locus-tag class description G7042_00165 PF00929 Exonuclease G7042_00255 PF02899 Phage integrase, N-terminal SAM-like domain G7042_00255 PF00589 Phage integrase family G7042_00260 PF00156 Phosphoribosyl transferase domain G7042_00265 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) G7042_00270 PF07417 Sigma factor-binding transcriptional regulator Crl G7042_00275 PF00696 Amino acid kinase family G7042_00275 PF01472 PUA domain G7042_00280 PF00171 Aldehyde dehydrogenase family G7042_00290 PF00582 Universal stress protein family G7042_00310 PF00294 pfkB family carbohydrate kinase G7042_00315 PF04227 Indigoidine synthase A like protein G7042_00320 PF00194 Eukaryotic-type carbonic anhydrase G7042_00325 PF01609 Transposase DDE domain G7042_00325 PF13808 DDE_Tnp_1-associated G7042_00330 PF03150 Di-haem cytochrome c peroxidase G7042_00330 PF00034 Cytochrome c G7042_00375 PF00550 Phosphopantetheine attachment site G7042_00380 PF00550 Phosphopantetheine attachment site G7042_00390 PF00501 AMP-binding enzyme G7042_00390 PF13193 AMP-binding enzyme C-terminal domain G7042_00395 PF07977 FabA-like domain G7042_00405 PF00221 Aromatic amino acid lyase G7042_00430 PF02801 Beta-ketoacyl synthase, C-terminal domain G7042_00430 PF00109 Beta-ketoacyl synthase, N-terminal domain G7042_00445 PF02801 Beta-ketoacyl synthase, C-terminal domain G7042_00445 PF00109 Beta-ketoacyl synthase, N-terminal domain G7042_00455 PF00994 Probable molybdopterin binding domain G7042_00460 PF13358 DDE superfamily endonuclease G7042_00460 PF13592 Winged helix-turn helix G7042_00470 PF06738 Putative threonine/serine exporter G7042_00475 PF12821 Threonine/Serine exporter, ThrE G7042_00480 PF00186 Dihydrofolate reductase G7042_00485 PF00571 CBS domain G7042_00485 PF00005 ABC transporter G7042_00490 PF00528 Binding-protein-dependent transport system inner membrane component G7042_00495 PF04069 Substrate binding domain of ABC-type glycine betaine transport system G7042_00500 PF01507 Phosphoadenosine phosphosulfate reductase family G7042_00505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain G7042_00505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain G7042_00510 PF00667 FAD binding domain G7042_00510 PF00258 Flavodoxin G7042_00510 PF00175 Oxidoreductase NAD-binding domain G7042_00515 PF02567 Phenazine biosynthesis-like protein G7042_00520 PF00152 tRNA synthetases class II (D, K and N) G7042_00520 PF01336 OB-fold nucleic acid binding domain G7042_00530 PF02743 Cache domain G7042_00530 PF00672 HAMP domain G7042_00530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_00535 PF03616 Sodium/glutamate symporter G7042_00540 PF17763 Glutaminase/Asparaginase C-terminal domain G7042_00540 PF00710 Asparaginase, N-terminal G7042_00545 PF07023 Protein of unknown function (DUF1315) G7042_00550 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain G7042_00550 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain G7042_00565 PF01343 Peptidase family S49 G7042_00570 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_00570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family G7042_00575 PF00881 Nitroreductase family G7042_00590 PF01842 ACT domain G7042_00590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G7042_00590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain G7042_00595 PF05985 Ethanolamine ammonia-lyase light chain (EutC) G7042_00600 PF06751 Ethanolamine ammonia lyase large subunit (EutB) G7042_00605 PF13520 Amino acid permease G7042_00615 PF08240 Alcohol dehydrogenase GroES-like domain G7042_00615 PF00107 Zinc-binding dehydrogenase G7042_00620 PF03466 LysR substrate binding domain G7042_00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_00625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 G7042_00625 PF00367 phosphotransferase system, EIIB G7042_00625 PF02378 Phosphotransferase system, EIIC G7042_00630 PF00474 Sodium:solute symporter family G7042_00635 PF06196 Protein of unknown function (DUF997) G7042_00640 PF02785 Biotin carboxylase C-terminal domain G7042_00640 PF00289 Biotin carboxylase, N-terminal domain G7042_00640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G7042_00645 PF00364 Biotin-requiring enzyme G7042_00650 PF01220 Dehydroquinase class II G7042_00655 PF16177 Acetyl-coenzyme A synthetase N-terminus G7042_00655 PF00501 AMP-binding enzyme G7042_00655 PF13193 AMP-binding enzyme C-terminal domain G7042_00665 PF00990 Diguanylate cyclase, GGDEF domain G7042_00665 PF00563 EAL domain G7042_00665 PF03707 Bacterial signalling protein N terminal repeat G7042_00685 PF02613 Nitrate reductase delta subunit G7042_00700 PF00464 Serine hydroxymethyltransferase G7042_00715 PF03477 ATP cone domain G7042_00720 PF01872 RibD C-terminal domain G7042_00720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region G7042_00725 PF00677 Lumazine binding domain G7042_00730 PF00925 GTP cyclohydrolase II G7042_00730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase G7042_00735 PF00885 6,7-dimethyl-8-ribityllumazine synthase G7042_00740 PF01029 NusB family G7042_00745 PF00586 AIR synthase related protein, N-terminal domain G7042_00745 PF02769 AIR synthase related protein, C-terminal domain G7042_00750 PF04608 Phosphatidylglycerophosphatase A G7042_00755 PF00005 ABC transporter G7042_00755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_00760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_00765 PF00528 Binding-protein-dependent transport system inner membrane component G7042_00770 PF00528 Binding-protein-dependent transport system inner membrane component G7042_00770 PF12911 N-terminal TM domain of oligopeptide transport permease C G7042_00775 PF13292 1-deoxy-D-xylulose-5-phosphate synthase G7042_00775 PF02779 Transketolase, pyrimidine binding domain G7042_00775 PF02780 Transketolase, C-terminal domain G7042_00780 PF00348 Polyprenyl synthetase G7042_00785 PF02609 Exonuclease VII small subunit G7042_00790 PF01618 MotA/TolQ/ExbB proton channel family G7042_00795 PF00691 OmpA family G7042_00795 PF13677 Membrane MotB of proton-channel complex MotA/MotB G7042_00815 PF01272 Transcription elongation factor, GreA/GreB, C-term G7042_00815 PF03449 Transcription elongation factor, N-terminal G7042_00825 PF01985 CRS1 / YhbY (CRM) domain G7042_00830 PF01728 FtsJ-like methyltransferase G7042_00835 PF01434 Peptidase family M41 G7042_00835 PF17862 AAA+ lid domain G7042_00835 PF06480 FtsH Extracellular G7042_00835 PF00004 ATPase family associated with various cellular activities (AAA) G7042_00840 PF00809 Pterin binding enzyme G7042_00845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III G7042_00845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II G7042_00845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain G7042_00845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I G7042_00850 PF00121 Triosephosphate isomerase G7042_00855 PF03840 Preprotein translocase SecG subunit G7042_00870 PF02576 RimP N-terminal domain G7042_00870 PF17384 RimP C-terminal SH3 domain G7042_00875 PF00575 S1 RNA binding domain G7042_00875 PF08529 NusA N-terminal domain G7042_00875 PF13184 NusA-like KH domain G7042_00880 PF04760 Translation initiation factor IF-2, N-terminal region G7042_00880 PF08364 Bacterial translation initiation factor IF-2 associated region G7042_00880 PF00009 Elongation factor Tu GTP binding domain G7042_00880 PF11987 Translation-initiation factor 2 G7042_00885 PF02033 Ribosome-binding factor A G7042_00890 PF16198 tRNA pseudouridylate synthase B C-terminal domain G7042_00890 PF09157 Pseudouridine synthase II TruB, C-terminal G7042_00890 PF01509 TruB family pseudouridylate synthase (N terminal domain) G7042_00895 PF00312 Ribosomal protein S15 G7042_00900 PF00013 KH domain G7042_00900 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain G7042_00900 PF01138 3' exoribonuclease family, domain 1 G7042_00900 PF03725 3' exoribonuclease family, domain 2 G7042_00900 PF00575 S1 RNA binding domain G7042_00905 PF07690 Major Facilitator Superfamily G7042_00910 PF00990 Diguanylate cyclase, GGDEF domain G7042_00915 PF02635 DsrE/DsrF-like family G7042_00920 PF06476 Protein of unknown function (DUF1090) G7042_00930 PF03575 Peptidase family S51 G7042_00935 PF01609 Transposase DDE domain G7042_00935 PF13808 DDE_Tnp_1-associated G7042_00960 PF02668 Taurine catabolism dioxygenase TauD, TfdA family G7042_00965 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase G7042_00970 PF03734 L,D-transpeptidase catalytic domain G7042_00970 PF17969 L,D-transpeptidase C-terminal domain G7042_00980 PF01523 Putative modulator of DNA gyrase G7042_00985 PF01523 Putative modulator of DNA gyrase G7042_00990 PF00258 Flavodoxin G7042_00995 PF02899 Phage integrase, N-terminal SAM-like domain G7042_00995 PF00589 Phage integrase family G7042_01000 PF00990 Diguanylate cyclase, GGDEF domain G7042_01005 PF01741 Large-conductance mechanosensitive channel, MscL G7042_01015 PF01368 DHH family G7042_01015 PF17768 RecJ OB domain G7042_01015 PF02272 DHHA1 domain G7042_01025 PF02508 Rnf-Nqr subunit, membrane protein G7042_01030 PF06821 Serine hydrolase G7042_01035 PF13302 Acetyltransferase (GNAT) domain G7042_01055 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family G7042_01055 PF04055 Radical SAM superfamily G7042_01060 PF03099 Biotin/lipoate A/B protein ligase family G7042_01065 PF04359 Protein of unknown function (DUF493) G7042_01070 PF07943 Penicillin-binding protein 5, C-terminal domain G7042_01070 PF00768 D-alanyl-D-alanine carboxypeptidase G7042_01075 PF03330 Lytic transglycolase G7042_01075 PF05036 Sporulation related domain G7042_01080 PF13406 Transglycosylase SLT domain G7042_01085 PF01098 Cell cycle protein G7042_01090 PF03717 Penicillin-binding Protein dimerisation domain G7042_01090 PF00905 Penicillin binding protein transpeptidase domain G7042_01095 PF02590 Predicted SPOUT methyltransferase G7042_01105 PF01467 Cytidylyltransferase-like G7042_01125 PF13603 Leucyl-tRNA synthetase, Domain 2 G7042_01125 PF00133 tRNA synthetases class I (I, L, M and V) G7042_01125 PF08264 Anticodon-binding domain of tRNA G7042_01130 PF07295 Zinc-ribbon containing domain G7042_01135 PF00795 Carbon-nitrogen hydrolase G7042_01140 PF00571 CBS domain G7042_01140 PF03471 Transporter associated domain G7042_01145 PF02130 Uncharacterized protein family UPF0054 G7042_01150 PF02562 PhoH-like protein G7042_01155 PF00919 Uncharacterized protein family UPF0004 G7042_01155 PF01938 TRAM domain G7042_01155 PF04055 Radical SAM superfamily G7042_01160 PF01494 FAD binding domain G7042_01165 PF00313 'Cold-shock' DNA-binding domain G7042_01170 PF05230 MASE2 domain G7042_01170 PF00990 Diguanylate cyclase, GGDEF domain G7042_01175 PF03466 LysR substrate binding domain G7042_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_01185 PF13419 Haloacid dehalogenase-like hydrolase G7042_01205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G7042_01205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain G7042_01215 PF08207 Elongation factor P (EF-P) KOW-like domain G7042_01215 PF01132 Elongation factor P (EF-P) OB domain G7042_01215 PF09285 Elongation factor P, C-terminal G7042_01225 PF00478 IMP dehydrogenase / GMP reductase domain G7042_01235 PF00512 His Kinase A (phospho-acceptor) domain G7042_01235 PF08521 Two-component sensor kinase N-terminal G7042_01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_01240 PF00486 Transcriptional regulatory protein, C terminal G7042_01240 PF00072 Response regulator receiver domain G7042_01260 PF00501 AMP-binding enzyme G7042_01275 PF06224 Winged helix DNA-binding domain G7042_01295 PF02313 Fumarate reductase subunit D G7042_01300 PF02300 Fumarate reductase subunit C G7042_01305 PF13085 2Fe-2S iron-sulfur cluster binding domain G7042_01305 PF13183 4Fe-4S dicluster domain G7042_01310 PF00890 FAD binding domain G7042_01310 PF02910 Fumarate reductase flavoprotein C-term G7042_01315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_01315 PF00672 HAMP domain G7042_01315 PF02743 Cache domain G7042_01320 PF03009 Glycerophosphoryl diester phosphodiesterase family G7042_01350 PF01476 LysM domain G7042_01350 PF01551 Peptidase family M23 G7042_01350 PF08525 Opacity-associated protein A N-terminal motif G7042_01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_01365 PF03466 LysR substrate binding domain G7042_01380 PF00672 HAMP domain G7042_01380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_01380 PF17200 Single Cache domain 2 G7042_01385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_01385 PF03466 LysR substrate binding domain G7042_01390 PF00905 Penicillin binding protein transpeptidase domain G7042_01390 PF00912 Transglycosylase G7042_01390 PF17092 Penicillin-binding protein OB-like domain G7042_01395 PF11104 Type IV pilus assembly protein PilM; G7042_01420 PF01202 Shikimate kinase G7042_01425 PF01761 3-dehydroquinate synthase G7042_01435 PF02086 D12 class N6 adenine-specific DNA methyltransferase G7042_01440 PF00834 Ribulose-phosphate 3 epimerase family G7042_01445 PF13419 Haloacid dehalogenase-like hydrolase G7042_01450 PF00579 tRNA synthetases class I (W and Y) G7042_01460 PF00117 Glutamine amidotransferase class-I G7042_01465 PF00202 Aminotransferase class-III G7042_01470 PF04958 Arginine N-succinyltransferase beta subunit G7042_01475 PF00171 Aldehyde dehydrogenase family G7042_01485 PF13419 Haloacid dehalogenase-like hydrolase G7042_01500 PF07690 Major Facilitator Superfamily G7042_01505 PF00005 ABC transporter G7042_01505 PF12848 ABC transporter G7042_01515 PF16657 Maltogenic Amylase, C-terminal domain G7042_01515 PF00128 Alpha amylase, catalytic domain G7042_01530 PF00012 Hsp70 protein G7042_01550 PF07859 alpha/beta hydrolase fold G7042_01555 PF04266 ASCH domain G7042_01565 PF01048 Phosphorylase superfamily G7042_01570 PF04973 Nicotinamide mononucleotide transporter G7042_01575 PF03600 Citrate transporter G7042_01575 PF02080 TrkA-C domain G7042_01620 PF01926 50S ribosome-binding GTPase G7042_01620 PF06071 Protein of unknown function (DUF933) G7042_01625 PF01195 Peptidyl-tRNA hydrolase G7042_01630 PF00149 Calcineurin-like phosphoesterase G7042_01630 PF02872 5'-nucleotidase, C-terminal domain G7042_01635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase G7042_01635 PF14572 Phosphoribosyl synthetase-associated domain G7042_01645 PF08544 GHMP kinases C terminal G7042_01645 PF00288 GHMP kinases N terminal domain G7042_01650 PF03550 Outer membrane lipoprotein LolB G7042_01655 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain G7042_01655 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain G7042_01655 PF01488 Shikimate / quinate 5-dehydrogenase G7042_01660 PF00472 RF-1 domain G7042_01660 PF03462 PCRF domain G7042_01665 PF17827 PrmC N-terminal domain G7042_01665 PF13847 Methyltransferase domain G7042_01675 PF13369 Transglutaminase-like superfamily G7042_01680 PF00793 DAHP synthetase I family G7042_01700 PF01228 Glycine radical G7042_01705 PF13358 DDE superfamily endonuclease G7042_01705 PF13592 Winged helix-turn helix G7042_01710 PF03167 Uracil DNA glycosylase superfamily G7042_01725 PF00923 Transaldolase/Fructose-6-phosphate aldolase G7042_01730 PF01235 Sodium:alanine symporter family G7042_01735 PF11992 Domain of unknown function (DUF3488) G7042_01735 PF01841 Transglutaminase-like superfamily G7042_01735 PF13559 Domain of unknown function (DUF4129) G7042_01745 PF17863 AAA lid domain G7042_01745 PF07726 ATPase family associated with various cellular activities (AAA) G7042_01750 PF00144 Beta-lactamase G7042_01755 PF07690 Major Facilitator Superfamily G7042_01760 PF03466 LysR substrate binding domain G7042_01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_01765 PF03652 Holliday junction resolvase G7042_01770 PF02622 Uncharacterized ACR, COG1678 G7042_01775 PF13592 Winged helix-turn helix G7042_01775 PF13358 DDE superfamily endonuclease G7042_01790 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain G7042_01790 PF02951 Prokaryotic glutathione synthetase, N-terminal domain G7042_01795 PF04452 RNA methyltransferase G7042_01800 PF04231 Endonuclease I G7042_01805 PF10263 SprT-like family G7042_01805 PF17283 SprT-like zinc ribbon domain G7042_01810 PF02773 S-adenosylmethionine synthetase, C-terminal domain G7042_01810 PF02772 S-adenosylmethionine synthetase, central domain G7042_01810 PF00438 S-adenosylmethionine synthetase, N-terminal domain G7042_01815 PF00456 Transketolase, thiamine diphosphate binding domain G7042_01815 PF02779 Transketolase, pyrimidine binding domain G7042_01815 PF02780 Transketolase, C-terminal domain G7042_01820 PF13808 DDE_Tnp_1-associated G7042_01820 PF01609 Transposase DDE domain G7042_01835 PF01042 Endoribonuclease L-PSP G7042_01840 PF03702 Anhydro-N-acetylmuramic acid kinase G7042_01845 PF01476 LysM domain G7042_01845 PF01551 Peptidase family M23 G7042_01845 PF08525 Opacity-associated protein A N-terminal motif G7042_01850 PF00579 tRNA synthetases class I (W and Y) G7042_01870 PF00535 Glycosyl transferase family 2 G7042_01885 PF01471 Putative peptidoglycan binding domain G7042_01885 PF03734 L,D-transpeptidase catalytic domain G7042_01890 PF05951 Bacterial protein of unknown function (DUF882) G7042_01900 PF03458 UPF0126 domain G7042_01910 PF02463 RecF/RecN/SMC N terminal domain G7042_01910 PF06470 SMC proteins Flexible Hinge Domain G7042_01915 PF04354 ZipA, C-terminal FtsZ-binding domain G7042_01920 PF01653 NAD-dependent DNA ligase adenylation domain G7042_01920 PF12826 Helix-hairpin-helix motif G7042_01920 PF03119 NAD-dependent DNA ligase C4 zinc finger domain G7042_01920 PF03120 NAD-dependent DNA ligase OB-fold domain G7042_01920 PF00533 BRCA1 C Terminus (BRCT) domain G7042_01930 PF13597 Anaerobic ribonucleoside-triphosphate reductase G7042_01930 PF03477 ATP cone domain G7042_01945 PF01679 Proteolipid membrane potential modulator G7042_01965 PF00529 HlyD membrane-fusion protein of T1SS G7042_01965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G7042_01970 PF01047 MarR family G7042_01985 PF00589 Phage integrase family G7042_01985 PF13356 Arm DNA-binding domain G7042_01990 PF12794 Mechanosensitive ion channel inner membrane domain 1 G7042_01990 PF12795 Mechanosensitive ion channel porin domain G7042_01990 PF00924 Mechanosensitive ion channel G7042_01995 PF02887 Pyruvate kinase, alpha/beta domain G7042_01995 PF00224 Pyruvate kinase, barrel domain G7042_02005 PF04151 Bacterial pre-peptidase C-terminal domain G7042_02005 PF04389 Peptidase family M28 G7042_02010 PF02254 TrkA-N domain G7042_02010 PF00999 Sodium/hydrogen exchanger family G7042_02015 PF02254 TrkA-N domain G7042_02015 PF00999 Sodium/hydrogen exchanger family G7042_02025 PF04381 Putative exonuclease, RdgC G7042_02035 PF00149 Calcineurin-like phosphoesterase G7042_02035 PF12320 Type 5 capsule protein repressor C-terminal domain G7042_02040 PF13476 AAA domain G7042_02050 PF13808 DDE_Tnp_1-associated G7042_02050 PF01609 Transposase DDE domain G7042_02060 PF01292 Prokaryotic cytochrome b561 G7042_02070 PF00990 Diguanylate cyclase, GGDEF domain G7042_02075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 G7042_02080 PF05524 PEP-utilising enzyme, N-terminal G7042_02080 PF02896 PEP-utilising enzyme, TIM barrel domain G7042_02080 PF00391 PEP-utilising enzyme, mobile domain G7042_02085 PF00381 PTS HPr component phosphorylation site G7042_02090 PF00291 Pyridoxal-phosphate dependent enzyme G7042_02105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal G7042_02105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III G7042_02110 PF01980 tRNA-methyltransferase O G7042_02110 PF18389 TrmO C-terminal domain G7042_02130 PF00005 ABC transporter G7042_02130 PF00664 ABC transporter transmembrane region G7042_02135 PF00005 ABC transporter G7042_02135 PF00664 ABC transporter transmembrane region G7042_02150 PF00072 Response regulator receiver domain G7042_02150 PF00486 Transcriptional regulatory protein, C terminal G7042_02160 PF03737 Aldolase/RraA G7042_02175 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) G7042_02180 PF00588 SpoU rRNA Methylase family G7042_02185 PF03447 Homoserine dehydrogenase, NAD binding domain G7042_02185 PF00742 Homoserine dehydrogenase G7042_02185 PF13840 ACT domain G7042_02185 PF01842 ACT domain G7042_02185 PF00696 Amino acid kinase family G7042_02190 PF00288 GHMP kinases N terminal domain G7042_02190 PF08544 GHMP kinases C terminal G7042_02195 PF00291 Pyridoxal-phosphate dependent enzyme G7042_02195 PF14821 Threonine synthase N terminus G7042_02230 PF01048 Phosphorylase superfamily G7042_02245 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase G7042_02250 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase G7042_02250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G7042_02255 PF02690 Na+/Pi-cotransporter G7042_02260 PF00324 Amino acid permease G7042_02265 PF00324 Amino acid permease G7042_02270 PF00202 Aminotransferase class-III G7042_02275 PF00171 Aldehyde dehydrogenase family G7042_02280 PF07883 Cupin domain G7042_02280 PF01381 Helix-turn-helix G7042_02285 PF01266 FAD dependent oxidoreductase G7042_02300 PF07883 Cupin domain G7042_02300 PF12833 Helix-turn-helix domain G7042_02305 PF01609 Transposase DDE domain G7042_02305 PF13808 DDE_Tnp_1-associated G7042_02330 PF01739 CheR methyltransferase, SAM binding domain G7042_02330 PF03705 CheR methyltransferase, all-alpha domain G7042_02335 PF00672 HAMP domain G7042_02335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_02335 PF02203 Tar ligand binding domain homologue G7042_02340 PF01584 CheW-like domain G7042_02345 PF12729 Four helix bundle sensory module for signal transduction G7042_02345 PF00672 HAMP domain G7042_02345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_02360 PF00072 Response regulator receiver domain G7042_02365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_02365 PF00672 HAMP domain G7042_02365 PF02743 Cache domain G7042_02370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III G7042_02370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal G7042_02375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_02375 PF03466 LysR substrate binding domain G7042_02380 PF01810 LysE type translocator G7042_02395 PF06906 Protein of unknown function (DUF1272) G7042_02400 PF01209 ubiE/COQ5 methyltransferase family G7042_02405 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain G7042_02405 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain G7042_02410 PF12833 Helix-turn-helix domain G7042_02410 PF06029 AlkA N-terminal domain G7042_02410 PF02805 Metal binding domain of Ada G7042_02410 PF00730 HhH-GPD superfamily base excision DNA repair protein G7042_02420 PF02074 Carboxypeptidase Taq (M32) metallopeptidase G7042_02445 PF00106 short chain dehydrogenase G7042_02460 PF03573 outer membrane porin, OprD family G7042_02475 PF07995 Glucose / Sorbosone dehydrogenase G7042_02500 PF00800 Prephenate dehydratase G7042_02500 PF01817 Chorismate mutase type II G7042_02530 PF08349 Protein of unknown function (DUF1722) G7042_02535 PF13411 MerR HTH family regulatory protein G7042_02540 PF03441 FAD binding domain of DNA photolyase G7042_02540 PF00875 DNA photolyase G7042_02550 PF00106 short chain dehydrogenase G7042_02590 PF00210 Ferritin-like domain G7042_02595 PF03063 Prismane/CO dehydrogenase family G7042_02600 PF00175 Oxidoreductase NAD-binding domain G7042_02600 PF00970 Oxidoreductase FAD-binding domain G7042_02600 PF00111 2Fe-2S iron-sulfur cluster binding domain G7042_02605 PF16363 GDP-mannose 4,6 dehydratase G7042_02610 PF13462 Thioredoxin G7042_02610 PF06965 Na+/H+ antiporter 1 G7042_02620 PF06165 Glycosyltransferase family 36 G7042_02620 PF10091 Putative glucoamylase G7042_02620 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain G7042_02625 PF03466 LysR substrate binding domain G7042_02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_02630 PF03306 Alpha-acetolactate decarboxylase G7042_02635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G7042_02635 PF00205 Thiamine pyrophosphate enzyme, central domain G7042_02635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain G7042_02640 PF01965 DJ-1/PfpI family G7042_02645 PF02558 Ketopantoate reductase PanE/ApbA G7042_02645 PF08546 Ketopantoate reductase PanE/ApbA C terminal G7042_02650 PF04461 Protein of unknown function (DUF520) G7042_02655 PF03502 Nucleoside-specific channel-forming protein, Tsx G7042_02660 PF07690 Major Facilitator Superfamily G7042_02670 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD G7042_02680 PF05175 Methyltransferase small domain G7042_02685 PF01722 BolA-like protein G7042_02695 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) G7042_02695 PF11973 NQRA C-terminal domain G7042_02700 PF03116 NQR2, RnfD, RnfE family G7042_02705 PF04205 FMN-binding domain G7042_02710 PF02508 Rnf-Nqr subunit, membrane protein G7042_02715 PF02508 Rnf-Nqr subunit, membrane protein G7042_02720 PF00970 Oxidoreductase FAD-binding domain G7042_02720 PF00111 2Fe-2S iron-sulfur cluster binding domain G7042_02720 PF00175 Oxidoreductase NAD-binding domain G7042_02725 PF02424 ApbE family G7042_02740 PF11799 impB/mucB/samB family C-terminal domain G7042_02740 PF11798 IMS family HHH motif G7042_02740 PF00817 impB/mucB/samB family G7042_02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_02745 PF00672 HAMP domain G7042_02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_02750 PF03466 LysR substrate binding domain G7042_02760 PF04241 Protein of unknown function (DUF423) G7042_02765 PF18125 RlmM ferredoxin-like domain G7042_02765 PF01728 FtsJ-like methyltransferase G7042_02775 PF18324 Hypothetical protein TT1725 G7042_02775 PF00180 Isocitrate/isopropylmalate dehydrogenase G7042_02780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain G7042_02780 PF01367 5'-3' exonuclease, C-terminal SAM fold G7042_02785 PF11892 Domain of unknown function (DUF3412) G7042_02785 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases G7042_02785 PF03641 Possible lysine decarboxylase G7042_02790 PF00990 Diguanylate cyclase, GGDEF domain G7042_02800 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term G7042_02800 PF14489 QueF-like protein G7042_02805 PF07348 Syd protein (SUKH-2) G7042_02810 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) G7042_02835 PF04287 tRNA pseudouridine synthase C G7042_02840 PF00849 RNA pseudouridylate synthase G7042_02845 PF00258 Flavodoxin G7042_02850 PF01609 Transposase DDE domain G7042_02850 PF13808 DDE_Tnp_1-associated G7042_02855 PF02264 LamB porin G7042_02860 PF07148 Maltose operon periplasmic protein precursor (MalM) G7042_02865 PF00367 phosphotransferase system, EIIB G7042_02865 PF02378 Phosphotransferase system, EIIC G7042_02870 PF11944 Protein of unknown function (DUF3461) G7042_02875 PF00132 Bacterial transferase hexapeptide (six repeats) G7042_02875 PF14602 Hexapeptide repeat of succinyl-transferase G7042_02875 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal G7042_02880 PF01966 HD domain G7042_02880 PF01909 Nucleotidyltransferase domain G7042_02880 PF01842 ACT domain G7042_02880 PF08335 GlnD PII-uridylyltransferase G7042_02885 PF00557 Metallopeptidase family M24 G7042_02890 PF00318 Ribosomal protein S2 G7042_02895 PF00889 Elongation factor TS G7042_02900 PF00696 Amino acid kinase family G7042_02905 PF01765 Ribosome recycling factor G7042_02910 PF01255 Putative undecaprenyl diphosphate synthase G7042_02920 PF13288 DXP reductoisomerase C-terminal domain G7042_02920 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase G7042_02920 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain G7042_02925 PF17820 PDZ domain G7042_02925 PF02163 Peptidase family M50 G7042_02930 PF01103 Surface antigen G7042_02930 PF07244 Surface antigen variable number repeat G7042_02935 PF03938 Outer membrane protein (OmpH-like) G7042_02940 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD G7042_02940 PF00132 Bacterial transferase hexapeptide (six repeats) G7042_02945 PF07977 FabA-like domain G7042_02950 PF00132 Bacterial transferase hexapeptide (six repeats) G7042_02950 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 G7042_02955 PF02684 Lipid-A-disaccharide synthetase G7042_02960 PF01351 Ribonuclease HII G7042_02965 PF02811 PHP domain G7042_02965 PF01336 OB-fold nucleic acid binding domain G7042_02965 PF07733 Bacterial DNA