locus-tag	class	description
Asalp_00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Asalp_00020	COG0592	DNA-directed DNA polymerase activity
Asalp_00040	COG0187	DNA topoisomerase II activity
Asalp_00070	COG2378	regulation of single-species biofilm formation
Asalp_00090	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
Asalp_00100	COG0071	Belongs to the small heat shock protein (HSP20) family
Asalp_00110	COG0071	Belongs to the small heat shock protein (HSP20) family
Asalp_00120	COG3977	Valine--pyruvate aminotransferase
Asalp_00150	COG2814	Major facilitator Superfamily
Asalp_00160	COG0745	RESPONSE REGULATOR receiver
Asalp_00170	COG2205	protein histidine kinase activity
Asalp_00220	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Asalp_00230	COG4191	Histidine kinase
Asalp_00230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Asalp_00240	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Asalp_00260	COG1309	transcriptional regulator
Asalp_00290	COG0561	phosphatase activity
Asalp_00300	COG2267	carboxylic ester hydrolase activity
Asalp_00310	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Asalp_00320	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Asalp_00330	COG1758	RNA polymerase activity
Asalp_00340	COG0194	GDP metabolic process
Asalp_00350	COG0859	PFAM glycosyl transferase family 9
Asalp_00360	COG3642	lipopolysaccharide core region biosynthetic process
Asalp_00440	COG0589	response to stress
Asalp_00460	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Asalp_00470	COG3706	GGDEF domain
Asalp_00480	COG1528	Iron-storage protein
Asalp_00490	COG2081	HI0933 family
Asalp_00510	COG3275	phosphorelay sensor kinase activity
Asalp_00520	COG3279	Response regulator of the LytR AlgR family
Asalp_00530	COG2223	nitrite transmembrane transporter activity
Asalp_00540	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Asalp_00580	COG0583	DNA-binding transcription factor activity
Asalp_00600	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Asalp_00650	COG0583	DNA-binding transcription factor activity
Asalp_00660	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Asalp_00670	COG0166	Belongs to the GPI family
Asalp_00690	COG0668	transmembrane transport
Asalp_00700	COG1309	transcriptional regulator
Asalp_00710	COG0756	dUTP diphosphatase activity
Asalp_00720	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Asalp_00730	COG2003	Belongs to the UPF0758 family
Asalp_00740	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Asalp_00750	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Asalp_00780	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Asalp_00790	COG2990	Protein conserved in bacteria
Asalp_00800	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
Asalp_00810	COG0859	PFAM glycosyl transferase family 9
Asalp_00820	COG0463	Glycosyl transferase, family 2
Asalp_00830	COG0859	PFAM glycosyl transferase family 9
Asalp_00840	COG1519	Transferase
Asalp_00870	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
Asalp_00880	COG1609	Transcriptional regulator
Asalp_00890	COG0604	alcohol dehydrogenase
Asalp_00930	COG1580	Controls the rotational direction of flagella during chemotaxis
Asalp_00940	COG3161	chorismate lyase activity
Asalp_00950	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Asalp_00960	COG2937	Belongs to the GPAT DAPAT family
Asalp_00970	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Asalp_01020	COG0534	Mate efflux family protein
Asalp_01030	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Asalp_01040	COG2205	protein histidine kinase activity
Asalp_01050	COG0745	RESPONSE REGULATOR receiver
Asalp_01070	COG1045	serine acetyltransferase
Asalp_01090	COG3074	FtsZ-dependent cytokinesis
Asalp_01100	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
Asalp_01120	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Asalp_01120	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Asalp_01130	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Asalp_01150	COG0385	Bile acid
Asalp_01160	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Asalp_01180	COG3385	transposase activity
Asalp_01210	COG0583	DNA-binding transcription factor activity
Asalp_01280	COG0210	DNA helicase
Asalp_01420	COG2823	Periplasmic or secreted lipoprotein
Asalp_01470	COG1280	lysine exporter protein (LysE YggA)
Asalp_01480	COG2391	methyltransferase activity
Asalp_01500	COG1280	lysine exporter protein (LysE YggA)
Asalp_01520	COG2962	Rard protein
Asalp_01560	COG1012	belongs to the aldehyde dehydrogenase family
Asalp_01600	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Asalp_01600	COG0519	Catalyzes the synthesis of GMP from XMP
Asalp_01620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Asalp_01660	COG1322	Protein conserved in bacteria
Asalp_01670	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Asalp_01680	COG0569	domain protein
Asalp_01690	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Asalp_01690	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Asalp_01700	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Asalp_01710	COG0242	peptide deformylase activity
Asalp_01720	COG1652	LysM domain
Asalp_01730	COG0758	DNA mediated transformation
Asalp_01740	COG2922	Belongs to the Smg family
Asalp_01750	COG0551	DNA topoisomerase type I activity
Asalp_01770	COG0009	L-threonylcarbamoyladenylate synthase
Asalp_01780	COG0408	coproporphyrinogen oxidase activity
Asalp_01790	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Asalp_01810	COG0218	Necessary for normal cell division and for the maintenance of normal septation
Asalp_01830	COG3078	GTPase activator activity
Asalp_01850	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Asalp_01860	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Asalp_01870	COG2204	response regulator
Asalp_01880	COG3852	Histidine kinase
Asalp_01900	COG0174	glutamine synthetase
Asalp_01920	COG1295	ribonuclease BN
Asalp_01930	COG1490	D-aminoacyl-tRNA deacylase activity
Asalp_01980	COG0456	acetyltransferase
Asalp_02000	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Asalp_02020	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Asalp_02030	COG2610	gluconate transmembrane transporter activity
Asalp_02040	COG3265	gluconokinase activity
Asalp_02050	COG0129	dihydroxy-acid dehydratase activity
Asalp_02060	COG0800	Aldolase
Asalp_02070	COG1609	Transcriptional regulator
Asalp_02100	COG4942	peptidase
Asalp_02110	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Asalp_02120	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Asalp_02130	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
Asalp_02140	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
Asalp_02150	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
Asalp_02150	COG0316	Belongs to the HesB IscA family
Asalp_02160	COG1040	competence protein
Asalp_02170	COG0596	Alpha beta hydrolase
Asalp_02220	COG2183	response to ionizing radiation
Asalp_02230	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Asalp_02240	COG0745	RESPONSE REGULATOR receiver
Asalp_02270	COG0051	transcription antitermination factor activity, RNA binding
Asalp_02280	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Asalp_02290	COG0088	Forms part of the polypeptide exit tunnel
Asalp_02300	COG0089	rRNA binding
Asalp_02310	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Asalp_02320	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Asalp_02330	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Asalp_02340	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Asalp_02350	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Asalp_02360	COG0255	Belongs to the universal ribosomal protein uL29 family
Asalp_02370	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Asalp_02380	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Asalp_02390	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Asalp_02400	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Asalp_02410	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Asalp_02420	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Asalp_02430	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Asalp_02440	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Asalp_02450	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Asalp_02460	COG1841	ribosomal large subunit assembly
Asalp_02470	COG0200	Binds to the 23S rRNA
Asalp_02480	COG0201	protein transport
Asalp_02490	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Asalp_02500	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Asalp_02510	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Asalp_02520	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Asalp_02530	COG0202	RNA polymerase activity
Asalp_02540	COG0203	ribosomal protein L17
Asalp_02550	COG1484	DNA-dependent DNA replication
Asalp_02560	COG4584	PFAM Integrase catalytic
Asalp_02610	COG2249	NAD(P)H dehydrogenase (quinone) activity
Asalp_02640	COG1770	oligopeptidase
Asalp_02680	COG3714	YhhN family
Asalp_02740	COG1301	dicarboxylic acid transport
Asalp_02760	COG2095	MarC family integral membrane protein
Asalp_02780	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Asalp_02810	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
Asalp_02830	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Asalp_02890	COG0742	ribosomal rna small subunit methyltransferase
Asalp_02900	COG0552	protein localization to endoplasmic reticulum
Asalp_02910	COG2884	Cell division ATP-binding protein ftsE
Asalp_02920	COG2177	Part of the ABC transporter FtsEX involved in
Asalp_02940	COG3385	transposase activity
Asalp_02950	COG0288	reversible hydration of carbon dioxide
Asalp_02960	COG2188	Transcriptional regulator
Asalp_02970	COG1228	amidohydrolase
Asalp_02980	COG0010	Belongs to the arginase family
Asalp_02990	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
Asalp_03000	COG2986	histidine ammonia-lyase
Asalp_03010	COG3385	transposase activity
Asalp_03020	COG0387	Pfam Sodium calcium exchanger
Asalp_03050	COG2199	diguanylate cyclase activity
Asalp_03050	COG2200	EAL domain
Asalp_03140	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Asalp_03150	COG1459	type II secretion system
Asalp_03240	COG1077	Cell shape determining protein MreB Mrl
Asalp_03250	COG1792	Involved in formation and maintenance of cell shape
Asalp_03260	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
Asalp_03270	COG0424	maF-like protein
Asalp_03280	COG1530	ribonuclease E activity
Asalp_03290	COG3164	Protein of unknown function
Asalp_03310	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Asalp_03320	COG0312	modulator of DNA gyrase
Asalp_03350	COG0477	Major facilitator Superfamily
Asalp_03370	COG3437	response regulator, receiver
Asalp_03390	COG2172	sigma factor antagonist activity
Asalp_03400	COG1366	Belongs to the anti-sigma-factor antagonist family
Asalp_03420	COG3700	Belongs to the class B bacterial acid phosphatase family
Asalp_03440	COG1639	'signal transduction protein
Asalp_03480	COG3385	transposase activity
Asalp_03510	COG0189	ligase activity
Asalp_03530	COG0745	RESPONSE REGULATOR receiver
Asalp_03580	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Asalp_03590	COG0352	thiamine-phosphate diphosphorylase activity
Asalp_03600	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Asalp_03620	COG2022	thiamine diphosphate biosynthetic process
Asalp_03650	COG3039	Transposase
Asalp_03670	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
Asalp_03710	COG0814	amino acid
Asalp_03720	COG3932	Exopolysaccharide synthesis, ExoD
Asalp_03750	COG1733	regulation of RNA biosynthetic process
Asalp_03830	COG1494	fructose-1,6-bisphosphatase
Asalp_03860	COG2959	enzyme of heme biosynthesis
Asalp_03880	COG0181	hydroxymethylbilane synthase activity
Asalp_03890	COG3072	Adenylate cyclase
Asalp_03900	COG0400	carboxylic ester hydrolase activity
Asalp_03910	COG1965	Belongs to the frataxin family
Asalp_03930	COG0019	diaminopimelate decarboxylase activity
Asalp_03940	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Asalp_03970	COG1011	Hydrolase
Asalp_03990	COG0668	transmembrane transport
Asalp_04010	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
Asalp_04020	COG0561	phosphatase activity
Asalp_04050	COG0842	Transport permease protein
Asalp_04050	COG1129	ABC transporter
Asalp_04070	COG1546	Belongs to the CinA family
Asalp_04070	COG1058	Belongs to the CinA family
Asalp_04090	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
Asalp_04110	COG1522	sequence-specific DNA binding
Asalp_04120	COG1368	sulfuric ester hydrolase activity
Asalp_04180	COG1285	pathogenesis
Asalp_04220	COG4221	oxidoreductase activity
Asalp_04260	COG1979	alcohol dehydrogenase
Asalp_04280	COG2873	o-acetylhomoserine
Asalp_04300	COG4533	DNA binding
Asalp_04310	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
Asalp_04340	COG5380	lipid catabolic process
Asalp_04350	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
Asalp_04380	COG2949	membrane
Asalp_04390	COG3291	Pkd domain containing protein
Asalp_04410	COG3539	Fimbrial protein
Asalp_04420	COG1484	DNA-dependent DNA replication
Asalp_04430	COG4584	PFAM Integrase catalytic
Asalp_04450	COG3188	usher protein
Asalp_04460	COG3121	Chaperone
Asalp_04470	COG3539	Fimbrial protein
Asalp_04500	COG0318	PFAM AMP-dependent synthetase and ligase
Asalp_04520	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
Asalp_04530	COG0596	Alpha beta hydrolase
Asalp_04540	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
Asalp_04550	COG1169	isochorismate synthase
Asalp_04560	COG1575	Belongs to the MenA family. Type 1 subfamily
Asalp_04610	COG0513	Belongs to the DEAD box helicase family
Asalp_04620	COG1988	membrane-bound metal-dependent
Asalp_04650	COG1671	Belongs to the UPF0178 family
Asalp_04690	COG0484	heat shock protein binding
Asalp_04710	COG3722	fumarate hydratase activity
Asalp_04720	COG0246	Mannitol dehydrogenase
Asalp_04730	COG2213	PTS system mannitol-specific
Asalp_04730	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
Asalp_04770	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
Asalp_04810	COG2771	luxR family
Asalp_04840	COG3133	Outer membrane lipoprotein
Asalp_04850	COG0456	acetyltransferase
Asalp_04890	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
Asalp_04900	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Asalp_04930	COG1450	Type ii and iii secretion system protein
Asalp_04940	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Asalp_04950	COG1459	type II secretion system
Asalp_04960	COG2165	general secretion pathway protein
Asalp_04980	COG2165	general secretion pathway protein
Asalp_04990	COG4795	General secretion pathway protein
Asalp_05020	COG3156	type II secretion system protein K
Asalp_05040	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
Asalp_05070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Asalp_05080	COG1011	Hydrolase
Asalp_05090	COG0494	nUDIX hydrolase
Asalp_05100	COG1218	3'(2'),5'-bisphosphate nucleotidase
Asalp_05110	COG0814	amino acid
Asalp_05120	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Asalp_05150	COG0626	cystathionine gamma-synthase activity
Asalp_05160	COG0460	homoserine dehydrogenase
Asalp_05160	COG0527	aspartate kinase activity
Asalp_05190	COG1346	cytolysis
Asalp_05200	COG1380	Effector of murein hydrolase LrgA
Asalp_05210	COG0583	DNA-binding transcription factor activity
Asalp_05280	COG0589	response to stress
Asalp_05290	COG0659	secondary active sulfate transmembrane transporter activity
Asalp_05300	COG1546	Belongs to the CinA family
Asalp_05310	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Asalp_05330	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Asalp_05340	COG0527	aspartate kinase activity
Asalp_05350	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
Asalp_05360	COG1686	Belongs to the peptidase S11 family
Asalp_05370	COG0586	Pfam SNARE associated Golgi protein
Asalp_05380	COG1253	flavin adenine dinucleotide binding
Asalp_05400	COG2927	DNA polymerase III (CHI subunit)
Asalp_05410	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Asalp_05420	COG0795	lipopolysaccharide-transporting ATPase activity
Asalp_05430	COG0795	lipopolysaccharide-transporting ATPase activity
Asalp_05450	COG0004	ammonium transporteR
Asalp_05470	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Asalp_05500	COG0084	hydrolase, TatD family'
Asalp_05510	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Asalp_05540	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Asalp_05550	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
Asalp_05560	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
Asalp_05570	COG0813	purine-nucleoside phosphorylase activity
Asalp_05590	COG0560	Phosphoserine phosphatase
Asalp_05630	COG3385	transposase activity
Asalp_05650	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
Asalp_05680	COG0154	amidase activity
Asalp_05690	COG2957	Belongs to the agmatine deiminase family
Asalp_05710	COG4221	oxidoreductase activity
Asalp_05740	COG1024	Enoyl-CoA hydratase
