locus-tag class description LJF99_00010 IPR030935 Phage portal protein PBSX family, Proteobacteria LJF99_00010 IPR006430 Phage portal protein PBSX family LJF99_00065 IPR009679 Bacteriophage 186, CII LJF99_00080 IPR039418 LexA-like LJF99_00080 IPR036286 LexA/Signal peptidase-like superfamily LJF99_00080 IPR015927 Peptidase S24/S26A/S26B/S26C LJF99_00090 IPR023009 Tyrosine recombinase XerC/XerD LJF99_00090 IPR011931 Tyrosine recombinase XerC LJF99_00090 IPR004107 Integrase, SAM-like, N-terminal LJF99_00090 IPR010998 Integrase/recombinase, N-terminal LJF99_00090 IPR002104 Integrase, catalytic domain LJF99_00090 IPR013762 Integrase-like, catalytic domain superfamily LJF99_00090 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_00100 IPR036390 Winged helix DNA-binding domain superfamily LJF99_00100 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_00100 IPR000847 Transcription regulator HTH, LysR LJF99_00100 IPR005119 LysR, substrate-binding LJF99_00105 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_00105 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_00105 IPR036291 NAD(P)-binding domain superfamily LJF99_00120 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LJF99_00120 IPR010138 UDP-2,3-diacylglucosamine hydrolase LJF99_00120 IPR029052 Metallo-dependent phosphatase-like LJF99_00130 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain LJF99_00130 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site LJF99_00130 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase LJF99_00130 IPR029000 Cyclophilin-like domain superfamily LJF99_00135 IPR015803 Cysteine-tRNA ligase LJF99_00135 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase LJF99_00135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_00135 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LJF99_00135 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR LJF99_00135 IPR032678 tRNA synthetases class I, catalytic domain LJF99_00140 IPR009057 Homeobox-like domain superfamily LJF99_00140 IPR012337 Ribonuclease H-like superfamily LJF99_00140 IPR038717 Tc1-like transposase, DDE domain LJF99_00140 IPR025959 Winged helix-turn helix domain LJF99_00190 IPR001727 Gdt1 family LJF99_00195 IPR005872 Archaeal/bacterial translation initiation factor SUI1 LJF99_00195 IPR036877 SUI1 domain superfamily LJF99_00195 IPR001950 SUI1 domain LJF99_00205 IPR003373 Ferrous iron transport protein B LJF99_00205 IPR011640 Ferrous iron transport protein B, C-terminal LJF99_00205 IPR030389 FeoB-type guanine nucleotide-binding (G) domain LJF99_00205 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LJF99_00205 IPR006073 GTP binding domain LJF99_00205 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00220 IPR005835 Nucleotidyl transferase domain LJF99_00220 IPR011004 Trimeric LpxA-like superfamily LJF99_00220 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_00220 IPR011831 Glucose-1-phosphate adenylyltransferase LJF99_00220 IPR005836 ADP-glucose pyrophosphorylase, conserved site LJF99_00220 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial LJF99_00225 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00225 IPR006321 Pilus retraction protein PilT LJF99_00225 IPR001482 Type II/IV secretion system protein LJF99_00235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_00235 IPR035965 PAS domain superfamily LJF99_00235 IPR000700 PAS-associated, C-terminal LJF99_00235 IPR001789 Signal transduction response regulator, receiver domain LJF99_00235 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_00235 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_00235 IPR013767 PAS fold LJF99_00235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_00235 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_00235 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_00235 IPR005467 Histidine kinase domain LJF99_00235 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_00235 IPR011006 CheY-like superfamily LJF99_00235 IPR036641 HPT domain superfamily LJF99_00235 IPR000014 PAS domain LJF99_00240 IPR037294 ABC transporter, BtuC-like LJF99_00240 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC LJF99_00240 IPR000522 ABC transporter, permease protein, BtuC-like LJF99_00245 IPR003593 AAA+ ATPase domain LJF99_00245 IPR003439 ABC transporter-like LJF99_00245 IPR023693 ABC transporter, vitamin B12, BtuD LJF99_00245 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00250 IPR013785 Aldolase-type TIM barrel LJF99_00250 IPR006218 DAHP synthetase I/KDSA LJF99_00250 IPR006219 DHAP synthase, class 1 LJF99_00255 IPR000829 DAGK family LJF99_00255 IPR033718 Diacylglycerol kinase, prokaryotic LJF99_00255 IPR036945 Diacylglycerol kinase (DAGK) superfamily LJF99_00260 IPR002912 ACT domain LJF99_00260 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_00260 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LJF99_00260 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LJF99_00260 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LJF99_00260 IPR036291 NAD(P)-binding domain superfamily LJF99_00265 IPR037171 NagB/RpiA transferase-like LJF99_00265 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup LJF99_00265 IPR004788 Ribose 5-phosphate isomerase, type A LJF99_00270 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily LJF99_00270 IPR037171 NagB/RpiA transferase-like LJF99_00270 IPR002698 5-formyltetrahydrofolate cyclo-ligase LJF99_00290 IPR022664 Dihydrodipicolinate reductase, conserved site LJF99_00290 IPR022663 Dihydrodipicolinate reductase, C-terminal LJF99_00290 IPR000846 Dihydrodipicolinate reductase, N-terminal LJF99_00290 IPR023940 Dihydrodipicolinate reductase LJF99_00290 IPR036291 NAD(P)-binding domain superfamily LJF99_00295 IPR006274 Carbamoyl-phosphate synthase, small subunit LJF99_00295 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain LJF99_00295 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily LJF99_00295 IPR029062 Class I glutamine amidotransferase-like LJF99_00295 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain LJF99_00295 IPR017926 Glutamine amidotransferase LJF99_00300 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LJF99_00300 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain LJF99_00300 IPR011607 Methylglyoxal synthase-like domain LJF99_00300 IPR036914 Methylglyoxal synthase-like domain superfamily LJF99_00300 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain LJF99_00300 IPR016185 Pre-ATP-grasp domain superfamily LJF99_00300 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily LJF99_00300 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain LJF99_00300 IPR006275 Carbamoyl-phosphate synthase, large subunit LJF99_00300 IPR011761 ATP-grasp fold LJF99_00305 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain LJF99_00305 IPR013785 Aldolase-type TIM barrel LJF99_00305 IPR005668 2-isopropylmalate synthase LJF99_00305 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily LJF99_00305 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site LJF99_00305 IPR039371 LeuA, N-terminal catalytic TIM barrel domain LJF99_00305 IPR000891 Pyruvate carboxyltransferase LJF99_00310 IPR011673 Protein of unknown function DUF1615 LJF99_00320 IPR038717 Tc1-like transposase, DDE domain LJF99_00320 IPR012337 Ribonuclease H-like superfamily LJF99_00320 IPR025959 Winged helix-turn helix domain LJF99_00320 IPR009057 Homeobox-like domain superfamily LJF99_00330 IPR011528 Nuclease-related domain, NERD LJF99_00345 IPR016181 Acyl-CoA N-acyltransferase LJF99_00345 IPR000182 GNAT domain LJF99_00350 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_00350 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_00350 IPR001650 Helicase, C-terminal LJF99_00350 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_00350 IPR028622 ATP-dependent RNA helicase RhlE LJF99_00350 IPR011545 DEAD/DEAH box helicase domain LJF99_00350 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00375 IPR009061 Putative DNA-binding domain superfamily LJF99_00375 IPR010211 Redox-sensitive transcriptional activator SoxR LJF99_00375 IPR000551 MerR-type HTH domain LJF99_00375 IPR015358 Transcription regulator MerR, DNA binding LJF99_00390 IPR028261 Dihydroprymidine dehydrogenase domain II LJF99_00390 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_00390 IPR023753 FAD/NAD(P)-binding domain LJF99_00390 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 LJF99_00390 IPR009051 Alpha-helical ferredoxin LJF99_00390 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_00395 IPR013785 Aldolase-type TIM barrel LJF99_00395 IPR017932 Glutamine amidotransferase type 2 domain LJF99_00395 IPR002489 Glutamate synthase, alpha subunit, C-terminal LJF99_00395 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily LJF99_00395 IPR006982 Glutamate synthase, central-N LJF99_00395 IPR002932 Glutamate synthase domain LJF99_00395 IPR029055 Nucleophile aminohydrolases, N-terminal LJF99_00400 IPR005911 Protein YhcC-like LJF99_00400 IPR039661 ELP3/YhcC LJF99_00400 IPR006638 Elp3/MiaB/NifB LJF99_00400 IPR023404 Radical SAM, alpha/beta horseshoe LJF99_00400 IPR032432 Radical SAM, C-terminal extension LJF99_00400 IPR007197 Radical SAM LJF99_00405 IPR039421 Type I protein exporter LJF99_00405 IPR003593 AAA+ ATPase domain LJF99_00405 IPR011527 ABC transporter type 1, transmembrane domain LJF99_00405 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_00405 IPR003439 ABC transporter-like LJF99_00405 IPR017871 ABC transporter, conserved site LJF99_00405 IPR010132 ATPase, type I secretion system, HlyB LJF99_00405 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00405 IPR005074 Peptidase C39, bacteriocin processing LJF99_00405 IPR039395 Peptidase C39-like A LJF99_00410 IPR006144 Secretion protein HlyD, conserved site LJF99_00410 IPR010129 Type I secretion membrane fusion protein, HlyD family LJF99_00485 IPR010758 Trans-2-enoyl-CoA reductase LJF99_00485 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative LJF99_00485 IPR024906 Enoyl reductase FAD binding domain LJF99_00490 IPR018385 C4-dicarboxylate anaerobic carrier-like LJF99_00495 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_00495 IPR004839 Aminotransferase, class I/classII LJF99_00495 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_00495 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_00505 IPR036249 Thioredoxin-like superfamily LJF99_00505 IPR011902 Glutaredoxin, GrxA LJF99_00505 IPR002109 Glutaredoxin LJF99_00505 IPR014025 Glutaredoxin subgroup LJF99_00510 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C LJF99_00510 IPR012338 Beta-lactamase/transpeptidase-like LJF99_00515 IPR011332 Zinc-binding ribosomal protein LJF99_00515 IPR001650 Helicase, C-terminal LJF99_00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00515 IPR006935 Helicase/UvrB, N-terminal LJF99_00515 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_00520 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_00525 IPR011223 Uncharacterised conserved protein UCP028770 LJF99_00530 IPR003706 CstA, N-terminal domain LJF99_00535 IPR011006 CheY-like superfamily LJF99_00535 IPR007492 LytTR DNA-binding domain LJF99_00535 IPR001789 Signal transduction response regulator, receiver domain LJF99_00540 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LJF99_00540 IPR003018 GAF domain LJF99_00540 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_00540 IPR010559 Signal transduction histidine kinase, internal region LJF99_00545 IPR006675 HDIG domain LJF99_00545 IPR037522 HD-GYP domain LJF99_00545 IPR003607 HD/PDEase domain LJF99_00545 IPR021812 Protein of unknown function DUF3391 LJF99_00545 IPR006674 HD domain LJF99_00550 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase LJF99_00550 IPR015590 Aldehyde dehydrogenase domain LJF99_00550 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_00550 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_00550 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_00550 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LJF99_00550 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LJF99_00550 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain LJF99_00550 IPR039697 Iron-type alcohol dehydrogenase-like LJF99_00560 IPR002771 Multiple antibiotic resistance (MarC)-related LJF99_00565 IPR000914 Solute-binding protein family 5 domain LJF99_00565 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_00565 IPR039424 Solute-binding protein family 5 LJF99_00565 IPR023765 Solute-binding protein family 5, conserved site LJF99_00570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_00570 IPR035906 MetI-like superfamily LJF99_00575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_00575 IPR035906 MetI-like superfamily LJF99_00575 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LJF99_00580 IPR003593 AAA+ ATPase domain LJF99_00580 IPR003439 ABC transporter-like LJF99_00580 IPR017871 ABC transporter, conserved site LJF99_00580 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LJF99_00580 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00590 