locus-tag class description C5P03_00005 PF11638 DnaA N-terminal domain C5P03_00005 PF08299 Bacterial dnaA protein helix-turn-helix C5P03_00005 PF00308 Bacterial dnaA protein C5P03_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C5P03_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C5P03_00010 PF02767 DNA polymerase III beta subunit, central domain C5P03_00015 PF02463 RecF/RecN/SMC N terminal domain C5P03_00020 PF00204 DNA gyrase B C5P03_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_00020 PF01751 Toprim domain C5P03_00020 PF00986 DNA gyrase B subunit, carboxyl terminus C5P03_00020 PF18053 DNA gyrase B subunit insert domain C5P03_00035 PF08279 HTH domain C5P03_00035 PF13280 WYL domain C5P03_00040 PF00011 Hsp20/alpha crystallin family C5P03_00045 PF00011 Hsp20/alpha crystallin family C5P03_00060 PF00155 Aminotransferase class I and II C5P03_00085 PF00486 Transcriptional regulatory protein, C terminal C5P03_00085 PF00072 Response regulator receiver domain C5P03_00090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_00090 PF13492 GAF domain C5P03_00090 PF13493 Domain of unknown function (DUF4118) C5P03_00090 PF02702 Osmosensitive K+ channel His kinase sensor domain C5P03_00090 PF00512 His Kinase A (phospho-acceptor) domain C5P03_00095 PF02669 K+-transporting ATPase, c chain C5P03_00105 PF03814 Potassium-transporting ATPase A subunit C5P03_00115 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_00115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C5P03_00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_00120 PF00512 His Kinase A (phospho-acceptor) domain C5P03_00120 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_00125 PF00873 AcrB/AcrD/AcrF family C5P03_00130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_00135 PF00440 Bacterial regulatory proteins, tetR family C5P03_00170 PF12146 Serine aminopeptidase, S33 C5P03_00175 PF12105 SpoU, rRNA methylase, C-terminal C5P03_00175 PF00588 SpoU rRNA Methylase family C5P03_00180 PF13291 ACT domain C5P03_00180 PF04607 Region found in RelA / SpoT proteins C5P03_00180 PF02824 TGS domain C5P03_00185 PF01192 RNA polymerase Rpb6 C5P03_00190 PF00625 Guanylate kinase C5P03_00200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C5P03_00215 PF00892 EamA-like transporter family C5P03_00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_00235 PF03466 LysR substrate binding domain C5P03_00240 PF00579 tRNA synthetases class I (W and Y) C5P03_00245 PF00582 Universal stress protein family C5P03_00250 PF07055 Enoyl reductase FAD binding domain C5P03_00250 PF12241 Trans-2-enoyl-CoA reductase catalytic region C5P03_00250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C5P03_00260 PF00210 Ferritin-like domain C5P03_00270 PF01810 LysE type translocator C5P03_00300 PF00665 Integrase core domain C5P03_00305 PF01695 IstB-like ATP binding protein C5P03_00315 PF16449 Fimbrillin MatB C5P03_00320 PF00072 Response regulator receiver domain C5P03_00320 PF00196 Bacterial regulatory proteins, luxR family C5P03_00325 PF00989 PAS fold C5P03_00325 PF01627 Hpt domain C5P03_00325 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_00325 PF00512 His Kinase A (phospho-acceptor) domain C5P03_00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_00325 PF00072 Response regulator receiver domain C5P03_00335 PF00989 PAS fold C5P03_00335 PF01627 Hpt domain C5P03_00335 PF00072 Response regulator receiver domain C5P03_00335 PF00512 His Kinase A (phospho-acceptor) domain C5P03_00335 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_00335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_00345 PF06580 Histidine kinase C5P03_00345 PF07694 5TMR of 5TMR-LYT C5P03_00345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_00350 PF04397 LytTr DNA-binding domain C5P03_00350 PF00072 Response regulator receiver domain C5P03_00355 PF07690 Major Facilitator Superfamily C5P03_00360 PF02222 ATP-grasp domain C5P03_00360 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C5P03_00365 PF00731 AIR carboxylase C5P03_00380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_00380 PF03466 LysR substrate binding domain C5P03_00385 PF00593 TonB dependent receptor C5P03_00385 PF07715 TonB-dependent Receptor Plug Domain C5P03_00390 PF01177 Asp/Glu/Hydantoin racemase C5P03_00425 PF00899 ThiF family C5P03_00430 PF02657 Fe-S metabolism associated domain C5P03_00435 PF00266 Aminotransferase class-V C5P03_00440 PF13361 UvrD-like helicase C-terminal domain C5P03_00440 PF00580 UvrD/REP helicase N-terminal domain C5P03_00455 PF08240 Alcohol dehydrogenase GroES-like domain C5P03_00455 PF00107 Zinc-binding dehydrogenase C5P03_00460 PF00155 Aminotransferase class I and II C5P03_00465 PF00440 Bacterial regulatory proteins, tetR family C5P03_00465 PF08360 QacR-like protein, C-terminal region C5P03_00470 PF01370 NAD dependent epimerase/dehydratase family C5P03_00475 PF00534 Glycosyl transferases group 1 C5P03_00475 PF13439 Glycosyltransferase Family 4 C5P03_00490 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C5P03_00505 PF03755 YicC-like family, N-terminal region C5P03_00505 PF08340 Domain of unknown function (DUF1732) C5P03_00510 PF01138 3' exoribonuclease family, domain 1 C5P03_00510 PF03725 3' exoribonuclease family, domain 2 C5P03_00515 PF00156 Phosphoribosyl transferase domain C5P03_00520 PF00403 Heavy-metal-associated domain C5P03_00525 PF13411 MerR HTH family regulatory protein C5P03_00530 PF00563 EAL domain C5P03_00530 PF01590 GAF domain C5P03_00530 PF00990 Diguanylate cyclase, GGDEF domain C5P03_00530 PF00360 Phytochrome region C5P03_00535 PF06288 Protein of unknown function (DUF1040) C5P03_00540 PF12801 4Fe-4S binding domain C5P03_00540 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C5P03_00540 PF13746 4Fe-4S dicluster domain C5P03_00545 PF01636 Phosphotransferase enzyme family C5P03_00550 PF01323 DSBA-like thioredoxin domain C5P03_00555 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_00560 PF00005 ABC transporter C5P03_00570 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C5P03_00570 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C5P03_00575 PF00857 Isochorismatase family C5P03_00585 PF04463 Protein of unknown function (DUF523) C5P03_00590 PF01553 Acyltransferase C5P03_00605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C5P03_00605 PF00205 Thiamine pyrophosphate enzyme, central domain C5P03_00605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C5P03_00615 PF01063 Amino-transferase class IV C5P03_00620 PF00920 Dehydratase family C5P03_00625 PF00585 C-terminal regulatory domain of Threonine dehydratase C5P03_00625 PF00291 Pyridoxal-phosphate dependent enzyme C5P03_00630 PF00691 OmpA family C5P03_00630 PF01389 OmpA-like transmembrane domain C5P03_00640 PF00440 Bacterial regulatory proteins, tetR family C5P03_00650 PF00271 Helicase conserved C-terminal domain C5P03_00650 PF18074 Primosomal protein N C-terminal domain C5P03_00650 PF00270 DEAD/DEAH box helicase C5P03_00650 PF17764 3′ DNA-binding domain (3′BD) C5P03_00650 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C5P03_00655 PF01197 Ribosomal protein L31 C5P03_00660 PF11066 Protein of unknown function (DUF2867) C5P03_00660 PF13460 NAD(P)H-binding C5P03_00665 PF00390 Malic enzyme, N-terminal domain C5P03_00665 PF03949 Malic enzyme, NAD binding domain C5P03_00675 PF00672 HAMP domain C5P03_00675 PF00512 His Kinase A (phospho-acceptor) domain C5P03_00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_00680 PF00072 Response regulator receiver domain C5P03_00680 PF00486 Transcriptional regulatory protein, C terminal C5P03_00685 PF05958 tRNA (Uracil-5-)-methyltransferase C5P03_00725 PF03102 NeuB family C5P03_00725 PF08666 SAF domain C5P03_00735 PF02348 Cytidylyltransferase C5P03_00755 PF13193 AMP-binding enzyme C-terminal domain C5P03_00755 PF00501 AMP-binding enzyme C5P03_00775 PF01501 Glycosyl transferase family 8 C5P03_00775 PF08437 Glycosyl transferase family 8 C-terminal C5P03_00795 PF02719 Polysaccharide biosynthesis protein C5P03_00800 PF02903 Alpha amylase, N-terminal ig-like domain C5P03_00800 PF00128 Alpha amylase, catalytic domain C5P03_00815 PF00012 Hsp70 protein C5P03_00820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C5P03_00820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5P03_00825 PF05981 CreA protein C5P03_00835 PF01258 Prokaryotic dksA/traR C4-type zinc finger C5P03_00840 PF00120 Glutamine synthetase, catalytic domain C5P03_00845 PF00202 Aminotransferase class-III C5P03_00850 PF13416 Bacterial extracellular solute-binding protein C5P03_00855 PF13416 Bacterial extracellular solute-binding protein C5P03_00860 PF00005 ABC transporter C5P03_00860 PF08402 TOBE domain C5P03_00865 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_00870 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_00875 PF03475 3-alpha domain C5P03_00875 PF03473 MOSC domain C5P03_00895 PF03061 Thioesterase superfamily C5P03_00900 PF16124 RecQ zinc-binding C5P03_00900 PF00570 HRDC domain C5P03_00900 PF00270 DEAD/DEAH box helicase C5P03_00900 PF00271 Helicase conserved C-terminal domain C5P03_00900 PF09382 RQC domain C5P03_00905 PF00034 Cytochrome c C5P03_00910 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C5P03_00920 PF02592 Putative vitamin uptake transporter C5P03_00925 PF03737 Aldolase/RraA C5P03_00935 PF03448 MgtE intracellular N domain C5P03_00935 PF00571 CBS domain C5P03_00935 PF01769 Divalent cation transporter C5P03_00940 PF14824 Sirohaem biosynthesis protein central C5P03_00940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C5P03_00940 PF10414 Sirohaem synthase dimerisation region C5P03_00945 PF01226 Formate/nitrite transporter C5P03_00950 PF13806 Rieske-like [2Fe-2S] domain C5P03_00955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C5P03_00955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C5P03_00955 PF18267 Rubredoxin NAD+ reductase C-terminal domain C5P03_00955 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_00955 PF04324 BFD-like [2Fe-2S] binding domain C5P03_00960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_00960 PF03466 LysR substrate binding domain C5P03_00965 PF07690 Major Facilitator Superfamily C5P03_00970 PF10431 C-terminal, D2-small domain, of ClpB protein C5P03_00970 PF00004 ATPase family associated with various cellular activities (AAA) C5P03_00970 PF07724 AAA domain (Cdc48 subfamily) C5P03_00975 PF00227 Proteasome subunit C5P03_00985 PF03485 Arginyl tRNA synthetase N terminal domain C5P03_00985 PF05746 DALR anticodon binding domain C5P03_00985 PF00750 tRNA synthetases class I (R) C5P03_00995 PF04542 Sigma-70 region 2 C5P03_00995 PF04545 Sigma-70, region 4 C5P03_01005 PF02673 Bacitracin resistance protein BacA C5P03_01010 PF00248 Aldo/keto reductase family C5P03_01015 PF01263 Aldose 1-epimerase C5P03_01020 PF00288 GHMP kinases N terminal domain C5P03_01020 PF08544 GHMP kinases C terminal C5P03_01020 PF10509 Galactokinase galactose-binding signature C5P03_01025 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C5P03_01025 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C5P03_01030 PF16363 GDP-mannose 4,6 dehydratase C5P03_01035 PF00356 Bacterial regulatory proteins, lacI family C5P03_01045 PF13407 Periplasmic binding protein domain C5P03_01050 PF00005 ABC transporter C5P03_01060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_01060 PF02743 Cache domain C5P03_01060 PF00672 HAMP domain C5P03_01085 PF00696 Amino acid kinase family C5P03_01090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C5P03_01090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C5P03_01095 PF03606 C4-dicarboxylate anaerobic carrier C5P03_01100 PF01316 Arginine repressor, DNA binding domain C5P03_01100 PF02863 Arginine repressor, C-terminal domain C5P03_01105 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C5P03_01105 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C5P03_01110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C5P03_01110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C5P03_01125 PF02666 Phosphatidylserine decarboxylase C5P03_01130 PF02743 Cache domain C5P03_01130 PF00672 HAMP domain C5P03_01130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_01135 PF08212 Lipocalin-like domain C5P03_01145 PF00465 Iron-containing alcohol dehydrogenase C5P03_01150 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C5P03_01150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C5P03_01150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C5P03_01155 PF02233 NAD(P) transhydrogenase beta subunit C5P03_01165 PF13309 HTH domain C5P03_01165 PF08348 YheO-like PAS domain C5P03_01170 PF03313 Serine dehydratase alpha chain C5P03_01175 PF00375 Sodium:dicarboxylate symporter family C5P03_01180 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_01180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C5P03_01185 PF13525 Outer membrane lipoprotein C5P03_01190 PF00849 RNA pseudouridylate synthase C5P03_01190 PF01479 S4 domain C5P03_01200 PF17871 AAA lid domain C5P03_01200 PF10431 C-terminal, D2-small domain, of ClpB protein C5P03_01200 PF02861 Clp amino terminal domain, pathogenicity island component C5P03_01200 PF07724 AAA domain (Cdc48 subfamily) C5P03_01200 PF00004 ATPase family associated with various cellular activities (AAA) C5P03_01205 PF03590 Aspartate-ammonia ligase C5P03_01210 PF01037 Lrp/AsnC ligand binding domain C5P03_01225 PF00571 CBS domain C5P03_01225 PF00478 IMP dehydrogenase / GMP reductase domain C5P03_01245 PF00512 His Kinase A (phospho-acceptor) domain C5P03_01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_01255 PF00158 Sigma-54 interaction domain C5P03_01255 PF00072 Response regulator receiver domain C5P03_01260 PF06496 Protein of unknown function (DUF1097) C5P03_01270 PF00174 Oxidoreductase molybdopterin binding domain C5P03_01275 PF01794 Ferric reductase like transmembrane component C5P03_01290 PF00486 Transcriptional regulatory protein, C terminal C5P03_01290 PF00072 Response regulator receiver domain C5P03_01295 PF08918 PhoQ Sensor C5P03_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_01305 PF01568 Molydopterin dinucleotide binding domain C5P03_01305 PF00384 Molybdopterin oxidoreductase C5P03_01305 PF18364 Molybdopterin oxidoreductase N-terminal domain C5P03_01310 PF03264 NapC/NirT cytochrome c family, N-terminal region C5P03_01315 PF01751 Toprim domain C5P03_01315 PF01131 DNA topoisomerase C5P03_01320 PF02386 Cation transport protein C5P03_01325 PF02254 TrkA-N domain C5P03_01325 PF02080 TrkA-C domain C5P03_01330 PF01565 FAD binding domain C5P03_01330 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C5P03_01335 PF08279 HTH domain C5P03_01335 PF03099 Biotin/lipoate A/B protein ligase family C5P03_01335 PF02237 Biotin protein ligase C terminal domain C5P03_01340 PF00485 Phosphoribulokinase / Uridine kinase family C5P03_01355 PF03143 Elongation factor Tu C-terminal domain C5P03_01355 PF03144 Elongation factor Tu domain 2 C5P03_01355 PF00009 Elongation factor Tu GTP binding domain C5P03_01365 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C5P03_01370 PF02357 Transcription termination factor nusG C5P03_01370 PF00467 KOW motif C5P03_01375 PF03946 Ribosomal protein L11, N-terminal domain C5P03_01375 PF00298 Ribosomal protein L11, RNA binding domain C5P03_01380 PF00687 Ribosomal protein L1p/L10e family C5P03_01385 PF00466 Ribosomal protein L10 C5P03_01390 PF16320 Ribosomal protein L7/L12 dimerisation domain C5P03_01390 PF00542 Ribosomal protein L7/L12 C-terminal domain C5P03_01395 PF04565 RNA polymerase Rpb2, domain 3 C5P03_01395 PF10385 RNA polymerase beta subunit external 1 domain C5P03_01395 PF04563 RNA polymerase beta subunit C5P03_01395 PF04561 RNA polymerase Rpb2, domain 2 C5P03_01395 PF04560 RNA polymerase Rpb2, domain 7 C5P03_01395 PF00562 RNA polymerase Rpb2, domain 6 C5P03_01400 PF05000 RNA polymerase Rpb1, domain 4 C5P03_01400 PF04998 RNA polymerase Rpb1, domain 5 C5P03_01400 PF04983 RNA polymerase Rpb1, domain 3 C5P03_01400 PF00623 RNA polymerase Rpb1, domain 2 C5P03_01400 PF04997 RNA polymerase Rpb1, domain 1 C5P03_01405 PF13309 HTH domain C5P03_01405 PF08348 YheO-like PAS domain C5P03_01410 PF01042 Endoribonuclease L-PSP C5P03_01415 PF02635 DsrE/DsrF-like family C5P03_01420 PF02635 DsrE/DsrF-like family C5P03_01425 PF04077 DsrH like protein C5P03_01430 PF00164 Ribosomal protein S12/S23 C5P03_01435 PF00177 Ribosomal protein S7p/S5e C5P03_01440 PF00009 Elongation factor Tu GTP binding domain C5P03_01440 PF03144 Elongation factor Tu domain 2 C5P03_01440 PF14492 Elongation Factor G, domain II C5P03_01440 PF03764 Elongation factor G, domain IV C5P03_01440 PF00679 Elongation factor G C-terminus C5P03_01445 PF00009 Elongation factor Tu GTP binding domain C5P03_01445 PF03143 Elongation factor Tu C-terminal domain C5P03_01445 PF03144 Elongation factor Tu domain 2 C5P03_01475 PF04363 Protein of unknown function (DUF496) C5P03_01485 PF04751 Protein of unknown function (DUF615) C5P03_01490 PF01523 Putative modulator of DNA gyrase C5P03_01495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C5P03_01500 PF01722 BolA-like protein C5P03_01510 PF05494 MlaC protein C5P03_01515 PF02470 MlaD protein C5P03_01520 PF02405 Permease MlaE C5P03_01525 PF00005 ABC transporter C5P03_01530 PF00571 CBS domain C5P03_01530 PF01380 SIS domain C5P03_01540 PF06835 Lipopolysaccharide-assembly, LptC-related C5P03_01545 PF03968 OstA-like protein C5P03_01550 PF00005 ABC transporter C5P03_01550 PF12399 Branched-chain amino acid ATP-binding cassette transporter C5P03_01555 PF00309 Sigma-54 factor, Activator interacting domain (AID) C5P03_01555 PF04963 Sigma-54 factor, core binding domain C5P03_01555 PF04552 Sigma-54, DNA binding domain C5P03_01560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C5P03_01565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C5P03_01570 PF03668 P-loop ATPase protein family C5P03_01575 PF00381 PTS HPr component phosphorylation site C5P03_01585 PF07071 KDGP aldolase C5P03_01590 PF03841 L-seryl-tRNA selenium transferase C5P03_01595 PF01979 Amidohydrolase family C5P03_01630 PF13180 PDZ domain C5P03_01635 PF13180 PDZ domain C5P03_01635 PF00595 PDZ domain C5P03_01645 PF03969 AFG1-like ATPase C5P03_01650 PF00572 Ribosomal protein L13 C5P03_01655 PF00380 Ribosomal protein S9/S16 C5P03_01660 PF00355 Rieske [2Fe-2S] domain C5P03_01660 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C5P03_01665 PF00033 Cytochrome b/b6/petB C5P03_01665 PF00032 Cytochrome b(C-terminal)/b6/petD C5P03_01670 PF02167 Cytochrome C1 family C5P03_01675 PF02798 Glutathione S-transferase, N-terminal domain C5P03_01675 PF00043 Glutathione S-transferase, C-terminal domain C5P03_01680 PF04386 Stringent starvation protein B C5P03_01685 PF04972 BON domain C5P03_01690 PF13580 SIS domain C5P03_01700 PF04348 LppC putative lipoprotein C5P03_01705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C5P03_01720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C5P03_01725 PF00813 FliP family C5P03_01730 PF01313 Bacterial export proteins, family 3 C5P03_01735 PF01311 Bacterial export proteins, family 1 C5P03_01740 PF01312 FlhB HrpN YscU SpaS Family C5P03_01745 PF00771 FHIPEP family C5P03_01750 PF00158 Sigma-54 interaction domain C5P03_01750 PF02954 Bacterial regulatory protein, Fis family C5P03_01750 PF00072 Response regulator receiver domain C5P03_01755 PF02049 Flagellar hook-basal body complex protein FliE C5P03_01760 PF01514 Secretory protein of YscJ/FliF family C5P03_01760 PF08345 Flagellar M-ring protein C-terminal C5P03_01765 PF14841 FliG middle domain C5P03_01765 PF14842 FliG N-terminal domain C5P03_01765 PF01706 FliG C-terminal domain C5P03_01775 PF18269 T3SS EscN ATPase C-terminal domain C5P03_01775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5P03_01790 PF04316 Anti-sigma-28 factor, FlgM C5P03_01800 PF00460 Flagella basal body rod protein C5P03_01805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_01805 PF00460 Flagella basal body rod protein C5P03_01815 PF07559 Flagellar basal body protein FlaE C5P03_01815 PF00460 Flagella basal body rod protein C5P03_01815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_01820 PF00460 Flagella basal body rod protein C5P03_01820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_01825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_01825 PF00460 Flagella basal body rod protein C5P03_01830 PF02107 Flagellar L-ring protein C5P03_01835 PF02119 Flagellar P-ring protein C5P03_01845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_01845 PF00460 Flagella basal body rod protein C5P03_01865 PF00700 Bacterial flagellin C-terminal helical region C5P03_01865 PF00669 Bacterial flagellin N-terminal helical region C5P03_01880 PF07195 Flagellar hook-associated protein 2 C-terminus C5P03_01880 PF07196 Flagellin hook IN motif C5P03_01880 PF02465 Flagellar hook-associated protein 2 N-terminus C5P03_01885 PF02561 Flagellar protein FliS C5P03_01905 PF04545 Sigma-70, region 4 C5P03_01905 PF04542 Sigma-70 region 2 C5P03_01910 PF01618 MotA/TolQ/ExbB proton channel family C5P03_01915 PF00691 OmpA family C5P03_01915 PF13677 Membrane MotB of proton-channel complex MotA/MotB C5P03_01925 PF01476 LysM domain C5P03_01925 PF01464 Transglycosylase SLT domain C5P03_01935 PF02381 MraZ protein, putative antitoxin-like C5P03_01940 PF01795 MraW methylase family C5P03_01945 PF04999 Cell division protein FtsL C5P03_01950 PF00905 Penicillin binding protein transpeptidase domain C5P03_01950 PF03717 Penicillin-binding Protein dimerisation domain C5P03_01955 PF08245 Mur ligase middle domain C5P03_01955 PF02875 Mur ligase family, glutamate ligase domain C5P03_01955 PF01225 Mur ligase family, catalytic domain C5P03_01960 PF08245 Mur ligase middle domain C5P03_01960 PF02875 Mur ligase family, glutamate ligase domain C5P03_01960 PF01225 Mur ligase family, catalytic domain C5P03_01965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C5P03_01965 PF00953 Glycosyl transferase family 4 C5P03_01970 PF02875 Mur ligase family, glutamate ligase domain C5P03_01970 PF08245 Mur ligase middle domain C5P03_01975 PF01098 Cell cycle protein C5P03_01980 PF03033 Glycosyltransferase family 28 N-terminal domain C5P03_01980 PF04101 Glycosyltransferase family 28 C-terminal domain C5P03_01985 PF01225 Mur ligase family, catalytic domain C5P03_01985 PF02875 Mur ligase family, glutamate ligase domain C5P03_01985 PF08245 Mur ligase middle domain C5P03_01990 PF03799 Cell division protein FtsQ C5P03_01990 PF08478 POTRA domain, FtsQ-type C5P03_01995 PF02491 SHS2 domain inserted in FTSA C5P03_02000 PF12327 FtsZ family, C-terminal domain C5P03_02000 PF00091 Tubulin/FtsZ family, GTPase domain C5P03_02005 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C5P03_02015 PF07517 SecA DEAD-like domain C5P03_02015 PF02810 SEC-C motif C5P03_02015 PF01043 SecA preprotein cross-linking domain C5P03_02015 PF07516 SecA Wing and Scaffold domain C5P03_02025 PF00293 NUDIX domain C5P03_02030 PF03884 DNA gyrase inhibitor YacG C5P03_02035 PF07072 Cell division protein C5P03_02040 PF01121 Dephospho-CoA kinase C5P03_02045 PF01478 Type IV leader peptidase family C5P03_02045 PF06750 Bacterial Peptidase A24 N-terminal domain C5P03_02055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C5P03_02055 PF00437 Type II/IV secretion system protein C5P03_02060 PF07963 Prokaryotic N-terminal methylation motif C5P03_02065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C5P03_02065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C5P03_02075 PF01510 N-acetylmuramoyl-L-alanine amidase C5P03_02080 PF07729 FCD domain C5P03_02080 PF00392 Bacterial regulatory proteins, gntR family C5P03_02085 PF00456 Transketolase, thiamine diphosphate binding domain C5P03_02085 PF17831 Pyruvate dehydrogenase E1 component middle domain C5P03_02090 PF00364 Biotin-requiring enzyme C5P03_02090 PF02817 e3 binding domain C5P03_02090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C5P03_02095 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_02095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C5P03_02100 PF13426 PAS domain C5P03_02100 PF00563 EAL domain C5P03_02100 PF00990 Diguanylate cyclase, GGDEF domain C5P03_02100 PF08448 PAS fold C5P03_02100 PF05231 MASE1 C5P03_02100 PF08447 PAS fold C5P03_02110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_02110 PF00672 HAMP domain C5P03_02110 PF12729 Four helix bundle sensory module for signal transduction C5P03_02125 PF11791 Aconitate B N-terminal domain C5P03_02125 PF06434 Aconitate hydratase 2 N-terminus C5P03_02125 PF00330 Aconitase family (aconitate hydratase) C5P03_02130 PF00563 EAL domain C5P03_02130 PF12792 CSS motif domain associated with EAL C5P03_02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_02140 PF03466 LysR substrate binding domain C5P03_02145 PF03466 LysR substrate binding domain C5P03_02145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_02150 PF01810 LysE type translocator C5P03_02160 PF07683 Cobalamin synthesis protein cobW C-terminal domain C5P03_02160 PF02492 CobW/HypB/UreG, nucleotide-binding domain C5P03_02165 PF07690 Major Facilitator Superfamily C5P03_02175 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C5P03_02180 PF02152 Dihydroneopterin aldolase C5P03_02185 PF02660 Glycerol-3-phosphate acyltransferase C5P03_02305 PF01584 CheW-like domain C5P03_02305 PF00072 Response regulator receiver domain C5P03_02310 PF00106 short chain dehydrogenase C5P03_02315 PF13718 GNAT acetyltransferase 2 C5P03_02315 PF08351 Domain of unknown function (DUF1726) C5P03_02315 PF05127 Helicase C5P03_02315 PF17176 tRNA-binding domain C5P03_02330 PF00210 Ferritin-like domain C5P03_02340 PF02142 MGS-like domain C5P03_02355 PF17763 Glutaminase/Asparaginase C-terminal domain C5P03_02355 PF00710 Asparaginase, N-terminal C5P03_02365 PF00356 Bacterial regulatory proteins, lacI family C5P03_02375 PF00480 ROK family C5P03_02380 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C5P03_02385 PF00232 Glycosyl hydrolase family 1 C5P03_02390 PF02378 Phosphotransferase system, EIIC C5P03_02395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C5P03_02400 PF02378 Phosphotransferase system, EIIC C5P03_02410 PF00356 Bacterial regulatory proteins, lacI family C5P03_02420 PF00128 Alpha amylase, catalytic domain C5P03_02420 PF11941 Domain of unknown function (DUF3459) C5P03_02425 PF12464 Maltose acetyltransferase C5P03_02425 PF14602 Hexapeptide repeat of succinyl-transferase C5P03_02435 PF03553 Na+/H+ antiporter family C5P03_02475 PF00534 Glycosyl transferases group 1 C5P03_02475 PF08323 Starch synthase catalytic domain C5P03_02480 PF00483 Nucleotidyl transferase C5P03_02485 PF08468 Methyltransferase small domain N-terminal C5P03_02485 PF05175 Methyltransferase small domain C5P03_02490 PF00701 Dihydrodipicolinate synthetase family C5P03_02505 PF13419 Haloacid dehalogenase-like hydrolase C5P03_02510 PF17209 Hfq protein C5P03_02515 PF04403 Paraquat-inducible protein A C5P03_02520 PF02470 MlaD protein C5P03_02525 PF03886 ABC-type transport auxiliary lipoprotein component C5P03_02530 PF00691 OmpA family C5P03_02530 PF01389 OmpA-like transmembrane domain C5P03_02540 PF00657 GDSL-like Lipase/Acylhydrolase