Asalp_05760	COG0110	maltose O-acetyltransferase activity
Asalp_05780	COG4166	transmembrane transport
Asalp_05810	COG1872	DUF167
Asalp_05820	COG0762	integral membrane protein
Asalp_05830	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
Asalp_05840	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Asalp_05870	COG3022	response to hydroperoxide
Asalp_05880	COG0513	Belongs to the DEAD box helicase family
Asalp_05890	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
Asalp_05930	COG0735	belongs to the Fur family
Asalp_05940	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Asalp_05970	COG0776	regulation of translation
Asalp_06010	COG0513	Belongs to the DEAD box helicase family
Asalp_06050	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
Asalp_06130	COG2205	protein histidine kinase activity
Asalp_06140	COG0745	RESPONSE REGULATOR receiver
Asalp_06150	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Asalp_06160	COG1136	(ABC) transporter
Asalp_06160	COG0577	efflux transmembrane transporter activity
Asalp_06170	COG1505	serine-type exopeptidase activity
Asalp_06180	COG2982	Protein involved in outer membrane biogenesis
Asalp_06200	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_06220	COG3730	PTS system glucitol sorbitol-specific
Asalp_06250	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_06270	COG1349	DNA-binding transcription factor activity
Asalp_06280	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Asalp_06320	COG2130	NADP-dependent
Asalp_06330	COG1764	response to oxidative stress
Asalp_06340	COG1846	Transcriptional regulator
Asalp_06400	COG0561	phosphatase activity
Asalp_06430	COG0733	neurotransmitter:sodium symporter activity
Asalp_06450	COG0733	neurotransmitter:sodium symporter activity
Asalp_06500	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Asalp_06530	COG1794	racemase activity, acting on amino acids and derivatives
Asalp_06550	COG2731	YhcH YjgK YiaL family protein
Asalp_06570	COG0668	transmembrane transport
Asalp_06580	COG1376	ErfK ybiS ycfS ynhG family protein
Asalp_06590	COG3039	Transposase
Asalp_06630	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
Asalp_06650	COG0488	(ABC) transporter
Asalp_06660	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Asalp_06660	COG0517	IMP dehydrogenase activity
Asalp_06680	COG0330	HflC and HflK could
Asalp_06690	COG1648	precorrin-2 dehydrogenase activity
Asalp_06690	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Asalp_06700	COG0175	sulfate reduction
Asalp_06710	COG2895	sulfate adenylyltransferase (ATP) activity
Asalp_06720	COG3273	potassium ion transport
Asalp_06720	COG0471	metal ion transport
Asalp_06730	COG0529	Catalyzes the synthesis of activated sulfate
Asalp_06740	COG3039	Transposase
Asalp_06750	COG0840	transmembrane signaling receptor activity
Asalp_06820	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
Asalp_06860	COG1940	carbohydrate kinase activity
Asalp_06870	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Asalp_06880	COG0126	phosphoglycerate kinase activity
Asalp_06890	COG0191	fructose-bisphosphate aldolase activity
Asalp_06900	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Asalp_06960	COG0583	DNA-binding transcription factor activity
Asalp_07000	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
Asalp_07010	COG1595	DNA-templated transcription, initiation
Asalp_07020	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
Asalp_07050	COG0481	GTPase activity
Asalp_07060	COG0681	Belongs to the peptidase S26 family
Asalp_07070	COG0571	ribonuclease III activity
Asalp_07090	COG1381	Involved in DNA repair and RecF pathway recombination
Asalp_07100	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Asalp_07110	COG3023	N-Acetylmuramoyl-L-alanine amidase
Asalp_07120	COG4807	Protein conserved in bacteria
Asalp_07140	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Asalp_07150	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Asalp_07160	COG3956	TIGRFAM MazG family protein
Asalp_07170	COG0504	CTP synthase activity
Asalp_07180	COG0148	phosphopyruvate hydratase activity
Asalp_07190	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Asalp_07200	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Asalp_07220	COG0585	pseudouridine synthase activity
Asalp_07230	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Asalp_07240	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Asalp_07250	COG1238	metal cluster binding
Asalp_07260	COG4942	peptidase
Asalp_07260	COG1388	LysM domain
Asalp_07280	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Asalp_07290	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Asalp_07300	COG1610	YqeY-like protein
Asalp_07310	COG0358	DNA primase activity
Asalp_07320	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Asalp_07340	COG3039	Transposase
Asalp_07350	COG4584	PFAM Integrase catalytic
Asalp_07360	COG1484	DNA-dependent DNA replication
Asalp_07380	COG1538	Outer membrane efflux protein
Asalp_07400	COG3039	Transposase
Asalp_07430	COG4584	PFAM Integrase catalytic
Asalp_07440	COG1484	DNA-dependent DNA replication
Asalp_07470	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
Asalp_07510	COG4974	Belongs to the 'phage' integrase family
Asalp_07520	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
Asalp_07560	COG4974	Belongs to the 'phage' integrase family
Asalp_07570	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
Asalp_07580	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
Asalp_07600	COG1051	belongs to the nudix hydrolase family
Asalp_07620	COG3066	DNA modification
Asalp_07640	COG0335	large ribosomal subunit rRNA binding
Asalp_07650	COG0336	Belongs to the RNA methyltransferase TrmD family
Asalp_07660	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Asalp_07670	COG0228	four-way junction DNA binding
Asalp_07680	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Asalp_07690	COG4137	Cytochrome C assembly protein
Asalp_07700	COG4536	flavin adenine dinucleotide binding
Asalp_07710	COG1959	2 iron, 2 sulfur cluster binding
Asalp_07720	COG1017	nitric oxide dioxygenase activity
Asalp_07720	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Asalp_07730	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
Asalp_07740	COG0039	L-malate dehydrogenase activity
Asalp_07750	COG4160	amino acid transport
Asalp_07780	COG4215	(ABC) transporter
Asalp_07790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Asalp_07800	COG1126	abc transporter atp-binding protein
Asalp_07810	COG1438	arginine binding
Asalp_07820	COG2837	iron assimilation
Asalp_07830	COG3842	ATPase activity
Asalp_07850	COG1840	ABC-type Fe3 transport system, periplasmic component
Asalp_07860	COG0347	Belongs to the P(II) protein family
Asalp_07890	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Asalp_07930	COG1929	Belongs to the glycerate kinase type-1 family
Asalp_07940	COG2610	gluconate transmembrane transporter activity
Asalp_07950	COG3835	regulator
Asalp_07960	COG3112	Uncharacterised protein family (UPF0231)
Asalp_07990	COG0840	transmembrane signaling receptor activity
Asalp_08020	COG0513	Belongs to the DEAD box helicase family
Asalp_08100	COG1448	Aminotransferase
Asalp_08130	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
Asalp_08140	COG1328	CTP reductase activity
Asalp_08180	COG0793	Belongs to the peptidase S41A family
Asalp_08180	COG4946	Tricorn protease homolog
Asalp_08210	COG1215	transferase activity, transferring glycosyl groups
Asalp_08220	COG1649	PFAM Uncharacterised BCR, COG1649
Asalp_08220	COG0726	polysaccharide deacetylase
Asalp_08270	COG3397	chitin binding
Asalp_08300	COG0583	DNA-binding transcription factor activity
Asalp_08310	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Asalp_08320	COG4208	sulfate ABC transporter
Asalp_08330	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
Asalp_08350	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Asalp_08360	COG3174	membrane
Asalp_08370	COG0110	maltose O-acetyltransferase activity
Asalp_08400	COG3039	Transposase
Asalp_08440	COG0137	argininosuccinate synthase activity
Asalp_08460	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Asalp_08470	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
Asalp_08490	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
Asalp_08500	COG2072	flavoprotein involved in K transport
Asalp_08510	COG1393	Belongs to the ArsC family
Asalp_08520	COG0798	PFAM Bile acid sodium symporter
Asalp_08550	COG0640	Transcriptional regulator
Asalp_08560	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Asalp_08600	COG3068	Protein conserved in bacteria
Asalp_08620	COG0739	heme binding
Asalp_08660	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
Asalp_08670	COG1121	(ABC) transporter
Asalp_08680	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Asalp_08690	COG0583	DNA-binding transcription factor activity
Asalp_08710	COG1573	uracil-dna glycosylase
Asalp_08720	COG2962	Rard protein
Asalp_08740	COG2827	Endonuclease containing a URI domain
Asalp_08770	COG1842	Phage shock protein A
Asalp_08780	COG0204	Acyl-transferase
Asalp_08820	COG3118	belongs to the thioredoxin family
Asalp_08830	COG2259	Doxx family
Asalp_08980	COG2132	Multicopper oxidase
Asalp_09030	COG2217	Heavy metal translocating P-type atpase
Asalp_09060	COG2205	protein histidine kinase activity
Asalp_09070	COG0745	RESPONSE REGULATOR receiver
Asalp_09090	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Asalp_09100	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Asalp_09110	COG1538	Outer membrane efflux protein
Asalp_09130	COG3039	Transposase
Asalp_09230	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Asalp_09250	COG0583	DNA-binding transcription factor activity
Asalp_09260	COG0640	Transcriptional regulator
Asalp_09270	COG0268	Binds directly to 16S ribosomal RNA
Asalp_09280	COG0728	peptidoglycan biosynthetic process
Asalp_09290	COG0196	riboflavin kinase activity
Asalp_09300	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Asalp_09310	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Asalp_09320	COG1047	Peptidyl-prolyl cis-trans
Asalp_09330	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Asalp_09450	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Asalp_09450	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Asalp_09480	COG1854	S-ribosylhomocysteine lyase activity
Asalp_09490	COG3706	GGDEF domain
Asalp_09500	COG0557	exoribonuclease II activity
Asalp_09510	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Asalp_09530	COG2153	protein acetylation
Asalp_09570	COG1914	H( )-stimulated, divalent metal cation uptake system
Asalp_09580	COG0360	Binds together with S18 to 16S ribosomal RNA
Asalp_09590	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Asalp_09600	COG0359	binds to the 23S rRNA
Asalp_09660	COG1064	alcohol dehydrogenase
Asalp_09670	COG1238	metal cluster binding
Asalp_09680	COG0612	Peptidase, M16
Asalp_09690	COG2918	glutathione biosynthetic process
Asalp_09710	COG1022	Amp-dependent synthetase and ligase
Asalp_09730	COG0456	acetyltransferase
Asalp_09800	COG5001	Diguanylate cyclase
Asalp_09800	COG3300	MHYT domain
Asalp_09810	COG0745	RESPONSE REGULATOR receiver
Asalp_09810	COG3706	GGDEF domain
Asalp_09820	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Asalp_09840	COG1902	pentaerythritol trinitrate reductase activity
Asalp_09860	COG0442	prolyl-tRNA aminoacylation
Asalp_09870	COG0840	transmembrane signaling receptor activity
Asalp_09880	COG0632	four-way junction helicase activity
Asalp_09890	COG2255	four-way junction helicase activity
Asalp_09900	COG1271	oxidase subunit
Asalp_09910	COG1294	oxidase, subunit
Asalp_09920	COG4890	Cyd operon protein YbgT
Asalp_09930	COG3790	cyd operon protein YbgE
Asalp_09940	COG0824	Thioesterase
Asalp_09950	COG0811	peptide transport
Asalp_09980	COG0823	Involved in the tonB-independent uptake of proteins
Asalp_09990	COG2885	chlorophyll binding
Asalp_10000	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
Asalp_10010	COG0840	transmembrane signaling receptor activity
Asalp_10020	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Asalp_10040	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Asalp_10050	COG1640	4-alpha-glucanotransferase
Asalp_10060	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
Asalp_10100	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Asalp_10110	COG4991	sh3 domain protein
Asalp_10120	COG0506	proline dehydrogenase activity
Asalp_10120	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Asalp_10120	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Asalp_10140	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Asalp_10150	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Asalp_10160	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Asalp_10170	COG0163	prenyltransferase activity
Asalp_10200	COG1131	(ABC) transporter
Asalp_10210	COG0842	Transport permease protein
Asalp_10230	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Asalp_10240	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Asalp_10250	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Asalp_10260	COG0617	tRNA 3'-terminal CCA addition
Asalp_10270	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Asalp_10280	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Asalp_10290	COG1489	DNA binding
Asalp_10310	COG1643	Atp-dependent helicase
Asalp_10320	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Asalp_10330	COG0346	lactoylglutathione lyase activity
Asalp_10350	COG2076	Multidrug Resistance protein
Asalp_10360	COG0583	DNA-binding transcription factor activity
Asalp_10370	COG3437	response regulator, receiver
Asalp_10370	COG0784	Response regulator, receiver
Asalp_10390	COG0671	phosphoesterase, PA-phosphatase related
Asalp_10420	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Asalp_10430	COG0038	chloride channel
Asalp_10450	COG0316	Belongs to the HesB IscA family
Asalp_10470	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Asalp_10490	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
Asalp_10500	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
Asalp_10510	COG1178	ABC-type Fe3 transport system permease component
Asalp_10520	COG4143	(ABC) transporter
Asalp_10560	COG0066	3-isopropylmalate dehydratase activity
Asalp_10570	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Asalp_10580	COG0473	3-isopropylmalate dehydrogenase activity
Asalp_10590	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Asalp_10610	COG0671	phosphoesterase, PA-phosphatase related
Asalp_10640	COG0028	Belongs to the TPP enzyme family
Asalp_10650	COG0440	acetolactate synthase activity
Asalp_10660	COG0280	phosphate acetyltransferase
Asalp_10660	COG0857	belongs to the CobB CobQ family
Asalp_10670	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Asalp_10680	COG3092	negative regulation of chromosome organization
Asalp_10690	COG3013	Belongs to the UPF0304 family
Asalp_10700	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Asalp_10710	COG2716	regulation of RNA biosynthetic process
Asalp_10730	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
Asalp_10740	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Asalp_10810	COG2198	Histidine kinase
Asalp_10810	COG5002	protein histidine kinase activity
Asalp_10810	COG0784	Response regulator, receiver
Asalp_10860	COG5433	transposase activity
Asalp_10870	COG0840	transmembrane signaling receptor activity
Asalp_10900	COG1464	Belongs to the NlpA lipoprotein family
Asalp_10910	COG2011	ABC-type metal ion transport system permease component
Asalp_10960	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Asalp_10960	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Asalp_10970	COG0802	atpase or kinase
Asalp_11000	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Asalp_11010	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Asalp_11020	COG1923	regulation of RNA biosynthetic process
Asalp_11030	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Asalp_11040	COG0330	HflC and HflK could
Asalp_11050	COG0330	HflC and HflK could
Asalp_11060	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
Asalp_11070	COG0142	geranyltranstransferase activity
Asalp_11080	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Asalp_11090	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Asalp_11100	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Asalp_11120	COG0318	PFAM AMP-dependent synthetase and ligase
Asalp_11170	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Asalp_11200	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Asalp_11220	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Asalp_11230	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Asalp_11250	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
Asalp_11260	COG3178	'Phosphotransferase
Asalp_11270	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Asalp_11280	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
Asalp_11290	COG2252	PERMEase
Asalp_11310	COG0488	(ABC) transporter