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00590 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LJF99_00590 IPR003439 ABC transporter-like LJF99_00590 IPR003593 AAA+ ATPase domain LJF99_00590 IPR017871 ABC transporter, conserved site LJF99_00595 IPR005496 Integral membrane protein TerC LJF99_00595 IPR022369 Integral membrane protein TerC, riboswitch-linked LJF99_00600 IPR001608 Alanine racemase, N-terminal LJF99_00600 IPR029066 PLP-binding barrel LJF99_00600 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site LJF99_00600 IPR011079 Alanine racemase, C-terminal LJF99_00600 IPR000821 Alanine racemase LJF99_00600 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LJF99_00610 IPR023954 C4-dicarboxylate transport protein LJF99_00610 IPR001991 Sodium:dicarboxylate symporter LJF99_00610 IPR018107 Sodium:dicarboxylate symporter, conserved site LJF99_00610 IPR036458 Sodium:dicarboxylate symporter superfamily LJF99_00625 IPR011059 Metal-dependent hydrolase, composite domain superfamily LJF99_00625 IPR002195 Dihydroorotase, conserved site LJF99_00625 IPR006680 Amidohydrolase-related LJF99_00625 IPR032466 Metal-dependent hydrolase LJF99_00625 IPR004722 Dihydroorotase LJF99_00635 IPR004090 Chemotaxis methyl-accepting receptor LJF99_00635 IPR003660 HAMP domain LJF99_00635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_00640 IPR036265 HIT-like superfamily LJF99_00640 IPR011146 HIT-like domain LJF99_00640 IPR001310 Histidine triad (HIT) protein LJF99_00640 IPR019808 Histidine triad, conserved site LJF99_00675 IPR027398 SecD export protein N-terminal TM domain LJF99_00675 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LJF99_00675 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LJF99_00675 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LJF99_00675 IPR005791 Protein translocase subunit SecD LJF99_00680 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LJF99_00680 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LJF99_00680 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LJF99_00680 IPR005665 Protein-export membrane protein SecF, bacterial LJF99_00685 IPR004090 Chemotaxis methyl-accepting receptor LJF99_00685 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_00685 IPR000014 PAS domain LJF99_00685 IPR000700 PAS-associated, C-terminal LJF99_00685 IPR035965 PAS domain superfamily LJF99_00685 IPR013655 PAS fold-3 LJF99_00685 IPR001610 PAC motif LJF99_00700 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 LJF99_00700 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LJF99_00705 IPR010227 NADH-quinone oxidoreductase, chain M/4 LJF99_00705 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LJF99_00705 IPR003918 NADH:ubiquinone oxidoreductase LJF99_00710 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 LJF99_00710 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup LJF99_00710 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LJF99_00710 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LJF99_00715 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like LJF99_00715 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K LJF99_00720 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ LJF99_00720 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 LJF99_00725 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_00725 IPR010226 NADH-quinone oxidoreductase, chain I LJF99_00725 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_00730 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H LJF99_00730 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site LJF99_00735 IPR010228 NADH:ubiquinone oxidoreductase, subunit G LJF99_00735 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site LJF99_00735 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site LJF99_00735 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LJF99_00735 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding LJF99_00735 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_00735 IPR006656 Molybdopterin oxidoreductase LJF99_00735 IPR009010 Aspartate decarboxylase-like domain superfamily LJF99_00735 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_00740 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily LJF99_00740 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily LJF99_00740 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain LJF99_00740 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain LJF99_00740 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site LJF99_00740 IPR011537 NADH ubiquinone oxidoreductase, F subunit LJF99_00745 IPR002023 NADH-quinone oxidoreductase subunit E-like LJF99_00745 IPR042128 NuoE domain LJF99_00745 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal LJF99_00745 IPR036249 Thioredoxin-like superfamily LJF99_00750 IPR029014 [NiFe]-hydrogenase, large subunit LJF99_00750 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H LJF99_00750 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site LJF99_00750 IPR010218 NADH dehydrogenase, subunit C LJF99_00750 IPR023062 NADH dehydrogenase, subunit CD LJF99_00750 IPR001135 NADH-quinone oxidoreductase, subunit D LJF99_00750 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit LJF99_00750 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily LJF99_00750 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily LJF99_00755 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit LJF99_00755 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit LJF99_00760 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid LJF99_00760 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 LJF99_00760 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily LJF99_00765 IPR025713 Motility protein B, N-terminal domain LJF99_00765 IPR006665 OmpA-like domain LJF99_00765 IPR036737 OmpA-like domain superfamily LJF99_00770 IPR000540 Flagellar motor protein MotA, conserved site LJF99_00770 IPR002898 MotA/TolQ/ExbB proton channel LJF99_00785 IPR007621 TPM domain LJF99_00795 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LJF99_00795 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase LJF99_00800 IPR035906 MetI-like superfamily LJF99_00800 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_00800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_00805 IPR018313 Solute-binding protein family 3, conserved site LJF99_00805 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_00805 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LJF99_00805 IPR001320 Ionotropic glutamate receptor LJF99_00810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_00810 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_00810 IPR035906 MetI-like superfamily LJF99_00815 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LJF99_00815 IPR003439 ABC transporter-like LJF99_00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00815 IPR003593 AAA+ ATPase domain LJF99_00815 IPR017871 ABC transporter, conserved site LJF99_00825 IPR000504 RNA recognition motif domain LJF99_00825 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LJF99_00825 IPR035979 RNA-binding domain superfamily LJF99_00830 IPR020471 Aldo/keto reductase LJF99_00830 IPR036812 NADP-dependent oxidoreductase domain superfamily LJF99_00830 IPR023210 NADP-dependent oxidoreductase domain LJF99_00840 IPR036291 NAD(P)-binding domain superfamily LJF99_00840 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_00845 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_00845 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase LJF99_00845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_00845 IPR023603 Threonine aldolase LJF99_00845 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_00855 IPR011006 CheY-like superfamily LJF99_00855 IPR003607 HD/PDEase domain LJF99_00855 IPR037522 HD-GYP domain LJF99_00855 IPR001789 Signal transduction response regulator, receiver domain LJF99_00860 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_00860 IPR005119 LysR, substrate-binding LJF99_00860 IPR000847 Transcription regulator HTH, LysR LJF99_00860 IPR036390 Winged helix DNA-binding domain superfamily LJF99_00870 IPR009057 Homeobox-like domain superfamily LJF99_00870 IPR012337 Ribonuclease H-like superfamily LJF99_00870 IPR038717 Tc1-like transposase, DDE domain LJF99_00870 IPR025959 Winged helix-turn helix domain LJF99_00875 IPR000160 GGDEF domain LJF99_00875 IPR005330 MHYT domain LJF99_00875 IPR001633 EAL domain LJF99_00875 IPR029787 Nucleotide cyclase LJF99_00875 IPR035919 EAL domain superfamily LJF99_00880 IPR000415 Nitroreductase-like LJF99_00880 IPR016446 Flavin oxidoreductase Frp family LJF99_00880 IPR029479 Nitroreductase LJF99_00895 IPR036259 MFS transporter superfamily LJF99_00895 IPR011701 Major facilitator superfamily LJF99_00895 IPR020846 Major facilitator superfamily domain LJF99_00895 IPR005829 Sugar transporter, conserved site LJF99_00900 IPR005119 LysR, substrate-binding LJF99_00900 IPR000847 Transcription regulator HTH, LysR LJF99_00900 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_00900 IPR036390 Winged helix DNA-binding domain superfamily LJF99_00905 IPR005119 LysR, substrate-binding LJF99_00905 IPR000847 Transcription regulator HTH, LysR LJF99_00905 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_00905 IPR036390 Winged helix DNA-binding domain superfamily LJF99_00910 IPR000926 GTP cyclohydrolase II, RibA LJF99_00910 IPR036144 RibA-like superfamily LJF99_00910 IPR032677 GTP cyclohydrolase II LJF99_00915 IPR011994 Cytidylate kinase domain LJF99_00915 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00915 IPR003136 Cytidylate kinase LJF99_00920 IPR003029 S1 domain LJF99_00920 IPR022967 RNA-binding domain, S1 LJF99_00920 IPR000110 Ribosomal protein S1 LJF99_00920 IPR012340 Nucleic acid-binding, OB-fold LJF99_00925 IPR000119 Histone-like DNA-binding protein LJF99_00925 IPR005685 Integration host factor, beta subunit LJF99_00925 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LJF99_00925 IPR020816 Histone-like DNA-binding protein, conserved site LJF99_00935 IPR019734 Tetratricopeptide repeat LJF99_00935 IPR041166 LapB, rubredoxin metal binding domain LJF99_00935 IPR013026 Tetratricopeptide repeat-containing domain LJF99_00935 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_00935 IPR030865 Lipopolysaccharide assembly protein B LJF99_00940 IPR013785 Aldolase-type TIM barrel LJF99_00940 IPR014732 Orotidine 5'-phosphate decarboxylase LJF99_00940 IPR018089 Orotidine 5'-phosphate decarboxylase, active site LJF99_00940 IPR001754 Orotidine 5'-phosphate decarboxylase domain LJF99_00940 IPR011060 Ribulose-phosphate binding barrel LJF99_00955 IPR018317 Queuosine biosynthesis protein QueC LJF99_00955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_00960 IPR007197 Radical SAM LJF99_00960 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria LJF99_00960 IPR024924 7-carboxy-7-deazaguanine synthase-like LJF99_00960 IPR013785 Aldolase-type TIM barrel LJF99_00965 IPR024530 Putative quorum-sensing-regulated virulence factor LJF99_00970 IPR016030 Cobalamin adenosyltransferase-like LJF99_00970 IPR036451 Cobalamin adenosyltransferase-like superfamily LJF99_00970 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type LJF99_00975 IPR027444 Histone-like protein H-NS, C-terminal domain LJF99_00975 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LJF99_00975 IPR001801 Histone-like protein H-NS LJF99_00975 IPR027454 Histone-like protein H-NS, N-terminal LJF99_00985 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LJF99_00990 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_00990 IPR001267 Thymidine kinase LJF99_00990 IPR020633 Thymidine kinase, conserved site LJF99_01000 IPR019660 Putative sensory transduction regulator YbjN LJF99_01015 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site LJF99_01015 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LJF99_01015 IPR011079 Alanine racemase, C-terminal LJF99_01015 IPR000821 Alanine racemase LJF99_01015 IPR029066 PLP-binding barrel LJF99_01015 IPR001608 Alanine racemase, N-terminal LJF99_01020 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit LJF99_01020 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LJF99_01020 IPR006311 Twin-arginine translocation pathway, signal sequence LJF99_01020 IPR001821 [NiFe]-hydrogenase, small subunit LJF99_01020 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily LJF99_01020 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily LJF99_01020 IPR027394 Cytochrome-c3 hydrogenase, C-terminal LJF99_01025 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LJF99_01025 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_01025 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_01030 IPR005614 NrfD family LJF99_01035 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site LJF99_01035 IPR029014 [NiFe]-hydrogenase, large subunit LJF99_01035 IPR001501 Nickel-dependent hydrogenase, large subunit LJF99_01040 IPR004419 Peptidase A31, hydrogenase expression/formation protein LJF99_01040 IPR023430 Peptidase HybD-like domain superfamily LJF99_01040 