Asalp_00010 SM00382 ATPases associated with a variety of cellular activities Asalp_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain Asalp_00020 SM00480 DNA polymerase III beta subunit Asalp_00040 SM00387 Histidine kinase-like ATPases Asalp_00040 SM00433 TopoisomeraseII Asalp_00080 SM00342 helix_turn_helix, arabinose operon control protein Asalp_00140 SM00342 helix_turn_helix, arabinose operon control protein Asalp_00160 SM00448 cheY-homologous receiver domain Asalp_00160 SM00862 Transcriptional regulatory protein, C terminal Asalp_00170 SM00387 Histidine kinase-like ATPases Asalp_00170 SM00388 His Kinase A (phosphoacceptor) domain Asalp_00230 SM00091 PAS domain Asalp_00230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_00230 SM00387 Histidine kinase-like ATPases Asalp_00280 SM00458 Ricin-type beta-trefoil Asalp_00320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_00320 SM00954 Region found in RelA / SpoT proteins Asalp_00330 SM01409 Asalp_00330 Asalp_00340 SM00072 Guanylate kinase homologues. Asalp_00370 SM00267 diguanylate cyclase Asalp_00470 SM00028 Tetratricopeptide repeats Asalp_00470 SM00267 diguanylate cyclase Asalp_00510 SM00387 Histidine kinase-like ATPases Asalp_00520 SM00448 cheY-homologous receiver domain Asalp_00520 SM00850 LytTr DNA-binding domain Asalp_00550 SM01001 AIR carboxylase Asalp_00610 SM00360 RNA recognition motif Asalp_00620 SM00881 CoA binding domain Asalp_00780 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Asalp_00780 SM01232 Asalp_00780 Asalp_00880 SM00354 helix_turn _helix lactose operon repressor Asalp_00890 SM00829 Enoylreductase Asalp_00960 SM00563 Phosphate acyltransferases Asalp_01040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_01040 SM00387 Histidine kinase-like ATPases Asalp_01040 SM00388 His Kinase A (phosphoacceptor) domain Asalp_01050 SM00448 cheY-homologous receiver domain Asalp_01050 SM00862 Transcriptional regulatory protein, C terminal Asalp_01070 SM00971 Serine acetyltransferase, N-terminal Asalp_01120 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Asalp_01120 SM00474 3'-5' exonuclease Asalp_01120 SM00475 5'-3' exonuclease Asalp_01120 SM00482 DNA polymerase A domain Asalp_01200 SM00829 Enoylreductase Asalp_01260 SM00382 ATPases associated with a variety of cellular activities Asalp_01420 SM00749 bacterial OsmY and nodulation domain Asalp_01510 SM00342 helix_turn_helix, arabinose operon control protein Asalp_01540 SM00530 Helix-turn-helix XRE-family like proteins Asalp_01570 SM00530 Helix-turn-helix XRE-family like proteins Asalp_01720 SM00257 Lysin motif Asalp_01760 SM01001 AIR carboxylase Asalp_01850 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_01870 SM00382 ATPases associated with a variety of cellular activities Asalp_01870 SM00448 cheY-homologous receiver domain Asalp_01880 SM00091 PAS domain Asalp_01880 SM00387 Histidine kinase-like ATPases Asalp_01880 SM00388 His Kinase A (phosphoacceptor) domain Asalp_01900 SM01230 Asalp_01900 Asalp_02000 SM00487 DEAD-like helicases superfamily Asalp_02000 SM00490 helicase superfamily c-terminal domain Asalp_02020 SM00155 Phospholipase D. Active site motifs. Asalp_02070 SM00354 helix_turn _helix lactose operon repressor Asalp_02090 SM01126 Asalp_02090 Asalp_02120 SM00450 Rhodanese Homology Domain Asalp_02220 SM00316 Ribosomal protein S1-like RNA-binding domain Asalp_02220 SM00732 Likely ribonuclease with RNase H fold. Asalp_02240 SM00448 cheY-homologous receiver domain Asalp_02240 SM00862 Transcriptional regulatory protein, C terminal Asalp_02250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_02250 SM00387 Histidine kinase-like ATPases Asalp_02250 SM00388 His Kinase A (phosphoacceptor) domain Asalp_02270 SM01403 Asalp_02270 Asalp_02310 SM01382 Asalp_02310 Asalp_02310 SM01383 Asalp_02310 Asalp_02340 SM00322 K homology RNA-binding domain Asalp_02380 SM01374 Asalp_02380 Asalp_02520 SM00363 S4 RNA-binding domain Asalp_02520 SM01390 Asalp_02520 Asalp_02530 SM00662 RNA polymerases D Asalp_02550 SM00382 ATPases associated with a variety of cellular activities Asalp_02810 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_02830 SM00155 Phospholipase D. Active site motifs. Asalp_02900 SM00382 ATPases associated with a variety of cellular activities Asalp_02900 SM00962 SRP54-type protein, GTPase domain Asalp_02900 SM00963 SRP54-type protein, helical bundle domain Asalp_02910 SM00382 ATPases associated with a variety of cellular activities Asalp_02950 SM00947 Carbonic anhydrase Asalp_02960 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_02960 SM00866 Asalp_02960 Asalp_03050 SM00052 Putative diguanylate phosphodiesterase Asalp_03050 SM00267 diguanylate cyclase Asalp_03110 SM00965 Secretin and TonB N terminus short domain Asalp_03140 SM00382 ATPases associated with a variety of cellular activities Asalp_03280 SM00316 Ribosomal protein S1-like RNA-binding domain Asalp_03300 SM00886 Stress responsive A/B Barrel Domain Asalp_03370 SM00448 cheY-homologous receiver domain Asalp_03370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_03390 SM00331 Sigma factor PP2C-like phosphatases Asalp_03390 SM00387 Histidine kinase-like ATPases Asalp_03410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_03410 SM00091 PAS domain Asalp_03500 SM01018 B12 binding domain Asalp_03520 SM00388 His Kinase A (phosphoacceptor) domain Asalp_03530 SM00448 cheY-homologous receiver domain Asalp_03530 SM00862 Transcriptional regulatory protein, C terminal Asalp_03570 SM00999 Aerolysin toxin Asalp_03630 SM00876 Biotin and Thiamin Synthesis associated domain Asalp_03910 SM01219 Asalp_03910 Asalp_03990 SM00100 Cyclic nucleotide-monophosphate binding domain Asalp_04050 SM00382 ATPases associated with a variety of cellular activities Asalp_04070 SM00852 Probable molybdopterin binding domain Asalp_04110 SM00344 helix_turn_helix ASNC type Asalp_04170 SM00642 Alpha-amylase domain Asalp_04510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Asalp_04610 SM00487 DEAD-like helicases superfamily Asalp_04610 SM00490 helicase superfamily c-terminal domain Asalp_04690 SM00271 DnaJ molecular chaperone homology domain Asalp_04770 SM00357 Cold shock protein domain Asalp_04770 SM00955 Asalp_04770 Asalp_04810 SM00421 helix_turn_helix, Lux Regulon Asalp_04880 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_04880 SM00895 Asalp_04880 Asalp_04910 SM00363 S4 RNA-binding domain Asalp_04940 SM00382 ATPases associated with a variety of cellular activities Asalp_05060 SM00421 helix_turn_helix, Lux Regulon Asalp_05130 SM00342 helix_turn_helix, arabinose operon control protein Asalp_05230 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_05250 SM00450 Rhodanese Homology Domain Asalp_05310 SM00382 ATPases associated with a variety of cellular activities Asalp_05330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Asalp_05380 SM01091 Transporter associated domain Asalp_05540 SM01133 Asalp_05540 Asalp_05550 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Asalp_05620 SM00382 ATPases associated with a variety of cellular activities Asalp_05670 SM00255 Toll - interleukin 1 - resistance Asalp_05810 SM01152 Asalp_05810 Asalp_05850 SM00382 ATPases associated with a variety of cellular activities Asalp_05880 SM00487 DEAD-like helicases superfamily Asalp_05880 SM00490 helicase superfamily c-terminal domain Asalp_05970 SM00411 bacterial (prokaryotic) histone like domain Asalp_05990 SM00849 Metallo-beta-lactamase superfamily Asalp_06010 SM00487 DEAD-like helicases superfamily Asalp_06010 SM00490 helicase superfamily c-terminal domain Asalp_06130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_06130 SM00387 Histidine kinase-like ATPases Asalp_06130 SM00388 His Kinase A (phosphoacceptor) domain Asalp_06140 SM00448 cheY-homologous receiver domain Asalp_06140 SM00862 Transcriptional regulatory protein, C terminal Asalp_06160 SM00382 ATPases associated with a variety of cellular activities Asalp_06200 SM00822 Asalp_06200 Asalp_06270 SM00420 helix_turn_helix, Deoxyribose operon repressor Asalp_06270 SM01134 