C5P03_02545 PF04076 Bacterial OB fold (BOF) protein C5P03_02550 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C5P03_02550 PF01464 Transglycosylase SLT domain C5P03_02555 PF04362 Bacterial Fe(2+) trafficking C5P03_02560 PF00730 HhH-GPD superfamily base excision DNA repair protein C5P03_02560 PF00633 Helix-hairpin-helix motif C5P03_02560 PF10576 Iron-sulfur binding domain of endonuclease III C5P03_02560 PF14815 NUDIX domain C5P03_02565 PF16537 Type II secretion system protein B C5P03_02570 PF13401 AAA domain C5P03_02570 PF01471 Putative peptidoglycan binding domain C5P03_02575 PF12627 Probable RNA and SrmB- binding site of polymerase A C5P03_02575 PF01966 HD domain C5P03_02575 PF01743 Poly A polymerase head domain C5P03_02580 PF01384 Phosphate transporter family C5P03_02585 PF01865 Protein of unknown function DUF47 C5P03_02600 PF03279 Bacterial lipid A biosynthesis acyltransferase C5P03_02605 PF00294 pfkB family carbohydrate kinase C5P03_02605 PF01467 Cytidylyltransferase-like C5P03_02610 PF02321 Outer membrane efflux protein C5P03_02620 PF00293 NUDIX domain C5P03_02630 PF06853 Protein of unknown function (DUF1249) C5P03_02635 PF00149 Calcineurin-like phosphoesterase C5P03_02640 PF05728 Uncharacterised protein family (UPF0227) C5P03_02645 PF00293 NUDIX domain C5P03_02655 PF00204 DNA gyrase B C5P03_02655 PF00986 DNA gyrase B subunit, carboxyl terminus C5P03_02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_02655 PF01751 Toprim domain C5P03_02660 PF00521 DNA gyrase/topoisomerase IV, subunit A C5P03_02660 PF03989 DNA gyrase C-terminal domain, beta-propeller C5P03_02690 PF00684 DnaJ central domain C5P03_02690 PF01556 DnaJ C terminal domain C5P03_02690 PF00226 DnaJ domain C5P03_02695 PF07681 DoxX C5P03_02700 PF00085 Thioredoxin C5P03_02720 PF01553 Acyltransferase C5P03_02725 PF04012 PspA/IM30 family C5P03_02740 PF01541 GIY-YIG catalytic domain C5P03_02750 PF00892 EamA-like transporter family C5P03_02755 PF03167 Uracil DNA glycosylase superfamily C5P03_02765 PF03466 LysR substrate binding domain C5P03_02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_02770 PF00950 ABC 3 transport family C5P03_02775 PF00005 ABC transporter C5P03_02780 PF01297 Zinc-uptake complex component A periplasmic C5P03_02800 PF01551 Peptidase family M23 C5P03_02800 PF08525 Opacity-associated protein A N-terminal motif C5P03_02800 PF01476 LysM domain C5P03_02805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5P03_02810 PF04222 Protein of unknown function (DUF416) C5P03_02825 PF02028 BCCT, betaine/carnitine/choline family transporter C5P03_02830 PF05190 MutS family domain IV C5P03_02830 PF01624 MutS domain I C5P03_02830 PF05188 MutS domain II C5P03_02830 PF00488 MutS domain V C5P03_02830 PF05192 MutS domain III C5P03_02840 PF06953 Arsenical resistance operon trans-acting repressor ArsD C5P03_02845 PF02374 Anion-transporting ATPase C5P03_02850 PF01758 Sodium Bile acid symporter family C5P03_02855 PF03960 ArsC family C5P03_02875 PF00311 Phosphoenolpyruvate carboxylase C5P03_02880 PF01546 Peptidase family M20/M25/M40 C5P03_02880 PF07687 Peptidase dimerisation domain C5P03_02885 PF01118 Semialdehyde dehydrogenase, NAD binding domain C5P03_02885 PF02774 Semialdehyde dehydrogenase, dimerisation domain C5P03_02890 PF00696 Amino acid kinase family C5P03_02895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C5P03_02895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C5P03_02900 PF00764 Arginosuccinate synthase C5P03_02905 PF14698 Argininosuccinate lyase C-terminal C5P03_02905 PF00206 Lyase C5P03_02910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_02910 PF03466 LysR substrate binding domain C5P03_02920 PF14552 Tautomerase enzyme C5P03_02950 PF14602 Hexapeptide repeat of succinyl-transferase C5P03_02950 PF12464 Maltose acetyltransferase C5P03_02955 PF13194 Domain of unknown function (DUF4010) C5P03_02970 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_02975 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_02980 PF00005 ABC transporter C5P03_02980 PF12857 TOBE-like domain C5P03_02985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_02985 PF03466 LysR substrate binding domain C5P03_02990 PF00291 Pyridoxal-phosphate dependent enzyme C5P03_02995 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_03000 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_03005 PF00005 ABC transporter C5P03_03010 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_03015 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C5P03_03015 PF18416 N-acetylglucosamine binding protein domain 2 C5P03_03020 PF00672 HAMP domain C5P03_03020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_03020 PF17200 Single Cache domain 2 C5P03_03060 PF00535 Glycosyl transferase family 2 C5P03_03100 PF11230 Protein of unknown function (DUF3029) C5P03_03105 PF04055 Radical SAM superfamily C5P03_03115 PF03466 LysR substrate binding domain C5P03_03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_03120 PF00155 Aminotransferase class I and II C5P03_03125 PF02583 Metal-sensitive transcriptional repressor C5P03_03140 PF03714 Bacterial pullanase-associated domain C5P03_03140 PF18494 Pullulanase Ins domain C5P03_03140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C5P03_03140 PF17967 Pullulanase N2 domain C5P03_03140 PF11852 Domain of unknown function (DUF3372) C5P03_03145 PF00403 Heavy-metal-associated domain C5P03_03150 PF08534 Redoxin C5P03_03160 PF00271 Helicase conserved C-terminal domain C5P03_03160 PF00270 DEAD/DEAH box helicase C5P03_03175 PF03372 Endonuclease/Exonuclease/phosphatase family C5P03_03180 PF08447 PAS fold C5P03_03180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_03195 PF06062 Uncharacterised protein family (UPF0231) C5P03_03200 PF17853 GGDEF-like domain C5P03_03200 PF05651 Putative sugar diacid recognition C5P03_03200 PF13556 PucR C-terminal helix-turn-helix domain C5P03_03205 PF02447 GntP family permease C5P03_03205 PF02447 GntP family permease C5P03_03210 PF02595 Glycerate kinase family C5P03_03220 PF00255 Glutathione peroxidase C5P03_03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_03225 PF03466 LysR substrate binding domain C5P03_03230 PF01773 Na+ dependent nucleoside transporter N-terminus C5P03_03230 PF07662 Na+ dependent nucleoside transporter C-terminus C5P03_03230 PF07670 Nucleoside recognition C5P03_03235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C5P03_03235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C5P03_03240 PF00472 RF-1 domain C5P03_03245 PF00543 Nitrogen regulatory protein P-II C5P03_03250 PF13416 Bacterial extracellular solute-binding protein C5P03_03260 PF00005 ABC transporter C5P03_03260 PF08402 TOBE domain C5P03_03265 PF04261 Dyp-type peroxidase family C5P03_03270 PF02863 Arginine repressor, C-terminal domain C5P03_03270 PF01316 Arginine repressor, DNA binding domain C5P03_03275 PF00005 ABC transporter C5P03_03280 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_03285 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_03290 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_03295 PF00056 lactate/malate dehydrogenase, NAD binding domain C5P03_03295 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C5P03_03300 PF08238 Sel1 repeat C5P03_03305 PF00970 Oxidoreductase FAD-binding domain C5P03_03305 PF00042 Globin C5P03_03305 PF00175 Oxidoreductase NAD-binding domain C5P03_03310 PF02082 Transcriptional regulator C5P03_03315 PF03471 Transporter associated domain C5P03_03315 PF01595 Cyclin M transmembrane N-terminal domain C5P03_03315 PF00571 CBS domain C5P03_03320 PF01578 Cytochrome C assembly protein C5P03_03325 PF02881 SRP54-type protein, helical bundle domain C5P03_03325 PF00448 SRP54-type protein, GTPase domain C5P03_03325 PF02978 Signal peptide binding domain C5P03_03330 PF00886 Ribosomal protein S16 C5P03_03335 PF05239 PRC-barrel domain C5P03_03335 PF01782 RimM N-terminal domain C5P03_03340 PF01746 tRNA (Guanine-1)-methyltransferase C5P03_03345 PF01245 Ribosomal protein L19 C5P03_03355 PF02976 DNA mismatch repair enzyme MutH C5P03_03360 PF00293 NUDIX domain C5P03_03365 PF02896 PEP-utilising enzyme, TIM barrel domain C5P03_03365 PF05524 PEP-utilising enzyme, N-terminal C5P03_03365 PF01590 GAF domain C5P03_03365 PF00391 PEP-utilising enzyme, mobile domain C5P03_03370 PF01790 Prolipoprotein diacylglyceryl transferase C5P03_03375 PF00303 Thymidylate synthase C5P03_03380 PF06965 Na+/H+ antiporter 1 C5P03_03390 PF03466 LysR substrate binding domain C5P03_03390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_03395 PF01022 Bacterial regulatory protein, arsR family C5P03_03400 PF01649 Ribosomal protein S20 C5P03_03405 PF03023 Lipid II flippase MurJ C5P03_03410 PF01687 Riboflavin kinase C5P03_03410 PF06574 FAD synthetase C5P03_03415 PF06827 Zinc finger found in FPG and IleRS C5P03_03415 PF00133 tRNA synthetases class I (I, L, M and V) C5P03_03415 PF08264 Anticodon-binding domain of tRNA C5P03_03420 PF01252 Signal peptidase (SPase) II C5P03_03425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5P03_03430 PF02401 LytB protein C5P03_03435 PF14245 Type IV pilin PilA C5P03_03435 PF07963 Prokaryotic N-terminal methylation motif C5P03_03455 PF05567 Neisseria PilC beta-propeller domain C5P03_03470 PF02540 NAD synthase C5P03_03470 PF00795 Carbon-nitrogen hydrolase C5P03_03475 PF00543 Nitrogen regulatory protein P-II C5P03_03485 PF02664 S-Ribosylhomocysteinase (LuxS) C5P03_03490 PF00990 Diguanylate cyclase, GGDEF domain C5P03_03495 PF00773 RNB domain C5P03_03495 PF08206 Ribonuclease B OB domain C5P03_03495 PF08461 Ribonuclease R winged-helix domain C5P03_03495 PF17876 Cold shock domain C5P03_03495 PF00575 S1 RNA binding domain C5P03_03500 PF00588 SpoU rRNA Methylase family C5P03_03500 PF08032 RNA 2'-O ribose methyltransferase substrate binding C5P03_03510 PF13673 Acetyltransferase (GNAT) domain C5P03_03530 PF01566 Natural resistance-associated macrophage protein C5P03_03535 PF01250 Ribosomal protein S6 C5P03_03540 PF01084 Ribosomal protein S18 C5P03_03545 PF03948 Ribosomal protein L9, C-terminal domain C5P03_03545 PF01281 Ribosomal protein L9, N-terminal domain C5P03_03550 PF00970 Oxidoreductase FAD-binding domain C5P03_03550 PF00175 Oxidoreductase NAD-binding domain C5P03_03575 PF00107 Zinc-binding dehydrogenase C5P03_03575 PF08240 Alcohol dehydrogenase GroES-like domain C5P03_03580 PF09335 SNARE associated Golgi protein C5P03_03585 PF00675 Insulinase (Peptidase family M16) C5P03_03585 PF05193 Peptidase M16 inactive domain C5P03_03590 PF04262 Glutamate-cysteine ligase C5P03_03600 PF00501 AMP-binding enzyme C5P03_03610 PF13673 Acetyltransferase (GNAT) domain C5P03_03610 PF00583 Acetyltransferase (GNAT) family C5P03_03620 PF07728 AAA domain (dynein-related subfamily) C5P03_03620 PF17868 AAA lid domain C5P03_03620 PF12592 Protein of unknown function (DUF3763) C5P03_03625 PF05762 VWA domain containing CoxE-like protein C5P03_03635 PF01037 Lrp/AsnC ligand binding domain C5P03_03645 PF00990 Diguanylate cyclase, GGDEF domain C5P03_03645 PF00072 Response regulator receiver domain C5P03_03650 PF00009 Elongation factor Tu GTP binding domain C5P03_03650 PF03144 Elongation factor Tu domain 2 C5P03_03650 PF16658 Class II release factor RF3, C-terminal domain C5P03_03660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C5P03_03670 PF03129 Anticodon binding domain C5P03_03670 PF04073 Aminoacyl-tRNA editing domain C5P03_03670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C5P03_03675 PF00672 HAMP domain C5P03_03675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_03680 PF07499 RuvA, C-terminal domain C5P03_03680 PF01330 RuvA N terminal domain C5P03_03685 PF05491 RuvB C-terminal winged helix domain C5P03_03685 PF17864 RuvB AAA lid domain C5P03_03685 PF05496 Holliday junction DNA helicase RuvB P-loop domain C5P03_03690 PF01654 Cytochrome bd terminal oxidase subunit I C5P03_03695 PF02322 Cytochrome bd terminal oxidase subunit II C5P03_03700 PF08173 Membrane bound YbgT-like protein C5P03_03705 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C5P03_03710 PF03061 Thioesterase superfamily C5P03_03715 PF01618 MotA/TolQ/ExbB proton channel family C5P03_03720 PF02472 Biopolymer transport protein ExbD/TolR C5P03_03730 PF07676 WD40-like Beta Propeller Repeat C5P03_03730 PF04052 TolB amino-terminal domain C5P03_03735 PF00691 OmpA family C5P03_03740 PF16331 TolA binding protein trimerisation C5P03_03740 PF13174 Tetratricopeptide repeat C5P03_03810 PF02445 Quinolinate synthetase A protein C5P03_03815 PF01263 Aldose 1-epimerase C5P03_03820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C5P03_03820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C5P03_03825 PF02446 4-alpha-glucanotransferase C5P03_03830 PF02806 Alpha amylase, C-terminal all-beta domain C5P03_03830 PF00128 Alpha amylase, catalytic domain C5P03_03830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C5P03_03835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C5P03_03835 PF00128 Alpha amylase, catalytic domain C5P03_03840 PF01641 SelR domain C5P03_03850 PF00027 Cyclic nucleotide-binding domain C5P03_03850 PF07885 Ion channel C5P03_03855 PF08239 Bacterial SH3 domain C5P03_03860 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C5P03_03860 PF14850 DNA-binding domain of Proline dehydrogenase C5P03_03860 PF01619 Proline dehydrogenase C5P03_03860 PF00171 Aldehyde dehydrogenase family C5P03_03865 PF00293 NUDIX domain C5P03_03865 PF09297 NADH pyrophosphatase zinc ribbon domain C5P03_03870 PF01208 Uroporphyrinogen decarboxylase (URO-D) C5P03_03875 PF00719 Inorganic pyrophosphatase C5P03_03880 PF02875 Mur ligase family, glutamate ligase domain C5P03_03880 PF08245 Mur ligase middle domain C5P03_03880 PF01225 Mur ligase family, catalytic domain C5P03_03885 PF02441 Flavoprotein C5P03_03890 PF00440 Bacterial regulatory proteins, tetR family C5P03_03895 PF00156 Phosphoribosyl transferase domain C5P03_03900 PF00005 ABC transporter C5P03_03905 PF01061 ABC-2 type transporter C5P03_03915 PF02569 Pantoate-beta-alanine ligase C5P03_03920 PF02548 Ketopantoate hydroxymethyltransferase C5P03_03925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C5P03_03930 PF01743 Poly A polymerase head domain C5P03_03930 PF12627 Probable RNA and SrmB- binding site of polymerase A C5P03_03930 PF12626 Polymerase A arginine-rich C-terminus C5P03_03935 PF00749 tRNA synthetases class I (E and Q), catalytic domain C5P03_03940 PF01258 Prokaryotic dksA/traR C4-type zinc finger C5P03_03945 PF03749 Sugar fermentation stimulation protein RE domain C5P03_03945 PF17746 SfsA N-terminal OB domain C5P03_03955 PF00271 Helicase conserved C-terminal domain C5P03_03955 PF04408 Helicase associated domain (HA2) C5P03_03955 PF08482 ATP-dependent helicase C-terminal C5P03_03955 PF00270 DEAD/DEAH box helicase C5P03_03960 PF14814 Bifunctional transglycosylase second domain C5P03_03960 PF00905 Penicillin binding protein transpeptidase domain C5P03_03960 PF00912 Transglycosylase C5P03_03965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C5P03_03970 PF00893 Small Multidrug Resistance protein C5P03_03975 PF00893 Small Multidrug Resistance protein C5P03_03980 PF03466 LysR substrate binding domain C5P03_03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_03985 PF11849 Domain of unknown function (DUF3369) C5P03_03995 PF01569 PAP2 superfamily C5P03_04010 PF00202 Aminotransferase class-III C5P03_04015 PF00654 Voltage gated chloride channel C5P03_04025 PF01521 Iron-sulphur cluster biosynthesis C5P03_04055 PF01810 LysE type translocator C5P03_04060 PF02954 Bacterial regulatory protein, Fis family C5P03_04065 PF01207 Dihydrouridine synthase (Dus) C5P03_04070 PF02321 Outer membrane efflux protein C5P03_04075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_04105 PF00072 Response regulator receiver domain C5P03_04110 PF00854 POT family C5P03_04115 PF00483 Nucleotidyl transferase C5P03_04125 PF00459 Inositol monophosphatase family C5P03_04130 PF03795 YCII-related domain C5P03_04135 PF04279 Intracellular septation protein A C5P03_04140 PF00282 Pyridoxal-dependent decarboxylase conserved domain C5P03_04145 PF03006 Haemolysin-III related C5P03_04150 PF02080 TrkA-C domain C5P03_04150 PF06826 Predicted Permease Membrane Region C5P03_04160 PF01584 CheW-like domain C5P03_04160 PF00072 Response regulator receiver domain C5P03_04165 PF13472 GDSL-like Lipase/Acylhydrolase family C5P03_04170 PF00005 ABC transporter C5P03_04180 PF08338 Domain of unknown function (DUF1731) C5P03_04180 PF01370 NAD dependent epimerase/dehydratase family C5P03_04185 PF12792 CSS motif domain associated with EAL C5P03_04185 PF00563 EAL domain C5P03_04200 PF02390 Putative methyltransferase C5P03_04205 PF04320 Protein with unknown function (DUF469) C5P03_04210 PF04960 Glutaminase C5P03_04215 PF00581 Rhodanese-like domain C5P03_04220 PF06004 Bacterial protein of unknown function (DUF903) C5P03_04225 PF00664 ABC transporter transmembrane region C5P03_04225 PF00005 ABC transporter C5P03_04230 PF00561 alpha/beta hydrolase fold C5P03_04240 PF00171 Aldehyde dehydrogenase family C5P03_04270 PF00801 PKD domain C5P03_04270 PF05547 Immune inhibitor A peptidase M6 C5P03_04275 PF06877 Regulator of ribonuclease activity B C5P03_04280 PF00563 EAL domain C5P03_04280 PF00990 Diguanylate cyclase, GGDEF domain C5P03_04280 PF03707 Bacterial signalling protein N terminal repeat C5P03_04300 PF09905 DNA-binding protein VF530 C5P03_04305 PF02666 Phosphatidylserine decarboxylase C5P03_04310 PF03193 RsgA GTPase C5P03_04315 PF00929 Exonuclease C5P03_04345 PF00313 'Cold-shock' DNA-binding domain C5P03_04355 PF00672 HAMP domain C5P03_04355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_04360 PF00749 tRNA synthetases class I (E and Q), catalytic domain C5P03_04390 PF00704 Glycosyl hydrolases family 18 C5P03_04390 PF06483 Chitinase C C5P03_04405 PF02472 Biopolymer transport protein ExbD/TolR C5P03_04410 PF01618 MotA/TolQ/ExbB proton channel family C5P03_04415 PF01618 MotA/TolQ/ExbB proton channel family C5P03_04425 PF07715 TonB-dependent Receptor Plug Domain C5P03_04425 PF00593 TonB dependent receptor C5P03_04435 PF12911 N-terminal TM domain of oligopeptide transport permease C C5P03_04435 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_04440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_04445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5P03_04445 PF00005 ABC transporter C5P03_04450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5P03_04450 PF00005 ABC transporter C5P03_04460 PF01546 Peptidase family M20/M25/M40 C5P03_04460 PF07687 Peptidase dimerisation domain C5P03_04475 PF00156 Phosphoribosyl transferase domain C5P03_04485 PF07417 Sigma factor-binding transcriptional regulator Crl C5P03_04490 PF00696 Amino acid kinase family C5P03_04490 PF01472 PUA domain C5P03_04495 PF00171 Aldehyde dehydrogenase family C5P03_04505 PF00582 Universal stress protein family C5P03_04525 PF00294 pfkB family carbohydrate kinase C5P03_04530 PF04227 Indigoidine synthase A like protein C5P03_04535 PF00194 Eukaryotic-type carbonic anhydrase C5P03_04540 PF00034 Cytochrome c C5P03_04540 PF03150 Di-haem cytochrome c peroxidase C5P03_04575 PF00550 Phosphopantetheine attachment site C5P03_04580 PF00550 Phosphopantetheine attachment site C5P03_04590 PF13193 AMP-binding enzyme C-terminal domain C5P03_04590 PF00501 AMP-binding enzyme C5P03_04595 PF07977 FabA-like domain C5P03_04605 PF00221 Aromatic amino acid lyase C5P03_04630 PF00109 Beta-ketoacyl synthase, N-terminal domain C5P03_04630 PF02801 Beta-ketoacyl synthase, C-terminal domain C5P03_04645 PF02801 Beta-ketoacyl synthase, C-terminal domain C5P03_04645 PF00109 Beta-ketoacyl synthase, N-terminal domain C5P03_04655 PF00994 Probable molybdopterin binding domain C5P03_04665 PF06738 Putative threonine/serine exporter C5P03_04670 PF12821 Threonine/Serine exporter, ThrE C5P03_04675 PF00186 Dihydrofolate reductase C5P03_04680 PF00005 ABC transporter C5P03_04680 PF00571 CBS domain C5P03_04685 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_04690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C5P03_04695 PF01507 Phosphoadenosine phosphosulfate reductase family C5P03_04710 PF02567 Phenazine biosynthesis-like protein C5P03_04715 PF00152 tRNA synthetases class II (D, K and N) C5P03_04715 PF01336 OB-fold nucleic acid binding domain C5P03_04725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_04725 PF00672 HAMP domain C5P03_04725 PF02743 Cache domain C5P03_04730 PF03616 Sodium/glutamate symporter C5P03_04735 PF00710 Asparaginase, N-terminal C5P03_04735 PF17763 Glutaminase/Asparaginase C-terminal domain C5P03_04740 PF07023 Protein of unknown function (DUF1315) C5P03_04745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C5P03_04745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C5P03_04760 PF01343 Peptidase family S49 C5P03_04765 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_04765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C5P03_04770 PF00881 Nitroreductase family C5P03_04780 PF14602 Hexapeptide repeat of succinyl-transferase C5P03_04780 PF12464 Maltose acetyltransferase C5P03_04785 PF01842 ACT domain C5P03_04785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5P03_04785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C5P03_04790 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C5P03_04795 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C5P03_04810 PF00107 Zinc-binding dehydrogenase C5P03_04810 PF08240 Alcohol dehydrogenase GroES-like domain C5P03_04815 PF03466 LysR substrate binding domain C5P03_04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_04820 PF02378 Phosphotransferase system, EIIC C5P03_04820 PF00367 phosphotransferase system, EIIB C5P03_04820 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C5P03_04825 PF00474 Sodium:solute symporter family C5P03_04830 PF06196 Protein of unknown function (DUF997) C5P03_04835 PF00289 Biotin carboxylase, N-terminal domain C5P03_04835 PF02785 Biotin carboxylase C-terminal domain C5P03_04835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C5P03_04840 PF00364 Biotin-requiring enzyme C5P03_04845 PF01220 Dehydroquinase class II C5P03_04850 PF00501 AMP-binding enzyme C5P03_04850 PF16177 Acetyl-coenzyme A synthetase N-terminus C5P03_04850 PF13193 AMP-binding enzyme C-terminal domain C5P03_04860 PF00990 Diguanylate cyclase, GGDEF domain C5P03_04860 PF00563 EAL domain C5P03_04860 PF03707 Bacterial signalling protein N terminal repeat C5P03_04880 PF02613 Nitrate reductase delta subunit C5P03_04900 PF00464 Serine hydroxymethyltransferase C5P03_04915 PF03477 ATP cone domain C5P03_04920 PF01872 RibD C-terminal domain C5P03_04920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C5P03_04925 PF00677 Lumazine binding domain C5P03_04930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C5P03_04930 PF00925 GTP cyclohydrolase II C5P03_04935 PF00885 6,7-dimethyl-8-ribityllumazine synthase C5P03_04940 PF01029 NusB family C5P03_04945 PF02769 AIR synthase related protein, C-terminal domain C5P03_04945 PF00586 AIR synthase related protein, N-terminal domain C5P03_04950 PF04608 Phosphatidylglycerophosphatase A C5P03_04955 PF00005 ABC transporter C5P03_04955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5P03_04960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_04970 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_04970 PF12911 N-terminal TM domain of oligopeptide transport permease C C5P03_04975 PF02779 Transketolase, pyrimidine binding domain C5P03_04975 PF02780 Transketolase, C-terminal domain C5P03_04975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C5P03_04980 PF00348 Polyprenyl synthetase C5P03_04985 PF02609 Exonuclease VII small subunit C5P03_04990 PF01618 MotA/TolQ/ExbB proton channel family C5P03_05010 PF01272 Transcription elongation factor, GreA/GreB, C-term C5P03_05010 PF03449 Transcription elongation factor, N-terminal C5P03_05020 PF01985 CRS1 / YhbY (CRM) domain C5P03_05025 PF01728 FtsJ-like methyltransferase C5P03_05030 PF17862 AAA+ lid domain C5P03_05030 PF00004 ATPase family associated with various cellular activities (AAA) C5P03_05030 PF06480 FtsH Extracellular C5P03_05030 PF01434 Peptidase family M41 C5P03_05035 PF00809 Pterin binding enzyme C5P03_05040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C5P03_05040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C5P03_05040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C5P03_05040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C5P03_05045 PF00121 Triosephosphate isomerase C5P03_05050 PF03840 Preprotein translocase SecG subunit C5P03_05065 PF17384 RimP C-terminal SH3 domain C5P03_05065 PF02576 RimP N-terminal domain C5P03_05070 PF00575 S1 RNA binding domain C5P03_05070 PF08529 NusA N-terminal domain C5P03_05070 PF13184 NusA-like KH domain C5P03_05075 PF08364 Bacterial translation initiation factor IF-2 associated region C5P03_05075 PF04760 Translation initiation factor IF-2, N-terminal region C5P03_05075 PF11987 Translation-initiation factor 2 C5P03_05075 PF00009 Elongation factor Tu GTP binding domain C5P03_05080 PF02033 Ribosome-binding factor A C5P03_05085 PF01509 TruB family pseudouridylate synthase (N terminal domain) C5P03_05085 PF09157 Pseudouridine synthase II TruB, C-terminal C5P03_05085 PF16198 tRNA pseudouridylate synthase B C-terminal domain C5P03_05090 PF00312 Ribosomal protein S15 C5P03_05095 PF00013 KH domain C5P03_05095 PF01138 3' exoribonuclease family, domain 1 C5P03_05095 PF00575 S1 RNA binding domain C5P03_05095 PF03725 3' exoribonuclease family, domain 2 C5P03_05095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C5P03_05105 PF00990 Diguanylate cyclase, GGDEF domain C5P03_05110 PF02635 DsrE/DsrF-like family C5P03_05115 PF06476 Protein of unknown function (DUF1090) C5P03_05125 PF03575 Peptidase family S51 C5P03_05150 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C5P03_05160 PF03734 L,D-transpeptidase catalytic domain C5P03_05160 PF17969 L,D-transpeptidase C-terminal domain C5P03_05170 PF01523 Putative modulator of DNA gyrase C5P03_05175 PF01523 Putative modulator of DNA gyrase C5P03_05180 PF00258 Flavodoxin C5P03_05185 PF02899 Phage integrase, N-terminal SAM-like domain C5P03_05185 PF00589 Phage integrase family C5P03_05190 PF17158 Membrane-associated sensor, integral membrane domain C5P03_05190 PF00990 Diguanylate cyclase, GGDEF domain C5P03_05195 PF01741 Large-conductance mechanosensitive channel, MscL C5P03_05205 PF01368 DHH family C5P03_05205 PF02272 DHHA1 domain C5P03_05205 PF17768 RecJ OB domain C5P03_05215 PF02508 Rnf-Nqr subunit, membrane protein C5P03_05220 PF06821 Serine hydrolase C5P03_05225 PF13302 Acetyltransferase (GNAT) domain C5P03_05270 PF00665 Integrase core domain C5P03_05275 PF01695 IstB-like ATP binding protein C5P03_05315 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C5P03_05315 PF04055 Radical SAM superfamily C5P03_05320 PF03099 Biotin/lipoate A/B protein ligase family C5P03_05325 PF04359 Protein of unknown function (DUF493) C5P03_05330 PF07943 Penicillin-binding protein 5, C-terminal domain C5P03_05330 PF00768 D-alanyl-D-alanine carboxypeptidase C5P03_05335 PF03330 Lytic transglycolase C5P03_05335 PF05036 Sporulation