IPR000671 Peptidase A31 family LJF99_01045 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE LJF99_01045 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily LJF99_01050 IPR023765 Solute-binding protein family 5, conserved site LJF99_01050 IPR000914 Solute-binding protein family 5 domain LJF99_01050 IPR039424 Solute-binding protein family 5 LJF99_01050 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_01055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_01055 IPR035906 MetI-like superfamily LJF99_01060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_01060 IPR035906 MetI-like superfamily LJF99_01060 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LJF99_01065 IPR003593 AAA+ ATPase domain LJF99_01065 IPR003439 ABC transporter-like LJF99_01065 IPR017871 ABC transporter, conserved site LJF99_01065 IPR015857 ABC transporter, nickel import, NikD LJF99_01065 IPR014138 Nickel import ATP-binding protein NikD LJF99_01065 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01070 IPR013611 Transport-associated OB, type 2 LJF99_01070 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01070 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit LJF99_01070 IPR017871 ABC transporter, conserved site LJF99_01070 IPR003439 ABC transporter-like LJF99_01070 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA LJF99_01070 IPR008995 Molybdate/tungstate binding, C-terminal LJF99_01070 IPR003593 AAA+ ATPase domain LJF99_01075 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LJF99_01075 IPR004392 Hydrogenase maturation factor HypB LJF99_01075 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01080 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site LJF99_01080 IPR000688 Hydrogenase maturation factor HypA/HybF LJF99_01085 IPR036921 PurM-like, N-terminal domain superfamily LJF99_01085 IPR016188 PurM-like, N-terminal domain LJF99_01085 IPR010918 PurM-like, C-terminal domain LJF99_01085 IPR011854 Carbamoyl dehydratase HypE LJF99_01085 IPR036676 PurM-like, C-terminal domain superfamily LJF99_01090 IPR002780 Hydrogenase formation HypD protein LJF99_01090 IPR042244 HypD, domain 1 LJF99_01090 IPR042243 HypD, domain 2 LJF99_01095 IPR037254 HupF/HypC superfamily LJF99_01095 IPR019812 Hydrogenase assembly chaperone, conserved site LJF99_01095 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LJF99_01100 IPR011125 Zinc finger, HypF-type LJF99_01100 IPR041440 HypF, Kae1-like domain LJF99_01100 IPR006070 YrdC-like domain LJF99_01100 IPR004421 Carbamoyltransferase, HypF-type LJF99_01100 IPR017968 Acylphosphatase, conserved site LJF99_01100 IPR036046 Acylphosphatase-like domain superfamily LJF99_01100 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LJF99_01100 IPR001792 Acylphosphatase-like domain LJF99_01105 IPR004161 Translation elongation factor EFTu-like, domain 2 LJF99_01105 IPR015190 Translation elongation factor SelB, winged helix, type 2 LJF99_01105 IPR015191 Translation elongation factor SelB, winged helix, type 3 LJF99_01105 IPR031157 Tr-type G domain, conserved site LJF99_01105 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01105 IPR005225 Small GTP-binding protein domain LJF99_01105 IPR000795 Transcription factor, GTP-binding domain LJF99_01105 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_01105 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LJF99_01105 IPR004535 Translation elongation factor, selenocysteine-specific LJF99_01105 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_01105 IPR036390 Winged helix DNA-binding domain superfamily LJF99_01110 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_01110 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain LJF99_01110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_01110 IPR018319 L-seryl-tRNA selenium transferase-like LJF99_01110 IPR004534 L-seryl-tRNA(Sec) selenium transferase LJF99_01120 IPR023430 Peptidase HybD-like domain superfamily LJF99_01120 IPR000671 Peptidase A31 family LJF99_01120 IPR004420 Peptidase A31, hydrogenase maturation protease HycI LJF99_01125 IPR010005 Formate hydrogenlyase maturation HycH LJF99_01130 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit LJF99_01130 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit LJF99_01135 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_01135 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_01135 IPR010226 NADH-quinone oxidoreductase, chain I LJF99_01140 IPR001501 Nickel-dependent hydrogenase, large subunit LJF99_01140 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site LJF99_01140 IPR029014 [NiFe]-hydrogenase, large subunit LJF99_01140 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily LJF99_01140 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily LJF99_01140 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit LJF99_01140 IPR001135 NADH-quinone oxidoreductase, subunit D LJF99_01145 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H LJF99_01145 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site LJF99_01150 IPR003918 NADH:ubiquinone oxidoreductase LJF99_01150 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LJF99_01155 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_01155 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_01160 IPR023051 Potassium uptake protein, low affinity, Kup LJF99_01160 IPR003855 Potassium transporter LJF99_01175 IPR011646 KAP family P-loop domain LJF99_01175 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_01180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_01195 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_01195 IPR025944 Sigma-54 interaction domain, conserved site LJF99_01195 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_01195 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01195 IPR009057 Homeobox-like domain superfamily LJF99_01195 IPR003593 AAA+ ATPase domain LJF99_01195 IPR002197 DNA binding HTH domain, Fis-type LJF99_01195 IPR029016 GAF-like domain superfamily LJF99_01195 IPR003018 GAF domain LJF99_01200 IPR016193 Cytidine deaminase-like LJF99_01200 IPR003786 Sulfur carrier protein FdhD LJF99_01205 IPR000093 DNA recombination protein RecR LJF99_01205 IPR023627 Recombination protein RecR LJF99_01205 IPR023628 Recombination protein RecR, C4-type zinc finger LJF99_01205 IPR006171 TOPRIM domain LJF99_01205 IPR034137 RecR, TOPRIM domain LJF99_01210 IPR020575 Heat shock protein Hsp90, N-terminal LJF99_01210 IPR001404 Heat shock protein Hsp90 family LJF99_01210 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_01210 IPR019805 Heat shock protein Hsp90, conserved site LJF99_01210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_01210 IPR037196 HSP90, C-terminal domain LJF99_01210 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_01215 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01215 IPR007862 Adenylate kinase, active site lid domain LJF99_01215 IPR000850 Adenylate kinase/UMP-CMP kinase LJF99_01215 IPR006259 Adenylate kinase subfamily LJF99_01215 IPR033690 Adenylate kinase, conserved site LJF99_01220 IPR001015 Ferrochelatase LJF99_01220 IPR019772 Ferrochelatase, active site LJF99_01220 IPR033659 Ferrochelatase, N-terminal LJF99_01220 IPR033644 Ferrochelatase, C-terminal LJF99_01225 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily LJF99_01225 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein LJF99_01230 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LJF99_01230 IPR011611 Carbohydrate kinase PfkB LJF99_01230 IPR029056 Ribokinase-like LJF99_01235 IPR033480 Single Cache domain 2 LJF99_01235 IPR003660 HAMP domain LJF99_01235 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_01235 IPR004090 Chemotaxis methyl-accepting receptor LJF99_01250 IPR001633 EAL domain LJF99_01250 IPR035919 EAL domain superfamily LJF99_01250 IPR000160 GGDEF domain LJF99_01250 IPR005330 MHYT domain LJF99_01250 IPR029787 Nucleotide cyclase LJF99_01250 IPR035965 PAS domain superfamily LJF99_01255 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_01255 IPR011831 Glucose-1-phosphate adenylyltransferase LJF99_01255 IPR005836 ADP-glucose pyrophosphorylase, conserved site LJF99_01255 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial LJF99_01255 IPR005835 Nucleotidyl transferase domain LJF99_01255 IPR011004 Trimeric LpxA-like superfamily LJF99_01265 IPR010835 Protein of unknown function DUF1439 LJF99_01270 IPR004561 Isochorismate synthase LJF99_01270 IPR015890 Chorismate-utilising enzyme, C-terminal LJF99_01270 IPR005801 ADC synthase LJF99_01275 IPR011963 2,3-dihydroxybenzoate-AMP ligase LJF99_01275 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_01275 IPR020845 AMP-binding, conserved site LJF99_01275 IPR000873 AMP-dependent synthetase/ligase LJF99_01275 IPR042099 AMP-dependent synthetase-like superfamily LJF99_01280 IPR036380 Isochorismatase-like superfamily LJF99_01280 IPR000868 Isochorismatase-like LJF99_01280 IPR009081 Phosphopantetheine binding ACP domain LJF99_01280 IPR036736 ACP-like superfamily LJF99_01280 IPR016291 Isochorismatase LJF99_01285 IPR029058 Alpha/Beta hydrolase fold LJF99_01285 IPR010071 Amino acid adenylation domain LJF99_01285 IPR036736 ACP-like superfamily LJF99_01285 IPR020845 AMP-binding, conserved site LJF99_01285 IPR000873 AMP-dependent synthetase/ligase LJF99_01285 IPR042099 AMP-dependent synthetase-like superfamily LJF99_01285 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_01285 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_01285 IPR001242 Condensation domain LJF99_01285 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LJF99_01285 IPR020802 Polyketide synthase, thioesterase domain LJF99_01285 IPR009081 Phosphopantetheine binding ACP domain LJF99_01285 IPR001031 Thioesterase LJF99_01290 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase LJF99_01290 IPR036291 NAD(P)-binding domain superfamily LJF99_01290 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_01290 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_01295 IPR010060 Non-ribosomal peptide synthase LJF99_01295 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LJF99_01295 IPR000873 AMP-dependent synthetase/ligase LJF99_01295 IPR006162 Phosphopantetheine attachment site LJF99_01295 IPR036291 NAD(P)-binding domain superfamily LJF99_01295 IPR010080 Thioester reductase-like domain LJF99_01295 IPR009081 Phosphopantetheine binding ACP domain LJF99_01295 IPR013120 Male sterility, NAD-binding LJF99_01295 IPR036736 ACP-like superfamily LJF99_01295 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_01295 IPR042099 AMP-dependent synthetase-like superfamily LJF99_01295 IPR020845 AMP-binding, conserved site LJF99_01295 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_01295 IPR010071 Amino acid adenylation domain LJF99_01295 IPR001242 Condensation domain LJF99_01300 IPR042104 Polyketide synthase, dehydratase domain superfamily LJF99_01300 IPR020807 Polyketide synthase, dehydratase domain LJF99_01300 IPR013968 Polyketide synthase, ketoreductase domain LJF99_01300 IPR016039 Thiolase-like LJF99_01300 IPR009081 Phosphopantetheine binding ACP domain LJF99_01300 IPR006162 Phosphopantetheine attachment site LJF99_01300 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LJF99_01300 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LJF99_01300 IPR032821 Ketoacyl-synthetase, C-terminal extension LJF99_01300 IPR010071 Amino acid adenylation domain LJF99_01300 IPR014030 Beta-ketoacyl synthase, N-terminal LJF99_01300 IPR036291 NAD(P)-binding domain superfamily LJF99_01300 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_01300 IPR020845 AMP-binding, conserved site LJF99_01300 IPR000873 AMP-dependent synthetase/ligase LJF99_01300 IPR014031 Beta-ketoacyl synthase, C-terminal LJF99_01300 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_01300 IPR042099 AMP-dependent synthetase-like superfamily LJF99_01300 IPR036736 ACP-like superfamily LJF99_01300 IPR001242 Condensation domain LJF99_01300 IPR018201 Beta-ketoacyl synthase, active site LJF99_01305 IPR002491 ABC transporter periplasmic binding domain LJF99_01310 IPR008278 4'-phosphopantetheinyl transferase domain LJF99_01310 IPR037143 4'-phosphopantetheinyl transferase domain superfamily LJF99_01310 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain LJF99_01310 IPR003542 Enterobactin synthetase-like, component D LJF99_01315 IPR003593 AAA+ ATPase domain LJF99_01315 IPR003439 ABC transporter-like LJF99_01315 IPR017871 ABC transporter, conserved site LJF99_01315 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01320 IPR037294 ABC transporter, BtuC-like LJF99_01320 IPR000522 ABC transporter, permease protein, BtuC-like LJF99_01325 IPR000522 ABC transporter, permease protein, BtuC-like LJF99_01325 IPR037294 ABC transporter, BtuC-like LJF99_01330 IPR039426 Vitamin B12 transporter BtuB-like LJF99_01330 IPR012910 TonB-dependent receptor, plug domain LJF99_01330 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_01330 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_01330 IPR010916 TonB box, conserved site LJF99_01330 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_01330 