Asalp_06270 Asalp_06320 SM00829 Enoylreductase Asalp_06340 SM00347 helix_turn_helix multiple antibiotic resistance protein Asalp_06370 SM00344 helix_turn_helix ASNC type Asalp_06500 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_06650 SM00382 ATPases associated with a variety of cellular activities Asalp_06660 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_06680 SM00244 prohibitin homologues Asalp_06750 SM00091 PAS domain Asalp_06750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_06790 SM00382 ATPases associated with a variety of cellular activities Asalp_06870 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Asalp_07050 SM00838 Elongation factor G C-terminus Asalp_07070 SM00358 Double-stranded RNA binding motif Asalp_07070 SM00535 Ribonuclease III family Asalp_07110 SM00644 Asalp_07110 Asalp_07130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_07130 SM00387 Histidine kinase-like ATPases Asalp_07130 SM00388 His Kinase A (phosphoacceptor) domain Asalp_07130 SM00448 cheY-homologous receiver domain Asalp_07150 SM00954 Region found in RelA / SpoT proteins Asalp_07180 SM01192 Asalp_07180 Asalp_07180 SM01193 Asalp_07180 Asalp_07260 SM00257 Lysin motif Asalp_07310 SM00400 zinc finger Asalp_07310 SM00493 Asalp_07310 Asalp_07310 SM00766 DNA primase DnaG DnaB-binding Asalp_07440 SM00382 ATPases associated with a variety of cellular activities Asalp_07590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Asalp_07620 SM00927 DNA mismatch repair enzyme MutH Asalp_07680 SM00382 ATPases associated with a variety of cellular activities Asalp_07680 SM00962 SRP54-type protein, GTPase domain Asalp_07680 SM00963 SRP54-type protein, helical bundle domain Asalp_07700 SM01091 Transporter associated domain Asalp_07730 SM00671 Sel1-like repeats. Asalp_07790 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_07790 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Asalp_07800 SM00382 ATPases associated with a variety of cellular activities Asalp_07830 SM00382 ATPases associated with a variety of cellular activities Asalp_07860 SM00938 Nitrogen regulatory protein P-II Asalp_07990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_07990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_08020 SM00487 DEAD-like helicases superfamily Asalp_08020 SM00490 helicase superfamily c-terminal domain Asalp_08180 SM00245 tail specific protease Asalp_08310 SM00382 ATPases associated with a variety of cellular activities Asalp_08370 SM01266 Asalp_08370 Asalp_08470 SM00859 Semialdehyde dehydrogenase, NAD binding domain Asalp_08530 SM00382 ATPases associated with a variety of cellular activities Asalp_08550 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Asalp_08560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Asalp_08560 SM00534 ATPase domain of DNA mismatch repair MUTS family Asalp_08590 SM00347 helix_turn_helix multiple antibiotic resistance protein Asalp_08670 SM00382 ATPases associated with a variety of cellular activities Asalp_08710 SM00986 Uracil DNA glycosylase superfamily Asalp_08710 SM00987 UreE urease accessory protein, C-terminal domain Asalp_08780 SM00563 Phosphate acyltransferases Asalp_08840 SM00271 DnaJ molecular chaperone homology domain Asalp_08960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Asalp_09030 SM00746 metallochaperone-like domain Asalp_09060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_09060 SM00387 Histidine kinase-like ATPases Asalp_09060 SM00388 His Kinase A (phosphoacceptor) domain Asalp_09070 SM00448 cheY-homologous receiver domain Asalp_09070 SM00862 Transcriptional regulatory protein, C terminal Asalp_09180 SM00530 Helix-turn-helix XRE-family like proteins Asalp_09260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Asalp_09290 SM00904 Riboflavin kinase Asalp_09460 SM00938 Nitrogen regulatory protein P-II Asalp_09490 SM00267 diguanylate cyclase Asalp_09500 SM00316 Ribosomal protein S1-like RNA-binding domain Asalp_09500 SM00357 Cold shock protein domain Asalp_09500 SM00955 Asalp_09500 Asalp_09510 SM00967 RNA 2'-O ribose methyltransferase substrate binding Asalp_09660 SM00829 Enoylreductase Asalp_09760 SM00382 ATPases associated with a variety of cellular activities Asalp_09770 SM00327 von Willebrand factor (vWF) type A domain Asalp_09790 SM00344 helix_turn_helix ASNC type Asalp_09800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_09800 SM00267 diguanylate cyclase Asalp_09810 SM00028 Tetratricopeptide repeats Asalp_09810 SM00267 diguanylate cyclase Asalp_09830 SM00347 helix_turn_helix multiple antibiotic resistance protein Asalp_09870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_09870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_09880 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Asalp_09890 SM00382 ATPases associated with a variety of cellular activities Asalp_10010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_10010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_10040 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Asalp_10060 SM00642 Alpha-amylase domain Asalp_10070 SM00642 Alpha-amylase domain Asalp_10090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_10090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_10110 SM00287 Bacterial SH3 domain homologues Asalp_10200 SM00382 ATPases associated with a variety of cellular activities Asalp_10310 SM00487 DEAD-like helicases superfamily Asalp_10310 SM00490 helicase superfamily c-terminal domain Asalp_10310 SM00847 Helicase associated domain (HA2) Add an annotation Asalp_10370 SM00448 cheY-homologous receiver domain Asalp_10370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_10390 SM00014 Acid phosphatase homologues Asalp_10490 SM00670 Large family of predicted nucleotide-binding domains Asalp_10500 SM00382 ATPases associated with a variety of cellular activities Asalp_10580 SM01329 Asalp_10580 Asalp_10590 SM00917 LeuA allosteric (dimerisation) domain Asalp_10610 SM00014 Acid phosphatase homologues Asalp_10720 SM01130 Asalp_10720 Asalp_10810 SM00073 Histidine Phosphotransfer domain Asalp_10810 SM00091 PAS domain Asalp_10810 SM00387 Histidine kinase-like ATPases Asalp_10810 SM00388 His Kinase A (phosphoacceptor) domain Asalp_10810 SM00448 cheY-homologous receiver domain Asalp_10820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_10840 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_10840 SM00073 Histidine Phosphotransfer domain Asalp_10840 SM00091 PAS domain Asalp_10840 SM00387 Histidine kinase-like ATPases Asalp_10840 SM00388 His Kinase A (phosphoacceptor) domain Asalp_10840 SM00448 cheY-homologous receiver domain Asalp_10870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_10870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_10890 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Asalp_10920 SM00382 ATPases associated with a variety of cellular activities Asalp_10920 SM00930 Asalp_10920 Asalp_10980 SM00257 Lysin motif Asalp_10980 SM00646 Asalp_10980 Asalp_11000 SM00853 MutL C terminal dimerisation domain Asalp_11000 SM01340 Asalp_11000 Asalp_11040 SM00244 prohibitin homologues Asalp_11050 SM00244 prohibitin homologues Asalp_11140 SM01126 Asalp_11140 Asalp_11190 SM00530 Helix-turn-helix XRE-family like proteins Asalp_11220 SM00650 Ribosomal RNA adenine dimethylases Asalp_11280 SM00271 DnaJ molecular chaperone homology domain Asalp_11310 SM00382 ATPases associated with a variety of cellular activities Asalp_11350 SM00382 ATPases associated with a variety of cellular activities Asalp_11470 SM00530 Helix-turn-helix XRE-family like proteins Asalp_11490 SM00387 Histidine kinase-like ATPases Asalp_11490 SM00388 His Kinase A (phosphoacceptor) domain Asalp_11490 SM00448 cheY-homologous receiver domain Asalp_11500 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Asalp_11500 SM00495 Chitin-binding domain type 3 Asalp_11500 SM00636 Asalp_11500 Asalp_11520 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Asalp_11520 SM00495 Chitin-binding domain type 3 Asalp_11540 SM00100 Cyclic nucleotide-monophosphate binding