Asalp_11320	COG0741	lytic transglycosylase activity
Asalp_11360	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Asalp_11380	COG3721	Heme iron utilization protein
Asalp_11390	COG0748	coenzyme F420 binding
Asalp_11430	COG4771	TonB-dependent receptor
Asalp_11450	COG2814	Major facilitator Superfamily
Asalp_11470	COG3655	Transcriptional regulator
Asalp_11490	COG2202	Pas domain
Asalp_11490	COG2205	protein histidine kinase activity
Asalp_11520	COG3397	chitin binding
Asalp_11530	COG2226	methyltransferase
Asalp_11540	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Asalp_11550	COG1765	OsmC-like protein
Asalp_11580	COG3954	Phosphoribulokinase
Asalp_11590	COG2076	Multidrug Resistance protein
Asalp_11600	COG2076	Multidrug Resistance protein
Asalp_11610	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Asalp_11620	COG0726	polysaccharide deacetylase
Asalp_11630	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Asalp_11630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Asalp_11640	COG0463	Glycosyl transferase, family 2
Asalp_11650	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Asalp_11670	COG3089	Belongs to the UPF0270 family
Asalp_11680	COG5001	Diguanylate cyclase
Asalp_11680	COG4251	negative regulation of phosphorylation
Asalp_11680	COG3706	GGDEF domain
Asalp_11680	COG2203	Gaf domain
Asalp_11690	COG0429	hydrolase of the alpha beta-hydrolase fold
Asalp_11700	COG0835	chemotaxis
Asalp_11700	COG0784	Response regulator, receiver
Asalp_11720	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
Asalp_11730	COG1047	Peptidyl-prolyl cis-trans
Asalp_11750	COG2900	Belongs to the SlyX family
Asalp_11770	COG0545	Peptidyl-prolyl cis-trans isomerase
Asalp_11780	COG2204	response regulator
Asalp_11820	COG0737	Belongs to the 5'-nucleotidase family
Asalp_11830	COG2200	EAL domain
Asalp_11870	COG0305	Participates in initiation and elongation during chromosome replication
Asalp_11880	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Asalp_11890	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Asalp_11910	COG3385	transposase activity
Asalp_11950	COG3188	usher protein
Asalp_11970	COG3039	Transposase
Asalp_11980	COG2197	response regulator
Asalp_12010	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Asalp_12020	COG2201	protein-glutamate methylesterase activity
Asalp_12030	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
Asalp_12050	COG0840	transmembrane signaling receptor activity
Asalp_12060	COG0835	chemotaxis
Asalp_12080	COG0643	Histidine kinase
Asalp_12080	COG2198	Histidine kinase
Asalp_12100	COG0745	RESPONSE REGULATOR receiver
Asalp_12110	COG0840	transmembrane signaling receptor activity
Asalp_12140	COG1280	lysine exporter protein (LysE YggA)
Asalp_12150	COG0826	peptidase U32
Asalp_12170	COG3813	Protein conserved in bacteria
Asalp_12190	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Asalp_12220	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
Asalp_12270	COG0300	oxidoreductase activity
Asalp_12320	COG2133	pyrroloquinoline quinone binding
Asalp_12360	COG3385	transposase activity
Asalp_12370	COG0077	Prephenate dehydratase
Asalp_12370	COG1605	Chorismate mutase
Asalp_12430	COG3272	Protein of unknown function (DUF1722)
Asalp_12440	COG0789	Transcriptional regulator
Asalp_12450	COG0415	Belongs to the DNA photolyase family
Asalp_12470	COG0300	oxidoreductase activity
Asalp_12500	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Asalp_12550	COG0783	Belongs to the Dps family
Asalp_12560	COG1151	hydroxylamine reductase activity
Asalp_12580	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Asalp_12590	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Asalp_12590	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Asalp_12630	COG0348	domain, Protein
Asalp_12630	COG3901	Regulator of nitric oxide reductase transcription
Asalp_12640	COG4263	nitrous-oxide reductase activity
Asalp_12670	COG3039	Transposase
Asalp_12700	COG3385	transposase activity
Asalp_12740	COG3459	Glycosyltransferase 36 associated
Asalp_12790	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
Asalp_12800	COG1666	GTP binding
Asalp_12810	COG3248	Nucleoside-binding outer membrane protein
Asalp_12820	COG2211	Major facilitator Superfamily
Asalp_12840	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Asalp_12860	COG2813	Specifically methylates the guanine in position
Asalp_12880	COG0271	Belongs to the BolA IbaG family
Asalp_12900	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
Asalp_12910	COG1805	sodium ion transport
Asalp_12920	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
Asalp_12930	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
Asalp_12940	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
Asalp_12950	COG2871	sodium ion transport
Asalp_12960	COG1477	protein flavinylation
Asalp_12990	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Asalp_13000	COG0840	transmembrane signaling receptor activity
Asalp_13010	COG0583	DNA-binding transcription factor activity
Asalp_13030	COG2363	Small membrane protein
Asalp_13040	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
Asalp_13060	COG0473	3-isopropylmalate dehydrogenase activity
Asalp_13070	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Asalp_13080	COG1611	Belongs to the LOG family
Asalp_13090	COG3706	GGDEF domain
Asalp_13110	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Asalp_13110	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Asalp_13130	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
Asalp_13180	COG3098	single-species biofilm formation
Asalp_13190	COG0564	pseudouridine synthase activity
Asalp_13210	COG3039	Transposase
Asalp_13220	COG3039	Transposase
Asalp_13230	COG4580	involved in the transport of maltose and maltodextrins
Asalp_13250	COG1263	PTS System
Asalp_13250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
Asalp_13270	COG2171	N-acyltransferase activity
Asalp_13280	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
Asalp_13290	COG0024	Methionine aminopeptidase
Asalp_13300	COG0052	Belongs to the universal ribosomal protein uS2 family
Asalp_13310	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Asalp_13320	COG0528	UMP kinase activity
Asalp_13330	COG0233	cytoplasmic translational termination
Asalp_13340	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Asalp_13350	COG0575	Belongs to the CDS family
Asalp_13360	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Asalp_13370	COG0750	zinc metalloprotease
Asalp_13400	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Asalp_13410	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Asalp_13420	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Asalp_13430	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Asalp_13440	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Asalp_13460	COG0825	malonyl-CoA metabolic process
Asalp_13470	COG3710	Transcriptional regulator
Asalp_13480	COG0531	amino acid
Asalp_13490	COG1982	Orn Lys Arg decarboxylase major
Asalp_13500	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
Asalp_13530	COG0814	amino acid
Asalp_13540	COG0531	amino acid
Asalp_13560	COG0488	(ABC) transporter
Asalp_13570	COG3385	transposase activity
Asalp_13590	COG3590	peptidase
Asalp_13600	COG0037	tRNA processing
Asalp_13610	COG3706	GGDEF domain
Asalp_13690	COG0366	Alpha amylase catalytic
Asalp_13710	COG1881	PFAM PEBP family protein
Asalp_13730	COG0583	DNA-binding transcription factor activity
Asalp_13750	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
Asalp_13770	COG0583	DNA-binding transcription factor activity
Asalp_13780	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_13790	COG0616	signal peptide processing
Asalp_13800	COG3724	N-succinylarginine dihydrolase activity
Asalp_13810	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Asalp_13840	COG0840	transmembrane signaling receptor activity
Asalp_13860	COG2971	BadF BadG BcrA BcrD
Asalp_13880	COG4608	Belongs to the ABC transporter superfamily
Asalp_13890	COG0444	Belongs to the ABC transporter superfamily
Asalp_13900	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Asalp_13930	COG0784	Response regulator, receiver
Asalp_13930	COG2205	protein histidine kinase activity
Asalp_13970	COG3220	belongs to the UPF0276 family
Asalp_14020	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Asalp_14030	COG1289	transmembrane transporter activity
Asalp_14040	COG0303	'Molybdopterin
Asalp_14050	COG0746	molybdenum cofactor guanylyltransferase activity
Asalp_14070	COG4662	Binding-protein-dependent transport system inner membrane component
Asalp_14090	COG2204	response regulator
Asalp_14100	COG3852	Histidine kinase
Asalp_14120	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Asalp_14220	COG3383	formate dehydrogenase (NAD+) activity
Asalp_14220	COG3383	formate dehydrogenase (NAD+) activity
Asalp_14230	COG0437	4 iron, 4 sulfur cluster binding
Asalp_14260	COG0281	malic enzyme
Asalp_14280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Asalp_14320	COG3264	Mechanosensitive ion channel
Asalp_14320	COG1196	nuclear chromosome segregation
Asalp_14330	COG0469	pyruvate kinase activity
Asalp_14360	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Asalp_14360	COG4651	solute:proton antiporter activity
Asalp_14370	COG0405	Gamma-glutamyltransferase
Asalp_14380	COG2974	May be involved in recombination
Asalp_14400	COG0420	3'-5' exonuclease activity
Asalp_14410	COG0419	ATPase involved in DNA repair
Asalp_14420	COG3038	cytochrome b561
Asalp_14440	COG3706	GGDEF domain
Asalp_14450	COG2190	(PTS) system
Asalp_14470	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Asalp_14480	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Asalp_14520	COG1720	tRNA m6t6A37 methyltransferase activity
Asalp_14560	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
Asalp_14570	COG4988	ABC transporter
Asalp_14580	COG0745	RESPONSE REGULATOR receiver
Asalp_14610	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Asalp_14640	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
Asalp_14660	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
Asalp_14680	COG0083	homoserine kinase activity
Asalp_14690	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Asalp_14740	COG5433	transposase activity
Asalp_14780	COG3384	dioxygenase
Asalp_14810	COG0531	amino acid
Asalp_14830	COG0531	amino acid
Asalp_14860	COG1917	Cupin 2, conserved barrel domain protein
Asalp_14860	COG1396	sequence-specific DNA binding
Asalp_14870	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Asalp_14940	COG2916	Histone family protein nucleoid-structuring protein H-NS
Asalp_14950	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Asalp_14960	COG2375	cellular response to nickel ion
Asalp_14970	COG1538	Outer membrane efflux protein
Asalp_14980	COG0577	efflux transmembrane transporter activity
Asalp_14980	COG1136	(ABC) transporter
Asalp_14990	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Asalp_15010	COG1227	inorganic diphosphatase activity
Asalp_15020	COG0497	DNA recombination
Asalp_15030	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Asalp_15040	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Asalp_15050	COG0443	Heat shock 70 kDa protein
Asalp_15060	COG0484	heat shock protein binding
Asalp_15120	COG1285	pathogenesis
Asalp_15150	COG0640	Transcriptional regulator
Asalp_15210	COG0095	Lipoate-protein ligase
Asalp_15230	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Asalp_15240	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Asalp_15300	COG0708	Exodeoxyribonuclease III
Asalp_15420	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Asalp_15430	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Asalp_15440	COG1845	cytochrome c oxidase, subunit III
Asalp_15450	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Asalp_15460	COG0109	protoheme IX farnesyltransferase activity
Asalp_15470	COG2814	Major facilitator Superfamily
Asalp_15520	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Asalp_15560	COG2207	Transcriptional regulator
Asalp_15570	COG0538	isocitrate dehydrogenase activity
Asalp_15590	COG3048	D-serine ammonia-lyase activity
Asalp_15600	COG2610	gluconate transmembrane transporter activity
Asalp_15610	COG0583	DNA-binding transcription factor activity
Asalp_15620	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Asalp_15670	COG4804	nuclease activity
Asalp_15710	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Asalp_15730	COG1715	Restriction endonuclease
Asalp_15830	COG2003	Belongs to the UPF0758 family
Asalp_15940	COG3311	Transcriptional regulator
Asalp_15960	COG2916	Histone family protein nucleoid-structuring protein H-NS
Asalp_15970	COG0582	viral genome integration into host DNA
Asalp_15980	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Asalp_15990	COG2867	negative regulation of translational initiation
Asalp_16010	COG0702	epimerase
Asalp_16020	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Asalp_16080	COG4964	Belongs to the GSP D family
Asalp_16100	COG2894	cell division
Asalp_16180	COG1454	alcohol dehydrogenase
Asalp_16210	COG1957	nucleoside hydrolase
Asalp_16250	COG0840	transmembrane signaling receptor activity
Asalp_16260	COG1280	lysine exporter protein (LysE YggA)
Asalp_16300	COG3263	regulation of cellular component size
Asalp_16320	COG1876	peptidase activity
Asalp_16330	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Asalp_16340	COG1393	Belongs to the ArsC family
Asalp_16350	COG0583	DNA-binding transcription factor activity
Asalp_16380	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
Asalp_16390	COG0017	Asparaginyl-tRNA synthetase
Asalp_16440	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Asalp_16450	COG0156	8-amino-7-oxononanoate synthase activity
Asalp_16460	COG2226	methyltransferase
Asalp_16460	COG1073	alpha beta
Asalp_16470	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
Asalp_16480	COG0501	Belongs to the peptidase M48B family
Asalp_16500	COG0633	Ferredoxin
Asalp_16500	COG3217	Mosc domain protein beta barrel domain protein
Asalp_16500	COG3217	Mosc domain protein beta barrel domain protein
Asalp_16500	COG0633	Ferredoxin
Asalp_16530	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Asalp_16530	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Asalp_16530	COG1013	pyruvate-flavodoxin oxidoreductase activity
Asalp_16530	COG0674	pyruvate-flavodoxin oxidoreductase activity
Asalp_16540	COG2841	Protein conserved in bacteria
Asalp_16560	COG0534	Mate efflux family protein
Asalp_16640	COG1309	transcriptional regulator
Asalp_16670	COG0791	NLP P60 protein
Asalp_16690	COG0583	DNA-binding transcription factor activity
Asalp_16700	COG0450	alkyl hydroperoxide reductase
Asalp_16740	COG0500	methyltransferase
Asalp_16750	COG4106	trans-aconitate 2-methyltransferase activity
Asalp_16760	COG1801	Protein of unknown function DUF72
Asalp_16770	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Asalp_16780	COG0217	transcriptional regulatory protein
Asalp_16790	COG2194	sulfuric ester hydrolase activity
Asalp_16800	COG1846	Transcriptional regulator
Asalp_16800	COG1940	carbohydrate kinase activity
Asalp_16810	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
Asalp_16820	COG0363	glucosamine-6-phosphate deaminase activity
Asalp_16830	COG1263	PTS System
Asalp_16830	COG2190	(PTS) system
Asalp_16830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
Asalp_16860	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Asalp_16870	COG0735	belongs to the Fur family
Asalp_16890	COG0716	FMN binding
Asalp_16920	COG0596	Alpha beta hydrolase
Asalp_16930	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
Asalp_16940	COG0033	Phosphoglucomutase
Asalp_16960	COG1846	Transcriptional regulator
Asalp_16970	COG2951	lytic endotransglycosylase activity
Asalp_16980	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Asalp_16990	COG4136	ATPase activity
Asalp_17000	COG4135	transport system, permease component
Asalp_17010	COG4134	Bacterial extracellular solute-binding protein
Asalp_17030	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Asalp_17050	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Asalp_17060	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Asalp_17080	COG0729	surface antigen
Asalp_17090	COG2911	Protein conserved in bacteria
Asalp_17110	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
Asalp_17160	COG1607	acyl-coa hydrolase
Asalp_17180	COG3021	interspecies interaction between organisms
Asalp_17190	COG0741	lytic transglycosylase activity
Asalp_17190	COG1388	LysM domain
Asalp_17200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Asalp_17210	COG2226	methyltransferase
Asalp_17220	COG0328	RNA-DNA hybrid ribonuclease activity
Asalp_17230	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Asalp_17250	COG3437	response regulator, receiver
Asalp_17250	COG0784	Response regulator, receiver
Asalp_17260	COG1960	acyl-CoA dehydrogenase activity
Asalp_17270	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
Asalp_17280	COG0121	glutamine amidotransferase