IPR010917 TonB-dependent receptor, conserved site LJF99_01345 IPR021318 Protein of unknown function DUF2919 LJF99_01350 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB LJF99_01350 IPR004488 Magnesium/cobalt transport protein CorA LJF99_01360 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal LJF99_01360 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site LJF99_01360 IPR012255 Electron transfer flavoprotein, beta subunit LJF99_01360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_01360 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal LJF99_01365 IPR029035 DHS-like NAD/FAD-binding domain superfamily LJF99_01365 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal LJF99_01365 IPR001308 Electron transfer flavoprotein alpha subunit/FixB LJF99_01365 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal LJF99_01365 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal LJF99_01365 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site LJF99_01365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_01370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_01370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_01370 IPR022278 Phosphoserine aminotransferase LJF99_01370 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LJF99_01370 IPR000192 Aminotransferase class V domain LJF99_01370 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_01375 IPR036968 Enolpyruvate transferase domain superfamily LJF99_01375 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase LJF99_01375 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site LJF99_01375 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta LJF99_01375 IPR001986 Enolpyruvate transferase domain LJF99_01380 IPR013785 Aldolase-type TIM barrel LJF99_01380 IPR006218 DAHP synthetase I/KDSA LJF99_01380 IPR006219 DHAP synthase, class 1 LJF99_01390 IPR034505 Anaerobic coproporphyrinogen-III oxidase LJF99_01390 IPR026332 Anaerobilin synthase HutW LJF99_01390 IPR007197 Radical SAM LJF99_01390 IPR023404 Radical SAM, alpha/beta horseshoe LJF99_01390 IPR006638 Elp3/MiaB/NifB LJF99_01395 IPR003753 Exonuclease VII, large subunit LJF99_01395 IPR020579 Exonuclease VII, large subunit, C-terminal LJF99_01395 IPR025824 OB-fold nucleic acid binding domain LJF99_01400 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase LJF99_01400 IPR016174 Di-haem cytochrome, transmembrane LJF99_01405 IPR003400 Biopolymer transport protein ExbD/TolR LJF99_01410 IPR002898 MotA/TolQ/ExbB proton channel LJF99_01420 IPR001093 IMP dehydrogenase/GMP reductase LJF99_01420 IPR013785 Aldolase-type TIM barrel LJF99_01420 IPR000644 CBS domain LJF99_01420 IPR005990 Inosine-5'-monophosphate dehydrogenase LJF99_01420 IPR015875 IMP dehydrogenase / GMP reductase, conserved site LJF99_01425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_01425 IPR022310 NAD/GMP synthase LJF99_01425 IPR025777 GMP synthetase ATP pyrophosphatase domain LJF99_01425 IPR022955 GMP synthase LJF99_01425 IPR017926 Glutamine amidotransferase LJF99_01425 IPR001674 GMP synthase, C-terminal LJF99_01425 IPR029062 Class I glutamine amidotransferase-like LJF99_01425 IPR004739 GMP synthase, glutamine amidotransferase LJF99_01455 IPR025835 Thiopurine S-methyltransferase LJF99_01455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_01455 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification LJF99_01455 IPR008854 TPMT family LJF99_01460 IPR011765 Peptidase M16, N-terminal LJF99_01460 IPR001431 Peptidase M16, zinc-binding site LJF99_01460 IPR007863 Peptidase M16, C-terminal LJF99_01460 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LJF99_01460 IPR032632 Peptidase M16, middle/third domain LJF99_01465 IPR004449 Phosphohistidine phosphatase SixA LJF99_01465 IPR029033 Histidine phosphatase superfamily LJF99_01465 IPR013078 Histidine phosphatase superfamily, clade-1 LJF99_01475 IPR000620 EamA domain LJF99_01480 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_01480 IPR039424 Solute-binding protein family 5 LJF99_01480 IPR023765 Solute-binding protein family 5, conserved site LJF99_01480 IPR000914 Solute-binding protein family 5 domain LJF99_01485 IPR000146 Fructose-1,6-bisphosphatase class 1 LJF99_01485 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal LJF99_01485 IPR028343 Fructose-1,6-bisphosphatase LJF99_01485 IPR020548 Fructose-1,6-bisphosphatase, active site LJF99_01490 IPR003711 CarD-like/TRCF domain LJF99_01490 IPR041471 UvrB, interaction domain LJF99_01490 IPR005118 Transcription-repair-coupling factor, C-terminal domain LJF99_01490 IPR037235 TRCF-like, C-terminal domain LJF99_01490 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01490 IPR004576 Transcription-repair coupling factor LJF99_01490 IPR036101 CarD-like/TRCF domain superfamily LJF99_01490 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_01490 IPR011545 DEAD/DEAH box helicase domain LJF99_01490 IPR001650 Helicase, C-terminal LJF99_01500 IPR003838 ABC transporter permease protein domain LJF99_01500 IPR025857 MacB-like periplasmic core domain LJF99_01500 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E LJF99_01505 IPR015854 ABC transporter, lipoprotein release, LolD LJF99_01505 IPR017871 ABC transporter, conserved site LJF99_01505 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01505 IPR003593 AAA+ ATPase domain LJF99_01505 IPR003439 ABC transporter-like LJF99_01505 IPR011924 Lipoprotein releasing system, ATP-binding protein LJF99_01510 IPR025857 MacB-like periplasmic core domain LJF99_01510 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E LJF99_01510 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type LJF99_01510 IPR003838 ABC transporter permease protein domain LJF99_01515 IPR039356 Metal-dependent nucleoside 5'-monophosphatase LJF99_01515 IPR003607 HD/PDEase domain LJF99_01515 IPR022971 5'-deoxynucleotidase YfbR LJF99_01525 IPR027304 Trigger factor/SurA domain superfamily LJF99_01525 IPR036611 Trigger factor ribosome-binding domain superfamily LJF99_01525 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LJF99_01525 IPR037041 Trigger factor, C-terminal domain superfamily LJF99_01525 IPR008880 Trigger factor, C-terminal LJF99_01525 IPR005215 Trigger factor LJF99_01525 IPR008881 Trigger factor, ribosome-binding, bacterial LJF99_01530 IPR001907 ATP-dependent Clp protease proteolytic subunit LJF99_01530 IPR029045 ClpP/crotonase-like domain superfamily LJF99_01530 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LJF99_01530 IPR033135 ClpP, histidine active site LJF99_01530 IPR018215 ClpP, Ser active site LJF99_01535 IPR038366 Zinc finger, ClpX C4-type superfamily LJF99_01535 IPR010603 Zinc finger, ClpX C4-type LJF99_01535 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01535 IPR019489 Clp ATPase, C-terminal LJF99_01535 IPR003593 AAA+ ATPase domain LJF99_01535 IPR004487 Clp protease, ATP-binding subunit ClpX LJF99_01535 IPR003959 ATPase, AAA-type, core LJF99_01540 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01540 IPR003593 AAA+ ATPase domain LJF99_01540 IPR003959 ATPase, AAA-type, core LJF99_01540 IPR027543 Lon protease, bacterial LJF99_01540 IPR004815 Lon protease, bacterial/eukaryotic-type LJF99_01540 IPR008269 Peptidase S16, Lon proteolytic domain LJF99_01540 IPR003111 Lon, substrate-binding domain LJF99_01540 IPR027065 Lon protease LJF99_01540 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_01540 IPR008268 Peptidase S16, active site LJF99_01540 IPR015947 PUA-like superfamily LJF99_01540 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_01545 IPR020816 Histone-like DNA-binding protein, conserved site LJF99_01545 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LJF99_01545 IPR000119 Histone-like DNA-binding protein LJF99_01550 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LJF99_01550 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LJF99_01550 IPR027304 Trigger factor/SurA domain superfamily LJF99_01555 IPR003593 AAA+ ATPase domain LJF99_01555 IPR032781 ABC-transporter extension domain LJF99_01555 IPR003439 ABC transporter-like LJF99_01555 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01560 IPR018212 Sodium/solute symporter, conserved site LJF99_01560 IPR014083 Cation/acetate symporter ActP LJF99_01560 IPR001734 Sodium/solute symporter LJF99_01560 IPR038377 Sodium/glucose symporter superfamily LJF99_01565 IPR007436 Protein of unknown function DUF485 LJF99_01580 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site LJF99_01580 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LJF99_01580 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LJF99_01580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_01580 IPR029045 ClpP/crotonase-like domain superfamily LJF99_01580 IPR001753 Enoyl-CoA hydratase/isomerase LJF99_01580 IPR012802 Fatty oxidation complex, alpha subunit FadJ LJF99_01580 IPR036291 NAD(P)-binding domain superfamily LJF99_01585 IPR001463 Sodium:alanine symporter LJF99_01590 IPR000182 GNAT domain LJF99_01590 IPR016181 Acyl-CoA N-acyltransferase LJF99_01600 IPR000791 Acetate transporter GPR1/FUN34/SatP family LJF99_01615 IPR009061 Putative DNA-binding domain superfamily LJF99_01615 IPR000551 MerR-type HTH domain LJF99_01615 IPR015358 Transcription regulator MerR, DNA binding LJF99_01615 IPR011789 Cu(I)-responsive transcriptional regulator LJF99_01620 IPR000891 Pyruvate carboxyltransferase LJF99_01620 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site LJF99_01620 IPR013785 Aldolase-type TIM barrel LJF99_01620 IPR027167 Hydroxymethylglutaryl-CoA lyase LJF99_01625 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LJF99_01625 IPR016185 Pre-ATP-grasp domain superfamily LJF99_01625 IPR005481 Biotin carboxylase-like, N-terminal domain LJF99_01625 IPR011761 ATP-grasp fold LJF99_01625 IPR011054 Rudiment single hybrid motif LJF99_01625 IPR001882 Biotin-binding site LJF99_01625 IPR000089 Biotin/lipoyl attachment LJF99_01625 IPR011053 Single hybrid motif LJF99_01625 IPR011764 Biotin carboxylation domain LJF99_01625 IPR005482 Biotin carboxylase, C-terminal LJF99_01630 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LJF99_01630 IPR001753 Enoyl-CoA hydratase/isomerase LJF99_01630 IPR014748 Enoyl-CoA hydratase, C-terminal LJF99_01630 IPR029045 ClpP/crotonase-like domain superfamily LJF99_01635 IPR034733 Acetyl-CoA carboxylase LJF99_01635 IPR029045 ClpP/crotonase-like domain superfamily LJF99_01635 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal LJF99_01635 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal LJF99_01640 IPR006089 Acyl-CoA dehydrogenase, conserved site LJF99_01640 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LJF99_01640 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LJF99_01640 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LJF99_01640 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LJF99_01640 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LJF99_01640 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LJF99_01645 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_01645 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_01645 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_01645 IPR016160 Aldehyde dehydrogenase, cysteine active site LJF99_01645 IPR015590 Aldehyde dehydrogenase domain LJF99_01645 IPR010061 Methylmalonate-semialdehyde dehydrogenase LJF99_01650 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LJF99_01650 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LJF99_01650 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LJF99_01650 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LJF99_01650 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LJF99_01650 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LJF99_01650 IPR006089 Acyl-CoA dehydrogenase, conserved site LJF99_01655 IPR029045 ClpP/crotonase-like domain superfamily LJF99_01655 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LJF99_01655 IPR001753 Enoyl-CoA hydratase/isomerase LJF99_01655 IPR014748 Enoyl-CoA hydratase, C-terminal LJF99_01660 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LJF99_01660 IPR001753 Enoyl-CoA hydratase/isomerase LJF99_01660 IPR014748 Enoyl-CoA hydratase, C-terminal LJF99_01660 IPR029045 ClpP/crotonase-like domain superfamily LJF99_01665 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LJF99_01665 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain LJF99_01665 IPR036291 NAD(P)-binding domain superfamily LJF99_01665 IPR011548 3-hydroxyisobutyrate dehydrogenase LJF99_01665 IPR015815 3-hydroxyisobutyrate dehydrogenase-related LJF99_01665 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site LJF99_01665 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LJF99_01665 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_01670 IPR036291 NAD(P)-binding domain superfamily LJF99_01670 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_01670 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_01670 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LJF99_01675 IPR002293 Amino acid/polyamine transporter I LJF99_01675 IPR022461 