domain Asalp_11540 SM00419 helix_turn_helix, cAMP Regulatory protein Asalp_11660 SM00984 UDP binding domain Asalp_11680 SM00267 diguanylate cyclase Asalp_11700 SM00260 Two component signalling adaptor domain Asalp_11700 SM00448 cheY-homologous receiver domain Asalp_11760 SM00320 WD40 repeats Asalp_11780 SM00382 ATPases associated with a variety of cellular activities Asalp_11780 SM00448 cheY-homologous receiver domain Asalp_11830 SM00052 Putative diguanylate phosphodiesterase Asalp_11840 SM00978 Asalp_11840 Asalp_11870 SM00382 ATPases associated with a variety of cellular activities Asalp_11880 SM01005 Alanine racemase, C-terminal domain Asalp_11980 SM00421 helix_turn_helix, Lux Regulon Asalp_11980 SM00448 cheY-homologous receiver domain Asalp_11990 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_11990 SM00387 Histidine kinase-like ATPases Asalp_11990 SM00388 His Kinase A (phosphoacceptor) domain Asalp_11990 SM00448 cheY-homologous receiver domain Asalp_12020 SM00448 cheY-homologous receiver domain Asalp_12040 SM00138 Methyltransferase, chemotaxis proteins Asalp_12050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_12050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_12060 SM00260 Two component signalling adaptor domain Asalp_12080 SM00073 Histidine Phosphotransfer domain Asalp_12080 SM00260 Two component signalling adaptor domain Asalp_12080 SM00387 Histidine kinase-like ATPases Asalp_12080 SM01231 Asalp_12080 Asalp_12100 SM00448 cheY-homologous receiver domain Asalp_12110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_12200 SM00342 helix_turn_helix, arabinose operon control protein Asalp_12200 SM00478 endonuclease III Asalp_12200 SM01009 AlkA N-terminal domain Asalp_12230 SM00463 Small MutS-related domain Asalp_12290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_12370 SM00830 Chorismate mutase type II Asalp_12440 SM00422 helix_turn_helix, mercury resistance Asalp_12630 SM00900 Asalp_12630 Asalp_12650 SM00710 Parallel beta-helix repeats Asalp_12650 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses Asalp_12740 SM01068 Putative carbohydrate binding domain Asalp_12920 SM00900 Asalp_12920 Asalp_13000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_13000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_13060 SM01329 Asalp_13060 Asalp_13070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Asalp_13070 SM00475 5'-3' exonuclease Asalp_13090 SM00267 diguanylate cyclase Asalp_13100 SM00028 Tetratricopeptide repeats Asalp_13280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_13370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Asalp_13390 SM00935 Outer membrane protein (OmpH-like) Asalp_13450 SM00481 DNA polymerase alpha chain like domain Asalp_13470 SM00862 Transcriptional regulatory protein, C terminal Asalp_13560 SM00382 ATPases associated with a variety of cellular activities Asalp_13600 SM00977 TilS substrate C-terminal domain Asalp_13610 SM00267 diguanylate cyclase Asalp_13670 SM00421 helix_turn_helix, Lux Regulon Asalp_13670 SM00448 cheY-homologous receiver domain Asalp_13690 SM00642 Alpha-amylase domain Asalp_13700 SM00342 helix_turn_helix, arabinose operon control protein Asalp_13720 SM00788 Adenylosuccinate synthetase Asalp_13810 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Asalp_13810 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Asalp_13810 SM00493 Asalp_13810 Asalp_13840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_13880 SM00382 ATPases associated with a variety of cellular activities Asalp_13890 SM00382 ATPases associated with a variety of cellular activities Asalp_13930 SM00091 PAS domain Asalp_13930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_13930 SM00387 Histidine kinase-like ATPases Asalp_13930 SM00388 His Kinase A (phosphoacceptor) domain Asalp_13930 SM00448 cheY-homologous receiver domain Asalp_14010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_14010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_14020 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_14040 SM00852 Probable molybdopterin binding domain Asalp_14060 SM00382 ATPases associated with a variety of cellular activities Asalp_14090 SM00382 ATPases associated with a variety of cellular activities Asalp_14090 SM00448 cheY-homologous receiver domain Asalp_14100 SM00387 Histidine kinase-like ATPases Asalp_14100 SM00388 His Kinase A (phosphoacceptor) domain Asalp_14220 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Asalp_14260 SM00919 Malic enzyme, NAD binding domain Asalp_14260 SM01274 Asalp_14260 Asalp_14280 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_14290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_14290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_14440 SM00267 diguanylate cyclase Asalp_14490 SM00382 ATPases associated with a variety of cellular activities Asalp_14560 SM00382 ATPases associated with a variety of cellular activities Asalp_14570 SM00382 ATPases associated with a variety of cellular activities Asalp_14580 SM00448 cheY-homologous receiver domain Asalp_14580 SM00862 Transcriptional regulatory protein, C terminal Asalp_14710 SM01321 Asalp_14710 Asalp_14860 SM00530 Helix-turn-helix XRE-family like proteins Asalp_14940 SM00528 Domain in histone-like proteins of HNS family Asalp_14980 SM00382 ATPases associated with a variety of cellular activities Asalp_15010 SM01131 Asalp_15010 Asalp_15060 SM00271 DnaJ molecular chaperone homology domain Asalp_15100 SM00640 Glycosyl hydrolases family 32 Asalp_15110 SM00354 helix_turn _helix lactose operon repressor Asalp_15150 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Asalp_15200 SM00091 PAS domain Asalp_15200 SM00267 diguanylate cyclase Asalp_15320 SM00028 Tetratricopeptide repeats Asalp_15320 SM00448 cheY-homologous receiver domain Asalp_15560 SM00342 helix_turn_helix, arabinose operon control protein Asalp_15570 SM01329 Asalp_15570 Asalp_15700 SM00506 Appr-1"-p processing enzyme Asalp_15710 SM00487 DEAD-like helicases superfamily Asalp_15920 SM00530 Helix-turn-helix XRE-family like proteins Asalp_15960 SM00528 Domain in histone-like proteins of HNS family Asalp_16070 SM00858 Asalp_16070 Asalp_16110 SM00382 ATPases associated with a variety of cellular activities Asalp_16250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_16250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_16300 SM01091 Transporter associated domain Asalp_16410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_16440 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_16440 SM00876 Biotin and Thiamin Synthesis associated domain Asalp_16490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_16530 SM00890 Domain of unknown function Asalp_16680 SM00458 Ricin-type beta-trefoil Asalp_16840 SM01081 Putative carbohydrate binding domain Asalp_16960 SM00347 helix_turn_helix multiple antibiotic resistance protein Asalp_16990 SM00382 ATPases associated with a variety of cellular activities Asalp_17120 SM00052 Putative diguanylate phosphodiesterase Asalp_17120 SM00091 PAS domain Asalp_17120 SM00267 diguanylate cyclase Asalp_17140 SM00354 helix_turn _helix lactose operon repressor Asalp_17190 SM00257 Lysin motif Asalp_17200 SM00849 Metallo-beta-lactamase superfamily Asalp_17230 SM00479 Asalp_17230 Asalp_17250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_17310 SM00897 FIST N domain Asalp_17310 SM01204 Asalp_17310 Asalp_17320 SM00387 Histidine kinase-like ATPases Asalp_17320 SM00388 His Kinase A (phosphoacceptor) domain Asalp_17320 SM00448 cheY-homologous receiver domain Asalp_17330 SM00464 Found in ATP-dependent protease La (LON) Asalp_17350 SM00421 helix_turn_helix, Lux Regulon Asalp_17350 SM00448 cheY-homologous receiver domain Asalp_17360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_17360 SM00387 Histidine kinase-like ATPases Asalp_17370 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_17400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Asalp_17450 SM00852 Probable molybdopterin binding domain Asalp_17510 SM00382 ATPases associated with