related domain C5P03_05345 PF01098 Cell cycle protein C5P03_05350 PF03717 Penicillin-binding Protein dimerisation domain C5P03_05350 PF00905 Penicillin binding protein transpeptidase domain C5P03_05355 PF02590 Predicted SPOUT methyltransferase C5P03_05365 PF01467 Cytidylyltransferase-like C5P03_05385 PF08264 Anticodon-binding domain of tRNA C5P03_05385 PF13603 Leucyl-tRNA synthetase, Domain 2 C5P03_05385 PF00133 tRNA synthetases class I (I, L, M and V) C5P03_05390 PF07295 Zinc-ribbon containing domain C5P03_05395 PF00795 Carbon-nitrogen hydrolase C5P03_05400 PF00571 CBS domain C5P03_05400 PF03471 Transporter associated domain C5P03_05405 PF02130 Uncharacterized protein family UPF0054 C5P03_05410 PF02562 PhoH-like protein C5P03_05415 PF00919 Uncharacterized protein family UPF0004 C5P03_05415 PF01938 TRAM domain C5P03_05415 PF04055 Radical SAM superfamily C5P03_05420 PF01494 FAD binding domain C5P03_05425 PF00313 'Cold-shock' DNA-binding domain C5P03_05430 PF05230 MASE2 domain C5P03_05430 PF00990 Diguanylate cyclase, GGDEF domain C5P03_05435 PF03466 LysR substrate binding domain C5P03_05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_05445 PF13419 Haloacid dehalogenase-like hydrolase C5P03_05465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C5P03_05465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5P03_05475 PF09285 Elongation factor P, C-terminal C5P03_05475 PF08207 Elongation factor P (EF-P) KOW-like domain C5P03_05475 PF01132 Elongation factor P (EF-P) OB domain C5P03_05485 PF00478 IMP dehydrogenase / GMP reductase domain C5P03_05495 PF08521 Two-component sensor kinase N-terminal C5P03_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_05495 PF00512 His Kinase A (phospho-acceptor) domain C5P03_05500 PF00486 Transcriptional regulatory protein, C terminal C5P03_05500 PF00072 Response regulator receiver domain C5P03_05520 PF00501 AMP-binding enzyme C5P03_05535 PF06224 Winged helix DNA-binding domain C5P03_05555 PF02313 Fumarate reductase subunit D C5P03_05560 PF02300 Fumarate reductase subunit C C5P03_05565 PF13085 2Fe-2S iron-sulfur cluster binding domain C5P03_05565 PF13183 4Fe-4S dicluster domain C5P03_05570 PF02910 Fumarate reductase flavoprotein C-term C5P03_05570 PF00890 FAD binding domain C5P03_05575 PF00672 HAMP domain C5P03_05575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_05575 PF02743 Cache domain C5P03_05580 PF03009 Glycerophosphoryl diester phosphodiesterase family C5P03_05585 PF12795 Mechanosensitive ion channel porin domain C5P03_05585 PF12794 Mechanosensitive ion channel inner membrane domain 1 C5P03_05585 PF00924 Mechanosensitive ion channel C5P03_05605 PF01476 LysM domain C5P03_05605 PF08525 Opacity-associated protein A N-terminal motif C5P03_05605 PF01551 Peptidase family M23 C5P03_05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_05620 PF03466 LysR substrate binding domain C5P03_05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_05640 PF03466 LysR substrate binding domain C5P03_05645 PF00912 Transglycosylase C5P03_05645 PF17092 Penicillin-binding protein OB-like domain C5P03_05645 PF00905 Penicillin binding protein transpeptidase domain C5P03_05670 PF03958 Bacterial type II/III secretion system short domain C5P03_05670 PF11741 AMIN domain C5P03_05670 PF00263 Bacterial type II and III secretion system protein C5P03_05670 PF07660 Secretin and TonB N terminus short domain C5P03_05675 PF01202 Shikimate kinase C5P03_05680 PF01761 3-dehydroquinate synthase C5P03_05690 PF02086 D12 class N6 adenine-specific DNA methyltransferase C5P03_05695 PF00834 Ribulose-phosphate 3 epimerase family C5P03_05700 PF13419 Haloacid dehalogenase-like hydrolase C5P03_05705 PF00579 tRNA synthetases class I (W and Y) C5P03_05715 PF00117 Glutamine amidotransferase class-I C5P03_05720 PF00202 Aminotransferase class-III C5P03_05725 PF04958 Arginine N-succinyltransferase beta subunit C5P03_05730 PF00171 Aldehyde dehydrogenase family C5P03_05740 PF13419 Haloacid dehalogenase-like hydrolase C5P03_05745 PF07690 Major Facilitator Superfamily C5P03_05750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C5P03_05750 PF10371 Domain of unknown function C5P03_05750 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C5P03_05750 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C5P03_05750 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C5P03_05755 PF07690 Major Facilitator Superfamily C5P03_05760 PF00005 ABC transporter C5P03_05760 PF12848 ABC transporter C5P03_05775 PF16657 Maltogenic Amylase, C-terminal domain C5P03_05775 PF00128 Alpha amylase, catalytic domain C5P03_05785 PF00012 Hsp70 protein C5P03_05800 PF07859 alpha/beta hydrolase fold C5P03_05815 PF01048 Phosphorylase superfamily C5P03_05820 PF04973 Nicotinamide mononucleotide transporter C5P03_05825 PF03600 Citrate transporter C5P03_05825 PF02080 TrkA-C domain C5P03_05895 PF01926 50S ribosome-binding GTPase C5P03_05895 PF06071 Protein of unknown function (DUF933) C5P03_05900 PF01195 Peptidyl-tRNA hydrolase C5P03_05905 PF00149 Calcineurin-like phosphoesterase C5P03_05905 PF02872 5'-nucleotidase, C-terminal domain C5P03_05910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C5P03_05910 PF14572 Phosphoribosyl synthetase-associated domain C5P03_05920 PF00288 GHMP kinases N terminal domain C5P03_05920 PF08544 GHMP kinases C terminal C5P03_05925 PF03550 Outer membrane lipoprotein LolB C5P03_05930 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C5P03_05930 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C5P03_05930 PF01488 Shikimate / quinate 5-dehydrogenase C5P03_05935 PF03462 PCRF domain C5P03_05935 PF00472 RF-1 domain C5P03_05940 PF17827 PrmC N-terminal domain C5P03_05940 PF13847 Methyltransferase domain C5P03_05955 PF00793 DAHP synthetase I family C5P03_05960 PF00375 Sodium:dicarboxylate symporter family C5P03_05965 PF01228 Glycine radical C5P03_05980 PF03167 Uracil DNA glycosylase superfamily C5P03_05995 PF00923 Transaldolase/Fructose-6-phosphate aldolase C5P03_06000 PF01235 Sodium:alanine symporter family C5P03_06005 PF13559 Domain of unknown function (DUF4129) C5P03_06005 PF01841 Transglutaminase-like superfamily C5P03_06005 PF11992 Domain of unknown function (DUF3488) C5P03_06015 PF17863 AAA lid domain C5P03_06015 PF07726 ATPase family associated with various cellular activities (AAA) C5P03_06020 PF00144 Beta-lactamase C5P03_06025 PF07690 Major Facilitator Superfamily C5P03_06030 PF03466 LysR substrate binding domain C5P03_06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_06035 PF03652 Holliday junction resolvase C5P03_06040 PF02622 Uncharacterized ACR, COG1678 C5P03_06050 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C5P03_06050 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C5P03_06055 PF04452 RNA methyltransferase C5P03_06060 PF04231 Endonuclease I C5P03_06065 PF17283 SprT-like zinc ribbon domain C5P03_06065 PF10263 SprT-like family C5P03_06070 PF00438 S-adenosylmethionine synthetase, N-terminal domain C5P03_06070 PF02772 S-adenosylmethionine synthetase, central domain C5P03_06070 PF02773 S-adenosylmethionine synthetase, C-terminal domain C5P03_06075 PF02779 Transketolase, pyrimidine binding domain C5P03_06075 PF02780 Transketolase, C-terminal domain C5P03_06075 PF00456 Transketolase, thiamine diphosphate binding domain C5P03_06085 PF01042 Endoribonuclease L-PSP C5P03_06090 PF03702 Anhydro-N-acetylmuramic acid kinase C5P03_06095 PF01476 LysM domain C5P03_06095 PF08525 Opacity-associated protein A N-terminal motif C5P03_06095 PF01551 Peptidase family M23 C5P03_06100 PF00579 tRNA synthetases class I (W and Y) C5P03_06115 PF00535 Glycosyl transferase family 2 C5P03_06130 PF01471 Putative peptidoglycan binding domain C5P03_06130 PF03734 L,D-transpeptidase catalytic domain C5P03_06135 PF05951 Bacterial protein of unknown function (DUF882) C5P03_06145 PF03458 UPF0126 domain C5P03_06155 PF02463 RecF/RecN/SMC N terminal domain C5P03_06155 PF06470 SMC proteins Flexible Hinge Domain C5P03_06160 PF04354 ZipA, C-terminal FtsZ-binding domain C5P03_06165 PF00533 BRCA1 C Terminus (BRCT) domain C5P03_06165 PF12826 Helix-hairpin-helix motif C5P03_06165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C5P03_06165 PF01653 NAD-dependent DNA ligase adenylation domain C5P03_06165 PF03120 NAD-dependent DNA ligase OB-fold domain C5P03_06175 PF13597 Anaerobic ribonucleoside-triphosphate reductase C5P03_06175 PF03477 ATP cone domain C5P03_06210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_06210 PF00529 HlyD membrane-fusion protein of T1SS C5P03_06215 PF01047 MarR family C5P03_06230 PF00390 Malic enzyme, N-terminal domain C5P03_06230 PF03949 Malic enzyme, NAD binding domain C5P03_06235 PF00989 PAS fold C5P03_06235 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C5P03_06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_06235 PF17203 Single cache domain 3 C5P03_06240 PF00072 Response regulator receiver domain C5P03_06240 PF12431 Transcriptional regulator C5P03_06265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C5P03_06270 PF00072 Response regulator receiver domain C5P03_06270 PF00486 Transcriptional regulatory protein, C terminal C5P03_06275 PF00512 His Kinase A (phospho-acceptor) domain C5P03_06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_06275 PF11808 Phosphate regulon sensor protein PhoR C5P03_06275 PF00989 PAS fold C5P03_06280 PF12849 PBP superfamily domain C5P03_06285 PF01435 Peptidase family M48 C5P03_06295 PF00480 ROK family C5P03_06300 PF03932 CutC family C5P03_06305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5P03_06305 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C5P03_06310 PF00005 ABC transporter C5P03_06330 PF00293 NUDIX domain C5P03_06340 PF08534 Redoxin C5P03_06340 PF00462 Glutaredoxin C5P03_06345 PF01699 Sodium/calcium exchanger protein C5P03_06350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C5P03_06350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C5P03_06355 PF01235 Sodium:alanine symporter family C5P03_06365 PF00860 Permease family C5P03_06370 PF00072 Response regulator receiver domain C5P03_06370 PF00990 Diguanylate cyclase, GGDEF domain C5P03_06375 PF10692 Protein of unknown function (DUF2498) C5P03_06380 PF01554 MatE C5P03_06385 PF12833 Helix-turn-helix domain C5P03_06390 PF03949 Malic enzyme, NAD binding domain C5P03_06390 PF00390 Malic enzyme, N-terminal domain C5P03_06395 PF01389 OmpA-like transmembrane domain C5P03_06395 PF00691 OmpA family C5P03_06400 PF01389 OmpA-like transmembrane domain C5P03_06400 PF00691 OmpA family C5P03_06405 PF00691 OmpA family C5P03_06405 PF01389 OmpA-like transmembrane domain C5P03_06420 PF00209 Sodium:neurotransmitter symporter family C5P03_06425 PF01734 Patatin-like phospholipase C5P03_06430 PF05230 MASE2 domain C5P03_06430 PF00990 Diguanylate cyclase, GGDEF domain C5P03_06435 PF13533 Biotin-lipoyl like C5P03_06440 PF00873 AcrB/AcrD/AcrF family C5P03_06450 PF11842 Domain of unknown function (DUF3362) C5P03_06450 PF08497 Radical SAM N-terminal C5P03_06450 PF04055 Radical SAM superfamily C5P03_06475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C5P03_06480 PF02075 Crossover junction endodeoxyribonuclease RuvC C5P03_06485 PF00230 Major intrinsic protein C5P03_06490 PF10145 Phage-related minor tail protein C5P03_06490 PF01551 Peptidase family M23 C5P03_06490 PF01464 Transglycosylase SLT domain C5P03_06495 PF00128 Alpha amylase, catalytic domain C5P03_06500 PF01551 Peptidase family M23 C5P03_06515 PF13091 PLD-like domain C5P03_06515 PF13396 Phospholipase_D-nuclease N-terminal C5P03_06525 PF01842 ACT domain C5P03_06525 PF00551 Formyl transferase C5P03_06530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C5P03_06545 PF01648 4'-phosphopantetheinyl transferase superfamily C5P03_06550 PF00877 NlpC/P60 family C5P03_06555 PF05971 RNA methyltransferase C5P03_06560 PF01575 MaoC like domain C5P03_06570 PF17969 L,D-transpeptidase C-terminal domain C5P03_06570 PF01476 LysM domain C5P03_06570 PF03734 L,D-transpeptidase catalytic domain C5P03_06605 PF00665 Integrase core domain C5P03_06610 PF01695 IstB-like ATP binding protein C5P03_06620 PF05593 RHS Repeat C5P03_06620 PF03527 RHS protein C5P03_06660 PF00440 Bacterial regulatory proteins, tetR family C5P03_06665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C5P03_06665 PF02770 Acyl-CoA dehydrogenase, middle domain C5P03_06665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C5P03_06665 PF09317 Domain of unknown function (DUF1974) C5P03_06670 PF00873 AcrB/AcrD/AcrF family C5P03_06680 PF00224 Pyruvate kinase, barrel domain C5P03_06680 PF02887 Pyruvate kinase, alpha/beta domain C5P03_06685 PF01418 Helix-turn-helix domain, rpiR family C5P03_06685 PF01380 SIS domain C5P03_06690 PF02685 Glucokinase C5P03_06695 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C5P03_06695 PF00989 PAS fold C5P03_06695 PF17203 Single cache domain 3 C5P03_06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_06700 PF00486 Transcriptional regulatory protein, C terminal C5P03_06700 PF00072 Response regulator receiver domain C5P03_06710 PF00919 Uncharacterized protein family UPF0004 C5P03_06710 PF04055 Radical SAM superfamily C5P03_06710 PF18693 TRAM domain C5P03_06715 PF00072 Response regulator receiver domain C5P03_06730 PF02001 Protein of unknown function DUF134 C5P03_06745 PF07969 Amidohydrolase family C5P03_06755 PF02049 Flagellar hook-basal body complex protein FliE C5P03_06760 PF08345 Flagellar M-ring protein C-terminal C5P03_06760 PF01514 Secretory protein of YscJ/FliF family C5P03_06765 PF14842 FliG N-terminal domain C5P03_06765 PF14841 FliG middle domain C5P03_06765 PF01706 FliG C-terminal domain C5P03_06775 PF18269 T3SS EscN ATPase C-terminal domain C5P03_06775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5P03_06795 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C5P03_06795 PF02154 Flagellar motor switch protein FliM C5P03_06800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C5P03_06805 PF04347 Flagellar biosynthesis protein, FliO C5P03_06810 PF00813 FliP family C5P03_06815 PF01313 Bacterial export proteins, family 3 C5P03_06820 PF01311 Bacterial export proteins, family 1 C5P03_06825 PF01312 FlhB HrpN YscU SpaS Family C5P03_06830 PF00771 FHIPEP family C5P03_06835 PF00448 SRP54-type protein, GTPase domain C5P03_06840 PF10609 NUBPL iron-transfer P-loop NTPase C5P03_06845 PF04539 Sigma-70 region 3 C5P03_06845 PF04545 Sigma-70, region 4 C5P03_06845 PF04542 Sigma-70 region 2 C5P03_06850 PF00072 Response regulator receiver domain C5P03_06855 PF04344 Chemotaxis phosphatase, CheZ C5P03_06860 PF07194 P2 response regulator binding domain C5P03_06860 PF02895 Signal transducing histidine kinase, homodimeric domain C5P03_06860 PF01584 CheW-like domain C5P03_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_06860 PF01627 Hpt domain C5P03_06865 PF00072 Response regulator receiver domain C5P03_06865 PF01339 CheB methylesterase C5P03_06870 PF01618 MotA/TolQ/ExbB proton channel family C5P03_06875 PF00691 OmpA family C5P03_06875 PF13677 Membrane MotB of proton-channel complex MotA/MotB C5P03_06880 PF13614 AAA domain C5P03_06890 PF01584 CheW-like domain C5P03_06900 PF00005 ABC transporter C5P03_06905 PF03379 CcmB protein C5P03_06910 PF01578 Cytochrome C assembly protein C5P03_06915 PF04995 Heme exporter protein D (CcmD) C5P03_06920 PF03100 CcmE C5P03_06925 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C5P03_06925 PF01578 Cytochrome C assembly protein C5P03_06930 PF08534 Redoxin C5P03_06935 PF03918 Cytochrome C biogenesis protein C5P03_06945 PF04333 MlaA lipoprotein C5P03_06950 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C5P03_06950 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C5P03_06955 PF00462 Glutaredoxin C5P03_06960 PF01029 NusB family C5P03_06960 PF01189 16S rRNA methyltransferase RsmB/F C5P03_06975 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C5P03_06975 PF01243 Pyridoxamine 5'-phosphate oxidase C5P03_06980 PF00043 Glutathione S-transferase, C-terminal domain C5P03_06980 PF13417 Glutathione S-transferase, N-terminal domain C5P03_06990 PF13508 Acetyltransferase (GNAT) domain C5P03_07010 PF08007 Cupin superfamily protein C5P03_07015 PF00206 Lyase C5P03_07015 PF08328 Adenylosuccinate lyase C-terminal C5P03_07020 PF04356 Protein of unknown function (DUF489) C5P03_07030 PF00293 NUDIX domain C5P03_07035 PF00849 RNA pseudouridylate synthase C5P03_07045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C5P03_07050 PF07690 Major Facilitator Superfamily C5P03_07055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C5P03_07055 PF02378 Phosphotransferase system, EIIC C5P03_07055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C5P03_07085 PF00290 Tryptophan synthase alpha chain C5P03_07090 PF00291 Pyridoxal-phosphate dependent enzyme C5P03_07095 PF00218 Indole-3-glycerol phosphate synthase C5P03_07095 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C5P03_07100 PF02885 Glycosyl transferase family, helical bundle domain C5P03_07100 PF00591 Glycosyl transferase family, a/b domain C5P03_07105 PF00117 Glutamine amidotransferase class-I C5P03_07105 PF02885 Glycosyl transferase family, helical bundle domain C5P03_07105 PF00591 Glycosyl transferase family, a/b domain C5P03_07110 PF00425 chorismate binding enzyme C5P03_07110 PF04715 Anthranilate synthase component I, N terminal region C5P03_07115 PF02811 PHP domain C5P03_07120 PF01300 Telomere recombination C5P03_07125 PF02616 Segregation and condensation protein ScpA C5P03_07130 PF04079 Segregation and condensation complex subunit ScpB C5P03_07135 PF00849 RNA pseudouridylate synthase C5P03_07135 PF01479 S4 domain C5P03_07155 PF08361 MAATS-type transcriptional repressor, C-terminal region C5P03_07155 PF00440 Bacterial regulatory proteins, tetR family C5P03_07160 PF00529 HlyD membrane-fusion protein of T1SS C5P03_07160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_07165 PF00873 AcrB/AcrD/AcrF family C5P03_07170 PF02321 Outer membrane efflux protein C5P03_07180 PF16363 GDP-mannose 4,6 dehydratase C5P03_07185 PF04321 RmlD substrate binding domain C5P03_07190 PF00483 Nucleotidyl transferase C5P03_07195 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C5P03_07205 PF00437 Type II/IV secretion system protein C5P03_07205 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C5P03_07210 PF00482 Type II secretion system (T2SS), protein F C5P03_07215 PF07963 Prokaryotic N-terminal methylation motif C5P03_07215 PF08334 Type II secretion system (T2SS), protein G C5P03_07245 PF03958 Bacterial type II/III secretion system short domain C5P03_07245 PF00263 Bacterial type II and III secretion system protein C5P03_07255 PF00005 ABC transporter C5P03_07270 PF02350 UDP-N-acetylglucosamine 2-epimerase C5P03_07290 PF03600 Citrate transporter C5P03_07290 PF02080 TrkA-C domain C5P03_07295 PF03600 Citrate transporter C5P03_07295 PF02080 TrkA-C domain C5P03_07310 PF01370 NAD dependent epimerase/dehydratase family C5P03_07315 PF00953 Glycosyl transferase family 4 C5P03_07320 PF02719 Polysaccharide biosynthesis protein C5P03_07345 PF13439 Glycosyltransferase Family 4 C5P03_07345 PF00534 Glycosyl transferases group 1 C5P03_07355 PF02397 Bacterial sugar transferase C5P03_07365 PF04337 Protein of unknown function, DUF480 C5P03_07370 PF04434 SWIM zinc finger C5P03_07370 PF00271 Helicase conserved C-terminal domain C5P03_07370 PF00176 SNF2 family N-terminal domain C5P03_07380 PF00665 Integrase core domain C5P03_07385 PF01695 IstB-like ATP binding protein C5P03_07400 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C5P03_07405 PF00676 Dehydrogenase E1 component C5P03_07410 PF02780 Transketolase, C-terminal domain C5P03_07410 PF02779 Transketolase, pyrimidine binding domain C5P03_07420 PF02817 e3 binding domain C5P03_07420 PF00364 Biotin-requiring enzyme C5P03_07420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C5P03_07425 PF00313 'Cold-shock' DNA-binding domain C5P03_07465 PF01966 HD domain C5P03_07465 PF11871 Domain of unknown function (DUF3391) C5P03_07470 PF01479 S4 domain C5P03_07470 PF00849 RNA pseudouridylate synthase C5P03_07480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_07485 PF12850 Calcineurin-like phosphoesterase superfamily domain C5P03_07505 PF00072 Response regulator receiver domain C5P03_07505 PF01584 CheW-like domain C5P03_07510 PF03705 CheR methyltransferase, all-alpha domain C5P03_07510 PF01739 CheR methyltransferase, SAM binding domain C5P03_07515 PF00460 Flagella basal body rod protein C5P03_07520 PF00460 Flagella basal body rod protein C5P03_07520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_07530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_07530 PF07559 Flagellar basal body protein FlaE C5P03_07530 PF00460 Flagella basal body rod protein C5P03_07535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_07535 PF00460 Flagella basal body rod protein C5P03_07540 PF00460 Flagella basal body rod protein C5P03_07540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5P03_07545 PF02107 Flagellar L-ring protein C5P03_07550 PF02119 Flagellar P-ring protein C5P03_07555 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C5P03_07555 PF10135 Rod binding protein C5P03_07570 PF00571 CBS domain C5P03_07570 PF01769 Divalent cation transporter C5P03_07570 PF03448 MgtE intracellular N domain C5P03_07575 PF02541 Ppx/GppA phosphatase family C5P03_07580 PF13090 Polyphosphate kinase C-terminal domain 2 C5P03_07580 PF02503 Polyphosphate kinase middle domain C5P03_07580 PF17941 Polyphosphate kinase C-terminal domain 1 C5P03_07580 PF13089 Polyphosphate kinase N-terminal domain C5P03_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_07600 PF00512 His Kinase A (phospho-acceptor) domain C5P03_07600 PF00989 PAS fold C5P03_07605 PF00158 Sigma-54 interaction domain C5P03_07605 PF02954 Bacterial regulatory protein, Fis family C5P03_07610 PF01784 NIF3 (NGG1p interacting factor 3) C5P03_07615 PF00551 Formyl transferase C5P03_07620 PF02769 AIR synthase related protein, C-terminal domain C5P03_07620 PF00586 AIR synthase related protein, N-terminal domain C5P03_07635 PF00308 Bacterial dnaA protein C5P03_07640 PF00463 Isocitrate lyase family C5P03_07645 PF01274 Malate synthase C5P03_07655 PF14437 MafB19-like deaminase C5P03_07660 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_07665 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_07675 PF01895 PhoU domain C5P03_07680 PF00571 CBS domain C5P03_07680 PF03471 Transporter associated domain C5P03_07680 PF01595 Cyclin M transmembrane N-terminal domain C5P03_07695 PF13520 Amino acid permease C5P03_07700 PF04116 Fatty acid hydroxylase superfamily C5P03_07705 PF00005 ABC transporter C5P03_07710 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_07715 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_07720 PF00990 Diguanylate cyclase, GGDEF domain C5P03_07720 PF08448 PAS fold C5P03_07725 PF07690 Major Facilitator Superfamily C5P03_07730 PF05231 MASE1 C5P03_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_07730 PF07730 Histidine kinase C5P03_07735 PF00196 Bacterial regulatory proteins, luxR family C5P03_07735 PF00072 Response regulator receiver domain C5P03_07740 PF01272 Transcription elongation factor, GreA/GreB, C-term C5P03_07740 PF14760 Rnk N-terminus C5P03_07755 PF00245 Alkaline phosphatase C5P03_07760 PF00245 Alkaline phosphatase C5P03_07765 PF01926 50S ribosome-binding GTPase C5P03_07770 PF00850 Histone deacetylase domain C5P03_07780 PF06733 DEAD_2 C5P03_07780 PF13307 Helicase C-terminal domain C5P03_07785 PF13609 Gram-negative porin C5P03_07795 PF00155 Aminotransferase class I and II C5P03_07800 PF05872 Bacterial protein of unknown function (DUF853) C5P03_07815 PF00753 Metallo-beta-lactamase superfamily C5P03_07815 PF03772 Competence protein C5P03_07820 PF00005 ABC transporter C5P03_07820 PF00664 ABC transporter transmembrane region C5P03_07825 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C5P03_07830 PF03966 Trm112p-like protein C5P03_07835 PF02348 Cytidylyltransferase C5P03_07840 PF00072 Response regulator receiver domain C5P03_07840 PF00196 Bacterial regulatory proteins, luxR family C5P03_07845 PF01541 GIY-YIG catalytic domain C5P03_07845 PF08459 UvrC Helix-hairpin-helix N-terminal C5P03_07845 PF02151 UvrB/uvrC motif C5P03_07850 PF01066 CDP-alcohol phosphatidyltransferase C5P03_07870 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system C5P03_08050 PF06892 Phage regulatory protein CII (CP76) C5P03_08065 PF00717 Peptidase S24-like C5P03_08075 PF02899 Phage integrase, N-terminal SAM-like domain C5P03_08075 PF00589 Phage integrase family C5P03_08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_08085 PF03466 LysR substrate binding domain C5P03_08105 PF00149 Calcineurin-like phosphoesterase C5P03_08115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C5P03_08120 PF01406 tRNA synthetases class I (C) catalytic domain C5P03_08120 PF09190 DALR domain C5P03_08180 PF01169 Uncharacterized protein family UPF0016 C5P03_08185 PF01253 Translation initiation factor SUI1 C5P03_08195 PF07670 Nucleoside recognition C5P03_08195 PF02421 Ferrous iron transport protein B C5P03_08195 PF07664 Ferrous iron transport protein B C terminus C5P03_08210 PF00483 Nucleotidyl transferase C5P03_08215 PF00437 Type II/IV secretion system protein C5P03_08225 PF01627 Hpt domain C5P03_08225 PF00989 PAS fold C5P03_08225 PF00072 Response regulator receiver domain C5P03_08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_08225 PF00512 His Kinase A (phospho-acceptor) domain C5P03_08225 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_08230 PF01032 FecCD transport family C5P03_08235 PF00005 ABC transporter C5P03_08240 PF00793 DAHP synthetase I family C5P03_08245 PF01219 Prokaryotic diacylglycerol kinase C5P03_08250 PF01842 ACT domain C5P03_08250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C5P03_08250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5P03_08255 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C5P03_08260 PF01812 5-formyltetrahydrofolate cyclo-ligase family C5P03_08275 PF05173 Dihydrodipicolinate reductase, C-terminus C5P03_08275 PF01113 Dihydrodipicolinate reductase, N-terminus C5P03_08280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C5P03_08280 PF00117 Glutamine amidotransferase class-I C5P03_08285 PF02142 MGS-like domain C5P03_08285 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C5P03_08285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C5P03_08290 PF00682 HMGL-like C5P03_08290 PF08502 LeuA allosteric (dimerisation) domain C5P03_08295 PF07759 Protein of unknown function (DUF1615) C5P03_08310 PF08378 Nuclease-related domain C5P03_08325 PF13302 Acetyltransferase (GNAT) domain C5P03_08330 PF00271 Helicase conserved C-terminal domain C5P03_08330 PF00270 DEAD/DEAH box helicase C5P03_08355 PF00376 MerR family regulatory protein C5P03_08355 PF09278 MerR, DNA binding C5P03_08370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C5P03_08370 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_08375 PF01493 GXGXG motif C5P03_08375 PF04898 Glutamate synthase central domain C5P03_08375 PF00310 Glutamine amidotransferases class-II C5P03_08375 PF01645 Conserved region