 PF00669 Bacterial flagellin N-terminal helical region CE462_02770 PF00700 Bacterial flagellin C-terminal helical region CE462_02770 PF00669 Bacterial flagellin N-terminal helical region CE462_02775 PF07196 Flagellin hook IN motif CE462_02775 PF07195 Flagellar hook-associated protein 2 C-terminus CE462_02775 PF02465 Flagellar hook-associated protein 2 N-terminus CE462_02780 PF02561 Flagellar protein FliS CE462_02800 PF04542 Sigma-70 region 2 CE462_02800 PF04545 Sigma-70, region 4 CE462_02805 PF01618 MotA/TolQ/ExbB proton channel family CE462_02810 PF13677 Membrane MotB of proton-channel complex MotA/MotB CE462_02810 PF00691 OmpA family CE462_02820 PF01464 Transglycosylase SLT domain CE462_02820 PF01476 LysM domain CE462_02830 PF02381 MraZ protein, putative antitoxin-like CE462_02835 PF01795 MraW methylase family CE462_02840 PF04999 Cell division protein FtsL CE462_02845 PF03717 Penicillin-binding Protein dimerisation domain CE462_02845 PF00905 Penicillin binding protein transpeptidase domain CE462_02850 PF02875 Mur ligase family, glutamate ligase domain CE462_02850 PF01225 Mur ligase family, catalytic domain CE462_02850 PF08245 Mur ligase middle domain CE462_02855 PF02875 Mur ligase family, glutamate ligase domain CE462_02855 PF08245 Mur ligase middle domain CE462_02855 PF01225 Mur ligase family, catalytic domain CE462_02860 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CE462_02860 PF00953 Glycosyl transferase family 4 CE462_02865 PF08245 Mur ligase middle domain CE462_02865 PF02875 Mur ligase family, glutamate ligase domain CE462_02870 PF01098 Cell cycle protein CE462_02875 PF04101 Glycosyltransferase family 28 C-terminal domain CE462_02875 PF03033 Glycosyltransferase family 28 N-terminal domain CE462_02880 PF02875 Mur ligase family, glutamate ligase domain CE462_02880 PF08245 Mur ligase middle domain CE462_02880 PF01225 Mur ligase family, catalytic domain CE462_02885 PF03799 Cell division protein FtsQ CE462_02885 PF08478 POTRA domain, FtsQ-type CE462_02890 PF02491 SHS2 domain inserted in FTSA CE462_02895 PF00091 Tubulin/FtsZ family, GTPase domain CE462_02895 PF12327 FtsZ family, C-terminal domain CE462_02900 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CE462_02910 PF01043 SecA preprotein cross-linking domain CE462_02910 PF07517 SecA DEAD-like domain CE462_02910 PF07516 SecA Wing and Scaffold domain CE462_02910 PF02810 SEC-C motif CE462_02920 PF00293 NUDIX domain CE462_02925 PF03884 DNA gyrase inhibitor YacG CE462_02930 PF07072 Cell division protein CE462_02935 PF01121 Dephospho-CoA kinase CE462_02940 PF01478 Type IV leader peptidase family CE462_02940 PF06750 Bacterial Peptidase A24 N-terminal domain CE462_02950 PF00437 Type II/IV secretion system protein CE462_02950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CE462_02960 PF07963 Prokaryotic N-terminal methylation motif CE462_02970 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CE462_02970 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CE462_02980 PF01510 N-acetylmuramoyl-L-alanine amidase CE462_02985 PF07729 FCD domain CE462_02985 PF00392 Bacterial regulatory proteins, gntR family CE462_02990 PF17831 Pyruvate dehydrogenase E1 component middle domain CE462_02990 PF00456 Transketolase, thiamine diphosphate binding domain CE462_02995 PF00364 Biotin-requiring enzyme CE462_02995 PF02817 e3 binding domain CE462_02995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CE462_03000 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_03000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE462_03005 PF08447 PAS fold CE462_03005 PF13426 PAS domain CE462_03005 PF00990 Diguanylate cyclase, GGDEF domain CE462_03005 PF00563 EAL domain CE462_03005 PF08448 PAS fold CE462_03005 PF05231 MASE1 CE462_03015 PF12729 Four helix bundle sensory module for signal transduction CE462_03015 PF00672 HAMP domain CE462_03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_03020 PF12729 Four helix bundle sensory module for signal transduction CE462_03020 PF00672 HAMP domain CE462_03020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_03030 PF06434 Aconitate hydratase 2 N-terminus CE462_03030 PF00330 Aconitase family (aconitate hydratase) CE462_03030 PF11791 Aconitate B N-terminal domain CE462_03035 PF12792 CSS motif domain associated with EAL CE462_03035 PF00563 EAL domain CE462_03045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_03045 PF03466 LysR substrate binding domain CE462_03050 PF03466 LysR substrate binding domain CE462_03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_03055 PF01810 LysE type translocator CE462_03065 PF07683 Cobalamin synthesis protein cobW C-terminal domain CE462_03065 PF02492 CobW/HypB/UreG, nucleotide-binding domain CE462_03080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CE462_03085 PF02152 Dihydroneopterin aldolase CE462_03090 PF02660 Glycerol-3-phosphate acyltransferase CE462_03200 PF13358 DDE superfamily endonuclease CE462_03200 PF13592 Winged helix-turn helix CE462_03230 PF01584 CheW-like domain CE462_03230 PF00072 Response regulator receiver domain CE462_03235 PF00106 short chain dehydrogenase CE462_03240 PF08351 Domain of unknown function (DUF1726) CE462_03240 PF13718 GNAT acetyltransferase 2 CE462_03240 PF05127 Helicase CE462_03240 PF17176 tRNA-binding domain CE462_03255 PF00210 Ferritin-like domain CE462_03265 PF02142 MGS-like domain CE462_03280 PF17763 Glutaminase/Asparaginase C-terminal domain CE462_03280 PF00710 Asparaginase, N-terminal CE462_03290 PF00356 Bacterial regulatory proteins, lacI family CE462_03300 PF00480 ROK family CE462_03305 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CE462_03310 PF00232 Glycosyl hydrolase family 1 CE462_03315 PF02378 Phosphotransferase system, EIIC CE462_03315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE462_03320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE462_03325 PF02378 Phosphotransferase system, EIIC CE462_03335 PF00356 Bacterial regulatory proteins, lacI family CE462_03340 PF02378 Phosphotransferase system, EIIC CE462_03340 PF00367 phosphotransferase system, EIIB CE462_03345 PF11941 Domain of unknown function (DUF3459) CE462_03345 PF00128 Alpha amylase, catalytic domain CE462_03350 PF14602 Hexapeptide repeat of succinyl-transferase CE462_03350 PF12464 Maltose acetyltransferase CE462_03360 PF03553 Na+/H+ antiporter family CE462_03395 PF00534 Glycosyl transferases group 1 CE462_03395 PF08323 Starch synthase catalytic domain CE462_03400 PF00483 Nucleotidyl transferase CE462_03405 PF08468 Methyltransferase small domain N-terminal CE462_03405 PF05175 Methyltransferase small domain CE462_03410 PF00701 Dihydrodipicolinate synthetase family CE462_03425 PF13419 Haloacid dehalogenase-like hydrolase CE462_03430 PF17209 Hfq protein CE462_03435 PF04403 Paraquat-inducible protein A CE462_03440 PF02470 MlaD protein CE462_03445 PF03886 ABC-type transport auxiliary lipoprotein component CE462_03450 PF01389 OmpA-like transmembrane domain CE462_03450 PF00691 OmpA family CE462_03460 PF00657 GDSL-like Lipase/Acylhydrolase CE462_03465 PF04076 Bacterial OB fold (BOF) protein CE462_03470 PF01464 Transglycosylase SLT domain CE462_03470 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CE462_03475 PF04362 Bacterial Fe(2+) trafficking CE462_03480 PF10576 Iron-sulfur binding domain of endonuclease III CE462_03480 PF00633 Helix-hairpin-helix motif CE462_03480 PF00730 HhH-GPD superfamily base excision DNA repair protein CE462_03480 PF14815 NUDIX domain CE462_03485 PF16537 Type II secretion system protein B CE462_03490 PF01471 Putative peptidoglycan binding domain CE462_03490 PF13401 AAA domain CE462_03495 PF12627 Probable RNA and SrmB- binding site of polymerase A CE462_03495 PF01743 Poly A polymerase head domain CE462_03495 PF01966 HD domain CE462_03500 PF01384 Phosphate transporter family CE462_03505 PF01865 Protein of unknown function DUF47 CE462_03520 PF03279 Bacterial lipid A biosynthesis acyltransferase CE462_03525 PF01467 Cytidylyltransferase-like CE462_03525 PF00294 pfkB family carbohydrate kinase CE462_03530 PF02321 Outer membrane efflux protein CE462_03535 PF00293 NUDIX domain CE462_03540 PF06853 Protein of unknown function (DUF1249) CE462_03545 PF00149 Calcineurin-like phosphoesterase CE462_03550 PF05728 Uncharacterised protein family (UPF0227) CE462_03555 PF00293 NUDIX domain CE462_03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_03565 PF01751 Toprim domain CE462_03565 PF00986 DNA gyrase B subunit, carboxyl terminus CE462_03565 PF00204 DNA gyrase B CE462_03570 PF00521 DNA gyrase/topoisomerase IV, subunit A CE462_03570 PF03989 DNA gyrase C-terminal domain, beta-propeller CE462_03630 PF00684 DnaJ central domain CE462_03630 PF01556 DnaJ C terminal domain CE462_03630 PF00226 DnaJ domain CE462_03635 PF07681 DoxX CE462_03640 PF00085 Thioredoxin CE462_03660 PF01553 Acyltransferase CE462_03680 PF01541 GIY-YIG catalytic domain CE462_03695 PF03167 Uracil DNA glycosylase superfamily CE462_03705 PF03466 LysR substrate binding domain CE462_03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_03710 PF00950 ABC 3 transport family CE462_03715 PF00005 ABC transporter CE462_03720 PF01297 Zinc-uptake complex component A periplasmic CE462_03740 PF01551 Peptidase family M23 CE462_03740 PF01476 LysM domain CE462_03740 PF08525 Opacity-associated protein A N-terminal motif CE462_03745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE462_03750 PF04222 Protein of unknown function (DUF416) CE462_03765 PF02028 BCCT, betaine/carnitine/choline family transporter CE462_03770 PF05192 MutS domain III CE462_03770 PF05188 MutS domain II CE462_03770 PF01624 MutS domain I CE462_03770 PF05190 MutS family domain IV CE462_03770 PF00488 MutS domain V CE462_03780 PF06953 Arsenical resistance operon trans-acting repressor ArsD CE462_03785 PF02374 Anion-transporting ATPase CE462_03790 PF01758 Sodium Bile acid symporter family CE462_03795 PF03960 ArsC family CE462_03815 PF00311 Phosphoenolpyruvate carboxylase CE462_03820 PF01546 Peptidase family M20/M25/M40 CE462_03820 PF07687 Peptidase dimerisation domain CE462_03825 PF02774 Semialdehyde dehydrogenase, dimerisation domain CE462_03825 PF01118 Semialdehyde dehydrogenase, NAD binding domain CE462_03830 PF00696 Amino acid kinase family CE462_03835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CE462_03835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CE462_03840 PF00764 Arginosuccinate synthase CE462_03845 PF00206 Lyase CE462_03845 PF14698 Argininosuccinate lyase C-terminal CE462_03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_03850 PF03466 LysR substrate binding domain CE462_03860 PF14552 Tautomerase enzyme CE462_03890 PF12464 Maltose acetyltransferase CE462_03890 PF14602 Hexapeptide repeat of succinyl-transferase CE462_03895 PF13194 Domain of unknown function (DUF4010) CE462_03910 PF00528 Binding-protein-dependent transport system inner membrane component CE462_03920 PF00528 Binding-protein-dependent transport system inner membrane component CE462_03925 PF12857 TOBE-like domain CE462_03925 PF00005 ABC transporter CE462_03930 PF03466 LysR substrate binding domain CE462_03930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_03935 PF00291 Pyridoxal-phosphate dependent enzyme CE462_03940 PF00528 Binding-protein-dependent transport system inner membrane component CE462_03945 PF00528 Binding-protein-dependent transport system inner membrane component CE462_03950 PF00005 ABC transporter CE462_03955 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_03960 PF18416 N-acetylglucosamine binding protein domain 2 CE462_03960 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CE462_03965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_03965 PF17200 Single Cache domain 2 CE462_03965 PF00672 HAMP domain CE462_04000 PF01522 Polysaccharide deacetylase CE462_04000 PF14883 Hypothetical glycosyl hydrolase family 13 CE462_04005 PF00535 Glycosyl transferase family 2 CE462_04050 PF11230 Protein of unknown function (DUF3029) CE462_04055 PF04055 Radical SAM superfamily CE462_04065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_04065 PF03466 LysR substrate binding domain CE462_04075 PF00155 Aminotransferase class I and II CE462_04080 PF02583 Metal-sensitive transcriptional repressor CE462_04100 PF00403 Heavy-metal-associated domain CE462_04105 PF08534 Redoxin CE462_04115 PF00271 Helicase conserved C-terminal domain CE462_04115 PF00270 DEAD/DEAH box helicase CE462_04130 PF03372 Endonuclease/Exonuclease/phosphatase family CE462_04135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_04135 PF08447 PAS fold CE462_04150 PF06062 Uncharacterised protein family (UPF0231) CE462_04155 PF05651 Putative sugar diacid recognition CE462_04155 PF13556 PucR C-terminal helix-turn-helix domain CE462_04155 PF17853 GGDEF-like domain CE462_04160 PF02447 GntP family permease CE462_04165 PF02595 Glycerate kinase family CE462_04175 PF00255 Glutathione peroxidase CE462_04180 PF03466 LysR substrate binding domain CE462_04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_04185 PF07662 Na+ dependent nucleoside transporter C-terminus CE462_04185 PF07670 Nucleoside recognition CE462_04185 PF01773 Na+ dependent nucleoside transporter N-terminus CE462_04190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CE462_04190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CE462_04195 PF00472 RF-1 domain CE462_04200 PF00543 Nitrogen regulatory protein P-II CE462_04205 PF13416 Bacterial extracellular solute-binding protein CE462_04215 PF00005 ABC transporter CE462_04215 PF08402 TOBE domain CE462_04220 PF04261 Dyp-type peroxidase family CE462_04225 PF01316 Arginine repressor, DNA binding domain CE462_04225 PF02863 Arginine repressor, C-terminal domain CE462_04230 PF00005 ABC transporter CE462_04235 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_04240 PF00528 Binding-protein-dependent transport system inner membrane component CE462_04245 PF00528 Binding-protein-dependent transport system inner membrane component CE462_04250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CE462_04250 PF00056 lactate/malate dehydrogenase, NAD binding domain CE462_04255 PF08238 Sel1 repeat CE462_04260 PF00970 Oxidoreductase FAD-binding domain CE462_04260 PF00175 Oxidoreductase NAD-binding domain CE462_04260 PF00042 Globin CE462_04265 PF02082 Transcriptional regulator CE462_04270 PF01595 Cyclin M transmembrane N-terminal domain CE462_04270 PF00571 CBS domain CE462_04270 PF03471 Transporter associated domain CE462_04275 PF01578 Cytochrome C assembly protein CE462_04280 PF00448 SRP54-type protein, GTPase domain CE462_04280 PF02881 SRP54-type protein, helical bundle domain CE462_04280 PF02978 Signal peptide binding domain CE462_04285 PF00886 Ribosomal protein S16 CE462_04290 PF01782 RimM N-terminal domain CE462_04290 PF05239 PRC-barrel domain CE462_04295 PF01746 tRNA (Guanine-1)-methyltransferase CE462_04300 PF01245 Ribosomal protein L19 CE462_04310 PF02976 DNA mismatch repair enzyme MutH CE462_04315 PF00293 NUDIX domain CE462_04320 PF05524 PEP-utilising enzyme, N-terminal CE462_04320 PF01590 GAF domain CE462_04320 PF02896 PEP-utilising enzyme, TIM barrel domain CE462_04320 PF00391 PEP-utilising enzyme, mobile domain CE462_04325 PF01790 Prolipoprotein diacylglyceryl transferase CE462_04330 PF00303 Thymidylate synthase CE462_04335 PF06965 Na+/H+ antiporter 1 CE462_04345 PF03466 LysR substrate binding domain CE462_04345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_04350 PF01022 Bacterial regulatory protein, arsR family CE462_04355 PF01649 Ribosomal protein S20 CE462_04360 PF03023 Lipid II flippase MurJ CE462_04365 PF01687 Riboflavin kinase CE462_04365 PF06574 FAD synthetase CE462_04370 PF00133 tRNA synthetases class I (I, L, M and V) CE462_04370 PF06827 Zinc finger found in FPG and IleRS CE462_04370 PF08264 Anticodon-binding domain of tRNA CE462_04375 PF01252 Signal peptidase (SPase) II CE462_04380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE462_04385 PF02401 LytB protein CE462_04390 PF07963 Prokaryotic N-terminal methylation motif CE462_04390 PF14245 Type IV pilin PilA CE462_04410 PF05567 Neisseria PilC beta-propeller domain CE462_04425 PF00795 Carbon-nitrogen hydrolase CE462_04425 PF02540 NAD synthase CE462_04430 PF00543 Nitrogen regulatory protein P-II CE462_04440 PF02664 S-Ribosylhomocysteinase (LuxS) CE462_04445 PF00990 Diguanylate cyclase, GGDEF domain CE462_04450 PF00575 S1 RNA binding domain CE462_04450 PF00773 RNB domain CE462_04450 PF08461 Ribonuclease R winged-helix domain CE462_04450 PF17876 Cold shock domain CE462_04450 PF08206 Ribonuclease B OB domain CE462_04455 PF08032 RNA 2'-O ribose methyltransferase substrate binding CE462_04455 PF00588 SpoU rRNA Methylase family CE462_04465 PF13673 Acetyltransferase (GNAT) domain CE462_04485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CE462_04485 PF01411 tRNA synthetases class II (A) CE462_04485 PF02272 DHHA1 domain CE462_04490 PF01566 Natural resistance-associated macrophage protein CE462_04495 PF01250 Ribosomal protein S6 CE462_04500 PF01084 Ribosomal protein S18 CE462_04505 PF03948 Ribosomal protein L9, C-terminal domain CE462_04505 PF01281 Ribosomal protein L9, N-terminal domain CE462_04510 PF00970 Oxidoreductase FAD-binding domain CE462_04510 PF00175 Oxidoreductase NAD-binding domain CE462_04535 PF00107 Zinc-binding dehydrogenase CE462_04535 PF08240 Alcohol dehydrogenase GroES-like domain CE462_04540 PF09335 SNARE associated Golgi protein CE462_04545 PF00675 Insulinase (Peptidase family M16) CE462_04545 PF05193 Peptidase M16 inactive domain CE462_04550 PF04262 Glutamate-cysteine ligase CE462_04560 PF00501 AMP-binding enzyme CE462_04570 PF13673 Acetyltransferase (GNAT) domain CE462_04570 PF00583 Acetyltransferase (GNAT) family CE462_04580 PF07728 AAA domain (dynein-related subfamily) CE462_04580 PF12592 Protein of unknown function (DUF3763) CE462_04580 PF17868 AAA lid domain CE462_04585 PF05762 VWA domain containing CoxE-like protein CE462_04595 PF01037 Lrp/AsnC ligand binding domain CE462_04605 PF00072 Response regulator receiver domain CE462_04605 PF00990 Diguanylate cyclase, GGDEF domain CE462_04610 PF00009 Elongation factor Tu GTP binding domain CE462_04610 PF16658 Class II release factor RF3, C-terminal domain CE462_04610 PF03144 Elongation factor Tu domain 2 CE462_04615 PF00583 Acetyltransferase (GNAT) family CE462_04620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CE462_04630 PF03129 Anticodon binding domain CE462_04630 PF04073 Aminoacyl-tRNA editing domain CE462_04630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CE462_04640 PF01330 RuvA N terminal domain CE462_04640 PF07499 RuvA, C-terminal domain CE462_04645 PF05491 RuvB C-terminal winged helix domain CE462_04645 PF17864 RuvB AAA lid domain CE462_04645 PF05496 Holliday junction DNA helicase RuvB P-loop domain CE462_04650 PF01654 Cytochrome bd terminal oxidase subunit I CE462_04655 PF02322 Cytochrome bd terminal oxidase subunit II CE462_04660 PF08173 Membrane bound YbgT-like protein CE462_04665 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CE462_04670 PF03061 Thioesterase superfamily CE462_04675 PF01618 MotA/TolQ/ExbB proton channel family CE462_04680 PF02472 Biopolymer transport protein ExbD/TolR CE462_04690 PF04052 TolB amino-terminal domain CE462_04690 PF07676 WD40-like Beta Propeller Repeat CE462_04695 PF00691 OmpA family CE462_04700 PF13174 Tetratricopeptide repeat CE462_04700 PF16331 TolA binding protein trimerisation CE462_04765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_04765 PF00672 HAMP domain CE462_04770 PF02445 Quinolinate synthetase A protein CE462_04775 PF01263 Aldose 1-epimerase CE462_04780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE462_04780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CE462_04785 PF02446 4-alpha-glucanotransferase CE462_04790 PF02806 Alpha amylase, C-terminal all-beta domain CE462_04790 PF00128 Alpha amylase, catalytic domain CE462_04790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CE462_04795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CE462_04795 PF00128 Alpha amylase, catalytic domain CE462_04800 PF01641 SelR domain CE462_04810 PF00027 Cyclic nucleotide-binding domain CE462_04810 PF07885 Ion channel CE462_04815 PF08239 Bacterial SH3 domain CE462_04820 PF00171 Aldehyde dehydrogenase family CE462_04820 PF01619 Proline dehydrogenase CE462_04820 PF14850 DNA-binding domain of Proline dehydrogenase CE462_04820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CE462_04825 PF09297 NADH pyrophosphatase zinc ribbon domain CE462_04825 PF00293 NUDIX domain CE462_04830 PF01208 Uroporphyrinogen decarboxylase (URO-D) CE462_04835 PF00719 Inorganic pyrophosphatase CE462_04840 PF08245 Mur ligase middle domain CE462_04840 PF02875 Mur ligase family, glutamate ligase domain CE462_04840 PF01225 Mur ligase family, catalytic domain CE462_04845 PF02441 Flavoprotein CE462_04850 PF00440 Bacterial regulatory proteins, tetR family CE462_04855 PF00156 Phosphoribosyl transferase domain CE462_04860 PF00005 ABC transporter CE462_04865 PF01061 ABC-2 type transporter CE462_04875 PF02569 Pantoate-beta-alanine ligase CE462_04880 PF02548 Ketopantoate hydroxymethyltransferase CE462_04885 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CE462_04890 PF12627 Probable RNA and SrmB- binding site of polymerase A CE462_04890 PF01743 Poly A polymerase head domain CE462_04890 PF12626 Polymerase A arginine-rich C-terminus CE462_04895 PF00749 tRNA synthetases class I (E and Q), catalytic domain CE462_04900 PF01258 Prokaryotic dksA/traR C4-type zinc finger CE462_04905 PF17746 SfsA N-terminal OB domain CE462_04905 PF03749 Sugar fermentation stimulation protein RE domain CE462_04915 PF00270 DEAD/DEAH box helicase CE462_04915 PF04408 Helicase associated domain (HA2) CE462_04915 PF00271 Helicase conserved C-terminal domain CE462_04915 PF08482 ATP-dependent helicase C-terminal CE462_04920 PF00912 Transglycosylase CE462_04920 PF14814 Bifunctional transglycosylase second domain CE462_04920 PF00905 Penicillin binding protein transpeptidase domain CE462_04925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE462_04930 PF00893 Small Multidrug Resistance protein CE462_04935 PF00893 Small Multidrug Resistance protein CE462_04940 PF03466 LysR substrate binding domain CE462_04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_04945 PF11849 Domain of unknown function (DUF3369) CE462_04955 PF01569 PAP2 superfamily CE462_04970 PF00202 Aminotransferase class-III CE462_04975 PF00654 Voltage gated chloride channel CE462_04985 PF01521 Iron-sulphur cluster biosynthesis CE462_05015 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CE462_05015 PF09297 NADH pyrophosphatase zinc ribbon domain CE462_05015 PF00293 NUDIX domain CE462_05020 PF00672 HAMP domain CE462_05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_05020 PF00512 His Kinase A (phospho-acceptor) domain CE462_05020 PF16527 Two-component sensor protein CpxA, periplasmic domain CE462_05025 PF00486 Transcriptional regulatory protein, C terminal CE462_05025 PF00072 Response regulator receiver domain CE462_05030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE462_05045 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CE462_05045 PF00326 Prolyl oligopeptidase family CE462_05050 PF05170 AsmA family CE462_05095 PF08220 DeoR-like helix-turn-helix domain CE462_05095 PF00455 DeoR C terminal sensor domain CE462_05100 PF08335 GlnD PII-uridylyltransferase CE462_05100 PF03710 Glutamate-ammonia ligase adenylyltransferase CE462_05115 PF00293 NUDIX domain CE462_05120 PF00107 Zinc-binding dehydrogenase CE462_05120 PF16884 N-terminal domain of oxidoreductase CE462_05125 PF02566 OsmC-like protein CE462_05130 PF01047 MarR family CE462_05145 PF01037 Lrp/AsnC ligand binding domain CE462_05155 PF07690 Major Facilitator Superfamily CE462_05175 PF00209 Sodium:neurotransmitter symporter family CE462_05185 PF00209 Sodium:neurotransmitter symporter family CE462_05210 PF00155 Aminotransferase class I and II CE462_05210 PF00392 Bacterial regulatory proteins, gntR family CE462_05220 PF01810 LysE type translocator CE462_05225 PF01177 Asp/Glu/Hydantoin racemase CE462_05235 PF04074 YhcH/YjgK/YiaL CE462_05240 PF00871 Acetokinase family CE462_05245 PF00924 Mechanosensitive ion channel CE462_05250 PF17969 L,D-transpeptidase C-terminal domain CE462_05250 PF03734 L,D-transpeptidase catalytic domain CE462_05255 PF00474 Sodium:solute symporter family CE462_05290 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CE462_05300 PF12848 ABC transporter CE462_05300 PF00005 ABC transporter CE462_05305 PF01380 SIS