a variety of cellular activities Asalp_17550 SM00852 Probable molybdopterin binding domain Asalp_17580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_17580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_17620 SM00867 YceI-like domain Asalp_17640 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Asalp_17660 SM00563 Phosphate acyltransferases Asalp_17720 SM00855 Phosphoglycerate mutase family Asalp_17810 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Asalp_17830 SM00363 S4 RNA-binding domain Asalp_17840 SM00382 ATPases associated with a variety of cellular activities Asalp_17910 SM00871 Bacterial transcription activator, effector binding domain Asalp_17980 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_18150 SM00420 helix_turn_helix, Deoxyribose operon repressor Asalp_18150 SM01134 Asalp_18150 Asalp_18200 SM00830 Chorismate mutase type II Asalp_18350 SM00382 ATPases associated with a variety of cellular activities Asalp_18460 SM00382 ATPases associated with a variety of cellular activities Asalp_18470 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_18470 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Asalp_18530 SM00052 Putative diguanylate phosphodiesterase Asalp_18530 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_18530 SM00091 PAS domain Asalp_18530 SM00267 diguanylate cyclase Asalp_18540 SM00450 Rhodanese Homology Domain Asalp_18550 SM01359 Asalp_18550 Asalp_18550 SM01360 Asalp_18550 Asalp_18580 SM00981 Asalp_18580 Asalp_18730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_18730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_18810 SM00382 ATPases associated with a variety of cellular activities Asalp_18950 SM00357 Cold shock protein domain Asalp_18970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_18970 SM00387 Histidine kinase-like ATPases Asalp_18970 SM00388 His Kinase A (phosphoacceptor) domain Asalp_18980 SM00448 cheY-homologous receiver domain Asalp_18980 SM00862 Transcriptional regulatory protein, C terminal Asalp_19000 SM00095 Transthyretin Asalp_19060 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_19090 SM01323 Asalp_19090 Asalp_19120 SM00450 Rhodanese Homology Domain Asalp_19130 SM00028 Tetratricopeptide repeats Asalp_19240 SM00271 DnaJ molecular chaperone homology domain Asalp_19290 SM00562 Asalp_19290 Asalp_19310 SM00028 Tetratricopeptide repeats Asalp_19320 SM00530 Helix-turn-helix XRE-family like proteins Asalp_19360 SM00564 beta-propeller repeat Asalp_19370 SM00382 ATPases associated with a variety of cellular activities Asalp_19400 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_19420 SM01211 Asalp_19420 Asalp_19510 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_19700 SM00382 ATPases associated with a variety of cellular activities Asalp_19940 SM00671 Sel1-like repeats. Asalp_19970 SM00530 Helix-turn-helix XRE-family like proteins Asalp_20070 SM00530 Helix-turn-helix XRE-family like proteins Asalp_20110 SM00382 ATPases associated with a variety of cellular activities Asalp_20140 SM01321 Asalp_20140 Asalp_20240 SM00487 DEAD-like helicases superfamily Asalp_20240 SM00490 helicase superfamily c-terminal domain Asalp_20310 SM01126 Asalp_20310 Asalp_20570 SM00354 helix_turn _helix lactose operon repressor Asalp_20610 SM00382 ATPases associated with a variety of cellular activities Asalp_20750 SM00487 DEAD-like helicases superfamily Asalp_20750 SM00490 helicase superfamily c-terminal domain Asalp_20770 SM01351 Asalp_20770 Asalp_20800 SM00422 helix_turn_helix, mercury resistance Asalp_20880 SM00327 von Willebrand factor (vWF) type A domain Asalp_20960 SM00342 helix_turn_helix, arabinose operon control protein Asalp_20970 SM01217 Asalp_20970 Asalp_21060 SM00014 Acid phosphatase homologues Asalp_21090 SM00859 Semialdehyde dehydrogenase, NAD binding domain Asalp_21200 SM00487 DEAD-like helicases superfamily Asalp_21390 SM00857 Resolvase, N terminal domain Asalp_21440 SM00528 Domain in histone-like proteins of HNS family Asalp_21470 SM00382 ATPases associated with a variety of cellular activities Asalp_21750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_21760 SM00267 diguanylate cyclase Asalp_21820 SM00382 ATPases associated with a variety of cellular activities Asalp_21860 SM01038 Beta galactosidase small chain Asalp_21890 SM00487 DEAD-like helicases superfamily Asalp_21890 SM00490 helicase superfamily c-terminal domain Asalp_21920 SM00357 Cold shock protein domain Asalp_21940 SM00382 ATPases associated with a variety of cellular activities Asalp_21940 SM01086 C-terminal, D2-small domain, of ClpB protein Asalp_21950 SM00316 Ribosomal protein S1-like RNA-binding domain Asalp_21990 SM00267 diguanylate cyclase Asalp_21990 SM00448 cheY-homologous receiver domain Asalp_22040 SM00344 helix_turn_helix ASNC type Asalp_22050 SM00843 Asalp_22050 Asalp_22070 SM00382 ATPases associated with a variety of cellular activities Asalp_22120 SM00382 ATPases associated with a variety of cellular activities Asalp_22130 SM00382 ATPases associated with a variety of cellular activities Asalp_22170 SM00382 ATPases associated with a variety of cellular activities Asalp_22250 SM00091 PAS domain Asalp_22250 SM00382 ATPases associated with a variety of cellular activities Asalp_22270 SM00267 diguanylate cyclase Asalp_22410 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_22460 SM01007 Class II Aldolase and Adducin N-terminal domain Asalp_22490 SM00382 ATPases associated with a variety of cellular activities Asalp_22510 SM00342 helix_turn_helix, arabinose operon control protein Asalp_22620 SM00825 Beta-ketoacyl synthase Asalp_22700 SM00861 Transketolase, pyrimidine binding domain Asalp_22730 SM00881 CoA binding domain Asalp_22800 SM00859 Semialdehyde dehydrogenase, NAD binding domain Asalp_22890 SM00822 Asalp_22890 Asalp_22900 SM00342 helix_turn_helix, arabinose operon control protein Asalp_22900 SM00871 Bacterial transcription activator, effector binding domain Asalp_22960 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_23160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_23160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_23160 SM01049 Asalp_23160 Asalp_23180 SM00387 Histidine kinase-like ATPases Asalp_23190 SM00448 cheY-homologous receiver domain Asalp_23240 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_23260 SM00487 DEAD-like helicases superfamily Asalp_23260 SM00490 helicase superfamily c-terminal domain Asalp_23330 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_23360 SM00763 PrkA AAA domain Asalp_23370 SM00487 DEAD-like helicases superfamily Asalp_23370 SM00490 helicase superfamily c-terminal domain Asalp_23500 SM00387 Histidine kinase-like ATPases Asalp_23500 SM00388 His Kinase A (phosphoacceptor) domain Asalp_23500 SM00448 cheY-homologous receiver domain Asalp_23510 SM00382 ATPases associated with a variety of cellular activities Asalp_23520 SM00382 ATPases associated with a variety of cellular activities Asalp_23660 SM01118 Asalp_23660 Asalp_23720 SM00487 DEAD-like helicases superfamily Asalp_23720 SM00490 helicase superfamily c-terminal domain Asalp_23740 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Asalp_23770 SM01144 Asalp_23770 Asalp_23810 SM00342 helix_turn_helix, arabinose operon control protein Asalp_23840 SM00642 Alpha-amylase domain Asalp_24100 SM00421 helix_turn_helix, Lux Regulon Asalp_24100 SM00448 cheY-homologous receiver domain Asalp_24190 SM01322 Asalp_24190 Asalp_24220 SM00382 ATPases associated with a variety of cellular activities Asalp_24270 SM00237 Domains in Na-Ca exchangers and integrin-beta4 Asalp_24370 SM00073 Histidine Phosphotransfer domain Asalp_24370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_24370 SM00091 PAS domain Asalp_24370 SM00387 Histidine kinase-like ATPases Asalp_24370 SM00388 His Kinase A (phosphoacceptor) domain Asalp_24370 SM00448 cheY-homologous receiver domain Asalp_24380 SM00091 PAS domain Asalp_24390 SM00448 cheY-homologous receiver domain Asalp_24390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_24470 SM00491 