polymerase III alpha NTPase domain G7042_02965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain G7042_02965 PF14579 Helix-hairpin-helix motif G7042_02970 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit G7042_02975 PF00486 Transcriptional regulatory protein, C terminal G7042_02975 PF18500 CadC C-terminal domain 1 G7042_02980 PF13520 Amino acid permease G7042_02985 PF01276 Orn/Lys/Arg decarboxylase, major domain G7042_02985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain G7042_02985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain G7042_02990 PF08543 Phosphomethylpyrimidine kinase G7042_03000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_03000 PF03466 LysR substrate binding domain G7042_03010 PF13520 Amino acid permease G7042_03015 PF13302 Acetyltransferase (GNAT) domain G7042_03020 PF00005 ABC transporter G7042_03020 PF16326 ABC transporter C-terminal domain G7042_03020 PF12848 ABC transporter G7042_03030 PF01431 Peptidase family M13 G7042_03030 PF05649 Peptidase family M13 G7042_03035 PF01171 PP-loop family G7042_03035 PF09179 TilS substrate binding domain G7042_03035 PF11734 TilS substrate C-terminal domain G7042_03040 PF00990 Diguanylate cyclase, GGDEF domain G7042_03045 PF02080 TrkA-C domain G7042_03045 PF00999 Sodium/hydrogen exchanger family G7042_03045 PF02254 TrkA-N domain G7042_03070 PF00072 Response regulator receiver domain G7042_03070 PF00196 Bacterial regulatory proteins, luxR family G7042_03080 PF00128 Alpha amylase, catalytic domain G7042_03090 PF01161 Phosphatidylethanolamine-binding protein G7042_03095 PF00709 Adenylosuccinate synthetase G7042_03100 PF03466 LysR substrate binding domain G7042_03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_03110 PF00155 Aminotransferase class I and II G7042_03115 PF07690 Major Facilitator Superfamily G7042_03120 PF03466 LysR substrate binding domain G7042_03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_03125 PF00106 short chain dehydrogenase G7042_03130 PF01343 Peptidase family S49 G7042_03130 PF08496 Peptidase family S49 N-terminal G7042_03135 PF04996 Succinylarginine dihydrolase G7042_03140 PF08272 Topoisomerase I zinc-ribbon-like G7042_03140 PF01396 Topoisomerase DNA binding C4 zinc finger G7042_03140 PF01131 DNA topoisomerase G7042_03140 PF01751 Toprim domain G7042_03155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_03155 PF08447 PAS fold G7042_03160 PF00728 Glycosyl hydrolase family 20, catalytic domain G7042_03160 PF02838 Glycosyl hydrolase family 20, domain 2 G7042_03165 PF01869 BadF/BadG/BcrA/BcrD ATPase family G7042_03175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_03175 PF00005 ABC transporter G7042_03180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_03180 PF00005 ABC transporter G7042_03185 PF12911 N-terminal TM domain of oligopeptide transport permease C G7042_03185 PF00528 Binding-protein-dependent transport system inner membrane component G7042_03190 PF00528 Binding-protein-dependent transport system inner membrane component G7042_03195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_03220 PF10725 Protein of unknown function (DUF2517) G7042_03230 PF08447 PAS fold G7042_03230 PF13426 PAS domain G7042_03230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_03240 PF04632 Fusaric acid resistance protein family G7042_03245 PF00994 Probable molybdopterin binding domain G7042_03245 PF03454 MoeA C-terminal region (domain IV) G7042_03245 PF03453 MoeA N-terminal region (domain I and II) G7042_03250 PF12804 MobA-like NTP transferase domain G7042_03255 PF00005 ABC transporter G7042_03260 PF00528 Binding-protein-dependent transport system inner membrane component G7042_03265 PF12849 PBP superfamily domain G7042_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_03275 PF00512 His Kinase A (phospho-acceptor) domain G7042_03275 PF00989 PAS fold G7042_03285 PF02634 FdhD/NarQ family G7042_03300 PF13808 DDE_Tnp_1-associated G7042_03300 PF01609 Transposase DDE domain G7042_03330 PF12838 4Fe-4S dicluster domain G7042_03330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain G7042_03330 PF00384 Molybdopterin oxidoreductase G7042_03330 PF01568 Molydopterin dinucleotide binding domain G7042_03330 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region G7042_03335 PF13247 4Fe-4S dicluster domain G7042_03350 PF00390 Malic enzyme, N-terminal domain G7042_03350 PF03949 Malic enzyme, NAD binding domain G7042_03355 PF00860 Permease family G7042_03360 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_03380 PF03949 Malic enzyme, NAD binding domain G7042_03380 PF00390 Malic enzyme, N-terminal domain G7042_03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_03385 PF17203 Single cache domain 3 G7042_03385 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain G7042_03385 PF00989 PAS fold G7042_03390 PF00072 Response regulator receiver domain G7042_03390 PF12431 Transcriptional regulator G7042_03400 PF00248 Aldo/keto reductase family G7042_03410 PF00892 EamA-like transporter family G7042_03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_03420 PF03466 LysR substrate binding domain G7042_03430 PF12697 Alpha/beta hydrolase family G7042_03435 PF01361 Tautomerase enzyme G7042_03440 PF00171 Aldehyde dehydrogenase family G7042_03445 PF00158 Sigma-54 interaction domain G7042_03445 PF02954 Bacterial regulatory protein, Fis family G7042_03445 PF01590 GAF domain G7042_03450 PF00990 Diguanylate cyclase, GGDEF domain G7042_03450 PF07694 5TMR of 5TMR-LYT G7042_03455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G7042_03460 PF00072 Response regulator receiver domain G7042_03460 PF00486 Transcriptional regulatory protein, C terminal G7042_03465 PF00989 PAS fold G7042_03465 PF00512 His Kinase A (phospho-acceptor) domain G7042_03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_03465 PF11808 Phosphate regulon sensor protein PhoR G7042_03470 PF12849 PBP superfamily domain G7042_03475 PF01435 Peptidase family M48 G7042_03485 PF00480 ROK family G7042_03490 PF03932 CutC family G7042_03495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G7042_03495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase G7042_03500 PF00005 ABC transporter G7042_03520 PF00293 NUDIX domain G7042_03530 PF08534 Redoxin G7042_03530 PF00462 Glutaredoxin G7042_03535 PF01699 Sodium/calcium exchanger protein G7042_03540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain G7042_03540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain G7042_03545 PF01235 Sodium:alanine symporter family G7042_03555 PF00860 Permease family G7042_03560 PF00990 Diguanylate cyclase, GGDEF domain G7042_03560 PF00072 Response regulator receiver domain G7042_03565 PF10692 Protein of unknown function (DUF2498) G7042_03570 PF01554 MatE G7042_03575 PF12833 Helix-turn-helix domain G7042_03580 PF00390 Malic enzyme, N-terminal domain G7042_03580 PF03949 Malic enzyme, NAD binding domain G7042_03585 PF01389 OmpA-like transmembrane domain G7042_03585 PF00691 OmpA family G7042_03590 PF01389 OmpA-like transmembrane domain G7042_03590 PF00691 OmpA family G7042_03595 PF01389 OmpA-like transmembrane domain G7042_03595 PF00691 OmpA family G7042_03615 PF00209 Sodium:neurotransmitter symporter family G7042_03620 PF01734 Patatin-like phospholipase G7042_03625 PF05230 MASE2 domain G7042_03625 PF00990 Diguanylate cyclase, GGDEF domain G7042_03630 PF13533 Biotin-lipoyl like G7042_03635 PF00873 AcrB/AcrD/AcrF family G7042_03645 PF08497 Radical SAM N-terminal G7042_03645 PF04055 Radical SAM superfamily G7042_03645 PF11842 Domain of unknown function (DUF3362) G7042_03660 PF13358 DDE superfamily endonuclease G7042_03660 PF13592 Winged helix-turn helix G7042_03665 PF01609 Transposase DDE domain G7042_03665 PF13808 DDE_Tnp_1-associated G7042_03680 PF02075 Crossover junction endodeoxyribonuclease RuvC G7042_03685 PF00230 Major intrinsic protein G7042_03690 PF10145 Phage-related minor tail protein G7042_03690 PF01464 Transglycosylase SLT domain G7042_03690 PF01551 Peptidase family M23 G7042_03695 PF00128 Alpha amylase, catalytic domain G7042_03700 PF01551 Peptidase family M23 G7042_03715 PF13396 Phospholipase_D-nuclease N-terminal G7042_03715 PF13091 PLD-like domain G7042_03725 PF00551 Formyl transferase G7042_03725 PF01842 ACT domain G7042_03730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase G7042_03745 PF01648 4'-phosphopantetheinyl transferase superfamily G7042_03750 PF00877 NlpC/P60 family G7042_03755 PF05971 RNA methyltransferase G7042_03760 PF01575 MaoC like domain G7042_03770 PF01476 LysM domain G7042_03770 PF03734 L,D-transpeptidase catalytic domain G7042_03770 PF17969 L,D-transpeptidase C-terminal domain G7042_03820 PF09317 Domain of unknown function (DUF1974) G7042_03820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain G7042_03820 PF02770 Acyl-CoA dehydrogenase, middle domain G7042_03820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain G7042_03825 PF00873 AcrB/AcrD/AcrF family G7042_03835 PF02887 Pyruvate kinase, alpha/beta domain G7042_03835 PF00224 Pyruvate kinase, barrel domain G7042_03840 PF01418 Helix-turn-helix domain, rpiR family G7042_03840 PF01380 SIS domain G7042_03845 PF02685 Glucokinase G7042_03865 PF00919 Uncharacterized protein family UPF0004 G7042_03865 PF18693 TRAM domain G7042_03865 PF04055 Radical SAM superfamily G7042_03870 PF00072 Response regulator receiver domain G7042_03885 PF02001 Protein of unknown function DUF134 G7042_03915 PF02154 Flagellar motor switch protein FliM G7042_03915 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term G7042_03920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term G7042_03925 PF04347 Flagellar biosynthesis protein, FliO G7042_03930 PF00813 FliP family G7042_03935 PF01313 Bacterial export proteins, family 3 G7042_03940 PF01311 Bacterial export proteins, family 1 G7042_03945 PF01312 FlhB HrpN YscU SpaS Family G7042_03950 PF00771 FHIPEP family G7042_03955 PF00448 SRP54-type protein, GTPase domain G7042_03960 PF10609 NUBPL iron-transfer P-loop NTPase G7042_03965 PF04545 Sigma-70, region 4 G7042_03965 PF04539 Sigma-70 region 3 G7042_03965 PF04542 Sigma-70 region 2 G7042_03970 PF00072 Response regulator receiver domain G7042_03975 PF04344 Chemotaxis phosphatase, CheZ G7042_03980 PF13592 Winged helix-turn helix G7042_03980 PF13358 DDE superfamily endonuclease G7042_03985 PF10417 C-terminal domain of 1-Cys peroxiredoxin G7042_03985 PF00578 AhpC/TSA family G7042_04005 PF08003 Protein of unknown function (DUF1698) G7042_04010 PF13649 Methyltransferase domain G7042_04030 PF01336 OB-fold nucleic acid binding domain G7042_04030 PF00152 tRNA synthetases class II (D, K and N) G7042_04030 PF02938 GAD domain G7042_04035 PF01709 Transcriptional regulator G7042_04040 PF08019 Phosphoethanolamine transferase EptA/EptB G7042_04040 PF00884 Sulfatase G7042_04045 PF03173 Putative carbohydrate binding domain G7042_04045 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain G7042_04045 PF02838 Glycosyl hydrolase family 20, domain 2 G7042_04045 PF00728 Glycosyl hydrolase family 20, catalytic domain G7042_04065 PF00501 AMP-binding enzyme G7042_04065 PF13193 AMP-binding enzyme C-terminal domain G7042_04065 PF00668 Condensation domain G7042_04065 PF00550 Phosphopantetheine attachment site G7042_04105 PF01047 MarR family G7042_04105 PF00480 ROK family G7042_04110 PF01979 Amidohydrolase family G7042_04115 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase G7042_04130 PF00728 Glycosyl hydrolase family 20, catalytic domain G7042_04130 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain G7042_04130 PF02838 Glycosyl hydrolase family 20, domain 2 G7042_04130 PF03173 Putative carbohydrate binding domain G7042_04135 PF00749 tRNA synthetases class I (E and Q), catalytic domain G7042_04135 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain G7042_04140 PF01475 Ferric uptake regulator family G7042_04150 PF00258 Flavodoxin G7042_04155 PF01402 Ribbon-helix-helix protein, copG family G7042_04165 PF12697 Alpha/beta hydrolase family G7042_04170 PF03925 SeqA protein C-terminal domain G7042_04170 PF17206 SeqA protein N-terminal domain G7042_04175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain G7042_04175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III G7042_04175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II G7042_04175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I G7042_04185 PF01047 MarR family G7042_04190 PF13406 Transglycosylase SLT domain G7042_04195 PF01066 CDP-alcohol phosphatidyltransferase G7042_04200 PF00005 ABC transporter G7042_04205 PF00528 Binding-protein-dependent transport system inner membrane component G7042_04210 PF13416 Bacterial extracellular solute-binding protein G7042_04215 PF00403 Heavy-metal-associated domain G7042_04215 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_04215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G7042_04220 PF02627 Carboxymuconolactone decarboxylase family G7042_04230 PF01625 Peptide methionine sulfoxide reductase G7042_04250 PF01103 Surface antigen G7042_04250 PF07244 Surface antigen variable number repeat G7042_04250 PF17243 POTRA domain TamA domain 1 G7042_04255 PF04357 TamB, inner membrane protein subunit of TAM complex G7042_04270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein G7042_04275 PF00563 EAL domain G7042_04275 PF00990 Diguanylate cyclase, GGDEF domain G7042_04275 PF03707 Bacterial signalling protein N terminal repeat G7042_04280 PF01464 Transglycosylase SLT domain G7042_04280 PF14718 Soluble lytic murein transglycosylase L domain G7042_04285 PF00356 Bacterial regulatory proteins, lacI family G7042_04295 PF03061 Thioesterase superfamily G7042_04300 PF03372 Endonuclease/Exonuclease/phosphatase family G7042_04305 PF01464 Transglycosylase SLT domain G7042_04305 PF01476 LysM domain G7042_04310 PF00753 Metallo-beta-lactamase superfamily G7042_04310 PF16123 Hydroxyacylglutathione hydrolase C-terminus G7042_04315 PF08241 Methyltransferase domain G7042_04320 PF00075 RNase H G7042_04325 PF00929 Exonuclease G7042_04335 PF11849 Domain of unknown function (DUF3369) G7042_04340 PF09317 Domain of unknown function (DUF1974) G7042_04340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain G7042_04340 PF02770 Acyl-CoA dehydrogenase, middle domain G7042_04340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain G7042_04345 PF13580 SIS domain G7042_04350 PF13230 Glutamine amidotransferases class-II G7042_04360 PF01933 Uncharacterised protein family UPF0052 G7042_04370 PF00072 Response regulator receiver domain G7042_04370 PF01627 Hpt domain G7042_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_04370 PF00672 HAMP domain G7042_04370 PF17149 Periplasmic sensor domain found in signal transduction proteins G7042_04370 PF00512 His Kinase A (phospho-acceptor) domain G7042_04380 PF00196 Bacterial regulatory proteins, luxR family G7042_04380 PF00072 Response regulator receiver domain G7042_04385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term G7042_04385 PF07730 Histidine kinase G7042_04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_04385 PF00672 HAMP domain G7042_04390 PF04055 Radical SAM superfamily G7042_04390 PF06463 Molybdenum Cofactor Synthesis C G7042_04395 PF13187 4Fe-4S dicluster domain G7042_04395 PF12838 4Fe-4S dicluster domain G7042_04405 PF00384 Molybdopterin oxidoreductase G7042_04405 PF10518 TAT (twin-arginine translocation) pathway signal sequence G7042_04405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain G7042_04405 PF01568 Molydopterin dinucleotide binding domain G7042_04410 PF12800 4Fe-4S binding domain G7042_04410 PF12838 4Fe-4S dicluster domain G7042_04415 PF12837 4Fe-4S binding domain G7042_04415 PF12801 4Fe-4S binding domain G7042_04420 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) G7042_04425 PF03264 NapC/NirT cytochrome c family, N-terminal region G7042_04430 PF00994 Probable molybdopterin binding domain G7042_04435 PF01967 MoaC family G7042_04440 PF02597 ThiS family G7042_04445 PF02391 MoaE protein G7042_04455 PF00528 Binding-protein-dependent transport system inner membrane component G7042_04460 PF03459 TOBE domain G7042_04460 PF00005 ABC transporter G7042_04465 PF00561 alpha/beta hydrolase fold G7042_04470 PF06406 StbA protein G7042_04480 PF06291 Bor protein G7042_04485 PF06291 Bor protein G7042_04490 PF00899 ThiF family G7042_04495 PF00994 Probable molybdopterin binding domain G7042_04495 PF03454 MoeA C-terminal region (domain IV) G7042_04495 PF03453 MoeA N-terminal region (domain I and II) G7042_04500 PF01227 GTP cyclohydrolase I G7042_04505 PF00672 HAMP domain G7042_04505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_04505 PF17200 Single Cache domain 2 G7042_04510 PF01268 Formate--tetrahydrofolate ligase G7042_04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_04520 PF03466 LysR substrate binding domain G7042_04525 PF04264 YceI-like domain G7042_04550 PF07687 Peptidase dimerisation domain G7042_04550 PF01546 Peptidase family M20/M25/M40 G7042_04560 PF17810 Arginine decarboxylase helical bundle domain G7042_04560 PF17944 Arginine decarboxylase C-terminal helical extension G7042_04560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain G7042_04575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G7042_04585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase G7042_04585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain G7042_04590 PF00849 RNA pseudouridylate synthase G7042_04590 PF01479 S4 domain G7042_04595 PF07690 Major Facilitator Superfamily G7042_04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_04605 PF03466 LysR substrate binding domain G7042_04615 PF10689 Protein of unknown function (DUF2496) G7042_04625 PF04391 Protein of unknown function (DUF533) G7042_04630 PF00155 Aminotransferase class I and II G7042_04630 PF00392 Bacterial regulatory proteins, gntR family G7042_04635 PF01654 Cytochrome bd terminal oxidase subunit I G7042_04660 PF07690 Major Facilitator Superfamily G7042_04665 PF00248 Aldo/keto reductase family G7042_04670 PF03992 Antibiotic biosynthesis monooxygenase G7042_04695 PF03466 LysR substrate binding domain G7042_04695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_04700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain G7042_04700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain G7042_04705 PF00230 Major intrinsic protein G7042_04710 PF07690 Major Facilitator Superfamily G7042_04715 PF00455 DeoR C terminal sensor domain G7042_04715 PF08220 DeoR-like helix-turn-helix domain G7042_04725 PF01266 FAD dependent oxidoreductase G7042_04725 PF16901 C-terminal domain of alpha-glycerophosphate oxidase G7042_04730 PF03009 Glycerophosphoryl diester phosphodiesterase family G7042_04735 PF00793 DAHP synthetase I family G7042_04740 PF02153 Prephenate dehydrogenase G7042_04740 PF01817 Chorismate mutase type II G7042_04745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_04745 PF03466 LysR substrate binding domain G7042_04750 PF04219 Protein of unknown function, DUF G7042_04755 PF03974 Ecotin G7042_04775 PF00326 Prolyl oligopeptidase family G7042_04775 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain G7042_04795 PF11893 Domain of unknown function (DUF3413) G7042_04795 PF00884 Sulfatase G7042_04800 PF07208 Protein of unknown function (DUF1414) G7042_04805 PF04245 37-kD nucleoid-associated bacterial protein G7042_04810 PF01547 Bacterial extracellular solute-binding protein G7042_04820 PF00528 Binding-protein-dependent transport system inner membrane component G7042_04825 PF00005 ABC transporter G7042_04825 PF08402 TOBE domain G7042_04830 PF03976 Polyphosphate kinase 2 (PPK2) G7042_04835 PF00561 alpha/beta hydrolase fold G7042_04840 PF01594 AI-2E family transporter G7042_04845 PF01206 Sulfurtransferase TusA G7042_04850 PF01435 Peptidase family M48 G7042_04850 PF07720 Tetratricopeptide repeat G7042_04860 PF03960 ArsC family G7042_04870 PF04336 Acyl carrier protein phosphodiesterase G7042_04875 PF03956 Lysine exporter LysO G7042_04880 PF00005 ABC transporter G7042_04885 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_04890 PF00528 Binding-protein-dependent transport system inner membrane component G7042_04895 PF00528 Binding-protein-dependent transport system inner membrane component G7042_04910 PF04055 Radical SAM superfamily G7042_04915 PF03707 Bacterial signalling protein N terminal repeat G7042_04915 PF00563 EAL domain G7042_04915 PF00990 Diguanylate cyclase, GGDEF domain G7042_04920 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_04920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G7042_04925 PF07703 Alpha-2-macroglobulin bait region domain G7042_04925 PF00207 Alpha-2-macroglobulin family G7042_04925 PF07678 A-macroglobulin TED domain G7042_04925 PF01835 MG2 domain G7042_04925 PF17962 Bacterial macroglobulin domain 6 G7042_04925 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain G7042_04925 PF11974 Bacterial alpha-2-macroglobulin MG3 domain G7042_04925 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain G7042_04925 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain G7042_04930 PF00905 Penicillin binding protein transpeptidase domain G7042_04930 PF06832 Penicillin-Binding Protein C-terminus Family G7042_04930 PF00912 Transglycosylase G7042_04940 PF02926 THUMP domain G7042_04940 PF02568 Thiamine biosynthesis protein (ThiI) G7042_04950 PF03458 UPF0126 domain G7042_04955 PF00669 Bacterial flagellin N-terminal helical region G7042_04955 PF00700 Bacterial flagellin C-terminal helical region G7042_04955 PF07196 Flagellin hook IN motif G7042_04970 PF07196 Flagellin hook IN motif G7042_04970 PF07195 Flagellar hook-associated protein 2 C-terminus G7042_04970 PF02465 Flagellar hook-associated protein 2 N-terminus G7042_04975 PF02561 Flagellar protein FliS G7042_04985 PF01497 Periplasmic binding protein G7042_04995 PF01048 Phosphorylase superfamily G7042_05005 PF02535 ZIP Zinc transporter G7042_05010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_05010 PF00672 HAMP domain G7042_05015 PF00459 Inositol monophosphatase family G7042_05025 PF00043 Glutathione S-transferase, C-terminal domain G7042_05025 PF02798 Glutathione S-transferase, N-terminal domain G7042_05035 PF00528 Binding-protein-dependent transport system inner membrane component G7042_05040 PF00528 Binding-protein-dependent transport system inner membrane component G7042_05040 PF12911 N-terminal TM domain of oligopeptide transport permease C G7042_05045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_05045 PF00005 ABC transporter G7042_05050 PF07690 Major Facilitator Superfamily G7042_05055 PF03466 LysR substrate binding domain G7042_05055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_05060 PF02634 FdhD/NarQ family G7042_05065 PF00384 Molybdopterin oxidoreductase G7042_05075 PF05164 Cell division protein ZapA G7042_05080 PF03695 Uncharacterised protein family (UPF0149) G7042_05085 PF01494 FAD binding domain G7042_05090 PF01494 FAD binding domain G7042_05095 PF08669 Glycine cleavage T-protein C-terminal barrel domain G7042_05095 PF01571 Aminomethyltransferase folate-binding domain G7042_05100 PF01597 Glycine cleavage H-protein G7042_05105 PF02347 Glycine cleavage system P-protein G7042_05115 PF07690 Major Facilitator Superfamily G7042_05120 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_05120 PF13192 Thioredoxin domain G7042_05125 PF00578 AhpC/TSA family G7042_05125 PF10417 C-terminal domain of 1-Cys peroxiredoxin G7042_05130 PF00571 CBS domain G7042_05135 PF02547 Queuosine biosynthesis protein G7042_05140 PF01702 Queuine tRNA-ribosyltransferase G7042_05145 PF02699 Preprotein translocase subunit G7042_05150 PF07549 SecD/SecF GG Motif G7042_05150 PF02355 Protein export membrane protein G7042_05150 PF13721 SecD export protein N-terminal TM region G7042_05155 PF02355 Protein export membrane protein G7042_05155 PF07549 SecD/SecF GG Motif G7042_05160 PF00581 Rhodanese-like domain G7042_05165 PF07719 Tetratricopeptide repeat G7042_05165 PF13181 Tetratricopeptide repeat G7042_05170 PF01136 Peptidase family U32 G7042_05175 PF01136 Peptidase family U32 G7042_05180 PF02036 SCP-2 sterol transfer family G7042_05190 PF00588 SpoU rRNA Methylase family G7042_05195 PF02082 Transcriptional regulator G7042_05200 PF00266 Aminotransferase class-V G7042_05205 PF01592 NifU-like N terminal domain G7042_05210 PF01521 Iron-sulphur cluster biosynthesis G7042_05215 PF00226 DnaJ domain G7042_05215 PF07743 HSCB C-terminal oligomerisation domain G7042_05220 PF00012 Hsp70 protein G7042_05225 PF00111 2Fe-2S iron-sulfur cluster binding domain G7042_05230 PF12404 Peptidase G7042_05230 PF00883 Cytosol aminopeptidase family, catalytic domain G7042_05235 PF12404 Peptidase G7042_05235 PF00883 Cytosol aminopeptidase family, catalytic domain G7042_05240 PF00334 Nucleoside diphosphate kinase G7042_05245 PF04055 Radical SAM superfamily G7042_05255 PF13464 Domain of unknown function (DUF4115) G7042_05260 PF04551 GcpE protein G7042_05265 PF13393 Histidyl-tRNA synthetase G7042_05265 PF03129 Anticodon binding domain G7042_05270 PF09976 Tetratricopeptide repeat-like domain G7042_05275 PF13360 PQQ-like domain G7042_05280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal G7042_05280 PF01926 50S ribosome-binding GTPase G7042_05285 PF07191 zinc-ribbons G7042_05295 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_05295 PF01464 Transglycosylase SLT domain G7042_05300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain G7042_05300 PF02769 AIR synthase related protein, C-terminal domain G7042_05300 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal G7042_05310 PF05661 Protein of unknown function (DUF808) G7042_05315 PF01432 Peptidase family M3 G7042_05315 PF08439 Oligopeptidase F G7042_05325 PF01609 Transposase DDE domain G7042_05325 PF13808 DDE_Tnp_1-associated G7042_05350 PF04055 Radical SAM superfamily G7042_05350 PF16199 Radical_SAM C-terminal domain G7042_05355 PF00005 ABC transporter G7042_05355 PF00664 ABC transporter transmembrane region G7042_05355 PF03412 Peptidase C39 family G7042_05430 PF07055 Enoyl reductase FAD binding domain G7042_05430 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase G7042_05430 PF12241 Trans-2-enoyl-CoA reductase catalytic region G7042_05435 PF03606 C4-dicarboxylate anaerobic carrier G7042_05440 PF00155 Aminotransferase class I and II G7042_05450 PF00462 Glutaredoxin G7042_05455 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family G7042_05460 PF00271 Helicase conserved C-terminal domain G7042_05460 PF04851 Type III restriction enzyme, res subunit G7042_05465 PF00529 HlyD membrane-fusion protein of T1SS G7042_05465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G7042_05470 PF11742 Protein of unknown function (DUF3302) G7042_05475 PF02554 Carbon starvation protein CstA G7042_05480 PF00072 Response regulator receiver domain G7042_05480 PF04397 LytTr DNA-binding domain G7042_05485 PF07694 5TMR of 5TMR-LYT G7042_05485 PF06580 Histidine kinase G7042_05505 PF00465 Iron-containing alcohol dehydrogenase G7042_05505 PF00171 Aldehyde dehydrogenase family G7042_05515 PF01914 MarC family integral membrane protein G7042_05520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_05525 PF00528 Binding-protein-dependent transport system inner membrane component G7042_05530 PF00528 Binding-protein-dependent transport system inner membrane component G7042_05530 PF12911 N-terminal TM domain of oligopeptide transport permease C G7042_05535 PF00005 ABC transporter G7042_05535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_05545 PF00005 ABC transporter G7042_05545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_05550 PF03741 Integral membrane protein TerC family G7042_05555 PF00842 Alanine racemase, C-terminal domain G7042_05555 PF01168 Alanine racemase, N-terminal domain G7042_05565 PF00375 Sodium:dicarboxylate symporter family G7042_05580 PF01979 Amidohydrolase family G7042_05590 PF00672 HAMP domain G7042_05590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_05595 PF01230 HIT domain G7042_05630 PF02355 Protein export membrane protein G7042_05630 PF13721 SecD export protein N-terminal TM region G7042_05630 PF07549 SecD/SecF GG Motif G7042_05635 PF02355 Protein export membrane protein G7042_05635 PF07549 SecD/SecF GG Motif G7042_05640 PF13426 PAS domain