domain CE462_05305 PF00571 CBS domain CE462_05310 PF01957 NfeD-like C-terminal, partner-binding CE462_05315 PF01145 SPFH domain / Band 7 family CE462_05315 PF16200 C-terminal region of band_7 CE462_05320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CE462_05320 PF14824 Sirohaem biosynthesis protein central CE462_05320 PF10414 Sirohaem synthase dimerisation region CE462_05325 PF01507 Phosphoadenosine phosphosulfate reductase family CE462_05330 PF00009 Elongation factor Tu GTP binding domain CE462_05335 PF02080 TrkA-C domain CE462_05335 PF03600 Citrate transporter CE462_05345 PF01609 Transposase DDE domain CE462_05345 PF13808 DDE_Tnp_1-associated CE462_05395 PF00005 ABC transporter CE462_05410 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CE462_05435 PF00480 ROK family CE462_05440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CE462_05440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE462_05445 PF00162 Phosphoglycerate kinase CE462_05450 PF01116 Fructose-bisphosphate aldolase class-II CE462_05455 PF01266 FAD dependent oxidoreductase CE462_05465 PF11412 Disulphide bond corrector protein DsbC CE462_05465 PF02683 Cytochrome C biogenesis protein transmembrane region CE462_05470 PF03091 CutA1 divalent ion tolerance protein CE462_05490 PF01571 Aminomethyltransferase folate-binding domain CE462_05495 PF03937 Flavinator of succinate dehydrogenase CE462_05505 PF00890 FAD binding domain CE462_05505 PF02910 Fumarate reductase flavoprotein C-term CE462_05510 PF04542 Sigma-70 region 2 CE462_05510 PF08281 Sigma-70, region 4 CE462_05515 PF03872 Anti sigma-E protein RseA, N-terminal domain CE462_05515 PF03873 Anti sigma-E protein RseA, C-terminal domain CE462_05520 PF03888 MucB/RseB N-terminal domain CE462_05520 PF17188 MucB/RseB C-terminal domain CE462_05530 PF03144 Elongation factor Tu domain 2 CE462_05530 PF06421 GTP-binding protein LepA C-terminus CE462_05530 PF00009 Elongation factor Tu GTP binding domain CE462_05530 PF00679 Elongation factor G C-terminus CE462_05535 PF10502 Signal peptidase, peptidase S26 CE462_05540 PF00035 Double-stranded RNA binding motif CE462_05540 PF14622 Ribonuclease-III-like CE462_05545 PF01926 50S ribosome-binding GTPase CE462_05545 PF07650 KH domain CE462_05550 PF11967 Recombination protein O N terminal CE462_05550 PF02565 Recombination protein O C terminal CE462_05555 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CE462_05560 PF01510 N-acetylmuramoyl-L-alanine amidase CE462_05565 PF07308 Protein of unknown function (DUF1456) CE462_05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_05570 PF00512 His Kinase A (phospho-acceptor) domain CE462_05570 PF01627 Hpt domain CE462_05570 PF00072 Response regulator receiver domain CE462_05570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CE462_05570 PF00672 HAMP domain CE462_05575 PF05958 tRNA (Uracil-5-)-methyltransferase CE462_05575 PF01938 TRAM domain CE462_05580 PF02824 TGS domain CE462_05580 PF04607 Region found in RelA / SpoT proteins CE462_05580 PF13291 ACT domain CE462_05585 PF03819 MazG nucleotide pyrophosphohydrolase domain CE462_05590 PF00117 Glutamine amidotransferase class-I CE462_05590 PF06418 CTP synthase N-terminus CE462_05595 PF03952 Enolase, N-terminal domain CE462_05595 PF00113 Enolase, C-terminal TIM barrel domain CE462_05600 PF04977 Septum formation initiator CE462_05605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CE462_05610 PF02542 YgbB family CE462_05615 PF01142 tRNA pseudouridine synthase D (TruD) CE462_05620 PF01975 Survival protein SurE CE462_05630 PF09335 SNARE associated Golgi protein CE462_05635 PF01476 LysM domain CE462_05635 PF01551 Peptidase family M23 CE462_05640 PF04539 Sigma-70 region 3 CE462_05640 PF04542 Sigma-70 region 2 CE462_05640 PF00140 Sigma-70 factor, region 1.2 CE462_05640 PF04545 Sigma-70, region 4 CE462_05645 PF00814 Glycoprotease family CE462_05650 PF01165 Ribosomal protein S21 CE462_05655 PF09424 Yqey-like protein CE462_05660 PF01807 CHC2 zinc finger CE462_05660 PF08275 DNA primase catalytic core, N-terminal domain CE462_05660 PF08278 DNA primase DnaG DnaB-binding CE462_05660 PF10410 DnaB-helicase binding domain of primase CE462_05665 PF04546 Sigma-70, non-essential region CE462_05665 PF04542 Sigma-70 region 2 CE462_05665 PF00140 Sigma-70 factor, region 1.2 CE462_05665 PF04539 Sigma-70 region 3 CE462_05665 PF04545 Sigma-70, region 4 CE462_05665 PF03979 Sigma-70 factor, region 1.1 CE462_05675 PF13358 DDE superfamily endonuclease CE462_05675 PF13592 Winged helix-turn helix CE462_05705 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CE462_05705 PF02843 Phosphoribosylglycinamide synthetase, C domain CE462_05705 PF02844 Phosphoribosylglycinamide synthetase, N domain CE462_05710 PF01808 AICARFT/IMPCHase bienzyme CE462_05710 PF02142 MGS-like domain CE462_05715 PF13411 MerR HTH family regulatory protein CE462_05720 PF01872 RibD C-terminal domain CE462_05725 PF03889 Alternative ribosome-rescue factor A CE462_05730 PF06969 HemN C-terminal domain CE462_05730 PF04055 Radical SAM superfamily CE462_05735 PF01725 Ham1 family CE462_05740 PF07690 Major Facilitator Superfamily CE462_05745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CE462_05745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CE462_05755 PF13302 Acetyltransferase (GNAT) domain CE462_05760 PF13302 Acetyltransferase (GNAT) domain CE462_05765 PF02868 Thermolysin metallopeptidase, alpha-helical domain CE462_05765 PF07504 Fungalysin/Thermolysin Propeptide Motif CE462_05765 PF01447 Thermolysin metallopeptidase, catalytic domain CE462_05765 PF04151 Bacterial pre-peptidase C-terminal domain CE462_05765 PF03413 Peptidase propeptide and YPEB domain CE462_05770 PF03466 LysR substrate binding domain CE462_05770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_05775 PF07690 Major Facilitator Superfamily CE462_05780 PF00267 Gram-negative porin CE462_05785 PF03605 Anaerobic c4-dicarboxylate membrane transporter CE462_05790 PF10415 Fumarase C C-terminus CE462_05790 PF00206 Lyase CE462_05795 PF04186 FxsA cytoplasmic membrane protein CE462_05805 PF00166 Chaperonin 10 Kd subunit CE462_05810 PF00118 TCP-1/cpn60 chaperonin family CE462_05820 PF13188 PAS domain CE462_05820 PF03707 Bacterial signalling protein N terminal repeat CE462_05820 PF00990 Diguanylate cyclase, GGDEF domain CE462_05820 PF00563 EAL domain CE462_05830 PF00849 RNA pseudouridylate synthase CE462_05835 PF18337 RapA N-terminal Tudor like domain CE462_05835 PF18339 RapA N-terminal Tudor like domain 1 CE462_05835 PF00176 SNF2 family N-terminal domain CE462_05835 PF12137 RNA polymerase recycling family C-terminal CE462_05835 PF00271 Helicase conserved C-terminal domain CE462_05865 PF02867 Ribonucleotide reductase, barrel domain CE462_05865 PF08343 Ribonucleotide reductase N-terminal CE462_05865 PF00317 Ribonucleotide reductase, all-alpha domain CE462_05875 PF02562 PhoH-like protein CE462_05875 PF13638 PIN domain CE462_05880 PF00005 ABC transporter CE462_05885 PF00528 Binding-protein-dependent transport system inner membrane component CE462_05905 PF00694 Aconitase C-terminal domain CE462_05910 PF00330 Aconitase family (aconitate hydratase) CE462_05915 PF00180 Isocitrate/isopropylmalate dehydrogenase CE462_05920 PF00682 HMGL-like CE462_05920 PF08502 LeuA allosteric (dimerisation) domain CE462_05930 PF01569 PAP2 superfamily CE462_05945 PF00205 Thiamine pyrophosphate enzyme, central domain CE462_05945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE462_05945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CE462_05950 PF10369 Small subunit of acetolactate synthase CE462_05955 PF07085 DRTGG domain CE462_05955 PF01515 Phosphate acetyl/butaryl transferase CE462_05965 PF04217 Protein of unknown function, DUF412 CE462_05970 PF03887 YfbU domain CE462_05975 PF00578 AhpC/TSA family CE462_05980 PF01842 ACT domain CE462_05985 PF00701 Dihydrodipicolinate synthetase family CE462_05990 PF06804 NlpB/DapX lipoprotein CE462_05995 PF01259 SAICAR synthetase CE462_06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_06005 PF03466 LysR substrate binding domain CE462_06030 PF18415 Histidine kinase receptor ArcB trans-membrane domain CE462_06030 PF01627 Hpt domain CE462_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_06030 PF00072 Response regulator receiver domain CE462_06030 PF00512 His Kinase A (phospho-acceptor) domain CE462_06030 PF00989 PAS fold CE462_06035 PF01966 HD domain CE462_06050 PF00990 Diguanylate cyclase, GGDEF domain CE462_06050 PF00563 EAL domain CE462_06050 PF03707 Bacterial signalling protein N terminal repeat CE462_06055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_06055 PF00672 HAMP domain CE462_06055 PF12729 Four helix bundle sensory module for signal transduction CE462_06060 PF02357 Transcription termination factor nusG CE462_06065 PF03180 NLPA lipoprotein CE462_06070 PF00528 Binding-protein-dependent transport system inner membrane component CE462_06075 PF09383 NIL domain CE462_06075 PF00005 ABC transporter CE462_06085 PF00480 ROK family CE462_06090 PF08331 Domain of unknown function (DUF1730) CE462_06095 PF01256 Carbohydrate kinase CE462_06095 PF03853 YjeF-related protein N-terminus CE462_06100 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CE462_06105 PF01520 N-acetylmuramoyl-L-alanine amidase CE462_06110 PF08676 MutL C terminal dimerisation domain CE462_06110 PF01119 DNA mismatch repair protein, C-terminal domain CE462_06120 PF17209 Hfq protein CE462_06125 PF16360 GTP-binding GTPase Middle Region CE462_06125 PF13167 GTP-binding GTPase N-terminal CE462_06125 PF01926 50S ribosome-binding GTPase CE462_06130 PF12221 Bacterial membrane protein N terminal CE462_06130 PF01145 SPFH domain / Band 7 family CE462_06135 PF01145 SPFH domain / Band 7 family CE462_06140 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CE462_06145 PF00348 Polyprenyl synthetase CE462_06150 PF00829 Ribosomal prokaryotic L21 protein CE462_06155 PF01016 Ribosomal L27 protein CE462_06160 PF01018 GTP1/OBG CE462_06160 PF01926 50S ribosome-binding GTPase CE462_06170 PF00501 AMP-binding enzyme CE462_06170 PF13193 AMP-binding enzyme C-terminal domain CE462_06190 PF00296 Luciferase-like monooxygenase CE462_06205 PF00149 Calcineurin-like phosphoesterase CE462_06210 PF04379 ApaG domain CE462_06215 PF00398 Ribosomal RNA adenine dimethylase CE462_06220 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CE462_06225 PF00639 PPIC-type PPIASE domain CE462_06225 PF09312 SurA N-terminal domain CE462_06230 PF03968 OstA-like protein CE462_06230 PF04453 LPS transport system D CE462_06235 PF01636 Phosphotransferase enzyme family CE462_06240 PF00483 Nucleotidyl transferase CE462_06245 PF05099 Tellurite resistance protein TerB CE462_06245 PF00226 DnaJ domain CE462_06250 PF00860 Permease family CE462_06260 PF12848 ABC transporter CE462_06260 PF00005 ABC transporter CE462_06270 PF01370 NAD dependent epimerase/dehydratase family CE462_06280 PF00005 ABC transporter CE462_06285 PF01032 FecCD transport family CE462_06295 PF06228 Haem utilisation ChuX/HutX CE462_06300 PF01243 Pyridoxamine 5'-phosphate oxidase CE462_06320 PF07715 TonB-dependent Receptor Plug Domain CE462_06320 PF00593 TonB dependent receptor CE462_06325 PF12832 MFS_1 like family CE462_06335 PF13443 Cro/C1-type HTH DNA-binding domain CE462_06365 PF12561 ToxR activated gene A lipoprotein domain CE462_06365 PF17945 Beta/Gamma crystallin CE462_06370 PF18416 N-acetylglucosamine binding protein domain 2 CE462_06370 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CE462_06375 PF08241 Methyltransferase domain CE462_06380 PF13545 Crp-like helix-turn-helix domain CE462_06380 PF00027 Cyclic nucleotide-binding domain CE462_06385 PF02566 OsmC-like protein CE462_06400 PF00485 Phosphoribulokinase / Uridine kinase family CE462_06410 PF00892 EamA-like transporter family CE462_06415 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CE462_06420 PF01522 Polysaccharide deacetylase CE462_06430 PF00535 Glycosyl transferase family 2 CE462_06435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CE462_06445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CE462_06450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CE462_06450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CE462_06450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CE462_06455 PF06794 Uncharacterised protein family (UPF0270) CE462_06460 PF00990 Diguanylate cyclase, GGDEF domain CE462_06460 PF01590 GAF domain CE462_06460 PF00563 EAL domain CE462_06460 PF00360 Phytochrome region CE462_06465 PF00561 alpha/beta hydrolase fold CE462_06470 PF00072 Response regulator receiver domain CE462_06470 PF01584 CheW-like domain CE462_06480 PF09526 Probable metal-binding protein (DUF2387) CE462_06485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE462_06490 PF04102 SlyX CE462_06500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE462_06500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CE462_06505 PF00158 Sigma-54 interaction domain CE462_06505 PF00072 Response regulator receiver domain CE462_06505 PF02954 Bacterial regulatory protein, Fis family CE462_06525 PF02872 5'-nucleotidase, C-terminal domain CE462_06525 PF00149 Calcineurin-like phosphoesterase CE462_06530 PF12792 CSS motif domain associated with EAL CE462_06530 PF00563 EAL domain CE462_06545 PF03796 DnaB-like helicase C terminal domain CE462_06545 PF00772 DnaB-like helicase N terminal domain CE462_06550 PF03796 DnaB-like helicase C terminal domain CE462_06550 PF00772 DnaB-like helicase N terminal domain CE462_06555 PF01168 Alanine racemase, N-terminal domain CE462_06555 PF00842 Alanine racemase, C-terminal domain CE462_06560 PF12838 4Fe-4S dicluster domain CE462_06570 PF00990 Diguanylate cyclase, GGDEF domain CE462_06570 PF00563 EAL domain CE462_06570 PF01590 GAF domain CE462_06570 PF00989 PAS fold CE462_06585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CE462_06585 PF00072 Response regulator receiver domain CE462_06585 PF01627 Hpt domain CE462_06585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_06585 PF00672 HAMP domain CE462_06585 PF00512 His Kinase A (phospho-acceptor) domain CE462_06615 PF00266 Aminotransferase class-V CE462_06620 PF01339 CheB methylesterase CE462_06620 PF00072 Response regulator receiver domain CE462_06650 PF00816 H-NS histone family CE462_06655 PF00872 Transposase, Mutator family CE462_06665 PF00793 DAHP synthetase I family CE462_06670 PF04954 Siderophore-interacting protein CE462_06670 PF08021 Siderophore-interacting FAD-binding domain CE462_06675 PF02321 Outer membrane efflux protein CE462_06680 PF02687 FtsX-like permease family CE462_06680 PF00005 ABC transporter CE462_06680 PF12704 MacB-like periplasmic core domain CE462_06685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE462_06695 PF01368 DHH family CE462_06695 PF02833 DHHA2 domain CE462_06700 PF02463 RecF/RecN/SMC N terminal domain CE462_06705 PF01513 ATP-NAD kinase CE462_06710 PF01025 GrpE CE462_06715 PF00012 Hsp70 protein CE462_06720 PF00684 DnaJ central domain CE462_06720 PF01556 DnaJ C terminal domain CE462_06720 PF00226 DnaJ domain CE462_06725 PF02264 LamB porin CE462_06725 PF11471 Maltoporin periplasmic N-terminal extension CE462_06730 PF00294 pfkB family carbohydrate kinase CE462_06735 PF02378 Phosphotransferase system, EIIC CE462_06735 PF00367 phosphotransferase system, EIIB CE462_06740 PF08244 Glycosyl hydrolases family 32 C terminal CE462_06740 PF00251 Glycosyl hydrolases family 32 N-terminal domain CE462_06745 PF00356 Bacterial regulatory proteins, lacI family CE462_06745 PF13407 Periplasmic binding protein domain CE462_06750 PF02308 MgtC family CE462_06770 PF04143 Sulphur transport CE462_06785 PF00873 AcrB/AcrD/AcrF family CE462_06795 PF00563 EAL domain CE462_06795 PF03707 Bacterial signalling protein N terminal repeat CE462_06795 PF00990 Diguanylate cyclase, GGDEF domain CE462_06800 PF10437 Bacterial lipoate protein ligase C-terminus CE462_06800 PF03099 Biotin/lipoate A/B protein ligase family CE462_06830 PF00873 AcrB/AcrD/AcrF family CE462_06835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE462_06840 PF03372 Endonuclease/Exonuclease/phosphatase family CE462_06850 PF00486 Transcriptional regulatory protein, C terminal CE462_06850 PF00072 Response regulator receiver domain CE462_06855 PF02424 ApbE family CE462_06860 PF00127 Copper binding proteins, plastocyanin/azurin family CE462_06875 PF01156 Inosine-uridine preferring nucleoside hydrolase CE462_06900 PF07690 Major Facilitator Superfamily CE462_06905 PF01040 UbiA prenyltransferase family CE462_06915 PF00115 Cytochrome C and Quinol oxidase polypeptide I CE462_06920 PF06481 COX Aromatic Rich Motif CE462_06920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CE462_06930 PF00034 Cytochrome c CE462_06930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CE462_06955 PF00356 Bacterial regulatory proteins, lacI family CE462_06955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE462_06960 PF00367 phosphotransferase system, EIIB CE462_06960 PF02378 Phosphotransferase system, EIIC CE462_06980 PF13808 DDE_Tnp_1-associated CE462_06980 PF01609 Transposase DDE domain CE462_07005 PF01238 Phosphomannose isomerase type I CE462_07010 PF12833 Helix-turn-helix domain CE462_07015 PF00180 Isocitrate/isopropylmalate dehydrogenase CE462_07060 PF00589 Phage integrase family CE462_07060 PF13356 Arm DNA-binding domain CE462_07070 PF01668 SmpB protein CE462_07075 PF03364 Polyketide cyclase / dehydrase and lipid transport CE462_07085 PF13460 NAD(P)H-binding CE462_07090 PF04355 SmpA / OmlA family CE462_07120 PF00263 Bacterial type II and III secretion system protein CE462_07120 PF04972 BON domain CE462_07120 PF13629 Pilus formation protein N terminal region CE462_07130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CE462_07135 PF00437 Type II/IV secretion system protein CE462_07170 PF00465 Iron-containing alcohol dehydrogenase CE462_07175 PF01048 Phosphorylase superfamily CE462_07180 PF00849 RNA pseudouridylate synthase CE462_07185 PF01156 Inosine-uridine preferring nucleoside hydrolase CE462_07200 PF07509 Protein of unknown function (DUF1523) CE462_07205 PF00672 HAMP domain CE462_07205 PF12729 Four helix bundle sensory module for signal transduction CE462_07205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_07210 PF01810 LysE type translocator CE462_07220 PF13808 DDE_Tnp_1-associated CE462_07220 PF01609 Transposase DDE domain CE462_07225 PF02264 LamB porin CE462_07230 PF07148 Maltose operon periplasmic protein precursor (MalM) CE462_07235 PF00367 phosphotransferase system, EIIB CE462_07235 PF02378 Phosphotransferase system, EIIC CE462_07240 PF11944 Protein of unknown function (DUF3461) CE462_07245 PF00132 Bacterial transferase hexapeptide (six repeats) CE462_07245 PF14602 Hexapeptide repeat of succinyl-transferase CE462_07245 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CE462_07255 PF00557 Metallopeptidase family M24 CE462_07260 PF00318 Ribosomal protein S2 CE462_07265 PF00889 Elongation factor TS CE462_07270 PF00696 Amino acid kinase family CE462_07275 PF01765 Ribosome recycling factor CE462_07280 PF01255 Putative undecaprenyl diphosphate synthase CE462_07290 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CE462_07290 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CE462_07290 PF13288 DXP reductoisomerase C-terminal domain CE462_07295 PF17820 PDZ domain CE462_07295 PF02163 Peptidase family M50 CE462_07300 PF07244 Surface antigen variable number repeat CE462_07300 PF01103 Surface antigen CE462_07305 PF03938 Outer membrane protein (OmpH-like) CE462_07310 PF00132 Bacterial transferase hexapeptide (six repeats) CE462_07310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CE462_07315 PF07977 FabA-like domain CE462_07320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CE462_07320 PF00132 Bacterial transferase hexapeptide (six repeats) CE462_07325 PF02684 Lipid-A-disaccharide synthetase CE462_07330 PF01351 Ribonuclease HII CE462_07335 PF07733 Bacterial DNA polymerase III alpha NTPase domain CE462_07335 PF14579 Helix-hairpin-helix motif CE462_07335 PF02811 PHP domain CE462_07335 PF01336 OB-fold nucleic acid binding domain CE462_07335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CE462_07340 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CE462_07345 PF00486 Transcriptional regulatory protein, C terminal CE462_07345 PF18500 CadC C-terminal domain 1 CE462_07350 PF13520 Amino acid permease CE462_07355 PF01276 Orn/Lys/Arg decarboxylase, major domain CE462_07355 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CE462_07355 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CE462_07360 PF08543 Phosphomethylpyrimidine kinase CE462_07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_07370 PF03466 LysR substrate binding domain CE462_07380 PF13520 Amino acid permease CE462_07385 PF13302 Acetyltransferase (GNAT) domain CE462_07390 PF12848 ABC transporter CE462_07390 PF16326 ABC transporter C-terminal domain CE462_07390 PF00005 ABC transporter CE462_07400 PF05649 Peptidase family M13 CE462_07400 PF01431 Peptidase family M13 CE462_07405 PF11734 TilS substrate C-terminal domain CE462_07405 PF01171 PP-loop family CE462_07405 PF09179 TilS substrate binding domain CE462_07410 PF00990 Diguanylate cyclase, GGDEF domain CE462_07415 PF00999 Sodium/hydrogen exchanger family CE462_07415 PF02254 TrkA-N domain CE462_07415 PF02080 TrkA-C domain CE462_07435 PF00196 Bacterial regulatory proteins, luxR family CE462_07435 PF00072 Response regulator receiver domain CE462_07445 PF00128 Alpha amylase, catalytic domain CE462_07455 PF01161 Phosphatidylethanolamine-binding protein CE462_07465 PF03466 LysR substrate binding domain CE462_07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_07475 PF00155 Aminotransferase class I and II CE462_07480 PF07690 Major Facilitator Superfamily CE462_07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_07485 PF03466 LysR substrate binding domain CE462_07490 PF00106 short chain dehydrogenase CE462_07495 PF01343 Peptidase family S49 CE462_07495 PF08496 Peptidase family S49 N-terminal CE462_07500 PF04996 Succinylarginine dihydrolase CE462_07505 PF08272 Topoisomerase I zinc-ribbon-like CE462_07505 PF01751 Toprim domain CE462_07505 PF01131 DNA topoisomerase CE462_07505 PF01396 Topoisomerase DNA binding C4 zinc finger CE462_07515 PF08447 PAS fold CE462_07515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_07520 PF00728 Glycosyl hydrolase family 20, catalytic domain CE462_07520 PF02838 Glycosyl hydrolase family 20, domain 2 CE462_07525 PF01869 BadF/BadG/BcrA/BcrD ATPase family CE462_07535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_07535 PF00005 ABC transporter CE462_07540 PF00005 ABC transporter CE462_07540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_07545 PF00528 Binding-protein-dependent transport system inner membrane component CE462_07545 PF12911 N-terminal TM domain of oligopeptide transport permease C CE462_07550 PF00528 Binding-protein-dependent transport system inner membrane component CE462_07555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_07580 PF10725 Protein of unknown function (DUF2517) CE462_07590 PF13426 PAS domain CE462_07590 PF08447 PAS fold CE462_07590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_07600 PF04632 Fusaric acid resistance protein family CE462_07605 PF00994 Probable molybdopterin binding domain CE462_07605 PF03454 MoeA C-terminal region (domain IV) CE462_07605 PF03453 MoeA N-terminal region (domain I and II) CE462_07610 PF12804 MobA-like NTP transferase domain CE462_07615 PF00005 ABC transporter CE462_07620 PF00528 Binding-protein-dependent transport system inner membrane component CE462_07625 PF12849 PBP superfamily domain CE462_07635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_07635 PF00512 His Kinase A (phospho-acceptor) domain CE462_07635 PF00989 PAS fold CE462_07645 PF02634 FdhD/NarQ family CE462_07660 PF13808 DDE_Tnp_1-associated CE462_07660 PF01609 Transposase DDE domain CE462_07690 PF13808 DDE_Tnp_1-associated CE462_07690 PF01609 Transposase DDE domain CE462_07720 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CE462_07720 PF12838 4Fe-4S dicluster domain CE462_07720 PF00384 Molybdopterin oxidoreductase CE462_07720 PF01568 Molydopterin dinucleotide binding domain CE462_07720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CE462_07725 PF13247 4Fe-4S dicluster domain CE462_07740 PF00390 Malic enzyme, N-terminal domain CE462_07740 PF03949 Malic enzyme, NAD binding domain CE462_07745 PF00860 Permease family CE462_07750 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_07770 