Asalp_17350	COG2197	response regulator
Asalp_17360	COG3850	Histidine kinase
Asalp_17370	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Asalp_17380	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Asalp_17380	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
Asalp_17400	COG0243	molybdopterin cofactor binding
Asalp_17410	COG0437	4 iron, 4 sulfur cluster binding
Asalp_17420	COG0348	domain, Protein
Asalp_17440	COG3005	denitrification pathway
Asalp_17450	COG0521	Mo-molybdopterin cofactor biosynthetic process
Asalp_17460	COG0315	cyclic pyranopterin monophosphate synthase activity
Asalp_17470	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
Asalp_17480	COG0314	molybdopterin synthase activity
Asalp_17510	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
Asalp_17520	COG0596	Alpha beta hydrolase
Asalp_17540	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Asalp_17550	COG0303	'Molybdopterin
Asalp_17560	COG0302	gtp cyclohydrolase
Asalp_17580	COG0840	transmembrane signaling receptor activity
Asalp_17590	COG2759	Belongs to the formate--tetrahydrofolate ligase family
Asalp_17610	COG0583	DNA-binding transcription factor activity
Asalp_17670	COG2195	Cleaves the N-terminal amino acid of tripeptides
Asalp_17680	COG1166	arginine decarboxylase activity
Asalp_17750	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Asalp_17810	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Asalp_17840	COG1484	DNA-dependent DNA replication
Asalp_17880	COG2807	transmembrane transport
Asalp_17900	COG0583	DNA-binding transcription factor activity
Asalp_17940	COG2979	Protein of unknown function (DUF533)
Asalp_17980	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Asalp_18000	COG1294	oxidase, subunit
Asalp_18020	COG2814	Major facilitator Superfamily
Asalp_18030	COG0656	L-ascorbic acid biosynthetic process
Asalp_18040	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
Asalp_18100	COG0583	DNA-binding transcription factor activity
Asalp_18120	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Asalp_18130	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Asalp_18140	COG2271	Major facilitator Superfamily
Asalp_18150	COG1349	DNA-binding transcription factor activity
Asalp_18170	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
Asalp_18180	COG0584	glycerophosphoryl diester phosphodiesterase
Asalp_18190	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Asalp_18200	COG1605	Chorismate mutase
Asalp_18200	COG0287	Prephenate dehydrogenase
Asalp_18210	COG0583	DNA-binding transcription factor activity
Asalp_18220	COG3085	chromosome segregation
Asalp_18230	COG4574	serine-type endopeptidase inhibitor activity
Asalp_18270	COG1770	oligopeptidase
Asalp_18280	COG4771	TonB-dependent receptor
Asalp_18290	COG3083	sulfuric ester hydrolase activity
Asalp_18300	COG3082	Protein of unknown function (DUF1414)
Asalp_18310	COG3081	Nucleoid-associated protein
Asalp_18330	COG1175	transmembrane transport
Asalp_18350	COG3842	ATPase activity
Asalp_18390	COG0425	Belongs to the sulfur carrier protein TusA family
Asalp_18400	COG4783	chaperone-mediated protein folding
Asalp_18420	COG1393	Belongs to the ArsC family
Asalp_18440	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
Asalp_18450	COG2431	L-lysine efflux transmembrane transporter activity
Asalp_18480	COG4215	(ABC) transporter
Asalp_18520	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
Asalp_18540	COG0446	pyridine nucleotide-disulphide oxidoreductase
Asalp_18550	COG2373	Large extracellular alpha-helical protein
Asalp_18560	COG4953	penicillin-binding protein 1C
Asalp_18580	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Asalp_18580	COG0301	tRNA thio-modification
Asalp_18610	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
Asalp_18680	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Asalp_18700	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Asalp_18750	COG0483	inositol monophosphate 1-phosphatase activity
Asalp_18770	COG0625	glutathione transferase activity
Asalp_18790	COG0601	transmembrane transport
Asalp_18800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Asalp_18810	COG0444	Belongs to the ABC transporter superfamily
Asalp_18820	COG2814	Major facilitator Superfamily
Asalp_18830	COG0583	DNA-binding transcription factor activity
Asalp_18840	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Asalp_18850	COG0243	molybdopterin cofactor binding
Asalp_18880	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Asalp_18890	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Asalp_18910	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Asalp_18920	COG0509	glycine decarboxylation via glycine cleavage system
Asalp_18930	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Asalp_18930	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Asalp_19000	COG2351	hydroxyisourate hydrolase activity
Asalp_19040	COG3634	alkyl hydroperoxide reductase activity
Asalp_19050	COG0450	alkyl hydroperoxide reductase
Asalp_19060	COG0517	IMP dehydrogenase activity
Asalp_19070	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Asalp_19080	COG0343	queuine tRNA-ribosyltransferase activity
Asalp_19090	COG1862	Preprotein translocase
Asalp_19100	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Asalp_19110	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Asalp_19190	COG1959	2 iron, 2 sulfur cluster binding
Asalp_19200	COG1104	cysteine desulfurase activity
Asalp_19210	COG0822	iron-sulfur transferase activity
Asalp_19240	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
Asalp_19250	COG0443	Heat shock 70 kDa protein
Asalp_19260	COG0633	Ferredoxin
Asalp_19280	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Asalp_19290	COG0105	UTP biosynthetic process
Asalp_19300	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Asalp_19320	COG1426	Protein conserved in bacteria
Asalp_19340	COG0124	histidyl-tRNA synthetase
Asalp_19350	COG2976	Protein conserved in bacteria
Asalp_19360	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Asalp_19370	COG1160	GTP binding
Asalp_19380	COG1645	bacterial-type flagellum-dependent swarming motility
Asalp_19400	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
Asalp_19420	COG0047	phosphoribosylformylglycinamidine synthase activity
Asalp_19420	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Asalp_19450	COG2354	Protein conserved in bacteria
Asalp_19490	COG1252	NADH dehydrogenase
Asalp_19500	COG0393	Putative heavy-metal-binding
Asalp_19520	COG1619	proteins homologs of microcin C7 resistance protein MccF
Asalp_19530	COG1368	sulfuric ester hydrolase activity
Asalp_19550	COG0527	aspartate kinase activity
Asalp_19560	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
Asalp_19560	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Asalp_19570	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Asalp_19620	COG0596	Alpha beta hydrolase
Asalp_19650	COG1285	pathogenesis
Asalp_19700	COG1136	(ABC) transporter
Asalp_19730	COG2814	Major facilitator Superfamily
Asalp_19770	COG0672	)-iron permease
Asalp_19820	COG0659	secondary active sulfate transmembrane transporter activity
Asalp_19840	COG3501	Rhs element vgr protein
Asalp_19880	COG3039	Transposase
Asalp_19960	COG3550	peptidyl-serine autophosphorylation
Asalp_20110	COG1484	DNA-dependent DNA replication
Asalp_20120	COG4584	PFAM Integrase catalytic
Asalp_20150	COG0675	Transposase, IS605 OrfB family
Asalp_20200	COG3039	Transposase
Asalp_20240	COG1205	dead DEAH box helicase
Asalp_20240	COG1111	helicase
Asalp_20250	COG0210	DNA helicase
Asalp_20330	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Asalp_20350	COG5433	transposase activity
Asalp_20380	COG0531	amino acid
Asalp_20530	COG0469	pyruvate kinase activity
Asalp_20540	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
Asalp_20550	COG1085	galactose-1-phosphate uridylyltransferase
Asalp_20560	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Asalp_20570	COG1609	Transcriptional regulator
Asalp_20600	COG4584	PFAM Integrase catalytic
Asalp_20610	COG1484	DNA-dependent DNA replication
Asalp_20640	COG0625	glutathione transferase activity
Asalp_20680	COG4584	PFAM Integrase catalytic
Asalp_20740	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Asalp_20750	COG0513	Belongs to the DEAD box helicase family
Asalp_20770	COG4104	PAAR repeat-containing protein
Asalp_20800	COG0789	Transcriptional regulator
Asalp_20830	COG0493	'glutamate synthase
Asalp_20840	COG0069	glutamate synthase activity
Asalp_20840	COG0067	glutamate synthase
Asalp_20840	COG0070	glutamate synthase
Asalp_20940	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
Asalp_20950	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Asalp_20950	COG0574	Belongs to the PEP-utilizing enzyme family
Asalp_21050	COG1464	Belongs to the NlpA lipoprotein family
Asalp_21060	COG0671	phosphoesterase, PA-phosphatase related
Asalp_21070	COG3039	Transposase
Asalp_21080	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Asalp_21090	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
Asalp_21110	COG0101	tRNA pseudouridine synthase activity
Asalp_21120	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Asalp_21130	COG0285	dihydrofolate synthase activity
Asalp_21150	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
Asalp_21160	COG2920	part of a sulfur-relay system
Asalp_21170	COG1289	transmembrane transporter activity
Asalp_21180	COG0670	Belongs to the BI1 family
Asalp_21190	COG3012	SEC-C Motif Domain Protein
Asalp_21190	COG3318	Belongs to the UPF0149 family
Asalp_21210	COG3039	Transposase
Asalp_21230	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Asalp_21330	COG2003	Belongs to the UPF0758 family
Asalp_21420	COG4983	Phage plasmid primase, P4 family domain protein
Asalp_21460	COG4584	PFAM Integrase catalytic
Asalp_21470	COG1484	DNA-dependent DNA replication
Asalp_21500	COG3501	Rhs element vgr protein
Asalp_21570	COG5433	transposase activity
Asalp_21590	COG4589	Belongs to the CDS family
Asalp_21680	COG3188	usher protein
Asalp_21740	COG0582	viral genome integration into host DNA
Asalp_21750	COG0840	transmembrane signaling receptor activity
Asalp_21760	COG5001	Diguanylate cyclase
Asalp_21770	COG0564	pseudouridine synthase activity
Asalp_21810	COG4584	PFAM Integrase catalytic
Asalp_21820	COG1484	DNA-dependent DNA replication
Asalp_21850	COG2223	nitrite transmembrane transporter activity
Asalp_21860	COG3250	beta-galactosidase activity
Asalp_21880	COG2226	methyltransferase
Asalp_21910	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Asalp_21920	COG1278	Cold shock
Asalp_21930	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Asalp_21940	COG0542	response to heat
Asalp_21950	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Asalp_21960	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
Asalp_21970	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Asalp_21980	COG3134	Outer membrane lipoprotein
Asalp_21990	COG3706	GGDEF domain
Asalp_22000	COG0492	ferredoxin-NADP+ reductase activity
Asalp_22020	COG3039	Transposase
Asalp_22050	COG0531	amino acid
Asalp_22050	COG1674	ftsk spoiiie
Asalp_22060	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Asalp_22070	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Asalp_22080	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Asalp_22090	COG1286	toxin biosynthetic process
Asalp_22100	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
Asalp_22120	COG4172	Belongs to the ABC transporter superfamily
Asalp_22130	COG4172	Belongs to the ABC transporter superfamily
Asalp_22140	COG4171	peptide transport system, permease
Asalp_22150	COG4168	peptide transport system, permease
Asalp_22170	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
Asalp_22180	COG1842	Phage shock protein A
Asalp_22210	COG3106	COG3106 Predicted ATPase
Asalp_22220	COG3768	UPF0283 membrane protein
Asalp_22240	COG2154	pterin-4-alpha-carbinolamine dehydratase
Asalp_22270	COG5001	Diguanylate cyclase
Asalp_22270	COG5002	protein histidine kinase activity
Asalp_22270	COG3447	MASE1 domain protein
Asalp_22320	COG1022	Amp-dependent synthetase and ligase
Asalp_22330	COG0295	cytidine deaminase activity
Asalp_22350	COG1346	cytolysis
Asalp_22360	COG1380	Effector of murein hydrolase LrgA
Asalp_22370	COG3345	alpha-galactosidase
Asalp_22390	COG2925	Exonuclease
Asalp_22420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Asalp_22430	COG0436	Aminotransferase
Asalp_22440	COG0583	DNA-binding transcription factor activity
Asalp_22450	COG2160	L-arabinose isomerase activity
Asalp_22470	COG1069	ribulokinase activity
Asalp_22480	COG1879	ABC-type sugar transport system periplasmic component
Asalp_22490	COG1129	ABC transporter
Asalp_22500	COG1172	Belongs to the binding-protein-dependent transport system permease family
Asalp_22520	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Asalp_22530	COG0254	rRNA binding
Asalp_22560	COG1451	nucleotide metabolic process
Asalp_22590	COG3069	C4-dicarboxylate transmembrane transporter activity
Asalp_22610	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Asalp_22610	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Asalp_22620	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Asalp_22660	COG2009	succinate dehydrogenase
Asalp_22670	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
Asalp_22680	COG1053	succinate dehydrogenase
Asalp_22700	COG0567	Dehydrogenase, E1 component
Asalp_22710	COG0508	dehydrogenase complex catalyzes the overall conversion of
Asalp_22720	COG0045	succinate-CoA ligase (ADP-forming) activity
Asalp_22730	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Asalp_22770	COG1882	Formate acetyltransferase
Asalp_22780	COG2116	formate transmembrane transporter activity
Asalp_22790	COG1944	ATP diphosphatase activity
Asalp_22800	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
Asalp_22810	COG0612	Peptidase, M16
Asalp_22840	COG0589	response to stress
Asalp_22850	COG3039	Transposase
Asalp_22870	COG2910	NAD(P)H-binding
Asalp_22880	COG0583	DNA-binding transcription factor activity
Asalp_22900	COG3708	Transcriptional regulator
Asalp_22900	COG2207	Transcriptional regulator
Asalp_22910	COG4774	siderophore transport
Asalp_22930	COG0583	DNA-binding transcription factor activity
Asalp_22940	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Asalp_22960	COG0517	IMP dehydrogenase activity
Asalp_22990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Asalp_23000	COG3046	protein related to deoxyribodipyrimidine photolyase
Asalp_23020	COG3033	Beta-eliminating lyase
Asalp_23050	COG4235	cytochrome complex assembly
Asalp_23050	COG3088	subunit of a heme lyase
Asalp_23080	COG3301	Polysulphide reductase, NrfD
Asalp_23090	COG0437	4 iron, 4 sulfur cluster binding
Asalp_23100	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
Asalp_23120	COG0247	lactate metabolic process
Asalp_23130	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
Asalp_23140	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
Asalp_23150	COG3012	SEC-C Motif Domain Protein
Asalp_23160	COG0840	transmembrane signaling receptor activity
Asalp_23170	COG1940	carbohydrate kinase activity
Asalp_23170	COG1846	Transcriptional regulator
Asalp_23180	COG3290	protein histidine kinase activity
Asalp_23190	COG4565	transcriptional regulatory protein
Asalp_23240	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
Asalp_23250	COG2985	domain, Protein
Asalp_23250	COG0569	domain protein
Asalp_23260	COG0556	nucleotide-excision repair
Asalp_23280	COG0586	Pfam SNARE associated Golgi protein
Asalp_23300	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
Asalp_23320	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Asalp_23340	COG2719	SpoVR family
Asalp_23360	COG2766	serine protein kinase
Asalp_23370	COG0514	ATP-dependent DNA helicase (RecQ)
Asalp_23380	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
Asalp_23390	COG0814	amino acid
Asalp_23410	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Asalp_23470	COG0058	SHG alpha-glucan phosphorylase activity
Asalp_23480	COG0471	metal ion transport
Asalp_23490	COG3118	belongs to the thioredoxin family
Asalp_23510	COG1132	(ABC) transporter
Asalp_23520	COG1132	(ABC) transporter
Asalp_23540	COG2501	S4 domain
Asalp_23600	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
Asalp_23610	COG2329	Antibiotic biosynthesis monooxygenase
Asalp_23690	COG1742	UPF0060 membrane protein
Asalp_23720	COG0513	Belongs to the DEAD box helicase family
Asalp_23730	COG0386	Belongs to the glutathione peroxidase family
Asalp_23750	COG1181	Belongs to the D-alanine--D-alanine ligase family
Asalp_23780	COG0730	response to heat
Asalp_23790	COG0583	DNA-binding transcription factor activity
Asalp_23820	COG3593	DNA synthesis involved in DNA repair
Asalp_23870	COG1011	Hydrolase
Asalp_23880	COG1473	amidohydrolase
Asalp_23900	COG0205	6-phosphofructokinase activity
Asalp_23920	COG1434	Gram-negative-bacterium-type cell wall biogenesis
Asalp_23930	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Asalp_23950	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