Arginine/ornithine antiporter LJF99_01675 IPR004754 Amino acid antiporter LJF99_01680 IPR002781 Transmembrane protein TauE-like LJF99_01715 IPR012337 Ribonuclease H-like superfamily LJF99_01715 IPR038717 Tc1-like transposase, DDE domain LJF99_01715 IPR025959 Winged helix-turn helix domain LJF99_01715 IPR009057 Homeobox-like domain superfamily LJF99_01735 IPR000014 PAS domain LJF99_01735 IPR029787 Nucleotide cyclase LJF99_01735 IPR000160 GGDEF domain LJF99_01735 IPR013656 PAS fold-4 LJF99_01735 IPR035965 PAS domain superfamily LJF99_01735 IPR000700 PAS-associated, C-terminal LJF99_01740 IPR022990 Uncharacterised protein family UPF0115 LJF99_01740 IPR002625 Smr domain LJF99_01740 IPR036063 Smr domain superfamily LJF99_01745 IPR004556 Methyltransferase HemK-like LJF99_01745 IPR007848 Methyltransferase small domain LJF99_01745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_01745 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase LJF99_01745 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_01750 IPR035904 Chorismate synthase AroC superfamily LJF99_01750 IPR000453 Chorismate synthase LJF99_01750 IPR020541 Chorismate synthase, conserved site LJF99_01760 IPR011545 DEAD/DEAH box helicase domain LJF99_01760 IPR028622 ATP-dependent RNA helicase RhlE LJF99_01760 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_01760 IPR001650 Helicase, C-terminal LJF99_01760 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_01760 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_01760 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_01775 IPR018227 Amino acid/polyamine transporter 2 LJF99_01775 IPR013059 Tryptophan/tyrosine transporter LJF99_01775 IPR013061 Tryptophan/tryrosine permease, conserved site LJF99_01780 IPR028082 Periplasmic binding protein-like I LJF99_01780 IPR001761 Periplasmic binding protein/LacI sugar binding domain LJF99_01780 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_01780 IPR000843 LacI-type HTH domain LJF99_01780 IPR012781 D-fructose-responsive transcription factor LJF99_01785 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LJF99_01785 IPR016152 Phosphotransferase/anion transporter LJF99_01785 IPR035895 HPr-like superfamily LJF99_01785 IPR000032 Phosphocarrier protein HPr-like LJF99_01785 IPR002178 PTS EIIA type-2 domain LJF99_01785 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LJF99_01790 IPR022463 Fructose 1-phosphate kinase LJF99_01790 IPR029056 Ribokinase-like LJF99_01790 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LJF99_01790 IPR011611 Carbohydrate kinase PfkB LJF99_01790 IPR017583 Tagatose/fructose phosphokinase LJF99_01795 IPR036095 PTS system IIB component-like superfamily LJF99_01795 IPR013011 Phosphotransferase system, EIIB component, type 2 LJF99_01795 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LJF99_01795 IPR003352 Phosphotransferase system, EIIC LJF99_01795 IPR003353 Phosphotransferase system, fructose-specific IIB subunit LJF99_01795 IPR013014 Phosphotransferase system, EIIC component, type 2 LJF99_01795 IPR006327 Phosphotransferase system, fructose IIC component LJF99_01800 IPR010710 Protein of unknown function DUF1289 LJF99_01805 IPR010611 3D domain LJF99_01805 IPR026044 Membrane-bound lytic murein transglycosylase A LJF99_01805 IPR034654 MltA, 3D domain LJF99_01805 IPR005300 Lytic transglycosylase MltA, domain B LJF99_01805 IPR036908 RlpA-like domain superfamily LJF99_01810 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LJF99_01810 IPR012675 Beta-grasp domain superfamily LJF99_01810 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_01810 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_01815 IPR000358 Ribonucleotide reductase small subunit family LJF99_01815 IPR030475 Ribonucleotide reductase small subunit, acitve site LJF99_01815 IPR033909 Ribonucleotide reductase small subunit LJF99_01815 IPR012348 Ribonucleotide reductase-like LJF99_01815 IPR009078 Ferritin-like superfamily LJF99_01820 IPR005144 ATP-cone domain LJF99_01820 IPR039718 Ribonucleoside-diphosphate reductase large subunit LJF99_01820 IPR013509 Ribonucleotide reductase large subunit, N-terminal LJF99_01820 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal LJF99_01820 IPR013346 Ribonucleotide reductase, class I , alpha subunit LJF99_01820 IPR000788 Ribonucleotide reductase large subunit, C-terminal LJF99_01825 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LJF99_01825 IPR036412 HAD-like superfamily LJF99_01825 IPR006439 HAD hydrolase, subfamily IA LJF99_01825 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_01825 IPR023214 HAD superfamily LJF99_01825 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LJF99_01830 IPR010233 Ubiquinone biosynthesis O-methyltransferase LJF99_01830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_01835 IPR005743 DNA gyrase, subunit A LJF99_01835 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat LJF99_01835 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal LJF99_01835 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LJF99_01835 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal LJF99_01835 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta LJF99_01835 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily LJF99_01845 IPR013785 Aldolase-type TIM barrel LJF99_01845 IPR006638 Elp3/MiaB/NifB LJF99_01845 IPR040086 Protein MJ0683-like LJF99_01845 IPR007197 Radical SAM LJF99_01855 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LJF99_01855 IPR033728 Threonine-tRNA ligase catalytic core domain LJF99_01855 IPR002320 Threonine-tRNA ligase, class IIa LJF99_01855 IPR012676 TGS-like LJF99_01855 IPR004095 TGS LJF99_01855 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LJF99_01855 IPR036621 Anticodon-binding domain superfamily LJF99_01855 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LJF99_01855 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_01855 IPR012675 Beta-grasp domain superfamily LJF99_01855 IPR004154 Anticodon-binding LJF99_01860 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily LJF99_01860 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily LJF99_01860 IPR019813 Translation initiation factor 3, conserved site LJF99_01860 IPR001288 Translation initiation factor 3 LJF99_01860 IPR019814 Translation initiation factor 3, N-terminal LJF99_01860 IPR019815 Translation initiation factor 3, C-terminal LJF99_01865 IPR021137 Ribosomal protein L35 LJF99_01865 IPR018265 Ribosomal protein L35, conserved site LJF99_01865 IPR001706 Ribosomal protein L35, non-mitochondrial LJF99_01865 IPR037229 Ribosomal protein L35 superfamily LJF99_01870 IPR005813 Ribosomal protein L20 LJF99_01870 IPR035566 Ribosomal protein L20, C-terminal LJF99_01875 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial LJF99_01875 IPR002319 Phenylalanyl-tRNA synthetase LJF99_01875 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LJF99_01875 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal LJF99_01875 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_01875 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit LJF99_01880 IPR005147 tRNA synthetase, B5-domain LJF99_01880 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain LJF99_01880 IPR002547 tRNA-binding domain LJF99_01880 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LJF99_01880 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain LJF99_01880 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily LJF99_01880 IPR005121 Ferrodoxin-fold anticodon-binding domain LJF99_01880 IPR009061 Putative DNA-binding domain superfamily LJF99_01880 IPR005146 B3/B4 tRNA-binding domain LJF99_01880 IPR012340 Nucleic acid-binding, OB-fold LJF99_01880 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit LJF99_01885 IPR000119 Histone-like DNA-binding protein LJF99_01885 IPR020816 Histone-like DNA-binding protein, conserved site LJF99_01885 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LJF99_01885 IPR005684 Integration host factor, alpha subunit LJF99_01905 IPR026590 Sirtuin family, catalytic core domain LJF99_01905 IPR003000 Sirtuin family LJF99_01905 IPR026591 Sirtuin, catalytic core small domain superfamily LJF99_01905 IPR029035 DHS-like NAD/FAD-binding domain superfamily LJF99_01905 IPR027546 Sirtuin, class III LJF99_01915 IPR033417 Periplasmic sensor domain CHASE8 LJF99_01915 IPR000160 GGDEF domain LJF99_01915 IPR003660 HAMP domain LJF99_01915 IPR029787 Nucleotide cyclase LJF99_01920 IPR000843 LacI-type HTH domain LJF99_01920 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_01920 IPR028082 Periplasmic binding protein-like I LJF99_01920 IPR023588 Transcription regulator HTH, PurR LJF99_01925 IPR029056 Ribokinase-like LJF99_01925 IPR002139 Ribokinase/fructokinase LJF99_01925 IPR011877 Ribokinase LJF99_01925 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LJF99_01925 IPR011611 Carbohydrate kinase PfkB LJF99_01930 IPR028082 Periplasmic binding protein-like I LJF99_01930 IPR025997 Periplasmic binding protein LJF99_01935 IPR001851 ABC transporter, permease LJF99_01945 IPR023064 D-ribose pyranase LJF99_01945 IPR023750 RbsD-like superfamily LJF99_01945 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU LJF99_01950 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LJF99_01950 IPR010987 Glutathione S-transferase, C-terminal-like LJF99_01950 IPR040079 Glutathione Transferase family LJF99_01950 IPR004045 Glutathione S-transferase, N-terminal LJF99_01950 IPR036249 Thioredoxin-like superfamily LJF99_01950 IPR004046 Glutathione S-transferase, C-terminal LJF99_01965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_01965 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LJF99_01965 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase LJF99_01965 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type LJF99_01970 IPR006016 UspA LJF99_01975 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_01975 IPR036390 Winged helix DNA-binding domain superfamily LJF99_01975 IPR018335 Transcription regulator HTH, Crp-type, conserved site LJF99_01975 IPR012318 Crp-type HTH domain LJF99_01975 IPR000595 Cyclic nucleotide-binding domain LJF99_01975 IPR018490 Cyclic nucleotide-binding-like LJF99_01975 IPR014710 RmlC-like jelly roll fold LJF99_01990 IPR017969 Heavy-metal-associated, conserved site LJF99_01990 IPR036163 Heavy metal-associated domain superfamily LJF99_01990 IPR006121 Heavy metal-associated domain, HMA LJF99_01990 IPR006122 Heavy metal-associated domain, copper ion-binding LJF99_01990 IPR023214 HAD superfamily LJF99_01990 IPR001757 P-type ATPase LJF99_01990 IPR008250 P-type ATPase, A domain superfamily LJF99_01990 IPR023298 P-type ATPase, transmembrane domain superfamily LJF99_01990 IPR018303 P-type ATPase, phosphorylation site LJF99_01990 IPR023299 P-type ATPase, cytoplasmic domain N LJF99_01990 IPR036412 HAD-like superfamily LJF99_01990 IPR027256 P-type ATPase, subfamily IB LJF99_02000 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal LJF99_02000 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily LJF99_02000 IPR009056 Cytochrome c-like domain LJF99_02000 IPR036909 Cytochrome c-like domain superfamily LJF99_02000 IPR008168 Cytochrome c, class IC LJF99_02000 IPR004678 Cytochrome c oxidase cbb3-type, subunit III LJF99_02015 IPR023616 Cytochrome c oxidase-like, subunit I domain LJF99_02015 IPR036927 Cytochrome c oxidase-like, subunit I superfamily LJF99_02015 IPR000883 Cytochrome c oxidase subunit I LJF99_02015 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site LJF99_02015 IPR004677 Cytochrome c oxidase cbb3-type, subunit I LJF99_02025 IPR003018 GAF domain LJF99_02025 IPR029016 GAF-like domain superfamily LJF99_02025 IPR000614 Free Met sulfoxide reductase conserved site LJF99_02030 IPR016103 ProQ/FinO domain LJF99_02030 IPR036442 ProQ/FinO domain superfamily LJF99_02030 IPR023529 RNA chaperone ProQ LJF99_02030 IPR035236 RNA chaperone ProQ, C-terminal LJF99_02035 IPR020992 Tail specific protease, C-terminal LJF99_02035 IPR029045 ClpP/crotonase-like domain superfamily LJF99_02035 IPR001478 PDZ domain LJF99_02035 IPR036034 PDZ superfamily LJF99_02035 IPR040573 Tail specific protease, N-terminal domain LJF99_02035 IPR005151 Tail specific protease LJF99_02035 IPR004447 C-terminal-processing peptidase S41A LJF99_02040 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LJF99_02040 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily LJF99_02040 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase LJF99_02040 IPR027268 Peptidase M4/M1, CTD superfamily LJF99_02040 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold LJF99_02040 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily LJF99_02040 IPR042097 Aminopeptidase N-like , N-terminal LJF99_02040 IPR014782 Peptidase M1, membrane alanine aminopeptidase LJF99_02040 IPR012779 Peptidase M1, alanyl aminopeptidase LJF99_02050 IPR036291 NAD(P)-binding domain superfamily LJF99_02050 IPR028971 NAD-glutamate dehydrogenase LJF99_02050 IPR007780 NAD-glutamate dehydrogenase, bacteria LJF99_02055 IPR013785 Aldolase-type TIM barrel LJF99_02055 IPR005720 Dihydroorotate