PF00390 Malic enzyme, N-terminal domain CE462_07770 PF03949 Malic enzyme, NAD binding domain CE462_07775 PF17203 Single cache domain 3 CE462_07775 PF00989 PAS fold CE462_07775 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CE462_07775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_07780 PF12431 Transcriptional regulator CE462_07780 PF00072 Response regulator receiver domain CE462_07790 PF00248 Aldo/keto reductase family CE462_07800 PF00892 EamA-like transporter family CE462_07810 PF03466 LysR substrate binding domain CE462_07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_07820 PF12697 Alpha/beta hydrolase family CE462_07825 PF01361 Tautomerase enzyme CE462_07830 PF00171 Aldehyde dehydrogenase family CE462_07835 PF01590 GAF domain CE462_07835 PF00158 Sigma-54 interaction domain CE462_07835 PF02954 Bacterial regulatory protein, Fis family CE462_07840 PF07694 5TMR of 5TMR-LYT CE462_07840 PF00990 Diguanylate cyclase, GGDEF domain CE462_07845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE462_07850 PF00486 Transcriptional regulatory protein, C terminal CE462_07850 PF00072 Response regulator receiver domain CE462_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_07855 PF00512 His Kinase A (phospho-acceptor) domain CE462_07855 PF00989 PAS fold CE462_07855 PF11808 Phosphate regulon sensor protein PhoR CE462_07860 PF12849 PBP superfamily domain CE462_07865 PF01435 Peptidase family M48 CE462_07875 PF00480 ROK family CE462_07880 PF03932 CutC family CE462_07885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CE462_07885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE462_07890 PF00005 ABC transporter CE462_07910 PF00293 NUDIX domain CE462_07920 PF08534 Redoxin CE462_07920 PF00462 Glutaredoxin CE462_07925 PF01699 Sodium/calcium exchanger protein CE462_07930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CE462_07930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CE462_07935 PF01235 Sodium:alanine symporter family CE462_07945 PF00860 Permease family CE462_07950 PF00990 Diguanylate cyclase, GGDEF domain CE462_07950 PF00072 Response regulator receiver domain CE462_07955 PF10692 Protein of unknown function (DUF2498) CE462_07960 PF01554 MatE CE462_07965 PF12833 Helix-turn-helix domain CE462_07970 PF00390 Malic enzyme, N-terminal domain CE462_07970 PF03949 Malic enzyme, NAD binding domain CE462_07975 PF00691 OmpA family CE462_07975 PF01389 OmpA-like transmembrane domain CE462_07980 PF00691 OmpA family CE462_07980 PF01389 OmpA-like transmembrane domain CE462_07985 PF00691 OmpA family CE462_07985 PF01389 OmpA-like transmembrane domain CE462_08005 PF00209 Sodium:neurotransmitter symporter family CE462_08010 PF01734 Patatin-like phospholipase CE462_08015 PF05230 MASE2 domain CE462_08015 PF00990 Diguanylate cyclase, GGDEF domain CE462_08020 PF13533 Biotin-lipoyl like CE462_08025 PF00873 AcrB/AcrD/AcrF family CE462_08035 PF11842 Domain of unknown function (DUF3362) CE462_08035 PF08497 Radical SAM N-terminal CE462_08035 PF04055 Radical SAM superfamily CE462_08045 PF13358 DDE superfamily endonuclease CE462_08045 PF13592 Winged helix-turn helix CE462_08050 PF13808 DDE_Tnp_1-associated CE462_08050 PF01609 Transposase DDE domain CE462_08065 PF02075 Crossover junction endodeoxyribonuclease RuvC CE462_08070 PF00230 Major intrinsic protein CE462_08075 PF01464 Transglycosylase SLT domain CE462_08075 PF10145 Phage-related minor tail protein CE462_08075 PF01551 Peptidase family M23 CE462_08080 PF00128 Alpha amylase, catalytic domain CE462_08085 PF01551 Peptidase family M23 CE462_08100 PF13396 Phospholipase_D-nuclease N-terminal CE462_08100 PF13091 PLD-like domain CE462_08110 PF01842 ACT domain CE462_08110 PF00551 Formyl transferase CE462_08115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CE462_08130 PF01648 4'-phosphopantetheinyl transferase superfamily CE462_08135 PF00877 NlpC/P60 family CE462_08140 PF05971 RNA methyltransferase CE462_08145 PF01575 MaoC like domain CE462_08155 PF01476 LysM domain CE462_08155 PF03734 L,D-transpeptidase catalytic domain CE462_08155 PF17969 L,D-transpeptidase C-terminal domain CE462_08185 PF13333 Integrase core domain CE462_08185 PF00665 Integrase core domain CE462_08185 PF13276 HTH-like domain CE462_08205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CE462_08205 PF02770 Acyl-CoA dehydrogenase, middle domain CE462_08205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CE462_08205 PF09317 Domain of unknown function (DUF1974) CE462_08210 PF00873 AcrB/AcrD/AcrF family CE462_08220 PF00224 Pyruvate kinase, barrel domain CE462_08220 PF02887 Pyruvate kinase, alpha/beta domain CE462_08225 PF01380 SIS domain CE462_08225 PF01418 Helix-turn-helix domain, rpiR family CE462_08230 PF02685 Glucokinase CE462_08250 PF04055 Radical SAM superfamily CE462_08250 PF00919 Uncharacterized protein family UPF0004 CE462_08250 PF18693 TRAM domain CE462_08255 PF00072 Response regulator receiver domain CE462_08270 PF02001 Protein of unknown function DUF134 CE462_08300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CE462_08300 PF02154 Flagellar motor switch protein FliM CE462_08305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CE462_08310 PF04347 Flagellar biosynthesis protein, FliO CE462_08315 PF00813 FliP family CE462_08320 PF01313 Bacterial export proteins, family 3 CE462_08325 PF01311 Bacterial export proteins, family 1 CE462_08330 PF01312 FlhB HrpN YscU SpaS Family CE462_08335 PF00771 FHIPEP family CE462_08340 PF00448 SRP54-type protein, GTPase domain CE462_08345 PF10609 NUBPL iron-transfer P-loop NTPase CE462_08350 PF04542 Sigma-70 region 2 CE462_08350 PF04539 Sigma-70 region 3 CE462_08350 PF04545 Sigma-70, region 4 CE462_08355 PF00072 Response regulator receiver domain CE462_08360 PF04344 Chemotaxis phosphatase, CheZ CE462_08365 PF13358 DDE superfamily endonuclease CE462_08365 PF13592 Winged helix-turn helix CE462_08370 PF00578 AhpC/TSA family CE462_08370 PF10417 C-terminal domain of 1-Cys peroxiredoxin CE462_08390 PF08003 Protein of unknown function (DUF1698) CE462_08395 PF13649 Methyltransferase domain CE462_08415 PF01336 OB-fold nucleic acid binding domain CE462_08415 PF00152 tRNA synthetases class II (D, K and N) CE462_08415 PF02938 GAD domain CE462_08420 PF01709 Transcriptional regulator CE462_08425 PF00884 Sulfatase CE462_08425 PF08019 Phosphoethanolamine transferase EptA/EptB CE462_08430 PF02838 Glycosyl hydrolase family 20, domain 2 CE462_08430 PF03173 Putative carbohydrate binding domain CE462_08430 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CE462_08430 PF00728 Glycosyl hydrolase family 20, catalytic domain CE462_08450 PF00550 Phosphopantetheine attachment site CE462_08450 PF00668 Condensation domain CE462_08450 PF13193 AMP-binding enzyme C-terminal domain CE462_08450 PF00501 AMP-binding enzyme CE462_08450 PF00550 Phosphopantetheine attachment site CE462_08450 PF00668 Condensation domain CE462_08450 PF00501 AMP-binding enzyme CE462_08450 PF13193 AMP-binding enzyme C-terminal domain CE462_08460 PF13737 Transposase DDE domain CE462_08480 PF00480 ROK family CE462_08480 PF01047 MarR family CE462_08485 PF01979 Amidohydrolase family CE462_08490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CE462_08505 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CE462_08505 PF00728 Glycosyl hydrolase family 20, catalytic domain CE462_08505 PF02838 Glycosyl hydrolase family 20, domain 2 CE462_08505 PF03173 Putative carbohydrate binding domain CE462_08510 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CE462_08510 PF00749 tRNA synthetases class I (E and Q), catalytic domain CE462_08515 PF01475 Ferric uptake regulator family CE462_08525 PF00258 Flavodoxin CE462_08530 PF01402 Ribbon-helix-helix protein, copG family CE462_08540 PF12697 Alpha/beta hydrolase family CE462_08545 PF17206 SeqA protein N-terminal domain CE462_08545 PF03925 SeqA protein C-terminal domain CE462_08550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CE462_08550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CE462_08550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CE462_08550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CE462_08560 PF01047 MarR family CE462_08565 PF13406 Transglycosylase SLT domain CE462_08570 PF01066 CDP-alcohol phosphatidyltransferase CE462_08575 PF00005 ABC transporter CE462_08580 PF00528 Binding-protein-dependent transport system inner membrane component CE462_08585 PF13416 Bacterial extracellular solute-binding protein CE462_08590 PF00403 Heavy-metal-associated domain CE462_08590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE462_08590 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_08595 PF02627 Carboxymuconolactone decarboxylase family CE462_08605 PF01625 Peptide methionine sulfoxide reductase CE462_08625 PF17243 POTRA domain TamA domain 1 CE462_08625 PF01103 Surface antigen CE462_08625 PF07244 Surface antigen variable number repeat CE462_08630 PF04357 TamB, inner membrane protein subunit of TAM complex CE462_08645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CE462_08650 PF03707 Bacterial signalling protein N terminal repeat CE462_08650 PF00990 Diguanylate cyclase, GGDEF domain CE462_08650 PF00563 EAL domain CE462_08655 PF14718 Soluble lytic murein transglycosylase L domain CE462_08655 PF01464 Transglycosylase SLT domain CE462_08660 PF00356 Bacterial regulatory proteins, lacI family CE462_08670 PF03061 Thioesterase superfamily CE462_08680 PF03372 Endonuclease/Exonuclease/phosphatase family CE462_08685 PF01464 Transglycosylase SLT domain CE462_08685 PF01476 LysM domain CE462_08690 PF00753 Metallo-beta-lactamase superfamily CE462_08690 PF16123 Hydroxyacylglutathione hydrolase C-terminus CE462_08695 PF08241 Methyltransferase domain CE462_08700 PF00075 RNase H CE462_08705 PF00929 Exonuclease CE462_08715 PF11849 Domain of unknown function (DUF3369) CE462_08720 PF09317 Domain of unknown function (DUF1974) CE462_08720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CE462_08720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CE462_08720 PF02770 Acyl-CoA dehydrogenase, middle domain CE462_08725 PF13580 SIS domain CE462_08730 PF13230 Glutamine amidotransferases class-II CE462_08740 PF01933 Uncharacterised protein family UPF0052 CE462_08750 PF00512 His Kinase A (phospho-acceptor) domain CE462_08750 PF00072 Response regulator receiver domain CE462_08750 PF09456 RcsC Alpha-Beta-Loop (ABL) CE462_08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_08760 PF00072 Response regulator receiver domain CE462_08760 PF00196 Bacterial regulatory proteins, luxR family CE462_08765 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CE462_08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_08765 PF00672 HAMP domain CE462_08765 PF07730 Histidine kinase CE462_08770 PF04055 Radical SAM superfamily CE462_08770 PF06463 Molybdenum Cofactor Synthesis C CE462_08775 PF12838 4Fe-4S dicluster domain CE462_08775 PF13187 4Fe-4S dicluster domain CE462_08785 PF00384 Molybdopterin oxidoreductase CE462_08785 PF10518 TAT (twin-arginine translocation) pathway signal sequence CE462_08785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CE462_08785 PF01568 Molydopterin dinucleotide binding domain CE462_08790 PF12800 4Fe-4S binding domain CE462_08790 PF12838 4Fe-4S dicluster domain CE462_08795 PF12837 4Fe-4S binding domain CE462_08795 PF12801 4Fe-4S binding domain CE462_08800 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CE462_08805 PF03264 NapC/NirT cytochrome c family, N-terminal region CE462_08810 PF00994 Probable molybdopterin binding domain CE462_08815 PF01967 MoaC family CE462_08820 PF02597 ThiS family CE462_08825 PF02391 MoaE protein CE462_08835 PF00528 Binding-protein-dependent transport system inner membrane component CE462_08840 PF00005 ABC transporter CE462_08840 PF03459 TOBE domain CE462_08845 PF00561 alpha/beta hydrolase fold CE462_08850 PF06406 StbA protein CE462_08860 PF06291 Bor protein CE462_08865 PF06291 Bor protein CE462_08870 PF00899 ThiF family CE462_08875 PF03453 MoeA N-terminal region (domain I and II) CE462_08875 PF03454 MoeA C-terminal region (domain IV) CE462_08875 PF00994 Probable molybdopterin binding domain CE462_08880 PF01227 GTP cyclohydrolase I CE462_08885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_08885 PF17200 Single Cache domain 2 CE462_08885 PF00672 HAMP domain CE462_08890 PF01268 Formate--tetrahydrofolate ligase CE462_08900 PF03466 LysR substrate binding domain CE462_08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_08905 PF04264 YceI-like domain CE462_08930 PF01546 Peptidase family M20/M25/M40 CE462_08930 PF07687 Peptidase dimerisation domain CE462_08940 PF17944 Arginine decarboxylase C-terminal helical extension CE462_08940 PF17810 Arginine decarboxylase helical bundle domain CE462_08940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CE462_08955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE462_08965 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CE462_08965 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CE462_08970 PF01479 S4 domain CE462_08970 PF00849 RNA pseudouridylate synthase CE462_08975 PF07690 Major Facilitator Superfamily CE462_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_08985 PF03466 LysR substrate binding domain CE462_08995 PF10689 Protein of unknown function (DUF2496) CE462_09005 PF04391 Protein of unknown function (DUF533) CE462_09010 PF00392 Bacterial regulatory proteins, gntR family CE462_09010 PF00155 Aminotransferase class I and II CE462_09015 PF01654 Cytochrome bd terminal oxidase subunit I CE462_09040 PF07690 Major Facilitator Superfamily CE462_09045 PF00248 Aldo/keto reductase family CE462_09050 PF03992 Antibiotic biosynthesis monooxygenase CE462_09075 PF03466 LysR substrate binding domain CE462_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_09080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CE462_09080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CE462_09085 PF00230 Major intrinsic protein CE462_09090 PF07690 Major Facilitator Superfamily CE462_09095 PF00455 DeoR C terminal sensor domain CE462_09095 PF08220 DeoR-like helix-turn-helix domain CE462_09105 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CE462_09105 PF01266 FAD dependent oxidoreductase CE462_09110 PF03009 Glycerophosphoryl diester phosphodiesterase family CE462_09115 PF00793 DAHP synthetase I family CE462_09120 PF01817 Chorismate mutase type II CE462_09120 PF02153 Prephenate dehydrogenase CE462_09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_09125 PF03466 LysR substrate binding domain CE462_09130 PF04219 Protein of unknown function, DUF CE462_09135 PF03974 Ecotin CE462_09155 PF00326 Prolyl oligopeptidase family CE462_09155 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CE462_09175 PF00884 Sulfatase CE462_09175 PF11893 Domain of unknown function (DUF3413) CE462_09180 PF07208 Protein of unknown function (DUF1414) CE462_09185 PF04245 37-kD nucleoid-associated bacterial protein CE462_09190 PF01547 Bacterial extracellular solute-binding protein CE462_09195 PF14785 Maltose transport system permease protein MalF P2 domain CE462_09195 PF00528 Binding-protein-dependent transport system inner membrane component CE462_09200 PF00528 Binding-protein-dependent transport system inner membrane component CE462_09205 PF00005 ABC transporter CE462_09205 PF08402 TOBE domain CE462_09210 PF03976 Polyphosphate kinase 2 (PPK2) CE462_09215 PF00561 alpha/beta hydrolase fold CE462_09220 PF01594 AI-2E family transporter CE462_09225 PF01206 Sulfurtransferase TusA CE462_09230 PF07720 Tetratricopeptide repeat CE462_09230 PF01435 Peptidase family M48 CE462_09240 PF03960 ArsC family CE462_09255 PF03956 Lysine exporter LysO CE462_09260 PF00005 ABC transporter CE462_09265 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_09270 PF00528 Binding-protein-dependent transport system inner membrane component CE462_09275 PF00528 Binding-protein-dependent transport system inner membrane component CE462_09290 PF04055 Radical SAM superfamily CE462_09295 PF03707 Bacterial signalling protein N terminal repeat CE462_09295 PF00563 EAL domain CE462_09295 PF00990 Diguanylate cyclase, GGDEF domain CE462_09300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE462_09300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_09305 PF00207 Alpha-2-macroglobulin family CE462_09305 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CE462_09305 PF07678 A-macroglobulin TED domain CE462_09305 PF07703 Alpha-2-macroglobulin bait region domain CE462_09305 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CE462_09305 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CE462_09305 PF01835 MG2 domain CE462_09305 PF17962 Bacterial macroglobulin domain 6 CE462_09305 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CE462_09310 PF00905 Penicillin binding protein transpeptidase domain CE462_09310 PF00912 Transglycosylase CE462_09310 PF06832 Penicillin-Binding Protein C-terminus Family CE462_09320 PF02926 THUMP domain CE462_09320 PF02568 Thiamine biosynthesis protein (ThiI) CE462_09330 PF03458 UPF0126 domain CE462_09335 PF00700 Bacterial flagellin C-terminal helical region CE462_09335 PF07196 Flagellin hook IN motif CE462_09335 PF00669 Bacterial flagellin N-terminal helical region CE462_09350 PF07195 Flagellar hook-associated protein 2 C-terminus CE462_09350 PF02465 Flagellar hook-associated protein 2 N-terminus CE462_09350 PF07196 Flagellin hook IN motif CE462_09355 PF02561 Flagellar protein FliS CE462_09365 PF01497 Periplasmic binding protein CE462_09375 PF01048 Phosphorylase superfamily CE462_09385 PF02535 ZIP Zinc transporter CE462_09390 PF00672 HAMP domain CE462_09390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_09395 PF00459 Inositol monophosphatase family CE462_09405 PF02798 Glutathione S-transferase, N-terminal domain CE462_09405 PF00043 Glutathione S-transferase, C-terminal domain CE462_09415 PF00528 Binding-protein-dependent transport system inner membrane component CE462_09420 PF12911 N-terminal TM domain of oligopeptide transport permease C CE462_09420 PF00528 Binding-protein-dependent transport system inner membrane component CE462_09425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_09425 PF00005 ABC transporter CE462_09430 PF07690 Major Facilitator Superfamily CE462_09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_09435 PF03466 LysR substrate binding domain CE462_09440 PF02634 FdhD/NarQ family CE462_09445 PF00384 Molybdopterin oxidoreductase CE462_09455 PF05164 Cell division protein ZapA CE462_09460 PF03695 Uncharacterised protein family (UPF0149) CE462_09465 PF01494 FAD binding domain CE462_09470 PF01494 FAD binding domain CE462_09475 PF01571 Aminomethyltransferase folate-binding domain CE462_09475 PF08669 Glycine cleavage T-protein C-terminal barrel domain CE462_09480 PF01597 Glycine cleavage H-protein CE462_09485 PF02347 Glycine cleavage system P-protein CE462_09495 PF07690 Major Facilitator Superfamily CE462_09500 PF13192 Thioredoxin domain CE462_09500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_09505 PF10417 C-terminal domain of 1-Cys peroxiredoxin CE462_09505 PF00578 AhpC/TSA family CE462_09510 PF00571 CBS domain CE462_09515 PF02547 Queuosine biosynthesis protein CE462_09520 PF01702 Queuine tRNA-ribosyltransferase CE462_09525 PF02699 Preprotein translocase subunit CE462_09530 PF13721 SecD export protein N-terminal TM region CE462_09530 PF07549 SecD/SecF GG Motif CE462_09530 PF02355 Protein export membrane protein CE462_09535 PF02355 Protein export membrane protein CE462_09535 PF07549 SecD/SecF GG Motif CE462_09540 PF00581 Rhodanese-like domain CE462_09545 PF13181 Tetratricopeptide repeat CE462_09545 PF07719 Tetratricopeptide repeat CE462_09570 PF00588 SpoU rRNA Methylase family CE462_09575 PF02082 Transcriptional regulator CE462_09580 PF00266 Aminotransferase class-V CE462_09585 PF01592 NifU-like N terminal domain CE462_09590 PF01521 Iron-sulphur cluster biosynthesis CE462_09595 PF07743 HSCB C-terminal oligomerisation domain CE462_09595 PF00226 DnaJ domain CE462_09600 PF00012 Hsp70 protein CE462_09605 PF00111 2Fe-2S iron-sulfur cluster binding domain CE462_09610 PF12404 Peptidase CE462_09610 PF00883 Cytosol aminopeptidase family, catalytic domain CE462_09615 PF00883 Cytosol aminopeptidase family, catalytic domain CE462_09615 PF12404 Peptidase CE462_09620 PF00334 Nucleoside diphosphate kinase CE462_09625 PF04055 Radical SAM superfamily CE462_09635 PF13464 Domain of unknown function (DUF4115) CE462_09640 PF04551 GcpE protein CE462_09645 PF03129 Anticodon binding domain CE462_09645 PF13393 Histidyl-tRNA synthetase CE462_09650 PF09976 Tetratricopeptide repeat-like domain CE462_09655 PF13360 PQQ-like domain CE462_09660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CE462_09660 PF01926 50S ribosome-binding GTPase CE462_09665 PF07191 zinc-ribbons CE462_09670 PF01464 Transglycosylase SLT domain CE462_09670 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_09675 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CE462_09675 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CE462_09675 PF02769 AIR synthase related protein, C-terminal domain CE462_09685 PF05661 Protein of unknown function (DUF808) CE462_09690 PF08439 Oligopeptidase F CE462_09690 PF01432 Peptidase family M3 CE462_09700 PF13808 DDE_Tnp_1-associated CE462_09700 PF01609 Transposase DDE domain CE462_09725 PF16199 Radical_SAM C-terminal domain CE462_09725 PF04055 Radical SAM superfamily CE462_09730 PF03412 Peptidase C39 family CE462_09730 PF00664 ABC transporter transmembrane region CE462_09730 PF00005 ABC transporter CE462_09795 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CE462_09795 PF12241 Trans-2-enoyl-CoA reductase catalytic region CE462_09795 PF07055 Enoyl reductase FAD binding domain CE462_09800 PF03606 C4-dicarboxylate anaerobic carrier CE462_09805 PF00155 Aminotransferase class I and II CE462_09815 PF00462 Glutaredoxin CE462_09820 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CE462_09825 PF00271 Helicase conserved C-terminal domain CE462_09825 PF04851 Type III restriction enzyme, res subunit CE462_09830 PF00529 HlyD membrane-fusion protein of T1SS CE462_09830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE462_09835 PF11742 Protein of unknown function (DUF3302) CE462_09840 PF02554 Carbon starvation protein CstA CE462_09845 PF04397 LytTr DNA-binding domain CE462_09845 PF00072 Response regulator receiver domain CE462_09850 PF07694 5TMR of 5TMR-LYT CE462_09850 PF06580 Histidine kinase CE462_09870 PF00171 Aldehyde dehydrogenase family CE462_09870 PF00465 Iron-containing alcohol dehydrogenase CE462_09880 PF01914 MarC family integral membrane protein CE462_09885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_09890 PF00528 Binding-protein-dependent transport system inner membrane component CE462_09895 PF00528 Binding-protein-dependent transport system inner membrane component CE462_09895 PF12911 N-terminal TM domain of oligopeptide transport permease C CE462_09900 PF00005 ABC transporter CE462_09900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_09910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_09910 PF00005 ABC transporter CE462_09915 PF03741 Integral membrane protein TerC family CE462_09920 PF01168 Alanine racemase, N-terminal domain CE462_09920 PF00842 Alanine racemase, C-terminal domain CE462_09930 PF00375 Sodium:dicarboxylate symporter family CE462_09945 PF01979 Amidohydrolase family CE462_09955 PF00672 HAMP domain CE462_09955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_09960 PF01230 HIT domain CE462_09995 PF07549 SecD/SecF GG Motif CE462_09995 PF13721 SecD export protein N-terminal TM region CE462_09995 PF02355 Protein export membrane protein CE462_10000 PF07549 SecD/SecF GG Motif CE462_10000 PF02355 Protein export membrane protein CE462_10005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_10005 PF08447 PAS fold CE462_10005 PF13426 PAS domain CE462_10015 PF01609 Transposase DDE domain CE462_10015 PF13808 DDE_Tnp_1-associated CE462_10030 PF00361 Proton-conducting membrane transporter CE462_10035 PF00361 Proton-conducting membrane transporter CE462_10040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CE462_10040 PF00361 Proton-conducting membrane transporter CE462_10045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CE462_10050 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CE462_10055 PF12838 4Fe-4S dicluster domain CE462_10060 PF00146 NADH dehydrogenase CE462_10065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CE462_10065 PF00384 Molybdopterin