Asalp_24470 Asalp_24520 SM00341 Helicase and RNase D C-terminal Asalp_24520 SM00474 3'-5' exonuclease Asalp_24530 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_24580 SM00382 ATPases associated with a variety of cellular activities Asalp_24660 SM00421 helix_turn_helix, Lux Regulon Asalp_24670 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_24680 SM00382 ATPases associated with a variety of cellular activities Asalp_24680 SM00487 DEAD-like helicases superfamily Asalp_24680 SM00490 helicase superfamily c-terminal domain Asalp_24680 SM00847 Helicase associated domain (HA2) Add an annotation Asalp_24710 SM00849 Metallo-beta-lactamase superfamily Asalp_24720 SM00450 Rhodanese Homology Domain Asalp_24740 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_24760 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Asalp_24770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_24850 SM00316 Ribosomal protein S1-like RNA-binding domain Asalp_24870 SM00363 S4 RNA-binding domain Asalp_24940 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Asalp_24950 SM00822 Asalp_24950 Asalp_24970 SM00825 Beta-ketoacyl synthase Asalp_25010 SM00382 ATPases associated with a variety of cellular activities Asalp_25190 SM00822 Asalp_25190 Asalp_25280 SM00530 Helix-turn-helix XRE-family like proteins Asalp_25300 SM00857 Resolvase, N terminal domain Asalp_25340 SM00422 helix_turn_helix, mercury resistance Asalp_25390 SM00422 helix_turn_helix, mercury resistance Asalp_25580 SM00382 ATPases associated with a variety of cellular activities Asalp_25600 SM00981 Asalp_25600 Asalp_25660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Asalp_25660 SM00245 tail specific protease Asalp_25670 SM00945 ProQ/FINO family Asalp_25780 SM00100 Cyclic nucleotide-monophosphate binding domain Asalp_25780 SM00419 helix_turn_helix, cAMP Regulatory protein Asalp_25850 SM00382 ATPases associated with a variety of cellular activities Asalp_25890 SM00354 helix_turn _helix lactose operon repressor Asalp_25900 SM00267 diguanylate cyclase Asalp_25940 SM00448 cheY-homologous receiver domain Asalp_25950 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_25950 SM00387 Histidine kinase-like ATPases Asalp_25950 SM00388 His Kinase A (phosphoacceptor) domain Asalp_25950 SM00448 cheY-homologous receiver domain Asalp_25960 SM00411 bacterial (prokaryotic) histone like domain Asalp_25970 SM00873 B3/4 domain Asalp_25970 SM00874 tRNA synthetase B5 domain Asalp_25970 SM00896 Ferredoxin-fold anticodon binding domain Asalp_26020 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Asalp_26040 SM00671 Sel1-like repeats. Asalp_26050 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_26080 SM00434 DNA Topoisomerase IV Asalp_26150 SM00925 MltA specific insert domain Asalp_26210 SM00354 helix_turn _helix lactose operon repressor Asalp_26240 SM00953 Asalp_26240 Asalp_26250 SM00487 DEAD-like helicases superfamily Asalp_26250 SM00490 helicase superfamily c-terminal domain Asalp_26300 SM00463 Small MutS-related domain Asalp_26350 SM00382 ATPases associated with a variety of cellular activities Asalp_26400 SM00782 PhnA Zinc-Ribbon Asalp_26460 SM00327 von Willebrand factor (vWF) type A domain Asalp_26470 SM00028 Tetratricopeptide repeats Asalp_26530 SM00052 Putative diguanylate phosphodiesterase Asalp_26550 SM00422 helix_turn_helix, mercury resistance Asalp_26560 SM00857 Resolvase, N terminal domain Asalp_26980 SM00347 helix_turn_helix multiple antibiotic resistance protein Asalp_27100 SM00486 DNA polymerase type-B family Asalp_27120 SM00267 diguanylate cyclase Asalp_27140 SM00090 RIO-like kinase Asalp_27200 SM00518 AP endonuclease family 2 Asalp_27220 SM00822 Asalp_27220 Asalp_27260 SM00382 ATPases associated with a variety of cellular activities Asalp_27290 SM00267 diguanylate cyclase Asalp_27310 SM00749 bacterial OsmY and nodulation domain Asalp_27360 SM00100 Cyclic nucleotide-monophosphate binding domain Asalp_27360 SM00419 helix_turn_helix, cAMP Regulatory protein Asalp_27570 SM00822 Asalp_27570 Asalp_27660 SM00878 Biotin carboxylase C-terminal domain Asalp_27660 SM01209 Asalp_27660 Asalp_27680 SM00422 helix_turn_helix, mercury resistance Asalp_27690 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_27770 SM00479 Asalp_27770 Asalp_27780 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_27910 SM00382 ATPases associated with a variety of cellular activities Asalp_27940 SM00411 bacterial (prokaryotic) histone like domain Asalp_27950 SM00382 ATPases associated with a variety of cellular activities Asalp_27950 SM00464 Found in ATP-dependent protease La (LON) Asalp_27960 SM00382 ATPases associated with a variety of cellular activities Asalp_27960 SM00994 ClpX C4-type zinc finger Asalp_27960 SM01086 C-terminal, D2-small domain, of ClpB protein Asalp_28010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_28030 SM00382 ATPases associated with a variety of cellular activities Asalp_28110 SM00855 Phosphoglycerate mutase family Asalp_28140 SM00369 Leucine-rich repeats, typical (most populated) subfamily Asalp_28160 SM00342 helix_turn_helix, arabinose operon control protein Asalp_28230 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_28230 SM01240 Asalp_28230 Asalp_28310 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_28320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_28320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_28360 SM00893 Electron transfer flavoprotein domain Asalp_28370 SM00893 Electron transfer flavoprotein domain Asalp_28470 SM00382 ATPases associated with a variety of cellular activities Asalp_28510 SM00823 Phosphopantetheine attachment site Asalp_28520 SM00822 Asalp_28520 Asalp_28530 SM00823 Phosphopantetheine attachment site Asalp_28600 SM00052 Putative diguanylate phosphodiesterase Asalp_28600 SM00267 diguanylate cyclase Asalp_28630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_28630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_28630 SM01049 Asalp_28630 Asalp_28680 SM00387 Histidine kinase-like ATPases Asalp_28690 SM00493 Asalp_28690 Asalp_28710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Asalp_28710 SM00382 ATPases associated with a variety of cellular activities Asalp_28750 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Asalp_28990 SM00382 ATPases associated with a variety of cellular activities Asalp_29000 SM00382 ATPases associated with a variety of cellular activities Asalp_29130 SM01005 Alanine racemase, C-terminal domain Asalp_29140 SM00656 Asalp_29140 Asalp_29150 SM00710 Parallel beta-helix repeats Asalp_29250 SM00346 helix_turn_helix isocitrate lyase regulation Asalp_29270 SM00100 Cyclic nucleotide-monophosphate binding domain Asalp_29270 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_29280 SM00479 Asalp_29280 Asalp_29300 SM01154 Asalp_29300 Asalp_29330 SM00528 Domain in histone-like proteins of HNS family Asalp_29380 SM01144 Asalp_29380 Asalp_29400 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Asalp_29430 SM00411 bacterial (prokaryotic) histone like domain Asalp_29450 SM00316 Ribosomal protein S1-like RNA-binding domain Asalp_29540 SM00052 Putative diguanylate phosphodiesterase Asalp_29540 SM00267 diguanylate cyclase Asalp_29570 SM00448 cheY-homologous receiver domain Asalp_29610 SM00831 Cation transporter/ATPase, N-terminus Asalp_29660 SM00360 RNA recognition motif Asalp_29690 SM00382 ATPases associated with a variety of cellular activities Asalp_29710 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_29710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Asalp_29880 SM00382 ATPases associated with a variety of cellular activities Asalp_29980 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Asalp_29990 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Asalp_29990 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Asalp_30100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_30100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_30200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_30200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_30260 