Asalp_23960	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
Asalp_24050	COG3121	Chaperone
Asalp_24090	COG5433	transposase activity
Asalp_24100	COG2197	response regulator
Asalp_24190	COG4681	YaeQ
Asalp_24230	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Asalp_24280	COG3134	Outer membrane lipoprotein
Asalp_24310	COG1288	antiporter activity
Asalp_24320	COG0318	PFAM AMP-dependent synthetase and ligase
Asalp_24330	COG2378	regulation of single-species biofilm formation
Asalp_24350	COG0140	phosphoribosyl-ATP diphosphatase activity
Asalp_24350	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Asalp_24360	COG0107	imidazoleglycerol-phosphate synthase activity
Asalp_24370	COG0784	Response regulator, receiver
Asalp_24370	COG2198	Histidine kinase
Asalp_24370	COG2205	protein histidine kinase activity
Asalp_24390	COG3437	response regulator, receiver
Asalp_24400	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Asalp_24410	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Asalp_24420	COG0131	Imidazoleglycerol-phosphate dehydratase
Asalp_24420	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
Asalp_24430	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Asalp_24440	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Asalp_24450	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Asalp_24470	COG1199	ATP-dependent helicase activity
Asalp_24480	COG1214	PFAM Peptidase M22, glycoprotease
Asalp_24500	COG0596	Alpha beta hydrolase
Asalp_24510	COG0318	PFAM AMP-dependent synthetase and ligase
Asalp_24550	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Asalp_24560	COG2832	Protein of unknown function (DUF454)
Asalp_24570	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Asalp_24580	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Asalp_24590	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Asalp_24640	COG5433	transposase activity
Asalp_24660	COG2197	response regulator
Asalp_24680	COG1643	Atp-dependent helicase
Asalp_24700	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
Asalp_24710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Asalp_24720	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
Asalp_24730	COG0709	Synthesizes selenophosphate from selenide and ATP
Asalp_24760	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
Asalp_24770	COG0840	transmembrane signaling receptor activity
Asalp_24780	COG1254	Belongs to the acylphosphatase family
Asalp_24790	COG0625	glutathione transferase activity
Asalp_24800	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Asalp_24800	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Asalp_24810	COG0489	protein tyrosine kinase activity
Asalp_24820	COG0572	uridine kinase
Asalp_24830	COG0717	Belongs to the dCTP deaminase family
Asalp_24840	COG0306	phosphate transporter
Asalp_24850	COG1530	ribonuclease E activity
Asalp_24890	COG0424	maF-like protein
Asalp_24900	COG1399	metal-binding, possibly nucleic acid-binding protein
Asalp_24910	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Asalp_24920	COG0416	fatty acid biosynthetic process
Asalp_24930	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Asalp_24950	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_24960	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Asalp_24970	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Asalp_24980	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Asalp_24990	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Asalp_25000	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Asalp_25010	COG0470	DNA polymerase III
Asalp_25020	COG0084	hydrolase, TatD family'
Asalp_25050	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
Asalp_25050	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Asalp_25060	COG3008	intermembrane lipid transfer
Asalp_25070	COG2995	paraquat-inducible protein a
Asalp_25090	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
Asalp_25100	COG0372	Belongs to the citrate synthase family
Asalp_25190	COG4221	oxidoreductase activity
Asalp_25210	COG3141	response to X-ray
Asalp_25340	COG0789	Transcriptional regulator
Asalp_25390	COG0789	Transcriptional regulator
Asalp_25410	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Asalp_25440	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
Asalp_25500	COG5499	transcription regulator containing HTH domain
Asalp_25510	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Asalp_25540	COG1067	ATP-dependent peptidase activity
Asalp_25550	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Asalp_25600	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
Asalp_25600	COG0116	Belongs to the methyltransferase superfamily
Asalp_25620	COG0167	dihydroorotate dehydrogenase activity
Asalp_25630	COG2902	Dehydrogenase
Asalp_25650	COG0308	aminopeptidase N
Asalp_25670	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
Asalp_25680	COG1956	GAF domain-containing protein
Asalp_25700	COG3278	Belongs to the heme-copper respiratory oxidase family
Asalp_25730	COG2010	Cytochrome c
Asalp_25750	COG2217	Heavy metal translocating P-type atpase
Asalp_25780	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Asalp_25790	COG0589	response to stress
Asalp_25800	COG0037	tRNA processing
Asalp_25830	COG0625	glutathione transferase activity
Asalp_25840	COG1869	D-ribose catabolic process
Asalp_25850	COG1129	ABC transporter
Asalp_25860	COG1172	Belongs to the binding-protein-dependent transport system permease family
Asalp_25870	COG1879	ABC-type sugar transport system periplasmic component
Asalp_25880	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Asalp_25890	COG1609	Transcriptional regulator
Asalp_25900	COG2199	diguanylate cyclase activity
Asalp_25920	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Asalp_25950	COG0784	Response regulator, receiver
Asalp_25950	COG2205	protein histidine kinase activity
Asalp_25960	COG0776	regulation of translation
Asalp_25970	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Asalp_25970	COG0072	phenylalanine-tRNA ligase activity
Asalp_25980	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Asalp_25990	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Asalp_26000	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Asalp_26010	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Asalp_26020	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Asalp_26070	COG3385	transposase activity
Asalp_26090	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Asalp_26120	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Asalp_26130	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Asalp_26140	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Asalp_26150	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
Asalp_26160	COG3313	Fe-S protein
Asalp_26170	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Asalp_26170	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
Asalp_26170	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Asalp_26180	COG1105	Belongs to the carbohydrate kinase PfkB family
Asalp_26190	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
Asalp_26190	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Asalp_26210	COG1609	Transcriptional regulator
Asalp_26220	COG0814	amino acid
Asalp_26240	COG5654	RES domain protein
Asalp_26250	COG0513	Belongs to the DEAD box helicase family
Asalp_26280	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Asalp_26290	COG2890	protein-(glutamine-N5) methyltransferase activity
Asalp_26300	COG2840	Smr protein MutS2
Asalp_26340	COG4584	PFAM Integrase catalytic
Asalp_26350	COG1484	DNA-dependent DNA replication
Asalp_26360	COG5433	transposase activity
Asalp_26400	COG2824	Alkylphosphonate utilization operon protein PhnA
Asalp_26410	COG1024	Enoyl-CoA hydratase
Asalp_26410	COG1250	3-hydroxyacyl-CoA dehydrogenase
Asalp_26420	COG0183	Belongs to the thiolase family
Asalp_26430	COG0714	Associated with various cellular activities
Asalp_26510	COG2067	long-chain fatty acid transport protein
Asalp_26520	COG2067	long-chain fatty acid transport protein
Asalp_26530	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
Asalp_26750	COG3039	Transposase
Asalp_26830	COG3123	guanosine phosphorylase activity
Asalp_26840	COG1760	l-serine dehydratase
Asalp_26850	COG1760	l-serine dehydratase
Asalp_26860	COG2951	lytic endotransglycosylase activity
Asalp_26870	COG3100	YcgL domain-containing protein
Asalp_26880	COG0850	regulation of cytokinetic process
Asalp_26890	COG2894	cell division
Asalp_26900	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Asalp_26920	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Asalp_27010	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Asalp_27020	COG0697	spore germination
Asalp_27030	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
Asalp_27040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Asalp_27060	COG0307	riboflavin synthase, alpha
Asalp_27100	COG0417	DNA replication proofreading
Asalp_27120	COG2203	Gaf domain
Asalp_27120	COG2199	diguanylate cyclase activity
Asalp_27150	COG1560	Kdo2-lipid A biosynthetic process
Asalp_27160	COG1560	Kdo2-lipid A biosynthetic process
Asalp_27180	COG0583	DNA-binding transcription factor activity
Asalp_27190	COG0673	inositol 2-dehydrogenase activity
Asalp_27200	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
Asalp_27210	COG0583	DNA-binding transcription factor activity
Asalp_27230	COG2723	6-phospho-beta-galactosidase activity
Asalp_27240	COG0583	DNA-binding transcription factor activity
Asalp_27250	COG1879	ABC-type sugar transport system periplasmic component
Asalp_27260	COG1129	ABC transporter
Asalp_27270	COG1172	Belongs to the binding-protein-dependent transport system permease family
Asalp_27280	COG1172	Belongs to the binding-protein-dependent transport system permease family
Asalp_27290	COG5001	Diguanylate cyclase
Asalp_27290	COG4251	negative regulation of phosphorylation
Asalp_27290	COG3706	GGDEF domain
Asalp_27290	COG2203	Gaf domain
Asalp_27310	COG2823	Periplasmic or secreted lipoprotein
Asalp_27510	COG4584	PFAM Integrase catalytic
Asalp_27520	COG1484	DNA-dependent DNA replication
Asalp_27550	COG0730	response to heat
Asalp_27570	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_27590	COG1024	Enoyl-CoA hydratase
Asalp_27600	COG1024	Enoyl-CoA hydratase
Asalp_27610	COG1960	acyl-CoA dehydrogenase activity
Asalp_27630	COG1960	acyl-CoA dehydrogenase activity
Asalp_27640	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Asalp_27650	COG1024	Enoyl-CoA hydratase
Asalp_27720	COG1584	GPR1 FUN34 yaaH family protein
Asalp_27750	COG1115	amino acid carrier protein
Asalp_27760	COG1024	Enoyl-CoA hydratase
Asalp_27760	COG1250	3-hydroxyacyl-CoA dehydrogenase
Asalp_27780	COG0517	IMP dehydrogenase activity
Asalp_27790	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Asalp_27840	COG3039	Transposase
Asalp_27860	COG3039	Transposase
Asalp_27910	COG0488	(ABC) transporter
Asalp_27930	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Asalp_27940	COG0776	regulation of translation
Asalp_27950	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Asalp_27960	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Asalp_27970	COG0740	serine-type endopeptidase activity
Asalp_27980	COG0544	peptidyl-prolyl cis-trans isomerase activity
Asalp_28010	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
Asalp_28020	COG4591	ABC-type transport system involved in lipoprotein release permease component
Asalp_28030	COG1136	(ABC) transporter
Asalp_28040	COG4591	ABC-type transport system involved in lipoprotein release permease component
Asalp_28070	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Asalp_28080	COG4166	transmembrane transport
Asalp_28090	COG0697	spore germination
Asalp_28110	COG2062	phosphohistidine phosphatase, SixA
Asalp_28120	COG1025	Belongs to the peptidase M16 family
Asalp_28220	COG0519	Catalyzes the synthesis of GMP from XMP
Asalp_28220	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Asalp_28230	COG0517	IMP dehydrogenase activity
Asalp_28230	COG0516	GMP reductase activity
Asalp_28280	COG5433	transposase activity
Asalp_28300	COG1570	exodeoxyribonuclease VII activity
Asalp_28310	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Asalp_28330	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Asalp_28340	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Asalp_28350	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
Asalp_28400	COG0598	Magnesium transport protein CorA
Asalp_28440	COG4771	TonB-dependent receptor
Asalp_28450	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Asalp_28460	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Asalp_28470	COG1120	ATPase activity
Asalp_28480	COG2977	Belongs to the P-Pant transferase superfamily
Asalp_28490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Asalp_28500	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Asalp_28500	COG0300	oxidoreductase activity
Asalp_28500	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_28500	COG3321	synthase
Asalp_28500	COG0318	PFAM AMP-dependent synthetase and ligase
Asalp_28520	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_28530	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Asalp_28540	COG1535	isochorismatase
Asalp_28540	COG3433	isochorismatase activity
Asalp_28550	COG1021	2,3-dihydroxybenzoate-AMP ligase
Asalp_28590	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Asalp_28600	COG3300	MHYT domain
Asalp_28600	COG5001	Diguanylate cyclase
Asalp_28630	COG0840	transmembrane signaling receptor activity
Asalp_28640	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Asalp_28650	COG3788	relative of glutathione S-transferase, MAPEG superfamily
Asalp_28660	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Asalp_28670	COG0563	adenylate kinase activity
Asalp_28680	COG0326	Molecular chaperone. Has ATPase activity
Asalp_28690	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Asalp_28750	COG3383	formate dehydrogenase (NAD+) activity
Asalp_28760	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
Asalp_28790	COG5433	transposase activity
Asalp_28820	COG3158	transport of potassium into the cell
Asalp_28830	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
Asalp_28840	COG0651	ATP synthesis coupled electron transport
Asalp_28850	COG0650	Formate hydrogenlyase subunit 4
Asalp_28860	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
Asalp_28860	COG3261	NADH dehydrogenase
Asalp_28870	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Asalp_28880	COG3260	NADH ubiquinone oxidoreductase 20
Asalp_28900	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
Asalp_28910	COG1921	L-seryl-tRNASec selenium transferase activity
Asalp_28930	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
Asalp_28940	COG0298	carbon dioxide binding
Asalp_28960	COG0309	Hydrogenase expression formation protein (HypE)
Asalp_28970	COG0375	protein maturation
Asalp_28980	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
Asalp_28990	COG3842	ATPase activity
Asalp_29010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Asalp_29020	COG0601	transmembrane transport
Asalp_29040	COG1773	rubredoxin
Asalp_29050	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
Asalp_29070	COG5557	Pfam Polysulphide reductase, NrfD
Asalp_29080	COG0437	4 iron, 4 sulfur cluster binding
Asalp_29100	COG5433	transposase activity
Asalp_29130	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Asalp_29160	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
Asalp_29170	COG1917	Cupin 2, conserved barrel domain protein
Asalp_29180	COG0800	Aldolase
Asalp_29190	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Asalp_29230	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_29250	COG1414	Transcriptional regulator
Asalp_29260	COG0823	Involved in the tonB-independent uptake of proteins
Asalp_29270	COG0517	IMP dehydrogenase activity
Asalp_29280	COG2176	DNA-directed DNA polymerase activity
Asalp_29310	COG1435	thymidine kinase activity
Asalp_29320	COG1757	Na H antiporter
Asalp_29330	COG2916	Histone family protein nucleoid-structuring protein H-NS
Asalp_29340	COG2096	Adenosyltransferase
Asalp_29350	COG3530	Putative quorum-sensing-regulated virulence factor
Asalp_29360	COG0602	queuosine metabolic process
Asalp_29370	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Asalp_29400	COG0284	orotidine-5'-phosphate decarboxylase activity
Asalp_29410	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
Asalp_29430	COG0776	regulation of translation
Asalp_29440	COG3385	transposase activity
Asalp_29450	COG0539	negative regulation of cytoplasmic translation
Asalp_29460	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Asalp_29470	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Asalp_29490	COG0583	DNA-binding transcription factor activity
Asalp_29500	COG2814	Major facilitator Superfamily
Asalp_29540	COG5001	Diguanylate cyclase
Asalp_29540	COG3300	MHYT domain
Asalp_29560	COG0583	DNA-binding transcription factor activity