oxidoreductase CE462_10065 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CE462_10070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CE462_10070 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CE462_10080 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CE462_10080 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CE462_10085 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CE462_10090 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CE462_10095 PF13677 Membrane MotB of proton-channel complex MotA/MotB CE462_10095 PF00691 OmpA family CE462_10115 PF04536 TPM domain CE462_10125 PF03411 Penicillin-insensitive murein endopeptidase CE462_10130 PF00528 Binding-protein-dependent transport system inner membrane component CE462_10135 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_10140 PF00528 Binding-protein-dependent transport system inner membrane component CE462_10145 PF00005 ABC transporter CE462_10155 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CE462_10160 PF00248 Aldo/keto reductase family CE462_10170 PF00106 short chain dehydrogenase CE462_10175 PF01212 Beta-eliminating lyase CE462_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_10190 PF03466 LysR substrate binding domain CE462_10200 PF13592 Winged helix-turn helix CE462_10200 PF13358 DDE superfamily endonuclease CE462_10205 PF00563 EAL domain CE462_10205 PF00990 Diguanylate cyclase, GGDEF domain CE462_10205 PF03707 Bacterial signalling protein N terminal repeat CE462_10205 PF13188 PAS domain CE462_10210 PF00881 Nitroreductase family CE462_10225 PF07690 Major Facilitator Superfamily CE462_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_10230 PF03466 LysR substrate binding domain CE462_10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_10235 PF03466 LysR substrate binding domain CE462_10240 PF00925 GTP cyclohydrolase II CE462_10245 PF02224 Cytidylate kinase CE462_10250 PF00575 S1 RNA binding domain CE462_10255 PF00216 Bacterial DNA-binding protein CE462_10265 PF18073 Rubredoxin metal binding domain CE462_10270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CE462_10285 PF06508 Queuosine biosynthesis protein QueC CE462_10290 PF04055 Radical SAM superfamily CE462_10295 PF12843 Putative quorum-sensing-regulated virulence factor CE462_10300 PF01923 Cobalamin adenosyltransferase CE462_10305 PF00816 H-NS histone family CE462_10315 PF13358 DDE superfamily endonuclease CE462_10315 PF13592 Winged helix-turn helix CE462_10320 PF03553 Na+/H+ antiporter family CE462_10325 PF00265 Thymidine kinase CE462_10335 PF10722 Putative bacterial sensory transduction regulator CE462_10350 PF01168 Alanine racemase, N-terminal domain CE462_10350 PF00842 Alanine racemase, C-terminal domain CE462_10365 PF13808 DDE_Tnp_1-associated CE462_10365 PF01609 Transposase DDE domain CE462_10375 PF13247 4Fe-4S dicluster domain CE462_10380 PF03916 Polysulphide reductase, NrfD CE462_10385 PF00374 Nickel-dependent hydrogenase CE462_10390 PF01750 Hydrogenase maturation protease CE462_10395 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CE462_10400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_10405 PF00528 Binding-protein-dependent transport system inner membrane component CE462_10410 PF00528 Binding-protein-dependent transport system inner membrane component CE462_10410 PF12911 N-terminal TM domain of oligopeptide transport permease C CE462_10415 PF00005 ABC transporter CE462_10420 PF00005 ABC transporter CE462_10420 PF08402 TOBE domain CE462_10425 PF02492 CobW/HypB/UreG, nucleotide-binding domain CE462_10430 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CE462_10435 PF00586 AIR synthase related protein, N-terminal domain CE462_10435 PF02769 AIR synthase related protein, C-terminal domain CE462_10440 PF01924 Hydrogenase formation hypA family CE462_10445 PF01455 HupF/HypC family CE462_10450 PF01300 Telomere recombination CE462_10450 PF07503 HypF finger CE462_10450 PF00708 Acylphosphatase CE462_10450 PF17788 HypF Kae1-like domain CE462_10455 PF09107 Elongation factor SelB, winged helix CE462_10455 PF00009 Elongation factor Tu GTP binding domain CE462_10455 PF09106 Elongation factor SelB, winged helix CE462_10455 PF09105 Elongation factor SelB, winged helix CE462_10455 PF03144 Elongation factor Tu domain 2 CE462_10460 PF12390 Selenocysteine synthase N terminal CE462_10460 PF03841 L-seryl-tRNA selenium transferase CE462_10470 PF07450 Formate hydrogenlyase maturation protein HycH CE462_10475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CE462_10480 PF12838 4Fe-4S dicluster domain CE462_10485 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CE462_10485 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CE462_10485 PF00374 Nickel-dependent hydrogenase CE462_10490 PF00146 NADH dehydrogenase CE462_10495 PF00361 Proton-conducting membrane transporter CE462_10500 PF00037 4Fe-4S binding domain CE462_10500 PF12798 4Fe-4S binding domain CE462_10520 PF07693 KAP family P-loop domain CE462_10545 PF00158 Sigma-54 interaction domain CE462_10545 PF02954 Bacterial regulatory protein, Fis family CE462_10545 PF01590 GAF domain CE462_10550 PF02634 FdhD/NarQ family CE462_10555 PF02132 RecR protein CE462_10555 PF13662 Toprim domain CE462_10560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_10560 PF00183 Hsp90 protein CE462_10570 PF05191 Adenylate kinase, active site lid CE462_10575 PF00762 Ferrochelatase CE462_10580 PF01124 MAPEG family CE462_10585 PF00294 pfkB family carbohydrate kinase CE462_10590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_10590 PF00672 HAMP domain CE462_10590 PF17200 Single Cache domain 2 CE462_10635 PF07273 Protein of unknown function (DUF1439) CE462_10640 PF00425 chorismate binding enzyme CE462_10645 PF00501 AMP-binding enzyme CE462_10645 PF13193 AMP-binding enzyme C-terminal domain CE462_10650 PF00550 Phosphopantetheine attachment site CE462_10650 PF00857 Isochorismatase family CE462_10655 PF00550 Phosphopantetheine attachment site CE462_10655 PF00501 AMP-binding enzyme CE462_10655 PF00975 Thioesterase domain CE462_10655 PF13193 AMP-binding enzyme C-terminal domain CE462_10655 PF00668 Condensation domain CE462_10665 PF00550 Phosphopantetheine attachment site CE462_10665 PF07993 Male sterility protein CE462_10665 PF00668 Condensation domain CE462_10665 PF13193 AMP-binding enzyme C-terminal domain CE462_10665 PF00501 AMP-binding enzyme CE462_10675 PF01497 Periplasmic binding protein CE462_10680 PF01648 4'-phosphopantetheinyl transferase superfamily CE462_10680 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CE462_10685 PF00005 ABC transporter CE462_10690 PF01032 FecCD transport family CE462_10695 PF01032 FecCD transport family CE462_10700 PF07715 TonB-dependent Receptor Plug Domain CE462_10700 PF00593 TonB dependent receptor CE462_10715 PF11143 Protein of unknown function (DUF2919) CE462_10720 PF01544 CorA-like Mg2+ transporter protein CE462_10730 PF01012 Electron transfer flavoprotein domain CE462_10735 PF00766 Electron transfer flavoprotein FAD-binding domain CE462_10735 PF01012 Electron transfer flavoprotein domain CE462_10740 PF00266 Aminotransferase class-V CE462_10745 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CE462_10750 PF00793 DAHP synthetase I family CE462_10755 PF00672 HAMP domain CE462_10755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_10760 PF04055 Radical SAM superfamily CE462_10765 PF02601 Exonuclease VII, large subunit CE462_10765 PF13742 OB-fold nucleic acid binding domain CE462_10785 PF01609 Transposase DDE domain CE462_10785 PF13808 DDE_Tnp_1-associated CE462_10790 PF02472 Biopolymer transport protein ExbD/TolR CE462_10795 PF01618 MotA/TolQ/ExbB proton channel family CE462_10810 PF00478 IMP dehydrogenase / GMP reductase domain CE462_10810 PF00571 CBS domain CE462_10815 PF02540 NAD synthase CE462_10815 PF00958 GMP synthase C terminal domain CE462_10815 PF00117 Glutamine amidotransferase class-I CE462_10850 PF13358 DDE superfamily endonuclease CE462_10850 PF13592 Winged helix-turn helix CE462_10865 PF05724 Thiopurine S-methyltransferase (TPMT) CE462_10875 PF00300 Histidine phosphatase superfamily (branch 1) CE462_10885 PF00892 EamA-like transporter family CE462_10890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_10895 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CE462_10900 PF02559 CarD-like/TRCF domain CE462_10900 PF00270 DEAD/DEAH box helicase CE462_10900 PF03461 TRCF domain CE462_10900 PF17757 UvrB interaction domain CE462_10900 PF00271 Helicase conserved C-terminal domain CE462_10910 PF12704 MacB-like periplasmic core domain CE462_10910 PF02687 FtsX-like permease family CE462_10915 PF00005 ABC transporter CE462_10920 PF02687 FtsX-like permease family CE462_10920 PF12704 MacB-like periplasmic core domain CE462_10940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE462_10940 PF05698 Bacterial trigger factor protein (TF) C-terminus CE462_10940 PF05697 Bacterial trigger factor protein (TF) CE462_10945 PF00574 Clp protease CE462_10950 PF07724 AAA domain (Cdc48 subfamily) CE462_10950 PF06689 ClpX C4-type zinc finger CE462_10950 PF10431 C-terminal, D2-small domain, of ClpB protein CE462_10955 PF05362 Lon protease (S16) C-terminal proteolytic domain CE462_10955 PF00004 ATPase family associated with various cellular activities (AAA) CE462_10955 PF02190 ATP-dependent protease La (LON) substrate-binding domain CE462_10960 PF00216 Bacterial DNA-binding protein CE462_10965 PF13145 PPIC-type PPIASE domain CE462_10970 PF12848 ABC transporter CE462_10970 PF00005 ABC transporter CE462_10975 PF00474 Sodium:solute symporter family CE462_10980 PF04341 Protein of unknown function, DUF485 CE462_10995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CE462_10995 PF00378 Enoyl-CoA hydratase/isomerase CE462_10995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CE462_11000 PF01235 Sodium:alanine symporter family CE462_11005 PF00583 Acetyltransferase (GNAT) family CE462_11015 PF01184 GPR1/FUN34/yaaH family CE462_11030 PF00376 MerR family regulatory protein CE462_11030 PF09278 MerR, DNA binding CE462_11035 PF00682 HMGL-like CE462_11040 PF00289 Biotin carboxylase, N-terminal domain CE462_11040 PF02785 Biotin carboxylase C-terminal domain CE462_11040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CE462_11040 PF00364 Biotin-requiring enzyme CE462_11045 PF00378 Enoyl-CoA hydratase/isomerase CE462_11050 PF01039 Carboxyl transferase domain CE462_11070 PF00171 Aldehyde dehydrogenase family CE462_11075 PF02770 Acyl-CoA dehydrogenase, middle domain CE462_11075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CE462_11075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CE462_11080 PF00378 Enoyl-CoA hydratase/isomerase CE462_11085 PF00378 Enoyl-CoA hydratase/isomerase CE462_11090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CE462_11090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CE462_11100 PF13520 Amino acid permease CE462_11105 PF01925 Sulfite exporter TauE/SafE CE462_11130 PF13358 DDE superfamily endonuclease CE462_11130 PF13592 Winged helix-turn helix CE462_11140 PF13280 WYL domain CE462_11140 PF08279 HTH domain CE462_11150 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CE462_11150 PF01502 Phosphoribosyl-AMP cyclohydrolase CE462_11155 PF00977 Histidine biosynthesis protein CE462_11160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_11160 PF00512 His Kinase A (phospho-acceptor) domain CE462_11160 PF00072 Response regulator receiver domain CE462_11160 PF01627 Hpt domain CE462_11170 PF00072 Response regulator receiver domain CE462_11175 PF00977 Histidine biosynthesis protein CE462_11180 PF00117 Glutamine amidotransferase class-I CE462_11185 PF00475 Imidazoleglycerol-phosphate dehydratase CE462_11185 PF08645 Polynucleotide kinase 3 phosphatase CE462_11190 PF00155 Aminotransferase class I and II CE462_11195 PF00815 Histidinol dehydrogenase CE462_11200 PF08029 HisG, C-terminal domain CE462_11200 PF01634 ATP phosphoribosyltransferase CE462_11210 PF13307 Helicase C-terminal domain CE462_11210 PF04851 Type III restriction enzyme, res subunit CE462_11215 PF00814 Glycoprotease family CE462_11225 PF12697 Alpha/beta hydrolase family CE462_11230 PF13193 AMP-binding enzyme C-terminal domain CE462_11230 PF00501 AMP-binding enzyme CE462_11235 PF01612 3'-5' exonuclease CE462_11235 PF00570 HRDC domain CE462_11250 PF01207 Dihydrouridine synthase (Dus) CE462_11255 PF04304 Protein of unknown function (DUF454) CE462_11260 PF00156 Phosphoribosyl transferase domain CE462_11265 PF12169 DNA polymerase III subunits gamma and tau domain III CE462_11265 PF12170 DNA polymerase III tau subunit V interacting with alpha CE462_11265 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CE462_11270 PF02575 YbaB/EbfC DNA-binding family CE462_11280 PF00072 Response regulator receiver domain CE462_11280 PF00196 Bacterial regulatory proteins, luxR family CE462_11290 PF04408 Helicase associated domain (HA2) CE462_11290 PF11898 Domain of unknown function (DUF3418) CE462_11290 PF00271 Helicase conserved C-terminal domain CE462_11290 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CE462_11290 PF00270 DEAD/DEAH box helicase CE462_11300 PF01386 Ribosomal L25p family CE462_11305 PF00753 Metallo-beta-lactamase superfamily CE462_11315 PF00586 AIR synthase related protein, N-terminal domain CE462_11315 PF02769 AIR synthase related protein, C-terminal domain CE462_11330 PF10672 S-adenosylmethionine-dependent methyltransferase CE462_11330 PF17785 PUA-like domain CE462_11335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_11335 PF12729 Four helix bundle sensory module for signal transduction CE462_11335 PF00672 HAMP domain CE462_11340 PF00708 Acylphosphatase CE462_11345 PF00043 Glutathione S-transferase, C-terminal domain CE462_11345 PF13417 Glutathione S-transferase, N-terminal domain CE462_11350 PF01588 Putative tRNA binding domain CE462_11350 PF08264 Anticodon-binding domain of tRNA CE462_11350 PF09334 tRNA synthetases class I (M) CE462_11355 PF10609 NUBPL iron-transfer P-loop NTPase CE462_11360 PF00485 Phosphoribulokinase / Uridine kinase family CE462_11365 PF00692 dUTPase CE462_11370 PF01384 Phosphate transporter family CE462_11375 PF12111 Polyribonucleotide phosphorylase C terminal CE462_11375 PF00575 S1 RNA binding domain CE462_11375 PF10150 Ribonuclease E/G family CE462_11380 PF01479 S4 domain CE462_11380 PF00849 RNA pseudouridylate synthase CE462_11385 PF13419 Haloacid dehalogenase-like hydrolase CE462_11390 PF02545 Maf-like protein CE462_11395 PF02620 Large ribosomal RNA subunit accumulation protein YceD CE462_11400 PF01783 Ribosomal L32p protein family CE462_11405 PF02504 Fatty acid synthesis protein CE462_11410 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CE462_11410 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CE462_11415 PF00698 Acyl transferase domain CE462_11425 PF00550 Phosphopantetheine attachment site CE462_11430 PF02801 Beta-ketoacyl synthase, C-terminal domain CE462_11430 PF00109 Beta-ketoacyl synthase, N-terminal domain CE462_11435 PF01063 Amino-transferase class IV CE462_11440 PF02618 YceG-like family CE462_11445 PF02223 Thymidylate kinase CE462_11450 PF09115 DNA polymerase III, delta subunit, C terminal CE462_11455 PF01026 TatD related DNase CE462_11460 PF00589 Phage integrase family CE462_11475 PF00809 Pterin binding enzyme CE462_11480 PF01636 Phosphotransferase enzyme family CE462_11485 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CE462_11495 PF03466 LysR substrate binding domain CE462_11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_11500 PF07690 Major Facilitator Superfamily CE462_11520 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CE462_11520 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CE462_11520 PF01189 16S rRNA methyltransferase RsmB/F CE462_11530 PF04403 Paraquat-inducible protein A CE462_11545 PF00285 Citrate synthase, C-terminal domain CE462_11550 PF03972 MmgE/PrpD family CE462_11565 PF06974 Protein of unknown function (DUF1298) CE462_11565 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CE462_11590 PF00106 short chain dehydrogenase CE462_11620 PF01381 Helix-turn-helix CE462_11685 PF01609 Transposase DDE domain CE462_11685 PF13808 DDE_Tnp_1-associated CE462_11695 PF13654 AAA domain CE462_11695 PF05362 Lon protease (S16) C-terminal proteolytic domain CE462_11700 PF07977 FabA-like domain CE462_11705 PF04957 Ribosome modulation factor CE462_11725 PF10672 S-adenosylmethionine-dependent methyltransferase CE462_11725 PF02926 THUMP domain CE462_11725 PF01170 Putative RNA methylase family UPF0020 CE462_11735 PF07126 Cell-division protein ZapC CE462_11740 PF01180 Dihydroorotate dehydrogenase CE462_11750 PF01609 Transposase DDE domain CE462_11750 PF13808 DDE_Tnp_1-associated CE462_11765 PF11940 Domain of unknown function (DUF3458) Ig-like fold CE462_11765 PF01433 Peptidase family M1 domain CE462_11765 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CE462_11770 PF11818 C-terminal domain of tail specific protease (DUF3340) CE462_11770 PF03572 Peptidase family S41 CE462_11770 PF00595 PDZ domain CE462_11770 PF17804 Tail specific protease N-terminal domain CE462_11775 PF17516 ProQ C-terminal domain CE462_11775 PF04352 ProQ/FINO family CE462_11780 PF13185 GAF domain CE462_11790 PF00115 Cytochrome C and Quinol oxidase polypeptide I CE462_11805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CE462_11805 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CE462_11815 PF00403 Heavy-metal-associated domain CE462_11830 PF00027 Cyclic nucleotide-binding domain CE462_11830 PF13545 Crp-like helix-turn-helix domain CE462_11835 PF00582 Universal stress protein family CE462_11840 PF01171 PP-loop family CE462_11860 PF05025 RbsD / FucU transport protein family CE462_11870 PF02653 Branched-chain amino acid transport system / permease component CE462_11875 PF13407 Periplasmic binding protein domain CE462_11880 PF00294 pfkB family carbohydrate kinase CE462_11885 PF00356 Bacterial regulatory proteins, lacI family CE462_11905 PF02146 Sir2 family CE462_11920 PF00072 Response regulator receiver domain CE462_11920 PF09456 RcsC Alpha-Beta-Loop (ABL) CE462_11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_11920 PF00512 His Kinase A (phospho-acceptor) domain CE462_11925 PF00216 Bacterial DNA-binding protein CE462_11930 PF03147 Ferredoxin-fold anticodon binding domain CE462_11930 PF03483 B3/4 domain CE462_11930 PF01588 Putative tRNA binding domain CE462_11930 PF03484 tRNA synthetase B5 domain CE462_11930 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CE462_11935 PF01409 tRNA synthetases class II core domain (F) CE462_11935 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CE462_11940 PF00453 Ribosomal protein L20 CE462_11945 PF01632 Ribosomal protein L35 CE462_11950 PF00707 Translation initiation factor IF-3, C-terminal domain CE462_11950 PF05198 Translation initiation factor IF-3, N-terminal domain CE462_11955 PF03129 Anticodon binding domain CE462_11955 PF02824 TGS domain CE462_11955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CE462_11955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CE462_11965 PF04055 Radical SAM superfamily CE462_11970 PF00521 DNA gyrase/topoisomerase IV, subunit A CE462_11970 PF03989 DNA gyrase C-terminal domain, beta-propeller CE462_11980 PF13419 Haloacid dehalogenase-like hydrolase CE462_11985 PF03477 ATP cone domain CE462_11985 PF02867 Ribonucleotide reductase, barrel domain CE462_11985 PF00317 Ribonucleotide reductase, all-alpha domain CE462_11990 PF00268 Ribonucleotide reductase, small chain CE462_11995 PF00111 2Fe-2S iron-sulfur cluster binding domain CE462_12000 PF06725 3D domain CE462_12000 PF03562 MltA specific insert domain CE462_12005 PF06945 Protein of unknown function (DUF1289) CE462_12010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE462_12010 PF02378 Phosphotransferase system, EIIC CE462_12015 PF00294 pfkB family carbohydrate kinase CE462_12020 PF00381 PTS HPr component phosphorylation site CE462_12020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE462_12025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE462_12025 PF00356 Bacterial regulatory proteins, lacI family CE462_12030 PF03222 Tryptophan/tyrosine permease family CE462_12045 PF00271 Helicase conserved C-terminal domain CE462_12045 PF00270 DEAD/DEAH box helicase CE462_12055 PF01264 Chorismate synthase CE462_12060 PF05175 Methyltransferase small domain CE462_12065 PF01713 Smr domain CE462_12070 PF00990 Diguanylate cyclase, GGDEF domain CE462_12070 PF08448 PAS fold CE462_12095 PF13592 Winged helix-turn helix CE462_12095 PF13358 DDE superfamily endonuclease CE462_12120 PF08274 PhnA Zinc-Ribbon CE462_12120 PF03831 PhnA domain CE462_12125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CE462_12125 PF00378 Enoyl-CoA hydratase/isomerase CE462_12125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CE462_12130 PF00108 Thiolase, N-terminal domain CE462_12130 PF02803 Thiolase, C-terminal domain CE462_12135 PF07726 ATPase family associated with various cellular activities (AAA) CE462_12135 PF17863 AAA lid domain CE462_12140 PF01882 Protein of unknown function DUF58 CE462_12150 PF13519 von Willebrand factor type A domain CE462_12150 PF07728 AAA domain (dynein-related subfamily) CE462_12150 PF17863 AAA lid domain CE462_12165 PF04542 Sigma-70 region 2 CE462_12165 PF04545 Sigma-70, region 4 CE462_12175 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CE462_12180 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CE462_12185 PF00563 EAL domain CE462_12185 PF08668 HDOD domain CE462_12190 PF00108 Thiolase, N-terminal domain CE462_12190 PF02803 Thiolase, C-terminal domain CE462_12195 PF09278 MerR, DNA binding CE462_12195 PF00376 MerR family regulatory protein CE462_12200 PF00375 Sodium:dicarboxylate symporter family CE462_12205 PF06865 Pyrimidine/purine nucleoside phosphorylase CE462_12210 PF03313 Serine dehydratase alpha chain CE462_12210 PF03315 Serine dehydratase beta chain CE462_12220 PF03315 Serine dehydratase beta chain CE462_12220 PF03313 Serine dehydratase alpha chain CE462_12225 PF13406 Transglycosylase SLT domain CE462_12230 PF05166 YcgL domain CE462_12235 PF05209 Septum formation inhibitor MinC, N-terminal domain CE462_12235 PF03775 Septum formation inhibitor MinC, C-terminal domain CE462_12240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CE462_12245 PF03776 Septum formation topological specificity factor MinE CE462_12250 PF04269 Protein of unknown function, DUF440 CE462_12255 PF00912 Transglycosylase CE462_12260 PF04269 Protein of unknown function, DUF440 CE462_12270 PF13509 S1 domain CE462_12270 PF17783 CvfB-like winged helix domain CE462_12300 PF02525 Flavodoxin-like fold CE462_12305 PF00892 EamA-like transporter family CE462_12310 PF02222 ATP-grasp domain CE462_12315 PF13419 Haloacid dehalogenase-like hydrolase CE462_12325 PF00677 Lumazine binding domain CE462_12330 PF06786 Uncharacterised protein family (UPF0253) CE462_12335 PF01554 MatE CE462_12370 PF03104 DNA polymerase family B, exonuclease domain CE462_12370 PF00136 DNA polymerase family B CE462_12400 PF03279 Bacterial lipid A biosynthesis acyltransferase CE462_12410 PF03466 LysR substrate binding domain CE462_12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_12415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CE462_12415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CE462_12420 PF01261 Xylose isomerase-like TIM barrel CE462_12425 PF03466 LysR substrate binding domain CE462_12425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_12435 PF00232 Glycosyl hydrolase family 1 CE462_12440 PF03466 LysR substrate binding domain CE462_12440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_12445 PF13592 Winged helix-turn helix CE462_12445 PF13358 DDE superfamily endonuclease CE462_12460 PF03606 C4-dicarboxylate anaerobic carrier CE462_12470 PF05433 Glycine zipper 2TM domain CE462_12490 PF01032 FecCD transport family CE462_12495 PF00005 ABC transporter CE462_12500 PF07690 Major Facilitator Superfamily CE462_12510 PF07152 YaeQ protein CE462_12555 PF01327 Polypeptide deformylase CE462_12580 PF05036 Sporulation related domain CE462_12580 PF03330 Lytic transglycolase CE462_12585 PF16330 MukB hinge domain CE462_12585 PF04310 MukB N-terminal CE462_12590 PF04288 MukE-like family CE462_12595 PF17192 MukF middle domain CE462_12595 PF03882 MukF winged-helix domain CE462_12595 PF17193 MukF C-terminal domain CE462_12610 PF02698 DUF218 domain CE462_12615 PF00121 Triosephosphate isomerase CE462_12620 PF00365 Phosphofructokinase CE462_12655 PF13419 Haloacid dehalogenase-like hydrolase