SM01005 Alanine racemase, C-terminal domain Asalp_30280 SM00382 ATPases associated with a variety of cellular activities Asalp_30290 SM00382 ATPases associated with a variety of cellular activities Asalp_30360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_30370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Asalp_30380 SM00448 cheY-homologous receiver domain Asalp_30380 SM00850 LytTr DNA-binding domain Asalp_30430 SM00487 DEAD-like helicases superfamily Asalp_30430 SM00490 helicase superfamily c-terminal domain Asalp_30510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_30510 SM00091 PAS domain Asalp_30510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_30580 SM00900 Asalp_30580 Asalp_30600 SM00478 endonuclease III Asalp_30600 SM00525 Asalp_30600 Asalp_30630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_30640 SM00479 Asalp_30640 Asalp_30660 SM00052 Putative diguanylate phosphodiesterase Asalp_30660 SM00267 diguanylate cyclase Asalp_30680 SM00487 DEAD-like helicases superfamily Asalp_30680 SM00490 helicase superfamily c-terminal domain Asalp_30730 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_30730 SM01091 Transporter associated domain Asalp_30830 SM00917 LeuA allosteric (dimerisation) domain Asalp_30840 SM00851 MGS-like domain Asalp_30840 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Asalp_30850 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Asalp_30950 SM00382 ATPases associated with a variety of cellular activities Asalp_30970 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_30990 SM00382 ATPases associated with a variety of cellular activities Asalp_31040 SM00899 Asalp_31040 Asalp_31100 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_31110 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_31120 SM00267 diguanylate cyclase Asalp_31180 SM00840 Asalp_31180 Asalp_31240 SM00822 Asalp_31240 Asalp_31300 SM00530 Helix-turn-helix XRE-family like proteins Asalp_31360 SM00382 ATPases associated with a variety of cellular activities Asalp_31490 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Asalp_31490 SM00465 GIY-YIG type nucleases (URI domain) Asalp_31500 SM00421 helix_turn_helix, Lux Regulon Asalp_31500 SM00448 cheY-homologous receiver domain Asalp_31540 SM00382 ATPases associated with a variety of cellular activities Asalp_31550 SM00849 Metallo-beta-lactamase superfamily Asalp_31620 SM00491 Asalp_31620 Asalp_31660 SM00098 Alkaline phosphatase homologues Asalp_31670 SM00098 Alkaline phosphatase homologues Asalp_31710 SM00421 helix_turn_helix, Lux Regulon Asalp_31710 SM00448 cheY-homologous receiver domain Asalp_31720 SM00387 Histidine kinase-like ATPases Asalp_31740 SM00267 diguanylate cyclase Asalp_31750 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_31750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Asalp_31770 SM00382 ATPases associated with a variety of cellular activities Asalp_31840 SM01091 Transporter associated domain Asalp_31860 SM00382 ATPases associated with a variety of cellular activities Asalp_32000 SM00382 ATPases associated with a variety of cellular activities Asalp_32000 SM00448 cheY-homologous receiver domain Asalp_32010 SM00091 PAS domain Asalp_32010 SM00387 Histidine kinase-like ATPases Asalp_32010 SM00388 His Kinase A (phosphoacceptor) domain Asalp_32020 SM00382 ATPases associated with a variety of cellular activities Asalp_32070 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_32070 SM00924 MgtE intracellular N domain Asalp_32100 SM00047 Lysozyme subfamily 2 Asalp_32190 SM00138 Methyltransferase, chemotaxis proteins Asalp_32200 SM00260 Two component signalling adaptor domain Asalp_32200 SM00448 cheY-homologous receiver domain Asalp_32210 SM00858 Asalp_32210 Asalp_32270 SM00363 S4 RNA-binding domain Asalp_32280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_32370 SM00357 Cold shock protein domain Asalp_32390 SM00861 Transketolase, pyrimidine binding domain Asalp_32440 SM00487 DEAD-like helicases superfamily Asalp_32440 SM00490 helicase superfamily c-terminal domain Asalp_32530 SM00984 UDP binding domain Asalp_32750 SM00363 S4 RNA-binding domain Asalp_32790 SM00481 DNA polymerase alpha chain like domain Asalp_32890 SM01126 Asalp_32890 Asalp_33090 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. Asalp_33200 SM00382 ATPases associated with a variety of cellular activities Asalp_33310 SM00382 ATPases associated with a variety of cellular activities Asalp_33330 SM00260 Two component signalling adaptor domain Asalp_33340 SM00260 Two component signalling adaptor domain Asalp_33380 SM00448 cheY-homologous receiver domain Asalp_33390 SM00073 Histidine Phosphotransfer domain Asalp_33390 SM00260 Two component signalling adaptor domain Asalp_33390 SM00387 Histidine kinase-like ATPases Asalp_33390 SM01231 Asalp_33390 Asalp_33410 SM00448 cheY-homologous receiver domain Asalp_33450 SM00382 ATPases associated with a variety of cellular activities Asalp_33450 SM00962 SRP54-type protein, GTPase domain Asalp_33570 SM00382 ATPases associated with a variety of cellular activities Asalp_33630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Asalp_33670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_33680 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_33700 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_33760 SM00382 ATPases associated with a variety of cellular activities Asalp_33780 SM00382 ATPases associated with a variety of cellular activities Asalp_33790 SM00448 cheY-homologous receiver domain Asalp_33790 SM00862 Transcriptional regulatory protein, C terminal Asalp_33800 SM00387 Histidine kinase-like ATPases Asalp_33880 SM00481 DNA polymerase alpha chain like domain Asalp_34010 SM00155 Phospholipase D. Active site motifs. Asalp_34050 SM00642 Alpha-amylase domain Asalp_34150 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_34190 SM00267 diguanylate cyclase Asalp_34220 SM00530 Helix-turn-helix XRE-family like proteins Asalp_34300 SM00919 Malic enzyme, NAD binding domain Asalp_34300 SM01274 Asalp_34300 Asalp_34310 SM00342 helix_turn_helix, arabinose operon control protein Asalp_34340 SM00267 diguanylate cyclase Asalp_34460 SM00382 ATPases associated with a variety of cellular activities Asalp_34530 SM00091 PAS domain Asalp_34530 SM00387 Histidine kinase-like ATPases Asalp_34530 SM00388 His Kinase A (phosphoacceptor) domain Asalp_34540 SM00448 cheY-homologous receiver domain Asalp_34540 SM00862 Transcriptional regulatory protein, C terminal Asalp_34580 SM00382 ATPases associated with a variety of cellular activities Asalp_34600 SM00342 helix_turn_helix, arabinose operon control protein Asalp_34650 SM00448 cheY-homologous receiver domain Asalp_34660 SM00387 Histidine kinase-like ATPases Asalp_34670 SM00919 Malic enzyme, NAD binding domain Asalp_34670 SM01274 Asalp_34670 Asalp_34710 SM00347 helix_turn_helix multiple antibiotic resistance protein Asalp_34740 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_34810 SM00292 breast cancer carboxy-terminal domain Asalp_34810 SM00532 Ligase N family Asalp_34820 SM00771 ZipA, C-terminal domain (FtsZ-binding) Asalp_34890 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_35010 SM00861 Transketolase, pyrimidine binding domain Asalp_35030 SM00731 SprT homologues. Asalp_35070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_35090 SM00732 Likely ribonuclease with RNase H fold. Asalp_35130 SM00460 Transglutaminase/protease-like homologues Asalp_35180 SM00986 Uracil DNA glycosylase superfamily Asalp_35180 SM00987 UreE urease accessory protein, C-terminal domain Asalp_35250 SM00937 Asalp_35250 Asalp_35290 SM01400 Asalp_35290 Asalp_35360 SM00100 Cyclic nucleotide-monophosphate binding domain Asalp_35370 SM01022 Asalp_35370 Asalp_35390 SM00642 Alpha-amylase domain Asalp_35420 SM00382 ATPases associated with a variety of cellular activities Asalp_35440 SM00890 Domain of unknown function Asalp_35470 SM01150 Asalp_35470 Asalp_35600 SM00965 Secretin and TonB N terminus short domain