in glutamate synthase C5P03_08380 PF04055 Radical SAM superfamily C5P03_08380 PF16199 Radical_SAM C-terminal domain C5P03_08385 PF03412 Peptidase C39 family C5P03_08385 PF00005 ABC transporter C5P03_08385 PF00664 ABC transporter transmembrane region C5P03_08450 PF12241 Trans-2-enoyl-CoA reductase catalytic region C5P03_08450 PF07055 Enoyl reductase FAD binding domain C5P03_08450 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C5P03_08455 PF03606 C4-dicarboxylate anaerobic carrier C5P03_08460 PF00155 Aminotransferase class I and II C5P03_08470 PF00462 Glutaredoxin C5P03_08475 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C5P03_08480 PF00271 Helicase conserved C-terminal domain C5P03_08480 PF04851 Type III restriction enzyme, res subunit C5P03_08485 PF00529 HlyD membrane-fusion protein of T1SS C5P03_08485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_08490 PF11742 Protein of unknown function (DUF3302) C5P03_08495 PF02554 Carbon starvation protein CstA C5P03_08500 PF04397 LytTr DNA-binding domain C5P03_08500 PF00072 Response regulator receiver domain C5P03_08505 PF07694 5TMR of 5TMR-LYT C5P03_08505 PF06580 Histidine kinase C5P03_08510 PF11871 Domain of unknown function (DUF3391) C5P03_08510 PF01966 HD domain C5P03_08515 PF00171 Aldehyde dehydrogenase family C5P03_08515 PF00465 Iron-containing alcohol dehydrogenase C5P03_08525 PF01914 MarC family integral membrane protein C5P03_08530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_08535 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_08540 PF12911 N-terminal TM domain of oligopeptide transport permease C C5P03_08540 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_08545 PF00005 ABC transporter C5P03_08545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5P03_08555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5P03_08555 PF00005 ABC transporter C5P03_08560 PF03741 Integral membrane protein TerC family C5P03_08565 PF00842 Alanine racemase, C-terminal domain C5P03_08565 PF01168 Alanine racemase, N-terminal domain C5P03_08575 PF00375 Sodium:dicarboxylate symporter family C5P03_08590 PF01979 Amidohydrolase family C5P03_08600 PF00672 HAMP domain C5P03_08600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_08605 PF01230 HIT domain C5P03_08640 PF02355 Protein export membrane protein C5P03_08640 PF13721 SecD export protein N-terminal TM region C5P03_08640 PF07549 SecD/SecF GG Motif C5P03_08645 PF07549 SecD/SecF GG Motif C5P03_08645 PF02355 Protein export membrane protein C5P03_08650 PF13426 PAS domain C5P03_08650 PF08447 PAS fold C5P03_08650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_08665 PF00361 Proton-conducting membrane transporter C5P03_08670 PF00361 Proton-conducting membrane transporter C5P03_08675 PF00361 Proton-conducting membrane transporter C5P03_08675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C5P03_08680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C5P03_08685 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C5P03_08690 PF12838 4Fe-4S dicluster domain C5P03_08695 PF00146 NADH dehydrogenase C5P03_08700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C5P03_08700 PF00384 Molybdopterin oxidoreductase C5P03_08700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C5P03_08705 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C5P03_08705 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C5P03_08715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C5P03_08715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C5P03_08720 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C5P03_08725 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C5P03_08730 PF00691 OmpA family C5P03_08730 PF13677 Membrane MotB of proton-channel complex MotA/MotB C5P03_08735 PF01618 MotA/TolQ/ExbB proton channel family C5P03_08750 PF04536 TPM domain C5P03_08760 PF03411 Penicillin-insensitive murein endopeptidase C5P03_08765 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_08770 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_08775 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_08780 PF00005 ABC transporter C5P03_08790 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C5P03_08795 PF00248 Aldo/keto reductase family C5P03_08805 PF00106 short chain dehydrogenase C5P03_08810 PF01212 Beta-eliminating lyase C5P03_08820 PF00072 Response regulator receiver domain C5P03_08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_08825 PF03466 LysR substrate binding domain C5P03_08840 PF03707 Bacterial signalling protein N terminal repeat C5P03_08840 PF00990 Diguanylate cyclase, GGDEF domain C5P03_08840 PF00563 EAL domain C5P03_08845 PF00881 Nitroreductase family C5P03_08860 PF07690 Major Facilitator Superfamily C5P03_08865 PF03466 LysR substrate binding domain C5P03_08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_08870 PF03466 LysR substrate binding domain C5P03_08875 PF00925 GTP cyclohydrolase II C5P03_08880 PF02224 Cytidylate kinase C5P03_08885 PF00575 S1 RNA binding domain C5P03_08890 PF00216 Bacterial DNA-binding protein C5P03_08900 PF18073 Rubredoxin metal binding domain C5P03_08905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C5P03_08920 PF06508 Queuosine biosynthesis protein QueC C5P03_08925 PF04055 Radical SAM superfamily C5P03_08930 PF12843 Putative quorum-sensing-regulated virulence factor C5P03_08935 PF01923 Cobalamin adenosyltransferase C5P03_08940 PF00816 H-NS histone family C5P03_08950 PF03553 Na+/H+ antiporter family C5P03_08955 PF00265 Thymidine kinase C5P03_08965 PF10722 Putative bacterial sensory transduction regulator C5P03_08980 PF01168 Alanine racemase, N-terminal domain C5P03_08980 PF00842 Alanine racemase, C-terminal domain C5P03_08985 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C5P03_08985 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C5P03_08990 PF13247 4Fe-4S dicluster domain C5P03_08995 PF03916 Polysulphide reductase, NrfD C5P03_09000 PF00374 Nickel-dependent hydrogenase C5P03_09005 PF01750 Hydrogenase maturation protease C5P03_09010 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE C5P03_09015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_09020 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_09025 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_09025 PF12911 N-terminal TM domain of oligopeptide transport permease C C5P03_09030 PF00005 ABC transporter C5P03_09035 PF00005 ABC transporter C5P03_09035 PF08402 TOBE domain C5P03_09040 PF02492 CobW/HypB/UreG, nucleotide-binding domain C5P03_09045 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C5P03_09050 PF00586 AIR synthase related protein, N-terminal domain C5P03_09050 PF02769 AIR synthase related protein, C-terminal domain C5P03_09055 PF01924 Hydrogenase formation hypA family C5P03_09060 PF01455 HupF/HypC family C5P03_09065 PF00708 Acylphosphatase C5P03_09065 PF17788 HypF Kae1-like domain C5P03_09065 PF01300 Telomere recombination C5P03_09065 PF07503 HypF finger C5P03_09070 PF09107 Elongation factor SelB, winged helix C5P03_09070 PF03144 Elongation factor Tu domain 2 C5P03_09070 PF09106 Elongation factor SelB, winged helix C5P03_09070 PF00009 Elongation factor Tu GTP binding domain C5P03_09075 PF12390 Selenocysteine synthase N terminal C5P03_09075 PF03841 L-seryl-tRNA selenium transferase C5P03_09080 PF01750 Hydrogenase maturation protease C5P03_09085 PF07450 Formate hydrogenlyase maturation protein HycH C5P03_09090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C5P03_09095 PF12838 4Fe-4S dicluster domain C5P03_09100 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C5P03_09100 PF00374 Nickel-dependent hydrogenase C5P03_09100 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C5P03_09105 PF00146 NADH dehydrogenase C5P03_09110 PF00361 Proton-conducting membrane transporter C5P03_09115 PF12798 4Fe-4S binding domain C5P03_09115 PF00037 4Fe-4S binding domain C5P03_09120 PF02705 K+ potassium transporter C5P03_09135 PF07693 KAP family P-loop domain C5P03_09140 PF12800 4Fe-4S binding domain C5P03_09140 PF13247 4Fe-4S dicluster domain C5P03_09155 PF02954 Bacterial regulatory protein, Fis family C5P03_09155 PF00158 Sigma-54 interaction domain C5P03_09155 PF01590 GAF domain C5P03_09160 PF02634 FdhD/NarQ family C5P03_09165 PF02132 RecR protein C5P03_09165 PF13662 Toprim domain C5P03_09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_09170 PF00183 Hsp90 protein C5P03_09180 PF05191 Adenylate kinase, active site lid C5P03_09185 PF00762 Ferrochelatase C5P03_09190 PF01124 MAPEG family C5P03_09195 PF00294 pfkB family carbohydrate kinase C5P03_09200 PF00672 HAMP domain C5P03_09200 PF17200 Single Cache domain 2 C5P03_09200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_09215 PF03707 Bacterial signalling protein N terminal repeat C5P03_09215 PF00563 EAL domain C5P03_09215 PF00990 Diguanylate cyclase, GGDEF domain C5P03_09220 PF00483 Nucleotidyl transferase C5P03_09230 PF07273 Protein of unknown function (DUF1439) C5P03_09235 PF00425 chorismate binding enzyme C5P03_09240 PF13193 AMP-binding enzyme C-terminal domain C5P03_09240 PF00501 AMP-binding enzyme C5P03_09245 PF00550 Phosphopantetheine attachment site C5P03_09245 PF00857 Isochorismatase family C5P03_09250 PF00501 AMP-binding enzyme C5P03_09250 PF00975 Thioesterase domain C5P03_09250 PF00550 Phosphopantetheine attachment site C5P03_09250 PF00668 Condensation domain C5P03_09250 PF13193 AMP-binding enzyme C-terminal domain C5P03_09260 PF07993 Male sterility protein C5P03_09260 PF13193 AMP-binding enzyme C-terminal domain C5P03_09260 PF00668 Condensation domain C5P03_09260 PF00550 Phosphopantetheine attachment site C5P03_09260 PF00501 AMP-binding enzyme C5P03_09265 PF14765 Polyketide synthase dehydratase C5P03_09265 PF16197 Ketoacyl-synthetase C-terminal extension C5P03_09265 PF02801 Beta-ketoacyl synthase, C-terminal domain C5P03_09265 PF08659 KR domain C5P03_09265 PF00550 Phosphopantetheine attachment site C5P03_09265 PF00668 Condensation domain C5P03_09265 PF13193 AMP-binding enzyme C-terminal domain C5P03_09265 PF00501 AMP-binding enzyme C5P03_09265 PF00109 Beta-ketoacyl synthase, N-terminal domain C5P03_09270 PF01497 Periplasmic binding protein C5P03_09275 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C5P03_09275 PF01648 4'-phosphopantetheinyl transferase superfamily C5P03_09280 PF00005 ABC transporter C5P03_09285 PF01032 FecCD transport family C5P03_09290 PF01032 FecCD transport family C5P03_09295 PF07715 TonB-dependent Receptor Plug Domain C5P03_09295 PF00593 TonB dependent receptor C5P03_09310 PF11143 Protein of unknown function (DUF2919) C5P03_09315 PF01544 CorA-like Mg2+ transporter protein C5P03_09330 PF01012 Electron transfer flavoprotein domain C5P03_09335 PF01012 Electron transfer flavoprotein domain C5P03_09335 PF00766 Electron transfer flavoprotein FAD-binding domain C5P03_09340 PF00266 Aminotransferase class-V C5P03_09345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C5P03_09350 PF00793 DAHP synthetase I family C5P03_09360 PF04055 Radical SAM superfamily C5P03_09365 PF13742 OB-fold nucleic acid binding domain C5P03_09365 PF02601 Exonuclease VII, large subunit C5P03_09370 PF01292 Prokaryotic cytochrome b561 C5P03_09375 PF02472 Biopolymer transport protein ExbD/TolR C5P03_09380 PF01618 MotA/TolQ/ExbB proton channel family C5P03_09390 PF00571 CBS domain C5P03_09390 PF00478 IMP dehydrogenase / GMP reductase domain C5P03_09395 PF02540 NAD synthase C5P03_09395 PF00958 GMP synthase C terminal domain C5P03_09395 PF00117 Glutamine amidotransferase class-I C5P03_09425 PF05724 Thiopurine S-methyltransferase (TPMT) C5P03_09430 PF16187 Middle or third domain of peptidase_M16 C5P03_09430 PF00675 Insulinase (Peptidase family M16) C5P03_09430 PF05193 Peptidase M16 inactive domain C5P03_09435 PF00300 Histidine phosphatase superfamily (branch 1) C5P03_09445 PF00892 EamA-like transporter family C5P03_09450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_09455 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C5P03_09460 PF00270 DEAD/DEAH box helicase C5P03_09460 PF00271 Helicase conserved C-terminal domain C5P03_09460 PF03461 TRCF domain C5P03_09460 PF02559 CarD-like/TRCF domain C5P03_09460 PF17757 UvrB interaction domain C5P03_09470 PF02687 FtsX-like permease family C5P03_09470 PF12704 MacB-like periplasmic core domain C5P03_09475 PF00005 ABC transporter C5P03_09480 PF12704 MacB-like periplasmic core domain C5P03_09480 PF02687 FtsX-like permease family C5P03_09500 PF05698 Bacterial trigger factor protein (TF) C-terminus C5P03_09500 PF05697 Bacterial trigger factor protein (TF) C5P03_09500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5P03_09505 PF00574 Clp protease C5P03_09510 PF10431 C-terminal, D2-small domain, of ClpB protein C5P03_09510 PF07724 AAA domain (Cdc48 subfamily) C5P03_09510 PF06689 ClpX C4-type zinc finger C5P03_09515 PF02190 ATP-dependent protease La (LON) substrate-binding domain C5P03_09515 PF05362 Lon protease (S16) C-terminal proteolytic domain C5P03_09515 PF00004 ATPase family associated with various cellular activities (AAA) C5P03_09520 PF00216 Bacterial DNA-binding protein C5P03_09525 PF13145 PPIC-type PPIASE domain C5P03_09530 PF00005 ABC transporter C5P03_09530 PF12848 ABC transporter C5P03_09535 PF00474 Sodium:solute symporter family C5P03_09540 PF04341 Protein of unknown function, DUF485 C5P03_09555 PF00378 Enoyl-CoA hydratase/isomerase C5P03_09555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C5P03_09555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C5P03_09560 PF01235 Sodium:alanine symporter family C5P03_09565 PF00583 Acetyltransferase (GNAT) family C5P03_09575 PF01184 GPR1/FUN34/yaaH family C5P03_09590 PF00376 MerR family regulatory protein C5P03_09590 PF09278 MerR, DNA binding C5P03_09595 PF00682 HMGL-like C5P03_09600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C5P03_09600 PF00364 Biotin-requiring enzyme C5P03_09600 PF00289 Biotin carboxylase, N-terminal domain C5P03_09600 PF02785 Biotin carboxylase C-terminal domain C5P03_09605 PF00378 Enoyl-CoA hydratase/isomerase C5P03_09610 PF01039 Carboxyl transferase domain C5P03_09615 PF02770 Acyl-CoA dehydrogenase, middle domain C5P03_09615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C5P03_09615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C5P03_09620 PF00171 Aldehyde dehydrogenase family C5P03_09625 PF02770 Acyl-CoA dehydrogenase, middle domain C5P03_09625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C5P03_09625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C5P03_09630 PF00378 Enoyl-CoA hydratase/isomerase C5P03_09635 PF00378 Enoyl-CoA hydratase/isomerase C5P03_09640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C5P03_09640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C5P03_09650 PF13520 Amino acid permease C5P03_09655 PF01925 Sulfite exporter TauE/SafE C5P03_09700 PF08448 PAS fold C5P03_09700 PF00990 Diguanylate cyclase, GGDEF domain C5P03_09705 PF01713 Smr domain C5P03_09710 PF05175 Methyltransferase small domain C5P03_09715 PF01264 Chorismate synthase C5P03_09725 PF00271 Helicase conserved C-terminal domain C5P03_09725 PF00270 DEAD/DEAH box helicase C5P03_09740 PF03222 Tryptophan/tyrosine permease family C5P03_09745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C5P03_09745 PF00356 Bacterial regulatory proteins, lacI family C5P03_09750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C5P03_09750 PF00381 PTS HPr component phosphorylation site C5P03_09755 PF00294 pfkB family carbohydrate kinase C5P03_09760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C5P03_09760 PF02378 Phosphotransferase system, EIIC C5P03_09765 PF06945 Protein of unknown function (DUF1289) C5P03_09770 PF06725 3D domain C5P03_09770 PF03562 MltA specific insert domain C5P03_09775 PF00111 2Fe-2S iron-sulfur cluster binding domain C5P03_09780 PF00268 Ribonucleotide reductase, small chain C5P03_09785 PF02867 Ribonucleotide reductase, barrel domain C5P03_09785 PF03477 ATP cone domain C5P03_09785 PF00317 Ribonucleotide reductase, all-alpha domain C5P03_09790 PF13419 Haloacid dehalogenase-like hydrolase C5P03_09800 PF03989 DNA gyrase C-terminal domain, beta-propeller C5P03_09800 PF00521 DNA gyrase/topoisomerase IV, subunit A C5P03_09805 PF04055 Radical SAM superfamily C5P03_09815 PF03129 Anticodon binding domain C5P03_09815 PF02824 TGS domain C5P03_09815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C5P03_09815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C5P03_09820 PF00707 Translation initiation factor IF-3, C-terminal domain C5P03_09820 PF05198 Translation initiation factor IF-3, N-terminal domain C5P03_09825 PF01632 Ribosomal protein L35 C5P03_09830 PF00453 Ribosomal protein L20 C5P03_09835 PF01409 tRNA synthetases class II core domain (F) C5P03_09835 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C5P03_09840 PF03484 tRNA synthetase B5 domain C5P03_09840 PF01588 Putative tRNA binding domain C5P03_09840 PF03147 Ferredoxin-fold anticodon binding domain C5P03_09840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C5P03_09840 PF03483 B3/4 domain C5P03_09845 PF00216 Bacterial DNA-binding protein C5P03_09865 PF02146 Sir2 family C5P03_09875 PF00990 Diguanylate cyclase, GGDEF domain C5P03_09875 PF17152 Periplasmic sensor domain C5P03_09880 PF00356 Bacterial regulatory proteins, lacI family C5P03_09885 PF00294 pfkB family carbohydrate kinase C5P03_09890 PF13407 Periplasmic binding protein domain C5P03_09895 PF02653 Branched-chain amino acid transport system / permease component C5P03_09905 PF05025 RbsD / FucU transport protein family C5P03_09910 PF02798 Glutathione S-transferase, N-terminal domain C5P03_09910 PF00043 Glutathione S-transferase, C-terminal domain C5P03_09925 PF01171 PP-loop family C5P03_09930 PF00582 Universal stress protein family C5P03_09935 PF00027 Cyclic nucleotide-binding domain C5P03_09935 PF13545 Crp-like helix-turn-helix domain C5P03_09950 PF00403 Heavy-metal-associated domain C5P03_09960 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C5P03_09960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C5P03_09975 PF00115 Cytochrome C and Quinol oxidase polypeptide I C5P03_09985 PF13185 GAF domain C5P03_09990 PF17516 ProQ C-terminal domain C5P03_09990 PF04352 ProQ/FINO family C5P03_09995 PF00595 PDZ domain C5P03_09995 PF11818 C-terminal domain of tail specific protease (DUF3340) C5P03_09995 PF03572 Peptidase family S41 C5P03_09995 PF17804 Tail specific protease N-terminal domain C5P03_10000 PF11940 Domain of unknown function (DUF3458) Ig-like fold C5P03_10000 PF01433 Peptidase family M1 domain C5P03_10000 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C5P03_10010 PF05088 Bacterial NAD-glutamate dehydrogenase C5P03_10015 PF01180 Dihydroorotate dehydrogenase C5P03_10020 PF07126 Cell-division protein ZapC C5P03_10025 PF10672 S-adenosylmethionine-dependent methyltransferase C5P03_10025 PF02926 THUMP domain C5P03_10025 PF01170 Putative RNA methylase family UPF0020 C5P03_10045 PF04957 Ribosome modulation factor C5P03_10050 PF07977 FabA-like domain C5P03_10055 PF13654 AAA domain C5P03_10055 PF05362 Lon protease (S16) C-terminal proteolytic domain C5P03_10065 PF05707 Zonular occludens toxin (Zot) C5P03_10120 PF01695 IstB-like ATP binding protein C5P03_10125 PF00665 Integrase core domain C5P03_10130 PF05707 Zonular occludens toxin (Zot) C5P03_10200 PF00106 short chain dehydrogenase C5P03_10225 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C5P03_10225 PF06974 Protein of unknown function (DUF1298) C5P03_10240 PF03972 MmgE/PrpD family C5P03_10260 PF04403 Paraquat-inducible protein A C5P03_10270 PF01189 16S rRNA methyltransferase RsmB/F C5P03_10270 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C5P03_10270 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C5P03_10285 PF01026 TatD related DNase C5P03_10290 PF09115 DNA polymerase III, delta subunit, C terminal C5P03_10295 PF02223 Thymidylate kinase C5P03_10300 PF02618 YceG-like family C5P03_10305 PF01063 Amino-transferase class IV C5P03_10310 PF00109 Beta-ketoacyl synthase, N-terminal domain C5P03_10310 PF02801 Beta-ketoacyl synthase, C-terminal domain C5P03_10315 PF00550 Phosphopantetheine attachment site C5P03_10325 PF00698 Acyl transferase domain C5P03_10330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C5P03_10330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C5P03_10335 PF02504 Fatty acid synthesis protein C5P03_10340 PF01783 Ribosomal L32p protein family C5P03_10345 PF02620 Large ribosomal RNA subunit accumulation protein YceD C5P03_10350 PF02545 Maf-like protein C5P03_10355 PF13419 Haloacid dehalogenase-like hydrolase C5P03_10360 PF01479 S4 domain C5P03_10360 PF00849 RNA pseudouridylate synthase C5P03_10365 PF00575 S1 RNA binding domain C5P03_10365 PF10150 Ribonuclease E/G family C5P03_10365 PF12111 Polyribonucleotide phosphorylase C terminal C5P03_10375 PF01384 Phosphate transporter family C5P03_10380 PF00692 dUTPase C5P03_10385 PF00485 Phosphoribulokinase / Uridine kinase family C5P03_10390 PF10609 NUBPL iron-transfer P-loop NTPase C5P03_10395 PF08264 Anticodon-binding domain of tRNA C5P03_10395 PF01588 Putative tRNA binding domain C5P03_10395 PF09334 tRNA synthetases class I (M) C5P03_10405 PF00708 Acylphosphatase C5P03_10410 PF00672 HAMP domain C5P03_10410 PF12729 Four helix bundle sensory module for signal transduction C5P03_10410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_10415 PF17785 PUA-like domain C5P03_10415 PF10672 S-adenosylmethionine-dependent methyltransferase C5P03_10430 PF02769 AIR synthase related protein, C-terminal domain C5P03_10430 PF00586 AIR synthase related protein, N-terminal domain C5P03_10440 PF00753 Metallo-beta-lactamase superfamily C5P03_10445 PF01386 Ribosomal L25p family C5P03_10455 PF00271 Helicase conserved C-terminal domain C5P03_10455 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C5P03_10455 PF04408 Helicase associated domain (HA2) C5P03_10455 PF00270 DEAD/DEAH box helicase C5P03_10455 PF11898 Domain of unknown function (DUF3418) C5P03_10465 PF00196 Bacterial regulatory proteins, luxR family C5P03_10465 PF00072 Response regulator receiver domain C5P03_10475 PF02575 YbaB/EbfC DNA-binding family C5P03_10480 PF12169 DNA polymerase III subunits gamma and tau domain III C5P03_10480 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C5P03_10480 PF12170 DNA polymerase III tau subunit V interacting with alpha C5P03_10485 PF00156 Phosphoribosyl transferase domain C5P03_10490 PF04304 Protein of unknown function (DUF454) C5P03_10495 PF01207 Dihydrouridine synthase (Dus) C5P03_10510 PF00570 HRDC domain C5P03_10510 PF01612 3'-5' exonuclease C5P03_10515 PF13193 AMP-binding enzyme C-terminal domain C5P03_10515 PF00501 AMP-binding enzyme C5P03_10520 PF12697 Alpha/beta hydrolase family C5P03_10530 PF00814 Glycoprotease family C5P03_10535 PF13307 Helicase C-terminal domain C5P03_10535 PF04851 Type III restriction enzyme, res subunit C5P03_10545 PF01634 ATP phosphoribosyltransferase C5P03_10545 PF08029 HisG, C-terminal domain C5P03_10550 PF00815 Histidinol dehydrogenase C5P03_10555 PF00155 Aminotransferase class I and II C5P03_10560 PF08645 Polynucleotide kinase 3 phosphatase C5P03_10560 PF00475 Imidazoleglycerol-phosphate dehydratase C5P03_10565 PF00117 Glutamine amidotransferase class-I C5P03_10570 PF00977 Histidine biosynthesis protein C5P03_10575 PF00072 Response regulator receiver domain C5P03_10585 PF00512 His Kinase A (phospho-acceptor) domain C5P03_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_10585 PF01627 Hpt domain C5P03_10585 PF00072 Response regulator receiver domain C5P03_10590 PF00977 Histidine biosynthesis protein C5P03_10595 PF01502 Phosphoribosyl-AMP cyclohydrolase C5P03_10595 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C5P03_10605 PF13280 WYL domain C5P03_10605 PF08279 HTH domain C5P03_10610 PF00501 AMP-binding enzyme C5P03_10610 PF13193 AMP-binding enzyme C-terminal domain C5P03_10635 PF01338 Bacillus thuringiensis toxin C5P03_10665 PF04972 BON domain C5P03_10670 PF01590 GAF domain C5P03_10670 PF00360 Phytochrome region C5P03_10670 PF00990 Diguanylate cyclase, GGDEF domain C5P03_10670 PF00563 EAL domain C5P03_10675 PF02653 Branched-chain amino acid transport system / permease component C5P03_10685 PF00005 ABC transporter C5P03_10690 PF13407 Periplasmic binding protein domain C5P03_10705 PF00704 Glycosyl hydrolases family 18 C5P03_10705 PF08329 Chitinase A, N-terminal domain C5P03_10715 PF03831 PhnA domain C5P03_10715 PF08274 PhnA Zinc-Ribbon C5P03_10720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C5P03_10720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C5P03_10720 PF00378 Enoyl-CoA hydratase/isomerase C5P03_10725 PF00108 Thiolase, N-terminal domain C5P03_10725 PF02803 Thiolase, C-terminal domain C5P03_10730 PF07726 ATPase family associated with various cellular activities (AAA) C5P03_10730 PF17863 AAA lid domain C5P03_10735 PF01882 Protein of unknown function DUF58 C5P03_10745 PF17863 AAA lid domain C5P03_10745 PF13519 von Willebrand factor type A domain C5P03_10745 PF07728 AAA domain (dynein-related subfamily) C5P03_10760 PF04545 Sigma-70, region 4 C5P03_10760 PF04542 Sigma-70 region 2 C5P03_10770 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C5P03_10775 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C5P03_10780 PF08668 HDOD domain C5P03_10780 PF00563 EAL domain C5P03_10785 PF02803 Thiolase, C-terminal domain C5P03_10785 PF00108 Thiolase, N-terminal domain C5P03_10790 PF00376 MerR family regulatory protein C5P03_10790 PF09278 MerR, DNA binding C5P03_10795 PF00375 Sodium:dicarboxylate symporter family C5P03_10800 PF06865 Pyrimidine/purine nucleoside phosphorylase C5P03_10805 PF03313 Serine dehydratase alpha chain C5P03_10805 PF03315 Serine dehydratase beta chain C5P03_10815 PF03315 Serine dehydratase beta chain C5P03_10815 PF03313 Serine dehydratase alpha chain C5P03_10820 PF13406 Transglycosylase SLT domain C5P03_10825 PF05166 YcgL domain C5P03_10830 PF05209 Septum formation inhibitor MinC, N-terminal domain C5P03_10830 PF03775 Septum formation inhibitor MinC, C-terminal domain C5P03_10835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C5P03_10840 PF03776 Septum formation topological specificity factor MinE C5P03_10845 PF04269 Protein of unknown function, DUF440 C5P03_10850 PF00912 Transglycosylase C5P03_10855 PF04269 Protein of unknown function, DUF440 C5P03_10865 PF17783 CvfB-like winged helix domain C5P03_10865 PF13509 S1 domain C5P03_10890 PF02525 Flavodoxin-like fold C5P03_10895 PF00892 EamA-like transporter family C5P03_10900 PF02222 ATP-grasp domain C5P03_10905 PF13419 Haloacid dehalogenase-like hydrolase C5P03_10915 PF00677 Lumazine binding domain C5P03_10920 PF06786 Uncharacterised protein family (UPF0253) C5P03_10925 PF01554 MatE C5P03_10950 PF00136 DNA polymerase family B C5P03_10950 PF03104 DNA polymerase family B, exonuclease domain C5P03_10975 PF03279 Bacterial lipid A biosynthesis acyltransferase C5P03_10980 PF03279 Bacterial lipid A biosynthesis acyltransferase C5P03_10990 PF03466 LysR substrate binding domain C5P03_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_10995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C5P03_10995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C5P03_11000 