CE462_12700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CE462_12700 PF00128 Alpha amylase, catalytic domain CE462_12710 PF11398 Protein of unknown function (DUF2813) CE462_12715 PF14525 AraC-binding-like domain CE462_12715 PF12833 Helix-turn-helix domain CE462_12725 PF03466 LysR substrate binding domain CE462_12725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_12730 PF01925 Sulfite exporter TauE/SafE CE462_12745 PF01820 D-ala D-ala ligase N-terminus CE462_12745 PF07478 D-ala D-ala ligase C-terminus CE462_12755 PF00255 Glutathione peroxidase CE462_12760 PF00271 Helicase conserved C-terminal domain CE462_12760 PF00270 DEAD/DEAH box helicase CE462_12765 PF13673 Acetyltransferase (GNAT) domain CE462_12775 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CE462_12785 PF01928 CYTH domain CE462_12805 PF00465 Iron-containing alcohol dehydrogenase CE462_12810 PF03992 Antibiotic biosynthesis monooxygenase CE462_12815 PF08543 Phosphomethylpyrimidine kinase CE462_12835 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CE462_12835 PF00561 alpha/beta hydrolase fold CE462_12840 PF01575 MaoC like domain CE462_12855 PF00664 ABC transporter transmembrane region CE462_12855 PF00005 ABC transporter CE462_12865 PF00672 HAMP domain CE462_12865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CE462_12865 PF00072 Response regulator receiver domain CE462_12865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_12865 PF01627 Hpt domain CE462_12865 PF00512 His Kinase A (phospho-acceptor) domain CE462_12870 PF00085 Thioredoxin CE462_12875 PF00939 Sodium:sulfate symporter transmembrane region CE462_12880 PF00343 Carbohydrate phosphorylase CE462_12925 PF01609 Transposase DDE domain CE462_12925 PF13808 DDE_Tnp_1-associated CE462_12950 PF04715 Anthranilate synthase component I, N terminal region CE462_12950 PF00425 chorismate binding enzyme CE462_12955 PF00293 NUDIX domain CE462_12960 PF03222 Tryptophan/tyrosine permease family CE462_12965 PF00375 Sodium:dicarboxylate symporter family CE462_12970 PF09382 RQC domain CE462_12970 PF00270 DEAD/DEAH box helicase CE462_12970 PF00271 Helicase conserved C-terminal domain CE462_12970 PF00570 HRDC domain CE462_12970 PF16124 RecQ zinc-binding CE462_12975 PF08298 PrkA AAA domain CE462_12975 PF06798 PrkA serine protein kinase C-terminal domain CE462_12980 PF04285 Protein of unknown function (DUF444) CE462_12985 PF04293 SpoVR like protein CE462_12990 PF00392 Bacterial regulatory proteins, gntR family CE462_12990 PF07840 FadR C-terminal domain CE462_12995 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CE462_13000 PF02600 Disulfide bond formation protein DsbB CE462_13005 PF09335 SNARE associated Golgi protein CE462_13015 PF17757 UvrB interaction domain CE462_13015 PF12344 Ultra-violet resistance protein B CE462_13015 PF02151 UvrB/uvrC motif CE462_13015 PF04851 Type III restriction enzyme, res subunit CE462_13015 PF00271 Helicase conserved C-terminal domain CE462_13030 PF06826 Predicted Permease Membrane Region CE462_13030 PF02080 TrkA-C domain CE462_13035 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_13035 PF01464 Transglycosylase SLT domain CE462_13040 PF13808 DDE_Tnp_1-associated CE462_13040 PF01609 Transposase DDE domain CE462_13070 PF12431 Transcriptional regulator CE462_13070 PF08279 HTH domain CE462_13070 PF00072 Response regulator receiver domain CE462_13075 PF17203 Single cache domain 3 CE462_13075 PF00989 PAS fold CE462_13075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_13075 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CE462_13080 PF01047 MarR family CE462_13080 PF00480 ROK family CE462_13085 PF00672 HAMP domain CE462_13085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_13085 PF17200 Single Cache domain 2 CE462_13090 PF02810 SEC-C motif CE462_13095 PF04324 BFD-like [2Fe-2S] binding domain CE462_13095 PF01266 FAD dependent oxidoreductase CE462_13100 PF00890 FAD binding domain CE462_13105 PF02754 Cysteine-rich domain CE462_13105 PF13183 4Fe-4S dicluster domain CE462_13110 PF02335 Cytochrome c552 CE462_13115 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CE462_13115 PF13435 Cytochrome c554 and c-prime CE462_13120 PF13247 4Fe-4S dicluster domain CE462_13120 PF00037 4Fe-4S binding domain CE462_13125 PF03916 Polysulphide reductase, NrfD CE462_13130 PF01578 Cytochrome C assembly protein CE462_13130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CE462_13135 PF08534 Redoxin CE462_13140 PF03918 Cytochrome C biogenesis protein CE462_13150 PF00768 D-alanyl-D-alanine carboxypeptidase CE462_13155 PF01212 Beta-eliminating lyase CE462_13165 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CE462_13180 PF07969 Amidohydrolase family CE462_13195 PF01717 Cobalamin-independent synthase, Catalytic domain CE462_13195 PF08267 Cobalamin-independent synthase, N-terminal domain CE462_13200 PF03466 LysR substrate binding domain CE462_13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_13210 PF07715 TonB-dependent Receptor Plug Domain CE462_13210 PF00593 TonB dependent receptor CE462_13215 PF12833 Helix-turn-helix domain CE462_13215 PF06445 GyrI-like small molecule binding domain CE462_13220 PF00106 short chain dehydrogenase CE462_13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_13225 PF03466 LysR substrate binding domain CE462_13230 PF13460 NAD(P)H-binding CE462_13240 PF01053 Cys/Met metabolism PLP-dependent enzyme CE462_13250 PF01118 Semialdehyde dehydrogenase, NAD binding domain CE462_13250 PF02774 Semialdehyde dehydrogenase, dimerisation domain CE462_13255 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CE462_13255 PF18381 YcaO cyclodehydratase C-terminal domain CE462_13260 PF01226 Formate/nitrite transporter CE462_13265 PF02901 Pyruvate formate lyase-like CE462_13265 PF01228 Glycine radical CE462_13270 PF03692 Putative zinc- or iron-chelating domain CE462_13275 PF00549 CoA-ligase CE462_13275 PF02629 CoA binding domain CE462_13280 PF08442 ATP-grasp domain CE462_13280 PF00549 CoA-ligase CE462_13285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CE462_13285 PF02817 e3 binding domain CE462_13285 PF00364 Biotin-requiring enzyme CE462_13290 PF00676 Dehydrogenase E1 component CE462_13290 PF16078 2-oxoglutarate dehydrogenase N-terminus CE462_13290 PF02779 Transketolase, pyrimidine binding domain CE462_13290 PF16870 2-oxoglutarate dehydrogenase C-terminal CE462_13295 PF13085 2Fe-2S iron-sulfur cluster binding domain CE462_13300 PF02910 Fumarate reductase flavoprotein C-term CE462_13300 PF00890 FAD binding domain CE462_13305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CE462_13310 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CE462_13315 PF00285 Citrate synthase, C-terminal domain CE462_13330 PF02801 Beta-ketoacyl synthase, C-terminal domain CE462_13330 PF00109 Beta-ketoacyl synthase, N-terminal domain CE462_13335 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CE462_13335 PF01266 FAD dependent oxidoreductase CE462_13345 PF03606 C4-dicarboxylate anaerobic carrier CE462_13360 PF01863 Protein of unknown function DUF45 CE462_13375 PF01197 Ribosomal protein L31 CE462_13380 PF00444 Ribosomal protein L36 CE462_13400 PF07745 Glycosyl hydrolase family 53 CE462_13405 PF00528 Binding-protein-dependent transport system inner membrane component CE462_13435 PF00005 ABC transporter CE462_13435 PF17912 MalK OB fold domain CE462_13450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_13450 PF00672 HAMP domain CE462_13460 PF07745 Glycosyl hydrolase family 53 CE462_13465 PF07745 Glycosyl hydrolase family 53 CE462_13470 PF02264 LamB porin CE462_13480 PF00356 Bacterial regulatory proteins, lacI family CE462_13485 PF16363 GDP-mannose 4,6 dehydratase CE462_13505 PF10509 Galactokinase galactose-binding signature CE462_13505 PF08544 GHMP kinases C terminal CE462_13505 PF00288 GHMP kinases N terminal domain CE462_13510 PF02311 AraC-like ligand binding domain CE462_13510 PF12833 Helix-turn-helix domain CE462_13515 PF02653 Branched-chain amino acid transport system / permease component CE462_13520 PF00005 ABC transporter CE462_13525 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE462_13530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CE462_13535 PF00596 Class II Aldolase and Adducin N-terminal domain CE462_13540 PF11762 L-arabinose isomerase C-terminal domain CE462_13540 PF02610 L-arabinose isomerase CE462_13545 PF03466 LysR substrate binding domain CE462_13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_13550 PF00155 Aminotransferase class I and II CE462_13555 PF00795 Carbon-nitrogen hydrolase CE462_13560 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_13570 PF08411 Exonuclease C-terminal CE462_13570 PF00929 Exonuclease CE462_13590 PF03788 LrgA family CE462_13595 PF04172 LrgB-like family CE462_13600 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CE462_13600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CE462_13605 PF00501 AMP-binding enzyme CE462_13610 PF08891 YfcL protein CE462_13620 PF03741 Integral membrane protein TerC family CE462_13625 PF00691 OmpA family CE462_13630 PF17152 Periplasmic sensor domain CE462_13630 PF00990 Diguanylate cyclase, GGDEF domain CE462_13635 PF13689 YfiR/HmsC-like CE462_13640 PF18024 Helix-turn-helix domain CE462_13640 PF00158 Sigma-54 interaction domain CE462_13645 PF01329 Pterin 4 alpha carbinolamine dehydratase CE462_13650 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CE462_13655 PF05128 Domain of unknown function (DUF697) CE462_13660 PF04317 YcjX-like family, DUF463 CE462_13670 PF06667 Phage shock protein B CE462_13675 PF04012 PspA/IM30 family CE462_13680 PF02954 Bacterial regulatory protein, Fis family CE462_13680 PF00158 Sigma-54 interaction domain CE462_13685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_13690 PF00528 Binding-protein-dependent transport system inner membrane component CE462_13695 PF00528 Binding-protein-dependent transport system inner membrane component CE462_13695 PF12911 N-terminal TM domain of oligopeptide transport permease C CE462_13700 PF00005 ABC transporter CE462_13700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_13705 PF00005 ABC transporter CE462_13710 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CE462_13715 PF00156 Phosphoribosyl transferase domain CE462_13720 PF02674 Colicin V production protein CE462_13725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CE462_13725 PF02403 Seryl-tRNA synthetase N-terminal domain CE462_13730 PF12002 MgsA AAA+ ATPase C terminal CE462_13730 PF16193 AAA C-terminal domain CE462_13730 PF00004 ATPase family associated with various cellular activities (AAA) CE462_13735 PF03548 Outer membrane lipoprotein carrier protein LolA CE462_13740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CE462_13740 PF09397 Ftsk gamma domain CE462_13740 PF01580 FtsK/SpoIIIE family CE462_13740 PF17854 FtsK alpha domain CE462_13745 PF01037 Lrp/AsnC ligand binding domain CE462_13760 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_13770 PF05433 Glycine zipper 2TM domain CE462_13775 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CE462_13780 PF04377 Arginine-tRNA-protein transferase, C terminus CE462_13780 PF04376 Arginine-tRNA-protein transferase, N terminus CE462_13785 PF01176 Translation initiation factor 1A / IF-1 CE462_13790 PF00004 ATPase family associated with various cellular activities (AAA) CE462_13790 PF17871 AAA lid domain CE462_13790 PF07724 AAA domain (Cdc48 subfamily) CE462_13790 PF10431 C-terminal, D2-small domain, of ClpB protein CE462_13790 PF02861 Clp amino terminal domain, pathogenicity island component CE462_13795 PF02617 ATP-dependent Clp protease adaptor protein ClpS CE462_13800 PF00313 'Cold-shock' DNA-binding domain CE462_13805 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CE462_13805 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CE462_13865 PF02954 Bacterial regulatory protein, Fis family CE462_13865 PF00158 Sigma-54 interaction domain CE462_13865 PF02830 V4R domain CE462_13865 PF06505 Activator of aromatic catabolism CE462_13930 PF00916 Sulfate permease family CE462_13930 PF01740 STAS domain CE462_13980 PF00892 EamA-like transporter family CE462_13985 PF02508 Rnf-Nqr subunit, membrane protein CE462_13990 PF04060 Putative Fe-S cluster CE462_13995 PF10531 SLBB domain CE462_13995 PF12838 4Fe-4S dicluster domain CE462_13995 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CE462_13995 PF13375 RnfC Barrel sandwich hybrid domain CE462_14000 PF03116 NQR2, RnfD, RnfE family CE462_14005 PF04205 FMN-binding domain CE462_14010 PF02508 Rnf-Nqr subunit, membrane protein CE462_14015 PF00633 Helix-hairpin-helix motif CE462_14015 PF10576 Iron-sulfur binding domain of endonuclease III CE462_14015 PF00730 HhH-GPD superfamily base excision DNA repair protein CE462_14020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE462_14025 PF00691 OmpA family CE462_14025 PF18393 MotY N-terminal domain CE462_14030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_14030 PF00672 HAMP domain CE462_14030 PF12729 Four helix bundle sensory module for signal transduction CE462_14035 PF00929 Exonuclease CE462_14040 PF13726 Na+-H+ antiporter family CE462_14040 PF03553 Na+/H+ antiporter family CE462_14045 PF00563 EAL domain CE462_14045 PF03707 Bacterial signalling protein N terminal repeat CE462_14045 PF13188 PAS domain CE462_14045 PF00990 Diguanylate cyclase, GGDEF domain CE462_14055 PF00271 Helicase conserved C-terminal domain CE462_14055 PF00270 DEAD/DEAH box helicase CE462_14055 PF03880 DbpA RNA binding domain CE462_14060 PF03061 Thioesterase superfamily CE462_14070 PF02913 FAD linked oxidases, C-terminal domain CE462_14070 PF13183 4Fe-4S dicluster domain CE462_14070 PF01565 FAD binding domain CE462_14080 PF03741 Integral membrane protein TerC family CE462_14080 PF03471 Transporter associated domain CE462_14085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CE462_14095 PF13344 Haloacid dehalogenase-like hydrolase CE462_14100 PF00999 Sodium/hydrogen exchanger family CE462_14100 PF02254 TrkA-N domain CE462_14110 PF13537 Glutamine amidotransferase domain CE462_14110 PF00733 Asparagine synthase CE462_14115 PF03577 Peptidase family C69 CE462_14135 PF13417 Glutathione S-transferase, N-terminal domain CE462_14135 PF00043 Glutathione S-transferase, C-terminal domain CE462_14140 PF02798 Glutathione S-transferase, N-terminal domain CE462_14140 PF14497 Glutathione S-transferase, C-terminal domain CE462_14155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE462_14165 PF00849 RNA pseudouridylate synthase CE462_14185 PF08447 PAS fold CE462_14185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_14195 PF01027 Inhibitor of apoptosis-promoting Bax1 CE462_14200 PF12805 FUSC-like inner membrane protein yccS CE462_14205 PF04358 DsrC like protein CE462_14210 PF05036 Sporulation related domain CE462_14215 PF08245 Mur ligase middle domain CE462_14215 PF02875 Mur ligase family, glutamate ligase domain CE462_14220 PF17848 Acetyl-coA carboxylase zinc finger domain CE462_14220 PF01039 Carboxyl transferase domain CE462_14225 PF01416 tRNA pseudouridine synthase CE462_14235 PF01118 Semialdehyde dehydrogenase, NAD binding domain CE462_14235 PF02774 Semialdehyde dehydrogenase, dimerisation domain CE462_14240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE462_14240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE462_14240 PF11890 Domain of unknown function (DUF3410) CE462_14245 PF01569 PAP2 superfamily CE462_14250 PF03180 NLPA lipoprotein CE462_14275 PF01609 Transposase DDE domain CE462_14275 PF13808 DDE_Tnp_1-associated CE462_14290 PF01483 Proprotein convertase P-domain CE462_14290 PF00082 Subtilase family CE462_14300 PF14310 Fibronectin type III-like domain CE462_14300 PF00933 Glycosyl hydrolase family 3 N terminal domain CE462_14300 PF01915 Glycosyl hydrolase family 3 C-terminal domain CE462_14310 PF00391 PEP-utilising enzyme, mobile domain CE462_14310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CE462_14310 PF02896 PEP-utilising enzyme, TIM barrel domain CE462_14315 PF03618 Kinase/pyrophosphorylase CE462_14335 PF00324 Amino acid permease CE462_14370 PF03239 Iron permease FTR1 family CE462_14375 PF01593 Flavin containing amine oxidoreductase CE462_14395 PF07690 Major Facilitator Superfamily CE462_14410 PF00005 ABC transporter CE462_14430 PF02308 MgtC family CE462_14480 PF01625 Peptide methionine sulfoxide reductase CE462_14485 PF00583 Acetyltransferase (GNAT) family CE462_14485 PF00696 Amino acid kinase family CE462_14490 PF01842 ACT domain CE462_14490 PF00696 Amino acid kinase family CE462_14500 PF00884 Sulfatase CE462_14505 PF17676 LD-carboxypeptidase C-terminal domain CE462_14505 PF02016 LD-carboxypeptidase N-terminal domain CE462_14515 PF01906 Putative heavy-metal-binding CE462_14520 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_14560 PF00376 MerR family regulatory protein CE462_14560 PF09278 MerR, DNA binding CE462_14575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CE462_14575 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_14580 PF01645 Conserved region in glutamate synthase CE462_14580 PF01493 GXGXG motif CE462_14580 PF04898 Glutamate synthase central domain CE462_14580 PF00310 Glutamine amidotransferases class-II CE462_14585 PF01609 Transposase DDE domain CE462_14585 PF13808 DDE_Tnp_1-associated CE462_14625 PF00270 DEAD/DEAH box helicase CE462_14625 PF00271 Helicase conserved C-terminal domain CE462_14630 PF13302 Acetyltransferase (GNAT) domain CE462_14645 PF08378 Nuclease-related domain CE462_14655 PF07759 Protein of unknown function (DUF1615) CE462_14660 PF08502 LeuA allosteric (dimerisation) domain CE462_14660 PF00682 HMGL-like CE462_14665 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CE462_14665 PF02142 MGS-like domain CE462_14665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CE462_14670 PF00117 Glutamine amidotransferase class-I CE462_14670 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CE462_14675 PF05173 Dihydrodipicolinate reductase, C-terminus CE462_14675 PF01113 Dihydrodipicolinate reductase, N-terminus CE462_14690 PF01812 5-formyltetrahydrofolate cyclo-ligase family CE462_14695 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CE462_14700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE462_14700 PF01842 ACT domain CE462_14700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE462_14705 PF01219 Prokaryotic diacylglycerol kinase CE462_14710 PF00793 DAHP synthetase I family CE462_14715 PF00005 ABC transporter CE462_14720 PF01032 FecCD transport family CE462_14725 PF01627 Hpt domain CE462_14725 PF00512 His Kinase A (phospho-acceptor) domain CE462_14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_14725 PF00989 PAS fold CE462_14725 PF00072 Response regulator receiver domain CE462_14725 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_14735 PF00437 Type II/IV secretion system protein CE462_14740 PF00483 Nucleotidyl transferase CE462_14755 PF07664 Ferrous iron transport protein B C terminus CE462_14755 PF02421 Ferrous iron transport protein B CE462_14755 PF07670 Nucleoside recognition CE462_14765 PF01253 Translation initiation factor SUI1 CE462_14770 PF01169 Uncharacterized protein family UPF0016 CE462_14800 PF00990 Diguanylate cyclase, GGDEF domain CE462_14800 PF13185 GAF domain CE462_14820 PF13358 DDE superfamily endonuclease CE462_14820 PF13592 Winged helix-turn helix CE462_14825 PF01406 tRNA synthetases class I (C) catalytic domain CE462_14825 PF09190 DALR domain CE462_14830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CE462_14840 PF00149 Calcineurin-like phosphoesterase CE462_14845 PF04226 Transglycosylase associated protein CE462_14860 PF03466 LysR substrate binding domain CE462_14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_14880 PF01066 CDP-alcohol phosphatidyltransferase CE462_14885 PF08459 UvrC Helix-hairpin-helix N-terminal CE462_14885 PF02151 UvrB/uvrC motif CE462_14885 PF01541 GIY-YIG catalytic domain CE462_14890 PF00196 Bacterial regulatory proteins, luxR family CE462_14890 PF00072 Response regulator receiver domain CE462_14895 PF02348 Cytidylyltransferase CE462_14900 PF03966 Trm112p-like protein CE462_14905 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CE462_14910 PF00005 ABC transporter CE462_14910 PF00664 ABC transporter transmembrane region CE462_14915 PF03772 Competence protein CE462_14915 PF00753 Metallo-beta-lactamase superfamily CE462_14930 PF05872 Bacterial protein of unknown function (DUF853) CE462_14935 PF00155 Aminotransferase class I and II CE462_14945 PF13609 Gram-negative porin CE462_14950 PF13307 Helicase C-terminal domain CE462_14950 PF06733 DEAD_2 CE462_14965 PF01926 50S ribosome-binding GTPase CE462_14970 PF00245 Alkaline phosphatase CE462_14975 PF00245 Alkaline phosphatase CE462_14990 PF01272 Transcription elongation factor, GreA/GreB, C-term CE462_14990 PF14760 Rnk N-terminus CE462_14995 PF00072 Response regulator receiver domain CE462_14995 PF00196 Bacterial regulatory proteins, luxR family CE462_15000 PF07730 Histidine kinase CE462_15000 PF05231 MASE1 CE462_15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_15005 PF07690 Major Facilitator Superfamily CE462_15010 PF08448 PAS fold CE462_15010 PF00990 Diguanylate cyclase, GGDEF domain CE462_15015 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_15020 PF00528 Binding-protein-dependent transport system inner membrane component CE462_15025 PF00005 ABC transporter CE462_15030 PF04116 Fatty acid hydroxylase superfamily CE462_15035 PF13520 Amino acid permease CE462_15050 PF00571 CBS domain CE462_15050 PF03471 Transporter associated domain CE462_15050 PF01595 Cyclin M transmembrane N-terminal domain CE462_15055 PF01895 PhoU domain CE462_15065 PF00528 Binding-protein-dependent transport system inner membrane component CE462_15070 PF00528 Binding-protein-dependent transport system inner membrane component CE462_15075 PF14437 MafB19-like deaminase CE462_15085 PF01274 Malate synthase CE462_15090 PF00463 Isocitrate lyase family CE462_15095 PF00308 Bacterial dnaA protein CE462_15110 PF00586 AIR synthase related protein, N-terminal domain CE462_15110 PF02769 AIR synthase related protein, C-terminal domain CE462_15115 PF00551 Formyl transferase CE462_15120 PF01784 NIF3 (NGG1p interacting factor 3) CE462_15125 PF02954 Bacterial regulatory protein, Fis family CE462_15125 PF00158 Sigma-54 interaction domain CE462_15130 PF00512 His Kinase A (phospho-acceptor) domain CE462_15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_15130 PF00989 PAS fold CE462_15150 PF02503 Polyphosphate kinase middle domain CE462_15150 PF13090 Polyphosphate kinase C-terminal domain 2 CE462_15150 PF13089 Polyphosphate kinase N-terminal domain CE462_15150 PF17941 Polyphosphate kinase C-terminal domain 1 CE462_15155 PF02541 Ppx/GppA phosphatase family CE462_15160 PF03448 MgtE intracellular N domain CE462_15160 PF00571 CBS domain CE462_15160 PF01769 Divalent cation transporter CE462_15180 PF10135 Rod binding protein CE462_15180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CE462_15190 PF02107 Flagellar L-ring protein CE462_15195 PF00460 Flagella basal body rod protein CE462_15195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_15200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_15200 PF00460 Flagella basal body rod protein CE462_15205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_15205 PF07559 Flagellar basal body protein FlaE CE462_15205 PF00460 Flagella basal body rod protein CE462_15215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE462_15215 PF00460 Flagella basal body rod protein CE462_15220 PF00460 Flagella basal body rod protein CE462_15225 PF03705 CheR methyltransferase, all-alpha domain CE462_15225 PF01739 CheR methyltransferase, SAM binding domain CE462_15230 PF01584 CheW-like domain CE462_15230 PF00072 Response regulator receiver domain CE462_15250 PF12850 Calcineurin-like phosphoesterase superfamily domain CE462_15255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_15265 PF00849 RNA pseudouridylate synthase CE462_15265 PF01479 S4 domain CE462_15270 PF01966 HD domain CE462_15270 PF11871 Domain of unknown function (DUF3391) CE462_15285 PF00892 EamA-like transporter family CE462_15325 PF00313 'Cold-shock' DNA-binding domain CE462_15350 PF02779 Transketolase, pyrimidine binding domain CE462_15350 PF02780 Transketolase, C-terminal domain CE462_15355 PF00676 Dehydrogenase E1 component CE462_15360 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CE462_15370 PF05472 DNA replication terminus site-binding protein (Ter protein) CE462_15375 PF00176 SNF2 family