dehydrogenase domain LJF99_02055 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 LJF99_02055 IPR005719 Dihydroorotate dehydrogenase, class 2 LJF99_02055 IPR001295 Dihydroorotate dehydrogenase, conserved site LJF99_02060 IPR009809 Cell division protein ZapC LJF99_02065 IPR004114 THUMP domain LJF99_02065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_02065 IPR019614 S-adenosylmethionine-dependent methyltransferase LJF99_02065 IPR000241 Putative RNA methylase domain LJF99_02065 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_02065 IPR017244 Ribosomal RNA large subunit methyltransferase K/L LJF99_02075 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LJF99_02075 IPR032781 ABC-transporter extension domain LJF99_02075 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02075 IPR017871 ABC transporter, conserved site LJF99_02075 IPR003439 ABC transporter-like LJF99_02075 IPR032524 ABC transporter Uup, C-terminal LJF99_02075 IPR003593 AAA+ ATPase domain LJF99_02085 IPR007040 Ribosome modulation factor LJF99_02085 IPR023200 Ribosome modulation factor domain superfamily LJF99_02090 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA LJF99_02090 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ LJF99_02090 IPR029069 HotDog domain superfamily LJF99_02095 IPR041699 Lon protease, AAA domain LJF99_02095 IPR008269 Peptidase S16, Lon proteolytic domain LJF99_02095 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_02095 IPR027065 Lon protease LJF99_02095 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_02110 IPR008900 Zona occludens toxin, N-terminal LJF99_02125 IPR036397 Ribonuclease H superfamily LJF99_02125 IPR012337 Ribonuclease H-like superfamily LJF99_02125 IPR001584 Integrase, catalytic core LJF99_02125 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_02130 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_02130 IPR002611 IstB-like ATP-binding protein LJF99_02130 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02130 IPR003593 AAA+ ATPase domain LJF99_02200 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_02200 IPR036291 NAD(P)-binding domain superfamily LJF99_02200 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_02225 IPR009721 O-acyltransferase WSD1, C-terminal LJF99_02225 IPR004255 O-acyltransferase, WSD1, N-terminal LJF99_02225 IPR014292 Acyltransferase, WS/DGAT/MGAT LJF99_02240 IPR012705 2-methylcitrate dehydratase PrpD LJF99_02240 IPR036148 MmgE/PrpD superfamily LJF99_02240 IPR042183 MmgE/PrpD superfamily, domain 1 LJF99_02240 IPR042188 MmgE/PrpD superfamily, domain 2 LJF99_02240 IPR005656 MmgE/PrpD LJF99_02250 IPR040442 Pyruvate kinase-like domain superfamily LJF99_02250 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_02250 IPR012695 2-methylisocitrate lyase LJF99_02250 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site LJF99_02250 IPR039556 ICL/PEPM domain LJF99_02260 IPR007498 Intermembrane transport protein PqiA-like LJF99_02260 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type LJF99_02270 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site LJF99_02270 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal LJF99_02270 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type LJF99_02270 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain LJF99_02270 IPR011023 Nop2p LJF99_02270 IPR023545 rRNA small subunit methyltransferase F LJF99_02270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_02270 IPR023267 RNA (C5-cytosine) methyltransferase LJF99_02285 IPR001130 TatD family LJF99_02285 IPR032466 Metal-dependent hydrolase LJF99_02285 IPR015991 Uncharacterised hydrolase TatD-type LJF99_02285 IPR018228 Deoxyribonuclease, TatD-related, conserved site LJF99_02290 IPR004622 DNA polymerase III, delta prime subunit LJF99_02290 IPR015199 DNA polymerase III, delta subunit, C-terminal LJF99_02290 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02290 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LJF99_02295 IPR018094 Thymidylate kinase LJF99_02295 IPR018095 Thymidylate kinase, conserved site LJF99_02295 IPR039430 Thymidylate kinase-like domain LJF99_02295 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02300 IPR003770 Endolytic murein transglycosylase LJF99_02305 IPR017824 Aminodeoxychorismate lyase, class IV LJF99_02305 IPR001544 Aminotransferase class IV LJF99_02305 IPR018300 Aminotransferase, class IV, conserved site LJF99_02305 IPR036038 Aminotransferase-like, PLP-dependent enzymes LJF99_02310 IPR016039 Thiolase-like LJF99_02310 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LJF99_02310 IPR014030 Beta-ketoacyl synthase, N-terminal LJF99_02310 IPR000794 Beta-ketoacyl synthase LJF99_02310 IPR018201 Beta-ketoacyl synthase, active site LJF99_02310 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 LJF99_02310 IPR014031 Beta-ketoacyl synthase, C-terminal LJF99_02315 IPR006162 Phosphopantetheine attachment site LJF99_02315 IPR003231 Acyl carrier protein (ACP) LJF99_02315 IPR009081 Phosphopantetheine binding ACP domain LJF99_02315 IPR036736 ACP-like superfamily LJF99_02320 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LJF99_02320 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_02320 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_02320 IPR036291 NAD(P)-binding domain superfamily LJF99_02325 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type LJF99_02325 IPR001227 Acyl transferase domain superfamily LJF99_02325 IPR014043 Acyl transferase LJF99_02325 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LJF99_02325 IPR024925 Malonyl CoA-acyl carrier protein transacylase LJF99_02325 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LJF99_02330 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LJF99_02330 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LJF99_02330 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LJF99_02330 IPR016039 Thiolase-like LJF99_02335 IPR003664 Fatty acid synthesis PlsX protein LJF99_02335 IPR012281 Phospholipid biosynthesis protein, PlsX-like LJF99_02340 IPR002677 Ribosomal protein L32p LJF99_02340 IPR011332 Zinc-binding ribosomal protein LJF99_02345 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria LJF99_02345 IPR003772 Large ribosomal RNA subunit accumulation protein YceD LJF99_02350 IPR029001 Inosine triphosphate pyrophosphatase-like LJF99_02350 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein LJF99_02355 IPR023214 HAD superfamily LJF99_02355 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LJF99_02355 IPR036412 HAD-like superfamily LJF99_02355 IPR006439 HAD hydrolase, subfamily IA LJF99_02355 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_02360 IPR036986 RNA-binding S4 domain superfamily LJF99_02360 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_02360 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LJF99_02360 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_02360 IPR002942 RNA-binding S4 domain LJF99_02360 IPR006225 Pseudouridine synthase, RluC/RluD LJF99_02365 IPR028878 Ribonuclease E LJF99_02365 IPR012340 Nucleic acid-binding, OB-fold LJF99_02365 IPR021968 Polyribonucleotide phosphorylase C-terminal LJF99_02365 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G LJF99_02365 IPR004659 Ribonuclease E/G LJF99_02365 IPR022967 RNA-binding domain, S1 LJF99_02365 IPR003029 S1 domain LJF99_02370 IPR001204 Phosphate transporter LJF99_02375 IPR033704 dUTPase, trimeric LJF99_02375 IPR036157 dUTPase-like superfamily LJF99_02375 IPR029054 dUTPase-like LJF99_02375 IPR011962 dCTP deaminase LJF99_02380 IPR026008 Uridine kinase LJF99_02380 IPR006083 Phosphoribulokinase/uridine kinase LJF99_02380 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02380 IPR000764 Uridine kinase-like LJF99_02385 IPR000808 Mrp, conserved site LJF99_02385 IPR019591 Mrp/NBP35 ATP-binding protein LJF99_02385 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02385 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 LJF99_02385 IPR034904 Fe-S cluster assembly domain superfamily LJF99_02390 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain LJF99_02390 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LJF99_02390 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal LJF99_02390 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_02390 IPR014758 Methionyl-tRNA synthetase LJF99_02390 IPR015413 Methionyl/Leucyl tRNA synthetase LJF99_02390 IPR033911 Methioninyl-tRNA synthetase core domain LJF99_02390 IPR029038 Methionyl-tRNA synthetase, Zn-domain LJF99_02390 IPR012340 Nucleic acid-binding, OB-fold LJF99_02390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_02390 IPR002547 tRNA-binding domain LJF99_02390 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LJF99_02390 IPR023458 Methionine-tRNA ligase, type 1 LJF99_02395 IPR036249 Thioredoxin-like superfamily LJF99_02395 IPR004046 Glutathione S-transferase, C-terminal LJF99_02395 IPR010987 Glutathione S-transferase, C-terminal-like LJF99_02395 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LJF99_02395 IPR040079 Glutathione Transferase family LJF99_02395 IPR004045 Glutathione S-transferase, N-terminal LJF99_02400 IPR020456 Acylphosphatase LJF99_02400 IPR001792 Acylphosphatase-like domain LJF99_02400 IPR017968 Acylphosphatase, conserved site LJF99_02400 IPR036046 Acylphosphatase-like domain superfamily LJF99_02405 IPR003660 HAMP domain LJF99_02405 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LJF99_02405 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_02405 IPR000727 Target SNARE coiled-coil homology domain LJF99_02405 IPR004090 Chemotaxis methyl-accepting receptor LJF99_02410 IPR023542 rRNA large subunit methyltransferase I LJF99_02410 IPR019614 S-adenosylmethionine-dependent methyltransferase LJF99_02410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_02410 IPR041532 RlmI, PUA-like domain LJF99_02410 IPR015947 PUA-like superfamily LJF99_02410 IPR036974 PUA domain superfamily LJF99_02410 IPR002478 PUA domain LJF99_02425 IPR010918 PurM-like, C-terminal domain LJF99_02425 IPR036676 PurM-like, C-terminal domain superfamily LJF99_02425 IPR016188 PurM-like, N-terminal domain LJF99_02425 IPR023061 Selenophosphate synthetase, class I LJF99_02425 IPR036921 PurM-like, N-terminal domain superfamily LJF99_02425 IPR004536 Selenophosphate synthetase LJF99_02430 IPR001763 Rhodanese-like domain LJF99_02430 IPR036873 Rhodanese-like domain superfamily LJF99_02430 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase LJF99_02435 IPR001279 Metallo-beta-lactamase LJF99_02435 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LJF99_02440 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily LJF99_02440 IPR001021 Ribosomal protein L25, long-form LJF99_02440 IPR020055 Ribosomal protein L25, short-form LJF99_02440 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal LJF99_02440 IPR029751 Ribosomal protein L25 LJF99_02450 IPR011545 DEAD/DEAH box helicase domain LJF99_02450 IPR011709 Domain of unknown function DUF1605 LJF99_02450 IPR010222 RNA helicase HrpA LJF99_02450 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02450 IPR003593 AAA+ ATPase domain LJF99_02450 IPR001650 Helicase, C-terminal LJF99_02450 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_02450 IPR024590 RNA helicase HrpA, C-terminal LJF99_02450 IPR007502 Helicase-associated domain LJF99_02455 IPR000644 CBS domain LJF99_02455 IPR001667 DDH domain LJF99_02455 IPR038763 DHH phosphoesterase superfamily LJF99_02455 IPR003156 DHHA1 domain LJF99_02455 IPR002646 Poly A polymerase, head domain LJF99_02460 IPR000792 Transcription regulator LuxR, C-terminal LJF99_02460 IPR001789 Signal transduction response regulator, receiver domain LJF99_02460 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_02460 IPR011006 CheY-like superfamily LJF99_02465 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LJF99_02470 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily LJF99_02470 IPR004401 Nucleoid-associated protein YbaB/EbfC family LJF99_02475 IPR003593 AAA+ ATPase domain LJF99_02475 IPR001270 ClpA/B family LJF99_02475 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LJF99_02475 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV LJF99_02475 IPR022754 DNA polymerase III, gamma subunit, domain III LJF99_02475 IPR012763 DNA polymerase III, subunit gamma/ tau LJF99_02475 IPR021029 DNA polymerase III, tau subunit, domain V LJF99_02475 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02475 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily LJF99_02480 IPR029057 Phosphoribosyltransferase-like LJF99_02480 IPR005764 Adenine phosphoribosyl transferase LJF99_02480 IPR000836 Phosphoribosyltransferase domain LJF99_02485 IPR007401 Protein of unknown function DUF454 LJF99_02490 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal LJF99_02490 IPR035587 DUS-like, FMN-binding domain LJF99_02490 IPR013785 Aldolase-type TIM barrel LJF99_02490 IPR001269 tRNA-dihydrouridine synthase LJF99_02490 IPR032886 tRNA-dihydrouridine(16) synthase LJF99_02505 IPR002562 3'-5' exonuclease domain LJF99_02505 IPR006292 Ribonuclease D LJF99_02505 