Asalp_29570	COG3437	response regulator, receiver
Asalp_29600	COG0589	response to stress
Asalp_29650	COG4989	oxidoreductase activity
Asalp_29660	COG0724	RNA recognition motif
Asalp_29690	COG1126	abc transporter atp-binding protein
Asalp_29700	COG0765	amino acid transport
Asalp_29710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Asalp_29750	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Asalp_29870	COG4584	PFAM Integrase catalytic
Asalp_29880	COG1484	DNA-dependent DNA replication
Asalp_29940	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Asalp_29950	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Asalp_29960	COG0649	NAD binding
Asalp_29960	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Asalp_29990	COG1034	ATP synthesis coupled electron transport
Asalp_30000	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Asalp_30010	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Asalp_30020	COG0839	Belongs to the complex I subunit 6 family
Asalp_30030	COG0713	ATP synthesis coupled electron transport
Asalp_30050	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Asalp_30060	COG1007	ATP synthesis coupled electron transport
Asalp_30070	COG2801	Transposase and inactivated derivatives
Asalp_30110	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Asalp_30120	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Asalp_30190	COG0537	adenosine 5'-monophosphoramidase activity
Asalp_30220	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Asalp_30240	COG1301	dicarboxylic acid transport
Asalp_30260	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Asalp_30270	COG0861	Integral membrane protein TerC family
Asalp_30290	COG0444	Belongs to the ABC transporter superfamily
Asalp_30300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Asalp_30310	COG0601	transmembrane transport
Asalp_30330	COG2095	MarC family integral membrane protein
Asalp_30350	COG1012	belongs to the aldehyde dehydrogenase family
Asalp_30350	COG1454	alcohol dehydrogenase
Asalp_30360	COG3437	response regulator, receiver
Asalp_30370	COG3275	phosphorelay sensor kinase activity
Asalp_30380	COG3279	Response regulator of the LytR AlgR family
Asalp_30390	COG1966	Carbon starvation protein
Asalp_30420	COG1566	PFAM secretion protein HlyD family protein
Asalp_30430	COG1061	Type III restriction enzyme res subunit
Asalp_30440	COG2027	D-alanyl-D-alanine carboxypeptidase
Asalp_30450	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Asalp_30480	COG0436	Aminotransferase
Asalp_30490	COG1288	antiporter activity
Asalp_30500	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Asalp_30530	COG0697	spore germination
Asalp_30540	COG4657	Part of a membrane complex involved in electron transport
Asalp_30550	COG2878	Part of a membrane complex involved in electron transport
Asalp_30570	COG4658	electron transport chain
Asalp_30580	COG4659	FMN binding
Asalp_30600	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Asalp_30610	COG0346	lactoylglutathione lyase activity
Asalp_30650	COG2056	Na+-H+ antiporter family
Asalp_30660	COG5001	Diguanylate cyclase
Asalp_30660	COG3300	MHYT domain
Asalp_30680	COG0513	Belongs to the DEAD box helicase family
Asalp_30690	COG2050	protein possibly involved in aromatic compounds catabolism
Asalp_30710	COG0247	lactate metabolic process
Asalp_30710	COG0277	FAD linked oxidase domain protein
Asalp_30730	COG1253	flavin adenine dinucleotide binding
Asalp_30740	COG1902	pentaerythritol trinitrate reductase activity
Asalp_30750	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Asalp_30760	COG0647	UMP catabolic process
Asalp_30790	COG0367	asparagine synthase
Asalp_30810	COG2801	Transposase and inactivated derivatives
Asalp_30830	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Asalp_30840	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Asalp_30850	COG0505	Belongs to the CarA family
Asalp_30870	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Asalp_30900	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Asalp_30910	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Asalp_30920	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Asalp_30930	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
Asalp_30940	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Asalp_30950	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
Asalp_30970	COG2205	protein histidine kinase activity
Asalp_30970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Asalp_31050	COG0023	Translation Initiation Factor
Asalp_31060	COG2119	membrane
Asalp_31120	COG2199	diguanylate cyclase activity
Asalp_31120	COG2203	Gaf domain
Asalp_31160	COG3039	Transposase
Asalp_31170	COG2801	Transposase and inactivated derivatives
Asalp_31190	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Asalp_31210	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Asalp_31220	COG2261	transglycosylase associated protein
Asalp_31310	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
Asalp_31350	COG4584	PFAM Integrase catalytic
Asalp_31360	COG1484	DNA-dependent DNA replication
Asalp_31490	COG0322	excinuclease ABC activity
Asalp_31500	COG2197	response regulator
Asalp_31510	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
Asalp_31520	COG2835	tetraacyldisaccharide 4'-kinase activity
Asalp_31530	COG1663	tetraacyldisaccharide 4'-kinase activity
Asalp_31540	COG1132	(ABC) transporter
Asalp_31550	COG2333	competence protein COMEC
Asalp_31550	COG0658	competence protein
Asalp_31580	COG0433	COG0433 Predicted ATPase
Asalp_31590	COG1448	Aminotransferase
Asalp_31610	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
Asalp_31620	COG1199	ATP-dependent helicase activity
Asalp_31640	COG0123	including yeast histone deacetylase and acetoin utilization protein
Asalp_31650	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
Asalp_31660	COG1785	Belongs to the alkaline phosphatase family
Asalp_31700	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Asalp_31730	COG2271	Major facilitator Superfamily
Asalp_31740	COG3706	GGDEF domain
Asalp_31750	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Asalp_31760	COG0765	amino acid transport
Asalp_31770	COG1126	abc transporter atp-binding protein
Asalp_31790	COG0531	amino acid
Asalp_31800	COG1484	DNA-dependent DNA replication
Asalp_31810	COG4584	PFAM Integrase catalytic
Asalp_31840	COG1253	flavin adenine dinucleotide binding
Asalp_31850	COG0704	Plays a role in the regulation of phosphate uptake
Asalp_31870	COG0581	inorganic phosphate transmembrane transporter activity
Asalp_31880	COG0573	inorganic phosphate transmembrane transporter activity
Asalp_31890	COG0590	tRNA wobble adenosine to inosine editing
Asalp_31920	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Asalp_31960	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Asalp_31970	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
Asalp_31980	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Asalp_31990	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Asalp_32000	COG2204	response regulator
Asalp_32010	COG3852	Histidine kinase
Asalp_32020	COG2204	response regulator
Asalp_32050	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
Asalp_32060	COG0248	Ppx GppA phosphatase
Asalp_32070	COG2239	Acts as a magnesium transporter
Asalp_32100	COG3951	Flagellar rod assembly protein muramidase FlgJ
Asalp_32100	COG1705	Flagellar rod assembly protein muramidase FlgJ
Asalp_32110	COG1706	bacterial-type flagellum-dependent cell motility
Asalp_32120	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
Asalp_32130	COG4786	Flagellar basal body rod
Asalp_32140	COG4787	bacterial-type flagellum-dependent cell motility
Asalp_32170	COG1558	bacterial-type flagellum-dependent cell motility
Asalp_32180	COG1815	bacterial-type flagellum-dependent cell motility
Asalp_32190	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
Asalp_32200	COG0784	Response regulator, receiver
Asalp_32200	COG0835	chemotaxis
Asalp_32240	COG0622	Phosphoesterase
Asalp_32250	COG4166	transmembrane transport
Asalp_32270	COG1187	pseudouridine synthase activity
Asalp_32300	COG0697	spore germination
Asalp_32310	COG4166	transmembrane transport
Asalp_32350	COG3385	transposase activity
Asalp_32370	COG1278	Cold shock
Asalp_32450	COG3132	Protein of unknown function, DUF480
Asalp_32480	COG5433	transposase activity
Asalp_32520	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Asalp_32640	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
Asalp_32670	COG1538	Outer membrane efflux protein
Asalp_32680	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Asalp_32690	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Asalp_32700	COG1309	transcriptional regulator
Asalp_32730	COG1946	Acyl-CoA thioesterase
Asalp_32760	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Asalp_32780	COG0009	L-threonylcarbamoyladenylate synthase
Asalp_32790	COG0613	PHP domain protein
Asalp_32810	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Asalp_32820	COG0512	Glutamine amidotransferase of anthranilate synthase
Asalp_32820	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Asalp_32830	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Asalp_32840	COG0135	phosphoribosylanthranilate isomerase activity
Asalp_32840	COG0134	indole-3-glycerol-phosphate synthase activity
Asalp_32850	COG0133	tryptophan synthase activity
Asalp_32860	COG0159	tryptophan synthase activity
Asalp_32920	COG0783	Belongs to the Dps family
Asalp_32950	COG5433	transposase activity
Asalp_32990	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
Asalp_32990	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Asalp_32990	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Asalp_33020	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Asalp_33060	COG0482	sulfurtransferase activity
Asalp_33070	COG2915	High frequency lysogenization protein hflD homolog
Asalp_33080	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Asalp_33090	COG2850	peptidyl-arginine hydroxylation
Asalp_33100	COG3153	acetyltransferase
Asalp_33130	COG0259	pyridoxamine-phosphate oxidase activity
Asalp_33160	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Asalp_33160	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Asalp_33170	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Asalp_33200	COG1484	DNA-dependent DNA replication
Asalp_33210	COG4584	PFAM Integrase catalytic
Asalp_33230	COG4235	cytochrome complex assembly
Asalp_33230	COG3088	subunit of a heme lyase
Asalp_33250	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Asalp_33260	COG1138	Cytochrome C-type biogenesis protein
Asalp_33270	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
Asalp_33280	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Asalp_33290	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Asalp_33300	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Asalp_33330	COG0835	chemotaxis
Asalp_33350	COG1192	Involved in chromosome partitioning
Asalp_33360	COG1360	Flagellar Motor Protein
Asalp_33370	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Asalp_33380	COG2201	protein-glutamate methylesterase activity
Asalp_33390	COG0643	Histidine kinase
Asalp_33390	COG2198	Histidine kinase
Asalp_33400	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
Asalp_33420	COG3039	Transposase
Asalp_33440	COG0455	bacterial-type flagellum organization
Asalp_33460	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Asalp_33480	COG1684	flagellar biosynthetic protein fliR
Asalp_33490	COG1987	bacterial-type flagellum assembly
Asalp_33590	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Asalp_33610	COG1677	Flagellar hook-basal body complex protein FliE
Asalp_33640	COG1342	Belongs to the UPF0251 family
Asalp_33680	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Asalp_33690	COG2862	Uncharacterized protein family, UPF0114
Asalp_33700	COG1253	flavin adenine dinucleotide binding
Asalp_33710	COG1968	undecaprenyl-diphosphatase activity
Asalp_33730	COG3064	Membrane
Asalp_33730	COG1073	alpha beta
Asalp_33730	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
Asalp_33740	COG2994	toxin metabolic process
Asalp_33760	COG2274	protein secretion by the type I secretion system
Asalp_33780	COG2274	protein secretion by the type I secretion system
Asalp_33790	COG0745	RESPONSE REGULATOR receiver
Asalp_33800	COG3290	protein histidine kinase activity
Asalp_33820	COG1737	Transcriptional regulator
Asalp_33830	COG0469	pyruvate kinase activity
Asalp_33850	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Asalp_33860	COG1960	acyl-CoA dehydrogenase activity
Asalp_33880	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
Asalp_33890	COG1388	LysM domain
Asalp_33890	COG1376	ErfK ybiS ycfS ynhG family protein
Asalp_33920	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
Asalp_33930	COG0791	NLP P60 protein
Asalp_33950	COG3118	belongs to the thioredoxin family
Asalp_33970	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Asalp_33990	COG0788	formyltetrahydrofolate deformylase activity
Asalp_34010	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Asalp_34050	COG0366	Alpha amylase catalytic
Asalp_34060	COG0741	lytic transglycosylase activity
Asalp_34060	COG1196	nuclear chromosome segregation
Asalp_34060	COG0739	heme binding
Asalp_34070	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Asalp_34080	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Asalp_34150	COG1032	radical SAM domain protein
Asalp_34170	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Asalp_34180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Asalp_34190	COG3706	GGDEF domain
Asalp_34200	COG1752	Esterase of the alpha-beta hydrolase superfamily
Asalp_34210	COG0733	neurotransmitter:sodium symporter activity
Asalp_34290	COG2885	chlorophyll binding
Asalp_34290	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Asalp_34300	COG0281	malic enzyme
Asalp_34310	COG2207	Transcriptional regulator
Asalp_34320	COG0534	Mate efflux family protein
Asalp_34340	COG0745	RESPONSE REGULATOR receiver
Asalp_34340	COG3706	GGDEF domain
Asalp_34350	COG2233	PERMEase
Asalp_34360	COG0095	Lipoate-protein ligase
Asalp_34370	COG1115	amino acid carrier protein
Asalp_34380	COG0019	diaminopimelate decarboxylase activity
Asalp_34420	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
Asalp_34460	COG1131	(ABC) transporter
Asalp_34470	COG0545	Peptidyl-prolyl cis-trans isomerase
Asalp_34480	COG3142	Participates in the control of copper homeostasis
Asalp_34490	COG1940	carbohydrate kinase activity
Asalp_34510	COG4783	chaperone-mediated protein folding
Asalp_34530	COG5002	protein histidine kinase activity
Asalp_34540	COG0745	RESPONSE REGULATOR receiver
Asalp_34550	COG0346	lactoylglutathione lyase activity
Asalp_34580	COG3284	Transcriptional regulator
Asalp_34590	COG1012	belongs to the aldehyde dehydrogenase family
Asalp_34610	COG0697	spore germination
Asalp_34630	COG0667	Aldo Keto reductase
Asalp_34660	COG3290	protein histidine kinase activity
Asalp_34670	COG0281	malic enzyme
Asalp_34710	COG1846	Transcriptional regulator
Asalp_34720	COG1566	PFAM secretion protein HlyD family protein
Asalp_34770	COG0602	queuosine metabolic process
Asalp_34780	COG1328	CTP reductase activity
Asalp_34810	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Asalp_34820	COG3115	cell septum assembly
Asalp_34830	COG1196	nuclear chromosome segregation
Asalp_34850	COG2860	membrane
Asalp_34870	COG3108	Peptidase M15
Asalp_34880	COG2989	Protein conserved in bacteria
Asalp_34910	COG0463	Glycosyl transferase, family 2
Asalp_34940	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Asalp_34950	COG0739	heme binding
Asalp_34960	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Asalp_34980	COG5433	transposase activity
Asalp_35010	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Asalp_35030	COG3091	SprT-like family
Asalp_35050	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Asalp_35060	COG0189	ligase activity
Asalp_35080	COG1678	Uncharacterized ACR, COG1678
Asalp_35090	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Asalp_35110	COG0714	Associated with various cellular activities
Asalp_35140	COG1115	amino acid carrier protein
Asalp_35150	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Asalp_35180	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
Asalp_35220	COG2912	Transglutaminase-like superfamily
Asalp_35240	COG2890	protein-(glutamine-N5) methyltransferase activity
Asalp_35250	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Asalp_35260	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Asalp_35270	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
Asalp_35280	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
Asalp_35290	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Asalp_35300	COG0737	Belongs to the 5'-nucleotidase family
Asalp_35310	COG0193	aminoacyl-tRNA hydrolase activity
Asalp_35320	COG0012	GTP binding
Asalp_35330	COG0471	metal ion transport
Asalp_35330	COG0490	domain, Protein
Asalp_35350	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