Asalp_35690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_35690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_35710 SM00849 Metallo-beta-lactamase superfamily Asalp_35890 SM01236 Asalp_35890 Asalp_35900 SM00822 Asalp_35900 Asalp_35920 SM00448 cheY-homologous receiver domain Asalp_35920 SM00862 Transcriptional regulatory protein, C terminal Asalp_35930 SM00387 Histidine kinase-like ATPases Asalp_35930 SM00388 His Kinase A (phosphoacceptor) domain Asalp_35950 SM01240 Asalp_35950 Asalp_35970 SM00841 Elongation factor P, C-terminal Asalp_35970 SM01185 Asalp_35970 Asalp_36010 SM00267 diguanylate cyclase Asalp_36060 SM00267 diguanylate cyclase Asalp_36070 SM00357 Cold shock protein domain Asalp_36100 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_36130 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_36130 SM01091 Transporter associated domain Asalp_36270 SM00936 Penicillin-binding protein 5, C-terminal domain Asalp_36300 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_36380 SM00267 diguanylate cyclase Asalp_36540 SM00267 diguanylate cyclase Asalp_36560 SM00316 Ribosomal protein S1-like RNA-binding domain Asalp_36560 SM00322 K homology RNA-binding domain Asalp_36570 SM01387 Asalp_36570 Asalp_36610 SM00316 Ribosomal protein S1-like RNA-binding domain Asalp_36680 SM00382 ATPases associated with a variety of cellular activities Asalp_36700 SM01103 Asalp_36700 Asalp_36800 SM00861 Transketolase, pyrimidine binding domain Asalp_36840 SM00382 ATPases associated with a variety of cellular activities Asalp_37040 SM00052 Putative diguanylate phosphodiesterase Asalp_37040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_37040 SM00091 PAS domain Asalp_37040 SM00267 diguanylate cyclase Asalp_37090 SM00878 Biotin carboxylase C-terminal domain Asalp_37140 SM00829 Enoylreductase Asalp_37210 SM01266 Asalp_37210 Asalp_37220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_37290 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Asalp_37310 SM00870 Asalp_37310 Asalp_37330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_37330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_37420 SM00382 ATPases associated with a variety of cellular activities Asalp_37490 SM00852 Probable molybdopterin binding domain Asalp_37510 SM00825 Beta-ketoacyl synthase Asalp_37520 SM00822 Asalp_37520 Asalp_37540 SM00825 Beta-ketoacyl synthase Asalp_37660 SM00563 Phosphate acyltransferases Asalp_37700 SM00382 ATPases associated with a variety of cellular activities Asalp_37710 SM01057 Eukaryotic-type carbonic anhydrase Asalp_37770 SM00382 ATPases associated with a variety of cellular activities Asalp_37800 SM01012 Asalp_37800 Asalp_37820 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Asalp_37880 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Asalp_37970 SM00382 ATPases associated with a variety of cellular activities Asalp_37980 SM00382 ATPases associated with a variety of cellular activities Asalp_38090 SM00028 Tetratricopeptide repeats Asalp_38100 SM00495 Chitin-binding domain type 3 Asalp_38100 SM00636 Asalp_38100 Asalp_38140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_38140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_38160 SM00357 Cold shock protein domain Asalp_38170 SM00479 Asalp_38170 Asalp_38240 SM00052 Putative diguanylate phosphodiesterase Asalp_38240 SM00091 PAS domain Asalp_38240 SM00267 diguanylate cyclase Asalp_38280 SM00862 Transcriptional regulatory protein, C terminal Asalp_38320 SM00226 Low molecular weight phosphatase family Asalp_38340 SM00267 diguanylate cyclase Asalp_38520 SM00382 ATPases associated with a variety of cellular activities Asalp_38540 SM00450 Rhodanese Homology Domain Asalp_38600 SM00052 Putative diguanylate phosphodiesterase Asalp_38630 SM00382 ATPases associated with a variety of cellular activities Asalp_38650 SM00260 Two component signalling adaptor domain Asalp_38650 SM00448 cheY-homologous receiver domain Asalp_38660 SM00327 von Willebrand factor (vWF) type A domain Asalp_38730 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Asalp_38760 SM00448 cheY-homologous receiver domain Asalp_38770 SM00448 cheY-homologous receiver domain Asalp_38780 SM00100 Cyclic nucleotide-monophosphate binding domain Asalp_38780 SM00387 Histidine kinase-like ATPases Asalp_38810 SM00382 ATPases associated with a variety of cellular activities Asalp_38880 SM00382 ATPases associated with a variety of cellular activities Asalp_38920 SM00487 DEAD-like helicases superfamily Asalp_38920 SM00490 helicase superfamily c-terminal domain Asalp_38950 SM00052 Putative diguanylate phosphodiesterase Asalp_38950 SM00267 diguanylate cyclase Asalp_38980 SM00883 Chaperonin 10 Kd subunit Asalp_39130 SM00729 Elongator protein 3, MiaB family, Radical SAM Asalp_39160 SM00422 helix_turn_helix, mercury resistance Asalp_39180 SM00798 AICARFT/IMPCHase bienzyme Asalp_39180 SM00851 MGS-like domain Asalp_39190 SM01209 Asalp_39190 Asalp_39190 SM01210 Asalp_39190 Asalp_39220 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Asalp_39220 SM00632 Asalp_39220 Asalp_39220 SM00642 Alpha-amylase domain Asalp_39230 SM00028 Tetratricopeptide repeats Asalp_39250 SM00382 ATPases associated with a variety of cellular activities Asalp_39350 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_39400 SM00478 endonuclease III Asalp_39400 SM00525 Asalp_39400 Asalp_39420 SM00382 ATPases associated with a variety of cellular activities Asalp_39430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Asalp_39460 SM01118 Asalp_39460 Asalp_39600 SM00387 Histidine kinase-like ATPases Asalp_39600 SM00433 TopoisomeraseII Asalp_39610 SM00434 DNA Topoisomerase IV Asalp_39680 SM00382 ATPases associated with a variety of cellular activities Asalp_39700 SM01130 Asalp_39700 Asalp_39830 SM00344 helix_turn_helix ASNC type Asalp_39840 SM01266 Asalp_39840 Asalp_39850 SM00642 Alpha-amylase domain Asalp_39870 SM00354 helix_turn _helix lactose operon repressor Asalp_39960 SM00354 helix_turn _helix lactose operon repressor Asalp_39980 SM00870 Asalp_39980 Asalp_40010 SM00851 MGS-like domain Asalp_40080 SM00260 Two component signalling adaptor domain Asalp_40080 SM00448 cheY-homologous receiver domain Asalp_40090 SM00873 B3/4 domain Asalp_40120 SM01207 Asalp_40120 Asalp_40130 SM00905 Dihydroneopterin aldolase Asalp_40170 SM00833 Cobalamin synthesis protein cobW C-terminal domain Asalp_40220 SM00822 Asalp_40220 Asalp_40230 SM00052 Putative diguanylate phosphodiesterase Asalp_40260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_40260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_40270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_40290 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Asalp_40290 SM00267 diguanylate cyclase Asalp_40340 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_40340 SM00895 Asalp_40340 Asalp_40350 SM00644 Asalp_40350 Asalp_40470 SM00957 SecA DEAD-like domain Asalp_40470 SM00958 SecA preprotein cross-linking domain Asalp_40500 SM00864 Tubulin/FtsZ family, GTPase domain Asalp_40500 SM00865 Tubulin/FtsZ family, C-terminal domain Asalp_40510 SM00842 Cell division protein FtsA Asalp_40680 SM00749 bacterial OsmY and nodulation domain Asalp_40780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Asalp_40790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Asalp_40940 SM00382 ATPases associated with a variety of cellular activities Asalp_40980 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_40990 SM00382 ATPases associated with a variety of cellular activities Asalp_41120 SM00530 Helix-turn-helix XRE-family like proteins Asalp_41180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_41200 SM00267 diguanylate cyclase Asalp_41220 SM00421 helix_turn_helix, Lux Regulon Asalp_41320 SM00382 ATPases associated with a variety of cellular activities Asalp_41330 SM00357 Cold shock protein domain Asalp_41370 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_41410 SM00357 Cold shock protein domain Asalp_41450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_41450 SM00387 Histidine kinase-like ATPases