N-terminal domain CE462_15375 PF00271 Helicase conserved C-terminal domain CE462_15375 PF04434 SWIM zinc finger CE462_15380 PF04337 Protein of unknown function, DUF480 CE462_15395 PF01609 Transposase DDE domain CE462_15395 PF13808 DDE_Tnp_1-associated CE462_15410 PF02719 Polysaccharide biosynthesis protein CE462_15415 PF00953 Glycosyl transferase family 4 CE462_15420 PF01370 NAD dependent epimerase/dehydratase family CE462_15430 PF13808 DDE_Tnp_1-associated CE462_15430 PF01609 Transposase DDE domain CE462_15445 PF03600 Citrate transporter CE462_15445 PF02080 TrkA-C domain CE462_15450 PF13808 DDE_Tnp_1-associated CE462_15450 PF01609 Transposase DDE domain CE462_15470 PF02350 UDP-N-acetylglucosamine 2-epimerase CE462_15485 PF00005 ABC transporter CE462_15495 PF03958 Bacterial type II/III secretion system short domain CE462_15495 PF00263 Bacterial type II and III secretion system protein CE462_15525 PF08334 Type II secretion system (T2SS), protein G CE462_15525 PF07963 Prokaryotic N-terminal methylation motif CE462_15530 PF00482 Type II secretion system (T2SS), protein F CE462_15535 PF00437 Type II/IV secretion system protein CE462_15535 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CE462_15545 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CE462_15550 PF00483 Nucleotidyl transferase CE462_15555 PF04321 RmlD substrate binding domain CE462_15560 PF16363 GDP-mannose 4,6 dehydratase CE462_15565 PF02321 Outer membrane efflux protein CE462_15580 PF00440 Bacterial regulatory proteins, tetR family CE462_15580 PF08361 MAATS-type transcriptional repressor, C-terminal region CE462_15600 PF00849 RNA pseudouridylate synthase CE462_15600 PF01479 S4 domain CE462_15605 PF04079 Segregation and condensation complex subunit ScpB CE462_15610 PF02616 Segregation and condensation protein ScpA CE462_15615 PF01300 Telomere recombination CE462_15620 PF02811 PHP domain CE462_15625 PF00425 chorismate binding enzyme CE462_15625 PF04715 Anthranilate synthase component I, N terminal region CE462_15630 PF00117 Glutamine amidotransferase class-I CE462_15630 PF02885 Glycosyl transferase family, helical bundle domain CE462_15630 PF00591 Glycosyl transferase family, a/b domain CE462_15635 PF02885 Glycosyl transferase family, helical bundle domain CE462_15635 PF00591 Glycosyl transferase family, a/b domain CE462_15640 PF00218 Indole-3-glycerol phosphate synthase CE462_15640 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CE462_15645 PF00291 Pyridoxal-phosphate dependent enzyme CE462_15650 PF00290 Tryptophan synthase alpha chain CE462_15705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE462_15705 PF02378 Phosphotransferase system, EIIC CE462_15705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE462_15715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE462_15725 PF00849 RNA pseudouridylate synthase CE462_15730 PF00293 NUDIX domain CE462_15740 PF04356 Protein of unknown function (DUF489) CE462_15745 PF00206 Lyase CE462_15745 PF08328 Adenylosuccinate lyase C-terminal CE462_15750 PF08007 Cupin superfamily protein CE462_15800 PF13417 Glutathione S-transferase, N-terminal domain CE462_15805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CE462_15805 PF01243 Pyridoxamine 5'-phosphate oxidase CE462_15820 PF01189 16S rRNA methyltransferase RsmB/F CE462_15820 PF01029 NusB family CE462_15825 PF00462 Glutaredoxin CE462_15830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CE462_15830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CE462_15835 PF04333 MlaA lipoprotein CE462_15845 PF03918 Cytochrome C biogenesis protein CE462_15850 PF08534 Redoxin CE462_15855 PF01578 Cytochrome C assembly protein CE462_15855 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CE462_15860 PF03100 CcmE CE462_15865 PF04995 Heme exporter protein D (CcmD) CE462_15870 PF01578 Cytochrome C assembly protein CE462_15875 PF03379 CcmB protein CE462_15880 PF00005 ABC transporter CE462_15890 PF01584 CheW-like domain CE462_15900 PF13614 AAA domain CE462_15905 PF13677 Membrane MotB of proton-channel complex MotA/MotB CE462_15905 PF00691 OmpA family CE462_15910 PF01618 MotA/TolQ/ExbB proton channel family CE462_15915 PF00072 Response regulator receiver domain CE462_15915 PF01339 CheB methylesterase CE462_15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_15920 PF01584 CheW-like domain CE462_15920 PF07194 P2 response regulator binding domain CE462_15920 PF02895 Signal transducing histidine kinase, homodimeric domain CE462_15920 PF01627 Hpt domain CE462_15925 PF13358 DDE superfamily endonuclease CE462_15925 PF13592 Winged helix-turn helix CE462_15930 PF03466 LysR substrate binding domain CE462_15930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_15935 PF07968 Leukocidin/Hemolysin toxin family CE462_15935 PF12563 Hemolytic toxin N terminal CE462_15940 PF00877 NlpC/P60 family CE462_15950 PF00171 Aldehyde dehydrogenase family CE462_15955 PF17932 Tetracyclin repressor-like, C-terminal domain CE462_15955 PF00440 Bacterial regulatory proteins, tetR family CE462_15965 PF00465 Iron-containing alcohol dehydrogenase CE462_15975 PF00291 Pyridoxal-phosphate dependent enzyme CE462_15990 PF00916 Sulfate permease family CE462_15990 PF01740 STAS domain CE462_15995 PF01554 MatE CE462_16005 PF04325 Protein of unknown function (DUF465) CE462_16010 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CE462_16010 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CE462_16010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE462_16010 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CE462_16010 PF10371 Domain of unknown function CE462_16015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CE462_16015 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_16015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CE462_16025 PF03476 MOSC N-terminal beta barrel domain CE462_16025 PF03473 MOSC domain CE462_16025 PF00111 2Fe-2S iron-sulfur cluster binding domain CE462_16025 PF00111 2Fe-2S iron-sulfur cluster binding domain CE462_16025 PF03473 MOSC domain CE462_16025 PF03476 MOSC N-terminal beta barrel domain CE462_16030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_16030 PF08447 PAS fold CE462_16030 PF13426 PAS domain CE462_16035 PF01435 Peptidase family M48 CE462_16045 PF12697 Alpha/beta hydrolase family CE462_16045 PF08241 Methyltransferase domain CE462_16050 PF00155 Aminotransferase class I and II CE462_16055 PF06968 Biotin and Thiamin Synthesis associated domain CE462_16055 PF04055 Radical SAM superfamily CE462_16060 PF00202 Aminotransferase class-III CE462_16075 PF01336 OB-fold nucleic acid binding domain CE462_16075 PF00152 tRNA synthetases class II (D, K and N) CE462_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_16095 PF03466 LysR substrate binding domain CE462_16100 PF03960 ArsC family CE462_16105 PF07687 Peptidase dimerisation domain CE462_16105 PF01546 Peptidase family M20/M25/M40 CE462_16110 PF02557 D-alanyl-D-alanine carboxypeptidase CE462_16120 PF00999 Sodium/hydrogen exchanger family CE462_16120 PF03471 Transporter associated domain CE462_16120 PF02080 TrkA-C domain CE462_16130 PF03471 Transporter associated domain CE462_16130 PF00999 Sodium/hydrogen exchanger family CE462_16130 PF02080 TrkA-C domain CE462_16140 PF13808 DDE_Tnp_1-associated CE462_16140 PF01609 Transposase DDE domain CE462_16145 PF00258 Flavodoxin CE462_16150 PF00849 RNA pseudouridylate synthase CE462_16155 PF04287 tRNA pseudouridine synthase C CE462_16180 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CE462_16185 PF07348 Syd protein (SUKH-2) CE462_16190 PF14489 QueF-like protein CE462_16190 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CE462_16200 PF00990 Diguanylate cyclase, GGDEF domain CE462_16200 PF07694 5TMR of 5TMR-LYT CE462_16205 PF11892 Domain of unknown function (DUF3412) CE462_16205 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CE462_16205 PF03641 Possible lysine decarboxylase CE462_16210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CE462_16210 PF01367 5'-3' exonuclease, C-terminal SAM fold CE462_16215 PF18324 Hypothetical protein TT1725 CE462_16215 PF00180 Isocitrate/isopropylmalate dehydrogenase CE462_16225 PF18125 RlmM ferredoxin-like domain CE462_16225 PF01728 FtsJ-like methyltransferase CE462_16230 PF04241 Protein of unknown function (DUF423) CE462_16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_16240 PF03466 LysR substrate binding domain CE462_16245 PF00672 HAMP domain CE462_16245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_16250 PF00817 impB/mucB/samB family CE462_16250 PF11798 IMS family HHH motif CE462_16250 PF11799 impB/mucB/samB family C-terminal domain CE462_16265 PF02424 ApbE family CE462_16270 PF00175 Oxidoreductase NAD-binding domain CE462_16270 PF00970 Oxidoreductase FAD-binding domain CE462_16270 PF00111 2Fe-2S iron-sulfur cluster binding domain CE462_16275 PF02508 Rnf-Nqr subunit, membrane protein CE462_16280 PF02508 Rnf-Nqr subunit, membrane protein CE462_16285 PF04205 FMN-binding domain CE462_16290 PF03116 NQR2, RnfD, RnfE family CE462_16295 PF11973 NQRA C-terminal domain CE462_16295 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CE462_16300 PF01722 BolA-like protein CE462_16305 PF05175 Methyltransferase small domain CE462_16315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CE462_16325 PF07690 Major Facilitator Superfamily CE462_16330 PF03502 Nucleoside-specific channel-forming protein, Tsx CE462_16335 PF04461 Protein of unknown function (DUF520) CE462_16340 PF08546 Ketopantoate reductase PanE/ApbA C terminal CE462_16340 PF02558 Ketopantoate reductase PanE/ApbA CE462_16345 PF01965 DJ-1/PfpI family CE462_16350 PF00205 Thiamine pyrophosphate enzyme, central domain CE462_16350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE462_16350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CE462_16355 PF03306 Alpha-acetolactate decarboxylase CE462_16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_16360 PF03466 LysR substrate binding domain CE462_16365 PF06165 Glycosyltransferase family 36 CE462_16365 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CE462_16365 PF10091 Putative glucoamylase CE462_16380 PF06965 Na+/H+ antiporter 1 CE462_16380 PF13462 Thioredoxin CE462_16385 PF16363 GDP-mannose 4,6 dehydratase CE462_16390 PF00111 2Fe-2S iron-sulfur cluster binding domain CE462_16390 PF00175 Oxidoreductase NAD-binding domain CE462_16390 PF00970 Oxidoreductase FAD-binding domain CE462_16395 PF03063 Prismane/CO dehydrogenase family CE462_16400 PF00210 Ferritin-like domain CE462_16440 PF00106 short chain dehydrogenase CE462_16450 PF03441 FAD binding domain of DNA photolyase CE462_16450 PF00875 DNA photolyase CE462_16455 PF13411 MerR HTH family regulatory protein CE462_16460 PF08349 Protein of unknown function (DUF1722) CE462_16490 PF00800 Prephenate dehydratase CE462_16490 PF01817 Chorismate mutase type II CE462_16515 PF07995 Glucose / Sorbosone dehydrogenase CE462_16530 PF03573 outer membrane porin, OprD family CE462_16540 PF00106 short chain dehydrogenase CE462_16565 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CE462_16575 PF00730 HhH-GPD superfamily base excision DNA repair protein CE462_16575 PF12833 Helix-turn-helix domain CE462_16575 PF02805 Metal binding domain of Ada CE462_16575 PF06029 AlkA N-terminal domain CE462_16580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CE462_16580 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CE462_16585 PF01209 ubiE/COQ5 methyltransferase family CE462_16590 PF06906 Protein of unknown function (DUF1272) CE462_16605 PF01810 LysE type translocator CE462_16610 PF03466 LysR substrate binding domain CE462_16610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_16615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CE462_16615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CE462_16640 PF12729 Four helix bundle sensory module for signal transduction CE462_16640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_16640 PF00672 HAMP domain CE462_16645 PF01584 CheW-like domain CE462_16650 PF02203 Tar ligand binding domain homologue CE462_16650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_16650 PF00672 HAMP domain CE462_16655 PF03705 CheR methyltransferase, all-alpha domain CE462_16655 PF01739 CheR methyltransferase, SAM binding domain CE462_16680 PF01609 Transposase DDE domain CE462_16680 PF13808 DDE_Tnp_1-associated CE462_16685 PF07883 Cupin domain CE462_16685 PF12833 Helix-turn-helix domain CE462_16695 PF01266 FAD dependent oxidoreductase CE462_16700 PF07883 Cupin domain CE462_16700 PF01381 Helix-turn-helix CE462_16705 PF00171 Aldehyde dehydrogenase family CE462_16710 PF00202 Aminotransferase class-III CE462_16715 PF00324 Amino acid permease CE462_16725 PF00324 Amino acid permease CE462_16730 PF02690 Na+/Pi-cotransporter CE462_16735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE462_16735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CE462_16740 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CE462_16755 PF01048 Phosphorylase superfamily CE462_16780 PF00291 Pyridoxal-phosphate dependent enzyme CE462_16780 PF14821 Threonine synthase N terminus CE462_16785 PF00288 GHMP kinases N terminal domain CE462_16785 PF08544 GHMP kinases C terminal CE462_16790 PF00696 Amino acid kinase family CE462_16790 PF01842 ACT domain CE462_16790 PF13840 ACT domain CE462_16790 PF00742 Homoserine dehydrogenase CE462_16790 PF03447 Homoserine dehydrogenase, NAD binding domain CE462_16795 PF00588 SpoU rRNA Methylase family CE462_16800 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CE462_16815 PF03737 Aldolase/RraA CE462_16825 PF00072 Response regulator receiver domain CE462_16825 PF00486 Transcriptional regulatory protein, C terminal CE462_16840 PF00664 ABC transporter transmembrane region CE462_16840 PF00005 ABC transporter CE462_16845 PF00005 ABC transporter CE462_16845 PF00664 ABC transporter transmembrane region CE462_16865 PF18389 TrmO C-terminal domain CE462_16865 PF01980 tRNA-methyltransferase O CE462_16870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CE462_16870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CE462_16885 PF00291 Pyridoxal-phosphate dependent enzyme CE462_16890 PF00381 PTS HPr component phosphorylation site CE462_16895 PF05524 PEP-utilising enzyme, N-terminal CE462_16895 PF00391 PEP-utilising enzyme, mobile domain CE462_16895 PF02896 PEP-utilising enzyme, TIM barrel domain CE462_16900 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CE462_16905 PF08448 PAS fold CE462_16905 PF00990 Diguanylate cyclase, GGDEF domain CE462_16915 PF01292 Prokaryotic cytochrome b561 CE462_16925 PF13808 DDE_Tnp_1-associated CE462_16925 PF01609 Transposase DDE domain CE462_16935 PF13476 AAA domain CE462_16940 PF12320 Type 5 capsule protein repressor C-terminal domain CE462_16940 PF00149 Calcineurin-like phosphoesterase CE462_16950 PF04381 Putative exonuclease, RdgC CE462_16960 PF00999 Sodium/hydrogen exchanger family CE462_16960 PF02254 TrkA-N domain CE462_16965 PF02254 TrkA-N domain CE462_16965 PF00999 Sodium/hydrogen exchanger family CE462_16970 PF04389 Peptidase family M28 CE462_16970 PF04151 Bacterial pre-peptidase C-terminal domain CE462_16980 PF00224 Pyruvate kinase, barrel domain CE462_16980 PF02887 Pyruvate kinase, alpha/beta domain CE462_16985 PF12795 Mechanosensitive ion channel porin domain CE462_16985 PF00924 Mechanosensitive ion channel CE462_16985 PF12794 Mechanosensitive ion channel inner membrane domain 1 CE462_16990 PF13356 Arm DNA-binding domain CE462_16990 PF00589 Phage integrase family CE462_17005 PF01047 MarR family CE462_17010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE462_17010 PF00529 HlyD membrane-fusion protein of T1SS CE462_17030 PF01679 Proteolipid membrane potential modulator CE462_17045 PF13597 Anaerobic ribonucleoside-triphosphate reductase CE462_17045 PF03477 ATP cone domain CE462_17055 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CE462_17055 PF00533 BRCA1 C Terminus (BRCT) domain CE462_17055 PF01653 NAD-dependent DNA ligase adenylation domain CE462_17055 PF03120 NAD-dependent DNA ligase OB-fold domain CE462_17055 PF12826 Helix-hairpin-helix motif CE462_17060 PF04354 ZipA, C-terminal FtsZ-binding domain CE462_17065 PF02463 RecF/RecN/SMC N terminal domain CE462_17065 PF06470 SMC proteins Flexible Hinge Domain CE462_17075 PF03458 UPF0126 domain CE462_17085 PF05951 Bacterial protein of unknown function (DUF882) CE462_17090 PF01471 Putative peptidoglycan binding domain CE462_17090 PF03734 L,D-transpeptidase catalytic domain CE462_17105 PF00535 Glycosyl transferase family 2 CE462_17125 PF00579 tRNA synthetases class I (W and Y) CE462_17130 PF01551 Peptidase family M23 CE462_17130 PF01476 LysM domain CE462_17130 PF08525 Opacity-associated protein A N-terminal motif CE462_17135 PF03702 Anhydro-N-acetylmuramic acid kinase CE462_17140 PF01042 Endoribonuclease L-PSP CE462_17155 PF13808 DDE_Tnp_1-associated CE462_17155 PF01609 Transposase DDE domain CE462_17160 PF00456 Transketolase, thiamine diphosphate binding domain CE462_17160 PF02779 Transketolase, pyrimidine binding domain CE462_17160 PF02780 Transketolase, C-terminal domain CE462_17165 PF00438 S-adenosylmethionine synthetase, N-terminal domain CE462_17165 PF02772 S-adenosylmethionine synthetase, central domain CE462_17165 PF02773 S-adenosylmethionine synthetase, C-terminal domain CE462_17170 PF10263 SprT-like family CE462_17170 PF17283 SprT-like zinc ribbon domain CE462_17175 PF04231 Endonuclease I CE462_17180 PF04452 RNA methyltransferase CE462_17185 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CE462_17185 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CE462_17200 PF13358 DDE superfamily endonuclease CE462_17200 PF13592 Winged helix-turn helix CE462_17205 PF02622 Uncharacterized ACR, COG1678 CE462_17210 PF03652 Holliday junction resolvase CE462_17215 PF03466 LysR substrate binding domain CE462_17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_17220 PF07690 Major Facilitator Superfamily CE462_17225 PF00144 Beta-lactamase CE462_17230 PF07726 ATPase family associated with various cellular activities (AAA) CE462_17230 PF17863 AAA lid domain CE462_17240 PF11992 Domain of unknown function (DUF3488) CE462_17240 PF13559 Domain of unknown function (DUF4129) CE462_17240 PF01841 Transglutaminase-like superfamily CE462_17245 PF01235 Sodium:alanine symporter family CE462_17250 PF00923 Transaldolase/Fructose-6-phosphate aldolase CE462_17265 PF03167 Uracil DNA glycosylase superfamily CE462_17275 PF13592 Winged helix-turn helix CE462_17275 PF13358 DDE superfamily endonuclease CE462_17280 PF01228 Glycine radical CE462_17300 PF00793 DAHP synthetase I family CE462_17305 PF13369 Transglutaminase-like superfamily CE462_17315 PF17827 PrmC N-terminal domain CE462_17315 PF13847 Methyltransferase domain CE462_17320 PF00472 RF-1 domain CE462_17320 PF03462 PCRF domain CE462_17325 PF01488 Shikimate / quinate 5-dehydrogenase CE462_17325 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CE462_17325 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CE462_17330 PF03550 Outer membrane lipoprotein LolB CE462_17335 PF08544 GHMP kinases C terminal CE462_17335 PF00288 GHMP kinases N terminal domain CE462_17345 PF14572 Phosphoribosyl synthetase-associated domain CE462_17345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CE462_17350 PF02872 5'-nucleotidase, C-terminal domain CE462_17350 PF00149 Calcineurin-like phosphoesterase CE462_17355 PF01195 Peptidyl-tRNA hydrolase CE462_17360 PF01926 50S ribosome-binding GTPase CE462_17360 PF06071 Protein of unknown function (DUF933) CE462_17405 PF02080 TrkA-C domain CE462_17405 PF03600 Citrate transporter CE462_17410 PF04973 Nicotinamide mononucleotide transporter CE462_17415 PF01048 Phosphorylase superfamily CE462_17430 PF07859 alpha/beta hydrolase fold CE462_17450 PF00012 Hsp70 protein CE462_17465 PF00128 Alpha amylase, catalytic domain CE462_17465 PF16657 Maltogenic Amylase, C-terminal domain CE462_17480 PF00005 ABC transporter CE462_17480 PF12848 ABC transporter CE462_17485 PF07690 Major Facilitator Superfamily CE462_17500 PF13419 Haloacid dehalogenase-like hydrolase CE462_17510 PF00171 Aldehyde dehydrogenase family CE462_17515 PF04958 Arginine N-succinyltransferase beta subunit CE462_17520 PF00202 Aminotransferase class-III CE462_17525 PF00117 Glutamine amidotransferase class-I CE462_17535 PF00579 tRNA synthetases class I (W and Y) CE462_17540 PF13419 Haloacid dehalogenase-like hydrolase CE462_17545 PF00834 Ribulose-phosphate 3 epimerase family CE462_17550 PF02086 D12 class N6 adenine-specific DNA methyltransferase CE462_17560 PF01761 3-dehydroquinate synthase CE462_17565 PF01202 Shikimate kinase CE462_17595 PF17092 Penicillin-binding protein OB-like domain CE462_17595 PF00912 Transglycosylase CE462_17595 PF00905 Penicillin binding protein transpeptidase domain CE462_17600 PF03466 LysR substrate binding domain CE462_17600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_17605 PF17200 Single Cache domain 2 CE462_17605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_17605 PF00672 HAMP domain CE462_17620 PF03466 LysR substrate binding domain CE462_17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_17635 PF08525 Opacity-associated protein A N-terminal motif CE462_17635 PF01551 Peptidase family M23 CE462_17635 PF01476 LysM domain CE462_17665 PF03009 Glycerophosphoryl diester phosphodiesterase family CE462_17670 PF02743 Cache domain CE462_17670 PF00672 HAMP domain CE462_17670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_17675 PF02910 Fumarate reductase flavoprotein C-term CE462_17675 PF00890 FAD binding domain CE462_17680 PF13183 4Fe-4S dicluster domain CE462_17680 PF13085 2Fe-2S iron-sulfur cluster binding domain CE462_17685 PF02300 Fumarate reductase subunit C CE462_17690 PF02313 Fumarate reductase subunit D CE462_17710 PF06224 Winged helix DNA-binding domain CE462_17725 PF00501 AMP-binding enzyme CE462_17745 PF00072 Response regulator receiver domain CE462_17745 PF00486 Transcriptional regulatory protein, C terminal CE462_17750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_17750 PF00512 His Kinase A (phospho-acceptor) domain CE462_17750 PF08521 Two-component sensor kinase N-terminal CE462_17760 PF00478 IMP dehydrogenase / GMP reductase domain CE462_17770 PF01132 Elongation factor P (EF-P) OB domain CE462_17770 PF09285 Elongation factor P, C-terminal CE462_17770 PF08207 Elongation factor P (EF-P) KOW-like domain CE462_17780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE462_17780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE462_17800 PF13419 Haloacid dehalogenase-like hydrolase CE462_17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_17810 PF03466 LysR substrate binding domain CE462_17815 PF05230 MASE2 domain CE462_17815 PF00990 Diguanylate cyclase, GGDEF domain CE462_17820 PF00313 'Cold-shock' DNA-binding domain CE462_17825 PF01494 FAD binding domain CE462_17830 PF01938 TRAM domain CE462_17830 PF04055 Radical SAM superfamily CE462_17830 PF00919 Uncharacterized protein family UPF0004 CE462_17835 PF02562 PhoH-like protein CE462_17840 PF02130 Uncharacterized protein family UPF0054 CE462_17845 PF03471 Transporter associated domain CE462_17845 PF00571 CBS domain CE462_17850 PF00795 Carbon-nitrogen hydrolase CE462_17855 PF07295 Zinc-ribbon containing domain CE462_17860 PF08264 Anticodon-binding domain of tRNA CE462_17860 PF00133 tRNA synthetases class I (I, L, M and V) CE462_17860 PF13603 Leucyl-tRNA synthetase, Domain 2 CE462_17880 PF01467 Cytidylyltransferase-like CE462_17890 PF02590 Predicted SPOUT methyltransferase CE462_17895 PF00905 Penicillin binding protein transpeptidase domain CE462_17895 PF03717 Penicillin-binding Protein dimerisation domain CE462_17900 PF01098 Cell cycle protein CE462_17905 PF13406 Transglycosylase SLT domain CE462_17910 PF05036 Sporulation related domain CE462_17910 PF03330 Lytic transglycolase CE462_17915 PF00768 D-alanyl-D-alanine carboxypeptidase CE462_17915 PF07943 Penicillin-binding protein 5, C-terminal domain CE462_17920 PF04359 Protein of unknown function (DUF493) CE462_17925 PF03099 Biotin/lipoate A/B protein ligase family CE462_17935 PF04055 Radical SAM superfamily CE462_17935 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CE462_17950 PF13302 Acetyltransferase (GNAT) domain CE462_17955 PF06821 Serine hydrolase CE462_17960 PF02508 Rnf-Nqr subunit, membrane protein CE462_17970 PF01368 DHH family CE462_17970 PF02272 DHHA1 domain CE462_17970 PF17768 RecJ OB domain CE462_17980 PF01741 Large-conductance mechanosensitive channel, MscL CE462_17985 