Asalp_35390	COG0366	Alpha amylase catalytic
Asalp_35420	COG0488	(ABC) transporter
Asalp_35440	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Asalp_35440	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Asalp_35440	COG0674	pyruvate-flavodoxin oxidoreductase activity
Asalp_35440	COG1013	pyruvate-flavodoxin oxidoreductase activity
Asalp_35460	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Asalp_35480	COG1012	belongs to the aldehyde dehydrogenase family
Asalp_35500	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Asalp_35530	COG0180	Tryptophanyl-tRNA synthetase
Asalp_35540	COG0546	phosphoglycolate phosphatase activity
Asalp_35550	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Asalp_35560	COG0338	D12 class N6 adenine-specific DNA methyltransferase
Asalp_35580	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Asalp_35590	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Asalp_35670	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
Asalp_35680	COG0583	DNA-binding transcription factor activity
Asalp_35690	COG0840	transmembrane signaling receptor activity
Asalp_35720	COG0583	DNA-binding transcription factor activity
Asalp_35750	COG0739	heme binding
Asalp_35770	COG1511	domain protein
Asalp_35770	COG3264	Mechanosensitive ion channel
Asalp_35780	COG0584	glycerophosphoryl diester phosphodiesterase
Asalp_35800	COG1053	succinate dehydrogenase
Asalp_35810	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Asalp_35820	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
Asalp_35830	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
Asalp_35850	COG3214	Protein conserved in bacteria
Asalp_35880	COG1022	Amp-dependent synthetase and ligase
Asalp_35920	COG0745	RESPONSE REGULATOR receiver
Asalp_35930	COG0642	Histidine kinase
Asalp_35950	COG0516	GMP reductase activity
Asalp_35970	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Asalp_35990	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Asalp_36010	COG3706	GGDEF domain
Asalp_36030	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Asalp_36060	COG3706	GGDEF domain
Asalp_36080	COG1335	isochorismatase
Asalp_36090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Asalp_36100	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Asalp_36110	COG1702	phosphate starvation-inducible protein PhoH
Asalp_36120	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Asalp_36130	COG4535	Mg2 and Co2 transporter CorC
Asalp_36140	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Asalp_36150	COG2888	peptidyl-tyrosine sulfation
Asalp_36160	COG0495	leucyl-tRNA aminoacylation
Asalp_36200	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Asalp_36210	COG0799	negative regulation of ribosome biogenesis
Asalp_36220	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Asalp_36230	COG0768	penicillin binding
Asalp_36240	COG0772	Belongs to the SEDS family
Asalp_36250	COG2951	lytic endotransglycosylase activity
Asalp_36260	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Asalp_36270	COG1686	Belongs to the peptidase S11 family
Asalp_36280	COG2921	Belongs to the UPF0250 family
Asalp_36290	COG0321	lipoyl(octanoyl) transferase activity
Asalp_36300	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Asalp_36310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Asalp_36320	COG3545	Serine hydrolase
Asalp_36350	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Asalp_36370	COG1970	mechanosensitive ion channel activity
Asalp_36380	COG3706	GGDEF domain
Asalp_36390	COG4974	Belongs to the 'phage' integrase family
Asalp_36400	COG0716	FMN binding
Asalp_36420	COG0312	modulator of DNA gyrase
Asalp_36510	COG0114	fumarate hydratase activity
Asalp_36520	COG1422	Protein of unknown function (DUF1090)
Asalp_36530	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Asalp_36540	COG3706	GGDEF domain
Asalp_36550	COG2211	Major facilitator Superfamily
Asalp_36560	COG1185	polyribonucleotide nucleotidyltransferase activity
Asalp_36570	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Asalp_36580	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Asalp_36590	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Asalp_36600	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Asalp_36610	COG0195	Participates in both transcription termination and antitermination
Asalp_36620	COG0779	Required for maturation of 30S ribosomal subunits
Asalp_36630	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Asalp_36640	COG0149	triose-phosphate isomerase activity
Asalp_36660	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Asalp_36670	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Asalp_36680	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Asalp_36690	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
Asalp_36700	COG1534	Rna-binding protein
Asalp_36720	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Asalp_36740	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Asalp_36760	COG1360	Flagellar Motor Protein
Asalp_36770	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Asalp_36780	COG1722	exodeoxyribonuclease VII activity
Asalp_36790	COG0142	geranyltranstransferase activity
Asalp_36800	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Asalp_36830	COG0747	negative chemotaxis
Asalp_36850	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Asalp_36860	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Asalp_36870	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Asalp_36880	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Asalp_36910	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Asalp_36910	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Asalp_36920	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Asalp_36950	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Asalp_37000	COG3381	protein complex oligomerization
Asalp_37060	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Asalp_37070	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Asalp_37080	COG0511	ligase activity, forming carbon-carbon bonds
Asalp_37090	COG0439	Biotin carboxylase
Asalp_37100	COG3924	membrane
Asalp_37110	COG4145	pantothenate transmembrane transporter activity
Asalp_37120	COG1263	PTS System
Asalp_37120	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
Asalp_37120	COG2190	(PTS) system
Asalp_37130	COG0583	DNA-binding transcription factor activity
Asalp_37140	COG0604	alcohol dehydrogenase
Asalp_37160	COG2264	protein methyltransferase activity
Asalp_37170	COG0531	amino acid
Asalp_37180	COG4303	Ethanolamine ammonia lyase large subunit
Asalp_37190	COG4302	ethanolamine ammonia-lyase activity
Asalp_37240	COG0778	Nitroreductase
Asalp_37250	COG1902	pentaerythritol trinitrate reductase activity
Asalp_37250	COG0446	pyridine nucleotide-disulphide oxidoreductase
Asalp_37260	COG0616	signal peptide processing
Asalp_37300	COG3139	Protein of unknown function (DUF1315)
Asalp_37310	COG0252	asparaginase activity
Asalp_37320	COG0786	glutamate:sodium symporter activity
Asalp_37350	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Asalp_37360	COG0384	phenazine biosynthesis protein PhzF
Asalp_37370	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Asalp_37380	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Asalp_37390	COG0175	sulfate reduction
Asalp_37400	COG2113	Glycine betaine
Asalp_37410	COG4176	ABC-type proline glycine betaine transport system permease component
Asalp_37420	COG4175	Glycine betaine
Asalp_37440	COG3610	response to peptide
Asalp_37470	COG2966	Psort location CytoplasmicMembrane, score
Asalp_37490	COG0521	Mo-molybdopterin cofactor biosynthetic process
Asalp_37510	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Asalp_37520	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_37540	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Asalp_37590	COG2986	histidine ammonia-lyase
Asalp_37620	COG0318	PFAM AMP-dependent synthetase and ligase
Asalp_37640	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Asalp_37650	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Asalp_37680	COG3039	Transposase
Asalp_37690	COG4584	PFAM Integrase catalytic
Asalp_37700	COG1484	DNA-dependent DNA replication
Asalp_37720	COG3385	transposase activity
Asalp_37730	COG2313	pseudouridylate synthase activity
Asalp_37740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Asalp_37750	COG2146	nitrite reductase [NAD(P)H] activity
Asalp_37750	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Asalp_37760	COG2146	nitrite reductase [NAD(P)H] activity
Asalp_37760	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Asalp_37770	COG1116	anion transmembrane transporter activity
Asalp_37780	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Asalp_37790	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Asalp_37790	COG1116	anion transmembrane transporter activity
Asalp_37820	COG0243	molybdopterin cofactor binding
Asalp_37870	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
Asalp_37880	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Asalp_37920	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
Asalp_37950	COG2195	Cleaves the N-terminal amino acid of tripeptides
Asalp_37970	COG4608	Belongs to the ABC transporter superfamily
Asalp_37980	COG0444	Belongs to the ABC transporter superfamily
Asalp_37990	COG0747	negative chemotaxis
Asalp_38000	COG4239	(ABC) transporter, permease
Asalp_38010	COG4174	ABC transporter (Permease)
Asalp_38030	COG4206	TonB-dependent receptor
Asalp_38050	COG0811	peptide transport
Asalp_38060	COG0811	peptide transport
Asalp_38070	COG0848	biopolymer transport protein
Asalp_38130	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Asalp_38140	COG0840	transmembrane signaling receptor activity
Asalp_38160	COG1278	Cold shock
Asalp_38170	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
Asalp_38190	COG0688	phosphatidylethanolamine metabolic process
Asalp_38200	COG4628	conserved protein (DUF2132)
Asalp_38240	COG3300	MHYT domain
Asalp_38240	COG5001	Diguanylate cyclase
Asalp_38250	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
Asalp_38260	COG3291	Pkd domain containing protein
Asalp_38260	COG4412	M6 family metalloprotease domain protein
Asalp_38300	COG3039	Transposase
Asalp_38320	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Asalp_38330	COG0489	protein tyrosine kinase activity
Asalp_38330	COG3206	protein involved in exopolysaccharide biosynthesis
Asalp_38410	COG4974	Belongs to the 'phage' integrase family
Asalp_38450	COG0582	viral genome integration into host DNA
Asalp_38480	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
Asalp_38490	COG1012	belongs to the aldehyde dehydrogenase family
Asalp_38520	COG1132	(ABC) transporter
Asalp_38540	COG2897	thiosulfate sulfurtransferase activity
Asalp_38550	COG2066	Belongs to the glutaminase family
Asalp_38560	COG3171	Protein conserved in bacteria
Asalp_38570	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Asalp_38580	COG4935	Belongs to the peptidase S8 family
Asalp_38580	COG2234	aminopeptidase activity
Asalp_38590	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Asalp_38600	COG2200	EAL domain
Asalp_38610	COG1090	epimerase
Asalp_38620	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
Asalp_38630	COG4181	ATPase activity
Asalp_38640	COG2755	lipolytic protein G-D-S-L family
Asalp_38650	COG0784	Response regulator, receiver
Asalp_38650	COG0835	chemotaxis
Asalp_38670	COG2985	domain, Protein
Asalp_38670	COG0569	domain protein
Asalp_38680	COG1272	protein, Hemolysin III
Asalp_38690	COG0076	glutamate decarboxylase activity
Asalp_38700	COG2917	probably involved in intracellular septation
Asalp_38710	COG2350	Protein conserved in bacteria
Asalp_38730	COG1555	photosystem II stabilization
Asalp_38740	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Asalp_38750	COG3104	oligopeptide transport
Asalp_38760	COG0745	RESPONSE REGULATOR receiver
Asalp_38790	COG0471	metal ion transport
Asalp_38850	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Asalp_38870	COG4584	PFAM Integrase catalytic
Asalp_38880	COG1484	DNA-dependent DNA replication
Asalp_38900	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
Asalp_38910	COG1280	lysine exporter protein (LysE YggA)
Asalp_38920	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Asalp_38930	COG0564	pseudouridine synthase activity
Asalp_38950	COG3300	MHYT domain
Asalp_38950	COG5001	Diguanylate cyclase
Asalp_38970	COG0459	protein refolding
Asalp_38980	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Asalp_39000	COG3030	protein affecting phage T7 exclusion by the F plasmid
Asalp_39010	COG1027	Aspartate ammonia-lyase
Asalp_39020	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
Asalp_39040	COG0477	Major facilitator Superfamily
Asalp_39060	COG3227	Zinc metalloprotease (Elastase)
Asalp_39070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Asalp_39080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Asalp_39100	COG0673	inositol 2-dehydrogenase activity
Asalp_39120	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Asalp_39130	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Asalp_39140	COG3036	rescue of stalled ribosome
Asalp_39150	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
Asalp_39180	COG0138	bifunctional purine biosynthesis protein purh
Asalp_39190	COG0151	Belongs to the GarS family
Asalp_39250	COG1484	DNA-dependent DNA replication
Asalp_39260	COG4584	PFAM Integrase catalytic
Asalp_39290	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Asalp_39310	COG2995	paraquat-inducible protein a
Asalp_39320	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Asalp_39320	COG3008	intermembrane lipid transfer
Asalp_39330	COG3009	Protein conserved in bacteria
Asalp_39360	COG3240	lipase activity
Asalp_39370	COG3111	PFAM Bacterial OB fold (BOF) protein
Asalp_39390	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
Asalp_39400	COG1194	a g-specific adenine glycosylase
Asalp_39420	COG3409	Peptidoglycan-binding domain 1 protein
Asalp_39420	COG3267	Type II secretory pathway component ExeA
Asalp_39430	COG0617	tRNA 3'-terminal CCA addition
Asalp_39440	COG0306	phosphate transporter
Asalp_39450	COG1392	Phosphate transport regulator
Asalp_39480	COG1560	Kdo2-lipid A biosynthetic process
Asalp_39490	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
Asalp_39490	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
Asalp_39510	COG1538	Outer membrane efflux protein
Asalp_39520	COG0494	nUDIX hydrolase
Asalp_39540	COG3151	Protein conserved in bacteria
Asalp_39550	COG3039	Transposase
Asalp_39570	COG3150	esterase
Asalp_39580	COG1051	belongs to the nudix hydrolase family
Asalp_39600	COG0187	DNA topoisomerase II activity
Asalp_39620	COG5433	transposase activity
Asalp_39670	COG4584	PFAM Integrase catalytic
Asalp_39680	COG1484	DNA-dependent DNA replication
Asalp_39700	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Asalp_39710	COG2813	Specifically methylates the guanine in position
Asalp_39720	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Asalp_39730	COG0297	glycogen (starch) synthase activity
Asalp_39760	COG5433	transposase activity
Asalp_39780	COG1757	Na H antiporter
Asalp_39820	COG5006	permease, DMT superfamily
Asalp_39830	COG1522	sequence-specific DNA binding
Asalp_39840	COG0110	maltose O-acetyltransferase activity
Asalp_39850	COG0366	Alpha amylase catalytic
Asalp_39860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
Asalp_39860	COG1263	PTS System
Asalp_39890	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
Asalp_39900	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
Asalp_39910	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
Asalp_39910	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
Asalp_39920	COG2723	6-phospho-beta-galactosidase activity
Asalp_39930	COG1447	Phosphotransferase system cellobiose-specific component IIA
Asalp_39940	COG1940	carbohydrate kinase activity
Asalp_39960	COG1609	Transcriptional regulator
Asalp_39980	COG0252	asparaginase activity
Asalp_40010	COG1803	Methylglyoxal synthase
Asalp_40060	COG1444	tRNA N-acetyltransferase activity
Asalp_40080	COG0784	Response regulator, receiver
Asalp_40080	COG0835	chemotaxis
Asalp_40120	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Asalp_40130	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Asalp_40160	COG0477	Major facilitator Superfamily
Asalp_40170	COG0523	cobalamin synthesis protein
Asalp_40190	COG1280	lysine exporter protein (LysE YggA)
Asalp_40210	COG0583	DNA-binding transcription factor activity
Asalp_40220	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_40230	COG2200	EAL domain
Asalp_40240	COG1049	propionate catabolic process, 2-methylcitrate cycle
Asalp_40260	COG0840	transmembrane signaling receptor activity
Asalp_40270	COG0840	transmembrane signaling receptor activity
Asalp_40290	COG5002	protein histidine kinase activity
Asalp_40290	COG3447	MASE1 domain protein
Asalp_40290	COG5001	Diguanylate cyclase