PF01261 Xylose isomerase-like TIM barrel C5P03_11005 PF03466 LysR substrate binding domain C5P03_11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_11030 PF05433 Glycine zipper 2TM domain C5P03_11050 PF01032 FecCD transport family C5P03_11055 PF00005 ABC transporter C5P03_11060 PF07690 Major Facilitator Superfamily C5P03_11070 PF07152 YaeQ protein C5P03_11140 PF03330 Lytic transglycolase C5P03_11140 PF05036 Sporulation related domain C5P03_11145 PF04310 MukB N-terminal C5P03_11145 PF16330 MukB hinge domain C5P03_11150 PF04288 MukE-like family C5P03_11155 PF03882 MukF winged-helix domain C5P03_11155 PF17192 MukF middle domain C5P03_11155 PF17193 MukF C-terminal domain C5P03_11165 PF02698 DUF218 domain C5P03_11170 PF00121 Triosephosphate isomerase C5P03_11175 PF00365 Phosphofructokinase C5P03_11220 PF13419 Haloacid dehalogenase-like hydrolase C5P03_11225 PF00883 Cytosol aminopeptidase family, catalytic domain C5P03_11225 PF02789 Cytosol aminopeptidase family, N-terminal domain C5P03_11280 PF11398 Protein of unknown function (DUF2813) C5P03_11285 PF14525 AraC-binding-like domain C5P03_11285 PF12833 Helix-turn-helix domain C5P03_11295 PF03466 LysR substrate binding domain C5P03_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_11300 PF01925 Sulfite exporter TauE/SafE C5P03_11315 PF01820 D-ala D-ala ligase N-terminus C5P03_11315 PF07478 D-ala D-ala ligase C-terminus C5P03_11325 PF00255 Glutathione peroxidase C5P03_11330 PF00271 Helicase conserved C-terminal domain C5P03_11330 PF00270 DEAD/DEAH box helicase C5P03_11335 PF13673 Acetyltransferase (GNAT) domain C5P03_11345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C5P03_11355 PF01928 CYTH domain C5P03_11375 PF00465 Iron-containing alcohol dehydrogenase C5P03_11380 PF03992 Antibiotic biosynthesis monooxygenase C5P03_11385 PF08543 Phosphomethylpyrimidine kinase C5P03_11405 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C5P03_11405 PF00561 alpha/beta hydrolase fold C5P03_11410 PF01575 MaoC like domain C5P03_11425 PF00005 ABC transporter C5P03_11425 PF00664 ABC transporter transmembrane region C5P03_11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_11435 PF00512 His Kinase A (phospho-acceptor) domain C5P03_11435 PF01627 Hpt domain C5P03_11435 PF00072 Response regulator receiver domain C5P03_11435 PF00672 HAMP domain C5P03_11435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C5P03_11440 PF00085 Thioredoxin C5P03_11445 PF00939 Sodium:sulfate symporter transmembrane region C5P03_11450 PF00343 Carbohydrate phosphorylase C5P03_11480 PF00425 chorismate binding enzyme C5P03_11480 PF04715 Anthranilate synthase component I, N terminal region C5P03_11485 PF00293 NUDIX domain C5P03_11490 PF03222 Tryptophan/tyrosine permease family C5P03_11495 PF00375 Sodium:dicarboxylate symporter family C5P03_11500 PF00271 Helicase conserved C-terminal domain C5P03_11500 PF00270 DEAD/DEAH box helicase C5P03_11500 PF16124 RecQ zinc-binding C5P03_11500 PF00570 HRDC domain C5P03_11500 PF09382 RQC domain C5P03_11505 PF08298 PrkA AAA domain C5P03_11505 PF06798 PrkA serine protein kinase C-terminal domain C5P03_11510 PF04285 Protein of unknown function (DUF444) C5P03_11515 PF04293 SpoVR like protein C5P03_11520 PF00392 Bacterial regulatory proteins, gntR family C5P03_11520 PF07840 FadR C-terminal domain C5P03_11525 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C5P03_11530 PF02600 Disulfide bond formation protein DsbB C5P03_11535 PF09335 SNARE associated Golgi protein C5P03_11545 PF02151 UvrB/uvrC motif C5P03_11545 PF04851 Type III restriction enzyme, res subunit C5P03_11545 PF12344 Ultra-violet resistance protein B C5P03_11545 PF17757 UvrB interaction domain C5P03_11545 PF00271 Helicase conserved C-terminal domain C5P03_11560 PF06826 Predicted Permease Membrane Region C5P03_11560 PF02080 TrkA-C domain C5P03_11565 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_11565 PF01464 Transglycosylase SLT domain C5P03_11580 PF01970 Tripartite tricarboxylate transporter TctA family C5P03_11585 PF12431 Transcriptional regulator C5P03_11585 PF00072 Response regulator receiver domain C5P03_11585 PF08279 HTH domain C5P03_11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_11590 PF00989 PAS fold C5P03_11590 PF17203 Single cache domain 3 C5P03_11590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C5P03_11595 PF00480 ROK family C5P03_11595 PF01047 MarR family C5P03_11600 PF17200 Single Cache domain 2 C5P03_11600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_11600 PF00672 HAMP domain C5P03_11605 PF02810 SEC-C motif C5P03_11610 PF04324 BFD-like [2Fe-2S] binding domain C5P03_11610 PF01266 FAD dependent oxidoreductase C5P03_11615 PF00890 FAD binding domain C5P03_11620 PF02754 Cysteine-rich domain C5P03_11620 PF13183 4Fe-4S dicluster domain C5P03_11625 PF02335 Cytochrome c552 C5P03_11630 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C5P03_11630 PF13435 Cytochrome c554 and c-prime C5P03_11635 PF13247 4Fe-4S dicluster domain C5P03_11635 PF00037 4Fe-4S binding domain C5P03_11640 PF03916 Polysulphide reductase, NrfD C5P03_11645 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C5P03_11645 PF01578 Cytochrome C assembly protein C5P03_11650 PF08534 Redoxin C5P03_11655 PF03918 Cytochrome C biogenesis protein C5P03_11665 PF00768 D-alanyl-D-alanine carboxypeptidase C5P03_11670 PF01212 Beta-eliminating lyase C5P03_11680 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C5P03_11685 PF01266 FAD dependent oxidoreductase C5P03_11695 PF07969 Amidohydrolase family C5P03_11710 PF01717 Cobalamin-independent synthase, Catalytic domain C5P03_11710 PF08267 Cobalamin-independent synthase, N-terminal domain C5P03_11715 PF03466 LysR substrate binding domain C5P03_11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_11725 PF07715 TonB-dependent Receptor Plug Domain C5P03_11725 PF00593 TonB dependent receptor C5P03_11730 PF12833 Helix-turn-helix domain C5P03_11730 PF06445 GyrI-like small molecule binding domain C5P03_11735 PF00106 short chain dehydrogenase C5P03_11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_11740 PF03466 LysR substrate binding domain C5P03_11745 PF13460 NAD(P)H-binding C5P03_11755 PF01053 Cys/Met metabolism PLP-dependent enzyme C5P03_11760 PF05193 Peptidase M16 inactive domain C5P03_11760 PF00675 Insulinase (Peptidase family M16) C5P03_11765 PF02774 Semialdehyde dehydrogenase, dimerisation domain C5P03_11765 PF01118 Semialdehyde dehydrogenase, NAD binding domain C5P03_11770 PF18381 YcaO cyclodehydratase C-terminal domain C5P03_11770 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C5P03_11775 PF01226 Formate/nitrite transporter C5P03_11780 PF01228 Glycine radical C5P03_11780 PF02901 Pyruvate formate lyase-like C5P03_11785 PF03692 Putative zinc- or iron-chelating domain C5P03_11790 PF02629 CoA binding domain C5P03_11790 PF00549 CoA-ligase C5P03_11795 PF00549 CoA-ligase C5P03_11795 PF08442 ATP-grasp domain C5P03_11800 PF02817 e3 binding domain C5P03_11800 PF00364 Biotin-requiring enzyme C5P03_11800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C5P03_11805 PF16078 2-oxoglutarate dehydrogenase N-terminus C5P03_11805 PF02779 Transketolase, pyrimidine binding domain C5P03_11805 PF00676 Dehydrogenase E1 component C5P03_11805 PF16870 2-oxoglutarate dehydrogenase C-terminal C5P03_11810 PF13085 2Fe-2S iron-sulfur cluster binding domain C5P03_11815 PF00890 FAD binding domain C5P03_11815 PF02910 Fumarate reductase flavoprotein C-term C5P03_11820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C5P03_11825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C5P03_11830 PF00285 Citrate synthase, C-terminal domain C5P03_11845 PF00109 Beta-ketoacyl synthase, N-terminal domain C5P03_11845 PF02801 Beta-ketoacyl synthase, C-terminal domain C5P03_11850 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C5P03_11850 PF01266 FAD dependent oxidoreductase C5P03_11860 PF03606 C4-dicarboxylate anaerobic carrier C5P03_11875 PF01863 Protein of unknown function DUF45 C5P03_11890 PF01197 Ribosomal protein L31 C5P03_11895 PF00444 Ribosomal protein L36 C5P03_11900 PF00224 Pyruvate kinase, barrel domain C5P03_11900 PF02887 Pyruvate kinase, alpha/beta domain C5P03_11905 PF00367 phosphotransferase system, EIIB C5P03_11905 PF02378 Phosphotransferase system, EIIC C5P03_11910 PF08532 Beta-galactosidase trimerisation domain C5P03_11910 PF08533 Beta-galactosidase C-terminal domain C5P03_11910 PF02449 Beta-galactosidase C5P03_11915 PF07745 Glycosyl hydrolase family 53 C5P03_11920 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_11925 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_11930 PF13416 Bacterial extracellular solute-binding protein C5P03_11950 PF12729 Four helix bundle sensory module for signal transduction C5P03_11950 PF00672 HAMP domain C5P03_11950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_11960 PF07745 Glycosyl hydrolase family 53 C5P03_11965 PF07745 Glycosyl hydrolase family 53 C5P03_11970 PF02264 LamB porin C5P03_11980 PF00356 Bacterial regulatory proteins, lacI family C5P03_11985 PF16363 GDP-mannose 4,6 dehydratase C5P03_11990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C5P03_11990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C5P03_11995 PF08544 GHMP kinases C terminal C5P03_11995 PF00288 GHMP kinases N terminal domain C5P03_11995 PF10509 Galactokinase galactose-binding signature C5P03_12000 PF02311 AraC-like ligand binding domain C5P03_12000 PF12833 Helix-turn-helix domain C5P03_12005 PF02653 Branched-chain amino acid transport system / permease component C5P03_12010 PF00005 ABC transporter C5P03_12015 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C5P03_12020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C5P03_12025 PF00596 Class II Aldolase and Adducin N-terminal domain C5P03_12030 PF02610 L-arabinose isomerase C5P03_12030 PF11762 L-arabinose isomerase C-terminal domain C5P03_12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_12035 PF03466 LysR substrate binding domain C5P03_12045 PF00795 Carbon-nitrogen hydrolase C5P03_12050 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_12060 PF08411 Exonuclease C-terminal C5P03_12060 PF00929 Exonuclease C5P03_12075 PF03788 LrgA family C5P03_12080 PF04172 LrgB-like family C5P03_12085 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C5P03_12085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C5P03_12090 PF00501 AMP-binding enzyme C5P03_12095 PF08891 YfcL protein C5P03_12105 PF03741 Integral membrane protein TerC family C5P03_12110 PF00691 OmpA family C5P03_12115 PF17152 Periplasmic sensor domain C5P03_12115 PF00990 Diguanylate cyclase, GGDEF domain C5P03_12120 PF13689 YfiR/HmsC-like C5P03_12125 PF00158 Sigma-54 interaction domain C5P03_12125 PF18024 Helix-turn-helix domain C5P03_12130 PF01329 Pterin 4 alpha carbinolamine dehydratase C5P03_12135 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C5P03_12140 PF05128 Domain of unknown function (DUF697) C5P03_12145 PF04317 YcjX-like family, DUF463 C5P03_12155 PF06667 Phage shock protein B C5P03_12160 PF04012 PspA/IM30 family C5P03_12165 PF02954 Bacterial regulatory protein, Fis family C5P03_12165 PF00158 Sigma-54 interaction domain C5P03_12170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_12175 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_12180 PF12911 N-terminal TM domain of oligopeptide transport permease C C5P03_12180 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_12185 PF00005 ABC transporter C5P03_12185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5P03_12190 PF00005 ABC transporter C5P03_12200 PF00156 Phosphoribosyl transferase domain C5P03_12205 PF02674 Colicin V production protein C5P03_12210 PF02403 Seryl-tRNA synthetase N-terminal domain C5P03_12210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C5P03_12215 PF12002 MgsA AAA+ ATPase C terminal C5P03_12215 PF00004 ATPase family associated with various cellular activities (AAA) C5P03_12215 PF16193 AAA C-terminal domain C5P03_12220 PF03548 Outer membrane lipoprotein carrier protein LolA C5P03_12225 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C5P03_12225 PF17854 FtsK alpha domain C5P03_12225 PF01580 FtsK/SpoIIIE family C5P03_12225 PF09397 Ftsk gamma domain C5P03_12230 PF01037 Lrp/AsnC ligand binding domain C5P03_12240 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_12245 PF17158 Membrane-associated sensor, integral membrane domain C5P03_12245 PF00990 Diguanylate cyclase, GGDEF domain C5P03_12250 PF05433 Glycine zipper 2TM domain C5P03_12255 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C5P03_12260 PF04377 Arginine-tRNA-protein transferase, C terminus C5P03_12260 PF04376 Arginine-tRNA-protein transferase, N terminus C5P03_12265 PF01176 Translation initiation factor 1A / IF-1 C5P03_12270 PF07724 AAA domain (Cdc48 subfamily) C5P03_12270 PF10431 C-terminal, D2-small domain, of ClpB protein C5P03_12270 PF02861 Clp amino terminal domain, pathogenicity island component C5P03_12270 PF17871 AAA lid domain C5P03_12270 PF00004 ATPase family associated with various cellular activities (AAA) C5P03_12275 PF02617 ATP-dependent Clp protease adaptor protein ClpS C5P03_12280 PF00313 'Cold-shock' DNA-binding domain C5P03_12285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C5P03_12285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C5P03_12345 PF00158 Sigma-54 interaction domain C5P03_12345 PF06505 Activator of aromatic catabolism C5P03_12345 PF02830 V4R domain C5P03_12345 PF02954 Bacterial regulatory protein, Fis family C5P03_12350 PF00004 ATPase family associated with various cellular activities (AAA) C5P03_12350 PF17871 AAA lid domain C5P03_12350 PF07724 AAA domain (Cdc48 subfamily) C5P03_12350 PF10431 C-terminal, D2-small domain, of ClpB protein C5P03_12420 PF01740 STAS domain C5P03_12420 PF00916 Sulfate permease family C5P03_12460 PF00892 EamA-like transporter family C5P03_12465 PF02508 Rnf-Nqr subunit, membrane protein C5P03_12470 PF04060 Putative Fe-S cluster C5P03_12475 PF13375 RnfC Barrel sandwich hybrid domain C5P03_12475 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C5P03_12475 PF12838 4Fe-4S dicluster domain C5P03_12475 PF10531 SLBB domain C5P03_12480 PF03116 NQR2, RnfD, RnfE family C5P03_12485 PF04205 FMN-binding domain C5P03_12490 PF02508 Rnf-Nqr subunit, membrane protein C5P03_12495 PF00730 HhH-GPD superfamily base excision DNA repair protein C5P03_12495 PF10576 Iron-sulfur binding domain of endonuclease III C5P03_12495 PF00633 Helix-hairpin-helix motif C5P03_12500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C5P03_12505 PF18393 MotY N-terminal domain C5P03_12505 PF00691 OmpA family C5P03_12510 PF12729 Four helix bundle sensory module for signal transduction C5P03_12510 PF00672 HAMP domain C5P03_12510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_12515 PF00929 Exonuclease C5P03_12520 PF13726 Na+-H+ antiporter family C5P03_12520 PF03553 Na+/H+ antiporter family C5P03_12525 PF13188 PAS domain C5P03_12525 PF00563 EAL domain C5P03_12525 PF00990 Diguanylate cyclase, GGDEF domain C5P03_12525 PF03707 Bacterial signalling protein N terminal repeat C5P03_12535 PF00270 DEAD/DEAH box helicase C5P03_12535 PF03880 DbpA RNA binding domain C5P03_12535 PF00271 Helicase conserved C-terminal domain C5P03_12540 PF03061 Thioesterase superfamily C5P03_12550 PF13183 4Fe-4S dicluster domain C5P03_12550 PF01565 FAD binding domain C5P03_12550 PF02913 FAD linked oxidases, C-terminal domain C5P03_12560 PF03471 Transporter associated domain C5P03_12560 PF03741 Integral membrane protein TerC family C5P03_12565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C5P03_12570 PF00962 Adenosine/AMP deaminase C5P03_12575 PF13344 Haloacid dehalogenase-like hydrolase C5P03_12580 PF02254 TrkA-N domain C5P03_12580 PF00999 Sodium/hydrogen exchanger family C5P03_12590 PF13537 Glutamine amidotransferase domain C5P03_12590 PF00733 Asparagine synthase C5P03_12595 PF03577 Peptidase family C69 C5P03_12610 PF13417 Glutathione S-transferase, N-terminal domain C5P03_12610 PF00043 Glutathione S-transferase, C-terminal domain C5P03_12615 PF02798 Glutathione S-transferase, N-terminal domain C5P03_12615 PF14497 Glutathione S-transferase, C-terminal domain C5P03_12630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C5P03_12640 PF00849 RNA pseudouridylate synthase C5P03_12650 PF08447 PAS fold C5P03_12650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_12660 PF01027 Inhibitor of apoptosis-promoting Bax1 C5P03_12665 PF12805 FUSC-like inner membrane protein yccS C5P03_12670 PF04358 DsrC like protein C5P03_12675 PF05036 Sporulation related domain C5P03_12680 PF02875 Mur ligase family, glutamate ligase domain C5P03_12680 PF08245 Mur ligase middle domain C5P03_12685 PF17848 Acetyl-coA carboxylase zinc finger domain C5P03_12685 PF01039 Carboxyl transferase domain C5P03_12690 PF01416 tRNA pseudouridine synthase C5P03_12700 PF02774 Semialdehyde dehydrogenase, dimerisation domain C5P03_12700 PF01118 Semialdehyde dehydrogenase, NAD binding domain C5P03_12705 PF11890 Domain of unknown function (DUF3410) C5P03_12705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5P03_12705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C5P03_12710 PF01569 PAP2 superfamily C5P03_12715 PF03180 NLPA lipoprotein C5P03_12735 PF00082 Subtilase family C5P03_12735 PF01483 Proprotein convertase P-domain C5P03_12745 PF14310 Fibronectin type III-like domain C5P03_12745 PF00933 Glycosyl hydrolase family 3 N terminal domain C5P03_12745 PF01915 Glycosyl hydrolase family 3 C-terminal domain C5P03_12755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C5P03_12755 PF02896 PEP-utilising enzyme, TIM barrel domain C5P03_12755 PF00391 PEP-utilising enzyme, mobile domain C5P03_12760 PF03618 Kinase/pyrophosphorylase C5P03_12770 PF00324 Amino acid permease C5P03_12800 PF03239 Iron permease FTR1 family C5P03_12805 PF01593 Flavin containing amine oxidoreductase C5P03_12830 PF03600 Citrate transporter C5P03_12860 PF02308 MgtC family C5P03_12905 PF01625 Peptide methionine sulfoxide reductase C5P03_12910 PF00696 Amino acid kinase family C5P03_12910 PF00583 Acetyltransferase (GNAT) family C5P03_12915 PF00696 Amino acid kinase family C5P03_12915 PF01842 ACT domain C5P03_12925 PF00884 Sulfatase C5P03_12930 PF17676 LD-carboxypeptidase C-terminal domain C5P03_12930 PF02016 LD-carboxypeptidase N-terminal domain C5P03_12940 PF01906 Putative heavy-metal-binding C5P03_12945 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_12950 PF05728 Uncharacterised protein family (UPF0227) C5P03_12955 PF01432 Peptidase family M3 C5P03_12955 PF08439 Oligopeptidase F C5P03_12965 PF05661 Protein of unknown function (DUF808) C5P03_12975 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C5P03_12975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C5P03_12975 PF02769 AIR synthase related protein, C-terminal domain C5P03_12980 PF01464 Transglycosylase SLT domain C5P03_12980 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_12985 PF07191 zinc-ribbons C5P03_12990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C5P03_12990 PF01926 50S ribosome-binding GTPase C5P03_12995 PF13360 PQQ-like domain C5P03_13000 PF09976 Tetratricopeptide repeat-like domain C5P03_13005 PF03129 Anticodon binding domain C5P03_13005 PF13393 Histidyl-tRNA synthetase C5P03_13010 PF04551 GcpE protein C5P03_13015 PF13464 Domain of unknown function (DUF4115) C5P03_13025 PF04055 Radical SAM superfamily C5P03_13030 PF00334 Nucleoside diphosphate kinase C5P03_13035 PF00883 Cytosol aminopeptidase family, catalytic domain C5P03_13035 PF12404 Peptidase C5P03_13040 PF00883 Cytosol aminopeptidase family, catalytic domain C5P03_13040 PF12404 Peptidase C5P03_13045 PF00111 2Fe-2S iron-sulfur cluster binding domain C5P03_13050 PF00012 Hsp70 protein C5P03_13055 PF07743 HSCB C-terminal oligomerisation domain C5P03_13055 PF00226 DnaJ domain C5P03_13060 PF01521 Iron-sulphur cluster biosynthesis C5P03_13065 PF01592 NifU-like N terminal domain C5P03_13070 PF00266 Aminotransferase class-V C5P03_13075 PF02082 Transcriptional regulator C5P03_13080 PF00588 SpoU rRNA Methylase family C5P03_13105 PF13181 Tetratricopeptide repeat C5P03_13105 PF07719 Tetratricopeptide repeat C5P03_13110 PF00581 Rhodanese-like domain C5P03_13115 PF07549 SecD/SecF GG Motif C5P03_13115 PF02355 Protein export membrane protein C5P03_13120 PF02355 Protein export membrane protein C5P03_13120 PF13721 SecD export protein N-terminal TM region C5P03_13120 PF07549 SecD/SecF GG Motif C5P03_13125 PF02699 Preprotein translocase subunit C5P03_13130 PF01702 Queuine tRNA-ribosyltransferase C5P03_13135 PF02547 Queuosine biosynthesis protein C5P03_13140 PF00571 CBS domain C5P03_13145 PF10417 C-terminal domain of 1-Cys peroxiredoxin C5P03_13145 PF00578 AhpC/TSA family C5P03_13150 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_13150 PF13192 Thioredoxin domain C5P03_13155 PF07690 Major Facilitator Superfamily C5P03_13165 PF02347 Glycine cleavage system P-protein C5P03_13170 PF01597 Glycine cleavage H-protein C5P03_13175 PF01571 Aminomethyltransferase folate-binding domain C5P03_13175 PF08669 Glycine cleavage T-protein C-terminal barrel domain C5P03_13180 PF01494 FAD binding domain C5P03_13185 PF01494 FAD binding domain C5P03_13190 PF03695 Uncharacterised protein family (UPF0149) C5P03_13195 PF05164 Cell division protein ZapA C5P03_13210 PF02634 FdhD/NarQ family C5P03_13215 PF03466 LysR substrate binding domain C5P03_13215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_13220 PF07690 Major Facilitator Superfamily C5P03_13225 PF00005 ABC transporter C5P03_13230 PF12911 N-terminal TM domain of oligopeptide transport permease C C5P03_13230 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_13235 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_13245 PF02798 Glutathione S-transferase, N-terminal domain C5P03_13245 PF00043 Glutathione S-transferase, C-terminal domain C5P03_13255 PF00459 Inositol monophosphatase family C5P03_13260 PF00672 HAMP domain C5P03_13260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_13265 PF02535 ZIP Zinc transporter C5P03_13275 PF01048 Phosphorylase superfamily C5P03_13285 PF01497 Periplasmic binding protein C5P03_13300 PF02561 Flagellar protein FliS C5P03_13305 PF07196 Flagellin hook IN motif C5P03_13305 PF07195 Flagellar hook-associated protein 2 C-terminus C5P03_13305 PF02465 Flagellar hook-associated protein 2 N-terminus C5P03_13315 PF00700 Bacterial flagellin C-terminal helical region C5P03_13315 PF00669 Bacterial flagellin N-terminal helical region C5P03_13320 PF07196 Flagellin hook IN motif C5P03_13320 PF00669 Bacterial flagellin N-terminal helical region C5P03_13320 PF00700 Bacterial flagellin C-terminal helical region C5P03_13325 PF03458 UPF0126 domain C5P03_13335 PF02568 Thiamine biosynthesis protein (ThiI) C5P03_13335 PF02926 THUMP domain C5P03_13490 PF05772 NinB protein C5P03_13520 PF00145 C-5 cytosine-specific DNA methylase C5P03_13590 PF06630 Enterobacterial exodeoxyribonuclease VIII C5P03_13590 PF12684 PDDEXK-like domain of unknown function (DUF3799) C5P03_13625 PF04381 Putative exonuclease, RdgC C5P03_13675 PF12167 Arm DNA-binding domain C5P03_13675 PF00589 Phage integrase family C5P03_13685 PF00905 Penicillin binding protein transpeptidase domain C5P03_13685 PF06832 Penicillin-Binding Protein C-terminus Family C5P03_13685 PF00912 Transglycosylase C5P03_13690 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C5P03_13690 PF00207 Alpha-2-macroglobulin family C5P03_13690 PF07678 A-macroglobulin TED domain C5P03_13690 PF07703 Alpha-2-macroglobulin bait region domain C5P03_13690 PF01835 MG2 domain C5P03_13690 PF17962 Bacterial macroglobulin domain 6 C5P03_13690 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C5P03_13690 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C5P03_13690 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C5P03_13700 PF03707 Bacterial signalling protein N terminal repeat C5P03_13700 PF00563 EAL domain C5P03_13700 PF00990 Diguanylate cyclase, GGDEF domain C5P03_13705 PF04055 Radical SAM superfamily C5P03_13720 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_13725 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_13730 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_13735 PF00005 ABC transporter C5P03_13740 PF03956 Lysine exporter LysO C5P03_13745 PF04336 Acyl carrier protein phosphodiesterase C5P03_13755 PF03960 ArsC family C5P03_13765 PF07720 Tetratricopeptide repeat C5P03_13765 PF01435 Peptidase family M48 C5P03_13770 PF01206 Sulfurtransferase TusA C5P03_13775 PF01594 AI-2E family transporter C5P03_13780 PF00561 alpha/beta hydrolase fold C5P03_13785 PF03976 Polyphosphate kinase 2 (PPK2) C5P03_13790 PF08402 TOBE domain C5P03_13790 PF00005 ABC transporter C5P03_13795 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_13800 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_13800 PF14785 Maltose transport system permease protein MalF P2 domain C5P03_13805 PF01547 Bacterial extracellular solute-binding protein C5P03_13810 PF04245 37-kD nucleoid-associated bacterial protein C5P03_13815 PF07208 Protein of unknown function (DUF1414) C5P03_13820 PF00884 Sulfatase C5P03_13820 PF11893 Domain of unknown function (DUF3413) C5P03_13825 PF00593 TonB dependent receptor C5P03_13825 PF07715 TonB-dependent Receptor Plug Domain C5P03_13830 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C5P03_13830 PF00326 Prolyl oligopeptidase family C5P03_13850 PF03974 Ecotin C5P03_13855 PF04219 Protein of unknown function, DUF C5P03_13860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_13860 PF03466 LysR substrate binding domain C5P03_13865 PF02153 Prephenate dehydrogenase C5P03_13865 PF01817 Chorismate mutase type II C5P03_13870 PF00793 DAHP synthetase I family C5P03_13875 PF03009 Glycerophosphoryl diester phosphodiesterase family C5P03_13880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C5P03_13880 PF01266 FAD dependent oxidoreductase C5P03_13890 PF08220 DeoR-like helix-turn-helix domain C5P03_13890 PF00455 DeoR C terminal sensor domain C5P03_13895 PF07690 Major Facilitator Superfamily C5P03_13900 PF00230 Major intrinsic protein C5P03_13905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C5P03_13905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C5P03_13910 PF03466 LysR substrate binding domain C5P03_13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_13935 PF03992 Antibiotic biosynthesis monooxygenase C5P03_13940 PF00248 Aldo/keto reductase family C5P03_13945 PF07690 Major Facilitator Superfamily C5P03_13955 PF02322 Cytochrome bd terminal oxidase subunit II C5P03_13960 PF01654 Cytochrome bd terminal oxidase subunit I C5P03_13965 PF00155 Aminotransferase class I and II C5P03_13965 PF00392 Bacterial regulatory proteins, gntR family C5P03_13970 PF04391 Protein of unknown function (DUF533) C5P03_13980 PF10689 Protein of unknown function (DUF2496) C5P03_13990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_13990 PF03466 LysR substrate binding domain C5P03_14000 PF07690 Major Facilitator Superfamily C5P03_14005 PF01479 S4 domain C5P03_14005 PF00849 RNA pseudouridylate