G7042_05640 PF08447 PAS fold G7042_05640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_05655 PF01609 Transposase DDE domain G7042_05655 PF13808 DDE_Tnp_1-associated G7042_05670 PF00361 Proton-conducting membrane transporter G7042_05675 PF00361 Proton-conducting membrane transporter G7042_05680 PF00361 Proton-conducting membrane transporter G7042_05680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus G7042_05685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L G7042_05690 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 G7042_05695 PF12838 4Fe-4S dicluster domain G7042_05700 PF00146 NADH dehydrogenase G7042_05705 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region G7042_05705 PF00384 Molybdopterin oxidoreductase G7042_05705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain G7042_05710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit G7042_05710 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region G7042_05720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit G7042_05720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit G7042_05725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit G7042_05730 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 G7042_05735 PF13677 Membrane MotB of proton-channel complex MotA/MotB G7042_05735 PF00691 OmpA family G7042_05755 PF04536 TPM domain G7042_05765 PF03411 Penicillin-insensitive murein endopeptidase G7042_05770 PF00528 Binding-protein-dependent transport system inner membrane component G7042_05775 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_05780 PF00528 Binding-protein-dependent transport system inner membrane component G7042_05785 PF00005 ABC transporter G7042_05795 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) G7042_05800 PF00248 Aldo/keto reductase family G7042_05810 PF00106 short chain dehydrogenase G7042_05815 PF01212 Beta-eliminating lyase G7042_05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_05830 PF03466 LysR substrate binding domain G7042_05840 PF13358 DDE superfamily endonuclease G7042_05840 PF13592 Winged helix-turn helix G7042_05845 PF00563 EAL domain G7042_05845 PF00990 Diguanylate cyclase, GGDEF domain G7042_05845 PF03707 Bacterial signalling protein N terminal repeat G7042_05845 PF13188 PAS domain G7042_05850 PF00881 Nitroreductase family G7042_05865 PF07690 Major Facilitator Superfamily G7042_05870 PF03466 LysR substrate binding domain G7042_05870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_05875 PF03466 LysR substrate binding domain G7042_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_05880 PF00925 GTP cyclohydrolase II G7042_05885 PF02224 Cytidylate kinase G7042_05890 PF00575 S1 RNA binding domain G7042_05895 PF00216 Bacterial DNA-binding protein G7042_05905 PF18073 Rubredoxin metal binding domain G7042_05910 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family G7042_05925 PF06508 Queuosine biosynthesis protein QueC G7042_05930 PF04055 Radical SAM superfamily G7042_05935 PF12843 Putative quorum-sensing-regulated virulence factor G7042_05940 PF01923 Cobalamin adenosyltransferase G7042_05945 PF00816 H-NS histone family G7042_05955 PF13358 DDE superfamily endonuclease G7042_05955 PF13592 Winged helix-turn helix G7042_05960 PF03553 Na+/H+ antiporter family G7042_05965 PF00265 Thymidine kinase G7042_05975 PF10722 Putative bacterial sensory transduction regulator G7042_05985 PF00842 Alanine racemase, C-terminal domain G7042_05985 PF01168 Alanine racemase, N-terminal domain G7042_06000 PF01609 Transposase DDE domain G7042_06000 PF13808 DDE_Tnp_1-associated G7042_06010 PF13247 4Fe-4S dicluster domain G7042_06015 PF03916 Polysulphide reductase, NrfD G7042_06020 PF00374 Nickel-dependent hydrogenase G7042_06025 PF01750 Hydrogenase maturation protease G7042_06030 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE G7042_06035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_06040 PF00528 Binding-protein-dependent transport system inner membrane component G7042_06045 PF12911 N-terminal TM domain of oligopeptide transport permease C G7042_06045 PF00528 Binding-protein-dependent transport system inner membrane component G7042_06050 PF00005 ABC transporter G7042_06055 PF08402 TOBE domain G7042_06055 PF00005 ABC transporter G7042_06060 PF02492 CobW/HypB/UreG, nucleotide-binding domain G7042_06065 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA G7042_06070 PF00586 AIR synthase related protein, N-terminal domain G7042_06070 PF02769 AIR synthase related protein, C-terminal domain G7042_06075 PF01924 Hydrogenase formation hypA family G7042_06080 PF01455 HupF/HypC family G7042_06085 PF00708 Acylphosphatase G7042_06085 PF07503 HypF finger G7042_06085 PF01300 Telomere recombination G7042_06085 PF17788 HypF Kae1-like domain G7042_06090 PF00009 Elongation factor Tu GTP binding domain G7042_06090 PF03144 Elongation factor Tu domain 2 G7042_06090 PF09105 Elongation factor SelB, winged helix G7042_06090 PF09107 Elongation factor SelB, winged helix G7042_06090 PF09106 Elongation factor SelB, winged helix G7042_06095 PF12390 Selenocysteine synthase N terminal G7042_06095 PF03841 L-seryl-tRNA selenium transferase G7042_06105 PF01750 Hydrogenase maturation protease G7042_06110 PF07450 Formate hydrogenlyase maturation protein HycH G7042_06115 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit G7042_06120 PF12838 4Fe-4S dicluster domain G7042_06125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit G7042_06125 PF00374 Nickel-dependent hydrogenase G7042_06125 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit G7042_06130 PF00146 NADH dehydrogenase G7042_06135 PF00361 Proton-conducting membrane transporter G7042_06140 PF00037 4Fe-4S binding domain G7042_06140 PF12798 4Fe-4S binding domain G7042_06165 PF07693 KAP family P-loop domain G7042_06185 PF02954 Bacterial regulatory protein, Fis family G7042_06185 PF01590 GAF domain G7042_06185 PF00158 Sigma-54 interaction domain G7042_06190 PF02634 FdhD/NarQ family G7042_06195 PF13662 Toprim domain G7042_06195 PF02132 RecR protein G7042_06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_06200 PF00183 Hsp90 protein G7042_06205 PF05191 Adenylate kinase, active site lid G7042_06210 PF00762 Ferrochelatase G7042_06215 PF01124 MAPEG family G7042_06220 PF00294 pfkB family carbohydrate kinase G7042_06225 PF17200 Single Cache domain 2 G7042_06225 PF00672 HAMP domain G7042_06225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_06270 PF07273 Protein of unknown function (DUF1439) G7042_06275 PF00425 chorismate binding enzyme G7042_06280 PF13193 AMP-binding enzyme C-terminal domain G7042_06280 PF00501 AMP-binding enzyme G7042_06285 PF00857 Isochorismatase family G7042_06285 PF00550 Phosphopantetheine attachment site G7042_06290 PF13193 AMP-binding enzyme C-terminal domain G7042_06290 PF00668 Condensation domain G7042_06290 PF00550 Phosphopantetheine attachment site G7042_06290 PF00975 Thioesterase domain G7042_06290 PF00501 AMP-binding enzyme G7042_06300 PF00550 Phosphopantetheine attachment site G7042_06300 PF07993 Male sterility protein G7042_06300 PF00668 Condensation domain G7042_06300 PF00501 AMP-binding enzyme G7042_06300 PF13193 AMP-binding enzyme C-terminal domain G7042_06305 PF00109 Beta-ketoacyl synthase, N-terminal domain G7042_06305 PF14765 Polyketide synthase dehydratase G7042_06305 PF00668 Condensation domain G7042_06305 PF13193 AMP-binding enzyme C-terminal domain G7042_06305 PF00550 Phosphopantetheine attachment site G7042_06305 PF00501 AMP-binding enzyme G7042_06305 PF08659 KR domain G7042_06305 PF16197 Ketoacyl-synthetase C-terminal extension G7042_06305 PF02801 Beta-ketoacyl synthase, C-terminal domain G7042_06310 PF01497 Periplasmic binding protein G7042_06315 PF17837 4'-phosphopantetheinyl transferase N-terminal domain G7042_06315 PF01648 4'-phosphopantetheinyl transferase superfamily G7042_06320 PF00005 ABC transporter G7042_06325 PF01032 FecCD transport family G7042_06330 PF01032 FecCD transport family G7042_06335 PF00593 TonB dependent receptor G7042_06335 PF07715 TonB-dependent Receptor Plug Domain G7042_06350 PF11143 Protein of unknown function (DUF2919) G7042_06355 PF01544 CorA-like Mg2+ transporter protein G7042_06370 PF01012 Electron transfer flavoprotein domain G7042_06375 PF01012 Electron transfer flavoprotein domain G7042_06375 PF00766 Electron transfer flavoprotein FAD-binding domain G7042_06380 PF00266 Aminotransferase class-V G7042_06385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) G7042_06390 PF00793 DAHP synthetase I family G7042_06395 PF00672 HAMP domain G7042_06395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_06400 PF04055 Radical SAM superfamily G7042_06405 PF02601 Exonuclease VII, large subunit G7042_06405 PF13742 OB-fold nucleic acid binding domain G7042_06425 PF13808 DDE_Tnp_1-associated G7042_06425 PF01609 Transposase DDE domain G7042_06430 PF02472 Biopolymer transport protein ExbD/TolR G7042_06435 PF01618 MotA/TolQ/ExbB proton channel family G7042_06450 PF00478 IMP dehydrogenase / GMP reductase domain G7042_06450 PF00571 CBS domain G7042_06455 PF02540 NAD synthase G7042_06455 PF00117 Glutamine amidotransferase class-I G7042_06455 PF00958 GMP synthase C terminal domain G7042_06505 PF05724 Thiopurine S-methyltransferase (TPMT) G7042_06515 PF00300 Histidine phosphatase superfamily (branch 1) G7042_06525 PF00892 EamA-like transporter family G7042_06530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_06535 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain G7042_06540 PF02559 CarD-like/TRCF domain G7042_06540 PF00270 DEAD/DEAH box helicase G7042_06540 PF17757 UvrB interaction domain G7042_06540 PF00271 Helicase conserved C-terminal domain G7042_06540 PF03461 TRCF domain G7042_06550 PF12704 MacB-like periplasmic core domain G7042_06550 PF02687 FtsX-like permease family G7042_06555 PF00005 ABC transporter G7042_06560 PF12704 MacB-like periplasmic core domain G7042_06560 PF02687 FtsX-like permease family G7042_06575 PF05697 Bacterial trigger factor protein (TF) G7042_06575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G7042_06575 PF05698 Bacterial trigger factor protein (TF) C-terminus G7042_06580 PF00574 Clp protease G7042_06585 PF10431 C-terminal, D2-small domain, of ClpB protein G7042_06585 PF07724 AAA domain (Cdc48 subfamily) G7042_06585 PF06689 ClpX C4-type zinc finger G7042_06590 PF00004 ATPase family associated with various cellular activities (AAA) G7042_06590 PF02190 ATP-dependent protease La (LON) substrate-binding domain G7042_06590 PF05362 Lon protease (S16) C-terminal proteolytic domain G7042_06595 PF00216 Bacterial DNA-binding protein G7042_06600 PF13145 PPIC-type PPIASE domain G7042_06605 PF00005 ABC transporter G7042_06605 PF12848 ABC transporter G7042_06610 PF00474 Sodium:solute symporter family G7042_06615 PF04341 Protein of unknown function, DUF485 G7042_06630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain G7042_06630 PF00378 Enoyl-CoA hydratase/isomerase G7042_06630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain G7042_06635 PF01235 Sodium:alanine symporter family G7042_06640 PF00583 Acetyltransferase (GNAT) family G7042_06650 PF01184 GPR1/FUN34/yaaH family G7042_06665 PF00376 MerR family regulatory protein G7042_06665 PF09278 MerR, DNA binding G7042_06670 PF00682 HMGL-like G7042_06675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G7042_06675 PF02785 Biotin carboxylase C-terminal domain G7042_06675 PF00289 Biotin carboxylase, N-terminal domain G7042_06675 PF00364 Biotin-requiring enzyme G7042_06680 PF00378 Enoyl-CoA hydratase/isomerase G7042_06685 PF01039 Carboxyl transferase domain G7042_06705 PF00171 Aldehyde dehydrogenase family G7042_06710 PF02770 Acyl-CoA dehydrogenase, middle domain G7042_06710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain G7042_06710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain G7042_06715 PF00378 Enoyl-CoA hydratase/isomerase G7042_06720 PF00378 Enoyl-CoA hydratase/isomerase G7042_06725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase G7042_06725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase G7042_06735 PF13520 Amino acid permease G7042_06740 PF01925 Sulfite exporter TauE/SafE G7042_06760 PF13358 DDE superfamily endonuclease G7042_06760 PF13592 Winged helix-turn helix G7042_06770 PF13280 WYL domain G7042_06770 PF08279 HTH domain G7042_06780 PF01502 Phosphoribosyl-AMP cyclohydrolase G7042_06780 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase G7042_06785 PF00977 Histidine biosynthesis protein G7042_06790 PF00072 Response regulator receiver domain G7042_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_06790 PF00512 His Kinase A (phospho-acceptor) domain G7042_06790 PF01627 Hpt domain G7042_06795 PF08448 PAS fold G7042_06795 PF00990 Diguanylate cyclase, GGDEF domain G7042_06800 PF00072 Response regulator receiver domain G7042_06805 PF00977 Histidine biosynthesis protein G7042_06810 PF00117 Glutamine amidotransferase class-I G7042_06815 PF08645 Polynucleotide kinase 3 phosphatase G7042_06815 PF00475 Imidazoleglycerol-phosphate dehydratase G7042_06820 PF00155 Aminotransferase class I and II G7042_06825 PF00815 Histidinol dehydrogenase G7042_06830 PF08029 HisG, C-terminal domain G7042_06830 PF01634 ATP phosphoribosyltransferase G7042_06840 PF04851 Type III restriction enzyme, res subunit G7042_06840 PF13307 Helicase C-terminal domain G7042_06845 PF00814 Glycoprotease family G7042_06855 PF12697 Alpha/beta hydrolase family G7042_06860 PF00501 AMP-binding enzyme G7042_06860 PF13193 AMP-binding enzyme C-terminal domain G7042_06865 PF01612 3'-5' exonuclease G7042_06865 PF00570 HRDC domain G7042_06880 PF01207 Dihydrouridine synthase (Dus) G7042_06885 PF04304 Protein of unknown function (DUF454) G7042_06890 PF00156 Phosphoribosyl transferase domain G7042_06895 PF12170 DNA polymerase III tau subunit V interacting with alpha G7042_06895 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding G7042_06895 PF12169 DNA polymerase III subunits gamma and tau domain III G7042_06900 PF02575 YbaB/EbfC DNA-binding family G7042_06905 PF07670 Nucleoside recognition G7042_06910 PF00072 Response regulator receiver domain G7042_06910 PF00196 Bacterial regulatory proteins, luxR family G7042_06915 PF00571 CBS domain G7042_06915 PF01368 DHH family G7042_06915 PF02272 DHHA1 domain G7042_06915 PF01743 Poly A polymerase head domain G7042_06920 PF11898 Domain of unknown function (DUF3418) G7042_06920 PF00271 Helicase conserved C-terminal domain G7042_06920 PF04408 Helicase associated domain (HA2) G7042_06920 PF00270 DEAD/DEAH box helicase G7042_06920 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold G7042_06930 PF01386 Ribosomal L25p family G7042_06935 PF00753 Metallo-beta-lactamase superfamily G7042_06945 PF02769 AIR synthase related protein, C-terminal domain G7042_06945 PF00586 AIR synthase related protein, N-terminal domain G7042_06960 PF17785 PUA-like domain G7042_06960 PF10672 S-adenosylmethionine-dependent methyltransferase G7042_06965 PF00672 HAMP domain G7042_06965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_06965 PF12729 Four helix bundle sensory module for signal transduction G7042_06970 PF00708 Acylphosphatase G7042_06975 PF13417 Glutathione S-transferase, N-terminal domain G7042_06975 PF00043 Glutathione S-transferase, C-terminal domain G7042_06980 PF08264 Anticodon-binding domain of tRNA G7042_06980 PF01588 Putative tRNA binding domain G7042_06980 PF09334 tRNA synthetases class I (M) G7042_06985 PF10609 NUBPL iron-transfer P-loop NTPase G7042_06990 PF00485 Phosphoribulokinase / Uridine kinase family G7042_06995 PF00692 dUTPase G7042_07000 PF01384 Phosphate transporter family G7042_07005 PF12111 Polyribonucleotide phosphorylase C terminal G7042_07005 PF10150 Ribonuclease E/G family G7042_07005 PF00575 S1 RNA binding domain G7042_07010 PF00849 RNA pseudouridylate synthase G7042_07010 PF01479 S4 domain G7042_07015 PF13419 Haloacid dehalogenase-like hydrolase G7042_07020 PF02545 Maf-like protein G7042_07025 PF02620 Large ribosomal RNA subunit accumulation protein YceD G7042_07030 PF01783 Ribosomal L32p protein family G7042_07035 PF02504 Fatty acid synthesis protein G7042_07040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal G7042_07040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III G7042_07045 PF00698 Acyl transferase domain G7042_07055 PF00550 Phosphopantetheine attachment site G7042_07060 PF00109 Beta-ketoacyl synthase, N-terminal domain G7042_07060 PF02801 Beta-ketoacyl synthase, C-terminal domain G7042_07065 PF01063 Amino-transferase class IV G7042_07070 PF02618 YceG-like family G7042_07075 PF02223 Thymidylate kinase G7042_07080 PF09115 DNA polymerase III, delta subunit, C terminal G7042_07085 PF01026 TatD related DNase G7042_07090 PF00589 Phage integrase family G7042_07100 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF G7042_07100 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF G7042_07100 PF01189 16S rRNA methyltransferase RsmB/F G7042_07110 PF04403 Paraquat-inducible protein A G7042_07125 PF00285 Citrate synthase, C-terminal domain G7042_07130 PF03972 MmgE/PrpD family G7042_07145 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain G7042_07145 PF06974 Protein of unknown function (DUF1298) G7042_07170 PF00106 short chain dehydrogenase G7042_07200 PF01381 Helix-turn-helix G7042_07260 PF13808 DDE_Tnp_1-associated G7042_07260 PF01609 Transposase DDE domain G7042_07315 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer G7042_07325 PF06834 TraU protein G7042_07365 PF13728 F plasmid transfer operon protein G7042_07375 PF06122 Conjugative relaxosome accessory transposon protein G7042_07395 PF01848 Hok/gef family G7042_07405 PF10412 Type IV secretion-system coupling protein DNA-binding domain G7042_07405 PF12615 F sex factor protein N terminal G7042_07440 PF01464 Transglycosylase SLT domain G7042_07470 PF02195 ParB-like nuclease domain G7042_07470 PF17762 HTH domain found in ParB protein G7042_07475 PF04002 RadC-like JAB domain G7042_07525 PF00561 alpha/beta hydrolase fold G7042_07540 PF00239 Resolvase, N terminal domain G7042_07540 PF02796 Helix-turn-helix domain of resolvase G7042_07545 PF00593 TonB dependent receptor G7042_07545 PF07715 TonB-dependent Receptor Plug Domain G7042_07545 PF04886 PT repeat G7042_07555 PF00576 HIUase/Transthyretin family G7042_07570 PF05362 Lon protease (S16) C-terminal proteolytic domain G7042_07570 PF13654 AAA domain G7042_07575 PF07977 FabA-like domain G7042_07580 PF04957 Ribosome modulation factor G7042_07590 PF16326 ABC transporter C-terminal domain G7042_07590 PF00005 ABC transporter G7042_07590 PF12848 ABC transporter G7042_07600 PF01170 Putative RNA methylase family UPF0020 G7042_07600 PF02926 THUMP domain G7042_07600 PF10672 S-adenosylmethionine-dependent methyltransferase G7042_07610 PF07126 Cell-division protein ZapC G7042_07615 PF01180 Dihydroorotate dehydrogenase G7042_07625 PF01609 Transposase DDE domain G7042_07625 PF13808 DDE_Tnp_1-associated G7042_07640 PF11940 Domain of unknown function (DUF3458) Ig-like fold G7042_07640 PF17432 Domain of unknown function (DUF3458_C) ARM repeats G7042_07640 PF01433 Peptidase family M1 domain G7042_07645 PF03572 Peptidase family S41 G7042_07645 PF00595 PDZ domain G7042_07645 PF11818 C-terminal domain of tail specific protease (DUF3340) G7042_07645 PF17804 Tail specific protease N-terminal domain G7042_07650 PF04352 ProQ/FINO family G7042_07650 PF17516 ProQ C-terminal domain G7042_07655 PF13185 GAF domain G7042_07665 PF00115 Cytochrome C and Quinol oxidase polypeptide I G7042_07680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G7042_07680 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP G7042_07690 PF00403 Heavy-metal-associated domain G7042_07705 PF00027 Cyclic nucleotide-binding domain G7042_07705 PF13545 Crp-like helix-turn-helix domain G7042_07710 PF00582 Universal stress protein family G7042_07715 PF01171 PP-loop family G7042_07735 PF05025 RbsD / FucU transport protein family G7042_07745 PF02653 Branched-chain amino acid transport system / permease component G7042_07750 PF13407 Periplasmic binding protein domain G7042_07755 PF00294 pfkB family carbohydrate kinase G7042_07760 PF00356 Bacterial regulatory proteins, lacI family G7042_07785 PF02146 Sir2 family G7042_07800 PF09456 RcsC Alpha-Beta-Loop (ABL) G7042_07800 PF00512 His Kinase A (phospho-acceptor) domain G7042_07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_07800 PF00072 Response regulator receiver domain G7042_07805 PF00216 Bacterial DNA-binding protein G7042_07810 PF01588 Putative tRNA binding domain G7042_07810 PF03147 Ferredoxin-fold anticodon binding domain G7042_07810 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain G7042_07810 PF03483 B3/4 domain G7042_07810 PF03484 tRNA synthetase B5 domain G7042_07815 PF01409 tRNA synthetases class II core domain (F) G7042_07815 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain G7042_07820 PF00453 Ribosomal protein L20 G7042_07825 PF01632 Ribosomal protein L35 G7042_07830 PF00707 Translation initiation factor IF-3, C-terminal domain G7042_07830 PF05198 Translation initiation factor IF-3, N-terminal domain G7042_07835 PF02824 TGS domain G7042_07835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) G7042_07835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain G7042_07835 PF03129 Anticodon binding domain G7042_07845 PF04055 Radical SAM superfamily G7042_07855 PF03989 DNA gyrase C-terminal domain, beta-propeller G7042_07855 PF00521 DNA gyrase/topoisomerase IV, subunit A G7042_07865 PF13419 Haloacid dehalogenase-like hydrolase G7042_07870 PF02867 Ribonucleotide reductase, barrel domain G7042_07870 PF00317 Ribonucleotide reductase, all-alpha domain G7042_07870 PF03477 ATP cone domain G7042_07875 PF00268 Ribonucleotide reductase, small chain G7042_07880 PF00111 2Fe-2S iron-sulfur cluster binding domain G7042_07885 PF03562 MltA specific insert domain G7042_07885 PF06725 3D domain G7042_07890 PF06945 Protein of unknown function (DUF1289) G7042_07895 PF02378 Phosphotransferase system, EIIC G7042_07895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit G7042_07900 PF00294 pfkB family carbohydrate kinase G7042_07905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 G7042_07905 PF00381 PTS HPr component phosphorylation site G7042_07910 PF00356 Bacterial regulatory proteins, lacI family G7042_07910 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family G7042_07915 PF03222 Tryptophan/tyrosine permease family G7042_07930 PF00271 Helicase conserved C-terminal domain G7042_07930 PF00270 DEAD/DEAH box helicase G7042_07940 PF01264 Chorismate synthase G7042_07945 PF05175 Methyltransferase small domain G7042_07950 PF01713 Smr domain G7042_07955 PF00990 Diguanylate cyclase, GGDEF domain G7042_07955 PF08448 PAS fold G7042_07980 PF13358 DDE superfamily endonuclease G7042_07980 PF13592 Winged helix-turn helix G7042_08005 PF08274 PhnA Zinc-Ribbon G7042_08005 PF03831 PhnA domain G7042_08010 PF00378 Enoyl-CoA hydratase/isomerase G7042_08010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain G7042_08010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain G7042_08015 PF02803 Thiolase, C-terminal domain G7042_08015 PF00108 Thiolase, N-terminal domain G7042_08020 PF17863 AAA lid domain G7042_08020 PF07726 ATPase family associated with various cellular activities (AAA) G7042_08025 PF01882 Protein of unknown function DUF58 G7042_08035 PF13519 von Willebrand factor type A domain G7042_08035 PF17863 AAA lid domain G7042_08035 PF07728 AAA domain (dynein-related subfamily) G7042_08050 PF04545 Sigma-70, region 4 G7042_08050 PF04542 Sigma-70 region 2 G7042_08060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) G7042_08065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) G7042_08070 PF08668 HDOD domain G7042_08070 PF00563 EAL domain G7042_08075 PF00108 Thiolase, N-terminal domain G7042_08075 PF02803 Thiolase, C-terminal domain G7042_08080 PF09278 MerR, DNA binding G7042_08080 PF00376 MerR family regulatory protein G7042_08085 PF00375 Sodium:dicarboxylate symporter family G7042_08090 PF06865 Pyrimidine/purine nucleoside phosphorylase G7042_08095 PF03315 Serine dehydratase beta chain G7042_08095 PF03313 Serine dehydratase alpha chain G7042_08100 PF03313 Serine dehydratase alpha chain G7042_08100 PF03315 Serine dehydratase beta chain G7042_08105 PF13406 Transglycosylase SLT domain G7042_08110 PF05166 YcgL domain G7042_08115 PF03775 Septum formation inhibitor MinC, C-terminal domain G7042_08115 PF05209 Septum formation inhibitor MinC, N-terminal domain G7042_08120 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain G7042_08125 PF03776 Septum formation topological specificity factor MinE G7042_08130 PF04269 Protein of unknown function, DUF440 G7042_08135 PF00912 Transglycosylase G7042_08145 PF04269 Protein of unknown function, DUF440 G7042_08155 PF17783 CvfB-like winged helix domain G7042_08155 PF13509 S1 domain G7042_08180 PF02525 Flavodoxin-like fold G7042_08185 PF00892 EamA-like transporter family G7042_08190 PF02222 ATP-grasp domain G7042_08195 PF13419 Haloacid dehalogenase-like hydrolase G7042_08205 PF00677 Lumazine binding domain G7042_08210 PF06786 Uncharacterised protein family (UPF0253) G7042_08215 PF01554 MatE G7042_08250 PF00136 DNA polymerase family B G7042_08250 PF03104 DNA polymerase family B, exonuclease domain G7042_08280 PF03279 Bacterial lipid A biosynthesis acyltransferase G7042_08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_08290 PF03466 LysR substrate binding domain G7042_08295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain G7042_08295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold G7042_08300 PF01261 Xylose isomerase-like TIM barrel G7042_08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_08305 PF03466 LysR substrate binding domain G7042_08315 PF00232 Glycosyl hydrolase family 1 G7042_08320 PF03466 LysR substrate binding domain G7042_08320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_08325 PF13592 Winged helix-turn helix G7042_08325 PF13358 DDE superfamily endonuclease G7042_08350 PF05433 Glycine zipper 2TM domain G7042_08370 PF01032 FecCD transport family G7042_08375 PF00005 ABC transporter G7042_08380 PF07690 Major Facilitator Superfamily G7042_08390 PF07152 YaeQ protein G7042_08425 PF01327 Polypeptide deformylase G7042_08450 PF03330 Lytic transglycolase G7042_08450 PF05036 Sporulation related domain G7042_08455 PF04310 MukB N-terminal G7042_08455 PF16330 MukB hinge domain G7042_08460 PF04288 MukE-like family G7042_08465 PF17192 MukF middle domain G7042_08465 PF03882 MukF winged-helix domain G7042_08465 PF17193 MukF C-terminal domain G7042_08470 PF13847 Methyltransferase domain G7042_08480 PF02698 DUF218 domain G7042_08485 PF00121 Triosephosphate isomerase G7042_08490 PF00365 Phosphofructokinase G7042_08530 PF13419 Haloacid dehalogenase-like hydrolase G7042_08575 PF00128 Alpha amylase, catalytic domain G7042_08575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) G7042_08585 PF11398 Protein of unknown function (DUF2813) G7042_08590 PF14525 AraC-binding-like domain G7042_08590 PF12833 Helix-turn-helix domain G7042_08600 PF03466 LysR substrate binding domain G7042_08600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_08605 PF01925 Sulfite exporter TauE/SafE G7042_08610 PF03942 DTW domain G7042_08620 PF07478 D-ala D-ala ligase C-terminus G7042_08620 PF01820 D-ala D-ala ligase N-terminus G7042_08630 PF00255 Glutathione peroxidase G7042_08635 PF00271 Helicase conserved C-terminal domain G7042_08635 PF00270 DEAD/DEAH box helicase G7042_08640 PF13673 Acetyltransferase (GNAT) domain G7042_08650 PF02694 Uncharacterised BCR, YnfA/UPF0060 family G7042_08665 PF01928 CYTH domain G7042_08685 PF00465 Iron-containing alcohol dehydrogenase G7042_08690 PF03992 Antibiotic biosynthesis monooxygenase G7042_08695 PF08543 Phosphomethylpyrimidine kinase G7042_08715 PF00561 alpha/beta hydrolase fold G7042_08715 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus G7042_08720 PF01575 MaoC like domain G7042_08735 PF00664 ABC transporter transmembrane region G7042_08735 PF00005 ABC transporter G7042_08745 PF00072 Response regulator receiver domain G7042_08745 PF00672 HAMP domain G7042_08745 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G7042_08745 