Asalp_40310	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Asalp_40320	COG0508	dehydrogenase complex catalyzes the overall conversion of
Asalp_40330	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
Asalp_40340	COG2186	Transcriptional regulator
Asalp_40410	COG1459	type II secretion system
Asalp_40420	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
Asalp_40440	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
Asalp_40450	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Asalp_40460	COG0494	nUDIX hydrolase
Asalp_40470	COG0653	protein targeting
Asalp_40490	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Asalp_40500	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Asalp_40510	COG0849	cell division
Asalp_40520	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Asalp_40530	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Asalp_40540	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Asalp_40550	COG0772	Belongs to the SEDS family
Asalp_40560	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Asalp_40570	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Asalp_40580	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Asalp_40600	COG0768	penicillin binding
Asalp_40610	COG3116	cell division
Asalp_40620	COG0275	rRNA processing
Asalp_40630	COG2001	Belongs to the MraZ family
Asalp_40640	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Asalp_40650	COG3107	peptidoglycan biosynthetic process
Asalp_40660	COG0792	nuclease activity
Asalp_40670	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
Asalp_40680	COG2823	Periplasmic or secreted lipoprotein
Asalp_40690	COG2969	positive regulation of protein catabolic process
Asalp_40700	COG0625	glutathione transferase activity
Asalp_40710	COG2857	Cytochrome c1
Asalp_40720	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Asalp_40730	COG0723	plastoquinol--plastocyanin reductase activity
Asalp_40740	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Asalp_40750	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Asalp_40760	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Asalp_40780	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Asalp_40790	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Asalp_40850	COG3964	amidohydrolase
Asalp_40890	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Asalp_40900	COG1660	Displays ATPase and GTPase activities
Asalp_40910	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
Asalp_40930	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
Asalp_40940	COG1137	ATPase activity
Asalp_40950	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
Asalp_40960	COG3117	lipopolysaccharide transmembrane transporter activity
Asalp_40970	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Asalp_40980	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Asalp_40980	COG0517	IMP dehydrogenase activity
Asalp_40990	COG1127	ABC transporter
Asalp_41000	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Asalp_41010	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Asalp_41020	COG2854	intermembrane phospholipid transfer
Asalp_41040	COG5007	Belongs to the BolA IbaG family
Asalp_41050	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Asalp_41060	COG0312	modulator of DNA gyrase
Asalp_41070	COG3028	Belongs to the UPF0307 family
Asalp_41100	COG2926	Belongs to the UPF0265 family
Asalp_41120	COG1396	sequence-specific DNA binding
Asalp_41130	COG3135	benzoate transporter
Asalp_41190	COG3047	cAMP biosynthetic process
Asalp_41210	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Asalp_41220	COG2197	response regulator
Asalp_41260	COG3385	transposase activity
Asalp_41320	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Asalp_41410	COG1278	Cold shock
Asalp_41420	COG4771	TonB-dependent receptor
Asalp_41450	COG2205	protein histidine kinase activity
Asalp_41460	COG0745	RESPONSE REGULATOR receiver
Asalp_41520	COG0840	transmembrane signaling receptor activity
Asalp_41540	COG0745	RESPONSE REGULATOR receiver
Asalp_41540	COG3706	GGDEF domain
Asalp_41550	COG0347	Belongs to the P(II) protein family
Asalp_41560	COG0004	ammonium transporteR
Asalp_41580	COG3039	Transposase
Asalp_41600	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Asalp_41610	COG1074	ATP-dependent DNA helicase activity
Asalp_41620	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Asalp_41630	COG2259	Doxx family
Asalp_41640	COG1741	Belongs to the pirin family
Asalp_41660	COG0583	DNA-binding transcription factor activity
Asalp_41710	COG1176	ABC-type spermidine putrescine transport system, permease component I
Asalp_41730	COG3842	ATPase activity
Asalp_41750	COG2203	Gaf domain
Asalp_41750	COG2199	diguanylate cyclase activity
Asalp_41790	COG1247	-acetyltransferase
Asalp_41800	COG0753	catalase activity
Asalp_41850	COG0671	phosphoesterase, PA-phosphatase related
Asalp_41860	COG0628	permease
Asalp_41890	COG3284	Transcriptional regulator
Asalp_41920	COG1461	Dihydroxyacetone kinase
Asalp_41930	COG2376	Dihydroxyacetone kinase
Asalp_41940	COG2252	PERMEase
Asalp_41960	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
Asalp_41970	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Asalp_41980	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Asalp_41990	COG0049	tRNA binding
Asalp_42000	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Asalp_42010	COG2168	tRNA wobble position uridine thiolation
Asalp_42020	COG2923	Belongs to the DsrF TusC family
Asalp_42050	COG2964	Protein conserved in bacteria
Asalp_42060	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Asalp_42070	COG0085	RNA polymerase activity
Asalp_42080	COG0222	ribosome binding
Asalp_42090	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Asalp_42100	COG0081	regulation of translation
Asalp_42110	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Asalp_42120	COG0250	Participates in transcription elongation, termination and antitermination
Asalp_42130	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Asalp_42140	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Asalp_42180	COG0812	UDP-N-acetylmuramate dehydrogenase activity
Asalp_42200	COG0569	domain protein
Asalp_42210	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Asalp_42230	COG3005	denitrification pathway
Asalp_42240	COG0243	molybdopterin cofactor binding
Asalp_42260	COG2205	protein histidine kinase activity
Asalp_42270	COG0745	RESPONSE REGULATOR receiver
Asalp_42300	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
Asalp_42310	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Asalp_42340	COG2204	response regulator
Asalp_42360	COG2205	protein histidine kinase activity
Asalp_42390	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_42400	COG0516	GMP reductase activity
Asalp_42400	COG0517	IMP dehydrogenase activity
Asalp_42410	COG5413	integral membrane protein
Asalp_42430	COG1522	sequence-specific DNA binding
Asalp_42440	COG2502	aspartate--ammonia ligase
Asalp_42450	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
Asalp_42460	COG0542	response to heat
Asalp_42480	COG0564	pseudouridine synthase activity
Asalp_42490	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Asalp_42500	COG0446	pyridine nucleotide-disulphide oxidoreductase
Asalp_42530	COG2964	Protein conserved in bacteria
Asalp_42550	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Asalp_42560	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Asalp_42570	COG3385	transposase activity
Asalp_42580	COG1979	alcohol dehydrogenase
Asalp_42590	COG2207	Transcriptional regulator
Asalp_42600	COG3040	lipid binding
Asalp_42630	COG0688	phosphatidylethanolamine metabolic process
Asalp_42670	COG0540	Belongs to the ATCase OTCase family
Asalp_42680	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
Asalp_42700	COG1288	antiporter activity
Asalp_42710	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Asalp_42800	COG4211	Belongs to the binding-protein-dependent transport system permease family
Asalp_42830	COG3250	beta-galactosidase activity
Asalp_42840	COG1609	Transcriptional regulator
Asalp_42850	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Asalp_42870	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
Asalp_42880	COG2017	converts alpha-aldose to the beta-anomer
Asalp_42890	COG0667	Aldo Keto reductase
Asalp_42900	COG1968	undecaprenyl-diphosphatase activity
Asalp_42910	COG3385	transposase activity
Asalp_42930	COG1595	DNA-templated transcription, initiation
Asalp_42970	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
Asalp_42980	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
Asalp_43020	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Asalp_43030	COG2146	nitrite reductase [NAD(P)H] activity
Asalp_43040	COG2116	formate transmembrane transporter activity
Asalp_43050	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Asalp_43050	COG1648	precorrin-2 dehydrogenase activity
Asalp_43060	COG2239	Acts as a magnesium transporter
Asalp_43080	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Asalp_43090	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
Asalp_43110	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Asalp_43130	COG0514	ATP-dependent DNA helicase (RecQ)
Asalp_43140	COG2050	protein possibly involved in aromatic compounds catabolism
Asalp_43160	COG2258	MOSC domain
Asalp_43170	COG1177	transmembrane transport
Asalp_43180	COG1176	ABC-type spermidine putrescine transport system, permease component I
Asalp_43190	COG3842	ATPase activity
Asalp_43240	COG0174	glutamine synthetase
Asalp_43250	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Asalp_43270	COG3045	CreA protein
Asalp_43280	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Asalp_43290	COG0443	Heat shock 70 kDa protein
Asalp_43320	COG1639	'signal transduction protein
Asalp_43330	COG0366	Alpha amylase catalytic
Asalp_43360	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Asalp_43370	COG0745	RESPONSE REGULATOR receiver
Asalp_43380	COG2205	protein histidine kinase activity
Asalp_43400	COG0281	malic enzyme
Asalp_43410	COG0702	epimerase
Asalp_43420	COG0254	rRNA binding
Asalp_43430	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Asalp_43450	COG1309	transcriptional regulator
Asalp_43490	COG0129	dihydroxy-acid dehydratase activity
Asalp_43500	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Asalp_43510	COG3978	acetolactate synthase activity
Asalp_43540	COG0606	chelatase, subunit chli
Asalp_43550	COG0204	Acyl-transferase
Asalp_43580	COG1335	isochorismatase
Asalp_43600	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
Asalp_43610	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
Asalp_43620	COG3639	organic phosphonate transmembrane transporter activity
Asalp_43630	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Asalp_43650	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
Asalp_43670	COG3084	Protein conserved in bacteria
Asalp_43680	COG2203	Gaf domain
Asalp_43680	COG5001	Diguanylate cyclase
Asalp_43680	COG4251	negative regulation of phosphorylation
Asalp_43680	COG3706	GGDEF domain
Asalp_43700	COG2217	Heavy metal translocating P-type atpase
Asalp_43710	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Asalp_43730	COG1561	YicC-like family, N-terminal region
Asalp_43760	COG3039	Transposase
Asalp_43840	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Asalp_43920	COG3306	glycosyltransferase involved in LPS biosynthesis
Asalp_43950	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Asalp_43980	COG1063	alcohol dehydrogenase
Asalp_44010	COG0210	DNA helicase
Asalp_44020	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Asalp_44030	COG2166	iron-sulfur cluster assembly
Asalp_44040	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Asalp_44050	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
Asalp_44060	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Asalp_44070	COG1739	Uncharacterized protein family UPF0029
Asalp_44080	COG0006	proline dipeptidase activity
Asalp_44090	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Asalp_44100	COG1250	3-hydroxyacyl-CoA dehydrogenase
Asalp_44100	COG1024	Enoyl-CoA hydratase
Asalp_44110	COG0183	Belongs to the thiolase family
Asalp_44120	COG0745	RESPONSE REGULATOR receiver
Asalp_44130	COG2205	protein histidine kinase activity
Asalp_44170	COG0425	Belongs to the sulfur carrier protein TusA family
Asalp_44180	COG0251	oxidation-reduction process
Asalp_44190	COG2885	chlorophyll binding
Asalp_44200	COG2818	Glycosylase
Asalp_44210	COG0752	glycyl-tRNA synthetase alpha subunit
Asalp_44220	COG0751	glycine-tRNA ligase activity
Asalp_44250	COG0529	Catalyzes the synthesis of activated sulfate
Asalp_44270	COG2199	diguanylate cyclase activity
Asalp_44270	COG2202	Pas domain
Asalp_44270	COG2200	EAL domain
Asalp_44290	COG3385	transposase activity
Asalp_44310	COG0640	Transcriptional regulator
Asalp_44330	COG0814	amino acid
Asalp_44340	COG0348	domain, Protein
Asalp_44370	COG0446	pyridine nucleotide-disulphide oxidoreductase
Asalp_44380	COG0426	domain, Protein
Asalp_44380	COG1773	rubredoxin
Asalp_44390	COG3604	Transcriptional regulator
Asalp_44400	COG2188	Transcriptional regulator
Asalp_44430	COG1609	Transcriptional regulator
Asalp_44450	COG0559	Belongs to the binding-protein-dependent transport system permease family
Asalp_44510	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Asalp_44560	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
Asalp_44580	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
Asalp_44590	COG3118	belongs to the thioredoxin family
Asalp_44600	COG0513	Belongs to the DEAD box helicase family
Asalp_44610	COG0248	Ppx GppA phosphatase
Asalp_44630	COG0742	ribosomal rna small subunit methyltransferase
Asalp_44670	COG0084	hydrolase, TatD family'
Asalp_44680	COG0805	protein transport
Asalp_44690	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Asalp_44710	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Asalp_44720	COG3165	ubiquinone biosynthetic process from chorismate
Asalp_44740	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Asalp_44750	COG0402	S-adenosylhomocysteine deaminase activity
Asalp_44770	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
Asalp_44780	COG0848	biopolymer transport protein
Asalp_44790	COG0811	peptide transport
Asalp_44800	COG0811	peptide transport
Asalp_44820	COG2771	luxR family
Asalp_44830	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Asalp_44840	COG1349	DNA-binding transcription factor activity
Asalp_44850	COG0745	RESPONSE REGULATOR receiver
Asalp_44860	COG2205	protein histidine kinase activity
Asalp_44880	COG4452	Inner membrane protein CreD
Asalp_44890	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Asalp_44900	COG0355	proton-transporting ATP synthase activity, rotational mechanism
Asalp_44910	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Asalp_44920	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Asalp_44930	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Asalp_44940	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Asalp_44950	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Asalp_44970	COG0356	it plays a direct role in the translocation of protons across the membrane
Asalp_44980	COG3312	ion transport
Asalp_44990	COG1475	DNA binding
Asalp_45000	COG1192	Involved in chromosome partitioning
Asalp_45010	COG0357	Ribosomal RNA small subunit methyltransferase G
Asalp_45020	COG0445	tRNA wobble uridine modification
Asalp_45030	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Asalp_45040	COG4774	siderophore transport
Asalp_45050	COG4615	Cyclic peptide transporter
Asalp_45060	COG1120	ATPase activity
Asalp_45080	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Asalp_45100	COG4774	siderophore transport
Asalp_45110	COG4607	ABC-type enterochelin transport system periplasmic component
Asalp_45120	COG4604	ABC transporter, ATP-binding protein
Asalp_45130	COG4605	iron ion homeostasis
Asalp_45140	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Asalp_45190	COG3039	Transposase
Asalp_45250	COG3550	peptidyl-serine autophosphorylation
Asalp_45310	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Asalp_45400	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Asalp_45410	COG3041	Addiction module toxin RelE StbE family
Asalp_45440	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Asalp_45470	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Asalp_45490	COG0583	DNA-binding transcription factor activity
Asalp_45510	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Asalp_45520	COG0625	glutathione transferase activity
Asalp_45650	COG3385	transposase activity
Asalp_45690	COG1028	Short-chain dehydrogenase reductase Sdr
Asalp_45720	COG0732	type I restriction modification DNA specificity domain
Asalp_45750	COG3039	Transposase
Asalp_45800	COG4974	Belongs to the 'phage' integrase family
Asalp_45810	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Asalp_45820	COG0706	membrane insertase activity
Asalp_45830	COG0594	ribonuclease P activity
Asalp_45840	COG0230	Belongs to the bacterial ribosomal protein bL34 family