synthase C5P03_14010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C5P03_14010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C5P03_14020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C5P03_14035 PF00300 Histidine phosphatase superfamily (branch 1) C5P03_14050 PF17944 Arginine decarboxylase C-terminal helical extension C5P03_14050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C5P03_14050 PF17810 Arginine decarboxylase helical bundle domain C5P03_14060 PF07687 Peptidase dimerisation domain C5P03_14060 PF01546 Peptidase family M20/M25/M40 C5P03_14085 PF04264 YceI-like domain C5P03_14090 PF03466 LysR substrate binding domain C5P03_14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_14100 PF01268 Formate--tetrahydrofolate ligase C5P03_14105 PF17200 Single Cache domain 2 C5P03_14105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_14105 PF00672 HAMP domain C5P03_14110 PF01227 GTP cyclohydrolase I C5P03_14115 PF03454 MoeA C-terminal region (domain IV) C5P03_14115 PF03453 MoeA N-terminal region (domain I and II) C5P03_14115 PF00994 Probable molybdopterin binding domain C5P03_14120 PF00899 ThiF family C5P03_14125 PF06291 Bor protein C5P03_14130 PF06291 Bor protein C5P03_14140 PF06406 StbA protein C5P03_14150 PF00005 ABC transporter C5P03_14150 PF03459 TOBE domain C5P03_14155 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_14165 PF02391 MoaE protein C5P03_14170 PF02597 ThiS family C5P03_14175 PF01967 MoaC family C5P03_14180 PF00994 Probable molybdopterin binding domain C5P03_14185 PF03264 NapC/NirT cytochrome c family, N-terminal region C5P03_14190 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C5P03_14195 PF13237 4Fe-4S dicluster domain C5P03_14195 PF12801 4Fe-4S binding domain C5P03_14200 PF12800 4Fe-4S binding domain C5P03_14200 PF12838 4Fe-4S dicluster domain C5P03_14205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C5P03_14205 PF01568 Molydopterin dinucleotide binding domain C5P03_14205 PF10518 TAT (twin-arginine translocation) pathway signal sequence C5P03_14205 PF00384 Molybdopterin oxidoreductase C5P03_14215 PF12838 4Fe-4S dicluster domain C5P03_14215 PF13187 4Fe-4S dicluster domain C5P03_14220 PF06463 Molybdenum Cofactor Synthesis C C5P03_14220 PF04055 Radical SAM superfamily C5P03_14225 PF07730 Histidine kinase C5P03_14225 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C5P03_14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_14225 PF00672 HAMP domain C5P03_14230 PF00072 Response regulator receiver domain C5P03_14230 PF00196 Bacterial regulatory proteins, luxR family C5P03_14240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_14240 PF09456 RcsC Alpha-Beta-Loop (ABL) C5P03_14240 PF00072 Response regulator receiver domain C5P03_14240 PF00512 His Kinase A (phospho-acceptor) domain C5P03_14250 PF01933 Uncharacterised protein family UPF0052 C5P03_14260 PF13230 Glutamine amidotransferases class-II C5P03_14265 PF13580 SIS domain C5P03_14270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C5P03_14270 PF09317 Domain of unknown function (DUF1974) C5P03_14270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C5P03_14270 PF02770 Acyl-CoA dehydrogenase, middle domain C5P03_14275 PF11849 Domain of unknown function (DUF3369) C5P03_14285 PF00929 Exonuclease C5P03_14290 PF00075 RNase H C5P03_14295 PF08241 Methyltransferase domain C5P03_14300 PF16123 Hydroxyacylglutathione hydrolase C-terminus C5P03_14300 PF00753 Metallo-beta-lactamase superfamily C5P03_14305 PF01464 Transglycosylase SLT domain C5P03_14305 PF01476 LysM domain C5P03_14310 PF03372 Endonuclease/Exonuclease/phosphatase family C5P03_14320 PF03061 Thioesterase superfamily C5P03_14330 PF00356 Bacterial regulatory proteins, lacI family C5P03_14335 PF14718 Soluble lytic murein transglycosylase L domain C5P03_14335 PF01464 Transglycosylase SLT domain C5P03_14340 PF00990 Diguanylate cyclase, GGDEF domain C5P03_14340 PF03707 Bacterial signalling protein N terminal repeat C5P03_14340 PF00563 EAL domain C5P03_14345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C5P03_14360 PF04357 TamB, inner membrane protein subunit of TAM complex C5P03_14365 PF01103 Surface antigen C5P03_14365 PF07244 Surface antigen variable number repeat C5P03_14365 PF17243 POTRA domain TamA domain 1 C5P03_14385 PF01625 Peptide methionine sulfoxide reductase C5P03_14395 PF02627 Carboxymuconolactone decarboxylase family C5P03_14400 PF00403 Heavy-metal-associated domain C5P03_14400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C5P03_14400 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_14405 PF13416 Bacterial extracellular solute-binding protein C5P03_14410 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_14415 PF00005 ABC transporter C5P03_14420 PF01066 CDP-alcohol phosphatidyltransferase C5P03_14425 PF13406 Transglycosylase SLT domain C5P03_14430 PF01047 MarR family C5P03_14440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C5P03_14440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C5P03_14440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C5P03_14440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C5P03_14445 PF03925 SeqA protein C-terminal domain C5P03_14445 PF17206 SeqA protein N-terminal domain C5P03_14450 PF12697 Alpha/beta hydrolase family C5P03_14460 PF01402 Ribbon-helix-helix protein, copG family C5P03_14465 PF00258 Flavodoxin C5P03_14475 PF01475 Ferric uptake regulator family C5P03_14480 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C5P03_14480 PF00749 tRNA synthetases class I (E and Q), catalytic domain C5P03_14490 PF03173 Putative carbohydrate binding domain C5P03_14490 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C5P03_14490 PF00728 Glycosyl hydrolase family 20, catalytic domain C5P03_14490 PF02838 Glycosyl hydrolase family 20, domain 2 C5P03_14495 PF02378 Phosphotransferase system, EIIC C5P03_14495 PF00367 phosphotransferase system, EIIB C5P03_14495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C5P03_14500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C5P03_14505 PF01979 Amidohydrolase family C5P03_14510 PF00480 ROK family C5P03_14510 PF01047 MarR family C5P03_14530 PF01648 4'-phosphopantetheinyl transferase superfamily C5P03_14530 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C5P03_14540 PF13439 Glycosyltransferase Family 4 C5P03_14540 PF00534 Glycosyl transferases group 1 C5P03_14550 PF00550 Phosphopantetheine attachment site C5P03_14550 PF00668 Condensation domain C5P03_14550 PF00501 AMP-binding enzyme C5P03_14550 PF13193 AMP-binding enzyme C-terminal domain C5P03_14555 PF00109 Beta-ketoacyl synthase, N-terminal domain C5P03_14555 PF16197 Ketoacyl-synthetase C-terminal extension C5P03_14555 PF08659 KR domain C5P03_14555 PF00550 Phosphopantetheine attachment site C5P03_14555 PF14765 Polyketide synthase dehydratase C5P03_14555 PF00698 Acyl transferase domain C5P03_14555 PF02801 Beta-ketoacyl synthase, C-terminal domain C5P03_14555 PF08240 Alcohol dehydrogenase GroES-like domain C5P03_14565 PF00668 Condensation domain C5P03_14565 PF00550 Phosphopantetheine attachment site C5P03_14565 PF00109 Beta-ketoacyl synthase, N-terminal domain C5P03_14565 PF00698 Acyl transferase domain C5P03_14565 PF02801 Beta-ketoacyl synthase, C-terminal domain C5P03_14565 PF16197 Ketoacyl-synthetase C-terminal extension C5P03_14580 PF01695 IstB-like ATP binding protein C5P03_14585 PF00665 Integrase core domain C5P03_14595 PF00975 Thioesterase domain C5P03_14595 PF00550 Phosphopantetheine attachment site C5P03_14595 PF13193 AMP-binding enzyme C-terminal domain C5P03_14595 PF00501 AMP-binding enzyme C5P03_14595 PF00668 Condensation domain C5P03_14605 PF03173 Putative carbohydrate binding domain C5P03_14605 PF02838 Glycosyl hydrolase family 20, domain 2 C5P03_14605 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C5P03_14605 PF00728 Glycosyl hydrolase family 20, catalytic domain C5P03_14610 PF08019 Phosphoethanolamine transferase EptA/EptB C5P03_14610 PF00884 Sulfatase C5P03_14615 PF01709 Transcriptional regulator C5P03_14620 PF00152 tRNA synthetases class II (D, K and N) C5P03_14620 PF02938 GAD domain C5P03_14620 PF01336 OB-fold nucleic acid binding domain C5P03_14630 PF13649 Methyltransferase domain C5P03_14635 PF08003 Protein of unknown function (DUF1698) C5P03_14655 PF00578 AhpC/TSA family C5P03_14655 PF10417 C-terminal domain of 1-Cys peroxiredoxin C5P03_14665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_14665 PF03466 LysR substrate binding domain C5P03_14670 PF12563 Hemolytic toxin N terminal C5P03_14670 PF07968 Leukocidin/Hemolysin toxin family C5P03_14675 PF00877 NlpC/P60 family C5P03_14685 PF00171 Aldehyde dehydrogenase family C5P03_14690 PF00440 Bacterial regulatory proteins, tetR family C5P03_14690 PF17932 Tetracyclin repressor-like, C-terminal domain C5P03_14700 PF00465 Iron-containing alcohol dehydrogenase C5P03_14710 PF00291 Pyridoxal-phosphate dependent enzyme C5P03_14725 PF01740 STAS domain C5P03_14725 PF00916 Sulfate permease family C5P03_14730 PF01554 MatE C5P03_14740 PF04325 Protein of unknown function (DUF465) C5P03_14755 PF03476 MOSC N-terminal beta barrel domain C5P03_14755 PF03473 MOSC domain C5P03_14755 PF00111 2Fe-2S iron-sulfur cluster binding domain C5P03_14755 PF03473 MOSC domain C5P03_14755 PF00111 2Fe-2S iron-sulfur cluster binding domain C5P03_14755 PF03476 MOSC N-terminal beta barrel domain C5P03_14760 PF08447 PAS fold C5P03_14760 PF13426 PAS domain C5P03_14760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_14765 PF01435 Peptidase family M48 C5P03_14775 PF08241 Methyltransferase domain C5P03_14775 PF12697 Alpha/beta hydrolase family C5P03_14780 PF00155 Aminotransferase class I and II C5P03_14785 PF06968 Biotin and Thiamin Synthesis associated domain C5P03_14785 PF04055 Radical SAM superfamily C5P03_14790 PF00202 Aminotransferase class-III C5P03_14805 PF01336 OB-fold nucleic acid binding domain C5P03_14805 PF00152 tRNA synthetases class II (D, K and N) C5P03_14810 PF03605 Anaerobic c4-dicarboxylate membrane transporter C5P03_14825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_14825 PF03466 LysR substrate binding domain C5P03_14830 PF03960 ArsC family C5P03_14835 PF07687 Peptidase dimerisation domain C5P03_14835 PF01546 Peptidase family M20/M25/M40 C5P03_14840 PF02557 D-alanyl-D-alanine carboxypeptidase C5P03_14850 PF02080 TrkA-C domain C5P03_14850 PF00999 Sodium/hydrogen exchanger family C5P03_14850 PF03471 Transporter associated domain C5P03_14860 PF03471 Transporter associated domain C5P03_14860 PF00999 Sodium/hydrogen exchanger family C5P03_14860 PF02080 TrkA-C domain C5P03_14870 PF01810 LysE type translocator C5P03_14875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_14875 PF12729 Four helix bundle sensory module for signal transduction C5P03_14875 PF00672 HAMP domain C5P03_14880 PF07509 Protein of unknown function (DUF1523) C5P03_14895 PF01156 Inosine-uridine preferring nucleoside hydrolase C5P03_14900 PF00849 RNA pseudouridylate synthase C5P03_14905 PF01048 Phosphorylase superfamily C5P03_14910 PF00465 Iron-containing alcohol dehydrogenase C5P03_14945 PF00437 Type II/IV secretion system protein C5P03_14950 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C5P03_14960 PF13629 Pilus formation protein N terminal region C5P03_14960 PF00263 Bacterial type II and III secretion system protein C5P03_14960 PF04972 BON domain C5P03_14990 PF04355 SmpA / OmlA family C5P03_14995 PF13460 NAD(P)H-binding C5P03_15005 PF03364 Polyketide cyclase / dehydrase and lipid transport C5P03_15010 PF01668 SmpB protein C5P03_15095 PF03466 LysR substrate binding domain C5P03_15095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_15100 PF02447 GntP family permease C5P03_15105 PF00291 Pyridoxal-phosphate dependent enzyme C5P03_15115 PF00180 Isocitrate/isopropylmalate dehydrogenase C5P03_15120 PF12833 Helix-turn-helix domain C5P03_15125 PF01238 Phosphomannose isomerase type I C5P03_15150 PF00155 Aminotransferase class I and II C5P03_15155 PF00367 phosphotransferase system, EIIB C5P03_15155 PF02378 Phosphotransferase system, EIIC C5P03_15160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C5P03_15160 PF00356 Bacterial regulatory proteins, lacI family C5P03_15175 PF00561 alpha/beta hydrolase fold C5P03_15180 PF07690 Major Facilitator Superfamily C5P03_15185 PF01040 UbiA prenyltransferase family C5P03_15195 PF00115 Cytochrome C and Quinol oxidase polypeptide I C5P03_15200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C5P03_15200 PF06481 COX Aromatic Rich Motif C5P03_15210 PF00034 Cytochrome c C5P03_15210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C5P03_15220 PF01156 Inosine-uridine preferring nucleoside hydrolase C5P03_15235 PF00127 Copper binding proteins, plastocyanin/azurin family C5P03_15240 PF02424 ApbE family C5P03_15255 PF03372 Endonuclease/Exonuclease/phosphatase family C5P03_15260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_15265 PF00873 AcrB/AcrD/AcrF family C5P03_15280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_15280 PF00529 HlyD membrane-fusion protein of T1SS C5P03_15285 PF00873 AcrB/AcrD/AcrF family C5P03_15295 PF10437 Bacterial lipoate protein ligase C-terminus C5P03_15295 PF03099 Biotin/lipoate A/B protein ligase family C5P03_15300 PF00990 Diguanylate cyclase, GGDEF domain C5P03_15300 PF00563 EAL domain C5P03_15300 PF03707 Bacterial signalling protein N terminal repeat C5P03_15305 PF00873 AcrB/AcrD/AcrF family C5P03_15320 PF04143 Sulphur transport C5P03_15345 PF02308 MgtC family C5P03_15350 PF13407 Periplasmic binding protein domain C5P03_15350 PF00356 Bacterial regulatory proteins, lacI family C5P03_15360 PF02378 Phosphotransferase system, EIIC C5P03_15360 PF00367 phosphotransferase system, EIIB C5P03_15365 PF00294 pfkB family carbohydrate kinase C5P03_15370 PF11471 Maltoporin periplasmic N-terminal extension C5P03_15370 PF02264 LamB porin C5P03_15375 PF00684 DnaJ central domain C5P03_15375 PF01556 DnaJ C terminal domain C5P03_15375 PF00226 DnaJ domain C5P03_15380 PF00012 Hsp70 protein C5P03_15385 PF01025 GrpE C5P03_15390 PF01513 ATP-NAD kinase C5P03_15395 PF02463 RecF/RecN/SMC N terminal domain C5P03_15400 PF01368 DHH family C5P03_15400 PF02833 DHHA2 domain C5P03_15410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_15415 PF02687 FtsX-like permease family C5P03_15415 PF12704 MacB-like periplasmic core domain C5P03_15415 PF00005 ABC transporter C5P03_15420 PF02321 Outer membrane efflux protein C5P03_15425 PF04954 Siderophore-interacting protein C5P03_15425 PF08021 Siderophore-interacting FAD-binding domain C5P03_15430 PF00793 DAHP synthetase I family C5P03_15440 PF00872 Transposase, Mutator family C5P03_15445 PF00816 H-NS histone family C5P03_15470 PF07883 Cupin domain C5P03_15470 PF12833 Helix-turn-helix domain C5P03_15480 PF01266 FAD dependent oxidoreductase C5P03_15485 PF01381 Helix-turn-helix C5P03_15485 PF07883 Cupin domain C5P03_15490 PF00171 Aldehyde dehydrogenase family C5P03_15495 PF00202 Aminotransferase class-III C5P03_15500 PF00324 Amino acid permease C5P03_15505 PF00324 Amino acid permease C5P03_15510 PF02690 Na+/Pi-cotransporter C5P03_15515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C5P03_15515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5P03_15520 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C5P03_15535 PF01048 Phosphorylase superfamily C5P03_15550 PF01797 Transposase IS200 like C5P03_15575 PF00291 Pyridoxal-phosphate dependent enzyme C5P03_15575 PF14821 Threonine synthase N terminus C5P03_15580 PF00288 GHMP kinases N terminal domain C5P03_15580 PF08544 GHMP kinases C terminal C5P03_15585 PF00742 Homoserine dehydrogenase C5P03_15585 PF13840 ACT domain C5P03_15585 PF01842 ACT domain C5P03_15585 PF03447 Homoserine dehydrogenase, NAD binding domain C5P03_15585 PF00696 Amino acid kinase family C5P03_15595 PF00588 SpoU rRNA Methylase family C5P03_15600 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C5P03_15615 PF03737 Aldolase/RraA C5P03_15625 PF00486 Transcriptional regulatory protein, C terminal C5P03_15625 PF00072 Response regulator receiver domain C5P03_15640 PF00005 ABC transporter C5P03_15640 PF00664 ABC transporter transmembrane region C5P03_15645 PF00005 ABC transporter C5P03_15645 PF00664 ABC transporter transmembrane region C5P03_15665 PF01980 tRNA-methyltransferase O C5P03_15665 PF18389 TrmO C-terminal domain C5P03_15670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C5P03_15670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C5P03_15685 PF00291 Pyridoxal-phosphate dependent enzyme C5P03_15690 PF00381 PTS HPr component phosphorylation site C5P03_15695 PF00391 PEP-utilising enzyme, mobile domain C5P03_15695 PF05524 PEP-utilising enzyme, N-terminal C5P03_15695 PF02896 PEP-utilising enzyme, TIM barrel domain C5P03_15700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C5P03_15705 PF08448 PAS fold C5P03_15705 PF00990 Diguanylate cyclase, GGDEF domain C5P03_15715 PF01292 Prokaryotic cytochrome b561 C5P03_15725 PF13476 AAA domain C5P03_15730 PF12320 Type 5 capsule protein repressor C-terminal domain C5P03_15730 PF00149 Calcineurin-like phosphoesterase C5P03_15740 PF04381 Putative exonuclease, RdgC C5P03_15750 PF00999 Sodium/hydrogen exchanger family C5P03_15750 PF02254 TrkA-N domain C5P03_15755 PF02254 TrkA-N domain C5P03_15755 PF00999 Sodium/hydrogen exchanger family C5P03_15760 PF04151 Bacterial pre-peptidase C-terminal domain C5P03_15760 PF04389 Peptidase family M28 C5P03_15770 PF00224 Pyruvate kinase, barrel domain C5P03_15770 PF02887 Pyruvate kinase, alpha/beta domain C5P03_15775 PF00924 Mechanosensitive ion channel C5P03_15775 PF12795 Mechanosensitive ion channel porin domain C5P03_15775 PF12794 Mechanosensitive ion channel inner membrane domain 1 C5P03_15815 PF02634 FdhD/NarQ family C5P03_15825 PF00512 His Kinase A (phospho-acceptor) domain C5P03_15825 PF00989 PAS fold C5P03_15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_15835 PF12849 PBP superfamily domain C5P03_15840 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_15845 PF00005 ABC transporter C5P03_15850 PF12804 MobA-like NTP transferase domain C5P03_15855 PF03453 MoeA N-terminal region (domain I and II) C5P03_15855 PF00994 Probable molybdopterin binding domain C5P03_15855 PF03454 MoeA C-terminal region (domain IV) C5P03_15860 PF04632 Fusaric acid resistance protein family C5P03_15870 PF13426 PAS domain C5P03_15870 PF08447 PAS fold C5P03_15870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_15880 PF10725 Protein of unknown function (DUF2517) C5P03_15900 PF00072 Response regulator receiver domain C5P03_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_15900 PF09308 LuxQ, periplasmic C5P03_15900 PF00512 His Kinase A (phospho-acceptor) domain C5P03_15905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_15910 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_15915 PF12911 N-terminal TM domain of oligopeptide transport permease C C5P03_15915 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_15920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5P03_15920 PF00005 ABC transporter C5P03_15925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5P03_15925 PF00005 ABC transporter C5P03_15935 PF01869 BadF/BadG/BcrA/BcrD ATPase family C5P03_15940 PF02838 Glycosyl hydrolase family 20, domain 2 C5P03_15940 PF00728 Glycosyl hydrolase family 20, catalytic domain C5P03_15945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_15945 PF08447 PAS fold C5P03_15955 PF01131 DNA topoisomerase C5P03_15955 PF01396 Topoisomerase DNA binding C4 zinc finger C5P03_15955 PF08272 Topoisomerase I zinc-ribbon-like C5P03_15955 PF01751 Toprim domain C5P03_15960 PF04996 Succinylarginine dihydrolase C5P03_15965 PF01343 Peptidase family S49 C5P03_15965 PF08496 Peptidase family S49 N-terminal C5P03_15970 PF00106 short chain dehydrogenase C5P03_15975 PF03466 LysR substrate binding domain C5P03_15975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_15980 PF07690 Major Facilitator Superfamily C5P03_15985 PF00155 Aminotransferase class I and II C5P03_15995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_15995 PF03466 LysR substrate binding domain C5P03_16005 PF01161 Phosphatidylethanolamine-binding protein C5P03_16025 PF00072 Response regulator receiver domain C5P03_16025 PF00196 Bacterial regulatory proteins, luxR family C5P03_16055 PF00999 Sodium/hydrogen exchanger family C5P03_16055 PF02080 TrkA-C domain C5P03_16055 PF02254 TrkA-N domain C5P03_16060 PF00990 Diguanylate cyclase, GGDEF domain C5P03_16060 PF07694 5TMR of 5TMR-LYT C5P03_16065 PF11734 TilS substrate C-terminal domain C5P03_16065 PF09179 TilS substrate binding domain C5P03_16065 PF01171 PP-loop family C5P03_16070 PF01431 Peptidase family M13 C5P03_16070 PF05649 Peptidase family M13 C5P03_16080 PF12848 ABC transporter C5P03_16080 PF16326 ABC transporter C-terminal domain C5P03_16080 PF00005 ABC transporter C5P03_16085 PF13302 Acetyltransferase (GNAT) domain C5P03_16090 PF13520 Amino acid permease C5P03_16100 PF03466 LysR substrate binding domain C5P03_16100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_16110 PF08543 Phosphomethylpyrimidine kinase C5P03_16115 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C5P03_16115 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C5P03_16115 PF01276 Orn/Lys/Arg decarboxylase, major domain C5P03_16120 PF13520 Amino acid permease C5P03_16125 PF00486 Transcriptional regulatory protein, C terminal C5P03_16125 PF18500 CadC C-terminal domain 1 C5P03_16130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C5P03_16135 PF14579 Helix-hairpin-helix motif C5P03_16135 PF01336 OB-fold nucleic acid binding domain C5P03_16135 PF02811 PHP domain C5P03_16135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C5P03_16135 PF07733 Bacterial DNA polymerase III alpha NTPase domain C5P03_16140 PF01351 Ribonuclease HII C5P03_16145 PF02684 Lipid-A-disaccharide synthetase C5P03_16150 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C5P03_16150 PF00132 Bacterial transferase hexapeptide (six repeats) C5P03_16155 PF07977 FabA-like domain C5P03_16160 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C5P03_16160 PF00132 Bacterial transferase hexapeptide (six repeats) C5P03_16165 PF03938 Outer membrane protein (OmpH-like) C5P03_16170 PF07244 Surface antigen variable number repeat C5P03_16170 PF01103 Surface antigen C5P03_16175 PF17820 PDZ domain C5P03_16175 PF02163 Peptidase family M50 C5P03_16180 PF13288 DXP reductoisomerase C-terminal domain C5P03_16180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C5P03_16180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C5P03_16190 PF01255 Putative undecaprenyl diphosphate synthase C5P03_16195 PF01765 Ribosome recycling factor C5P03_16200 PF00696 Amino acid kinase family C5P03_16205 PF00889 Elongation factor TS C5P03_16210 PF00318 Ribosomal protein S2 C5P03_16215 PF00557 Metallopeptidase family M24 C5P03_16220 PF08335 GlnD PII-uridylyltransferase C5P03_16220 PF01842 ACT domain C5P03_16220 PF01966 HD domain C5P03_16220 PF01909 Nucleotidyltransferase domain C5P03_16225 PF14602 Hexapeptide repeat of succinyl-transferase C5P03_16225 PF00132 Bacterial transferase hexapeptide (six repeats) C5P03_16225 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C5P03_16230 PF11944 Protein of unknown function (DUF3461) C5P03_16235 PF00367 phosphotransferase system, EIIB C5P03_16235 PF02378 Phosphotransferase system, EIIC C5P03_16255 PF02264 LamB porin C5P03_16260 PF00258 Flavodoxin C5P03_16265 PF00849 RNA pseudouridylate synthase C5P03_16270 PF04287 tRNA pseudouridine synthase C C5P03_16295 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C5P03_16300 PF07348 Syd protein (SUKH-2) C5P03_16305 PF14489 QueF-like protein C5P03_16305 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C5P03_16315 PF07694 5TMR of 5TMR-LYT C5P03_16315 PF00990 Diguanylate cyclase, GGDEF domain C5P03_16320 PF11892 Domain of unknown function (DUF3412) C5P03_16320 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C5P03_16320 PF03641 Possible lysine decarboxylase C5P03_16325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C5P03_16325 PF01367 5'-3' exonuclease, C-terminal SAM fold C5P03_16330 PF00180 Isocitrate/isopropylmalate dehydrogenase C5P03_16330 PF18324 Hypothetical protein TT1725 C5P03_16340 PF01728 FtsJ-like methyltransferase C5P03_16340 PF18125 RlmM ferredoxin-like domain C5P03_16345 PF04241 Protein of unknown function (DUF423) C5P03_16355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_16355 PF03466 LysR substrate binding domain C5P03_16360 PF00672 HAMP domain C5P03_16360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_16365 PF00817 impB/mucB/samB family C5P03_16365 PF11798 IMS family HHH motif C5P03_16365 PF11799 impB/mucB/samB family C-terminal domain C5P03_16380 PF02424 ApbE family C5P03_16385 PF00111 2Fe-2S iron-sulfur cluster binding domain C5P03_16385 PF00970 Oxidoreductase FAD-binding domain C5P03_16385 PF00175 Oxidoreductase NAD-binding domain C5P03_16390 PF02508 Rnf-Nqr subunit, membrane protein C5P03_16395 PF02508 Rnf-Nqr subunit, membrane protein C5P03_16400 PF04205 FMN-binding domain C5P03_16405 PF03116 NQR2, RnfD, RnfE family C5P03_16410 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C5P03_16410 PF11973 NQRA C-terminal domain C5P03_16415 PF01722 BolA-like protein C5P03_16420 PF05175 Methyltransferase small domain C5P03_16430 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C5P03_16440 PF07690 Major Facilitator Superfamily C5P03_16445 PF03502 Nucleoside-specific channel-forming protein, Tsx C5P03_16450 PF04461 Protein of unknown function (DUF520) C5P03_16455 PF08546 Ketopantoate reductase PanE/ApbA C terminal C5P03_16455 PF02558 Ketopantoate reductase PanE/ApbA C5P03_16460 PF01965 DJ-1/PfpI family C5P03_16470 PF03306 Alpha-acetolactate decarboxylase C5P03_16475 PF03466 LysR substrate binding domain C5P03_16475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_16480 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain C5P03_16480 PF10091 Putative glucoamylase C5P03_16480 PF06165 Glycosyltransferase family 36 C5P03_16495 PF13462 Thioredoxin C5P03_16495 PF06965 Na+/H+ antiporter 1 C5P03_16500 PF16363 GDP-mannose 4,6 dehydratase C5P03_16505 PF00111 2Fe-2S iron-sulfur cluster binding domain C5P03_16505 PF00175 Oxidoreductase NAD-binding domain C5P03_16505 PF00970 Oxidoreductase FAD-binding domain C5P03_16510 PF03063 Prismane/CO dehydrogenase family C5P03_16515 PF00210 Ferritin-like domain C5P03_16555 PF00106 short chain dehydrogenase C5P03_16565 PF00875 DNA photolyase C5P03_16565 PF03441 FAD binding domain of DNA photolyase C5P03_16570 PF13411 MerR HTH family regulatory protein C5P03_16575 PF08349 Protein of unknown function (DUF1722) C5P03_16605 PF01817 Chorismate mutase type II C5P03_16605 PF00800 Prephenate dehydratase C5P03_16630 PF07995 Glucose / Sorbosone dehydrogenase C5P03_16640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_16650 PF00106 short chain dehydrogenase C5P03_16675 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C5P03_16685 PF02805 Metal binding domain of Ada C5P03_16685 PF06029 AlkA N-terminal domain C5P03_16685 PF12833 Helix-turn-helix domain