PF00512 His Kinase A (phospho-acceptor) domain G7042_08745 PF01627 Hpt domain G7042_08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_08750 PF00085 Thioredoxin G7042_08755 PF00939 Sodium:sulfate symporter transmembrane region G7042_08760 PF00343 Carbohydrate phosphorylase G7042_08805 PF01609 Transposase DDE domain G7042_08805 PF13808 DDE_Tnp_1-associated G7042_08830 PF00425 chorismate binding enzyme G7042_08830 PF04715 Anthranilate synthase component I, N terminal region G7042_08835 PF00293 NUDIX domain G7042_08840 PF03222 Tryptophan/tyrosine permease family G7042_08845 PF00375 Sodium:dicarboxylate symporter family G7042_08850 PF00270 DEAD/DEAH box helicase G7042_08850 PF16124 RecQ zinc-binding G7042_08850 PF00271 Helicase conserved C-terminal domain G7042_08850 PF00570 HRDC domain G7042_08850 PF09382 RQC domain G7042_08855 PF08298 PrkA AAA domain G7042_08855 PF06798 PrkA serine protein kinase C-terminal domain G7042_08860 PF04285 Protein of unknown function (DUF444) G7042_08865 PF04293 SpoVR like protein G7042_08870 PF07840 FadR C-terminal domain G7042_08870 PF00392 Bacterial regulatory proteins, gntR family G7042_08875 PF06450 Bacterial Na+/H+ antiporter B (NhaB) G7042_08880 PF02600 Disulfide bond formation protein DsbB G7042_08885 PF09335 SNARE associated Golgi protein G7042_08895 PF17757 UvrB interaction domain G7042_08895 PF12344 Ultra-violet resistance protein B G7042_08895 PF00271 Helicase conserved C-terminal domain G7042_08895 PF04851 Type III restriction enzyme, res subunit G7042_08895 PF02151 UvrB/uvrC motif G7042_08905 PF06826 Predicted Permease Membrane Region G7042_08905 PF02080 TrkA-C domain G7042_08910 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_08910 PF01464 Transglycosylase SLT domain G7042_08915 PF13808 DDE_Tnp_1-associated G7042_08915 PF01609 Transposase DDE domain G7042_08945 PF08279 HTH domain G7042_08945 PF12431 Transcriptional regulator G7042_08945 PF00072 Response regulator receiver domain G7042_08950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_08950 PF00989 PAS fold G7042_08950 PF17203 Single cache domain 3 G7042_08950 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain G7042_08955 PF00480 ROK family G7042_08955 PF01047 MarR family G7042_08960 PF00672 HAMP domain G7042_08960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_08960 PF17200 Single Cache domain 2 G7042_08965 PF02810 SEC-C motif G7042_08970 PF04324 BFD-like [2Fe-2S] binding domain G7042_08970 PF01266 FAD dependent oxidoreductase G7042_08975 PF00890 FAD binding domain G7042_08980 PF13183 4Fe-4S dicluster domain G7042_08980 PF02754 Cysteine-rich domain G7042_08985 PF02335 Cytochrome c552 G7042_08990 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) G7042_08990 PF13435 Cytochrome c554 and c-prime G7042_08995 PF00037 4Fe-4S binding domain G7042_08995 PF13247 4Fe-4S dicluster domain G7042_09000 PF03916 Polysulphide reductase, NrfD G7042_09005 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal G7042_09005 PF01578 Cytochrome C assembly protein G7042_09010 PF08534 Redoxin G7042_09015 PF03918 Cytochrome C biogenesis protein G7042_09025 PF00768 D-alanyl-D-alanine carboxypeptidase G7042_09030 PF01212 Beta-eliminating lyase G7042_09040 PF04244 Deoxyribodipyrimidine photo-lyase-related protein G7042_09055 PF07969 Amidohydrolase family G7042_09070 PF08267 Cobalamin-independent synthase, N-terminal domain G7042_09070 PF01717 Cobalamin-independent synthase, Catalytic domain G7042_09075 PF03466 LysR substrate binding domain G7042_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_09085 PF07715 TonB-dependent Receptor Plug Domain G7042_09085 PF00593 TonB dependent receptor G7042_09090 PF06445 GyrI-like small molecule binding domain G7042_09090 PF12833 Helix-turn-helix domain G7042_09095 PF00106 short chain dehydrogenase G7042_09100 PF03466 LysR substrate binding domain G7042_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_09105 PF13460 NAD(P)H-binding G7042_09115 PF01053 Cys/Met metabolism PLP-dependent enzyme G7042_09125 PF02774 Semialdehyde dehydrogenase, dimerisation domain G7042_09125 PF01118 Semialdehyde dehydrogenase, NAD binding domain G7042_09130 PF18381 YcaO cyclodehydratase C-terminal domain G7042_09130 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding G7042_09135 PF01226 Formate/nitrite transporter G7042_09140 PF02901 Pyruvate formate lyase-like G7042_09140 PF01228 Glycine radical G7042_09145 PF03692 Putative zinc- or iron-chelating domain G7042_09150 PF02629 CoA binding domain G7042_09150 PF00549 CoA-ligase G7042_09155 PF08442 ATP-grasp domain G7042_09155 PF00549 CoA-ligase G7042_09160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) G7042_09160 PF00364 Biotin-requiring enzyme G7042_09160 PF02817 e3 binding domain G7042_09165 PF16870 2-oxoglutarate dehydrogenase C-terminal G7042_09165 PF16078 2-oxoglutarate dehydrogenase N-terminus G7042_09165 PF00676 Dehydrogenase E1 component G7042_09165 PF02779 Transketolase, pyrimidine binding domain G7042_09170 PF13085 2Fe-2S iron-sulfur cluster binding domain G7042_09175 PF00890 FAD binding domain G7042_09175 PF02910 Fumarate reductase flavoprotein C-term G7042_09180 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit G7042_09185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit G7042_09190 PF00285 Citrate synthase, C-terminal domain G7042_09205 PF00109 Beta-ketoacyl synthase, N-terminal domain G7042_09205 PF02801 Beta-ketoacyl synthase, C-terminal domain G7042_09210 PF05430 S-adenosyl-L-methionine-dependent methyltransferase G7042_09210 PF01266 FAD dependent oxidoreductase G7042_09220 PF03606 C4-dicarboxylate anaerobic carrier G7042_09235 PF01863 Protein of unknown function DUF45 G7042_09250 PF01197 Ribosomal protein L31 G7042_09255 PF00444 Ribosomal protein L36 G7042_09260 PF00224 Pyruvate kinase, barrel domain G7042_09260 PF02887 Pyruvate kinase, alpha/beta domain G7042_09275 PF07745 Glycosyl hydrolase family 53 G7042_09280 PF00528 Binding-protein-dependent transport system inner membrane component G7042_09310 PF17912 MalK OB fold domain G7042_09310 PF00005 ABC transporter G7042_09320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_09320 PF00672 HAMP domain G7042_09330 PF07745 Glycosyl hydrolase family 53 G7042_09335 PF07745 Glycosyl hydrolase family 53 G7042_09340 PF02264 LamB porin G7042_09345 PF00356 Bacterial regulatory proteins, lacI family G7042_09350 PF16363 GDP-mannose 4,6 dehydratase G7042_09370 PF08544 GHMP kinases C terminal G7042_09370 PF10509 Galactokinase galactose-binding signature G7042_09370 PF00288 GHMP kinases N terminal domain G7042_09375 PF02311 AraC-like ligand binding domain G7042_09375 PF12833 Helix-turn-helix domain G7042_09380 PF02653 Branched-chain amino acid transport system / permease component G7042_09385 PF00005 ABC transporter G7042_09390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family G7042_09395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain G7042_09400 PF00596 Class II Aldolase and Adducin N-terminal domain G7042_09405 PF11762 L-arabinose isomerase C-terminal domain G7042_09405 PF02610 L-arabinose isomerase G7042_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_09410 PF03466 LysR substrate binding domain G7042_09415 PF00155 Aminotransferase class I and II G7042_09420 PF00795 Carbon-nitrogen hydrolase G7042_09425 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_09435 PF00929 Exonuclease G7042_09435 PF08411 Exonuclease C-terminal G7042_09455 PF03788 LrgA family G7042_09460 PF04172 LrgB-like family G7042_09465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region G7042_09465 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region G7042_09470 PF00501 AMP-binding enzyme G7042_09475 PF08891 YfcL protein G7042_09485 PF03741 Integral membrane protein TerC family G7042_09490 PF00691 OmpA family G7042_09495 PF00990 Diguanylate cyclase, GGDEF domain G7042_09495 PF17152 Periplasmic sensor domain G7042_09500 PF13689 YfiR/HmsC-like G7042_09505 PF18024 Helix-turn-helix domain G7042_09505 PF00158 Sigma-54 interaction domain G7042_09510 PF01329 Pterin 4 alpha carbinolamine dehydratase G7042_09515 PF00351 Biopterin-dependent aromatic amino acid hydroxylase G7042_09520 PF05128 Domain of unknown function (DUF697) G7042_09525 PF04317 YcjX-like family, DUF463 G7042_09535 PF06667 Phage shock protein B G7042_09540 PF04012 PspA/IM30 family G7042_09545 PF02954 Bacterial regulatory protein, Fis family G7042_09545 PF00158 Sigma-54 interaction domain G7042_09550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_09555 PF00528 Binding-protein-dependent transport system inner membrane component G7042_09560 PF12911 N-terminal TM domain of oligopeptide transport permease C G7042_09560 PF00528 Binding-protein-dependent transport system inner membrane component G7042_09565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_09565 PF00005 ABC transporter G7042_09570 PF00005 ABC transporter G7042_09575 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) G7042_09580 PF00156 Phosphoribosyl transferase domain G7042_09585 PF02674 Colicin V production protein G7042_09590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) G7042_09590 PF02403 Seryl-tRNA synthetase N-terminal domain G7042_09595 PF00004 ATPase family associated with various cellular activities (AAA) G7042_09595 PF12002 MgsA AAA+ ATPase C terminal G7042_09595 PF16193 AAA C-terminal domain G7042_09600 PF03548 Outer membrane lipoprotein carrier protein LolA G7042_09605 PF01580 FtsK/SpoIIIE family G7042_09605 PF09397 Ftsk gamma domain G7042_09605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE G7042_09605 PF17854 FtsK alpha domain G7042_09610 PF01037 Lrp/AsnC ligand binding domain G7042_09625 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_09635 PF05433 Glycine zipper 2TM domain G7042_09640 PF03588 Leucyl/phenylalanyl-tRNA protein transferase G7042_09645 PF04377 Arginine-tRNA-protein transferase, C terminus G7042_09645 PF04376 Arginine-tRNA-protein transferase, N terminus G7042_09650 PF01176 Translation initiation factor 1A / IF-1 G7042_09655 PF17871 AAA lid domain G7042_09655 PF00004 ATPase family associated with various cellular activities (AAA) G7042_09655 PF10431 C-terminal, D2-small domain, of ClpB protein G7042_09655 PF07724 AAA domain (Cdc48 subfamily) G7042_09655 PF02861 Clp amino terminal domain, pathogenicity island component G7042_09660 PF02617 ATP-dependent Clp protease adaptor protein ClpS G7042_09665 PF00313 'Cold-shock' DNA-binding domain G7042_09670 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain G7042_09670 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain G7042_09730 PF00158 Sigma-54 interaction domain G7042_09730 PF02954 Bacterial regulatory protein, Fis family G7042_09755 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE G7042_09775 PF05947 Type VI secretion system, TssF G7042_09800 PF01740 STAS domain G7042_09800 PF00916 Sulfate permease family G7042_09850 PF00892 EamA-like transporter family G7042_09855 PF02508 Rnf-Nqr subunit, membrane protein G7042_09860 PF04060 Putative Fe-S cluster G7042_09865 PF10531 SLBB domain G7042_09865 PF13375 RnfC Barrel sandwich hybrid domain G7042_09865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit G7042_09865 PF12838 4Fe-4S dicluster domain G7042_09870 PF03116 NQR2, RnfD, RnfE family G7042_09875 PF04205 FMN-binding domain G7042_09880 PF02508 Rnf-Nqr subunit, membrane protein G7042_09885 PF00633 Helix-hairpin-helix motif G7042_09885 PF00730 HhH-GPD superfamily base excision DNA repair protein G7042_09885 PF10576 Iron-sulfur binding domain of endonuclease III G7042_09890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G7042_09895 PF00691 OmpA family G7042_09895 PF18393 MotY N-terminal domain G7042_09900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_09900 PF00672 HAMP domain G7042_09900 PF12729 Four helix bundle sensory module for signal transduction G7042_09905 PF00929 Exonuclease G7042_09910 PF13726 Na+-H+ antiporter family G7042_09910 PF03553 Na+/H+ antiporter family G7042_09915 PF00990 Diguanylate cyclase, GGDEF domain G7042_09915 PF03707 Bacterial signalling protein N terminal repeat G7042_09915 PF00563 EAL domain G7042_09915 PF13188 PAS domain G7042_09925 PF03880 DbpA RNA binding domain G7042_09925 PF00271 Helicase conserved C-terminal domain G7042_09925 PF00270 DEAD/DEAH box helicase G7042_09930 PF03061 Thioesterase superfamily G7042_09940 PF13183 4Fe-4S dicluster domain G7042_09940 PF02913 FAD linked oxidases, C-terminal domain G7042_09940 PF01565 FAD binding domain G7042_09950 PF03741 Integral membrane protein TerC family G7042_09950 PF03471 Transporter associated domain G7042_09955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family G7042_09965 PF13344 Haloacid dehalogenase-like hydrolase G7042_09970 PF02254 TrkA-N domain G7042_09970 PF00999 Sodium/hydrogen exchanger family G7042_09980 PF00733 Asparagine synthase G7042_09980 PF13537 Glutamine amidotransferase domain G7042_09985 PF03577 Peptidase family C69 G7042_10005 PF13417 Glutathione S-transferase, N-terminal domain G7042_10005 PF00043 Glutathione S-transferase, C-terminal domain G7042_10010 PF14497 Glutathione S-transferase, C-terminal domain G7042_10010 PF02798 Glutathione S-transferase, N-terminal domain G7042_10025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G7042_10035 PF00849 RNA pseudouridylate synthase G7042_10055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_10055 PF08447 PAS fold G7042_10065 PF01027 Inhibitor of apoptosis-promoting Bax1 G7042_10070 PF12805 FUSC-like inner membrane protein yccS G7042_10075 PF04358 DsrC like protein G7042_10080 PF05036 Sporulation related domain G7042_10085 PF02875 Mur ligase family, glutamate ligase domain G7042_10085 PF08245 Mur ligase middle domain G7042_10090 PF01039 Carboxyl transferase domain G7042_10090 PF17848 Acetyl-coA carboxylase zinc finger domain G7042_10095 PF01416 tRNA pseudouridine synthase G7042_10105 PF02774 Semialdehyde dehydrogenase, dimerisation domain G7042_10105 PF01118 Semialdehyde dehydrogenase, NAD binding domain G7042_10110 PF11890 Domain of unknown function (DUF3410) G7042_10110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G7042_10110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain G7042_10115 PF01569 PAP2 superfamily G7042_10120 PF03180 NLPA lipoprotein G7042_10135 PF01609 Transposase DDE domain G7042_10135 PF13808 DDE_Tnp_1-associated G7042_10150 PF00082 Subtilase family G7042_10150 PF01483 Proprotein convertase P-domain G7042_10160 PF14310 Fibronectin type III-like domain G7042_10160 PF01915 Glycosyl hydrolase family 3 C-terminal domain G7042_10160 PF00933 Glycosyl hydrolase family 3 N terminal domain G7042_10170 PF00391 PEP-utilising enzyme, mobile domain G7042_10170 PF02896 PEP-utilising enzyme, TIM barrel domain G7042_10170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain G7042_10195 PF00324 Amino acid permease G7042_10235 PF03239 Iron permease FTR1 family G7042_10240 PF01593 Flavin containing amine oxidoreductase G7042_10260 PF07690 Major Facilitator Superfamily G7042_10275 PF00005 ABC transporter G7042_10280 PF02687 FtsX-like permease family G7042_10280 PF12704 MacB-like periplasmic core domain G7042_10295 PF02308 MgtC family G7042_10350 PF01625 Peptide methionine sulfoxide reductase G7042_10355 PF00583 Acetyltransferase (GNAT) family G7042_10355 PF00696 Amino acid kinase family G7042_10360 PF01842 ACT domain G7042_10360 PF00696 Amino acid kinase family G7042_10370 PF00884 Sulfatase G7042_10375 PF02016 LD-carboxypeptidase N-terminal domain G7042_10375 PF17676 LD-carboxypeptidase C-terminal domain G7042_10385 PF01906 Putative heavy-metal-binding G7042_10390 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_10425 PF09278 MerR, DNA binding G7042_10425 PF00376 MerR family regulatory protein G7042_10440 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_10440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster G7042_10445 PF01645 Conserved region in glutamate synthase G7042_10445 PF00310 Glutamine amidotransferases class-II G7042_10445 PF04898 Glutamate synthase central domain G7042_10445 PF01493 GXGXG motif G7042_10450 PF13808 DDE_Tnp_1-associated G7042_10450 PF01609 Transposase DDE domain G7042_10500 PF00271 Helicase conserved C-terminal domain G7042_10500 PF00270 DEAD/DEAH box helicase G7042_10505 PF13302 Acetyltransferase (GNAT) domain G7042_10520 PF08378 Nuclease-related domain G7042_10530 PF07759 Protein of unknown function (DUF1615) G7042_10535 PF00682 HMGL-like G7042_10535 PF08502 LeuA allosteric (dimerisation) domain G7042_10540 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain G7042_10540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain G7042_10540 PF02142 MGS-like domain G7042_10545 PF00117 Glutamine amidotransferase class-I G7042_10545 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain G7042_10550 PF05173 Dihydrodipicolinate reductase, C-terminus G7042_10550 PF01113 Dihydrodipicolinate reductase, N-terminus G7042_10565 PF01812 5-formyltetrahydrofolate cyclo-ligase family G7042_10570 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) G7042_10575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain G7042_10575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G7042_10575 PF01842 ACT domain G7042_10580 PF01219 Prokaryotic diacylglycerol kinase G7042_10585 PF00793 DAHP synthetase I family G7042_10590 PF00005 ABC transporter G7042_10595 PF01032 FecCD transport family G7042_10600 PF00512 His Kinase A (phospho-acceptor) domain G7042_10600 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_10600 PF00072 Response regulator receiver domain G7042_10600 PF01627 Hpt domain G7042_10600 PF00989 PAS fold G7042_10610 PF00437 Type II/IV secretion system protein G7042_10615 PF00483 Nucleotidyl transferase G7042_10630 PF02421 Ferrous iron transport protein B G7042_10630 PF07670 Nucleoside recognition G7042_10630 PF07664 Ferrous iron transport protein B C terminus G7042_10640 PF01253 Translation initiation factor SUI1 G7042_10645 PF01169 Uncharacterized protein family UPF0016 G7042_10675 PF13185 GAF domain G7042_10675 PF00990 Diguanylate cyclase, GGDEF domain G7042_10690 PF13358 DDE superfamily endonuclease G7042_10690 PF13592 Winged helix-turn helix G7042_10695 PF09190 DALR domain G7042_10695 PF01406 tRNA synthetases class I (C) catalytic domain G7042_10700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD G7042_10710 PF00149 Calcineurin-like phosphoesterase G7042_10715 PF04226 Transglycosylase associated protein G7042_10730 PF03466 LysR substrate binding domain G7042_10730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_10750 PF01066 CDP-alcohol phosphatidyltransferase G7042_10755 PF01541 GIY-YIG catalytic domain G7042_10755 PF08459 UvrC Helix-hairpin-helix N-terminal G7042_10755 PF02151 UvrB/uvrC motif G7042_10760 PF00072 Response regulator receiver domain G7042_10760 PF00196 Bacterial regulatory proteins, luxR family G7042_10765 PF02348 Cytidylyltransferase G7042_10770 PF03966 Trm112p-like protein G7042_10775 PF02606 Tetraacyldisaccharide-1-P 4'-kinase G7042_10780 PF00005 ABC transporter G7042_10780 PF00664 ABC transporter transmembrane region G7042_10785 PF03772 Competence protein G7042_10785 PF00753 Metallo-beta-lactamase superfamily G7042_10800 PF05872 Bacterial protein of unknown function (DUF853) G7042_10805 PF00155 Aminotransferase class I and II G7042_10815 PF13609 Gram-negative porin G7042_10820 PF06733 DEAD_2 G7042_10820 PF13307 Helicase C-terminal domain G7042_10835 PF01926 50S ribosome-binding GTPase G7042_10840 PF00245 Alkaline phosphatase G7042_10845 PF00245 Alkaline phosphatase G7042_10860 PF01272 Transcription elongation factor, GreA/GreB, C-term G7042_10860 PF14760 Rnk N-terminus G7042_10865 PF00072 Response regulator receiver domain G7042_10865 PF00196 Bacterial regulatory proteins, luxR family G7042_10870 PF07730 Histidine kinase G7042_10870 PF05231 MASE1 G7042_10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_10875 PF07690 Major Facilitator Superfamily G7042_10880 PF08448 PAS fold G7042_10880 PF00990 Diguanylate cyclase, GGDEF domain G7042_10885 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_10890 PF00528 Binding-protein-dependent transport system inner membrane component G7042_10895 PF00005 ABC transporter G7042_10900 PF04116 Fatty acid hydroxylase superfamily G7042_10905 PF13520 Amino acid permease G7042_10920 PF03471 Transporter associated domain G7042_10920 PF00571 CBS domain G7042_10920 PF01595 Cyclin M transmembrane N-terminal domain G7042_10925 PF01895 PhoU domain G7042_10930 PF00005 ABC transporter G7042_10935 PF00528 Binding-protein-dependent transport system inner membrane component G7042_10940 PF00528 Binding-protein-dependent transport system inner membrane component G7042_10945 PF14437 MafB19-like deaminase G7042_10955 PF01274 Malate synthase G7042_10960 PF00463 Isocitrate lyase family G7042_10965 PF00308 Bacterial dnaA protein G7042_10980 PF00586 AIR synthase related protein, N-terminal domain G7042_10980 PF02769 AIR synthase related protein, C-terminal domain G7042_10985 PF00551 Formyl transferase G7042_10990 PF01784 NIF3 (NGG1p interacting factor 3) G7042_10995 PF00072 Response regulator receiver domain G7042_10995 PF02954 Bacterial regulatory protein, Fis family G7042_10995 PF00158 Sigma-54 interaction domain G7042_11000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_11000 PF13188 PAS domain G7042_11000 PF00512 His Kinase A (phospho-acceptor) domain G7042_11020 PF13089 Polyphosphate kinase N-terminal domain G7042_11020 PF13090 Polyphosphate kinase C-terminal domain 2 G7042_11020 PF17941 Polyphosphate kinase C-terminal domain 1 G7042_11020 PF02503 Polyphosphate kinase middle domain G7042_11025 PF02541 Ppx/GppA phosphatase family G7042_11030 PF01769 Divalent cation transporter G7042_11030 PF00571 CBS domain G7042_11030 PF03448 MgtE intracellular N domain G7042_11055 PF10135 Rod binding protein G7042_11055 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase G7042_11065 PF02107 Flagellar L-ring protein G7042_11070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_11070 PF00460 Flagella basal body rod protein G7042_11075 PF00460 Flagella basal body rod protein G7042_11075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_11080 PF07559 Flagellar basal body protein FlaE G7042_11080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_11080 PF00460 Flagella basal body rod protein G7042_11090 PF00460 Flagella basal body rod protein G7042_11090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_11095 PF00460 Flagella basal body rod protein G7042_11100 PF01739 CheR methyltransferase, SAM binding domain G7042_11100 PF03705 CheR methyltransferase, all-alpha domain G7042_11105 PF00072 Response regulator receiver domain G7042_11105 PF01584 CheW-like domain G7042_11125 PF12850 Calcineurin-like phosphoesterase superfamily domain G7042_11130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_11140 PF01479 S4 domain G7042_11140 PF00849 RNA pseudouridylate synthase G7042_11145 PF11871 Domain of unknown function (DUF3391) G7042_11145 PF01966 HD domain G7042_11155 PF00892 EamA-like transporter family G7042_11195 PF00313 'Cold-shock' DNA-binding domain G7042_11220 PF02779 Transketolase, pyrimidine binding domain G7042_11220 PF02780 Transketolase, C-terminal domain G7042_11225 PF00676 Dehydrogenase E1 component G7042_11230 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family G7042_11240 PF05472 DNA replication terminus site-binding protein (Ter protein) G7042_11245 PF00271 Helicase conserved C-terminal domain G7042_11245 PF04434 SWIM zinc finger G7042_11245 PF00176 SNF2 family N-terminal domain G7042_11250 PF04337 Protein of unknown function, DUF480 G7042_11265 PF13808 DDE_Tnp_1-associated G7042_11265 PF01609 Transposase DDE domain G7042_11285 PF02719 Polysaccharide biosynthesis protein G7042_11290 PF00953 Glycosyl transferase family 4 G7042_11295 PF01370 NAD dependent epimerase/dehydratase family G7042_11305 PF01609 Transposase DDE domain G7042_11305 PF13808 DDE_Tnp_1-associated G7042_11315 PF02080 TrkA-C domain G7042_11315 PF03600 Citrate transporter G7042_11320 PF01609 Transposase DDE domain G7042_11320 PF13808 DDE_Tnp_1-associated G7042_11340 PF02350 UDP-N-acetylglucosamine 2-epimerase G7042_11355 PF00005 ABC transporter G7042_11365 PF00263 Bacterial type II and III secretion system protein G7042_11365 PF03958 Bacterial type II/III secretion system short domain G7042_11405 PF08334 Type II secretion system (T2SS), protein G G7042_11405 PF07963 Prokaryotic N-terminal methylation motif G7042_11410 PF00482 Type II secretion system (T2SS), protein F G7042_11415 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain G7042_11415 PF00437 Type II/IV secretion system protein G7042_11425 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase G7042_11430 PF00483 Nucleotidyl transferase G7042_11435 PF04321 RmlD substrate binding domain G7042_11440 PF16363 GDP-mannose 4,6 dehydratase G7042_11445 PF02321 Outer membrane efflux protein G7042_11460 PF00440 Bacterial regulatory proteins, tetR family G7042_11460 PF08361 MAATS-type transcriptional repressor, C-terminal region G7042_11480 PF00849 RNA pseudouridylate synthase G7042_11480 PF01479 S4 domain G7042_11485 PF04079 Segregation and condensation complex subunit ScpB G7042_11490 PF02616 Segregation and condensation protein ScpA G7042_11495 PF01300 Telomere recombination G7042_11500 PF02811 PHP domain G7042_11510 PF00425 chorismate binding enzyme G7042_11510 PF04715 Anthranilate synthase component I, N terminal region G7042_11515 PF00117 Glutamine amidotransferase class-I G7042_11515 PF02885 Glycosyl transferase family, helical bundle domain G7042_11515 PF00591 Glycosyl transferase family, a/b domain G7042_11520 PF00591 Glycosyl transferase family, a/b domain G7042_11520 PF02885 Glycosyl transferase family, helical bundle domain G7042_11525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase G7042_11525 PF00218 Indole-3-glycerol phosphate synthase G7042_11530 PF00291 Pyridoxal-phosphate dependent enzyme G7042_11535 PF00290 Tryptophan synthase alpha chain G7042_11585 PF02378 Phosphotransferase system, EIIC G7042_11585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit G7042_11585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 G7042_11595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit G7042_11605 PF00849 RNA pseudouridylate synthase G7042_11610 PF00293 NUDIX domain G7042_11620 PF04356 Protein of unknown function (DUF489) G7042_11625 PF00206 Lyase G7042_11625 PF08328 Adenylosuccinate lyase C-terminal G7042_11630 PF08007 Cupin superfamily protein G7042_11660 PF13417 Glutathione S-transferase, N-terminal domain G7042_11665 PF01243 Pyridoxamine 5'-phosphate oxidase G7042_11665 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region G7042_11680 PF01189 16S rRNA methyltransferase RsmB/F G7042_11680 PF01029 NusB family G7042_11685 PF00462 Glutaredoxin G7042_11690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain G7042_11690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain G7042_11695 PF04333 MlaA lipoprotein G7042_11705 PF03918 Cytochrome C biogenesis protein G7042_11710 PF08534 Redoxin G7042_11715 PF01578 Cytochrome C assembly protein G7042_11715 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal G7042_11720 PF03100 CcmE G7042_11725 PF04995 Heme exporter protein D (CcmD) G7042_11730 PF01578 Cytochrome C assembly protein G7042_11735 PF03379 CcmB protein G7042_11740 PF00005 ABC transporter G7042_11755 PF01584 CheW-like domain G7042_11765 PF13614 AAA domain G7042_11770 PF13677 Membrane MotB of proton-channel complex MotA/MotB G7042_11770 PF00691 OmpA family G7042_11775 PF01618 MotA/TolQ/ExbB proton channel family G7042_11780 PF01339 CheB methylesterase G7042_11780 PF00072 Response regulator receiver domain G7042_11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_11785 PF01627 Hpt domain G7042_11785 PF01584 CheW-like domain G7042_11785 PF00072 Response regulator receiver domain G7042_11785 PF02895 Signal transducing histidine kinase, homodimeric domain G7042_11790 PF13592 Winged helix-turn helix G7042_11790 PF13358 DDE superfamily endonuclease G7042_11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_11795 PF03466 LysR substrate binding domain G7042_11800 