PF17158 Membrane-associated sensor, integral membrane domain CE462_17985 PF00990 Diguanylate cyclase, GGDEF domain CE462_17990 PF02899 Phage integrase, N-terminal SAM-like domain CE462_17990 PF00589 Phage integrase family CE462_17995 PF00258 Flavodoxin CE462_18000 PF01523 Putative modulator of DNA gyrase CE462_18005 PF01523 Putative modulator of DNA gyrase CE462_18015 PF03734 L,D-transpeptidase catalytic domain CE462_18015 PF17969 L,D-transpeptidase C-terminal domain CE462_18025 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CE462_18050 PF13808 DDE_Tnp_1-associated CE462_18050 PF01609 Transposase DDE domain CE462_18055 PF03575 Peptidase family S51 CE462_18065 PF06476 Protein of unknown function (DUF1090) CE462_18070 PF02635 DsrE/DsrF-like family CE462_18075 PF00990 Diguanylate cyclase, GGDEF domain CE462_18080 PF07690 Major Facilitator Superfamily CE462_18085 PF00013 KH domain CE462_18085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CE462_18085 PF01138 3' exoribonuclease family, domain 1 CE462_18085 PF03725 3' exoribonuclease family, domain 2 CE462_18085 PF00575 S1 RNA binding domain CE462_18090 PF00312 Ribosomal protein S15 CE462_18095 PF01509 TruB family pseudouridylate synthase (N terminal domain) CE462_18095 PF09157 Pseudouridine synthase II TruB, C-terminal CE462_18095 PF16198 tRNA pseudouridylate synthase B C-terminal domain CE462_18100 PF02033 Ribosome-binding factor A CE462_18105 PF04760 Translation initiation factor IF-2, N-terminal region CE462_18105 PF00009 Elongation factor Tu GTP binding domain CE462_18105 PF11987 Translation-initiation factor 2 CE462_18105 PF08364 Bacterial translation initiation factor IF-2 associated region CE462_18110 PF00575 S1 RNA binding domain CE462_18110 PF13184 NusA-like KH domain CE462_18110 PF08529 NusA N-terminal domain CE462_18115 PF02576 RimP N-terminal domain CE462_18115 PF17384 RimP C-terminal SH3 domain CE462_18130 PF03840 Preprotein translocase SecG subunit CE462_18135 PF00121 Triosephosphate isomerase CE462_18140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CE462_18140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CE462_18140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CE462_18140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CE462_18145 PF00809 Pterin binding enzyme CE462_18150 PF17862 AAA+ lid domain CE462_18150 PF01434 Peptidase family M41 CE462_18150 PF00004 ATPase family associated with various cellular activities (AAA) CE462_18150 PF06480 FtsH Extracellular CE462_18155 PF01728 FtsJ-like methyltransferase CE462_18160 PF01985 CRS1 / YhbY (CRM) domain CE462_18170 PF03449 Transcription elongation factor, N-terminal CE462_18170 PF01272 Transcription elongation factor, GreA/GreB, C-term CE462_18185 PF00691 OmpA family CE462_18185 PF13677 Membrane MotB of proton-channel complex MotA/MotB CE462_18190 PF01618 MotA/TolQ/ExbB proton channel family CE462_18195 PF02609 Exonuclease VII small subunit CE462_18200 PF00348 Polyprenyl synthetase CE462_18205 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CE462_18205 PF02779 Transketolase, pyrimidine binding domain CE462_18205 PF02780 Transketolase, C-terminal domain CE462_18210 PF12911 N-terminal TM domain of oligopeptide transport permease C CE462_18210 PF00528 Binding-protein-dependent transport system inner membrane component CE462_18220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_18225 PF00005 ABC transporter CE462_18225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_18230 PF04608 Phosphatidylglycerophosphatase A CE462_18235 PF00586 AIR synthase related protein, N-terminal domain CE462_18235 PF02769 AIR synthase related protein, C-terminal domain CE462_18240 PF01029 NusB family CE462_18245 PF00885 6,7-dimethyl-8-ribityllumazine synthase CE462_18250 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CE462_18250 PF00925 GTP cyclohydrolase II CE462_18255 PF00677 Lumazine binding domain CE462_18260 PF01872 RibD C-terminal domain CE462_18260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CE462_18265 PF03477 ATP cone domain CE462_18280 PF00464 Serine hydroxymethyltransferase CE462_18300 PF02613 Nitrate reductase delta subunit CE462_18320 PF00563 EAL domain CE462_18320 PF00990 Diguanylate cyclase, GGDEF domain CE462_18320 PF03707 Bacterial signalling protein N terminal repeat CE462_18330 PF13193 AMP-binding enzyme C-terminal domain CE462_18330 PF00501 AMP-binding enzyme CE462_18330 PF16177 Acetyl-coenzyme A synthetase N-terminus CE462_18335 PF01220 Dehydroquinase class II CE462_18340 PF00364 Biotin-requiring enzyme CE462_18345 PF02785 Biotin carboxylase C-terminal domain CE462_18345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CE462_18345 PF00289 Biotin carboxylase, N-terminal domain CE462_18350 PF06196 Protein of unknown function (DUF997) CE462_18355 PF00474 Sodium:solute symporter family CE462_18360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CE462_18360 PF00367 phosphotransferase system, EIIB CE462_18360 PF02378 Phosphotransferase system, EIIC CE462_18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_18365 PF03466 LysR substrate binding domain CE462_18370 PF08240 Alcohol dehydrogenase GroES-like domain CE462_18370 PF00107 Zinc-binding dehydrogenase CE462_18380 PF13520 Amino acid permease CE462_18385 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CE462_18390 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CE462_18395 PF01842 ACT domain CE462_18395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE462_18395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE462_18410 PF00881 Nitroreductase family CE462_18415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CE462_18415 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_18420 PF01343 Peptidase family S49 CE462_18435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CE462_18435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE462_18440 PF07023 Protein of unknown function (DUF1315) CE462_18445 PF00710 Asparaginase, N-terminal CE462_18445 PF17763 Glutaminase/Asparaginase C-terminal domain CE462_18450 PF03616 Sodium/glutamate symporter CE462_18455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_18455 PF02743 Cache domain CE462_18455 PF00672 HAMP domain CE462_18465 PF01336 OB-fold nucleic acid binding domain CE462_18465 PF00152 tRNA synthetases class II (D, K and N) CE462_18470 PF02567 Phenazine biosynthesis-like protein CE462_18475 PF00667 FAD binding domain CE462_18475 PF00175 Oxidoreductase NAD-binding domain CE462_18475 PF00258 Flavodoxin CE462_18480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CE462_18480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CE462_18485 PF01507 Phosphoadenosine phosphosulfate reductase family CE462_18490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CE462_18495 PF00528 Binding-protein-dependent transport system inner membrane component CE462_18500 PF00571 CBS domain CE462_18500 PF00005 ABC transporter CE462_18505 PF00186 Dihydrofolate reductase CE462_18510 PF12821 Threonine/Serine exporter, ThrE CE462_18515 PF06738 Putative threonine/serine exporter CE462_18525 PF13592 Winged helix-turn helix CE462_18525 PF13358 DDE superfamily endonuclease CE462_18530 PF00994 Probable molybdopterin binding domain CE462_18540 PF00109 Beta-ketoacyl synthase, N-terminal domain CE462_18540 PF02801 Beta-ketoacyl synthase, C-terminal domain CE462_18555 PF02801 Beta-ketoacyl synthase, C-terminal domain CE462_18555 PF00109 Beta-ketoacyl synthase, N-terminal domain CE462_18580 PF00221 Aromatic amino acid lyase CE462_18590 PF07977 FabA-like domain CE462_18595 PF00501 AMP-binding enzyme CE462_18595 PF13193 AMP-binding enzyme C-terminal domain CE462_18605 PF00550 Phosphopantetheine attachment site CE462_18610 PF00550 Phosphopantetheine attachment site CE462_18655 PF03150 Di-haem cytochrome c peroxidase CE462_18655 PF00034 Cytochrome c CE462_18660 PF01609 Transposase DDE domain CE462_18660 PF13808 DDE_Tnp_1-associated CE462_18665 PF00194 Eukaryotic-type carbonic anhydrase CE462_18670 PF04227 Indigoidine synthase A like protein CE462_18675 PF00294 pfkB family carbohydrate kinase CE462_18695 PF00582 Universal stress protein family CE462_18705 PF00171 Aldehyde dehydrogenase family CE462_18710 PF00696 Amino acid kinase family CE462_18710 PF01472 PUA domain CE462_18715 PF07417 Sigma factor-binding transcriptional regulator Crl CE462_18725 PF00156 Phosphoribosyl transferase domain CE462_18740 PF07687 Peptidase dimerisation domain CE462_18740 PF01546 Peptidase family M20/M25/M40 CE462_18750 PF00005 ABC transporter CE462_18750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_18755 PF00005 ABC transporter CE462_18755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE462_18760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_18765 PF12911 N-terminal TM domain of oligopeptide transport permease C CE462_18765 PF00528 Binding-protein-dependent transport system inner membrane component CE462_18785 PF01609 Transposase DDE domain CE462_18785 PF13808 DDE_Tnp_1-associated CE462_18800 PF01618 MotA/TolQ/ExbB proton channel family CE462_18805 PF01618 MotA/TolQ/ExbB proton channel family CE462_18810 PF02472 Biopolymer transport protein ExbD/TolR CE462_18825 PF00704 Glycosyl hydrolases family 18 CE462_18825 PF06483 Chitinase C CE462_18865 PF00749 tRNA synthetases class I (E and Q), catalytic domain CE462_18880 PF00313 'Cold-shock' DNA-binding domain CE462_18920 PF00929 Exonuclease CE462_18925 PF03193 RsgA GTPase CE462_18930 PF02666 Phosphatidylserine decarboxylase CE462_18935 PF09905 DNA-binding protein VF530 CE462_18955 PF03707 Bacterial signalling protein N terminal repeat CE462_18955 PF00563 EAL domain CE462_18955 PF00990 Diguanylate cyclase, GGDEF domain CE462_18960 PF06877 Regulator of ribonuclease activity B CE462_18965 PF00801 PKD domain CE462_18965 PF05547 Immune inhibitor A peptidase M6 CE462_18990 PF05199 GMC oxidoreductase CE462_18990 PF00732 GMC oxidoreductase CE462_18995 PF00171 Aldehyde dehydrogenase family CE462_19005 PF00561 alpha/beta hydrolase fold CE462_19010 PF00664 ABC transporter transmembrane region CE462_19010 PF00005 ABC transporter CE462_19015 PF06004 Bacterial protein of unknown function (DUF903) CE462_19020 PF00581 Rhodanese-like domain CE462_19025 PF04960 Glutaminase CE462_19030 PF04320 Protein with unknown function (DUF469) CE462_19035 PF02390 Putative methyltransferase CE462_19040 PF04389 Peptidase family M28 CE462_19040 PF01483 Proprotein convertase P-domain CE462_19045 PF00155 Aminotransferase class I and II CE462_19050 PF12792 CSS motif domain associated with EAL CE462_19050 PF00563 EAL domain CE462_19055 PF01370 NAD dependent epimerase/dehydratase family CE462_19055 PF08338 Domain of unknown function (DUF1731) CE462_19065 PF00005 ABC transporter CE462_19070 PF13472 GDSL-like Lipase/Acylhydrolase family CE462_19075 PF00072 Response regulator receiver domain CE462_19075 PF01584 CheW-like domain CE462_19085 PF06826 Predicted Permease Membrane Region CE462_19085 PF02080 TrkA-C domain CE462_19090 PF03006 Haemolysin-III related CE462_19095 PF00282 Pyridoxal-dependent decarboxylase conserved domain CE462_19100 PF04279 Intracellular septation protein A CE462_19105 PF03795 YCII-related domain CE462_19110 PF00459 Inositol monophosphatase family CE462_19120 PF00483 Nucleotidyl transferase CE462_19125 PF00854 POT family CE462_19130 PF00072 Response regulator receiver domain CE462_19160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE462_19165 PF02321 Outer membrane efflux protein CE462_19170 PF01207 Dihydrouridine synthase (Dus) CE462_19175 PF02954 Bacterial regulatory protein, Fis family CE462_19180 PF01810 LysE type translocator CE462_19220 PF00445 Ribonuclease T2 family CE462_19240 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CE462_19255 PF03466 LysR substrate binding domain CE462_19255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_19260 PF00270 DEAD/DEAH box helicase CE462_19260 PF00271 Helicase conserved C-terminal domain CE462_19270 PF00753 Metallo-beta-lactamase superfamily CE462_19290 PF09013 YopH, N-terminal CE462_19290 PF00102 Protein-tyrosine phosphatase CE462_19335 PF08774 VRR-NUC domain CE462_19335 PF04851 Type III restriction enzyme, res subunit CE462_19350 PF18273 Type III R-M EcoP15I C-terminal domain CE462_19350 PF01555 DNA methylase CE462_19360 PF00239 Resolvase, N terminal domain CE462_19360 PF02796 Helix-turn-helix domain of resolvase CE462_19380 PF01848 Hok/gef family CE462_19400 PF00589 Phage integrase family CE462_19400 PF13356 Arm DNA-binding domain CE462_19415 PF03739 Lipopolysaccharide export system permease LptF/LptG CE462_19420 PF03739 Lipopolysaccharide export system permease LptF/LptG CE462_19425 PF00883 Cytosol aminopeptidase family, catalytic domain CE462_19425 PF02789 Cytosol aminopeptidase family, N-terminal domain CE462_19430 PF04364 DNA polymerase III chi subunit, HolC CE462_19435 PF08264 Anticodon-binding domain of tRNA CE462_19435 PF00133 tRNA synthetases class I (I, L, M and V) CE462_19435 PF10458 Valyl tRNA synthetase tRNA binding arm CE462_19445 PF09335 SNARE associated Golgi protein CE462_19450 PF00768 D-alanyl-D-alanine carboxypeptidase CE462_19475 PF02599 Global regulator protein family CE462_19480 PF13840 ACT domain CE462_19480 PF01842 ACT domain CE462_19480 PF00696 Amino acid kinase family CE462_19485 PF01411 tRNA synthetases class II (A) CE462_19485 PF02272 DHHA1 domain CE462_19485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CE462_19490 PF02631 RecX family CE462_19495 PF00154 recA bacterial DNA recombination protein CE462_19500 PF02464 Competence-damaged protein CE462_19505 PF04073 Aminoacyl-tRNA editing domain CE462_19525 PF00392 Bacterial regulatory proteins, gntR family CE462_19525 PF00155 Aminotransferase class I and II CE462_19545 PF04172 LrgB-like family CE462_19560 PF00696 Amino acid kinase family CE462_19560 PF03447 Homoserine dehydrogenase, NAD binding domain CE462_19560 PF00742 Homoserine dehydrogenase CE462_19565 PF01053 Cys/Met metabolism PLP-dependent enzyme CE462_19570 PF01340 Met Apo-repressor, MetJ CE462_19575 PF12833 Helix-turn-helix domain CE462_19575 PF02311 AraC-like ligand binding domain CE462_19580 PF01588 Putative tRNA binding domain CE462_19585 PF03222 Tryptophan/tyrosine permease family CE462_19590 PF00459 Inositol monophosphatase family CE462_19595 PF00293 NUDIX domain CE462_19600 PF13419 Haloacid dehalogenase-like hydrolase CE462_19605 PF01479 S4 domain CE462_19605 PF00579 tRNA synthetases class I (W and Y) CE462_19610 PF00196 Bacterial regulatory proteins, luxR family CE462_19615 PF01203 Type II secretion system (T2SS), protein N CE462_19620 PF04612 Type II secretion system (T2SS), protein M CE462_19625 PF12693 GspL periplasmic domain CE462_19625 PF05134 Type II secretion system (T2SS), protein L CE462_19630 PF03934 Type II secretion system (T2SS), protein K CE462_19635 PF11612 Type II secretion system (T2SS), protein J CE462_19635 PF07963 Prokaryotic N-terminal methylation motif CE462_19640 PF02501 Type II secretion system (T2SS), protein I CE462_19640 PF07963 Prokaryotic N-terminal methylation motif CE462_19645 PF12019 Type II transport protein GspH CE462_19645 PF07963 Prokaryotic N-terminal methylation motif CE462_19650 PF07963 Prokaryotic N-terminal methylation motif CE462_19650 PF08334 Type II secretion system (T2SS), protein G CE462_19655 PF00482 Type II secretion system (T2SS), protein F CE462_19660 PF00437 Type II/IV secretion system protein CE462_19665 PF03958 Bacterial type II/III secretion system short domain CE462_19665 PF00263 Bacterial type II and III secretion system protein CE462_19670 PF11356 Type II secretion system protein C CE462_19675 PF01479 S4 domain CE462_19680 PF01430 Hsp33 protein CE462_19685 PF01293 Phosphoenolpyruvate carboxykinase CE462_19690 PF00392 Bacterial regulatory proteins, gntR family CE462_19695 PF00557 Metallopeptidase family M24 CE462_19695 PF01321 Creatinase/Prolidase N-terminal domain CE462_19700 PF11756 Nitrous oxide-stimulated promoter CE462_19705 PF00583 Acetyltransferase (GNAT) family CE462_19710 PF05433 Glycine zipper 2TM domain CE462_19715 PF02872 5'-nucleotidase, C-terminal domain CE462_19715 PF00149 Calcineurin-like phosphoesterase CE462_19720 PF01810 LysE type translocator CE462_19725 PF00196 Bacterial regulatory proteins, luxR family CE462_19725 PF03472 Autoinducer binding domain CE462_19730 PF00765 Autoinducer synthase CE462_19735 PF03466 LysR substrate binding domain CE462_19735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_19740 PF00773 RNB domain CE462_19740 PF17876 Cold shock domain CE462_19740 PF08206 Ribonuclease B OB domain CE462_19755 PF02378 Phosphotransferase system, EIIC CE462_19755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE462_19755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE462_19760 PF01232 Mannitol dehydrogenase Rossmann domain CE462_19760 PF08125 Mannitol dehydrogenase C-terminal domain CE462_19765 PF05068 Mannitol repressor CE462_19770 PF03471 Transporter associated domain CE462_19770 PF00999 Sodium/hydrogen exchanger family CE462_19770 PF02080 TrkA-C domain CE462_19775 PF00684 DnaJ central domain CE462_19775 PF00226 DnaJ domain CE462_19775 PF01556 DnaJ C terminal domain CE462_19790 PF01544 CorA-like Mg2+ transporter protein CE462_19795 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CE462_19810 PF04307 LexA-binding, inner membrane-associated putative hydrolase CE462_19815 PF07662 Na+ dependent nucleoside transporter C-terminus CE462_19815 PF01773 Na+ dependent nucleoside transporter N-terminus CE462_19815 PF07670 Nucleoside recognition CE462_19825 PF00271 Helicase conserved C-terminal domain CE462_19825 PF00270 DEAD/DEAH box helicase CE462_19825 PF03880 DbpA RNA binding domain CE462_19850 PF01040 UbiA prenyltransferase family CE462_19855 PF00425 chorismate binding enzyme CE462_19860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CE462_19860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE462_19860 PF16582 Middle domain of thiamine pyrophosphate CE462_19865 PF12697 Alpha/beta hydrolase family CE462_19870 PF00378 Enoyl-CoA hydratase/isomerase CE462_19875 PF13378 Enolase C-terminal domain-like CE462_19880 PF00501 AMP-binding enzyme CE462_19890 PF13808 DDE_Tnp_1-associated CE462_19890 PF01609 Transposase DDE domain CE462_19900 PF00419 Fimbrial protein CE462_19955 PF13808 DDE_Tnp_1-associated CE462_19955 PF01609 Transposase DDE domain CE462_19975 PF02698 DUF218 domain CE462_19980 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CE462_19980 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CE462_19990 PF00561 alpha/beta hydrolase fold CE462_19995 PF03280 Proteobacterial lipase chaperone protein CE462_20010 PF00141 Peroxidase CE462_20025 PF01053 Cys/Met metabolism PLP-dependent enzyme CE462_20035 PF00465 Iron-containing alcohol dehydrogenase CE462_20050 PF03577 Peptidase family C69 CE462_20055 PF00106 short chain dehydrogenase CE462_20075 PF02308 MgtC family CE462_20080 PF16657 Maltogenic Amylase, C-terminal domain CE462_20080 PF02903 Alpha amylase, N-terminal ig-like domain CE462_20080 PF00128 Alpha amylase, catalytic domain CE462_20095 PF00884 Sulfatase CE462_20100 PF01037 Lrp/AsnC ligand binding domain CE462_20110 PF04204 Homoserine O-succinyltransferase CE462_20115 PF01966 HD domain CE462_20115 PF12072 Domain of unknown function (DUF3552) CE462_20115 PF00013 KH domain CE462_20120 PF00994 Probable molybdopterin binding domain CE462_20120 PF02464 Competence-damaged protein CE462_20130 PF00005 ABC transporter CE462_20160 PF07722 Peptidase C26 CE462_20170 PF00924 Mechanosensitive ion channel CE462_20180 PF13419 Haloacid dehalogenase-like hydrolase CE462_20185 PF02899 Phage integrase, N-terminal SAM-like domain CE462_20185 PF00589 Phage integrase family CE462_20195 PF01678 Diaminopimelate epimerase CE462_20200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CE462_20200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CE462_20205 PF01491 Frataxin-like domain CE462_20210 PF02230 Phospholipase/Carboxylesterase CE462_20215 PF12633 Adenylate cyclase NT domain CE462_20215 PF01295 Adenylate cyclase, class-I CE462_20220 PF03900 Porphobilinogen deaminase, C-terminal domain CE462_20220 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CE462_20225 PF02602 Uroporphyrinogen-III synthase HemD CE462_20230 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CE462_20245 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CE462_20260 PF00593 TonB dependent receptor CE462_20260 PF07715 TonB-dependent Receptor Plug Domain CE462_20285 PF08803 Putative mono-oxygenase ydhR CE462_20295 PF06055 Exopolysaccharide synthesis, ExoD CE462_20305 PF01609 Transposase DDE domain CE462_20305 PF13808 DDE_Tnp_1-associated CE462_20335 PF04055 Radical SAM superfamily CE462_20335 PF06968 Biotin and Thiamin Synthesis associated domain CE462_20340 PF05690 Thiazole biosynthesis protein ThiG CE462_20350 PF00899 ThiF family CE462_20355 PF02581 Thiamine monophosphate synthase CE462_20360 PF01964 Radical SAM ThiC family CE462_20360 PF13667 ThiC-associated domain CE462_20405 PF09013 YopH, N-terminal CE462_20405 PF00102 Protein-tyrosine phosphatase CE462_20425 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CE462_20460 PF00872 Transposase, Mutator family CE462_20470 PF01425 Amidase CE462_20475 PF04371 Porphyromonas-type peptidyl-arginine deiminase CE462_20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_20480 PF03466 LysR substrate binding domain CE462_20485 PF00106 short chain dehydrogenase CE462_20500 PF00378 Enoyl-CoA hydratase/isomerase CE462_20505 PF10952 Protein of unknown function (DUF2753) CE462_20510 PF00132 Bacterial transferase hexapeptide (six repeats) CE462_20520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE462_20535 PF02594 Uncharacterised ACR, YggU family COG1872 CE462_20540 PF02325 YGGT family CE462_20545 PF03807 NADP oxidoreductase coenzyme F420-dependent CE462_20545 PF14748 Pyrroline-5-carboxylate reductase dimerisation CE462_20550 PF01168 Alanine racemase, N-terminal domain CE462_20555 PF00437 Type II/IV secretion system protein CE462_20560 PF00437 Type II/IV secretion system protein CE462_20565 PF03883 Peroxide stress protein YaaA CE462_20570 PF00270 DEAD/DEAH box helicase CE462_20570 PF00271 Helicase conserved C-terminal domain CE462_20575 PF05175 Methyltransferase small domain CE462_20580 PF05525 Branched-chain amino acid transport protein CE462_20595 PF01475 Ferric uptake regulator family CE462_20600 PF01207 Dihydrouridine synthase (Dus) CE462_20615 PF00216 Bacterial DNA-binding protein CE462_20620 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CE462_20625 PF07238 PilZ domain CE462_20630 PF18073 Rubredoxin metal binding domain CE462_20645 PF18429 Domain of unknown function (DUF5609) CE462_20655 PF01048 Phosphorylase superfamily CE462_20660 PF01676 Metalloenzyme superfamily CE462_20665 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CE462_20665 PF02885 Glycosyl transferase family, helical bundle domain CE462_20665 PF00591 Glycosyl transferase family, a/b domain CE462_20670 PF01791 DeoC/LacD family aldolase CE462_20685 PF01026 TatD related DNase CE462_20700 PF00583 Acetyltransferase (GNAT) family CE462_20705 PF01938 TRAM domain CE462_20705 PF05958 tRNA (Uracil-5-)-methyltransferase CE462_20710 PF00909 Ammonium Transporter Family CE462_20745 PF00486 Transcriptional regulatory protein, C terminal CE462_20745 PF00072 Response regulator receiver domain CE462_20755 PF18030 RimK PreATP-grasp domain CE462_20755 PF08443 RimK-like ATP-grasp domain CE462_20770 PF00999 Sodium/hydrogen exchanger family CE462_20785 PF08668 HDOD domain CE462_20795 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CE462_20800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_20800 PF08447 PAS fold CE462_20800 PF13426 PAS domain CE462_20805 PF01740 STAS domain CE462_20805 PF08678 Rsbr N terminal CE462_20810 PF13581 Histidine kinase-like ATPase domain CE462_20815 PF01627 Hpt domain CE462_20815 PF00512 His Kinase A (phospho-acceptor) domain CE462_20815 PF00072 Response regulator receiver domain CE462_20815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CE462_20815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_20815 PF00672 HAMP domain CE462_20820 PF00072 Response regulator receiver domain CE462_20830 PF07690 Major Facilitator Superfamily CE462_20835 PF01914 MarC family integral membrane protein CE462_20845 PF01523 Putative modulator of DNA gyrase CE462_20850 PF00795 Carbon-nitrogen hydrolase CE462_20860 PF13116 Protein of unknown function CE462_20860 PF13502 AsmA-like C-terminal region CE462_20865 