C5P03_16685 PF00730 HhH-GPD superfamily base excision DNA repair protein C5P03_16690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C5P03_16690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C5P03_16700 PF06906 Protein of unknown function (DUF1272) C5P03_16715 PF01810 LysE type translocator C5P03_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_16720 PF03466 LysR substrate binding domain C5P03_16725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C5P03_16725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C5P03_16745 PF01584 CheW-like domain C5P03_16745 PF01627 Hpt domain C5P03_16745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_16745 PF02895 Signal transducing histidine kinase, homodimeric domain C5P03_16750 PF00672 HAMP domain C5P03_16750 PF12729 Four helix bundle sensory module for signal transduction C5P03_16750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_16755 PF01584 CheW-like domain C5P03_16760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_16760 PF00672 HAMP domain C5P03_16760 PF02203 Tar ligand binding domain homologue C5P03_16765 PF01739 CheR methyltransferase, SAM binding domain C5P03_16765 PF03705 CheR methyltransferase, all-alpha domain C5P03_16770 PF03975 CheD chemotactic sensory transduction C5P03_16775 PF01339 CheB methylesterase C5P03_16775 PF00072 Response regulator receiver domain C5P03_16780 PF00266 Aminotransferase class-V C5P03_16805 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C5P03_16805 PF00072 Response regulator receiver domain C5P03_16805 PF01627 Hpt domain C5P03_16805 PF00512 His Kinase A (phospho-acceptor) domain C5P03_16805 PF00672 HAMP domain C5P03_16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_16830 PF00563 EAL domain C5P03_16830 PF00989 PAS fold C5P03_16830 PF00990 Diguanylate cyclase, GGDEF domain C5P03_16830 PF01590 GAF domain C5P03_16840 PF12838 4Fe-4S dicluster domain C5P03_16845 PF01168 Alanine racemase, N-terminal domain C5P03_16845 PF00842 Alanine racemase, C-terminal domain C5P03_16850 PF03796 DnaB-like helicase C terminal domain C5P03_16850 PF00772 DnaB-like helicase N terminal domain C5P03_16855 PF03796 DnaB-like helicase C terminal domain C5P03_16855 PF00772 DnaB-like helicase N terminal domain C5P03_16875 PF00149 Calcineurin-like phosphoesterase C5P03_16875 PF02872 5'-nucleotidase, C-terminal domain C5P03_16895 PF00158 Sigma-54 interaction domain C5P03_16895 PF00072 Response regulator receiver domain C5P03_16895 PF02954 Bacterial regulatory protein, Fis family C5P03_16900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C5P03_16900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5P03_16910 PF04102 SlyX C5P03_16915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5P03_16920 PF09526 Probable metal-binding protein (DUF2387) C5P03_16930 PF00072 Response regulator receiver domain C5P03_16930 PF01584 CheW-like domain C5P03_16935 PF00561 alpha/beta hydrolase fold C5P03_16940 PF00563 EAL domain C5P03_16940 PF00360 Phytochrome region C5P03_16940 PF00990 Diguanylate cyclase, GGDEF domain C5P03_16940 PF01590 GAF domain C5P03_16945 PF06794 Uncharacterised protein family (UPF0270) C5P03_16950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C5P03_16950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C5P03_16950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C5P03_16955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C5P03_16960 PF00535 Glycosyl transferase family 2 C5P03_16970 PF01522 Polysaccharide deacetylase C5P03_16975 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C5P03_16980 PF00892 EamA-like transporter family C5P03_16990 PF00485 Phosphoribulokinase / Uridine kinase family C5P03_17005 PF02566 OsmC-like protein C5P03_17010 PF00027 Cyclic nucleotide-binding domain C5P03_17010 PF13545 Crp-like helix-turn-helix domain C5P03_17015 PF08241 Methyltransferase domain C5P03_17020 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C5P03_17020 PF18416 N-acetylglucosamine binding protein domain 2 C5P03_17025 PF17945 Beta/Gamma crystallin C5P03_17025 PF12561 ToxR activated gene A lipoprotein domain C5P03_17045 PF13443 Cro/C1-type HTH DNA-binding domain C5P03_17055 PF12832 MFS_1 like family C5P03_17060 PF00593 TonB dependent receptor C5P03_17060 PF07715 TonB-dependent Receptor Plug Domain C5P03_17080 PF01243 Pyridoxamine 5'-phosphate oxidase C5P03_17085 PF06228 Haem utilisation ChuX/HutX C5P03_17095 PF01032 FecCD transport family C5P03_17100 PF00005 ABC transporter C5P03_17110 PF01370 NAD dependent epimerase/dehydratase family C5P03_17120 PF12848 ABC transporter C5P03_17120 PF00005 ABC transporter C5P03_17135 PF05099 Tellurite resistance protein TerB C5P03_17135 PF00226 DnaJ domain C5P03_17140 PF00483 Nucleotidyl transferase C5P03_17145 PF01636 Phosphotransferase enzyme family C5P03_17150 PF04453 LPS transport system D C5P03_17150 PF03968 OstA-like protein C5P03_17155 PF00639 PPIC-type PPIASE domain C5P03_17155 PF09312 SurA N-terminal domain C5P03_17160 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C5P03_17165 PF00398 Ribosomal RNA adenine dimethylase C5P03_17170 PF04379 ApaG domain C5P03_17175 PF00149 Calcineurin-like phosphoesterase C5P03_17190 PF00296 Luciferase-like monooxygenase C5P03_17220 PF01018 GTP1/OBG C5P03_17220 PF01926 50S ribosome-binding GTPase C5P03_17225 PF01016 Ribosomal L27 protein C5P03_17230 PF00829 Ribosomal prokaryotic L21 protein C5P03_17235 PF00348 Polyprenyl synthetase C5P03_17240 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C5P03_17245 PF01145 SPFH domain / Band 7 family C5P03_17250 PF01145 SPFH domain / Band 7 family C5P03_17250 PF12221 Bacterial membrane protein N terminal C5P03_17255 PF16360 GTP-binding GTPase Middle Region C5P03_17255 PF13167 GTP-binding GTPase N-terminal C5P03_17255 PF01926 50S ribosome-binding GTPase C5P03_17260 PF17209 Hfq protein C5P03_17270 PF01119 DNA mismatch repair protein, C-terminal domain C5P03_17270 PF08676 MutL C terminal dimerisation domain C5P03_17275 PF01520 N-acetylmuramoyl-L-alanine amidase C5P03_17280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C5P03_17290 PF08331 Domain of unknown function (DUF1730) C5P03_17295 PF00480 ROK family C5P03_17305 PF00005 ABC transporter C5P03_17305 PF09383 NIL domain C5P03_17310 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_17315 PF03180 NLPA lipoprotein C5P03_17320 PF02357 Transcription termination factor nusG C5P03_17325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_17325 PF00672 HAMP domain C5P03_17325 PF12729 Four helix bundle sensory module for signal transduction C5P03_17345 PF01966 HD domain C5P03_17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_17350 PF00512 His Kinase A (phospho-acceptor) domain C5P03_17350 PF18415 Histidine kinase receptor ArcB trans-membrane domain C5P03_17350 PF01627 Hpt domain C5P03_17350 PF00989 PAS fold C5P03_17350 PF00072 Response regulator receiver domain C5P03_17375 PF03466 LysR substrate binding domain C5P03_17375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_17385 PF01259 SAICAR synthetase C5P03_17390 PF06804 NlpB/DapX lipoprotein C5P03_17395 PF00701 Dihydrodipicolinate synthetase family C5P03_17400 PF01842 ACT domain C5P03_17405 PF00578 AhpC/TSA family C5P03_17410 PF03887 YfbU domain C5P03_17415 PF04217 Protein of unknown function, DUF412 C5P03_17420 PF00871 Acetokinase family C5P03_17425 PF07085 DRTGG domain C5P03_17425 PF01515 Phosphate acetyl/butaryl transferase C5P03_17430 PF10369 Small subunit of acetolactate synthase C5P03_17435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C5P03_17435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C5P03_17435 PF00205 Thiamine pyrophosphate enzyme, central domain C5P03_17450 PF01569 PAP2 superfamily C5P03_17460 PF00682 HMGL-like C5P03_17460 PF08502 LeuA allosteric (dimerisation) domain C5P03_17465 PF00180 Isocitrate/isopropylmalate dehydrogenase C5P03_17470 PF00330 Aconitase family (aconitate hydratase) C5P03_17475 PF00694 Aconitase C-terminal domain C5P03_17495 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_17500 PF00005 ABC transporter C5P03_17505 PF13638 PIN domain C5P03_17505 PF02562 PhoH-like protein C5P03_17515 PF08343 Ribonucleotide reductase N-terminal C5P03_17515 PF00317 Ribonucleotide reductase, all-alpha domain C5P03_17515 PF02867 Ribonucleotide reductase, barrel domain C5P03_17545 PF18339 RapA N-terminal Tudor like domain 1 C5P03_17545 PF18337 RapA N-terminal Tudor like domain C5P03_17545 PF12137 RNA polymerase recycling family C-terminal C5P03_17545 PF00271 Helicase conserved C-terminal domain C5P03_17545 PF00176 SNF2 family N-terminal domain C5P03_17550 PF00849 RNA pseudouridylate synthase C5P03_17560 PF13188 PAS domain C5P03_17560 PF03707 Bacterial signalling protein N terminal repeat C5P03_17560 PF00563 EAL domain C5P03_17560 PF00990 Diguanylate cyclase, GGDEF domain C5P03_17570 PF00118 TCP-1/cpn60 chaperonin family C5P03_17575 PF00166 Chaperonin 10 Kd subunit C5P03_17585 PF04186 FxsA cytoplasmic membrane protein C5P03_17590 PF00206 Lyase C5P03_17590 PF10415 Fumarase C C-terminus C5P03_17595 PF03605 Anaerobic c4-dicarboxylate membrane transporter C5P03_17600 PF00267 Gram-negative porin C5P03_17605 PF07690 Major Facilitator Superfamily C5P03_17610 PF03466 LysR substrate binding domain C5P03_17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_17620 PF13302 Acetyltransferase (GNAT) domain C5P03_17625 PF13302 Acetyltransferase (GNAT) domain C5P03_17645 PF07690 Major Facilitator Superfamily C5P03_17650 PF01725 Ham1 family C5P03_17655 PF04055 Radical SAM superfamily C5P03_17655 PF06969 HemN C-terminal domain C5P03_17660 PF03889 Alternative ribosome-rescue factor A C5P03_17665 PF01872 RibD C-terminal domain C5P03_17670 PF13411 MerR HTH family regulatory protein C5P03_17675 PF01808 AICARFT/IMPCHase bienzyme C5P03_17675 PF02142 MGS-like domain C5P03_17680 PF02844 Phosphoribosylglycinamide synthetase, N domain C5P03_17680 PF02843 Phosphoribosylglycinamide synthetase, C domain C5P03_17680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C5P03_17695 PF00128 Alpha amylase, catalytic domain C5P03_17725 PF04539 Sigma-70 region 3 C5P03_17725 PF04545 Sigma-70, region 4 C5P03_17725 PF00140 Sigma-70 factor, region 1.2 C5P03_17725 PF03979 Sigma-70 factor, region 1.1 C5P03_17725 PF04546 Sigma-70, non-essential region C5P03_17725 PF04542 Sigma-70 region 2 C5P03_17730 PF08278 DNA primase DnaG DnaB-binding C5P03_17730 PF08275 DNA primase catalytic core, N-terminal domain C5P03_17730 PF01807 CHC2 zinc finger C5P03_17730 PF10410 DnaB-helicase binding domain of primase C5P03_17735 PF09424 Yqey-like protein C5P03_17740 PF01165 Ribosomal protein S21 C5P03_17745 PF00814 Glycoprotease family C5P03_17750 PF04539 Sigma-70 region 3 C5P03_17750 PF04542 Sigma-70 region 2 C5P03_17750 PF04545 Sigma-70, region 4 C5P03_17750 PF00140 Sigma-70 factor, region 1.2 C5P03_17755 PF01551 Peptidase family M23 C5P03_17755 PF01476 LysM domain C5P03_17760 PF09335 SNARE associated Golgi protein C5P03_17770 PF01975 Survival protein SurE C5P03_17775 PF01142 tRNA pseudouridine synthase D (TruD) C5P03_17780 PF02542 YgbB family C5P03_17785 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C5P03_17790 PF04977 Septum formation initiator C5P03_17795 PF00113 Enolase, C-terminal TIM barrel domain C5P03_17795 PF03952 Enolase, N-terminal domain C5P03_17800 PF00117 Glutamine amidotransferase class-I C5P03_17800 PF06418 CTP synthase N-terminus C5P03_17805 PF03819 MazG nucleotide pyrophosphohydrolase domain C5P03_17810 PF13291 ACT domain C5P03_17810 PF04607 Region found in RelA / SpoT proteins C5P03_17810 PF02824 TGS domain C5P03_17815 PF01938 TRAM domain C5P03_17815 PF05958 tRNA (Uracil-5-)-methyltransferase C5P03_17820 PF00512 His Kinase A (phospho-acceptor) domain C5P03_17820 PF00672 HAMP domain C5P03_17820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_17820 PF01627 Hpt domain C5P03_17820 PF00072 Response regulator receiver domain C5P03_17820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C5P03_17825 PF07308 Protein of unknown function (DUF1456) C5P03_17830 PF01510 N-acetylmuramoyl-L-alanine amidase C5P03_17835 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C5P03_17840 PF11967 Recombination protein O N terminal C5P03_17840 PF02565 Recombination protein O C terminal C5P03_17845 PF01926 50S ribosome-binding GTPase C5P03_17845 PF07650 KH domain C5P03_17850 PF00035 Double-stranded RNA binding motif C5P03_17850 PF14622 Ribonuclease-III-like C5P03_17855 PF10502 Signal peptidase, peptidase S26 C5P03_17860 PF00679 Elongation factor G C-terminus C5P03_17860 PF00009 Elongation factor Tu GTP binding domain C5P03_17860 PF03144 Elongation factor Tu domain 2 C5P03_17860 PF06421 GTP-binding protein LepA C-terminus C5P03_17870 PF03888 MucB/RseB N-terminal domain C5P03_17870 PF17188 MucB/RseB C-terminal domain C5P03_17875 PF03872 Anti sigma-E protein RseA, N-terminal domain C5P03_17875 PF03873 Anti sigma-E protein RseA, C-terminal domain C5P03_17880 PF08281 Sigma-70, region 4 C5P03_17880 PF04542 Sigma-70 region 2 C5P03_17885 PF02910 Fumarate reductase flavoprotein C-term C5P03_17885 PF00890 FAD binding domain C5P03_17895 PF03937 Flavinator of succinate dehydrogenase C5P03_17900 PF01571 Aminomethyltransferase folate-binding domain C5P03_17920 PF03091 CutA1 divalent ion tolerance protein C5P03_17925 PF02683 Cytochrome C biogenesis protein transmembrane region C5P03_17925 PF11412 Disulphide bond corrector protein DsbC C5P03_17935 PF01266 FAD dependent oxidoreductase C5P03_17940 PF01116 Fructose-bisphosphate aldolase class-II C5P03_17945 PF00162 Phosphoglycerate kinase C5P03_17950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C5P03_17950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C5P03_17955 PF00480 ROK family C5P03_17975 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C5P03_17990 PF00005 ABC transporter C5P03_18010 PF08447 PAS fold C5P03_18010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_18030 PF02080 TrkA-C domain C5P03_18030 PF03600 Citrate transporter C5P03_18035 PF00009 Elongation factor Tu GTP binding domain C5P03_18040 PF01507 Phosphoadenosine phosphosulfate reductase family C5P03_18045 PF10414 Sirohaem synthase dimerisation region C5P03_18045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C5P03_18045 PF14824 Sirohaem biosynthesis protein central C5P03_18050 PF01145 SPFH domain / Band 7 family C5P03_18050 PF16200 C-terminal region of band_7 C5P03_18055 PF01957 NfeD-like C-terminal, partner-binding C5P03_18060 PF01380 SIS domain C5P03_18060 PF00571 CBS domain C5P03_18065 PF12848 ABC transporter C5P03_18065 PF00005 ABC transporter C5P03_18075 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C5P03_18140 PF13411 MerR HTH family regulatory protein C5P03_18150 PF00474 Sodium:solute symporter family C5P03_18155 PF17969 L,D-transpeptidase C-terminal domain C5P03_18155 PF03734 L,D-transpeptidase catalytic domain C5P03_18160 PF00924 Mechanosensitive ion channel C5P03_18165 PF00871 Acetokinase family C5P03_18170 PF04074 YhcH/YjgK/YiaL C5P03_18180 PF01177 Asp/Glu/Hydantoin racemase C5P03_18185 PF01810 LysE type translocator C5P03_18220 PF00209 Sodium:neurotransmitter symporter family C5P03_18230 PF00209 Sodium:neurotransmitter symporter family C5P03_18250 PF07690 Major Facilitator Superfamily C5P03_18260 PF01037 Lrp/AsnC ligand binding domain C5P03_18275 PF01047 MarR family C5P03_18280 PF02566 OsmC-like protein C5P03_18285 PF16884 N-terminal domain of oxidoreductase C5P03_18285 PF00107 Zinc-binding dehydrogenase C5P03_18290 PF00293 NUDIX domain C5P03_18305 PF03710 Glutamate-ammonia ligase adenylyltransferase C5P03_18305 PF08335 GlnD PII-uridylyltransferase C5P03_18310 PF00455 DeoR C terminal sensor domain C5P03_18310 PF08220 DeoR-like helix-turn-helix domain C5P03_18320 PF00106 short chain dehydrogenase C5P03_18325 PF03829 PTS system glucitol/sorbitol-specific IIA component C5P03_18330 PF07663 Sorbitol phosphotransferase enzyme II C-terminus C5P03_18330 PF03612 Sorbitol phosphotransferase enzyme II N-terminus C5P03_18335 PF03608 PTS system enzyme II sorbitol-specific factor C5P03_18340 PF03710 Glutamate-ammonia ligase adenylyltransferase C5P03_18340 PF08335 GlnD PII-uridylyltransferase C5P03_18365 PF05170 AsmA family C5P03_18370 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C5P03_18370 PF00326 Prolyl oligopeptidase family C5P03_18375 PF02687 FtsX-like permease family C5P03_18375 PF12704 MacB-like periplasmic core domain C5P03_18375 PF00005 ABC transporter C5P03_18380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5P03_18385 PF00486 Transcriptional regulatory protein, C terminal C5P03_18385 PF00072 Response regulator receiver domain C5P03_18390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_18390 PF00512 His Kinase A (phospho-acceptor) domain C5P03_18390 PF00672 HAMP domain C5P03_18390 PF16527 Two-component sensor protein CpxA, periplasmic domain C5P03_18395 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C5P03_18395 PF09297 NADH pyrophosphatase zinc ribbon domain C5P03_18395 PF00293 NUDIX domain C5P03_18425 PF03060 Nitronate monooxygenase C5P03_18435 PF00445 Ribonuclease T2 family C5P03_18455 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C5P03_18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_18470 PF03466 LysR substrate binding domain C5P03_18475 PF00270 DEAD/DEAH box helicase C5P03_18475 PF00271 Helicase conserved C-terminal domain C5P03_18485 PF00753 Metallo-beta-lactamase superfamily C5P03_18495 PF01425 Amidase C5P03_18500 PF04371 Porphyromonas-type peptidyl-arginine deiminase C5P03_18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_18505 PF03466 LysR substrate binding domain C5P03_18510 PF00106 short chain dehydrogenase C5P03_18525 PF00378 Enoyl-CoA hydratase/isomerase C5P03_18530 PF10952 Protein of unknown function (DUF2753) C5P03_18535 PF00132 Bacterial transferase hexapeptide (six repeats) C5P03_18545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_18560 PF02594 Uncharacterised ACR, YggU family COG1872 C5P03_18565 PF02325 YGGT family C5P03_18570 PF14748 Pyrroline-5-carboxylate reductase dimerisation C5P03_18570 PF03807 NADP oxidoreductase coenzyme F420-dependent C5P03_18575 PF01168 Alanine racemase, N-terminal domain C5P03_18580 PF00437 Type II/IV secretion system protein C5P03_18585 PF00437 Type II/IV secretion system protein C5P03_18590 PF03883 Peroxide stress protein YaaA C5P03_18595 PF00271 Helicase conserved C-terminal domain C5P03_18595 PF00270 DEAD/DEAH box helicase C5P03_18600 PF05175 Methyltransferase small domain C5P03_18605 PF05525 Branched-chain amino acid transport protein C5P03_18620 PF01475 Ferric uptake regulator family C5P03_18625 PF01207 Dihydrouridine synthase (Dus) C5P03_18640 PF00216 Bacterial DNA-binding protein C5P03_18645 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C5P03_18650 PF07238 PilZ domain C5P03_18655 PF18073 Rubredoxin metal binding domain C5P03_18670 PF18429 Domain of unknown function (DUF5609) C5P03_18680 PF01048 Phosphorylase superfamily C5P03_18685 PF01676 Metalloenzyme superfamily C5P03_18690 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C5P03_18690 PF00591 Glycosyl transferase family, a/b domain C5P03_18690 PF02885 Glycosyl transferase family, helical bundle domain C5P03_18695 PF01791 DeoC/LacD family aldolase C5P03_18705 PF01773 Na+ dependent nucleoside transporter N-terminus C5P03_18705 PF07662 Na+ dependent nucleoside transporter C-terminus C5P03_18705 PF07670 Nucleoside recognition C5P03_18710 PF01026 TatD related DNase C5P03_18725 PF00583 Acetyltransferase (GNAT) family C5P03_18730 PF05958 tRNA (Uracil-5-)-methyltransferase C5P03_18730 PF01938 TRAM domain C5P03_18735 PF00909 Ammonium Transporter Family C5P03_18740 PF02661 Fic/DOC family C5P03_18740 PF13784 Fic/DOC family N-terminal C5P03_18765 PF13362 Toprim domain C5P03_18765 PF18818 Metallopeptidase superfamily domain C5P03_18765 PF08401 Domain of unknown function (DUF1738) C5P03_18785 PF08346 AntA/AntB antirepressor C5P03_18785 PF10548 P22AR C-terminal domain C5P03_18805 PF00589 Phage integrase family C5P03_18805 PF13356 Arm DNA-binding domain C5P03_18810 PF02899 Phage integrase, N-terminal SAM-like domain C5P03_18810 PF00589 Phage integrase family C5P03_18815 PF00717 Peptidase S24-like C5P03_18815 PF01381 Helix-turn-helix C5P03_18825 PF06892 Phage regulatory protein CII (CP76) C5P03_19030 PF03739 Lipopolysaccharide export system permease LptF/LptG C5P03_19035 PF03739 Lipopolysaccharide export system permease LptF/LptG C5P03_19040 PF02789 Cytosol aminopeptidase family, N-terminal domain C5P03_19040 PF00883 Cytosol aminopeptidase family, catalytic domain C5P03_19045 PF04364 DNA polymerase III chi subunit, HolC C5P03_19050 PF10458 Valyl tRNA synthetase tRNA binding arm C5P03_19050 PF00133 tRNA synthetases class I (I, L, M and V) C5P03_19050 PF08264 Anticodon-binding domain of tRNA C5P03_19055 PF01595 Cyclin M transmembrane N-terminal domain C5P03_19055 PF00571 CBS domain C5P03_19055 PF03471 Transporter associated domain C5P03_19060 PF09335 SNARE associated Golgi protein C5P03_19065 PF00768 D-alanyl-D-alanine carboxypeptidase C5P03_19090 PF02599 Global regulator protein family C5P03_19095 PF00696 Amino acid kinase family C5P03_19095 PF01842 ACT domain C5P03_19095 PF13840 ACT domain C5P03_19100 PF02272 DHHA1 domain C5P03_19100 PF01411 tRNA synthetases class II (A) C5P03_19100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C5P03_19105 PF02631 RecX family C5P03_19110 PF00154 recA bacterial DNA recombination protein C5P03_19115 PF02464 Competence-damaged protein C5P03_19120 PF04073 Aminoacyl-tRNA editing domain C5P03_19140 PF00155 Aminotransferase class I and II C5P03_19140 PF00392 Bacterial regulatory proteins, gntR family C5P03_19155 PF03788 LrgA family C5P03_19160 PF04172 LrgB-like family C5P03_19175 PF00696 Amino acid kinase family C5P03_19175 PF00742 Homoserine dehydrogenase C5P03_19175 PF03447 Homoserine dehydrogenase, NAD binding domain C5P03_19180 PF01053 Cys/Met metabolism PLP-dependent enzyme C5P03_19185 PF01340 Met Apo-repressor, MetJ C5P03_19190 PF02311 AraC-like ligand binding domain C5P03_19190 PF12833 Helix-turn-helix domain C5P03_19195 PF01588 Putative tRNA binding domain C5P03_19200 PF03222 Tryptophan/tyrosine permease family C5P03_19205 PF00459 Inositol monophosphatase family C5P03_19210 PF00293 NUDIX domain C5P03_19215 PF13419 Haloacid dehalogenase-like hydrolase C5P03_19220 PF00579 tRNA synthetases class I (W and Y) C5P03_19220 PF01479 S4 domain C5P03_19225 PF00196 Bacterial regulatory proteins, luxR family C5P03_19230 PF01203 Type II secretion system (T2SS), protein N C5P03_19235 PF04612 Type II secretion system (T2SS), protein M C5P03_19240 PF05134 Type II secretion system (T2SS), protein L C5P03_19240 PF12693 GspL periplasmic domain C5P03_19245 PF03934 Type II secretion system (T2SS), protein K C5P03_19250 PF07963 Prokaryotic N-terminal methylation motif C5P03_19250 PF11612 Type II secretion system (T2SS), protein J C5P03_19255 PF02501 Type II secretion system (T2SS), protein I C5P03_19255 PF07963 Prokaryotic N-terminal methylation motif C5P03_19260 PF07963 Prokaryotic N-terminal methylation motif C5P03_19260 PF12019 Type II transport protein GspH C5P03_19265 PF07963 Prokaryotic N-terminal methylation motif C5P03_19265 PF08334 Type II secretion system (T2SS), protein G C5P03_19270 PF00482 Type II secretion system (T2SS), protein F C5P03_19275 PF00437 Type II/IV secretion system protein C5P03_19280 PF00263 Bacterial type II and III secretion system protein C5P03_19280 PF03958 Bacterial type II/III secretion system short domain C5P03_19285 PF11356 Type II secretion system protein C C5P03_19290 PF01479 S4 domain C5P03_19295 PF01430 Hsp33 protein C5P03_19300 PF01293 Phosphoenolpyruvate carboxykinase C5P03_19305 PF00392 Bacterial regulatory proteins, gntR family C5P03_19310 PF01321 Creatinase/Prolidase N-terminal domain C5P03_19310 PF00557 Metallopeptidase family M24 C5P03_19315 PF11756 Nitrous oxide-stimulated promoter C5P03_19320 PF00583 Acetyltransferase (GNAT) family C5P03_19325 PF05433 Glycine zipper 2TM domain C5P03_19330 PF02872 5'-nucleotidase, C-terminal domain C5P03_19330 PF00149 Calcineurin-like phosphoesterase C5P03_19335 PF01810 LysE type translocator C5P03_19340 PF03472 Autoinducer binding domain C5P03_19340 PF00196 Bacterial regulatory proteins, luxR family C5P03_19345 PF00765 Autoinducer synthase C5P03_19350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_19350 PF03466 LysR substrate binding domain C5P03_19355 PF17876 Cold shock domain C5P03_19355 PF00773 RNB domain C5P03_19355 PF08206 Ribonuclease B OB domain C5P03_19370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C5P03_19370 PF02378 Phosphotransferase system, EIIC C5P03_19370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C5P03_19375 PF01232 Mannitol dehydrogenase Rossmann domain C5P03_19375 PF08125 Mannitol dehydrogenase C-terminal domain C5P03_19380 PF05068 Mannitol repressor C5P03_19385 PF00999 Sodium/hydrogen exchanger family C5P03_19385 PF02080 TrkA-C domain C5P03_19385 PF03471 Transporter associated domain C5P03_19390 PF00226 DnaJ domain C5P03_19390 PF01556 DnaJ C terminal domain C5P03_19390 PF00684 DnaJ central domain C5P03_19405 PF01544 CorA-like Mg2+ transporter protein C5P03_19410 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C5P03_19425 PF04307 LexA-binding, inner membrane-associated putative hydrolase C5P03_19430 PF01773 Na+ dependent nucleoside transporter N-terminus C5P03_19430 PF07670 Nucleoside recognition C5P03_19430 PF07662 Na+ dependent nucleoside transporter C-terminus C5P03_19435 PF00270 DEAD/DEAH box helicase C5P03_19435 PF00271 Helicase conserved C-terminal domain C5P03_19435 PF03880 DbpA RNA binding domain C5P03_19460 PF01040 UbiA prenyltransferase family C5P03_19465 PF00425 chorismate binding enzyme C5P03_19470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C5P03_19470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C5P03_19470 PF16582 Middle domain of thiamine pyrophosphate C5P03_19475 PF12697 Alpha/beta hydrolase family C5P03_19480 PF00378 Enoyl-CoA hydratase/isomerase C5P03_19485 PF13378 Enolase C-terminal domain-like C5P03_19490 PF00501 AMP-binding enzyme C5P03_19500 PF00419 Fimbrial protein C5P03_19505 PF00419 Fimbrial protein C5P03_19510 PF02753 Pili assembly chaperone PapD, C-terminal domain C5P03_19510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C5P03_19515 PF00577 Outer membrane usher protein C5P03_19515 PF13954 PapC N-terminal domain C5P03_19515 PF13953 PapC C-terminal domain C5P03_19525 PF00419 Fimbrial protein C5P03_19540 PF08453 Peptidase family M9 N-terminal C5P03_19540 PF01752 Collagenase C5P03_19545 PF02698 DUF218 domain C5P03_19550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C5P03_19550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C5P03_19560 PF00561 alpha/beta hydrolase fold C5P03_19565 PF03280 Proteobacterial lipase chaperone protein C5P03_19580 PF00141 Peroxidase C5P03_19585 PF12793 Sugar transport-related sRNA regulator N-term C5P03_19585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5P03_19595 PF01053 Cys/Met metabolism PLP-dependent enzyme C5P03_19605 PF00465 Iron-containing alcohol dehydrogenase