Asalp_41450 SM00388 His Kinase A (phosphoacceptor) domain Asalp_41460 SM00448 cheY-homologous receiver domain Asalp_41460 SM00862 Transcriptional regulatory protein, C terminal Asalp_41520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_41520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_41540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_41540 SM00091 PAS domain Asalp_41540 SM00267 diguanylate cyclase Asalp_41550 SM00938 Nitrogen regulatory protein P-II Asalp_41670 SM00530 Helix-turn-helix XRE-family like proteins Asalp_41680 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_41680 SM00866 Asalp_41680 Asalp_41730 SM00382 ATPases associated with a variety of cellular activities Asalp_41750 SM00267 diguanylate cyclase Asalp_41780 SM00342 helix_turn_helix, arabinose operon control protein Asalp_41780 SM00871 Bacterial transcription activator, effector binding domain Asalp_41800 SM01060 Asalp_41800 Asalp_41830 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_41850 SM00014 Acid phosphatase homologues Asalp_41890 SM00091 PAS domain Asalp_41920 SM01120 Asalp_41920 Asalp_41980 SM00838 Elongation factor G C-terminus Asalp_41980 SM00889 Elongation factor G, domain IV Asalp_42060 SM00663 RNA polymerase I subunit A N-terminus Asalp_42110 SM00649 Ribosomal protein L11/L12 Asalp_42120 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Asalp_42120 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Asalp_42220 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Asalp_42220 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Asalp_42220 SM00493 Asalp_42220 Asalp_42260 SM00387 Histidine kinase-like ATPases Asalp_42270 SM00448 cheY-homologous receiver domain Asalp_42270 SM00862 Transcriptional regulatory protein, C terminal Asalp_42340 SM00382 ATPases associated with a variety of cellular activities Asalp_42340 SM00448 cheY-homologous receiver domain Asalp_42360 SM00387 Histidine kinase-like ATPases Asalp_42360 SM00388 His Kinase A (phosphoacceptor) domain Asalp_42400 SM00116 Domain in cystathionine beta-synthase and other proteins. Asalp_42420 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_42430 SM00344 helix_turn_helix ASNC type Asalp_42450 SM00849 Metallo-beta-lactamase superfamily Asalp_42460 SM00382 ATPases associated with a variety of cellular activities Asalp_42460 SM01086 C-terminal, D2-small domain, of ClpB protein Asalp_42480 SM00363 S4 RNA-binding domain Asalp_42560 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Asalp_42560 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Asalp_42590 SM00342 helix_turn_helix, arabinose operon control protein Asalp_42610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_42610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_42810 SM00382 ATPases associated with a variety of cellular activities Asalp_42830 SM01038 Beta galactosidase small chain Asalp_42840 SM00354 helix_turn _helix lactose operon repressor Asalp_42940 SM00464 Found in ATP-dependent protease La (LON) Asalp_42950 SM00836 DALR anticodon binding domain Asalp_42950 SM01016 Arginyl tRNA synthetase N terminal dom Asalp_42980 SM00382 ATPases associated with a variety of cellular activities Asalp_42980 SM01086 C-terminal, D2-small domain, of ClpB protein Asalp_43060 SM00924 MgtE intracellular N domain Asalp_43070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Asalp_43070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_43070 SM01358 Asalp_43070 Asalp_43130 SM00341 Helicase and RNase D C-terminal Asalp_43130 SM00487 DEAD-like helicases superfamily Asalp_43130 SM00490 helicase superfamily c-terminal domain Asalp_43130 SM00956 Asalp_43130 Asalp_43190 SM00382 ATPases associated with a variety of cellular activities Asalp_43240 SM01230 Asalp_43240 Asalp_43330 SM00642 Alpha-amylase domain Asalp_43370 SM00448 cheY-homologous receiver domain Asalp_43370 SM00862 Transcriptional regulatory protein, C terminal Asalp_43380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_43380 SM00387 Histidine kinase-like ATPases Asalp_43380 SM00388 His Kinase A (phosphoacceptor) domain Asalp_43400 SM00919 Malic enzyme, NAD binding domain Asalp_43400 SM01274 Asalp_43400 Asalp_43430 SM00487 DEAD-like helicases superfamily Asalp_43430 SM00490 helicase superfamily c-terminal domain Asalp_43540 SM00382 ATPases associated with a variety of cellular activities Asalp_43550 SM00563 Phosphate acyltransferases Asalp_43600 SM00062 Bacterial periplasmic substrate-binding proteins Asalp_43610 SM00382 ATPases associated with a variety of cellular activities Asalp_43680 SM00267 diguanylate cyclase Asalp_43690 SM00422 helix_turn_helix, mercury resistance Asalp_43980 SM00829 Enoylreductase Asalp_44000 SM00052 Putative diguanylate phosphodiesterase Asalp_44000 SM00267 diguanylate cyclase Asalp_44120 SM00448 cheY-homologous receiver domain Asalp_44120 SM00862 Transcriptional regulatory protein, C terminal Asalp_44130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Asalp_44130 SM00387 Histidine kinase-like ATPases Asalp_44130 SM00388 His Kinase A (phosphoacceptor) domain Asalp_44220 SM00836 DALR anticodon binding domain Asalp_44270 SM00052 Putative diguanylate phosphodiesterase Asalp_44310 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Asalp_44380 SM00849 Metallo-beta-lactamase superfamily Asalp_44390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Asalp_44390 SM00382 ATPases associated with a variety of cellular activities Asalp_44400 SM00345 helix_turn_helix gluconate operon transcriptional repressor Asalp_44400 SM00866 Asalp_44400 Asalp_44430 SM00354 helix_turn _helix lactose operon repressor Asalp_44470 SM00382 ATPases associated with a variety of cellular activities Asalp_44480 SM00382 ATPases associated with a variety of cellular activities Asalp_44490 SM00342 helix_turn_helix, arabinose operon control protein Asalp_44510 SM00450 Rhodanese Homology Domain Asalp_44580 SM00357 Cold shock protein domain Asalp_44580 SM00382 ATPases associated with a variety of cellular activities Asalp_44580 SM00959 Rho termination factor, N-terminal domain Asalp_44600 SM00487 DEAD-like helicases superfamily Asalp_44600 SM00490 helicase superfamily c-terminal domain Asalp_44640 SM00052 Putative diguanylate phosphodiesterase Asalp_44640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Asalp_44640 SM00091 PAS domain Asalp_44640 SM00267 diguanylate cyclase Asalp_44660 SM01004 Delta-aminolevulinic acid dehydratase Asalp_44820 SM00421 helix_turn_helix, Lux Regulon Asalp_44840 SM00420 helix_turn_helix, Deoxyribose operon repressor Asalp_44840 SM01134 Asalp_44840 Asalp_44850 SM00448 cheY-homologous receiver domain Asalp_44850 SM00862 Transcriptional regulatory protein, C terminal Asalp_44860 SM00387 Histidine kinase-like ATPases Asalp_44860 SM00388 His Kinase A (phosphoacceptor) domain Asalp_44910 SM00382 ATPases associated with a variety of cellular activities Asalp_44990 SM00470 ParB-like nuclease domain Asalp_45020 SM01228 Asalp_45020 Asalp_45050 SM00382 ATPases associated with a variety of cellular activities Asalp_45060 SM00382 ATPases associated with a variety of cellular activities Asalp_45100 SM00965 Secretin and TonB N terminus short domain Asalp_45120 SM00382 ATPases associated with a variety of cellular activities Asalp_45150 SM00382 ATPases associated with a variety of cellular activities Asalp_45160 SM00382 ATPases associated with a variety of cellular activities Asalp_45260 SM00530 Helix-turn-helix XRE-family like proteins Asalp_45280 SM00857 Resolvase, N terminal domain Asalp_45310 SM00857 Resolvase, N terminal domain Asalp_45400 SM00857 Resolvase, N terminal domain Asalp_45450 SM00347 helix_turn_helix multiple antibiotic resistance protein Asalp_45460 SM00829 Enoylreductase Asalp_45620 SM00829 Enoylreductase Asalp_45670 SM00857 Resolvase, N terminal domain Asalp_45690 SM00822 Asalp_45690 Asalp_45700 SM00487 DEAD-like helicases superfamily Asalp_45850 SM00382 ATPases associated with a variety of cellular activities Asalp_45870 SM00062 Bacterial periplasmic substrate-binding proteins