PF12563 Hemolytic toxin N terminal G7042_11800 PF07968 Leukocidin/Hemolysin toxin family G7042_11805 PF00877 NlpC/P60 family G7042_11815 PF00171 Aldehyde dehydrogenase family G7042_11820 PF17932 Tetracyclin repressor-like, C-terminal domain G7042_11820 PF00440 Bacterial regulatory proteins, tetR family G7042_11830 PF00465 Iron-containing alcohol dehydrogenase G7042_11840 PF00291 Pyridoxal-phosphate dependent enzyme G7042_11855 PF01740 STAS domain G7042_11855 PF00916 Sulfate permease family G7042_11860 PF01554 MatE G7042_11870 PF04325 Protein of unknown function (DUF465) G7042_11875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G7042_11875 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg G7042_11875 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase G7042_11875 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II G7042_11875 PF10371 Domain of unknown function G7042_11880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster G7042_11880 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_11880 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region G7042_11890 PF00111 2Fe-2S iron-sulfur cluster binding domain G7042_11890 PF03473 MOSC domain G7042_11890 PF00111 2Fe-2S iron-sulfur cluster binding domain G7042_11890 PF03473 MOSC domain G7042_11890 PF03476 MOSC N-terminal beta barrel domain G7042_11890 PF03476 MOSC N-terminal beta barrel domain G7042_11895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_11895 PF13426 PAS domain G7042_11895 PF08447 PAS fold G7042_11900 PF01435 Peptidase family M48 G7042_11910 PF12697 Alpha/beta hydrolase family G7042_11910 PF08241 Methyltransferase domain G7042_11915 PF00155 Aminotransferase class I and II G7042_11920 PF06968 Biotin and Thiamin Synthesis associated domain G7042_11920 PF04055 Radical SAM superfamily G7042_11925 PF00202 Aminotransferase class-III G7042_11940 PF01336 OB-fold nucleic acid binding domain G7042_11940 PF00152 tRNA synthetases class II (D, K and N) G7042_11960 PF03466 LysR substrate binding domain G7042_11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_11965 PF03960 ArsC family G7042_11970 PF07687 Peptidase dimerisation domain G7042_11970 PF01546 Peptidase family M20/M25/M40 G7042_11975 PF02557 D-alanyl-D-alanine carboxypeptidase G7042_11985 PF03471 Transporter associated domain G7042_11985 PF00999 Sodium/hydrogen exchanger family G7042_11985 PF02080 TrkA-C domain G7042_11995 PF00999 Sodium/hydrogen exchanger family G7042_11995 PF02080 TrkA-C domain G7042_11995 PF03471 Transporter associated domain G7042_12005 PF01609 Transposase DDE domain G7042_12005 PF13808 DDE_Tnp_1-associated G7042_12015 PF01810 LysE type translocator G7042_12020 PF12729 Four helix bundle sensory module for signal transduction G7042_12020 PF00672 HAMP domain G7042_12020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_12025 PF07509 Protein of unknown function (DUF1523) G7042_12040 PF01156 Inosine-uridine preferring nucleoside hydrolase G7042_12045 PF00849 RNA pseudouridylate synthase G7042_12050 PF01048 Phosphorylase superfamily G7042_12055 PF00465 Iron-containing alcohol dehydrogenase G7042_12090 PF00437 Type II/IV secretion system protein G7042_12095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain G7042_12105 PF13629 Pilus formation protein N terminal region G7042_12105 PF04972 BON domain G7042_12105 PF00263 Bacterial type II and III secretion system protein G7042_12135 PF04355 SmpA / OmlA family G7042_12140 PF13460 NAD(P)H-binding G7042_12145 PF03658 RnfH family Ubiquitin G7042_12150 PF03364 Polyketide cyclase / dehydrase and lipid transport G7042_12160 PF01668 SmpB protein G7042_12170 PF13356 Arm DNA-binding domain G7042_12170 PF00589 Phage integrase family G7042_12215 PF00180 Isocitrate/isopropylmalate dehydrogenase G7042_12220 PF12833 Helix-turn-helix domain G7042_12225 PF01238 Phosphomannose isomerase type I G7042_12250 PF13808 DDE_Tnp_1-associated G7042_12250 PF01609 Transposase DDE domain G7042_12270 PF00367 phosphotransferase system, EIIB G7042_12270 PF02378 Phosphotransferase system, EIIC G7042_12275 PF00356 Bacterial regulatory proteins, lacI family G7042_12275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family G7042_12300 PF00034 Cytochrome c G7042_12300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III G7042_12310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain G7042_12310 PF06481 COX Aromatic Rich Motif G7042_12315 PF00115 Cytochrome C and Quinol oxidase polypeptide I G7042_12320 PF00510 Cytochrome c oxidase subunit III G7042_12325 PF03626 Prokaryotic Cytochrome C oxidase subunit IV G7042_12330 PF01040 UbiA prenyltransferase family G7042_12335 PF07690 Major Facilitator Superfamily G7042_12340 PF00561 alpha/beta hydrolase fold G7042_12355 PF01156 Inosine-uridine preferring nucleoside hydrolase G7042_12370 PF00127 Copper binding proteins, plastocyanin/azurin family G7042_12375 PF02424 ApbE family G7042_12380 PF00486 Transcriptional regulatory protein, C terminal G7042_12380 PF00072 Response regulator receiver domain G7042_12390 PF03372 Endonuclease/Exonuclease/phosphatase family G7042_12395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G7042_12400 PF00873 AcrB/AcrD/AcrF family G7042_12430 PF10437 Bacterial lipoate protein ligase C-terminus G7042_12430 PF03099 Biotin/lipoate A/B protein ligase family G7042_12435 PF03707 Bacterial signalling protein N terminal repeat G7042_12435 PF00563 EAL domain G7042_12435 PF00990 Diguanylate cyclase, GGDEF domain G7042_12440 PF00873 AcrB/AcrD/AcrF family G7042_12455 PF04143 Sulphur transport G7042_12475 PF02308 MgtC family G7042_12480 PF13407 Periplasmic binding protein domain G7042_12480 PF00356 Bacterial regulatory proteins, lacI family G7042_12485 PF00251 Glycosyl hydrolases family 32 N-terminal domain G7042_12485 PF08244 Glycosyl hydrolases family 32 C terminal G7042_12490 PF00367 phosphotransferase system, EIIB G7042_12490 PF02378 Phosphotransferase system, EIIC G7042_12495 PF00294 pfkB family carbohydrate kinase G7042_12500 PF11471 Maltoporin periplasmic N-terminal extension G7042_12500 PF02264 LamB porin G7042_12505 PF00684 DnaJ central domain G7042_12505 PF01556 DnaJ C terminal domain G7042_12505 PF00226 DnaJ domain G7042_12510 PF00012 Hsp70 protein G7042_12515 PF01025 GrpE G7042_12520 PF01513 ATP-NAD kinase G7042_12525 PF02463 RecF/RecN/SMC N terminal domain G7042_12535 PF02833 DHHA2 domain G7042_12535 PF01368 DHH family G7042_12545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G7042_12550 PF12704 MacB-like periplasmic core domain G7042_12550 PF00005 ABC transporter G7042_12550 PF02687 FtsX-like permease family G7042_12555 PF02321 Outer membrane efflux protein G7042_12560 PF08021 Siderophore-interacting FAD-binding domain G7042_12560 PF04954 Siderophore-interacting protein G7042_12565 PF00793 DAHP synthetase I family G7042_12570 PF00872 Transposase, Mutator family G7042_12575 PF00816 H-NS histone family G7042_12600 PF00072 Response regulator receiver domain G7042_12600 PF01339 CheB methylesterase G7042_12605 PF00266 Aminotransferase class-V G7042_12635 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G7042_12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_12635 PF01627 Hpt domain G7042_12635 PF00512 His Kinase A (phospho-acceptor) domain G7042_12635 PF00672 HAMP domain G7042_12635 PF00072 Response regulator receiver domain G7042_12650 PF00989 PAS fold G7042_12650 PF00990 Diguanylate cyclase, GGDEF domain G7042_12650 PF01590 GAF domain G7042_12650 PF00563 EAL domain G7042_12655 PF01136 Peptidase family U32 G7042_12655 PF16325 Peptidase family U32 C-terminal domain G7042_12660 PF12838 4Fe-4S dicluster domain G7042_12665 PF01168 Alanine racemase, N-terminal domain G7042_12665 PF00842 Alanine racemase, C-terminal domain G7042_12670 PF03796 DnaB-like helicase C terminal domain G7042_12670 PF00772 DnaB-like helicase N terminal domain G7042_12680 PF12792 CSS motif domain associated with EAL G7042_12680 PF00563 EAL domain G7042_12685 PF02872 5'-nucleotidase, C-terminal domain G7042_12685 PF00149 Calcineurin-like phosphoesterase G7042_12705 PF00158 Sigma-54 interaction domain G7042_12705 PF02954 Bacterial regulatory protein, Fis family G7042_12705 PF00072 Response regulator receiver domain G7042_12710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G7042_12710 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase G7042_12720 PF04102 SlyX G7042_12725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G7042_12730 PF09526 Probable metal-binding protein (DUF2387) G7042_12740 PF01584 CheW-like domain G7042_12740 PF00072 Response regulator receiver domain G7042_12745 PF00561 alpha/beta hydrolase fold G7042_12750 PF00563 EAL domain G7042_12750 PF01590 GAF domain G7042_12750 PF00990 Diguanylate cyclase, GGDEF domain G7042_12750 PF00360 Phytochrome region G7042_12755 PF06794 Uncharacterised protein family (UPF0270) G7042_12760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain G7042_12760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain G7042_12760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain G7042_12780 PF00535 Glycosyl transferase family 2 G7042_12790 PF01522 Polysaccharide deacetylase G7042_12795 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase G7042_12800 PF00892 EamA-like transporter family G7042_12810 PF00485 Phosphoribulokinase / Uridine kinase family G7042_12825 PF02566 OsmC-like protein G7042_12830 PF00027 Cyclic nucleotide-binding domain G7042_12830 PF13545 Crp-like helix-turn-helix domain G7042_12835 PF08241 Methyltransferase domain G7042_12840 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading G7042_12840 PF18416 N-acetylglucosamine binding protein domain 2 G7042_12845 PF12561 ToxR activated gene A lipoprotein domain G7042_12845 PF17945 Beta/Gamma crystallin G7042_12885 PF01243 Pyridoxamine 5'-phosphate oxidase G7042_12890 PF06228 Haem utilisation ChuX/HutX G7042_12900 PF01032 FecCD transport family G7042_12905 PF00005 ABC transporter G7042_12915 PF01370 NAD dependent epimerase/dehydratase family G7042_12925 PF12848 ABC transporter G7042_12925 PF00005 ABC transporter G7042_12935 PF00860 Permease family G7042_12940 PF05099 Tellurite resistance protein TerB G7042_12940 PF00226 DnaJ domain G7042_12945 PF00483 Nucleotidyl transferase G7042_12950 PF01636 Phosphotransferase enzyme family G7042_12955 PF04453 LPS transport system D G7042_12955 PF03968 OstA-like protein G7042_12960 PF00639 PPIC-type PPIASE domain G7042_12960 PF09312 SurA N-terminal domain G7042_12965 PF04166 Pyridoxal phosphate biosynthetic protein PdxA G7042_12970 PF00398 Ribosomal RNA adenine dimethylase G7042_12975 PF04379 ApaG domain G7042_12980 PF00149 Calcineurin-like phosphoesterase G7042_12995 PF00296 Luciferase-like monooxygenase G7042_13015 PF13193 AMP-binding enzyme C-terminal domain G7042_13015 PF00501 AMP-binding enzyme G7042_13020 PF07670 Nucleoside recognition G7042_13025 PF01018 GTP1/OBG G7042_13025 PF01926 50S ribosome-binding GTPase G7042_13030 PF01016 Ribosomal L27 protein G7042_13035 PF00829 Ribosomal prokaryotic L21 protein G7042_13040 PF00348 Polyprenyl synthetase G7042_13045 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) G7042_13050 PF01145 SPFH domain / Band 7 family G7042_13055 PF12221 Bacterial membrane protein N terminal G7042_13055 PF01145 SPFH domain / Band 7 family G7042_13060 PF01926 50S ribosome-binding GTPase G7042_13060 PF13167 GTP-binding GTPase N-terminal G7042_13060 PF16360 GTP-binding GTPase Middle Region G7042_13065 PF17209 Hfq protein G7042_13075 PF01119 DNA mismatch repair protein, C-terminal domain G7042_13075 PF08676 MutL C terminal dimerisation domain G7042_13080 PF01520 N-acetylmuramoyl-L-alanine amidase G7042_13085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE G7042_13090 PF01256 Carbohydrate kinase G7042_13090 PF03853 YjeF-related protein N-terminus G7042_13095 PF08331 Domain of unknown function (DUF1730) G7042_13100 PF00480 ROK family G7042_13110 PF00005 ABC transporter G7042_13110 PF09383 NIL domain G7042_13115 PF00528 Binding-protein-dependent transport system inner membrane component G7042_13120 PF03180 NLPA lipoprotein G7042_13125 PF02357 Transcription termination factor nusG G7042_13130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_13130 PF12729 Four helix bundle sensory module for signal transduction G7042_13130 PF00672 HAMP domain G7042_13135 PF00563 EAL domain G7042_13135 PF03707 Bacterial signalling protein N terminal repeat G7042_13135 PF00990 Diguanylate cyclase, GGDEF domain G7042_13150 PF01966 HD domain G7042_13155 PF00512 His Kinase A (phospho-acceptor) domain G7042_13155 PF00989 PAS fold G7042_13155 PF01627 Hpt domain G7042_13155 PF18415 Histidine kinase receptor ArcB trans-membrane domain G7042_13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_13155 PF00072 Response regulator receiver domain G7042_13180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_13180 PF03466 LysR substrate binding domain G7042_13190 PF01259 SAICAR synthetase G7042_13195 PF06804 NlpB/DapX lipoprotein G7042_13200 PF00701 Dihydrodipicolinate synthetase family G7042_13205 PF01842 ACT domain G7042_13210 PF00578 AhpC/TSA family G7042_13215 PF03887 YfbU domain G7042_13220 PF04217 Protein of unknown function, DUF412 G7042_13225 PF00871 Acetokinase family G7042_13230 PF07085 DRTGG domain G7042_13230 PF01515 Phosphate acetyl/butaryl transferase G7042_13235 PF10369 Small subunit of acetolactate synthase G7042_13240 PF00205 Thiamine pyrophosphate enzyme, central domain G7042_13240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G7042_13240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain G7042_13255 PF01569 PAP2 superfamily G7042_13265 PF00682 HMGL-like G7042_13265 PF08502 LeuA allosteric (dimerisation) domain G7042_13270 PF00180 Isocitrate/isopropylmalate dehydrogenase G7042_13275 PF00330 Aconitase family (aconitate hydratase) G7042_13280 PF00694 Aconitase C-terminal domain G7042_13300 PF00528 Binding-protein-dependent transport system inner membrane component G7042_13305 PF00005 ABC transporter G7042_13310 PF13638 PIN domain G7042_13310 PF02562 PhoH-like protein G7042_13320 PF08343 Ribonucleotide reductase N-terminal G7042_13320 PF02867 Ribonucleotide reductase, barrel domain G7042_13320 PF00317 Ribonucleotide reductase, all-alpha domain G7042_13350 PF18337 RapA N-terminal Tudor like domain G7042_13350 PF18339 RapA N-terminal Tudor like domain 1 G7042_13350 PF00176 SNF2 family N-terminal domain G7042_13350 PF00271 Helicase conserved C-terminal domain G7042_13350 PF12137 RNA polymerase recycling family C-terminal G7042_13355 PF00849 RNA pseudouridylate synthase G7042_13365 PF13188 PAS domain G7042_13365 PF03707 Bacterial signalling protein N terminal repeat G7042_13365 PF00990 Diguanylate cyclase, GGDEF domain G7042_13365 PF00563 EAL domain G7042_13375 PF00118 TCP-1/cpn60 chaperonin family G7042_13380 PF00166 Chaperonin 10 Kd subunit G7042_13385 PF01554 MatE G7042_13390 PF04186 FxsA cytoplasmic membrane protein G7042_13395 PF10415 Fumarase C C-terminus G7042_13395 PF00206 Lyase G7042_13400 PF03605 Anaerobic c4-dicarboxylate membrane transporter G7042_13405 PF00267 Gram-negative porin G7042_13410 PF07690 Major Facilitator Superfamily G7042_13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_13415 PF03466 LysR substrate binding domain G7042_13420 PF04151 Bacterial pre-peptidase C-terminal domain G7042_13420 PF02868 Thermolysin metallopeptidase, alpha-helical domain G7042_13420 PF01447 Thermolysin metallopeptidase, catalytic domain G7042_13420 PF03413 Peptidase propeptide and YPEB domain G7042_13420 PF07504 Fungalysin/Thermolysin Propeptide Motif G7042_13425 PF13302 Acetyltransferase (GNAT) domain G7042_13430 PF13302 Acetyltransferase (GNAT) domain G7042_13445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain G7042_13445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold G7042_13450 PF07690 Major Facilitator Superfamily G7042_13455 PF01725 Ham1 family G7042_13460 PF06969 HemN C-terminal domain G7042_13460 PF04055 Radical SAM superfamily G7042_13465 PF03889 Alternative ribosome-rescue factor A G7042_13470 PF01872 RibD C-terminal domain G7042_13475 PF13411 MerR HTH family regulatory protein G7042_13480 PF02142 MGS-like domain G7042_13480 PF01808 AICARFT/IMPCHase bienzyme G7042_13485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain G7042_13485 PF02844 Phosphoribosylglycinamide synthetase, N domain G7042_13485 PF02843 Phosphoribosylglycinamide synthetase, C domain G7042_13515 PF13358 DDE superfamily endonuclease G7042_13515 PF13592 Winged helix-turn helix G7042_13525 PF04545 Sigma-70, region 4 G7042_13525 PF03979 Sigma-70 factor, region 1.1 G7042_13525 PF00140 Sigma-70 factor, region 1.2 G7042_13525 PF04542 Sigma-70 region 2 G7042_13525 PF04539 Sigma-70 region 3 G7042_13525 PF04546 Sigma-70, non-essential region G7042_13530 PF08278 DNA primase DnaG DnaB-binding G7042_13530 PF01807 CHC2 zinc finger G7042_13530 PF08275 DNA primase catalytic core, N-terminal domain G7042_13530 PF10410 DnaB-helicase binding domain of primase G7042_13535 PF09424 Yqey-like protein G7042_13540 PF01165 Ribosomal protein S21 G7042_13545 PF00814 Glycoprotease family G7042_13550 PF04539 Sigma-70 region 3 G7042_13550 PF04542 Sigma-70 region 2 G7042_13550 PF00140 Sigma-70 factor, region 1.2 G7042_13550 PF04545 Sigma-70, region 4 G7042_13555 PF01551 Peptidase family M23 G7042_13555 PF01476 LysM domain G7042_13560 PF09335 SNARE associated Golgi protein G7042_13570 PF01975 Survival protein SurE G7042_13575 PF01142 tRNA pseudouridine synthase D (TruD) G7042_13580 PF02542 YgbB family G7042_13585 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase G7042_13590 PF04977 Septum formation initiator G7042_13595 PF03952 Enolase, N-terminal domain G7042_13595 PF00113 Enolase, C-terminal TIM barrel domain G7042_13600 PF06418 CTP synthase N-terminus G7042_13600 PF00117 Glutamine amidotransferase class-I G7042_13605 PF03819 MazG nucleotide pyrophosphohydrolase domain G7042_13610 PF13291 ACT domain G7042_13610 PF04607 Region found in RelA / SpoT proteins G7042_13610 PF02824 TGS domain G7042_13615 PF05958 tRNA (Uracil-5-)-methyltransferase G7042_13615 PF01938 TRAM domain G7042_13620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G7042_13620 PF00072 Response regulator receiver domain G7042_13620 PF00512 His Kinase A (phospho-acceptor) domain G7042_13620 PF01627 Hpt domain G7042_13620 PF00672 HAMP domain G7042_13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_13625 PF07308 Protein of unknown function (DUF1456) G7042_13630 PF01510 N-acetylmuramoyl-L-alanine amidase G7042_13635 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ G7042_13640 PF02565 Recombination protein O C terminal G7042_13640 PF11967 Recombination protein O N terminal G7042_13645 PF01926 50S ribosome-binding GTPase G7042_13645 PF07650 KH domain G7042_13650 PF00035 Double-stranded RNA binding motif G7042_13650 PF14622 Ribonuclease-III-like G7042_13655 PF10502 Signal peptidase, peptidase S26 G7042_13660 PF00679 Elongation factor G C-terminus G7042_13660 PF06421 GTP-binding protein LepA C-terminus G7042_13660 PF03144 Elongation factor Tu domain 2 G7042_13660 PF00009 Elongation factor Tu GTP binding domain G7042_13670 PF17188 MucB/RseB C-terminal domain G7042_13670 PF03888 MucB/RseB N-terminal domain G7042_13675 PF03873 Anti sigma-E protein RseA, C-terminal domain G7042_13675 PF03872 Anti sigma-E protein RseA, N-terminal domain G7042_13680 PF04542 Sigma-70 region 2 G7042_13680 PF08281 Sigma-70, region 4 G7042_13685 PF00890 FAD binding domain G7042_13685 PF02910 Fumarate reductase flavoprotein C-term G7042_13695 PF03937 Flavinator of succinate dehydrogenase G7042_13700 PF01571 Aminomethyltransferase folate-binding domain G7042_13720 PF03091 CutA1 divalent ion tolerance protein G7042_13725 PF02683 Cytochrome C biogenesis protein transmembrane region G7042_13725 PF11412 Disulphide bond corrector protein DsbC G7042_13735 PF01266 FAD dependent oxidoreductase G7042_13740 PF01116 Fructose-bisphosphate aldolase class-II G7042_13745 PF00162 Phosphoglycerate kinase G7042_13750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain G7042_13750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain G7042_13755 PF00480 ROK family G7042_13780 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) G7042_13790 PF00005 ABC transporter G7042_13840 PF13808 DDE_Tnp_1-associated G7042_13840 PF01609 Transposase DDE domain G7042_13850 PF03600 Citrate transporter G7042_13850 PF02080 TrkA-C domain G7042_13855 PF00009 Elongation factor Tu GTP binding domain G7042_13860 PF01507 Phosphoadenosine phosphosulfate reductase family G7042_13865 PF14824 Sirohaem biosynthesis protein central G7042_13865 PF10414 Sirohaem synthase dimerisation region G7042_13865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases G7042_13870 PF16200 C-terminal region of band_7 G7042_13870 PF01145 SPFH domain / Band 7 family G7042_13875 PF01957 NfeD-like C-terminal, partner-binding G7042_13880 PF01380 SIS domain G7042_13880 PF00571 CBS domain G7042_13885 PF00005 ABC transporter G7042_13885 PF12848 ABC transporter G7042_13895 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ G7042_13925 PF00474 Sodium:solute symporter family G7042_13940 PF00924 Mechanosensitive ion channel G7042_13945 PF00871 Acetokinase family G7042_13950 PF04074 YhcH/YjgK/YiaL G7042_13960 PF01177 Asp/Glu/Hydantoin racemase G7042_13965 PF01810 LysE type translocator G7042_13975 PF00392 Bacterial regulatory proteins, gntR family G7042_13975 PF00155 Aminotransferase class I and II G7042_14000 PF00209 Sodium:neurotransmitter symporter family G7042_14010 PF00209 Sodium:neurotransmitter symporter family G7042_14030 PF07690 Major Facilitator Superfamily G7042_14045 PF01037 Lrp/AsnC ligand binding domain G7042_14060 PF01047 MarR family G7042_14065 PF02566 OsmC-like protein G7042_14070 PF16884 N-terminal domain of oxidoreductase G7042_14070 PF00107 Zinc-binding dehydrogenase G7042_14075 PF00293 NUDIX domain G7042_14090 PF03710 Glutamate-ammonia ligase adenylyltransferase G7042_14090 PF08335 GlnD PII-uridylyltransferase G7042_14095 PF00455 DeoR C terminal sensor domain G7042_14095 PF08220 DeoR-like helix-turn-helix domain G7042_14145 PF05170 AsmA family G7042_14150 PF00326 Prolyl oligopeptidase family G7042_14150 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain G7042_14165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G7042_14170 PF00072 Response regulator receiver domain G7042_14170 PF00486 Transcriptional regulatory protein, C terminal G7042_14175 PF16527 Two-component sensor protein CpxA, periplasmic domain G7042_14175 PF00672 HAMP domain G7042_14175 PF00512 His Kinase A (phospho-acceptor) domain G7042_14175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_14180 PF09297 NADH pyrophosphatase zinc ribbon domain G7042_14180 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain G7042_14180 PF00293 NUDIX domain G7042_14210 PF01521 Iron-sulphur cluster biosynthesis G7042_14220 PF00654 Voltage gated chloride channel G7042_14225 PF00202 Aminotransferase class-III G7042_14240 PF01569 PAP2 superfamily G7042_14250 PF11849 Domain of unknown function (DUF3369) G7042_14255 PF03466 LysR substrate binding domain G7042_14255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_14260 PF00893 Small Multidrug Resistance protein G7042_14265 PF00893 Small Multidrug Resistance protein G7042_14270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G7042_14275 PF00912 Transglycosylase G7042_14275 PF00905 Penicillin binding protein transpeptidase domain G7042_14275 PF14814 Bifunctional transglycosylase second domain G7042_14280 PF08482 ATP-dependent helicase C-terminal G7042_14280 PF00270 DEAD/DEAH box helicase G7042_14280 PF04408 Helicase associated domain (HA2) G7042_14280 PF00271 Helicase conserved C-terminal domain G7042_14290 PF03749 Sugar fermentation stimulation protein RE domain G7042_14290 PF17746 SfsA N-terminal OB domain G7042_14295 PF01258 Prokaryotic dksA/traR C4-type zinc finger G7042_14300 PF00749 tRNA synthetases class I (E and Q), catalytic domain G7042_14305 PF01743 Poly A polymerase head domain G7042_14305 PF12627 Probable RNA and SrmB- binding site of polymerase A G7042_14305 PF12626 Polymerase A arginine-rich C-terminus G7042_14310 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) G7042_14315 PF02548 Ketopantoate hydroxymethyltransferase G7042_14320 PF02569 Pantoate-beta-alanine ligase G7042_14330 PF01061 ABC-2 type transporter G7042_14335 PF00005 ABC transporter G7042_14340 PF00156 Phosphoribosyl transferase domain G7042_14345 PF00440 Bacterial regulatory proteins, tetR family G7042_14350 PF02441 Flavoprotein G7042_14355 PF01225 Mur ligase family, catalytic domain G7042_14355 PF02875 Mur ligase family, glutamate ligase domain G7042_14355 PF08245 Mur ligase middle domain G7042_14360 PF00719 Inorganic pyrophosphatase G7042_14365 PF01208 Uroporphyrinogen decarboxylase (URO-D) G7042_14370 PF00293 NUDIX domain G7042_14370 PF09297 NADH pyrophosphatase zinc ribbon domain G7042_14375 PF14850 DNA-binding domain of Proline dehydrogenase G7042_14375 PF00171 Aldehyde dehydrogenase family G7042_14375 PF01619 Proline dehydrogenase G7042_14375 PF18327 Proline utilization A proline dehydrogenase N-terminal domain G7042_14380 PF08239 Bacterial SH3 domain G7042_14385 PF07885 Ion channel G7042_14385 PF00027 Cyclic nucleotide-binding domain G7042_14395 PF01641 SelR domain G7042_14400 PF00128 Alpha amylase, catalytic domain G7042_14400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) G7042_14405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) G7042_14405 PF00128 Alpha amylase, catalytic domain G7042_14405 PF02806 Alpha amylase, C-terminal all-beta domain G7042_14410 PF02446 4-alpha-glucanotransferase G7042_14415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain G7042_14415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain G7042_14420 PF01263 Aldose 1-epimerase G7042_14425 PF02445 Quinolinate synthetase A protein G7042_14430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_14430 PF00672 HAMP domain G7042_14495 PF16331 TolA binding protein trimerisation G7042_14495 PF13174 Tetratricopeptide repeat G7042_14500 PF00691 OmpA family G7042_14505 PF07676 WD40-like Beta Propeller Repeat G7042_14505 PF04052 TolB amino-terminal domain G7042_14515 PF02472 Biopolymer transport protein ExbD/TolR G7042_14520 PF01618 MotA/TolQ/ExbB proton channel family G7042_14525 PF03061 Thioesterase superfamily G7042_14530 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) G7042_14535 PF08173 Membrane bound YbgT-like protein G7042_14540 PF02322 Cytochrome bd terminal oxidase subunit II G7042_14545 PF01654 Cytochrome bd terminal oxidase subunit I G7042_14550 PF17864 RuvB AAA lid domain G7042_14550 PF05491 RuvB C-terminal winged helix domain G7042_14550 PF05496 Holliday junction DNA helicase RuvB P-loop domain G7042_14555 PF01330 RuvA N terminal domain G7042_14555 PF07499 RuvA, C-terminal domain G7042_14565 PF03129 Anticodon binding domain G7042_14565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) G7042_14565 PF04073 Aminoacyl-tRNA editing domain G7042_14575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family G7042_14580 PF00583 Acetyltransferase (GNAT) family G7042_14585 PF16658 Class II release factor RF3, C-terminal domain G7042_14585 PF03144 Elongation factor Tu domain 2 G7042_14585 PF00009 Elongation factor Tu GTP binding domain G7042_14590 PF00072 Response regulator receiver domain G7042_14590 PF00990 Diguanylate cyclase, GGDEF domain G7042_14600 PF01037 Lrp/AsnC ligand binding domain G7042_14610 PF05762 VWA domain containing CoxE-like protein G7042_14615 PF07728 AAA domain (dynein-related subfamily) G7042_14615 PF17868 AAA lid domain G7042_14615 PF12592 Protein of unknown function (DUF3763) G7042_14625 PF00583 Acetyltransferase (GNAT) family G7042_14625 PF13673 Acetyltransferase (GNAT) domain G7042_14635 PF00501 AMP-binding enzyme G7042_14645 PF04262 Glutamate-cysteine ligase G7042_14650 PF05193 Peptidase M16 inactive domain G7042_14650 PF00675 Insulinase (Peptidase family M16) G7042_14655 PF09335 SNARE associated Golgi protein G7042_14660 PF00107 Zinc-binding dehydrogenase G7042_14660 PF08240 Alcohol dehydrogenase GroES-like domain G7042_14685 PF00970 Oxidoreductase FAD-binding domain G7042_14685 