C5P03_19620 PF03577 Peptidase family C69 C5P03_19625 PF00106 short chain dehydrogenase C5P03_19645 PF02308 MgtC family C5P03_19650 PF16657 Maltogenic Amylase, C-terminal domain C5P03_19650 PF02903 Alpha amylase, N-terminal ig-like domain C5P03_19650 PF00128 Alpha amylase, catalytic domain C5P03_19665 PF00884 Sulfatase C5P03_19670 PF01037 Lrp/AsnC ligand binding domain C5P03_19680 PF04204 Homoserine O-succinyltransferase C5P03_19685 PF12072 Domain of unknown function (DUF3552) C5P03_19685 PF01966 HD domain C5P03_19685 PF00013 KH domain C5P03_19690 PF00994 Probable molybdopterin binding domain C5P03_19690 PF02464 Competence-damaged protein C5P03_19700 PF00005 ABC transporter C5P03_19720 PF07722 Peptidase C26 C5P03_19730 PF00924 Mechanosensitive ion channel C5P03_19740 PF13419 Haloacid dehalogenase-like hydrolase C5P03_19745 PF02899 Phage integrase, N-terminal SAM-like domain C5P03_19745 PF00589 Phage integrase family C5P03_19755 PF01678 Diaminopimelate epimerase C5P03_19760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C5P03_19760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C5P03_19765 PF01491 Frataxin-like domain C5P03_19785 PF12633 Adenylate cyclase NT domain C5P03_19785 PF01295 Adenylate cyclase, class-I C5P03_19790 PF03900 Porphobilinogen deaminase, C-terminal domain C5P03_19790 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C5P03_19795 PF02602 Uroporphyrinogen-III synthase HemD C5P03_19800 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C5P03_19815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C5P03_19830 PF07715 TonB-dependent Receptor Plug Domain C5P03_19830 PF00593 TonB dependent receptor C5P03_19855 PF08803 Putative mono-oxygenase ydhR C5P03_19865 PF06055 Exopolysaccharide synthesis, ExoD C5P03_19885 PF13036 Peptidoglycan-synthase activator LpoB C5P03_19890 PF00132 Bacterial transferase hexapeptide (six repeats) C5P03_19930 PF06968 Biotin and Thiamin Synthesis associated domain C5P03_19930 PF04055 Radical SAM superfamily C5P03_19935 PF05690 Thiazole biosynthesis protein ThiG C5P03_19945 PF00899 ThiF family C5P03_19950 PF02581 Thiamine monophosphate synthase C5P03_19955 PF13667 ThiC-associated domain C5P03_19955 PF01964 Radical SAM ThiC family C5P03_19960 PF03440 Aerolysin/Pertussis toxin (APT) domain C5P03_19960 PF01117 Aerolysin toxin C5P03_19975 PF00072 Response regulator receiver domain C5P03_19975 PF00486 Transcriptional regulatory protein, C terminal C5P03_19985 PF08443 RimK-like ATP-grasp domain C5P03_19985 PF18030 RimK PreATP-grasp domain C5P03_19990 PF02965 Vitamin B12 dependent methionine synthase, activation domain C5P03_19990 PF02607 B12 binding domain C5P03_19990 PF02310 B12 binding domain C5P03_19990 PF02574 Homocysteine S-methyltransferase C5P03_19990 PF00809 Pterin binding enzyme C5P03_19995 PF00999 Sodium/hydrogen exchanger family C5P03_20010 PF08668 HDOD domain C5P03_20020 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C5P03_20025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_20025 PF13426 PAS domain C5P03_20025 PF08447 PAS fold C5P03_20030 PF08678 Rsbr N terminal C5P03_20030 PF01740 STAS domain C5P03_20035 PF13581 Histidine kinase-like ATPase domain C5P03_20040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C5P03_20040 PF01627 Hpt domain C5P03_20040 PF00512 His Kinase A (phospho-acceptor) domain C5P03_20040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_20040 PF00672 HAMP domain C5P03_20040 PF00072 Response regulator receiver domain C5P03_20045 PF00072 Response regulator receiver domain C5P03_20060 PF01914 MarC family integral membrane protein C5P03_20070 PF01523 Putative modulator of DNA gyrase C5P03_20075 PF00795 Carbon-nitrogen hydrolase C5P03_20085 PF13502 AsmA-like C-terminal region C5P03_20085 PF13116 Protein of unknown function C5P03_20090 PF10150 Ribonuclease E/G family C5P03_20090 PF00575 S1 RNA binding domain C5P03_20095 PF02545 Maf-like protein C5P03_20100 PF04093 rod shape-determining protein MreD C5P03_20105 PF04085 rod shape-determining protein MreC C5P03_20140 PF03958 Bacterial type II/III secretion system short domain C5P03_20140 PF00263 Bacterial type II and III secretion system protein C5P03_20170 PF00563 EAL domain C5P03_20170 PF00990 Diguanylate cyclase, GGDEF domain C5P03_20170 PF17157 Gammaproteobacterial periplasmic sensor domain C5P03_20180 PF01699 Sodium/calcium exchanger protein C5P03_20185 PF00221 Aromatic amino acid lyase C5P03_20190 PF01175 Urocanase Rossmann-like domain C5P03_20190 PF17392 Urocanase C-terminal domain C5P03_20190 PF17391 Urocanase N-terminal domain C5P03_20195 PF00491 Arginase family C5P03_20200 PF01979 Amidohydrolase family C5P03_20205 PF00392 Bacterial regulatory proteins, gntR family C5P03_20205 PF07702 UTRA domain C5P03_20210 PF00484 Carbonic anhydrase C5P03_20215 PF04542 Sigma-70 region 2 C5P03_20215 PF04545 Sigma-70, region 4 C5P03_20215 PF00140 Sigma-70 factor, region 1.2 C5P03_20220 PF18075 FtsX extracellular domain C5P03_20225 PF00005 ABC transporter C5P03_20230 PF00448 SRP54-type protein, GTPase domain C5P03_20230 PF02881 SRP54-type protein, helical bundle domain C5P03_20255 PF00440 Bacterial regulatory proteins, tetR family C5P03_20265 PF13091 PLD-like domain C5P03_20270 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_20270 PF01464 Transglycosylase SLT domain C5P03_20280 PF02416 mttA/Hcf106 family C5P03_20285 PF03466 LysR substrate binding domain C5P03_20285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_20290 PF01914 MarC family integral membrane protein C5P03_20295 PF10678 Protein of unknown function (DUF2492) C5P03_20300 PF00375 Sodium:dicarboxylate symporter family C5P03_20315 PF13533 Biotin-lipoyl like C5P03_20320 PF07690 Major Facilitator Superfamily C5P03_20325 PF07947 YhhN family C5P03_20350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C5P03_20350 PF00326 Prolyl oligopeptidase family C5P03_20365 PF02525 Flavodoxin-like fold C5P03_20370 PF00999 Sodium/hydrogen exchanger family C5P03_20370 PF02254 TrkA-N domain C5P03_20400 PF16916 Dimerisation domain of Zinc Transporter C5P03_20400 PF01545 Cation efflux family C5P03_20415 PF00436 Single-strand binding protein family C5P03_20420 PF00196 Bacterial regulatory proteins, luxR family C5P03_20425 PF00005 ABC transporter C5P03_20425 PF17755 UvrA DNA-binding domain C5P03_20425 PF17760 UvrA interaction domain C5P03_20430 PF00990 Diguanylate cyclase, GGDEF domain C5P03_20430 PF17151 Periplasmic sensor domain C5P03_20435 PF00313 'Cold-shock' DNA-binding domain C5P03_20445 PF00990 Diguanylate cyclase, GGDEF domain C5P03_20450 PF00672 HAMP domain C5P03_20450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_20450 PF00512 His Kinase A (phospho-acceptor) domain C5P03_20455 PF00486 Transcriptional regulatory protein, C terminal C5P03_20455 PF00072 Response regulator receiver domain C5P03_20475 PF00672 HAMP domain C5P03_20475 PF02743 Cache domain C5P03_20475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5P03_20485 PF00990 Diguanylate cyclase, GGDEF domain C5P03_20485 PF00072 Response regulator receiver domain C5P03_20490 PF00543 Nitrogen regulatory protein P-II C5P03_20495 PF00909 Ammonium Transporter Family C5P03_20510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C5P03_20520 PF13538 UvrD-like helicase C-terminal domain C5P03_20525 PF13361 UvrD-like helicase C-terminal domain C5P03_20525 PF12705 PD-(D/E)XK nuclease superfamily C5P03_20525 PF00580 UvrD/REP helicase N-terminal domain C5P03_20530 PF17946 RecC C-terminal domain C5P03_20535 PF07681 DoxX C5P03_20540 PF02678 Pirin C5P03_20540 PF17954 Quercetinase C-terminal cupin domain C5P03_20560 PF00392 Bacterial regulatory proteins, gntR family C5P03_20560 PF07702 UTRA domain C5P03_20575 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_20585 PF08402 TOBE domain C5P03_20585 PF00005 ABC transporter C5P03_20595 PF00990 Diguanylate cyclase, GGDEF domain C5P03_20620 PF06628 Catalase-related immune-responsive C5P03_20620 PF00199 Catalase C5P03_20645 PF00293 NUDIX domain C5P03_20650 PF01594 AI-2E family transporter C5P03_20655 PF02954 Bacterial regulatory protein, Fis family C5P03_20655 PF00158 Sigma-54 interaction domain C5P03_20655 PF00989 PAS fold C5P03_20660 PF00465 Iron-containing alcohol dehydrogenase C5P03_20665 PF00381 PTS HPr component phosphorylation site C5P03_20665 PF00391 PEP-utilising enzyme, mobile domain C5P03_20665 PF05524 PEP-utilising enzyme, N-terminal C5P03_20665 PF03610 PTS system fructose IIA component C5P03_20670 PF02734 DAK2 domain C5P03_20675 PF02733 Dak1 domain C5P03_20685 PF00665 Integrase core domain C5P03_20690 PF01695 IstB-like ATP binding protein C5P03_20740 PF01196 Ribosomal protein L17 C5P03_20745 PF01000 RNA polymerase Rpb3/RpoA insert domain C5P03_20745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C5P03_20745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C5P03_20750 PF01479 S4 domain C5P03_20750 PF00163 Ribosomal protein S4/S9 N-terminal domain C5P03_20755 PF00411 Ribosomal protein S11 C5P03_20760 PF00416 Ribosomal protein S13/S18 C5P03_20765 PF00444 Ribosomal protein L36 C5P03_20770 PF00344 SecY translocase C5P03_20775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C5P03_20780 PF00327 Ribosomal protein L30p/L7e C5P03_20785 PF00333 Ribosomal protein S5, N-terminal domain C5P03_20785 PF03719 Ribosomal protein S5, C-terminal domain C5P03_20790 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C5P03_20795 PF00347 Ribosomal protein L6 C5P03_20800 PF00410 Ribosomal protein S8 C5P03_20805 PF00253 Ribosomal protein S14p/S29e C5P03_20810 PF00281 Ribosomal protein L5 C5P03_20810 PF00673 ribosomal L5P family C-terminus C5P03_20815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C5P03_20820 PF00238 Ribosomal protein L14p/L23e C5P03_20825 PF00366 Ribosomal protein S17 C5P03_20830 PF00831 Ribosomal L29 protein C5P03_20835 PF00252 Ribosomal protein L16p/L10e C5P03_20840 PF00189 Ribosomal protein S3, C-terminal domain C5P03_20840 PF07650 KH domain C5P03_20845 PF00237 Ribosomal protein L22p/L17e C5P03_20850 PF00203 Ribosomal protein S19 C5P03_20855 PF00181 Ribosomal Proteins L2, RNA binding domain C5P03_20855 PF03947 Ribosomal Proteins L2, C-terminal domain C5P03_20860 PF00276 Ribosomal protein L23 C5P03_20865 PF00573 Ribosomal protein L4/L1 family C5P03_20870 PF00297 Ribosomal protein L3 C5P03_20875 PF00338 Ribosomal protein S10p/S20e C5P03_20885 PF00672 HAMP domain C5P03_20885 PF00512 His Kinase A (phospho-acceptor) domain C5P03_20885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_20890 PF00486 Transcriptional regulatory protein, C terminal C5P03_20890 PF00072 Response regulator receiver domain C5P03_20895 PF03449 Transcription elongation factor, N-terminal C5P03_20895 PF01272 Transcription elongation factor, GreA/GreB, C-term C5P03_20900 PF00575 S1 RNA binding domain C5P03_20900 PF17674 HHH domain C5P03_20900 PF09371 Tex-like protein N-terminal domain C5P03_20900 PF16921 Tex protein YqgF-like domain C5P03_20920 PF00561 alpha/beta hydrolase fold C5P03_20925 PF00156 Phosphoribosyl transferase domain C5P03_20930 PF01106 NifU-like domain C5P03_20930 PF01521 Iron-sulphur cluster biosynthesis C5P03_20935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C5P03_20935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C5P03_20940 PF02556 Preprotein translocase subunit SecB C5P03_20945 PF00581 Rhodanese-like domain C5P03_20950 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C5P03_20950 PF01676 Metalloenzyme superfamily C5P03_20955 PF01551 Peptidase family M23 C5P03_20965 PF00356 Bacterial regulatory proteins, lacI family C5P03_20965 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C5P03_20970 PF01081 KDPG and KHG aldolase C5P03_20975 PF00920 Dehydratase family C5P03_20980 PF01202 Shikimate kinase C5P03_20985 PF02447 GntP family permease C5P03_20990 PF13091 PLD-like domain C5P03_20995 PF00271 Helicase conserved C-terminal domain C5P03_20995 PF00270 DEAD/DEAH box helicase C5P03_20995 PF17191 RecG wedge domain C5P03_21005 PF09500 Putative thioesterase (yiiD_Cterm) C5P03_21005 PF00583 Acetyltransferase (GNAT) family C5P03_21020 PF03631 Virulence factor BrkB C5P03_21030 PF00120 Glutamine synthetase, catalytic domain C5P03_21030 PF03951 Glutamine synthetase, beta-Grasp domain C5P03_21040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_21040 PF00989 PAS fold C5P03_21040 PF00512 His Kinase A (phospho-acceptor) domain C5P03_21045 PF00072 Response regulator receiver domain C5P03_21045 PF02954 Bacterial regulatory protein, Fis family C5P03_21045 PF00158 Sigma-54 interaction domain C5P03_21050 PF00962 Adenosine/AMP deaminase C5P03_21055 PF06969 HemN C-terminal domain C5P03_21055 PF04055 Radical SAM superfamily C5P03_21060 PF10675 Protein of unknown function (DUF2489) C5P03_21065 PF04220 Der GTPase activator (YihI) C5P03_21070 PF00034 Cytochrome c C5P03_21075 PF01926 50S ribosome-binding GTPase C5P03_21080 PF07369 Protein of unknown function (DUF1488) C5P03_21085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C5P03_21085 PF01488 Shikimate / quinate 5-dehydrogenase C5P03_21085 PF08501 Shikimate dehydrogenase substrate binding domain C5P03_21090 PF01218 Coproporphyrinogen III oxidase C5P03_21095 PF01300 Telomere recombination C5P03_21100 PF00731 AIR carboxylase C5P03_21105 PF01396 Topoisomerase DNA binding C4 zinc finger C5P03_21110 PF04361 Protein of unknown function (DUF494) C5P03_21115 PF02481 DNA recombination-mediator protein A C5P03_21115 PF17782 DprA winged helix domain C5P03_21120 PF01476 LysM domain C5P03_21125 PF01327 Polypeptide deformylase C5P03_21130 PF02911 Formyl transferase, C-terminal domain C5P03_21130 PF00551 Formyl transferase C5P03_21135 PF01029 NusB family C5P03_21135 PF01189 16S rRNA methyltransferase RsmB/F C5P03_21140 PF02254 TrkA-N domain C5P03_21140 PF02080 TrkA-C domain C5P03_21145 PF02386 Cation transport protein C5P03_21150 PF02646 RmuC family C5P03_21165 PF02082 Transcriptional regulator C5P03_21170 PF00294 pfkB family carbohydrate kinase C5P03_21175 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C5P03_21175 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C5P03_21180 PF00958 GMP synthase C terminal domain C5P03_21180 PF02540 NAD synthase C5P03_21180 PF00117 Glutamine amidotransferase class-I C5P03_21185 PF00171 Aldehyde dehydrogenase family C5P03_21190 PF00202 Aminotransferase class-III C5P03_21195 PF01381 Helix-turn-helix C5P03_21200 PF00171 Aldehyde dehydrogenase family C5P03_21210 PF00892 EamA-like transporter family C5P03_21215 PF12833 Helix-turn-helix domain C5P03_21220 PF01810 LysE type translocator C5P03_21225 PF00690 Cation transporter/ATPase, N-terminus C5P03_21225 PF00689 Cation transporting ATPase, C-terminus C5P03_21230 PF04143 Sulphur transport C5P03_21235 PF01810 LysE type translocator C5P03_21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_21240 PF03466 LysR substrate binding domain C5P03_21260 PF04972 BON domain C5P03_21300 PF00580 UvrD/REP helicase N-terminal domain C5P03_21300 PF13361 UvrD-like helicase C-terminal domain C5P03_21325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_21325 PF03466 LysR substrate binding domain C5P03_21330 PF00107 Zinc-binding dehydrogenase C5P03_21330 PF08240 Alcohol dehydrogenase GroES-like domain C5P03_21335 PF00756 Putative esterase C5P03_21345 PF03781 Sulfatase-modifying factor enzyme 1 C5P03_21345 PF12867 DinB superfamily C5P03_21350 PF13593 SBF-like CPA transporter family (DUF4137) C5P03_21400 PF00132 Bacterial transferase hexapeptide (six repeats) C5P03_21405 PF01367 5'-3' exonuclease, C-terminal SAM fold C5P03_21405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C5P03_21405 PF01612 3'-5' exonuclease C5P03_21405 PF00476 DNA polymerase family A C5P03_21420 PF06005 Cell division protein ZapB C5P03_21430 PF00132 Bacterial transferase hexapeptide (six repeats) C5P03_21430 PF06426 Serine acetyltransferase, N-terminal C5P03_21435 PF01545 Cation efflux family C5P03_21435 PF16916 Dimerisation domain of Zinc Transporter C5P03_21440 PF00072 Response regulator receiver domain C5P03_21440 PF00486 Transcriptional regulatory protein, C terminal C5P03_21445 PF16527 Two-component sensor protein CpxA, periplasmic domain C5P03_21445 PF00672 HAMP domain C5P03_21445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_21445 PF00512 His Kinase A (phospho-acceptor) domain C5P03_21450 PF00588 SpoU rRNA Methylase family C5P03_21460 PF02630 SCO1/SenC C5P03_21470 PF01726 LexA DNA binding domain C5P03_21470 PF00717 Peptidase S24-like C5P03_21475 PF01553 Acyltransferase C5P03_21480 PF01040 UbiA prenyltransferase family C5P03_21485 PF04345 Chorismate lyase C5P03_21490 PF03748 Flagellar basal body-associated protein FliL C5P03_21515 PF00356 Bacterial regulatory proteins, lacI family C5P03_21515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C5P03_21520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C5P03_21530 PF03611 PTS system sugar-specific permease component C5P03_21535 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C5P03_21540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C5P03_21545 PF00535 Glycosyl transferase family 2 C5P03_21550 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C5P03_21555 PF01467 Cytidylyltransferase-like C5P03_21560 PF04393 Protein of unknown function (DUF535) C5P03_21565 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C5P03_21565 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C5P03_21565 PF06827 Zinc finger found in FPG and IleRS C5P03_21575 PF00471 Ribosomal protein L33 C5P03_21580 PF00830 Ribosomal L28 family C5P03_21585 PF04002 RadC-like JAB domain C5P03_21590 PF04127 DNA / pantothenate metabolism flavoprotein C5P03_21590 PF02441 Flavoprotein C5P03_21595 PF00692 dUTPase C5P03_21600 PF00440 Bacterial regulatory proteins, tetR family C5P03_21605 PF00924 Mechanosensitive ion channel C5P03_21605 PF05552 Conserved TM helix C5P03_21620 PF00342 Phosphoglucose isomerase C5P03_21625 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C5P03_21625 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C5P03_21630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5P03_21630 PF03466 LysR substrate binding domain C5P03_21645 PF00583 Acetyltransferase (GNAT) family C5P03_21645 PF13607 Succinyl-CoA ligase like flavodoxin domain C5P03_21645 PF13380 CoA binding domain C5P03_21670 PF12724 Flavodoxin domain C5P03_21675 PF02386 Cation transport protein C5P03_21680 PF09186 Domain of unknown function (DUF1949) C5P03_21680 PF01205 Uncharacterized protein family UPF0029 C5P03_21685 PF00557 Metallopeptidase family M24 C5P03_21690 PF13193 AMP-binding enzyme C-terminal domain C5P03_21690 PF00501 AMP-binding enzyme C5P03_21695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C5P03_21695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C5P03_21695 PF00378 Enoyl-CoA hydratase/isomerase C5P03_21700 PF00108 Thiolase, N-terminal domain C5P03_21700 PF02803 Thiolase, C-terminal domain C5P03_21705 PF00072 Response regulator receiver domain C5P03_21705 PF00486 Transcriptional regulatory protein, C terminal C5P03_21710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_21710 PF00512 His Kinase A (phospho-acceptor) domain C5P03_21710 PF00672 HAMP domain C5P03_21715 PF01547 Bacterial extracellular solute-binding protein C5P03_21725 PF01206 Sulfurtransferase TusA C5P03_21730 PF01042 Endoribonuclease L-PSP C5P03_21735 PF00691 OmpA family C5P03_21735 PF13488 Glycine zipper C5P03_21740 PF03352 Methyladenine glycosylase C5P03_21745 PF02091 Glycyl-tRNA synthetase alpha subunit C5P03_21750 PF02092 Glycyl-tRNA synthetase beta subunit C5P03_21750 PF05746 DALR anticodon binding domain C5P03_21755 PF11008 Protein of unknown function (DUF2846) C5P03_21760 PF01202 Shikimate kinase C5P03_21770 PF13426 PAS domain C5P03_21770 PF00990 Diguanylate cyclase, GGDEF domain C5P03_21770 PF00563 EAL domain C5P03_21775 PF03545 Yersinia virulence determinant (YopE) C5P03_21775 PF03496 ADP-ribosyltransferase exoenzyme C5P03_21780 PF05932 Tir chaperone protein (CesT) family C5P03_21785 PF03222 Tryptophan/tyrosine permease family C5P03_21790 PF12801 4Fe-4S binding domain C5P03_21800 PF18113 Rubredoxin binding C-terminal domain C5P03_21800 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5P03_21805 PF00258 Flavodoxin C5P03_21805 PF00753 Metallo-beta-lactamase superfamily C5P03_21805 PF00301 Rubredoxin C5P03_21810 PF00158 Sigma-54 interaction domain C5P03_21810 PF01590 GAF domain C5P03_21815 PF07702 UTRA domain C5P03_21815 PF00392 Bacterial regulatory proteins, gntR family C5P03_21820 PF00367 phosphotransferase system, EIIB C5P03_21820 PF02378 Phosphotransferase system, EIIC C5P03_21825 PF11975 Family 4 glycosyl hydrolase C-terminal domain C5P03_21825 PF02056 Family 4 glycosyl hydrolase C5P03_21830 PF00356 Bacterial regulatory proteins, lacI family C5P03_21835 PF13458 Periplasmic binding protein C5P03_21840 PF02653 Branched-chain amino acid transport system / permease component C5P03_21845 PF02653 Branched-chain amino acid transport system / permease component C5P03_21845 PF11862 Domain of unknown function (DUF3382) C5P03_21850 PF00005 ABC transporter C5P03_21850 PF12399 Branched-chain amino acid ATP-binding cassette transporter C5P03_21855 PF00005 ABC transporter C5P03_21865 PF01810 LysE type translocator C5P03_21870 PF00581 Rhodanese-like domain C5P03_21875 PF01694 Rhomboid family C5P03_21875 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C5P03_21880 PF12262 Bacterial virulence factor lipase N-terminal C5P03_21885 PF04380 Membrane fusogenic activity C5P03_21890 PF00175 Oxidoreductase NAD-binding domain C5P03_21895 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C5P03_21905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5P03_21905 PF07498 Rho termination factor, N-terminal domain C5P03_21905 PF07497 Rho termination factor, RNA-binding domain C5P03_21910 PF00085 Thioredoxin C5P03_21915 PF00271 Helicase conserved C-terminal domain C5P03_21915 PF00270 DEAD/DEAH box helicase C5P03_21920 PF02541 Ppx/GppA phosphatase family C5P03_21930 PF04445 Putative SAM-dependent methyltransferase C5P03_21935 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5P03_21940 PF03707 Bacterial signalling protein N terminal repeat C5P03_21940 PF00563 EAL domain C5P03_21940 PF00990 Diguanylate cyclase, GGDEF domain C5P03_21945 PF01432 Peptidase family M3 C5P03_21950 PF00490 Delta-aminolevulinic acid dehydratase C5P03_21955 PF01026 TatD related DNase C5P03_21960 PF00902 Sec-independent protein translocase protein (TatC) C5P03_21965 PF02416 mttA/Hcf106 family C5P03_21970 PF02416 mttA/Hcf106 family C5P03_21975 PF03109 ABC1 family C5P03_21980 PF02036 SCP-2 sterol transfer family C5P03_21985 PF01209 ubiE/COQ5 methyltransferase family C5P03_21990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C5P03_22035 PF03544 Gram-negative bacterial TonB protein C-terminal C5P03_22040 PF02472 Biopolymer transport protein ExbD/TolR C5P03_22045 PF01618 MotA/TolQ/ExbB proton channel family C5P03_22050 PF01618 MotA/TolQ/ExbB proton channel family C5P03_22060 PF03472 Autoinducer binding domain C5P03_22060 PF00196 Bacterial regulatory proteins, luxR family C5P03_22085 PF01420 Type I restriction modification DNA specificity domain C5P03_22090 PF01695 IstB-like ATP binding protein C5P03_22095 PF00665 Integrase core domain C5P03_22100 PF01420 Type I restriction modification DNA specificity domain C5P03_22120 PF06527 TniQ C5P03_22120 PF15978 Tn7-like transposition protein D C5P03_22130 PF15978 Tn7-like transposition protein D C5P03_22130 PF06527 TniQ C5P03_22140 PF00665 Integrase core domain C5P03_22145 PF08722 TnsA endonuclease N terminal C5P03_22145 PF08721 TnsA endonuclease C terminal C5P03_22150 PF01380 SIS domain C5P03_22155 PF00455 DeoR C terminal sensor domain C5P03_22155 PF08220 DeoR-like helix-turn-helix domain C5P03_22160 PF00072 Response regulator receiver domain C5P03_22160 PF00486 Transcriptional regulatory protein, C terminal C5P03_22165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5P03_22165 PF00512 His Kinase A (phospho-acceptor) domain C5P03_22165 PF00672 HAMP domain C5P03_22175 PF06123 Inner membrane protein CreD C5P03_22180 PF12804 MobA-like NTP transferase domain C5P03_22180 PF00132 Bacterial transferase hexapeptide (six repeats) C5P03_22180 PF14602 Hexapeptide repeat of succinyl-transferase C5P03_22185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C5P03_22185 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C5P03_22190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5P03_22190 PF02874 ATP synthase alpha/beta family, beta-barrel domain C5P03_22195 PF00231 ATP synthase C5P03_22200 PF02874 ATP synthase alpha/beta family, beta-barrel domain C5P03_22200 PF00306 ATP synthase alpha/beta chain, C terminal domain C5P03_22200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5P03_22205 PF00213 ATP synthase delta (OSCP) subunit C5P03_22210 PF00430 ATP synthase B/B' CF(0) C5P03_22215 PF00137 ATP synthase subunit C C5P03_22220 PF00119 ATP synthase A chain C5P03_22225 PF03899 ATP synthase I chain C5P03_22230 PF17762 HTH domain found in ParB protein C5P03_22230 PF02195 ParB-like nuclease domain C5P03_22235 PF13614 AAA domain C5P03_22240 PF02527 rRNA small subunit methyltransferase G C5P03_22245 PF13932 GidA associated domain C5P03_22245 PF01134 Glucose inhibited division protein A C5P03_22250 PF00258 Flavodoxin C5P03_22255 PF00593 TonB dependent receptor C5P03_22255 PF07715 TonB-dependent Receptor Plug Domain C5P03_22260 PF00005 ABC transporter C5P03_22265 PF00005 ABC transporter C5P03_22270 PF01497 Periplasmic binding protein C5P03_22275 PF01032 FecCD transport family C5P03_22280 PF07715 TonB-dependent Receptor Plug Domain C5P03_22280 PF00593 TonB dependent receptor C5P03_22285 PF01497 Periplasmic binding protein C5P03_22290 PF00005 ABC transporter C5P03_22295 PF01032 FecCD transport family C5P03_22300 PF01032 FecCD transport family C5P03_22305 PF00005 ABC transporter C5P03_22310 PF08021 Siderophore-interacting FAD-binding domain C5P03_22310 PF04954 Siderophore-interacting protein C5P03_22310 PF00005 ABC transporter C5P03_22310 PF00664 ABC transporter transmembrane region C5P03_22320 PF13193 AMP-binding enzyme C-terminal domain C5P03_22320 PF00975 Thioesterase domain C5P03_22320 PF00550 Phosphopantetheine attachment site C5P03_22320 PF00501 AMP-binding enzyme C5P03_22320 PF00668 Condensation domain C5P03_22325 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C5P03_22330 PF00501 AMP-binding enzyme C5P03_22330 PF00550 Phosphopantetheine attachment site C5P03_22330 PF00668 Condensation domain C5P03_22340 PF00282 Pyridoxal-dependent decarboxylase conserved domain C5P03_22345 PF01926 50S ribosome-binding GTPase C5P03_22345 PF12631 MnmE helical domain C5P03_22345 PF10396 GTP-binding protein TrmE N-terminus C5P03_22350 PF02096 60Kd inner membrane protein C5P03_22350 PF14849 YidC periplasmic domain C5P03_22355 PF01809 Putative membrane protein insertion efficiency factor C5P03_22360 PF00825 Ribonuclease P C5P03_22365 PF00468 Ribosomal protein L34 C5P03_22375 PF00528 Binding-protein-dependent transport system inner membrane component C5P03_22380 PF00497 Bacterial extracellular solute-binding proteins, family 3