PF00575 S1 RNA binding domain CE462_20865 PF10150 Ribonuclease E/G family CE462_20870 PF02545 Maf-like protein CE462_20875 PF04093 rod shape-determining protein MreD CE462_20880 PF04085 rod shape-determining protein MreC CE462_20915 PF00263 Bacterial type II and III secretion system protein CE462_20915 PF03958 Bacterial type II/III secretion system short domain CE462_20945 PF00990 Diguanylate cyclase, GGDEF domain CE462_20945 PF17157 Gammaproteobacterial periplasmic sensor domain CE462_20945 PF00563 EAL domain CE462_20955 PF01699 Sodium/calcium exchanger protein CE462_20960 PF00221 Aromatic amino acid lyase CE462_20965 PF01175 Urocanase Rossmann-like domain CE462_20965 PF17391 Urocanase N-terminal domain CE462_20965 PF17392 Urocanase C-terminal domain CE462_20970 PF00491 Arginase family CE462_20975 PF01979 Amidohydrolase family CE462_20980 PF00392 Bacterial regulatory proteins, gntR family CE462_20980 PF07702 UTRA domain CE462_20985 PF00484 Carbonic anhydrase CE462_20990 PF04542 Sigma-70 region 2 CE462_20990 PF04545 Sigma-70, region 4 CE462_20990 PF00140 Sigma-70 factor, region 1.2 CE462_20995 PF18075 FtsX extracellular domain CE462_21000 PF00005 ABC transporter CE462_21005 PF02881 SRP54-type protein, helical bundle domain CE462_21005 PF00448 SRP54-type protein, GTPase domain CE462_21025 PF00440 Bacterial regulatory proteins, tetR family CE462_21035 PF13091 PLD-like domain CE462_21040 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_21040 PF01464 Transglycosylase SLT domain CE462_21050 PF02416 mttA/Hcf106 family CE462_21055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_21055 PF03466 LysR substrate binding domain CE462_21060 PF01914 MarC family integral membrane protein CE462_21065 PF10678 Protein of unknown function (DUF2492) CE462_21070 PF00375 Sodium:dicarboxylate symporter family CE462_21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE462_21080 PF03466 LysR substrate binding domain CE462_21085 PF13533 Biotin-lipoyl like CE462_21090 PF07690 Major Facilitator Superfamily CE462_21095 PF07947 YhhN family CE462_21115 PF00326 Prolyl oligopeptidase family CE462_21115 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CE462_21130 PF02525 Flavodoxin-like fold CE462_21135 PF00999 Sodium/hydrogen exchanger family CE462_21135 PF02254 TrkA-N domain CE462_21165 PF01312 FlhB HrpN YscU SpaS Family CE462_21170 PF01311 Bacterial export proteins, family 1 CE462_21175 PF01313 Bacterial export proteins, family 3 CE462_21180 PF00813 FliP family CE462_21185 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CE462_21200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CE462_21205 PF04348 LppC putative lipoprotein CE462_21210 PF02021 Uncharacterised protein family UPF0102 CE462_21215 PF13580 SIS domain CE462_21220 PF04972 BON domain CE462_21225 PF04386 Stringent starvation protein B CE462_21230 PF02798 Glutathione S-transferase, N-terminal domain CE462_21230 PF00043 Glutathione S-transferase, C-terminal domain CE462_21235 PF02167 Cytochrome C1 family CE462_21240 PF00033 Cytochrome b/b6/petB CE462_21240 PF00032 Cytochrome b(C-terminal)/b6/petD CE462_21245 PF00355 Rieske [2Fe-2S] domain CE462_21245 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CE462_21250 PF00380 Ribosomal protein S9/S16 CE462_21255 PF00572 Ribosomal protein L13 CE462_21260 PF03969 AFG1-like ATPase CE462_21270 PF00595 PDZ domain CE462_21270 PF13180 PDZ domain CE462_21275 PF13180 PDZ domain CE462_21310 PF01979 Amidohydrolase family CE462_21315 PF03841 L-seryl-tRNA selenium transferase CE462_21320 PF07071 KDGP aldolase CE462_21325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE462_21325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE462_21325 PF02378 Phosphotransferase system, EIIC CE462_21330 PF00381 PTS HPr component phosphorylation site CE462_21335 PF03668 P-loop ATPase protein family CE462_21340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE462_21345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CE462_21350 PF04552 Sigma-54, DNA binding domain CE462_21350 PF00309 Sigma-54 factor, Activator interacting domain (AID) CE462_21350 PF04963 Sigma-54 factor, core binding domain CE462_21355 PF12399 Branched-chain amino acid ATP-binding cassette transporter CE462_21355 PF00005 ABC transporter CE462_21360 PF03968 OstA-like protein CE462_21365 PF06835 Lipopolysaccharide-assembly, LptC-related CE462_21375 PF01380 SIS domain CE462_21375 PF00571 CBS domain CE462_21380 PF00005 ABC transporter CE462_21385 PF02405 Permease MlaE CE462_21390 PF02470 MlaD protein CE462_21395 PF05494 MlaC protein CE462_21405 PF01722 BolA-like protein CE462_21410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CE462_21415 PF01523 Putative modulator of DNA gyrase CE462_21420 PF04751 Protein of unknown function (DUF615) CE462_21430 PF04363 Protein of unknown function (DUF496) CE462_21470 PF01196 Ribosomal protein L17 CE462_21475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CE462_21475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CE462_21475 PF01000 RNA polymerase Rpb3/RpoA insert domain CE462_21480 PF01479 S4 domain CE462_21480 PF00163 Ribosomal protein S4/S9 N-terminal domain CE462_21485 PF00411 Ribosomal protein S11 CE462_21490 PF00416 Ribosomal protein S13/S18 CE462_21495 PF00444 Ribosomal protein L36 CE462_21500 PF00344 SecY translocase CE462_21505 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CE462_21510 PF00327 Ribosomal protein L30p/L7e CE462_21515 PF03719 Ribosomal protein S5, C-terminal domain CE462_21515 PF00333 Ribosomal protein S5, N-terminal domain CE462_21520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CE462_21525 PF00347 Ribosomal protein L6 CE462_21530 PF00410 Ribosomal protein S8 CE462_21535 PF00253 Ribosomal protein S14p/S29e CE462_21540 PF00281 Ribosomal protein L5 CE462_21540 PF00673 ribosomal L5P family C-terminus CE462_21545 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CE462_21550 PF00238 Ribosomal protein L14p/L23e CE462_21555 PF00366 Ribosomal protein S17 CE462_21560 PF00831 Ribosomal L29 protein CE462_21565 PF00252 Ribosomal protein L16p/L10e CE462_21570 PF07650 KH domain CE462_21570 PF00189 Ribosomal protein S3, C-terminal domain CE462_21575 PF00237 Ribosomal protein L22p/L17e CE462_21580 PF00203 Ribosomal protein S19 CE462_21585 PF03947 Ribosomal Proteins L2, C-terminal domain CE462_21585 PF00181 Ribosomal Proteins L2, RNA binding domain CE462_21590 PF00276 Ribosomal protein L23 CE462_21595 PF00573 Ribosomal protein L4/L1 family CE462_21600 PF00297 Ribosomal protein L3 CE462_21605 PF00338 Ribosomal protein S10p/S20e CE462_21615 PF00672 HAMP domain CE462_21615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_21615 PF00512 His Kinase A (phospho-acceptor) domain CE462_21620 PF00072 Response regulator receiver domain CE462_21620 PF00486 Transcriptional regulatory protein, C terminal CE462_21625 PF01272 Transcription elongation factor, GreA/GreB, C-term CE462_21625 PF03449 Transcription elongation factor, N-terminal CE462_21630 PF16921 Tex protein YqgF-like domain CE462_21630 PF09371 Tex-like protein N-terminal domain CE462_21630 PF00575 S1 RNA binding domain CE462_21630 PF17674 HHH domain CE462_21650 PF00561 alpha/beta hydrolase fold CE462_21655 PF00156 Phosphoribosyl transferase domain CE462_21660 PF01521 Iron-sulphur cluster biosynthesis CE462_21660 PF01106 NifU-like domain CE462_21665 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CE462_21665 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CE462_21670 PF02556 Preprotein translocase subunit SecB CE462_21675 PF00581 Rhodanese-like domain CE462_21680 PF01676 Metalloenzyme superfamily CE462_21680 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CE462_21685 PF01551 Peptidase family M23 CE462_21700 PF01081 KDPG and KHG aldolase CE462_21705 PF00920 Dehydratase family CE462_21710 PF01202 Shikimate kinase CE462_21715 PF02447 GntP family permease CE462_21720 PF13091 PLD-like domain CE462_21725 PF17191 RecG wedge domain CE462_21725 PF00270 DEAD/DEAH box helicase CE462_21725 PF00271 Helicase conserved C-terminal domain CE462_21735 PF09500 Putative thioesterase (yiiD_Cterm) CE462_21735 PF00583 Acetyltransferase (GNAT) family CE462_21745 PF02580 D-Tyr-tRNA(Tyr) deacylase CE462_21750 PF03631 Virulence factor BrkB CE462_21760 PF03951 Glutamine synthetase, beta-Grasp domain CE462_21760 PF00120 Glutamine synthetase, catalytic domain CE462_21770 PF00989 PAS fold CE462_21770 PF00512 His Kinase A (phospho-acceptor) domain CE462_21770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_21775 PF00158 Sigma-54 interaction domain CE462_21775 PF02954 Bacterial regulatory protein, Fis family CE462_21775 PF00072 Response regulator receiver domain CE462_21780 PF00962 Adenosine/AMP deaminase CE462_21785 PF06969 HemN C-terminal domain CE462_21785 PF04055 Radical SAM superfamily CE462_21790 PF10675 Protein of unknown function (DUF2489) CE462_21795 PF04220 Der GTPase activator (YihI) CE462_21800 PF00034 Cytochrome c CE462_21805 PF01926 50S ribosome-binding GTPase CE462_21810 PF07369 Protein of unknown function (DUF1488) CE462_21815 PF01488 Shikimate / quinate 5-dehydrogenase CE462_21815 PF08501 Shikimate dehydrogenase substrate binding domain CE462_21815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CE462_21820 PF01218 Coproporphyrinogen III oxidase CE462_21825 PF01300 Telomere recombination CE462_21830 PF00731 AIR carboxylase CE462_21835 PF01396 Topoisomerase DNA binding C4 zinc finger CE462_21840 PF04361 Protein of unknown function (DUF494) CE462_21845 PF17782 DprA winged helix domain CE462_21845 PF02481 DNA recombination-mediator protein A CE462_21850 PF01476 LysM domain CE462_21855 PF01327 Polypeptide deformylase CE462_21860 PF02911 Formyl transferase, C-terminal domain CE462_21860 PF00551 Formyl transferase CE462_21865 PF01189 16S rRNA methyltransferase RsmB/F CE462_21865 PF01029 NusB family CE462_21870 PF02080 TrkA-C domain CE462_21870 PF02254 TrkA-N domain CE462_21875 PF02386 Cation transport protein CE462_21880 PF02646 RmuC family CE462_21895 PF02082 Transcriptional regulator CE462_21900 PF00294 pfkB family carbohydrate kinase CE462_21905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CE462_21905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CE462_21910 PF02540 NAD synthase CE462_21910 PF00958 GMP synthase C terminal domain CE462_21910 PF00117 Glutamine amidotransferase class-I CE462_21915 PF00171 Aldehyde dehydrogenase family CE462_21920 PF00202 Aminotransferase class-III CE462_21925 PF01381 Helix-turn-helix CE462_21930 PF00171 Aldehyde dehydrogenase family CE462_21940 PF00892 EamA-like transporter family CE462_21945 PF12833 Helix-turn-helix domain CE462_21950 PF01810 LysE type translocator CE462_21955 PF00689 Cation transporting ATPase, C-terminus CE462_21955 PF00690 Cation transporter/ATPase, N-terminus CE462_21970 PF13806 Rieske-like [2Fe-2S] domain CE462_21975 PF01226 Formate/nitrite transporter CE462_21980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CE462_21980 PF14824 Sirohaem biosynthesis protein central CE462_21980 PF10414 Sirohaem synthase dimerisation region CE462_21985 PF01769 Divalent cation transporter CE462_21985 PF00571 CBS domain CE462_21985 PF03448 MgtE intracellular N domain CE462_21990 PF00672 HAMP domain CE462_21990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE462_21995 PF03737 Aldolase/RraA CE462_22000 PF02592 Putative vitamin uptake transporter CE462_22010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CE462_22015 PF00034 Cytochrome c CE462_22020 PF00570 HRDC domain CE462_22020 PF16124 RecQ zinc-binding CE462_22020 PF00271 Helicase conserved C-terminal domain CE462_22020 PF00270 DEAD/DEAH box helicase CE462_22020 PF09382 RQC domain CE462_22025 PF03061 Thioesterase superfamily CE462_22045 PF03473 MOSC domain CE462_22045 PF03475 3-alpha domain CE462_22050 PF00528 Binding-protein-dependent transport system inner membrane component CE462_22055 PF00528 Binding-protein-dependent transport system inner membrane component CE462_22060 PF08402 TOBE domain CE462_22060 PF00005 ABC transporter CE462_22065 PF13416 Bacterial extracellular solute-binding protein CE462_22070 PF13416 Bacterial extracellular solute-binding protein CE462_22075 PF00202 Aminotransferase class-III CE462_22080 PF00120 Glutamine synthetase, catalytic domain CE462_22085 PF01258 Prokaryotic dksA/traR C4-type zinc finger CE462_22100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE462_22100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE462_22105 PF00012 Hsp70 protein CE462_22120 PF00128 Alpha amylase, catalytic domain CE462_22120 PF02903 Alpha amylase, N-terminal ig-like domain CE462_22125 PF02719 Polysaccharide biosynthesis protein CE462_22130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CE462_22155 PF00501 AMP-binding enzyme CE462_22155 PF13193 AMP-binding enzyme C-terminal domain CE462_22175 PF02348 Cytidylyltransferase CE462_22185 PF03102 NeuB family CE462_22185 PF08666 SAF domain CE462_22210 PF01609 Transposase DDE domain CE462_22210 PF13808 DDE_Tnp_1-associated CE462_22220 PF09940 Domain of unknown function (DUF2172) CE462_22220 PF16254 Domain of unknown function (DUF4910) CE462_22220 PF16221 winged helix-turn-helix CE462_22255 PF05958 tRNA (Uracil-5-)-methyltransferase CE462_22260 PF00072 Response regulator receiver domain CE462_22260 PF00486 Transcriptional regulatory protein, C terminal CE462_22265 PF00672 HAMP domain CE462_22265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_22265 PF00512 His Kinase A (phospho-acceptor) domain CE462_22275 PF00390 Malic enzyme, N-terminal domain CE462_22275 PF03949 Malic enzyme, NAD binding domain CE462_22280 PF13460 NAD(P)H-binding CE462_22280 PF11066 Protein of unknown function (DUF2867) CE462_22285 PF01197 Ribosomal protein L31 CE462_22290 PF18074 Primosomal protein N C-terminal domain CE462_22290 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CE462_22290 PF17764 3′ DNA-binding domain (3′BD) CE462_22290 PF00271 Helicase conserved C-terminal domain CE462_22290 PF00270 DEAD/DEAH box helicase CE462_22300 PF00440 Bacterial regulatory proteins, tetR family CE462_22310 PF00691 OmpA family CE462_22310 PF01389 OmpA-like transmembrane domain CE462_22315 PF00585 C-terminal regulatory domain of Threonine dehydratase CE462_22315 PF00291 Pyridoxal-phosphate dependent enzyme CE462_22320 PF00920 Dehydratase family CE462_22325 PF01063 Amino-transferase class IV CE462_22335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE462_22335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CE462_22335 PF00205 Thiamine pyrophosphate enzyme, central domain CE462_22340 PF01078 Magnesium chelatase, subunit ChlI CE462_22340 PF13335 Magnesium chelatase, subunit ChlI C-terminal CE462_22350 PF04463 Protein of unknown function (DUF523) CE462_22360 PF00857 Isochorismatase family CE462_22365 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CE462_22365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CE462_22375 PF00005 ABC transporter CE462_22380 PF00528 Binding-protein-dependent transport system inner membrane component CE462_22385 PF01323 DSBA-like thioredoxin domain CE462_22390 PF01636 Phosphotransferase enzyme family CE462_22395 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CE462_22395 PF12801 4Fe-4S binding domain CE462_22395 PF13746 4Fe-4S dicluster domain CE462_22400 PF06288 Protein of unknown function (DUF1040) CE462_22405 PF00360 Phytochrome region CE462_22405 PF00990 Diguanylate cyclase, GGDEF domain CE462_22405 PF01590 GAF domain CE462_22405 PF00563 EAL domain CE462_22410 PF13411 MerR HTH family regulatory protein CE462_22415 PF00403 Heavy-metal-associated domain CE462_22420 PF00156 Phosphoribosyl transferase domain CE462_22425 PF01138 3' exoribonuclease family, domain 1 CE462_22425 PF03725 3' exoribonuclease family, domain 2 CE462_22430 PF03755 YicC-like family, N-terminal region CE462_22430 PF08340 Domain of unknown function (DUF1732) CE462_22445 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CE462_22465 PF01370 NAD dependent epimerase/dehydratase family CE462_22470 PF00440 Bacterial regulatory proteins, tetR family CE462_22470 PF08360 QacR-like protein, C-terminal region CE462_22475 PF00155 Aminotransferase class I and II CE462_22480 PF08240 Alcohol dehydrogenase GroES-like domain CE462_22480 PF00107 Zinc-binding dehydrogenase CE462_22495 PF13361 UvrD-like helicase C-terminal domain CE462_22495 PF00580 UvrD/REP helicase N-terminal domain CE462_22500 PF00266 Aminotransferase class-V CE462_22505 PF02657 Fe-S metabolism associated domain CE462_22510 PF00899 ThiF family CE462_22540 PF12724 Flavodoxin domain CE462_22545 PF02386 Cation transport protein CE462_22550 PF09186 Domain of unknown function (DUF1949) CE462_22550 PF01205 Uncharacterized protein family UPF0029 CE462_22560 PF13193 AMP-binding enzyme C-terminal domain CE462_22560 PF00501 AMP-binding enzyme CE462_22565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CE462_22565 PF00378 Enoyl-CoA hydratase/isomerase CE462_22565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CE462_22570 PF00108 Thiolase, N-terminal domain CE462_22570 PF02803 Thiolase, C-terminal domain CE462_22575 PF00486 Transcriptional regulatory protein, C terminal CE462_22575 PF00072 Response regulator receiver domain CE462_22580 PF00512 His Kinase A (phospho-acceptor) domain CE462_22580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE462_22580 PF00672 HAMP domain CE462_22585 PF01547 Bacterial extracellular solute-binding protein CE462_22595 PF01206 Sulfurtransferase TusA CE462_22600 PF01042 Endoribonuclease L-PSP CE462_22605 PF00691 OmpA family CE462_22605 PF13488 Glycine zipper CE462_22615 PF02091 Glycyl-tRNA synthetase alpha subunit CE462_22620 PF05746 DALR anticodon binding domain CE462_22620 PF02092 Glycyl-tRNA synthetase beta subunit CE462_22625 PF11008 Protein of unknown function (DUF2846) CE462_22640 PF07702 UTRA domain CE462_22640 PF00392 Bacterial regulatory proteins, gntR family CE462_22645 PF01590 GAF domain CE462_22645 PF00158 Sigma-54 interaction domain CE462_22655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE462_22655 PF18113 Rubredoxin binding C-terminal domain CE462_22665 PF12801 4Fe-4S binding domain CE462_22670 PF03222 Tryptophan/tyrosine permease family CE462_22675 PF05932 Tir chaperone protein (CesT) family CE462_22685 PF00990 Diguanylate cyclase, GGDEF domain CE462_22685 PF00563 EAL domain CE462_22685 PF13426 PAS domain CE462_22700 PF09013 YopH, N-terminal CE462_22700 PF00102 Protein-tyrosine phosphatase CE462_22710 PF01609 Transposase DDE domain CE462_22715 PF00872 Transposase, Mutator family CE462_22740 PF02056 Family 4 glycosyl hydrolase CE462_22740 PF11975 Family 4 glycosyl hydrolase C-terminal domain CE462_22745 PF00356 Bacterial regulatory proteins, lacI family CE462_22750 PF13458 Periplasmic binding protein CE462_22755 PF02653 Branched-chain amino acid transport system / permease component CE462_22760 PF02653 Branched-chain amino acid transport system / permease component CE462_22760 PF11862 Domain of unknown function (DUF3382) CE462_22765 PF00005 ABC transporter CE462_22765 PF12399 Branched-chain amino acid ATP-binding cassette transporter CE462_22770 PF00005 ABC transporter CE462_22780 PF01810 LysE type translocator CE462_22785 PF00581 Rhodanese-like domain CE462_22790 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CE462_22790 PF01694 Rhomboid family CE462_22795 PF12262 Bacterial virulence factor lipase N-terminal CE462_22800 PF04380 Membrane fusogenic activity CE462_22805 PF00175 Oxidoreductase NAD-binding domain CE462_22810 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CE462_22820 PF07497 Rho termination factor, RNA-binding domain CE462_22820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE462_22820 PF07498 Rho termination factor, N-terminal domain CE462_22825 PF00085 Thioredoxin CE462_22830 PF00270 DEAD/DEAH box helicase CE462_22830 PF00271 Helicase conserved C-terminal domain CE462_22835 PF02541 Ppx/GppA phosphatase family CE462_22845 PF04445 Putative SAM-dependent methyltransferase CE462_22850 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE462_22855 PF00563 EAL domain CE462_22855 PF00990 Diguanylate cyclase, GGDEF domain CE462_22855 PF03707 Bacterial signalling protein N terminal repeat CE462_22860 PF01432 Peptidase family M3 CE462_22865 PF00490 Delta-aminolevulinic acid dehydratase CE462_22870 PF01026 TatD related DNase CE462_22875 PF00902 Sec-independent protein translocase protein (TatC) CE462_22880 PF02416 mttA/Hcf106 family CE462_22885 PF02416 mttA/Hcf106 family CE462_22890 PF03109 ABC1 family CE462_22895 PF02036 SCP-2 sterol transfer family CE462_22900 PF01209 ubiE/COQ5 methyltransferase family CE462_22905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CE462_22910 PF07969 Amidohydrolase family CE462_22950 PF03544 Gram-negative bacterial TonB protein C-terminal CE462_22955 PF02472 Biopolymer transport protein ExbD/TolR CE462_22960 PF01618 MotA/TolQ/ExbB proton channel family CE462_22965 PF01618 MotA/TolQ/ExbB proton channel family CE462_22975 PF00196 Bacterial regulatory proteins, luxR family CE462_22975 PF03472 Autoinducer binding domain CE462_22980 PF01380 SIS domain CE462_22985 PF00455 DeoR C terminal sensor domain CE462_22985 PF08220 DeoR-like helix-turn-helix domain CE462_22990 PF00072 Response regulator receiver domain CE462_22990 PF00486 Transcriptional regulatory protein, C terminal CE462_23000 PF00905 Penicillin binding protein transpeptidase domain CE462_23005 PF06123 Inner membrane protein CreD CE462_23010 PF14602 Hexapeptide repeat of succinyl-transferase CE462_23010 PF00132 Bacterial transferase hexapeptide (six repeats) CE462_23010 PF12804 MobA-like NTP transferase domain CE462_23015 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CE462_23015 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CE462_23020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE462_23020 PF02874 ATP synthase alpha/beta family, beta-barrel domain CE462_23025 PF00231 ATP synthase CE462_23030 PF00306 ATP synthase alpha/beta chain, C terminal domain CE462_23030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE462_23030 PF02874 ATP synthase alpha/beta family, beta-barrel domain CE462_23035 PF00213 ATP synthase delta (OSCP) subunit CE462_23040 PF00430 ATP synthase B/B' CF(0) CE462_23045 PF00137 ATP synthase subunit C CE462_23050 PF00119 ATP synthase A chain CE462_23055 PF03899 ATP synthase I chain CE462_23060 PF02195 ParB-like nuclease domain CE462_23060 PF17762 HTH domain found in ParB protein CE462_23065 PF13614 AAA domain CE462_23070 PF02527 rRNA small subunit methyltransferase G CE462_23075 PF01134 Glucose inhibited division protein A CE462_23075 PF13932 GidA associated domain CE462_23080 PF00258 Flavodoxin CE462_23085 PF00593 TonB dependent receptor CE462_23085 PF07715 TonB-dependent Receptor Plug Domain CE462_23090 PF00005 ABC transporter CE462_23095 PF00005 ABC transporter CE462_23100 PF01497 Periplasmic binding protein CE462_23105 PF01032 FecCD transport family CE462_23110 PF00593 TonB dependent receptor CE462_23110 PF07715 TonB-dependent Receptor Plug Domain CE462_23115 PF01497 Periplasmic binding protein CE462_23120 PF00005 ABC transporter CE462_23125 PF01032 FecCD transport family CE462_23130 PF01032 FecCD transport family CE462_23135 PF00005 ABC transporter CE462_23140 PF04954 Siderophore-interacting protein CE462_23140 PF08021 Siderophore-interacting FAD-binding domain CE462_23140 PF00005 ABC transporter CE462_23140 PF00664 ABC transporter transmembrane region CE462_23150 PF00550 Phosphopantetheine attachment site CE462_23150 PF00975 Thioesterase domain CE462_23150 PF00501 AMP-binding enzyme CE462_23150 PF00668 Condensation domain CE462_23150 PF13193 AMP-binding enzyme C-terminal domain CE462_23155 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CE462_23160 PF00501 AMP-binding enzyme CE462_23160 PF00668 Condensation domain CE462_23160 PF00550 Phosphopantetheine attachment site CE462_23170 PF00282 Pyridoxal-dependent decarboxylase conserved domain CE462_23175 PF01926 50S ribosome-binding GTPase CE462_23175 PF12631 MnmE helical domain CE462_23175 PF10396 GTP-binding protein TrmE N-terminus CE462_23180 PF14849 YidC periplasmic domain CE462_23180 PF02096 60Kd inner membrane protein CE462_23185 PF01809 Putative membrane protein insertion efficiency factor CE462_23190 PF00825 Ribonuclease P CE462_23195 PF00468 Ribosomal protein L34 CE462_23205 PF00528 Binding-protein-dependent transport system inner membrane component CE462_23210 PF00497 Bacterial extracellular solute-binding proteins, family 3