PF00175 Oxidoreductase NAD-binding domain G7042_14690 PF03948 Ribosomal protein L9, C-terminal domain G7042_14690 PF01281 Ribosomal protein L9, N-terminal domain G7042_14695 PF01084 Ribosomal protein S18 G7042_14700 PF01250 Ribosomal protein S6 G7042_14705 PF01566 Natural resistance-associated macrophage protein G7042_14710 PF02272 DHHA1 domain G7042_14710 PF01411 tRNA synthetases class II (A) G7042_14710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain G7042_14735 PF13673 Acetyltransferase (GNAT) domain G7042_14745 PF08032 RNA 2'-O ribose methyltransferase substrate binding G7042_14745 PF00588 SpoU rRNA Methylase family G7042_14750 PF17876 Cold shock domain G7042_14750 PF08461 Ribonuclease R winged-helix domain G7042_14750 PF08206 Ribonuclease B OB domain G7042_14750 PF00773 RNB domain G7042_14750 PF00575 S1 RNA binding domain G7042_14755 PF00990 Diguanylate cyclase, GGDEF domain G7042_14760 PF02664 S-Ribosylhomocysteinase (LuxS) G7042_14770 PF00543 Nitrogen regulatory protein P-II G7042_14775 PF00795 Carbon-nitrogen hydrolase G7042_14775 PF02540 NAD synthase G7042_14790 PF05567 Neisseria PilC beta-propeller domain G7042_14810 PF07963 Prokaryotic N-terminal methylation motif G7042_14810 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor G7042_14815 PF02401 LytB protein G7042_14820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase G7042_14825 PF01252 Signal peptidase (SPase) II G7042_14830 PF08264 Anticodon-binding domain of tRNA G7042_14830 PF06827 Zinc finger found in FPG and IleRS G7042_14830 PF00133 tRNA synthetases class I (I, L, M and V) G7042_14835 PF06574 FAD synthetase G7042_14835 PF01687 Riboflavin kinase G7042_14840 PF03023 Lipid II flippase MurJ G7042_14845 PF01649 Ribosomal protein S20 G7042_14850 PF01022 Bacterial regulatory protein, arsR family G7042_14855 PF03466 LysR substrate binding domain G7042_14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_14865 PF06965 Na+/H+ antiporter 1 G7042_14870 PF00303 Thymidylate synthase G7042_14875 PF01790 Prolipoprotein diacylglyceryl transferase G7042_14880 PF01590 GAF domain G7042_14880 PF02896 PEP-utilising enzyme, TIM barrel domain G7042_14880 PF00391 PEP-utilising enzyme, mobile domain G7042_14880 PF05524 PEP-utilising enzyme, N-terminal G7042_14885 PF00293 NUDIX domain G7042_14890 PF02976 DNA mismatch repair enzyme MutH G7042_14900 PF01245 Ribosomal protein L19 G7042_14905 PF01746 tRNA (Guanine-1)-methyltransferase G7042_14910 PF01782 RimM N-terminal domain G7042_14910 PF05239 PRC-barrel domain G7042_14915 PF00886 Ribosomal protein S16 G7042_14920 PF00448 SRP54-type protein, GTPase domain G7042_14920 PF02881 SRP54-type protein, helical bundle domain G7042_14920 PF02978 Signal peptide binding domain G7042_14925 PF01578 Cytochrome C assembly protein G7042_14930 PF00571 CBS domain G7042_14930 PF01595 Cyclin M transmembrane N-terminal domain G7042_14930 PF03471 Transporter associated domain G7042_14935 PF02082 Transcriptional regulator G7042_14940 PF00970 Oxidoreductase FAD-binding domain G7042_14940 PF00042 Globin G7042_14940 PF00175 Oxidoreductase NAD-binding domain G7042_14945 PF08238 Sel1 repeat G7042_14950 PF00056 lactate/malate dehydrogenase, NAD binding domain G7042_14950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain G7042_14955 PF00528 Binding-protein-dependent transport system inner membrane component G7042_14960 PF00528 Binding-protein-dependent transport system inner membrane component G7042_14965 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_14970 PF00005 ABC transporter G7042_14975 PF01316 Arginine repressor, DNA binding domain G7042_14975 PF02863 Arginine repressor, C-terminal domain G7042_14980 PF04261 Dyp-type peroxidase family G7042_14985 PF00005 ABC transporter G7042_14985 PF08402 TOBE domain G7042_14995 PF13416 Bacterial extracellular solute-binding protein G7042_15000 PF00543 Nitrogen regulatory protein P-II G7042_15005 PF00472 RF-1 domain G7042_15010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain G7042_15010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain G7042_15015 PF01773 Na+ dependent nucleoside transporter N-terminus G7042_15015 PF07670 Nucleoside recognition G7042_15015 PF07662 Na+ dependent nucleoside transporter C-terminus G7042_15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_15020 PF03466 LysR substrate binding domain G7042_15025 PF00255 Glutathione peroxidase G7042_15035 PF02595 Glycerate kinase family G7042_15040 PF02447 GntP family permease G7042_15045 PF13556 PucR C-terminal helix-turn-helix domain G7042_15045 PF17853 GGDEF-like domain G7042_15045 PF05651 Putative sugar diacid recognition G7042_15050 PF06062 Uncharacterised protein family (UPF0231) G7042_15065 PF08447 PAS fold G7042_15065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_15070 PF03372 Endonuclease/Exonuclease/phosphatase family G7042_15085 PF00270 DEAD/DEAH box helicase G7042_15085 PF00271 Helicase conserved C-terminal domain G7042_15095 PF08534 Redoxin G7042_15100 PF00403 Heavy-metal-associated domain G7042_15120 PF02583 Metal-sensitive transcriptional repressor G7042_15125 PF00155 Aminotransferase class I and II G7042_15135 PF03466 LysR substrate binding domain G7042_15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_15145 PF04055 Radical SAM superfamily G7042_15150 PF11230 Protein of unknown function (DUF3029) G7042_15185 PF00535 Glycosyl transferase family 2 G7042_15190 PF01522 Polysaccharide deacetylase G7042_15190 PF14883 Hypothetical glycosyl hydrolase family 13 G7042_15225 PF00672 HAMP domain G7042_15225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_15225 PF17200 Single Cache domain 2 G7042_15230 PF18416 N-acetylglucosamine binding protein domain 2 G7042_15230 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading G7042_15235 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_15240 PF00005 ABC transporter G7042_15245 PF00528 Binding-protein-dependent transport system inner membrane component G7042_15250 PF00528 Binding-protein-dependent transport system inner membrane component G7042_15255 PF00291 Pyridoxal-phosphate dependent enzyme G7042_15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_15260 PF03466 LysR substrate binding domain G7042_15265 PF00005 ABC transporter G7042_15265 PF12857 TOBE-like domain G7042_15270 PF00528 Binding-protein-dependent transport system inner membrane component G7042_15280 PF00528 Binding-protein-dependent transport system inner membrane component G7042_15295 PF13194 Domain of unknown function (DUF4010) G7042_15300 PF12464 Maltose acetyltransferase G7042_15300 PF14602 Hexapeptide repeat of succinyl-transferase G7042_15330 PF14552 Tautomerase enzyme G7042_15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_15340 PF03466 LysR substrate binding domain G7042_15345 PF14698 Argininosuccinate lyase C-terminal G7042_15345 PF00206 Lyase G7042_15350 PF00764 Arginosuccinate synthase G7042_15355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain G7042_15355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain G7042_15360 PF00696 Amino acid kinase family G7042_15365 PF02774 Semialdehyde dehydrogenase, dimerisation domain G7042_15365 PF01118 Semialdehyde dehydrogenase, NAD binding domain G7042_15370 PF01546 Peptidase family M20/M25/M40 G7042_15370 PF07687 Peptidase dimerisation domain G7042_15375 PF00311 Phosphoenolpyruvate carboxylase G7042_15390 PF03960 ArsC family G7042_15395 PF01758 Sodium Bile acid symporter family G7042_15400 PF02374 Anion-transporting ATPase G7042_15405 PF06953 Arsenical resistance operon trans-acting repressor ArsD G7042_15415 PF00488 MutS domain V G7042_15415 PF05190 MutS family domain IV G7042_15415 PF05192 MutS domain III G7042_15415 PF05188 MutS domain II G7042_15415 PF01624 MutS domain I G7042_15420 PF02028 BCCT, betaine/carnitine/choline family transporter G7042_15435 PF04222 Protein of unknown function (DUF416) G7042_15440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G7042_15445 PF08525 Opacity-associated protein A N-terminal motif G7042_15445 PF01551 Peptidase family M23 G7042_15445 PF01476 LysM domain G7042_15465 PF01297 Zinc-uptake complex component A periplasmic G7042_15470 PF00005 ABC transporter G7042_15475 PF00950 ABC 3 transport family G7042_15480 PF03466 LysR substrate binding domain G7042_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_15490 PF03167 Uracil DNA glycosylase superfamily G7042_15505 PF01541 GIY-YIG catalytic domain G7042_15525 PF01553 Acyltransferase G7042_15545 PF00085 Thioredoxin G7042_15550 PF07681 DoxX G7042_15555 PF00226 DnaJ domain G7042_15555 PF01556 DnaJ C terminal domain G7042_15555 PF00684 DnaJ central domain G7042_15610 PF00521 DNA gyrase/topoisomerase IV, subunit A G7042_15610 PF03989 DNA gyrase C-terminal domain, beta-propeller G7042_15615 PF00204 DNA gyrase B G7042_15615 PF01751 Toprim domain G7042_15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_15615 PF00986 DNA gyrase B subunit, carboxyl terminus G7042_15625 PF00293 NUDIX domain G7042_15630 PF05728 Uncharacterised protein family (UPF0227) G7042_15635 PF00149 Calcineurin-like phosphoesterase G7042_15640 PF06853 Protein of unknown function (DUF1249) G7042_15645 PF00293 NUDIX domain G7042_15650 PF02321 Outer membrane efflux protein G7042_15655 PF00294 pfkB family carbohydrate kinase G7042_15655 PF01467 Cytidylyltransferase-like G7042_15660 PF03279 Bacterial lipid A biosynthesis acyltransferase G7042_15675 PF01865 Protein of unknown function DUF47 G7042_15680 PF01384 Phosphate transporter family G7042_15685 PF01966 HD domain G7042_15685 PF12627 Probable RNA and SrmB- binding site of polymerase A G7042_15685 PF01743 Poly A polymerase head domain G7042_15690 PF13401 AAA domain G7042_15690 PF01471 Putative peptidoglycan binding domain G7042_15695 PF16537 Type II secretion system protein B G7042_15700 PF14815 NUDIX domain G7042_15700 PF00730 HhH-GPD superfamily base excision DNA repair protein G7042_15700 PF00633 Helix-hairpin-helix motif G7042_15700 PF10576 Iron-sulfur binding domain of endonuclease III G7042_15705 PF04362 Bacterial Fe(2+) trafficking G7042_15710 PF01464 Transglycosylase SLT domain G7042_15710 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain G7042_15715 PF04076 Bacterial OB fold (BOF) protein G7042_15720 PF00657 GDSL-like Lipase/Acylhydrolase G7042_15730 PF01389 OmpA-like transmembrane domain G7042_15730 PF00691 OmpA family G7042_15735 PF03886 ABC-type transport auxiliary lipoprotein component G7042_15740 PF02470 MlaD protein G7042_15745 PF04403 Paraquat-inducible protein A G7042_15750 PF17209 Hfq protein G7042_15755 PF13419 Haloacid dehalogenase-like hydrolase G7042_15770 PF00701 Dihydrodipicolinate synthetase family G7042_15775 PF05175 Methyltransferase small domain G7042_15775 PF08468 Methyltransferase small domain N-terminal G7042_15780 PF00483 Nucleotidyl transferase G7042_15785 PF08323 Starch synthase catalytic domain G7042_15785 PF00534 Glycosyl transferases group 1 G7042_15820 PF03553 Na+/H+ antiporter family G7042_15830 PF12464 Maltose acetyltransferase G7042_15830 PF14602 Hexapeptide repeat of succinyl-transferase G7042_15835 PF00128 Alpha amylase, catalytic domain G7042_15835 PF11941 Domain of unknown function (DUF3459) G7042_15840 PF00367 phosphotransferase system, EIIB G7042_15840 PF02378 Phosphotransferase system, EIIC G7042_15845 PF00356 Bacterial regulatory proteins, lacI family G7042_15855 PF02378 Phosphotransferase system, EIIC G7042_15860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit G7042_15865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit G7042_15865 PF02378 Phosphotransferase system, EIIC G7042_15870 PF00232 Glycosyl hydrolase family 1 G7042_15875 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit G7042_15880 PF00480 ROK family G7042_15890 PF00356 Bacterial regulatory proteins, lacI family G7042_15900 PF17763 Glutaminase/Asparaginase C-terminal domain G7042_15900 PF00710 Asparaginase, N-terminal G7042_15915 PF02142 MGS-like domain G7042_15925 PF00210 Ferritin-like domain G7042_15940 PF08351 Domain of unknown function (DUF1726) G7042_15940 PF13718 GNAT acetyltransferase 2 G7042_15940 PF05127 Helicase G7042_15940 PF17176 tRNA-binding domain G7042_15945 PF00106 short chain dehydrogenase G7042_15950 PF01584 CheW-like domain G7042_15950 PF00072 Response regulator receiver domain G7042_15960 PF07670 Nucleoside recognition G7042_15975 PF13358 DDE superfamily endonuclease G7042_15975 PF13592 Winged helix-turn helix G7042_16085 PF02660 Glycerol-3-phosphate acyltransferase G7042_16090 PF02152 Dihydroneopterin aldolase G7042_16095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) G7042_16110 PF07683 Cobalamin synthesis protein cobW C-terminal domain G7042_16110 PF02492 CobW/HypB/UreG, nucleotide-binding domain G7042_16120 PF01810 LysE type translocator G7042_16125 PF03466 LysR substrate binding domain G7042_16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_16130 PF03466 LysR substrate binding domain G7042_16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_16140 PF12792 CSS motif domain associated with EAL G7042_16140 PF00563 EAL domain G7042_16145 PF00330 Aconitase family (aconitate hydratase) G7042_16145 PF06434 Aconitate hydratase 2 N-terminus G7042_16145 PF11791 Aconitate B N-terminal domain G7042_16155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_16155 PF00672 HAMP domain G7042_16155 PF12729 Four helix bundle sensory module for signal transduction G7042_16160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_16160 PF00672 HAMP domain G7042_16160 PF12729 Four helix bundle sensory module for signal transduction G7042_16170 PF05231 MASE1 G7042_16170 PF08447 PAS fold G7042_16170 PF08448 PAS fold G7042_16170 PF00990 Diguanylate cyclase, GGDEF domain G7042_16170 PF00563 EAL domain G7042_16170 PF13426 PAS domain G7042_16175 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_16175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G7042_16180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) G7042_16180 PF00364 Biotin-requiring enzyme G7042_16180 PF02817 e3 binding domain G7042_16185 PF00456 Transketolase, thiamine diphosphate binding domain G7042_16185 PF17831 Pyruvate dehydrogenase E1 component middle domain G7042_16190 PF00392 Bacterial regulatory proteins, gntR family G7042_16190 PF07729 FCD domain G7042_16195 PF01510 N-acetylmuramoyl-L-alanine amidase G7042_16205 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain G7042_16205 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain G7042_16215 PF07963 Prokaryotic N-terminal methylation motif G7042_16230 PF00437 Type II/IV secretion system protein G7042_16230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain G7042_16240 PF06750 Bacterial Peptidase A24 N-terminal domain G7042_16240 PF01478 Type IV leader peptidase family G7042_16245 PF01121 Dephospho-CoA kinase G7042_16250 PF07072 Cell division protein G7042_16255 PF03884 DNA gyrase inhibitor YacG G7042_16260 PF00293 NUDIX domain G7042_16270 PF07516 SecA Wing and Scaffold domain G7042_16270 PF01043 SecA preprotein cross-linking domain G7042_16270 PF02810 SEC-C motif G7042_16270 PF07517 SecA DEAD-like domain G7042_16280 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase G7042_16285 PF00091 Tubulin/FtsZ family, GTPase domain G7042_16285 PF12327 FtsZ family, C-terminal domain G7042_16290 PF02491 SHS2 domain inserted in FTSA G7042_16295 PF03799 Cell division protein FtsQ G7042_16295 PF08478 POTRA domain, FtsQ-type G7042_16300 PF02875 Mur ligase family, glutamate ligase domain G7042_16300 PF08245 Mur ligase middle domain G7042_16300 PF01225 Mur ligase family, catalytic domain G7042_16305 PF03033 Glycosyltransferase family 28 N-terminal domain G7042_16305 PF04101 Glycosyltransferase family 28 C-terminal domain G7042_16310 PF01098 Cell cycle protein G7042_16315 PF08245 Mur ligase middle domain G7042_16315 PF02875 Mur ligase family, glutamate ligase domain G7042_16320 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 G7042_16320 PF00953 Glycosyl transferase family 4 G7042_16325 PF01225 Mur ligase family, catalytic domain G7042_16325 PF02875 Mur ligase family, glutamate ligase domain G7042_16325 PF08245 Mur ligase middle domain G7042_16330 PF08245 Mur ligase middle domain G7042_16330 PF02875 Mur ligase family, glutamate ligase domain G7042_16330 PF01225 Mur ligase family, catalytic domain G7042_16335 PF03717 Penicillin-binding Protein dimerisation domain G7042_16335 PF00905 Penicillin binding protein transpeptidase domain G7042_16340 PF04999 Cell division protein FtsL G7042_16345 PF01795 MraW methylase family G7042_16350 PF02381 MraZ protein, putative antitoxin-like G7042_16360 PF01464 Transglycosylase SLT domain G7042_16360 PF01476 LysM domain G7042_16365 PF00691 OmpA family G7042_16365 PF13677 Membrane MotB of proton-channel complex MotA/MotB G7042_16370 PF01618 MotA/TolQ/ExbB proton channel family G7042_16375 PF04545 Sigma-70, region 4 G7042_16375 PF04542 Sigma-70 region 2 G7042_16395 PF02561 Flagellar protein FliS G7042_16400 PF07196 Flagellin hook IN motif G7042_16400 PF07195 Flagellar hook-associated protein 2 C-terminus G7042_16400 PF02465 Flagellar hook-associated protein 2 N-terminus G7042_16405 PF00700 Bacterial flagellin C-terminal helical region G7042_16405 PF00669 Bacterial flagellin N-terminal helical region G7042_16435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_16435 PF00460 Flagella basal body rod protein G7042_16445 PF02119 Flagellar P-ring protein G7042_16450 PF02107 Flagellar L-ring protein G7042_16455 PF00460 Flagella basal body rod protein G7042_16455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_16460 PF00460 Flagella basal body rod protein G7042_16460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_16465 PF07559 Flagellar basal body protein FlaE G7042_16465 PF00460 Flagella basal body rod protein G7042_16465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_16475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal G7042_16475 PF00460 Flagella basal body rod protein G7042_16480 PF00460 Flagella basal body rod protein G7042_16490 PF04316 Anti-sigma-28 factor, FlgM G7042_16505 PF18269 T3SS EscN ATPase C-terminal domain G7042_16505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G7042_16515 PF01706 FliG C-terminal domain G7042_16515 PF14842 FliG N-terminal domain G7042_16515 PF14841 FliG middle domain G7042_16520 PF01514 Secretory protein of YscJ/FliF family G7042_16520 PF08345 Flagellar M-ring protein C-terminal G7042_16525 PF02049 Flagellar hook-basal body complex protein FliE G7042_16530 PF00158 Sigma-54 interaction domain G7042_16530 PF02954 Bacterial regulatory protein, Fis family G7042_16530 PF00072 Response regulator receiver domain G7042_16550 PF00436 Single-strand binding protein family G7042_16555 PF00196 Bacterial regulatory proteins, luxR family G7042_16560 PF17755 UvrA DNA-binding domain G7042_16560 PF17760 UvrA interaction domain G7042_16560 PF00005 ABC transporter G7042_16565 PF08448 PAS fold G7042_16565 PF00990 Diguanylate cyclase, GGDEF domain G7042_16570 PF00313 'Cold-shock' DNA-binding domain G7042_16580 PF00990 Diguanylate cyclase, GGDEF domain G7042_16600 PF00990 Diguanylate cyclase, GGDEF domain G7042_16600 PF00072 Response regulator receiver domain G7042_16605 PF00543 Nitrogen regulatory protein P-II G7042_16625 PF13808 DDE_Tnp_1-associated G7042_16625 PF01609 Transposase DDE domain G7042_16635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily G7042_16655 PF13538 UvrD-like helicase C-terminal domain G7042_16660 PF00580 UvrD/REP helicase N-terminal domain G7042_16660 PF12705 PD-(D/E)XK nuclease superfamily G7042_16660 PF13361 UvrD-like helicase C-terminal domain G7042_16665 PF17946 RecC C-terminal domain G7042_16670 PF07681 DoxX G7042_16675 PF17954 Quercetinase C-terminal cupin domain G7042_16675 PF02678 Pirin G7042_16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_16685 PF03466 LysR substrate binding domain G7042_16710 PF00528 Binding-protein-dependent transport system inner membrane component G7042_16720 PF08402 TOBE domain G7042_16720 PF00005 ABC transporter G7042_16730 PF00990 Diguanylate cyclase, GGDEF domain G7042_16750 PF00583 Acetyltransferase (GNAT) family G7042_16755 PF06628 Catalase-related immune-responsive G7042_16755 PF00199 Catalase G7042_16780 PF00293 NUDIX domain G7042_16785 PF01594 AI-2E family transporter G7042_16790 PF02954 Bacterial regulatory protein, Fis family G7042_16790 PF00158 Sigma-54 interaction domain G7042_16790 PF00989 PAS fold G7042_16795 PF00465 Iron-containing alcohol dehydrogenase G7042_16800 PF03610 PTS system fructose IIA component G7042_16800 PF05524 PEP-utilising enzyme, N-terminal G7042_16800 PF00391 PEP-utilising enzyme, mobile domain G7042_16800 PF00381 PTS HPr component phosphorylation site G7042_16805 PF02734 DAK2 domain G7042_16810 PF02733 Dak1 domain G7042_16815 PF00860 Permease family G7042_16865 PF01196 Ribosomal protein L17 G7042_16870 PF01000 RNA polymerase Rpb3/RpoA insert domain G7042_16870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain G7042_16870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain G7042_16875 PF01479 S4 domain G7042_16875 PF00163 Ribosomal protein S4/S9 N-terminal domain G7042_16880 PF00411 Ribosomal protein S11 G7042_16885 PF00416 Ribosomal protein S13/S18 G7042_16890 PF00444 Ribosomal protein L36 G7042_16895 PF00344 SecY translocase G7042_16900 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A G7042_16905 PF00327 Ribosomal protein L30p/L7e G7042_16910 PF03719 Ribosomal protein S5, C-terminal domain G7042_16910 PF00333 Ribosomal protein S5, N-terminal domain G7042_16915 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast G7042_16920 PF00347 Ribosomal protein L6 G7042_16925 PF00410 Ribosomal protein S8 G7042_16930 PF00253 Ribosomal protein S14p/S29e G7042_16935 PF00673 ribosomal L5P family C-terminus G7042_16935 PF00281 Ribosomal protein L5 G7042_16940 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 G7042_16945 PF00238 Ribosomal protein L14p/L23e G7042_16950 PF00366 Ribosomal protein S17 G7042_16955 PF00831 Ribosomal L29 protein G7042_16960 PF00252 Ribosomal protein L16p/L10e G7042_16965 PF00189 Ribosomal protein S3, C-terminal domain G7042_16965 PF07650 KH domain G7042_16970 PF00237 Ribosomal protein L22p/L17e G7042_16975 PF00203 Ribosomal protein S19 G7042_16980 PF00181 Ribosomal Proteins L2, RNA binding domain G7042_16980 PF03947 Ribosomal Proteins L2, C-terminal domain G7042_16985 PF00276 Ribosomal protein L23 G7042_16990 PF00573 Ribosomal protein L4/L1 family G7042_16995 PF00297 Ribosomal protein L3 G7042_17000 PF00338 Ribosomal protein S10p/S20e G7042_17010 PF00512 His Kinase A (phospho-acceptor) domain G7042_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_17010 PF00672 HAMP domain G7042_17015 PF00072 Response regulator receiver domain G7042_17015 PF00486 Transcriptional regulatory protein, C terminal G7042_17020 PF03449 Transcription elongation factor, N-terminal G7042_17020 PF01272 Transcription elongation factor, GreA/GreB, C-term G7042_17025 PF17674 HHH domain G7042_17025 PF09371 Tex-like protein N-terminal domain G7042_17025 PF00575 S1 RNA binding domain G7042_17025 PF16921 Tex protein YqgF-like domain G7042_17045 PF00561 alpha/beta hydrolase fold G7042_17050 PF00156 Phosphoribosyl transferase domain G7042_17055 PF01106 NifU-like domain G7042_17055 PF01521 Iron-sulphur cluster biosynthesis G7042_17060 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus G7042_17060 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus G7042_17065 PF02556 Preprotein translocase subunit SecB G7042_17070 PF00581 Rhodanese-like domain G7042_17075 PF06415 BPG-independent PGAM N-terminus (iPGM_N) G7042_17075 PF01676 Metalloenzyme superfamily G7042_17080 PF01551 Peptidase family M23 G7042_17090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family G7042_17090 PF00356 Bacterial regulatory proteins, lacI family G7042_17095 PF01081 KDPG and KHG aldolase G7042_17100 PF00920 Dehydratase family G7042_17105 PF01202 Shikimate kinase G7042_17110 PF02447 GntP family permease G7042_17115 PF13091 PLD-like domain G7042_17120 PF00270 DEAD/DEAH box helicase G7042_17120 PF00271 Helicase conserved C-terminal domain G7042_17120 PF17191 RecG wedge domain G7042_17130 PF09500 Putative thioesterase (yiiD_Cterm) G7042_17130 PF00583 Acetyltransferase (GNAT) family G7042_17140 PF02580 D-Tyr-tRNA(Tyr) deacylase G7042_17145 PF03631 Virulence factor BrkB G7042_17150 PF03144 Elongation factor Tu domain 2 G7042_17150 PF00679 Elongation factor G C-terminus G7042_17150 PF00009 Elongation factor Tu GTP binding domain G7042_17155 PF03951 Glutamine synthetase, beta-Grasp domain G7042_17155 PF00120 Glutamine synthetase, catalytic domain G7042_17165 PF00989 PAS fold G7042_17165 PF00512 His Kinase A (phospho-acceptor) domain G7042_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_17170 PF02954 Bacterial regulatory protein, Fis family G7042_17170 PF00072 Response regulator receiver domain G7042_17170 PF00158 Sigma-54 interaction domain G7042_17175 PF00962 Adenosine/AMP deaminase G7042_17180 PF04055 Radical SAM superfamily G7042_17180 PF06969 HemN C-terminal domain G7042_17185 PF10675 Protein of unknown function (DUF2489) G7042_17190 PF04220 Der GTPase activator (YihI) G7042_17195 PF00034 Cytochrome c G7042_17200 PF01926 50S ribosome-binding GTPase G7042_17205 PF07369 Protein of unknown function (DUF1488) G7042_17210 PF08501 Shikimate dehydrogenase substrate binding domain G7042_17210 PF01488 Shikimate / quinate 5-dehydrogenase G7042_17210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain G7042_17215 PF01218 Coproporphyrinogen III oxidase G7042_17220 PF01300 Telomere recombination G7042_17225 PF00731 AIR carboxylase G7042_17230 PF01396 Topoisomerase DNA binding C4 zinc finger G7042_17235 PF04361 Protein of unknown function (DUF494) G7042_17240 PF17782 DprA winged helix domain G7042_17240 PF02481 DNA recombination-mediator protein A G7042_17245 PF01476 LysM domain G7042_17250 PF01327 Polypeptide deformylase G7042_17255 PF00551 Formyl transferase G7042_17255 PF02911 Formyl transferase, C-terminal domain G7042_17260 PF01029 NusB family G7042_17260 PF01189 16S rRNA methyltransferase RsmB/F G7042_17265 PF02080 TrkA-C domain G7042_17265 PF02254 TrkA-N domain G7042_17270 PF02386 Cation transport protein G7042_17275 PF02646 RmuC family G7042_17290 PF02082 Transcriptional regulator G7042_17295 PF00294 pfkB family carbohydrate kinase G7042_17300 PF01262 Alanine dehydrogenase/PNT, C-terminal domain G7042_17300 PF05222 Alanine dehydrogenase/PNT, N-terminal domain G7042_17305 PF02540 NAD synthase G7042_17305 PF00958 GMP synthase C terminal domain G7042_17305 PF00117 Glutamine amidotransferase class-I G7042_17310 PF00171 Aldehyde dehydrogenase family G7042_17315 PF00202 Aminotransferase class-III G7042_17320 PF01381 Helix-turn-helix G7042_17325 PF00171 Aldehyde dehydrogenase family G7042_17335 PF00892 EamA-like transporter family G7042_17340 PF12833 Helix-turn-helix domain G7042_17345 PF01810 LysE type translocator G7042_17350 PF00689 Cation transporting ATPase, C-terminus G7042_17350 PF00690 Cation transporter/ATPase, N-terminus G7042_17360 PF13806 Rieske-like [2Fe-2S] domain G7042_17365 PF01226 Formate/nitrite transporter G7042_17370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases G7042_17370 PF14824 Sirohaem biosynthesis protein central G7042_17370 PF10414 Sirohaem synthase dimerisation region G7042_17375 PF03448 MgtE intracellular N domain G7042_17375 PF01769 Divalent cation transporter G7042_17375 PF00571 CBS domain G7042_17380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_17380 PF00672 HAMP domain G7042_17385 PF03737 Aldolase/RraA G7042_17390 PF02592 Putative vitamin uptake transporter G7042_17400 PF02696 Uncharacterized ACR, YdiU/UPF0061 family G7042_17405 PF00034 Cytochrome c G7042_17410 PF00570 HRDC domain G7042_17410 PF00270 DEAD/DEAH box helicase G7042_17410 PF09382 RQC domain G7042_17410 PF16124 RecQ zinc-binding G7042_17410 PF00271 Helicase conserved C-terminal domain G7042_17415 PF03061 Thioesterase superfamily G7042_17430 PF03475 3-alpha domain G7042_17430 PF03473 MOSC domain G7042_17435 PF00528 Binding-protein-dependent transport system inner membrane component G7042_17440 PF00528 Binding-protein-dependent transport system inner membrane component G7042_17445 PF08402 TOBE domain G7042_17445 PF00005 ABC transporter G7042_17450 PF13416 Bacterial extracellular solute-binding protein G7042_17455 PF13416 Bacterial extracellular solute-binding protein G7042_17460 PF00202 Aminotransferase class-III G7042_17465 PF00120 Glutamine synthetase, catalytic domain G7042_17470 PF01258 Prokaryotic dksA/traR C4-type zinc finger G7042_17485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain G7042_17485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain G7042_17490 PF00012 Hsp70 protein G7042_17505 PF00128 Alpha amylase, catalytic domain G7042_17505 PF02903 Alpha amylase, N-terminal ig-like domain G7042_17510 PF02719 Polysaccharide biosynthesis protein G7042_17515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family G7042_17540 PF13193 AMP-binding enzyme C-terminal domain G7042_17540 PF00501 AMP-binding enzyme G7042_17560 PF02348 Cytidylyltransferase G7042_17570 PF08666 SAF domain G7042_17570 PF03102 NeuB family G7042_17605 PF13808 DDE_Tnp_1-associated G7042_17605 PF01609 Transposase DDE domain G7042_17615 PF09940 Domain of unknown function (DUF2172) G7042_17615 PF16254 Domain of unknown function (DUF4910) G7042_17615 PF16221 winged helix-turn-helix G7042_17650 PF05958 tRNA (Uracil-5-)-methyltransferase G7042_17655 PF00072 Response regulator receiver domain G7042_17655 PF00486 Transcriptional regulatory protein, C terminal G7042_17660 PF00512 His Kinase A (phospho-acceptor) domain G7042_17660 PF00672 HAMP domain G7042_17660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_17670 PF03949 Malic enzyme, NAD binding domain G7042_17670 PF00390 Malic enzyme, N-terminal domain G7042_17675 PF13460 NAD(P)H-binding G7042_17675 PF11066 Protein of unknown function (DUF2867) G7042_17680 PF01197 Ribosomal protein L31 G7042_17685 PF18319 PriA DNA helicase Cys-rich region (CRR) domain G7042_17685 PF00270 DEAD/DEAH box helicase G7042_17685 PF00271 Helicase conserved C-terminal domain G7042_17685 PF18074 Primosomal protein N C-terminal domain G7042_17685 PF17764 3′ DNA-binding domain (3′BD) G7042_17695 PF00440 Bacterial regulatory proteins, tetR family G7042_17705 PF00691 OmpA family G7042_17705 PF01389 OmpA-like transmembrane domain G7042_17710 PF00291 Pyridoxal-phosphate dependent enzyme G7042_17710 PF00585 C-terminal regulatory domain of Threonine dehydratase G7042_17715 PF00920 Dehydratase family G7042_17720 PF01063 Amino-transferase class IV G7042_17730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G7042_17730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain G7042_17730 PF00205 Thiamine pyrophosphate enzyme, central domain G7042_17735 PF13335 Magnesium chelatase, subunit ChlI C-terminal G7042_17735 PF01078 Magnesium chelatase, subunit ChlI G7042_17745 PF04463 Protein of unknown function (DUF523) G7042_17755 PF00857 Isochorismatase family G7042_17760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain G7042_17760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family G7042_17770 PF00005 ABC transporter G7042_17775 PF00528 Binding-protein-dependent transport system inner membrane component G7042_17780 PF01323 DSBA-like thioredoxin domain G7042_17785 PF01636 Phosphotransferase enzyme family G7042_17790 PF12801 4Fe-4S binding domain G7042_17790 PF13746 4Fe-4S dicluster domain G7042_17790 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase G7042_17795 PF06288 Protein of unknown function (DUF1040) G7042_17800 PF01590 GAF domain G7042_17800 PF00563 EAL domain G7042_17800 PF00990 Diguanylate cyclase, GGDEF domain G7042_17800 PF00360 Phytochrome region G7042_17805 PF13411 MerR HTH family regulatory protein G7042_17810 PF00403 Heavy-metal-associated domain G7042_17815 PF00156 Phosphoribosyl transferase domain G7042_17820 PF03725 3' exoribonuclease family, domain 2 G7042_17820 PF01138 3' exoribonuclease family, domain 1 G7042_17825 PF03755 YicC-like family, N-terminal region G7042_17825 PF08340 Domain of unknown function (DUF1732) G7042_17840 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) G7042_17860 PF01370 NAD dependent epimerase/dehydratase family G7042_17865 PF08360 QacR-like protein, C-terminal region G7042_17865 PF00440 Bacterial regulatory proteins, tetR family G7042_17870 PF00155 Aminotransferase class I and II G7042_17875 PF00107 Zinc-binding dehydrogenase G7042_17875 PF08240 Alcohol dehydrogenase GroES-like domain G7042_17890 PF00580 UvrD/REP helicase N-terminal domain G7042_17890 PF13361 UvrD-like helicase C-terminal domain G7042_17895 PF00266 Aminotransferase class-V G7042_17900 PF02657 Fe-S metabolism associated domain G7042_17905 PF00899 ThiF family G7042_17935 PF12724 Flavodoxin domain G7042_17940 PF02386 Cation transport protein G7042_17945 PF09186 Domain of unknown function (DUF1949) G7042_17945 PF01205 Uncharacterized protein family UPF0029 G7042_17950 PF00557 Metallopeptidase family M24 G7042_17955 PF00501 AMP-binding enzyme G7042_17955 PF13193 AMP-binding enzyme C-terminal domain G7042_17960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain G7042_17960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain G7042_17960 PF00378 Enoyl-CoA hydratase/isomerase G7042_17965 PF00108 Thiolase, N-terminal domain G7042_17965 PF02803 Thiolase, C-terminal domain G7042_17970 PF00072 Response regulator receiver domain G7042_17970 PF00486 Transcriptional regulatory protein, C terminal G7042_17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_17975 PF00512 His Kinase A (phospho-acceptor) domain G7042_17975 PF00672 HAMP domain G7042_17980 PF01547 Bacterial extracellular solute-binding protein G7042_17990 PF01206 Sulfurtransferase TusA G7042_17995 PF01042 Endoribonuclease L-PSP G7042_18000 PF00691 OmpA family G7042_18000 PF13488 Glycine zipper G7042_18010 PF02091 Glycyl-tRNA synthetase alpha subunit G7042_18015 PF05746 DALR anticodon binding domain G7042_18015 PF02092 Glycyl-tRNA synthetase beta subunit G7042_18020 PF11008 Protein of unknown function (DUF2846) G7042_18035 PF00392 Bacterial regulatory proteins, gntR family G7042_18035 PF07702 UTRA domain G7042_18040 PF01590 GAF domain G7042_18040 PF00158 Sigma-54 interaction domain G7042_18050 PF18113 Rubredoxin binding C-terminal domain G7042_18050 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_18060 PF12801 4Fe-4S binding domain G7042_18065 PF03222 Tryptophan/tyrosine permease family G7042_18070 PF05932 Tir chaperone protein (CesT) family G7042_18080 PF00563 EAL domain G7042_18080 PF13426 PAS domain G7042_18080 PF00990 Diguanylate cyclase, GGDEF domain G7042_18100 PF00102 Protein-tyrosine phosphatase G7042_18100 PF09013 YopH, N-terminal G7042_18110 PF01609 Transposase DDE domain G7042_18115 PF00872 Transposase, Mutator family G7042_18140 PF13737 Transposase DDE domain G7042_18150 PF11975 Family 4 glycosyl hydrolase C-terminal domain G7042_18150 PF02056 Family 4 glycosyl hydrolase G7042_18155 PF00356 Bacterial regulatory proteins, lacI family G7042_18160 PF13458 Periplasmic binding protein G7042_18165 PF02653 Branched-chain amino acid transport system / permease component G7042_18170 PF11862 Domain of unknown function (DUF3382) G7042_18170 PF02653 Branched-chain amino acid transport system / permease component G7042_18175 PF00005 ABC transporter G7042_18175 PF12399 Branched-chain amino acid ATP-binding cassette transporter G7042_18180 PF00005 ABC transporter G7042_18190 PF01810 LysE type translocator G7042_18195 PF00581 Rhodanese-like domain G7042_18200 PF01694 Rhomboid family G7042_18200 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease G7042_18205 PF12262 Bacterial virulence factor lipase N-terminal G7042_18210 PF04380 Membrane fusogenic activity G7042_18215 PF00175 Oxidoreductase NAD-binding domain G7042_18220 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase G7042_18230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G7042_18230 PF07497 Rho termination factor, RNA-binding domain G7042_18230 PF07498 Rho termination factor, N-terminal domain G7042_18235 PF00085 Thioredoxin G7042_18240 PF00271 Helicase conserved C-terminal domain G7042_18240 PF00270 DEAD/DEAH box helicase G7042_18245 PF02541 Ppx/GppA phosphatase family G7042_18255 PF04445 Putative SAM-dependent methyltransferase G7042_18260 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_18265 PF03707 Bacterial signalling protein N terminal repeat G7042_18265 PF00563 EAL domain G7042_18265 PF00990 Diguanylate cyclase, GGDEF domain G7042_18270 PF01432 Peptidase family M3 G7042_18275 PF00490 Delta-aminolevulinic acid dehydratase G7042_18280 PF01026 TatD related DNase G7042_18285 PF00902 Sec-independent protein translocase protein (TatC) G7042_18290 PF02416 mttA/Hcf106 family G7042_18295 PF02416 mttA/Hcf106 family G7042_18300 PF03109 ABC1 family G7042_18305 PF02036 SCP-2 sterol transfer family G7042_18310 PF01209 ubiE/COQ5 methyltransferase family G7042_18315 PF02537 CrcB-like protein, Camphor Resistance (CrcB) G7042_18320 PF07969 Amidohydrolase family G7042_18360 PF03544 Gram-negative bacterial TonB protein C-terminal G7042_18365 PF02472 Biopolymer transport protein ExbD/TolR G7042_18370 PF01618 MotA/TolQ/ExbB proton channel family G7042_18375 PF01618 MotA/TolQ/ExbB proton channel family G7042_18385 PF00196 Bacterial regulatory proteins, luxR family G7042_18385 PF03472 Autoinducer binding domain G7042_18390 PF01380 SIS domain G7042_18395 PF08220 DeoR-like helix-turn-helix domain G7042_18395 PF00455 DeoR C terminal sensor domain G7042_18400 PF00486 Transcriptional regulatory protein, C terminal G7042_18400 PF00072 Response regulator receiver domain G7042_18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_18405 PF00672 HAMP domain G7042_18405 PF00512 His Kinase A (phospho-acceptor) domain G7042_18410 PF00905 Penicillin binding protein transpeptidase domain G7042_18415 PF06123 Inner membrane protein CreD G7042_18420 PF14602 Hexapeptide repeat of succinyl-transferase G7042_18420 PF00132 Bacterial transferase hexapeptide (six repeats) G7042_18420 PF12804 MobA-like NTP transferase domain G7042_18425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain G7042_18425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain G7042_18430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G7042_18430 PF02874 ATP synthase alpha/beta family, beta-barrel domain G7042_18435 PF00231 ATP synthase G7042_18440 PF00306 ATP synthase alpha/beta chain, C terminal domain G7042_18440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G7042_18440 PF02874 ATP synthase alpha/beta family, beta-barrel domain G7042_18445 PF00213 ATP synthase delta (OSCP) subunit G7042_18450 PF00430 ATP synthase B/B' CF(0) G7042_18455 PF00137 ATP synthase subunit C G7042_18460 PF00119 ATP synthase A chain G7042_18465 PF03899 ATP synthase I chain G7042_18470 PF02195 ParB-like nuclease domain G7042_18470 PF17762 HTH domain found in ParB protein G7042_18475 PF13614 AAA domain G7042_18480 PF02527 rRNA small subunit methyltransferase G G7042_18485 PF13932 GidA associated domain G7042_18485 PF01134 Glucose inhibited division protein A G7042_18490 PF00258 Flavodoxin G7042_18495 PF00593 TonB dependent receptor G7042_18495 PF07715 TonB-dependent Receptor Plug Domain G7042_18500 PF00005 ABC transporter G7042_18505 PF00005 ABC transporter G7042_18510 PF01497 Periplasmic binding protein G7042_18515 PF01032 FecCD transport family G7042_18520 PF00593 TonB dependent receptor G7042_18520 PF07715 TonB-dependent Receptor Plug Domain G7042_18525 PF01497 Periplasmic binding protein G7042_18530 PF00005 ABC transporter G7042_18535 PF01032 FecCD transport family G7042_18540 PF01032 FecCD transport family G7042_18545 PF00005 ABC transporter G7042_18550 PF08021 Siderophore-interacting FAD-binding domain G7042_18550 PF00664 ABC transporter transmembrane region G7042_18550 PF04954 Siderophore-interacting protein G7042_18550 PF00005 ABC transporter G7042_18560 PF00975 Thioesterase domain G7042_18560 PF00550 Phosphopantetheine attachment site G7042_18560 PF00668 Condensation domain G7042_18560 PF13193 AMP-binding enzyme C-terminal domain G7042_18560 PF00501 AMP-binding enzyme G7042_18565 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) G7042_18570 PF00668 Condensation domain G7042_18570 PF00550 Phosphopantetheine attachment site G7042_18570 PF00501 AMP-binding enzyme G7042_18580 PF00282 Pyridoxal-dependent decarboxylase conserved domain G7042_18585 PF10396 GTP-binding protein TrmE N-terminus G7042_18585 PF12631 MnmE helical domain G7042_18585 PF01926 50S ribosome-binding GTPase G7042_18590 PF14849 YidC periplasmic domain G7042_18590 PF02096 60Kd inner membrane protein G7042_18595 PF01809 Putative membrane protein insertion efficiency factor G7042_18600 PF00825 Ribonuclease P G7042_18605 PF00468 Ribosomal protein L34 G7042_18610 PF00005 ABC transporter G7042_18615 PF00528 Binding-protein-dependent transport system inner membrane component G7042_18620 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_18625 PF11638 DnaA N-terminal domain G7042_18625 PF08299 Bacterial dnaA protein helix-turn-helix G7042_18625 PF00308 Bacterial dnaA protein G7042_18630 PF02768 DNA polymerase III beta subunit, C-terminal domain G7042_18630 PF02767 DNA polymerase III beta subunit, central domain G7042_18630 PF00712 DNA polymerase III beta subunit, N-terminal domain G7042_18635 PF02463 RecF/RecN/SMC N terminal domain G7042_18640 PF18053 DNA gyrase B subunit insert domain G7042_18640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_18640 PF01751 Toprim domain G7042_18640 PF00204 DNA gyrase B G7042_18640 PF00986 DNA gyrase B subunit, carboxyl terminus G7042_18655 PF08279 HTH domain G7042_18655 PF13280 WYL domain G7042_18660 PF00011 Hsp20/alpha crystallin family G7042_18665 PF00011 Hsp20/alpha crystallin family G7042_18680 PF00155 Aminotransferase class I and II G7042_18695 PF07690 Major Facilitator Superfamily G7042_18705 PF00072 Response regulator receiver domain G7042_18705 PF00486 Transcriptional regulatory protein, C terminal G7042_18710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_18710 PF00512 His Kinase A (phospho-acceptor) domain G7042_18710 PF02702 Osmosensitive K+ channel His kinase sensor domain G7042_18710 PF13492 GAF domain G7042_18710 PF13493 Domain of unknown function (DUF4118) G7042_18715 PF02669 K+-transporting ATPase, c chain G7042_18725 PF03814 Potassium-transporting ATPase A subunit G7042_18730 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_18730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G7042_18735 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_18735 PF00512 His Kinase A (phospho-acceptor) domain G7042_18735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_18740 PF00873 AcrB/AcrD/AcrF family G7042_18745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G7042_18750 PF00440 Bacterial regulatory proteins, tetR family G7042_18785 PF12146 Serine aminopeptidase, S33 G7042_18790 PF00588 SpoU rRNA Methylase family G7042_18790 PF12105 SpoU, rRNA methylase, C-terminal G7042_18795 PF04607 Region found in RelA / SpoT proteins G7042_18795 PF13291 ACT domain G7042_18795 PF02824 TGS domain G7042_18800 PF01192 RNA polymerase Rpb6 G7042_18805 PF00625 Guanylate kinase G7042_18810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) G7042_18825 PF00892 EamA-like transporter family G7042_18845 PF03466 LysR substrate binding domain G7042_18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_18850 PF00579 tRNA synthetases class I (W and Y) G7042_18855 PF00582 Universal stress protein family G7042_18860 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase G7042_18860 PF07055 Enoyl reductase FAD binding domain G7042_18860 PF12241 Trans-2-enoyl-CoA reductase catalytic region G7042_18870 PF00210 Ferritin-like domain G7042_18880 PF01810 LysE type translocator G7042_18925 PF01609 Transposase DDE domain G7042_18925 PF13808 DDE_Tnp_1-associated G7042_18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_18930 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_18930 PF00072 Response regulator receiver domain G7042_18930 PF00989 PAS fold G7042_18930 PF01627 Hpt domain G7042_18930 PF00512 His Kinase A (phospho-acceptor) domain G7042_18940 PF01627 Hpt domain G7042_18940 PF00989 PAS fold G7042_18940 PF00072 Response regulator receiver domain G7042_18940 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_18940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_18940 PF00512 His Kinase A (phospho-acceptor) domain G7042_18950 PF06580 Histidine kinase G7042_18950 PF07694 5TMR of 5TMR-LYT G7042_18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_18955 PF00072 Response regulator receiver domain G7042_18955 PF04397 LytTr DNA-binding domain G7042_18960 PF07690 Major Facilitator Superfamily G7042_18965 PF02222 ATP-grasp domain G7042_18965 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain G7042_18970 PF00731 AIR carboxylase G7042_18985 PF03466 LysR substrate binding domain G7042_18985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_18990 PF00593 TonB dependent receptor G7042_18990 PF07715 TonB-dependent Receptor Plug Domain G7042_18995 PF01177 Asp/Glu/Hydantoin racemase G7042_19025 PF13607 Succinyl-CoA ligase like flavodoxin domain G7042_19025 PF13380 CoA binding domain G7042_19025 PF00583 Acetyltransferase (GNAT) family G7042_19040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_19040 PF03466 LysR substrate binding domain G7042_19045 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain G7042_19045 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain G7042_19050 PF00342 Phosphoglucose isomerase G7042_19060 PF05552 Conserved TM helix G7042_19060 PF00924 Mechanosensitive ion channel G7042_19065 PF00440 Bacterial regulatory proteins, tetR family G7042_19070 PF00692 dUTPase G7042_19075 PF04127 DNA / pantothenate metabolism flavoprotein G7042_19075 PF02441 Flavoprotein G7042_19080 PF04002 RadC-like JAB domain G7042_19085 PF00830 Ribosomal L28 family G7042_19090 PF00471 Ribosomal protein L33 G7042_19100 PF06827 Zinc finger found in FPG and IleRS G7042_19100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain G7042_19100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain G7042_19105 PF04393 Protein of unknown function (DUF535) G7042_19110 PF01467 Cytidylyltransferase-like G7042_19115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) G7042_19120 PF00535 Glycosyl transferase family 2 G7042_19125 PF01075 Glycosyltransferase family 9 (heptosyltransferase) G7042_19130 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) G7042_19135 PF03611 PTS system sugar-specific permease component G7042_19145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 G7042_19150 PF00356 Bacterial regulatory proteins, lacI family G7042_19150 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family G7042_19180 PF03748 Flagellar basal body-associated protein FliL G7042_19185 PF04345 Chorismate lyase G7042_19190 PF01040 UbiA prenyltransferase family G7042_19195 PF01553 Acyltransferase G7042_19200 PF00717 Peptidase S24-like G7042_19200 PF01726 LexA DNA binding domain G7042_19210 PF02630 SCO1/SenC G7042_19215 PF01554 MatE G7042_19220 PF00588 SpoU rRNA Methylase family G7042_19225 PF00672 HAMP domain G7042_19225 PF00512 His Kinase A (phospho-acceptor) domain G7042_19225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_19225 PF16527 Two-component sensor protein CpxA, periplasmic domain G7042_19230 PF00072 Response regulator receiver domain G7042_19230 PF00486 Transcriptional regulatory protein, C terminal G7042_19235 PF16916 Dimerisation domain of Zinc Transporter G7042_19235 PF01545 Cation efflux family G7042_19240 PF06426 Serine acetyltransferase, N-terminal G7042_19240 PF00132 Bacterial transferase hexapeptide (six repeats) G7042_19250 PF06005 Cell division protein ZapB G7042_19260 PF01612 3'-5' exonuclease G7042_19260 PF01367 5'-3' exonuclease, C-terminal SAM fold G7042_19260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain G7042_19260 PF00476 DNA polymerase family A G7042_19265 PF00132 Bacterial transferase hexapeptide (six repeats) G7042_19315 PF00356 Bacterial regulatory proteins, lacI family G7042_19320 PF13593 SBF-like CPA transporter family (DUF4137) G7042_19325 PF12867 DinB superfamily G7042_19325 PF03781 Sulfatase-modifying factor enzyme 1 G7042_19335 PF00756 Putative esterase G7042_19340 PF00107 Zinc-binding dehydrogenase G7042_19340 PF08240 Alcohol dehydrogenase GroES-like domain G7042_19345 PF03466 LysR substrate binding domain G7042_19345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_19350 PF02653 Branched-chain amino acid transport system / permease component G7042_19355 PF02653 Branched-chain amino acid transport system / permease component G7042_19360 PF00005 ABC transporter G7042_19365 PF02608 ABC transporter substrate-binding protein PnrA-like G7042_19370 PF13361 UvrD-like helicase C-terminal domain G7042_19370 PF00580 UvrD/REP helicase N-terminal domain G7042_19410 PF04143 Sulphur transport G7042_19415 PF01609 Transposase DDE domain G7042_19415 PF13808 DDE_Tnp_1-associated G7042_19425 PF04324 BFD-like [2Fe-2S] binding domain G7042_19425 PF18267 Rubredoxin NAD+ reductase C-terminal domain G7042_19425 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_19425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain G7042_19425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain G7042_19430 PF03466 LysR substrate binding domain G7042_19430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_19435 PF07690 Major Facilitator Superfamily G7042_19440 PF10431 C-terminal, D2-small domain, of ClpB protein G7042_19440 PF07724 AAA domain (Cdc48 subfamily) G7042_19440 PF00004 ATPase family associated with various cellular activities (AAA) G7042_19445 PF00227 Proteasome subunit G7042_19455 PF03485 Arginyl tRNA synthetase N terminal domain G7042_19455 PF05746 DALR anticodon binding domain G7042_19455 PF00750 tRNA synthetases class I (R) G7042_19465 PF04545 Sigma-70, region 4 G7042_19465 PF04542 Sigma-70 region 2 G7042_19475 PF02673 Bacitracin resistance protein BacA G7042_19480 PF00248 Aldo/keto reductase family G7042_19485 PF01263 Aldose 1-epimerase G7042_19490 PF08544 GHMP kinases C terminal G7042_19490 PF10509 Galactokinase galactose-binding signature G7042_19490 PF00288 GHMP kinases N terminal domain G7042_19495 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain G7042_19495 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain G7042_19500 PF16363 GDP-mannose 4,6 dehydratase G7042_19505 PF00356 Bacterial regulatory proteins, lacI family G7042_19510 PF00703 Glycosyl hydrolases family 2 G7042_19510 PF02836 Glycosyl hydrolases family 2, TIM barrel domain G7042_19510 PF02837 Glycosyl hydrolases family 2, sugar binding domain G7042_19510 PF02929 Beta galactosidase small chain G7042_19510 PF16353 Domain of unknown function(DUF4981) G7042_19515 PF13407 Periplasmic binding protein domain G7042_19520 PF00005 ABC transporter G7042_19525 PF02653 Branched-chain amino acid transport system / permease component G7042_19530 PF02743 Cache domain G7042_19530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_19530 PF00672 HAMP domain G7042_19535 PF00872 Transposase, Mutator family G7042_19555 PF13358 DDE superfamily endonuclease G7042_19555 PF13592 Winged helix-turn helix G7042_19565 PF00696 Amino acid kinase family G7042_19570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain G7042_19570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain G7042_19575 PF03606 C4-dicarboxylate anaerobic carrier G7042_19580 PF02863 Arginine repressor, C-terminal domain G7042_19580 PF01316 Arginine repressor, DNA binding domain G7042_19585 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain G7042_19585 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain G7042_19590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain G7042_19590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain G7042_19610 PF02666 Phosphatidylserine decarboxylase G7042_19615 PF02743 Cache domain G7042_19615 PF00672 HAMP domain G7042_19615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_19620 PF08212 Lipocalin-like domain G7042_19630 PF00465 Iron-containing alcohol dehydrogenase G7042_19635 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch G7042_19635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain G7042_19635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain G7042_19640 PF02233 NAD(P) transhydrogenase beta subunit G7042_19650 PF13309 HTH domain G7042_19650 PF08348 YheO-like PAS domain G7042_19655 PF03313 Serine dehydratase alpha chain G7042_19660 PF00375 Sodium:dicarboxylate symporter family G7042_19665 PF07992 Pyridine nucleotide-disulphide oxidoreductase G7042_19665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain G7042_19670 PF13525 Outer membrane lipoprotein G7042_19675 PF00849 RNA pseudouridylate synthase G7042_19675 PF01479 S4 domain G7042_19680 PF02578 Multi-copper polyphenol oxidoreductase laccase G7042_19685 PF07724 AAA domain (Cdc48 subfamily) G7042_19685 PF17871 AAA lid domain G7042_19685 PF02861 Clp amino terminal domain, pathogenicity island component G7042_19685 PF10431 C-terminal, D2-small domain, of ClpB protein G7042_19685 PF00004 ATPase family associated with various cellular activities (AAA) G7042_19690 PF03590 Aspartate-ammonia ligase G7042_19695 PF01037 Lrp/AsnC ligand binding domain G7042_19705 PF10063 Uncharacterized integral membrane protein (DUF2301) G7042_19710 PF02272 DHHA1 domain G7042_19710 PF01743 Poly A polymerase head domain G7042_19710 PF01368 DHH family G7042_19710 PF00571 CBS domain G7042_19730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_19730 PF00512 His Kinase A (phospho-acceptor) domain G7042_19740 PF00158 Sigma-54 interaction domain G7042_19740 PF00072 Response regulator receiver domain G7042_19745 PF06496 Protein of unknown function (DUF1097) G7042_19750 PF00174 Oxidoreductase molybdopterin binding domain G7042_19755 PF01794 Ferric reductase like transmembrane component G7042_19770 PF00486 Transcriptional regulatory protein, C terminal G7042_19770 PF00072 Response regulator receiver domain G7042_19775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_19785 PF00384 Molybdopterin oxidoreductase G7042_19785 PF18364 Molybdopterin oxidoreductase N-terminal domain G7042_19785 PF01568 Molydopterin dinucleotide binding domain G7042_19790 PF03264 NapC/NirT cytochrome c family, N-terminal region G7042_19795 PF01751 Toprim domain G7042_19795 PF01131 DNA topoisomerase G7042_19800 PF02386 Cation transport protein G7042_19805 PF02254 TrkA-N domain G7042_19805 PF02080 TrkA-C domain G7042_19810 PF01565 FAD binding domain G7042_19810 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain G7042_19815 PF03099 Biotin/lipoate A/B protein ligase family G7042_19815 PF02237 Biotin protein ligase C terminal domain G7042_19815 PF08279 HTH domain G7042_19820 PF00485 Phosphoribulokinase / Uridine kinase family G7042_19835 PF03144 Elongation factor Tu domain 2 G7042_19835 PF00009 Elongation factor Tu GTP binding domain G7042_19835 PF03143 Elongation factor Tu C-terminal domain G7042_19845 PF00584 SecE/Sec61-gamma subunits of protein translocation complex G7042_19850 PF02357 Transcription termination factor nusG G7042_19850 PF00467 KOW motif G7042_19855 PF03946 Ribosomal protein L11, N-terminal domain G7042_19855 PF00298 Ribosomal protein L11, RNA binding domain G7042_19860 PF00687 Ribosomal protein L1p/L10e family G7042_19865 PF00466 Ribosomal protein L10 G7042_19870 PF00542 Ribosomal protein L7/L12 C-terminal domain G7042_19870 PF16320 Ribosomal protein L7/L12 dimerisation domain G7042_19875 PF04560 RNA polymerase Rpb2, domain 7 G7042_19875 PF04563 RNA polymerase beta subunit G7042_19875 PF04561 RNA polymerase Rpb2, domain 2 G7042_19875 PF04565 RNA polymerase Rpb2, domain 3 G7042_19875 PF10385 RNA polymerase beta subunit external 1 domain G7042_19875 PF00562 RNA polymerase Rpb2, domain 6 G7042_19880 PF00623 RNA polymerase Rpb1, domain 2 G7042_19880 PF04997 RNA polymerase Rpb1, domain 1 G7042_19880 PF04998 RNA polymerase Rpb1, domain 5 G7042_19880 PF05000 RNA polymerase Rpb1, domain 4 G7042_19880 PF04983 RNA polymerase Rpb1, domain 3 G7042_19885 PF13309 HTH domain G7042_19885 PF08348 YheO-like PAS domain G7042_19890 PF01042 Endoribonuclease L-PSP G7042_19895 PF02635 DsrE/DsrF-like family G7042_19900 PF02635 DsrE/DsrF-like family G7042_19905 PF04077 DsrH like protein G7042_19910 PF00164 Ribosomal protein S12/S23 G7042_19915 PF00177 Ribosomal protein S7p/S5e G7042_19920 PF03764 Elongation factor G, domain IV G7042_19920 PF14492 Elongation Factor G, domain II G7042_19920 PF03144 Elongation factor Tu domain 2 G7042_19920 PF00679 Elongation factor G C-terminus G7042_19920 PF00009 Elongation factor Tu GTP binding domain G7042_19925 PF03143 Elongation factor Tu C-terminal domain G7042_19925 PF00009 Elongation factor Tu GTP binding domain G7042_19925 PF03144 Elongation factor Tu domain 2 G7042_19990 PF03922 OmpW family G7042_20010 PF02219 Methylenetetrahydrofolate reductase G7042_20020 PF03594 Benzoate membrane transport protein G7042_20025 PF07883 Cupin domain G7042_20025 PF01381 Helix-turn-helix G7042_20055 PF04363 Protein of unknown function (DUF496) G7042_20065 PF04751 Protein of unknown function (DUF615) G7042_20070 PF01523 Putative modulator of DNA gyrase G7042_20075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) G7042_20080 PF01722 BolA-like protein G7042_20090 PF05494 MlaC protein G7042_20095 PF02470 MlaD protein G7042_20100 PF02405 Permease MlaE G7042_20105 PF00005 ABC transporter G7042_20110 PF00571 CBS domain G7042_20110 PF01380 SIS domain G7042_20120 PF06835 Lipopolysaccharide-assembly, LptC-related G7042_20125 PF03968 OstA-like protein G7042_20130 PF00005 ABC transporter G7042_20130 PF12399 Branched-chain amino acid ATP-binding cassette transporter G7042_20135 PF00309 Sigma-54 factor, Activator interacting domain (AID) G7042_20135 PF04963 Sigma-54 factor, core binding domain G7042_20135 PF04552 Sigma-54, DNA binding domain G7042_20140 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein G7042_20145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 G7042_20150 PF03668 P-loop ATPase protein family G7042_20155 PF00381 PTS HPr component phosphorylation site G7042_20160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 G7042_20160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit G7042_20160 PF02378 Phosphotransferase system, EIIC G7042_20165 PF07071 KDGP aldolase G7042_20170 PF03841 L-seryl-tRNA selenium transferase G7042_20175 PF01979 Amidohydrolase family G7042_20205 PF13180 PDZ domain G7042_20210 PF00595 PDZ domain G7042_20210 PF13180 PDZ domain G7042_20220 PF03969 AFG1-like ATPase G7042_20225 PF00572 Ribosomal protein L13 G7042_20230 PF00380 Ribosomal protein S9/S16 G7042_20235 PF00355 Rieske [2Fe-2S] domain G7042_20235 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal G7042_20240 PF00033 Cytochrome b/b6/petB G7042_20240 PF00032 Cytochrome b(C-terminal)/b6/petD G7042_20245 PF02167 Cytochrome C1 family G7042_20250 PF00043 Glutathione S-transferase, C-terminal domain G7042_20250 PF02798 Glutathione S-transferase, N-terminal domain G7042_20255 PF04386 Stringent starvation protein B G7042_20260 PF04972 BON domain G7042_20265 PF13580 SIS domain G7042_20275 PF04348 LppC putative lipoprotein G7042_20280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases G7042_20295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term G7042_20300 PF00813 FliP family G7042_20305 PF01313 Bacterial export proteins, family 3 G7042_20310 PF01311 Bacterial export proteins, family 1 G7042_20315 PF01312 FlhB HrpN YscU SpaS Family G7042_20350 PF00999 Sodium/hydrogen exchanger family G7042_20350 PF02254 TrkA-N domain G7042_20355 PF02525 Flavodoxin-like fold G7042_20370 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain G7042_20370 PF00326 Prolyl oligopeptidase family G7042_20390 PF07947 YhhN family G7042_20395 PF07690 Major Facilitator Superfamily G7042_20400 PF13533 Biotin-lipoyl like G7042_20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_20405 PF03466 LysR substrate binding domain G7042_20415 PF00375 Sodium:dicarboxylate symporter family G7042_20420 PF10678 Protein of unknown function (DUF2492) G7042_20425 PF01914 MarC family integral membrane protein G7042_20430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_20430 PF03466 LysR substrate binding domain G7042_20435 PF02416 mttA/Hcf106 family G7042_20445 PF01464 Transglycosylase SLT domain G7042_20445 PF00497 Bacterial extracellular solute-binding proteins, family 3 G7042_20455 PF13091 PLD-like domain G7042_20465 PF00440 Bacterial regulatory proteins, tetR family G7042_20490 PF02881 SRP54-type protein, helical bundle domain G7042_20490 PF00448 SRP54-type protein, GTPase domain G7042_20495 PF00005 ABC transporter G7042_20500 PF18075 FtsX extracellular domain G7042_20505 PF04542 Sigma-70 region 2 G7042_20505 PF04545 Sigma-70, region 4 G7042_20505 PF00140 Sigma-70 factor, region 1.2 G7042_20510 PF00484 Carbonic anhydrase G7042_20515 PF00392 Bacterial regulatory proteins, gntR family G7042_20515 PF07702 UTRA domain G7042_20520 PF01979 Amidohydrolase family G7042_20525 PF00491 Arginase family G7042_20530 PF01175 Urocanase Rossmann-like domain G7042_20530 PF17392 Urocanase C-terminal domain G7042_20530 PF17391 Urocanase N-terminal domain G7042_20535 PF00221 Aromatic amino acid lyase G7042_20540 PF01699 Sodium/calcium exchanger protein G7042_20550 PF00563 EAL domain G7042_20550 PF17157 Gammaproteobacterial periplasmic sensor domain G7042_20550 PF00990 Diguanylate cyclase, GGDEF domain G7042_20580 PF03958 Bacterial type II/III secretion system short domain G7042_20580 PF00263 Bacterial type II and III secretion system protein G7042_20615 PF04085 rod shape-determining protein MreC G7042_20620 PF04093 rod shape-determining protein MreD G7042_20625 PF02545 Maf-like protein G7042_20630 PF10150 Ribonuclease E/G family G7042_20630 PF00575 S1 RNA binding domain G7042_20635 PF13502 AsmA-like C-terminal region G7042_20635 PF13116 Protein of unknown function G7042_20645 PF00795 Carbon-nitrogen hydrolase G7042_20650 PF01523 Putative modulator of DNA gyrase G7042_20660 PF01914 MarC family integral membrane protein G7042_20665 PF07690 Major Facilitator Superfamily G7042_20675 PF00072 Response regulator receiver domain G7042_20680 PF00672 HAMP domain G7042_20680 PF00512 His Kinase A (phospho-acceptor) domain G7042_20680 PF01627 Hpt domain G7042_20680 PF00072 Response regulator receiver domain G7042_20680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_20680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) G7042_20685 PF13581 Histidine kinase-like ATPase domain G7042_20690 PF08678 Rsbr N terminal G7042_20690 PF01740 STAS domain G7042_20695 PF08447 PAS fold G7042_20695 PF13426 PAS domain G7042_20695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain G7042_20700 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) G7042_20710 PF08668 HDOD domain G7042_20725 PF00999 Sodium/hydrogen exchanger family G7042_20735 PF08443 RimK-like ATP-grasp domain G7042_20735 PF18030 RimK PreATP-grasp domain G7042_20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase G7042_20745 PF00486 Transcriptional regulatory protein, C terminal G7042_20745 PF00072 Response regulator receiver domain G7042_20780 PF00909 Ammonium Transporter Family G7042_20785 PF01938 TRAM domain G7042_20785 PF05958 tRNA (Uracil-5-)-methyltransferase G7042_20790 PF00583 Acetyltransferase (GNAT) family G7042_20795 PF07963 Prokaryotic N-terminal methylation motif G7042_20800 PF01026 TatD related DNase G7042_20815 PF01791 DeoC/LacD family aldolase G7042_20820 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain G7042_20820 PF02885 Glycosyl transferase family, helical bundle domain G7042_20820 PF00591 Glycosyl transferase family, a/b domain G7042_20825 PF01676 Metalloenzyme superfamily G7042_20830 PF01048 Phosphorylase superfamily G7042_20840 PF18429 Domain of unknown function (DUF5609) G7042_20855 PF18073 Rubredoxin metal binding domain G7042_20860 PF07238 PilZ domain G7042_20865 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ G7042_20875 PF00216 Bacterial DNA-binding protein G7042_20890 PF01207 Dihydrouridine synthase (Dus) G7042_20895 PF01475 Ferric uptake regulator family G7042_20910 PF05525 Branched-chain amino acid transport protein G7042_20915 PF05175 Methyltransferase small domain G7042_20920 PF00270 DEAD/DEAH box helicase G7042_20920 PF00271 Helicase conserved C-terminal domain G7042_20925 PF03883 Peroxide stress protein YaaA G7042_20930 PF00437 Type II/IV secretion system protein G7042_20935 PF00437 Type II/IV secretion system protein G7042_20940 PF01168 Alanine racemase, N-terminal domain G7042_20945 PF03807 NADP oxidoreductase coenzyme F420-dependent G7042_20945 PF14748 Pyrroline-5-carboxylate reductase dimerisation G7042_20950 PF02325 YGGT family G7042_20955 PF02594 Uncharacterised ACR, YggU family COG1872 G7042_20970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_20980 PF00132 Bacterial transferase hexapeptide (six repeats) G7042_20985 PF10952 Protein of unknown function (DUF2753) G7042_20990 PF00378 Enoyl-CoA hydratase/isomerase G7042_21005 PF00106 short chain dehydrogenase G7042_21010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_21010 PF03466 LysR substrate binding domain G7042_21015 PF04371 Porphyromonas-type peptidyl-arginine deiminase G7042_21020 PF01425 Amidase G7042_21030 PF00872 Transposase, Mutator family G7042_21065 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin G7042_21085 PF09013 YopH, N-terminal G7042_21085 PF00102 Protein-tyrosine phosphatase G7042_21125 PF01964 Radical SAM ThiC family G7042_21125 PF13667 ThiC-associated domain G7042_21130 PF02581 Thiamine monophosphate synthase G7042_21135 PF00899 ThiF family G7042_21145 PF05690 Thiazole biosynthesis protein ThiG G7042_21150 PF04055 Radical SAM superfamily G7042_21150 PF06968 Biotin and Thiamin Synthesis associated domain G7042_21175 PF01609 Transposase DDE domain G7042_21175 PF13808 DDE_Tnp_1-associated G7042_21185 PF06055 Exopolysaccharide synthesis, ExoD G7042_21195 PF08803 Putative mono-oxygenase ydhR G7042_21220 PF07715 TonB-dependent Receptor Plug Domain G7042_21220 PF00593 TonB dependent receptor G7042_21235 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded G7042_21250 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase G7042_21255 PF02602 Uroporphyrinogen-III synthase HemD G7042_21260 PF03900 Porphobilinogen deaminase, C-terminal domain G7042_21260 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain G7042_21265 PF01295 Adenylate cyclase, class-I G7042_21265 PF12633 Adenylate cyclase NT domain G7042_21270 PF02230 Phospholipase/Carboxylesterase G7042_21275 PF01491 Frataxin-like domain G7042_21285 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain G7042_21285 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain G7042_21290 PF01678 Diaminopimelate epimerase G7042_21300 PF00589 Phage integrase family G7042_21300 PF02899 Phage integrase, N-terminal SAM-like domain G7042_21305 PF13419 Haloacid dehalogenase-like hydrolase G7042_21315 PF00924 Mechanosensitive ion channel G7042_21325 PF07722 Peptidase C26 G7042_21355 PF00005 ABC transporter G7042_21365 PF00994 Probable molybdopterin binding domain G7042_21365 PF02464 Competence-damaged protein G7042_21370 PF12072 Domain of unknown function (DUF3552) G7042_21370 PF00013 KH domain G7042_21370 PF01966 HD domain G7042_21375 PF04204 Homoserine O-succinyltransferase G7042_21385 PF01037 Lrp/AsnC ligand binding domain G7042_21390 PF00884 Sulfatase G7042_21405 PF16657 Maltogenic Amylase, C-terminal domain G7042_21405 PF02903 Alpha amylase, N-terminal ig-like domain G7042_21405 PF00128 Alpha amylase, catalytic domain G7042_21410 PF02308 MgtC family G7042_21430 PF00106 short chain dehydrogenase G7042_21435 PF03577 Peptidase family C69 G7042_21450 PF00465 Iron-containing alcohol dehydrogenase G7042_21460 PF01053 Cys/Met metabolism PLP-dependent enzyme G7042_21475 PF00141 Peroxidase G7042_21490 PF03280 Proteobacterial lipase chaperone protein G7042_21495 PF00561 alpha/beta hydrolase fold G7042_21505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain G7042_21505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain G7042_21510 PF02698 DUF218 domain G7042_21525 PF01609 Transposase DDE domain G7042_21525 PF13808 DDE_Tnp_1-associated G7042_21560 PF13808 DDE_Tnp_1-associated G7042_21560 PF01609 Transposase DDE domain G7042_21565 PF18273 Type III R-M EcoP15I C-terminal domain G7042_21565 PF01555 DNA methylase G7042_21575 PF00239 Resolvase, N terminal domain G7042_21575 PF02796 Helix-turn-helix domain of resolvase G7042_21595 PF01848 Hok/gef family G7042_21610 PF13356 Arm DNA-binding domain G7042_21610 PF00589 Phage integrase family G7042_21625 PF03739 Lipopolysaccharide export system permease LptF/LptG G7042_21630 PF03739 Lipopolysaccharide export system permease LptF/LptG G7042_21635 PF00883 Cytosol aminopeptidase family, catalytic domain G7042_21635 PF02789 Cytosol aminopeptidase family, N-terminal domain G7042_21640 PF04364 DNA polymerase III chi subunit, HolC G7042_21645 PF10458 Valyl tRNA synthetase tRNA binding arm G7042_21645 PF00133 tRNA synthetases class I (I, L, M and V) G7042_21645 PF08264 Anticodon-binding domain of tRNA G7042_21655 PF09335 SNARE associated Golgi protein G7042_21660 PF00768 D-alanyl-D-alanine carboxypeptidase G7042_21685 PF02599 Global regulator protein family G7042_21690 PF01842 ACT domain G7042_21690 PF13840 ACT domain G7042_21690 PF00696 Amino acid kinase family G7042_21695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain G7042_21695 PF02272 DHHA1 domain G7042_21695 PF01411 tRNA synthetases class II (A) G7042_21700 PF02631 RecX family G7042_21705 PF00154 recA bacterial DNA recombination protein G7042_21710 PF02464 Competence-damaged protein G7042_21715 PF04073 Aminoacyl-tRNA editing domain G7042_21735 PF00155 Aminotransferase class I and II G7042_21735 PF00392 Bacterial regulatory proteins, gntR family G7042_21755 PF04172 LrgB-like family G7042_21770 PF03447 Homoserine dehydrogenase, NAD binding domain G7042_21770 PF00742 Homoserine dehydrogenase G7042_21770 PF00696 Amino acid kinase family G7042_21775 PF01053 Cys/Met metabolism PLP-dependent enzyme G7042_21780 PF01340 Met Apo-repressor, MetJ G7042_21785 PF12833 Helix-turn-helix domain G7042_21785 PF02311 AraC-like ligand binding domain G7042_21790 PF01588 Putative tRNA binding domain G7042_21795 PF03222 Tryptophan/tyrosine permease family G7042_21800 PF00459 Inositol monophosphatase family G7042_21805 PF00293 NUDIX domain G7042_21810 PF13419 Haloacid dehalogenase-like hydrolase G7042_21815 PF00579 tRNA synthetases class I (W and Y) G7042_21815 PF01479 S4 domain G7042_21820 PF00196 Bacterial regulatory proteins, luxR family G7042_21825 PF01203 Type II secretion system (T2SS), protein N G7042_21830 PF04612 Type II secretion system (T2SS), protein M G7042_21835 PF12693 GspL periplasmic domain G7042_21835 PF05134 Type II secretion system (T2SS), protein L G7042_21840 PF03934 Type II secretion system (T2SS), protein K G7042_21845 PF11612 Type II secretion system (T2SS), protein J G7042_21845 PF07963 Prokaryotic N-terminal methylation motif G7042_21850 PF02501 Type II secretion system (T2SS), protein I G7042_21850 PF07963 Prokaryotic N-terminal methylation motif G7042_21855 PF12019 Type II transport protein GspH G7042_21855 PF07963 Prokaryotic N-terminal methylation motif G7042_21860 PF08334 Type II secretion system (T2SS), protein G G7042_21860 PF07963 Prokaryotic N-terminal methylation motif G7042_21865 PF00482 Type II secretion system (T2SS), protein F G7042_21870 PF00437 Type II/IV secretion system protein G7042_21875 PF00263 Bacterial type II and III secretion system protein G7042_21875 PF03958 Bacterial type II/III secretion system short domain G7042_21880 PF11356 Type II secretion system protein C G7042_21885 PF01479 S4 domain G7042_21890 PF01430 Hsp33 protein G7042_21895 PF01293 Phosphoenolpyruvate carboxykinase G7042_21900 PF00392 Bacterial regulatory proteins, gntR family G7042_21905 PF00557 Metallopeptidase family M24 G7042_21905 PF01321 Creatinase/Prolidase N-terminal domain G7042_21910 PF11756 Nitrous oxide-stimulated promoter G7042_21915 PF00583 Acetyltransferase (GNAT) family G7042_21920 PF05433 Glycine zipper 2TM domain G7042_21925 PF02872 5'-nucleotidase, C-terminal domain G7042_21925 PF00149 Calcineurin-like phosphoesterase G7042_21930 PF01810 LysE type translocator G7042_21935 PF03472 Autoinducer binding domain G7042_21935 PF00196 Bacterial regulatory proteins, luxR family G7042_21940 PF00765 Autoinducer synthase G7042_21945 PF03466 LysR substrate binding domain G7042_21945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_21950 PF08206 Ribonuclease B OB domain G7042_21950 PF17876 Cold shock domain G7042_21950 PF00773 RNB domain G7042_21965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 G7042_21965 PF02378 Phosphotransferase system, EIIC G7042_21965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit G7042_21970 PF08125 Mannitol dehydrogenase C-terminal domain G7042_21970 PF01232 Mannitol dehydrogenase Rossmann domain G7042_21975 PF05068 Mannitol repressor G7042_21980 PF03471 Transporter associated domain G7042_21980 PF00999 Sodium/hydrogen exchanger family G7042_21980 PF02080 TrkA-C domain G7042_21985 PF00684 DnaJ central domain G7042_21985 PF00226 DnaJ domain G7042_21985 PF01556 DnaJ C terminal domain G7042_22000 PF01544 CorA-like Mg2+ transporter protein G7042_22005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 G7042_22020 PF04307 LexA-binding, inner membrane-associated putative hydrolase G7042_22025 PF07670 Nucleoside recognition G7042_22025 PF01773 Na+ dependent nucleoside transporter N-terminus G7042_22025 PF07662 Na+ dependent nucleoside transporter C-terminus G7042_22035 PF00270 DEAD/DEAH box helicase G7042_22035 PF03880 DbpA RNA binding domain G7042_22035 PF00271 Helicase conserved C-terminal domain G7042_22060 PF01040 UbiA prenyltransferase family G7042_22065 PF00425 chorismate binding enzyme G7042_22070 PF16582 Middle domain of thiamine pyrophosphate G7042_22070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain G7042_22070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain G7042_22075 PF12697 Alpha/beta hydrolase family G7042_22080 PF00378 Enoyl-CoA hydratase/isomerase G7042_22085 PF13378 Enolase C-terminal domain-like G7042_22090 PF00501 AMP-binding enzyme G7042_22100 PF13808 DDE_Tnp_1-associated G7042_22100 PF01609 Transposase DDE domain G7042_22120 PF00102 Protein-tyrosine phosphatase G7042_22120 PF09013 YopH, N-terminal G7042_22150 PF00270 DEAD/DEAH box helicase G7042_22150 PF00271 Helicase conserved C-terminal domain G7042_22155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family G7042_22155 PF03466 LysR substrate binding domain G7042_22170 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase G7042_22190 PF00445 Ribonuclease T2 family G7042_22230 PF01810 LysE type translocator G7042_22235 PF02954 Bacterial regulatory protein, Fis family G7042_22240 PF01207 Dihydrouridine synthase (Dus) G7042_22245 PF02321 Outer membrane efflux protein G7042_22250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion G7042_22280 PF00072 Response regulator receiver domain G7042_22285 PF00854 POT family G7042_22290 PF00483 Nucleotidyl transferase G7042_22300 PF00459 Inositol monophosphatase family G7042_22305 PF03795 YCII-related domain G7042_22310 PF04279 Intracellular septation protein A G7042_22315 PF00282 Pyridoxal-dependent decarboxylase conserved domain G7042_22320 PF03006 Haemolysin-III related G7042_22325 PF06826 Predicted Permease Membrane Region G7042_22325 PF02080 TrkA-C domain G7042_22335 PF01584 CheW-like domain G7042_22335 PF00072 Response regulator receiver domain G7042_22340 PF13472 GDSL-like Lipase/Acylhydrolase family G7042_22345 PF00005 ABC transporter G7042_22355 PF01370 NAD dependent epimerase/dehydratase family G7042_22355 PF08338 Domain of unknown function (DUF1731) G7042_22360 PF12792 CSS motif domain associated with EAL G7042_22360 PF00563 EAL domain G7042_22365 PF00155 Aminotransferase class I and II G7042_22370 PF04389 Peptidase family M28 G7042_22370 PF01483 Proprotein convertase P-domain G7042_22375 PF02390 Putative methyltransferase G7042_22380 PF04320 Protein with unknown function (DUF469) G7042_22385 PF04960 Glutaminase G7042_22390 PF00581 Rhodanese-like domain G7042_22395 PF06004 Bacterial protein of unknown function (DUF903) G7042_22400 PF00005 ABC transporter G7042_22400 PF00664 ABC transporter transmembrane region G7042_22405 PF00561 alpha/beta hydrolase fold G7042_22415 PF00732 GMC oxidoreductase G7042_22415 PF05199 GMC oxidoreductase G7042_22440 PF00801 PKD domain G7042_22440 PF05547 Immune inhibitor A peptidase M6 G7042_22445 PF06877 Regulator of ribonuclease activity B G7042_22450 PF00563 EAL domain G7042_22450 PF00990 Diguanylate cyclase, GGDEF domain G7042_22450 PF03707 Bacterial signalling protein N terminal repeat G7042_22470 PF09905 DNA-binding protein VF530 G7042_22475 PF02666 Phosphatidylserine decarboxylase G7042_22480 PF03193 RsgA GTPase G7042_22485 PF00929 Exonuclease G7042_22530 PF00313 'Cold-shock' DNA-binding domain G7042_22545 PF00749 tRNA synthetases class I (E and Q), catalytic domain G7042_22580 PF00704 Glycosyl hydrolases family 18 G7042_22580 PF06483 Chitinase C G7042_22595 PF02472 Biopolymer transport protein ExbD/TolR G7042_22600 PF01618 MotA/TolQ/ExbB proton channel family G7042_22605 PF01618 MotA/TolQ/ExbB proton channel family G7042_22615 PF07715 TonB-dependent Receptor Plug Domain G7042_22615 PF00593 TonB dependent receptor G7042_22620 PF01609 Transposase DDE domain G7042_22620 PF13808 DDE_Tnp_1-associated G7042_22640 PF00528 Binding-protein-dependent transport system inner membrane component G7042_22640 PF12911 N-terminal TM domain of oligopeptide transport permease C G7042_22645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle G7042_22650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_22650 PF00005 ABC transporter G7042_22655 PF00005 ABC transporter G7042_22655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region G7042_22660 PF07687 Peptidase dimerisation domain G7042_22660 PF01546 Peptidase family M20/M25/M40 G7042_22680 PF09669 Phage regulatory protein Rha (Phage_pRha) G7042_22680 PF10549 ORF11CD3 domain G7042_22705 PF00813 FliP family G7042_22710 PF01313 Bacterial export proteins, family 3 G7042_22715 PF01311 Bacterial export proteins, family 1 G7042_22720 PF01312 FlhB HrpN YscU SpaS Family G7042_22740 PF00561 alpha/beta hydrolase fold G7042_22750 PF13614 AAA domain G7042_22770 PF01695 IstB-like ATP binding protein G7042_22785 PF00239 Resolvase, N terminal domain G7042_22785 PF02796 Helix-turn-helix domain of resolvase G7042_22815 PF13592 Winged helix-turn helix G7042_22815 PF13358 DDE superfamily endonuclease G7042_22835 PF01848 Hok/gef family G7042_22845 PF00069 Protein kinase domain G7042_22845 PF09632 Rac1-binding domain G7042_22865 PF00816 H-NS histone family G7042_22870 PF02796 Helix-turn-helix domain of resolvase G7042_22870 PF00239 Resolvase, N terminal domain G7042_22875 PF01934 Protein of unknown function DUF86 G7042_22895 PF13614 AAA domain G7042_22930 PF02371 Transposase IS116/IS110/IS902 family G7042_22930 PF01548 Transposase G7042_22940 PF02108 Flagellar assembly protein FliH G7042_22945 PF06578 YOP proteins translocation protein K (YscK) G7042_22950 PF01514 Secretory protein of YscJ/FliF family G7042_22955 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI G7042_22960 PF09025 YopR, type III needle-polymerisation regulator G7042_22965 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) G7042_22970 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF G7042_22980 PF16693 Inner membrane component of T3SS, periplasmic domain G7042_22980 PF16697 Inner membrane component of T3SS, cytoplasmic domain G7042_22985 PF00263 Bacterial type II and III secretion system protein G7042_22985 PF03958 Bacterial type II/III secretion system short domain G7042_22990 PF05932 Tir chaperone protein (CesT) family G7042_23000 PF12833 Helix-turn-helix domain G7042_23015 PF05932 Tir chaperone protein (CesT) family G7042_23020 PF05844 YopD protein G7042_23025 PF04888 Secretion system effector C (SseC) like family G7042_23030 PF07720 Tetratricopeptide repeat G7042_23035 PF04792 V antigen (LcrV) protein G7042_23040 PF07216 LcrG protein G7042_23045 PF09621 Type III secretion system regulator (LcrR) G7042_23050 PF00771 FHIPEP family G7042_23060 PF09474 Type III secretion system YscX (type_III_YscX) G7042_23070 PF09059 TyeA G7042_23075 PF07201 HrpJ-like domain G7042_23080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain G7042_23080 PF02874 ATP synthase alpha/beta family, beta-barrel domain G7042_23080 PF18269 T3SS EscN ATPase C-terminal domain G7042_23120 PF00176 SNF2 family N-terminal domain G7042_23120 PF12419 SNF2 Helicase protein G7042_23120 PF00271 Helicase conserved C-terminal domain G7042_23140 PF13614 AAA domain G7042_23165 PF01848 Hok/gef family G7042_23190 PF04002 RadC-like JAB domain G7042_23205 PF01555 DNA methylase G7042_23245 PF01464 Transglycosylase SLT domain G7042_23250 PF05261 TraM protein, DNA-binding G7042_23255 PF07057 DNA helicase TraI G7042_23255 PF18340 DNA relaxase TraI 2B/2B-like domain G7042_23255 PF08751 TrwC relaxase G7042_23255 PF18272 single-stranded DNA binding TraI N-terminal subdomain G7042_23260 PF10412 Type IV secretion-system coupling protein DNA-binding domain G7042_23260 PF12615 F sex factor protein N terminal G7042_23265 PF05818 Enterobacterial TraT complement resistance protein G7042_23275 PF07916 TraG-like protein, N-terminal region G7042_23280 PF06122 Conjugative relaxosome accessory transposon protein G7042_23285 PF13728 F plasmid transfer operon protein G7042_23295 PF13728 F plasmid transfer operon protein G7042_23300 PF06986 Type-1V conjugative transfer system mating pair stabilisation G7042_23310 PF09673 Type-F conjugative transfer system pilin assembly protein G7042_23315 PF06834 TraU protein G7042_23320 PF12477 Sex factor F TraW protein N terminal G7042_23330 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer G7042_23335 PF09676 Type IV conjugative transfer system lipoprotein (TraV) G7042_23340 PF03743 Bacterial conjugation TrbI-like protein G7042_23350 PF05309 TraE protein G7042_23355 PF07178 TraL protein G7042_23360 PF05513 TraA G7042_23380 PF01934 Protein of unknown function DUF86 G7042_23390 PF01526 Tn3 transposase DDE domain G7042_23390 PF13700 Domain of unknown function (DUF4158) G7042_23400 PF13614 AAA domain G7042_23445 PF01527 Transposase G7042_23455 PF00665 Integrase core domain G7042_23475 PF00809 Pterin binding enzyme G7042_23505 PF13362 Toprim domain G7042_23505 PF08401 Domain of unknown function (DUF1738) G7042_23505 PF18818 Metallopeptidase superfamily domain G7042_23515 PF08401 Domain of unknown function (DUF1738) G7042_23515 PF18818 Metallopeptidase superfamily domain G7042_23515 PF13362 Toprim domain G7042_23520 PF02534 Type IV secretory system Conjugative DNA transfer G7042_23525 PF00437 Type II/IV secretion system protein G7042_23530 PF03743 Bacterial conjugation TrbI-like protein G7042_23535 PF03524 Conjugal transfer protein G7042_23540 PF04335 VirB8 protein G7042_23560 PF03135 CagE, TrbE, VirB family, component of type IV transporter system G7042_23575 PF01396 Topoisomerase DNA binding C4 zinc finger G7042_23575 PF01751 Toprim domain G7042_23575 PF01131 DNA topoisomerase G7042_23610 PF02796 Helix-turn-helix domain of resolvase G7042_23610 PF00239 Resolvase, N terminal domain G7042_23645 PF02796 Helix-turn-helix domain of resolvase G7042_23645 PF00239 Resolvase, N terminal domain G7042_23675 PF00899 ThiF family G7042_23685 PF01381 Helix-turn-helix G7042_23700 PF02796 Helix-turn-helix domain of resolvase G7042_23700 PF00239 Resolvase, N terminal domain G7042_23705 PF01526 Tn3 transposase DDE domain G7042_23705 PF13700 Domain of unknown function (DUF4158) G7042_23710 PF03230 Antirestriction protein G7042_23725 PF16509 TrfB plasmid transcriptional repressor G7042_23730 PF13614 AAA domain G7042_23735 PF06613 KorB C-terminal beta-barrel domain G7042_23735 PF02195 ParB-like nuclease domain G7042_23735 PF08535 KorB domain G7042_23760 PF11798 IMS family HHH motif G7042_23760 PF11799 impB/mucB/samB family C-terminal domain G7042_23760 PF00817 impB/mucB/samB family G7042_23770 PF07690 Major Facilitator Superfamily G7042_23775 PF02909 Tetracyclin repressor-like, C-terminal domain G7042_23775 PF00440 Bacterial regulatory proteins, tetR family