IPR012337 Ribonuclease H-like superfamily LJF99_02505 IPR036397 Ribonuclease H superfamily LJF99_02505 IPR002121 HRDC domain LJF99_02505 IPR010997 HRDC-like superfamily LJF99_02510 IPR020845 AMP-binding, conserved site LJF99_02510 IPR042099 AMP-dependent synthetase-like superfamily LJF99_02510 IPR000873 AMP-dependent synthetase/ligase LJF99_02510 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_02515 IPR029058 Alpha/Beta hydrolase fold LJF99_02515 IPR000073 Alpha/beta hydrolase fold-1 LJF99_02525 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB LJF99_02525 IPR000905 Gcp-like domain LJF99_02530 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_02530 IPR006935 Helicase/UvrB, N-terminal LJF99_02530 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type LJF99_02530 IPR006555 ATP-dependent helicase, C-terminal LJF99_02530 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02540 IPR013820 ATP phosphoribosyltransferase, catalytic domain LJF99_02540 IPR020621 ATP phosphoribosyltransferase HisG, long form LJF99_02540 IPR013115 Histidine biosynthesis HisG, C-terminal LJF99_02540 IPR011322 Nitrogen regulatory PII-like, alpha/beta LJF99_02540 IPR001348 ATP phosphoribosyltransferase HisG LJF99_02540 IPR018198 ATP phosphoribosyltransferase, conserved site LJF99_02540 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LJF99_02545 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_02545 IPR001692 Histidinol dehydrogenase, conserved site LJF99_02545 IPR022695 Histidinol dehydrogenase, monofunctional LJF99_02545 IPR012131 Histidinol dehydrogenase LJF99_02550 IPR004839 Aminotransferase, class I/classII LJF99_02550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_02550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_02550 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_02550 IPR005861 Histidinol-phosphate aminotransferase family LJF99_02550 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LJF99_02555 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site LJF99_02555 IPR000807 Imidazoleglycerol-phosphate dehydratase LJF99_02555 IPR006543 Histidinol-phosphate phosphatase LJF99_02555 IPR005954 Histidinol-phosphatase LJF99_02555 IPR020566 Histidine biosynthesis bifunctional protein HisB LJF99_02555 IPR023214 HAD superfamily LJF99_02555 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LJF99_02555 IPR036412 HAD-like superfamily LJF99_02555 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_02555 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily LJF99_02555 IPR013954 Polynucleotide kinase 3 phosphatase LJF99_02560 IPR029062 Class I glutamine amidotransferase-like LJF99_02560 IPR017926 Glutamine amidotransferase LJF99_02560 IPR010139 Imidazole glycerol phosphate synthase, subunit H LJF99_02565 IPR013785 Aldolase-type TIM barrel LJF99_02565 IPR006062 Histidine biosynthesis LJF99_02565 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA LJF99_02565 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase LJF99_02565 IPR011060 Ribulose-phosphate binding barrel LJF99_02570 IPR037522 HD-GYP domain LJF99_02570 IPR001789 Signal transduction response regulator, receiver domain LJF99_02570 IPR003607 HD/PDEase domain LJF99_02570 IPR011006 CheY-like superfamily LJF99_02575 IPR029787 Nucleotide cyclase LJF99_02575 IPR000014 PAS domain LJF99_02575 IPR000700 PAS-associated, C-terminal LJF99_02575 IPR000160 GGDEF domain LJF99_02575 IPR035965 PAS domain superfamily LJF99_02575 IPR013656 PAS fold-4 LJF99_02580 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_02580 IPR011006 CheY-like superfamily LJF99_02580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_02580 IPR001789 Signal transduction response regulator, receiver domain LJF99_02580 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_02580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_02580 IPR005467 Histidine kinase domain LJF99_02580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_02580 IPR036641 HPT domain superfamily LJF99_02580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_02585 IPR013785 Aldolase-type TIM barrel LJF99_02585 IPR004651 Histidine biosynthesis, HisF LJF99_02585 IPR011060 Ribulose-phosphate binding barrel LJF99_02585 IPR006062 Histidine biosynthesis LJF99_02590 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like LJF99_02590 IPR023019 Histidine biosynthesis bifunctional protein HisIE LJF99_02590 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily LJF99_02590 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase LJF99_02590 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain LJF99_02600 IPR036390 Winged helix DNA-binding domain superfamily LJF99_02600 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_02600 IPR028349 Protein PafC LJF99_02600 IPR013196 Helix-turn-helix, type 11 LJF99_02600 IPR026881 WYL domain LJF99_02600 IPR001034 DeoR-type HTH domain LJF99_02605 IPR042099 AMP-dependent synthetase-like superfamily LJF99_02605 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_02605 IPR020845 AMP-binding, conserved site LJF99_02605 IPR000873 AMP-dependent synthetase/ligase LJF99_02630 IPR001615 Delta-endotoxin CytB LJF99_02630 IPR035918 Delta-endotoxin CytB-like superfamily LJF99_02655 IPR007055 BON domain LJF99_02655 IPR014004 Transport-associated and nodulation domain, bacteria LJF99_02660 IPR003018 GAF domain LJF99_02660 IPR001294 Phytochrome LJF99_02660 IPR029016 GAF-like domain superfamily LJF99_02660 IPR029787 Nucleotide cyclase LJF99_02660 IPR001633 EAL domain LJF99_02660 IPR035919 EAL domain superfamily LJF99_02660 IPR013515 Phytochrome, central region LJF99_02660 IPR000160 GGDEF domain LJF99_02660 IPR016132 Phytochrome chromophore attachment domain LJF99_02665 IPR001851 ABC transporter, permease LJF99_02670 IPR001851 ABC transporter, permease LJF99_02675 IPR003439 ABC transporter-like LJF99_02675 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02675 IPR003593 AAA+ ATPase domain LJF99_02675 IPR017871 ABC transporter, conserved site LJF99_02680 IPR033893 ABC transporter periplasmic-binding protein YtfQ LJF99_02680 IPR028082 Periplasmic binding protein-like I LJF99_02680 IPR025997 Periplasmic binding protein LJF99_02685 IPR009057 Homeobox-like domain superfamily LJF99_02685 IPR012337 Ribonuclease H-like superfamily LJF99_02685 IPR038717 Tc1-like transposase, DDE domain LJF99_02685 IPR025959 Winged helix-turn helix domain LJF99_02690 IPR022409 PKD/Chitinase domain LJF99_02690 IPR002126 Cadherin-like LJF99_02690 IPR003610 Carbohydrate-binding module family 5/12 LJF99_02690 IPR036573 Carbohydrate-binding module superfamily 5/12 LJF99_02690 IPR014756 Immunoglobulin E-set LJF99_02690 IPR011583 Chitinase II LJF99_02690 IPR029070 Chitinase insertion domain superfamily LJF99_02690 IPR013540 Chitinase A N-terminal LJF99_02690 IPR013783 Immunoglobulin-like fold LJF99_02690 IPR001223 Glycoside hydrolase family 18, catalytic domain LJF99_02690 IPR001579 Glycoside hydrolase, chitinase active site LJF99_02690 IPR017853 Glycoside hydrolase superfamily LJF99_02700 IPR013987 PhnA protein, N-terminal LJF99_02700 IPR013988 PhnA protein, C-terminal LJF99_02700 IPR004624 PhnA protein LJF99_02705 IPR012802 Fatty oxidation complex, alpha subunit FadJ LJF99_02705 IPR001753 Enoyl-CoA hydratase/isomerase LJF99_02705 IPR029045 ClpP/crotonase-like domain superfamily LJF99_02705 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LJF99_02705 IPR036291 NAD(P)-binding domain superfamily LJF99_02705 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_02705 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LJF99_02710 IPR002155 Thiolase LJF99_02710 IPR016039 Thiolase-like LJF99_02710 IPR012806 Acetyl-CoA C-acyltransferase FadI LJF99_02710 IPR020616 Thiolase, N-terminal LJF99_02710 IPR020613 Thiolase, conserved site LJF99_02710 IPR020617 Thiolase, C-terminal LJF99_02710 IPR020615 Thiolase, acyl-enzyme intermediate active site LJF99_02715 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02715 IPR041628 ChlI/MoxR, AAA lid domain LJF99_02715 IPR011703 ATPase, AAA-3 LJF99_02720 IPR036465 von Willebrand factor A-like domain superfamily LJF99_02720 IPR002881 Domain of unknown function DUF58 LJF99_02730 IPR041628 ChlI/MoxR, AAA lid domain LJF99_02730 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02730 IPR002035 von Willebrand factor, type A LJF99_02730 IPR036465 von Willebrand factor A-like domain superfamily LJF99_02730 IPR003593 AAA+ ATPase domain LJF99_02730 IPR011704 ATPase, dynein-related, AAA domain LJF99_02730 IPR041702 Magnesium-chelatase BchD/ChlD, VWA domain LJF99_02745 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_02745 IPR039425 RNA polymerase sigma-70 like LJF99_02745 IPR014284 RNA polymerase sigma-70 like domain LJF99_02745 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LJF99_02745 IPR007627 RNA polymerase sigma-70 region 2 LJF99_02745 IPR007630 RNA polymerase sigma-70 region 4 LJF99_02745 IPR013325 RNA polymerase sigma factor, region 2 LJF99_02745 IPR013324 RNA polymerase sigma factor, region 3/4-like LJF99_02755 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) LJF99_02755 IPR042117 OMPP1/FadL/TodX superfamily LJF99_02760 IPR042117 OMPP1/FadL/TodX superfamily LJF99_02760 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) LJF99_02765 IPR013976 Metal-dependent hydrolase HDOD LJF99_02765 IPR035919 EAL domain superfamily LJF99_02765 IPR001633 EAL domain LJF99_02765 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing LJF99_02770 IPR020615 Thiolase, acyl-enzyme intermediate active site LJF99_02770 IPR002155 Thiolase LJF99_02770 IPR020617 Thiolase, C-terminal LJF99_02770 IPR020613 Thiolase, conserved site LJF99_02770 IPR020616 Thiolase, N-terminal LJF99_02770 IPR016039 Thiolase-like LJF99_02770 IPR020610 Thiolase, active site LJF99_02775 IPR011789 Cu(I)-responsive transcriptional regulator LJF99_02775 IPR009061 Putative DNA-binding domain superfamily LJF99_02775 IPR000551 MerR-type HTH domain LJF99_02775 IPR015358 Transcription regulator MerR, DNA binding LJF99_02780 IPR023954 C4-dicarboxylate transport protein LJF99_02780 IPR001991 Sodium:dicarboxylate symporter LJF99_02780 IPR018107 Sodium:dicarboxylate symporter, conserved site LJF99_02780 IPR036458 Sodium:dicarboxylate symporter superfamily LJF99_02785 IPR011051 RmlC-like cupin domain superfamily LJF99_02785 IPR009664 Pyrimidine/purine nucleoside phosphorylase LJF99_02785 IPR014710 RmlC-like jelly roll fold LJF99_02790 IPR005131 Serine dehydratase beta chain LJF99_02790 IPR005130 Serine dehydratase-like, alpha subunit LJF99_02790 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form LJF99_02790 IPR029009 Allosteric substrate binding domain superfamily LJF99_02795 IPR029009 Allosteric substrate binding domain superfamily LJF99_02795 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form LJF99_02795 IPR005130 Serine dehydratase-like, alpha subunit LJF99_02795 IPR005131 Serine dehydratase beta chain LJF99_02800 IPR023346 Lysozyme-like domain superfamily LJF99_02800 IPR011757 Lytic transglycosylase MltB LJF99_02800 IPR031304 Transglycosylase SLT domain 2 LJF99_02805 IPR038068 YcgL-like superfamily LJF99_02805 IPR027354 YcgL domain LJF99_02810 IPR013033 Septum formation inhibitor MinC LJF99_02810 IPR005526 Septum formation inhibitor MinC, C-terminal LJF99_02810 IPR007874 Septum formation inhibitor MinC, N-terminal LJF99_02810 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal LJF99_02810 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily LJF99_02810 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily LJF99_02815 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LJF99_02815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_02815 IPR010223 ATP binding protein MinD, bacterial-type LJF99_02815 IPR025501 ATP binding protein MinD LJF99_02820 IPR005527 Cell division topological specificity factor MinE LJF99_02820 IPR036707 Cell division topological specificity factor MinE superfamily LJF99_02825 IPR007376 dsDNA mimic, putative LJF99_02825 IPR036763 Putative dsDNA mimic superfamily LJF99_02830 IPR001264 Glycosyl transferase, family 51 LJF99_02830 IPR023346 Lysozyme-like domain superfamily LJF99_02830 IPR036950 Penicillin binding protein transglycosylase domain LJF99_02830 IPR011812 Biosynthetic peptidoglycan transglycosylase LJF99_02840 IPR007376 dsDNA mimic, putative LJF99_02840 IPR036763 Putative dsDNA mimic superfamily LJF99_02850 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_02850 IPR014464 Conserved virulence factor B LJF99_02850 IPR039566 Conserved virulence factor B, S1 domain LJF99_02850 IPR040764 Conserved virulence factor B-like, winged helix domain LJF99_02875 IPR003680 Flavodoxin-like fold LJF99_02875 IPR023048 NADH-azoreductase, FMN-dependent LJF99_02875 IPR029039 Flavoprotein-like superfamily LJF99_02880 IPR000620 EamA domain LJF99_02885 IPR011761 ATP-grasp fold LJF99_02885 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LJF99_02885 IPR013815 ATP-grasp fold, subdomain 1 LJF99_02885 IPR016185 Pre-ATP-grasp domain superfamily LJF99_02885 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase LJF99_02885 IPR011054 Rudiment single hybrid motif LJF99_02890 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LJF99_02890 IPR036412 HAD-like superfamily LJF99_02890 IPR006439 HAD hydrolase, subfamily IA LJF99_02890 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_02890 IPR023214 HAD superfamily LJF99_02900 IPR017938 Riboflavin synthase-like beta-barrel LJF99_02900 IPR001783 Lumazine-binding protein LJF99_02900 IPR026017 Lumazine-binding domain LJF99_02900 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LJF99_02905 IPR009624 Uncharacterised protein family UPF0253 LJF99_02910 IPR022913 Multidrug resistance protein MdtK LJF99_02910 IPR002528 Multi antimicrobial extrusion protein LJF99_02935 IPR017964 DNA-directed DNA polymerase, family B, conserved site LJF99_02935 IPR023211 DNA polymerase, palm domain superfamily LJF99_02935 IPR042087 DNA polymerase family B, C-terminal domain LJF99_02935 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain LJF99_02935 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain LJF99_02935 IPR012337 Ribonuclease H-like superfamily LJF99_02935 IPR006172 DNA-directed DNA polymerase, family B LJF99_02935 IPR036397 Ribonuclease H superfamily LJF99_02945 IPR029016 GAF-like domain superfamily LJF99_02945 IPR000160 GGDEF domain LJF99_02945 IPR029787 Nucleotide cyclase LJF99_02960 IPR011921 Lipid A biosynthesis myristoyltransferase LJF99_02960 IPR004960 Bacterial lipid A biosynthesis acyltransferase LJF99_02965 IPR004960 Bacterial lipid A biosynthesis acyltransferase LJF99_02965 IPR011921 Lipid A biosynthesis myristoyltransferase LJF99_02975 IPR005119 LysR, substrate-binding LJF99_02975 IPR000847 Transcription regulator HTH, LysR LJF99_02975 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_02975 IPR036390 Winged helix DNA-binding domain superfamily LJF99_02980 IPR000683 Oxidoreductase, N-terminal LJF99_02980 IPR004104 Oxidoreductase, C-terminal LJF99_02980 IPR036291 NAD(P)-binding domain superfamily LJF99_02985 IPR013022 Xylose isomerase-like, TIM barrel domain LJF99_02985 IPR036237 Xylose isomerase-like superfamily LJF99_02985 IPR018246 AP endonuclease 2, zinc binding site LJF99_02985 IPR001719 AP endonuclease 2 LJF99_02990 IPR036390 Winged helix DNA-binding domain superfamily LJF99_02990 IPR005119 LysR, substrate-binding LJF99_02990 IPR000847 Transcription regulator HTH, LysR LJF99_02990 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_02995 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LJF99_02995 IPR036291 NAD(P)-binding domain superfamily LJF99_02995 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_02995 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_03005 IPR018385 C4-dicarboxylate anaerobic carrier-like LJF99_03015 IPR008816 Glycine zipper 2TM domain LJF99_03035 IPR000522 ABC transporter, permease protein, BtuC-like LJF99_03035 IPR037294 ABC transporter, BtuC-like LJF99_03040 IPR003593 AAA+ ATPase domain LJF99_03040 IPR015863 ABC transporter, hemin import, HmuV LJF99_03040 IPR003439 ABC transporter-like LJF99_03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03045 IPR011701 Major facilitator superfamily LJF99_03045 IPR020846 Major facilitator superfamily domain LJF99_03045 IPR036259 MFS transporter superfamily LJF99_03055 IPR011335 Restriction endonuclease type II-like LJF99_03055 IPR009822 YaeQ LJF99_03055 IPR038590 YaeQ superfamily LJF99_03115 IPR012997 Rare lipoprotein A LJF99_03115 IPR034718 Endolytic peptidoglycan transglycosylase RlpA LJF99_03115 IPR009009 RlpA-like protein, double-psi beta-barrel domain LJF99_03115 IPR036908 RlpA-like domain superfamily LJF99_03115 IPR007730 Sporulation-like domain LJF99_03115 IPR036680 Sporulation-like domain superfamily LJF99_03120 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03120 IPR032520 MukB, hinge domain LJF99_03120 IPR012090 Chromosome partition protein MukB LJF99_03120 IPR007406 MukB, N-terminal domain LJF99_03125 IPR042037 MukE, C-terminal domain LJF99_03125 IPR042038 MukE, N-terminal domain LJF99_03125 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE LJF99_03130 IPR033440 Chromosome partition protein MukF, middle domain LJF99_03130 IPR038198 MukF, C-terminal domain superfamily LJF99_03130 IPR036141 MukF, middle domain superfamily LJF99_03130 IPR033441 Chromosome partition protein MukF, C-terminal domain LJF99_03130 IPR033439 Chromosome partition protein MukF, winged-helix domain LJF99_03130 IPR036390 Winged helix DNA-binding domain superfamily LJF99_03130 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_03130 IPR005582 Chromosome partition protein MukF LJF99_03135 IPR025714 Methyltransferase domain LJF99_03135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_03135 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase LJF99_03140 IPR003848 Domain of unknown function DUF218 LJF99_03145 IPR013785 Aldolase-type TIM barrel LJF99_03145 IPR020861 Triosephosphate isomerase, active site LJF99_03145 IPR000652 Triosephosphate isomerase LJF99_03145 IPR035990 Triosephosphate isomerase superfamily LJF99_03145 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic LJF99_03150 IPR035966 Phosphofructokinase superfamily LJF99_03150 IPR000023 Phosphofructokinase domain LJF99_03150 IPR015912 Phosphofructokinase, conserved site LJF99_03150 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic LJF99_03150 IPR022953 ATP-dependent 6-phosphofructokinase LJF99_03150 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type LJF99_03170 IPR009057 Homeobox-like domain superfamily LJF99_03170 IPR012337 Ribonuclease H-like superfamily LJF99_03170 IPR038717 Tc1-like transposase, DDE domain LJF99_03170 IPR025959 Winged helix-turn helix domain LJF99_03200 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LJF99_03200 IPR023214 HAD superfamily LJF99_03200 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_03200 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB LJF99_03200 IPR006439 HAD hydrolase, subfamily IA LJF99_03200 IPR036412 HAD-like superfamily LJF99_03205 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LJF99_03205 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LJF99_03205 IPR023042 Peptidase M17, leucine aminopeptidase LJF99_03205 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal LJF99_03235 IPR012337 Ribonuclease H-like superfamily LJF99_03235 IPR009057 Homeobox-like domain superfamily LJF99_03235 IPR038717 Tc1-like transposase, DDE domain LJF99_03235 IPR025959 Winged helix-turn helix domain LJF99_03245 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03245 IPR022602 Protein of unknown function DUF2813 LJF99_03245 IPR006171 TOPRIM domain LJF99_03245 IPR034139 OLD protein-like, TOPRIM domain LJF99_03250 IPR018060 DNA binding HTH domain, AraC-type LJF99_03250 IPR009057 Homeobox-like domain superfamily LJF99_03250 IPR018062 HTH domain AraC-type, conserved site LJF99_03250 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like LJF99_03260 IPR005119 LysR, substrate-binding LJF99_03260 IPR000847 Transcription regulator HTH, LysR LJF99_03260 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_03260 IPR036390 Winged helix DNA-binding domain superfamily LJF99_03265 IPR002781 Transmembrane protein TauE-like LJF99_03270 IPR039262 DTW domain-containing protein 2 LJF99_03270 IPR005636 DTW LJF99_03280 IPR016185 Pre-ATP-grasp domain superfamily LJF99_03280 IPR011761 ATP-grasp fold LJF99_03280 IPR011095 D-alanine--D-alanine ligase, C-terminal LJF99_03280 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site LJF99_03280 IPR011127 D-alanine--D-alanine ligase, N-terminal domain LJF99_03280 IPR005905 D-alanine--D-alanine ligase LJF99_03280 IPR013815 ATP-grasp fold, subdomain 1 LJF99_03290 IPR036249 Thioredoxin-like superfamily LJF99_03290 IPR029760 Glutathione peroxidase conserved site LJF99_03290 IPR000889 Glutathione peroxidase LJF99_03290 IPR029759 Glutathione peroxidase active site LJF99_03295 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03295 IPR001650 Helicase, C-terminal LJF99_03295 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_03295 IPR028622 ATP-dependent RNA helicase RhlE LJF99_03295 IPR011545 DEAD/DEAH box helicase domain LJF99_03295 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_03295 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_03300 IPR000182 GNAT domain LJF99_03300 IPR016181 Acyl-CoA N-acyltransferase LJF99_03310 IPR003844 Uncharacterised protein family UPF0060 LJF99_03325 IPR023577 CYTH domain LJF99_03325 IPR033469 CYTH-like domain superfamily LJF99_03325 IPR008173 Adenylyl cyclase CyaB LJF99_03345 IPR016205 Glycerol dehydrogenase LJF99_03345 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LJF99_03345 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LJF99_03350 IPR011008 Dimeric alpha-beta barrel LJF99_03350 IPR007138 Antibiotic biosynthesis monooxygenase domain LJF99_03355 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase LJF99_03355 IPR023685 Pyridoxal kinase PdxY LJF99_03355 IPR004625 Pyridoxine kinase LJF99_03355 IPR029056 Ribokinase-like LJF99_03375 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain LJF99_03375 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I LJF99_03375 IPR000073 Alpha/beta hydrolase fold-1 LJF99_03375 IPR029058 Alpha/Beta hydrolase fold LJF99_03380 IPR003965 Fatty acid synthase LJF99_03380 IPR029069 HotDog domain superfamily LJF99_03380 IPR002539 MaoC-like dehydratase domain LJF99_03385 IPR002942 RNA-binding S4 domain LJF99_03385 IPR036986 RNA-binding S4 domain superfamily LJF99_03395 IPR011527 ABC transporter type 1, transmembrane domain LJF99_03395 IPR003593 AAA+ ATPase domain LJF99_03395 IPR039421 Type I protein exporter LJF99_03395 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03395 IPR017871 ABC transporter, conserved site LJF99_03395 IPR003439 ABC transporter-like LJF99_03395 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_03405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_03405 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_03405 IPR005467 Histidine kinase domain LJF99_03405 IPR011006 CheY-like superfamily LJF99_03405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_03405 IPR019247 Histidine kinase BarA, N-terminal LJF99_03405 IPR036641 HPT domain superfamily LJF99_03405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_03405 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_03405 IPR001789 Signal transduction response regulator, receiver domain LJF99_03405 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_03405 IPR003660 HAMP domain LJF99_03410 IPR013766 Thioredoxin domain LJF99_03410 IPR036249 Thioredoxin-like superfamily LJF99_03410 IPR005746 Thioredoxin LJF99_03410 IPR017937 Thioredoxin, conserved site LJF99_03415 IPR001898 Solute carrier family 13 LJF99_03415 IPR031312 Sodium/sulphate symporter, conserved site LJF99_03420 IPR011833 Glycogen/starch/alpha-glucan phosphorylase LJF99_03420 IPR000811 Glycosyl transferase, family 35 LJF99_03420 IPR035090 Phosphorylase pyridoxal-phosphate attachment site LJF99_03445 IPR005802 Aminodeoxychorismate synthase, component I LJF99_03445 IPR005801 ADC synthase LJF99_03445 IPR006805 Anthranilate synthase component I, N-terminal LJF99_03445 IPR015890 Chorismate-utilising enzyme, C-terminal LJF99_03445 IPR019999 Anthranilate synthase component I-like LJF99_03450 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_03450 IPR023735 Uncharacterised nudix hydrolase NudL LJF99_03450 IPR000086 NUDIX hydrolase domain LJF99_03450 IPR000059 NUDIX hydrolase, NudL, conserved site LJF99_03455 IPR018227 Amino acid/polyamine transporter 2 LJF99_03455 IPR004694 Hydroxy amino acid transporter LJF99_03460 IPR001991 Sodium:dicarboxylate symporter LJF99_03460 IPR036458 Sodium:dicarboxylate symporter superfamily LJF99_03460 IPR023025 Serine/threonine transporter SstT LJF99_03465 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_03465 IPR018982 RQC domain LJF99_03465 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LJF99_03465 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03465 IPR002121 HRDC domain LJF99_03465 IPR001650 Helicase, C-terminal LJF99_03465 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial LJF99_03465 IPR004589 DNA helicase, ATP-dependent, RecQ type LJF99_03465 IPR011545 DEAD/DEAH box helicase domain LJF99_03465 IPR010997 HRDC-like superfamily LJF99_03465 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_03470 IPR010650 PrkA C-terminal domain LJF99_03470 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03470 IPR013153 PrkA AAA domain LJF99_03470 IPR016230 Serine-protein kinase, PrkA LJF99_03475 IPR006698 Uncharacterised protein family UPF0229 LJF99_03480 IPR007390 Sporulation stage V, protein R LJF99_03485 IPR028374 FadR, C-terminal domain LJF99_03485 IPR036390 Winged helix DNA-binding domain superfamily LJF99_03485 IPR014178 Fatty acid response transcription factor FadR LJF99_03485 IPR000524 Transcription regulator HTH, GntR LJF99_03485 IPR008920 Transcription regulator FadR/GntR, C-terminal LJF99_03485 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_03490 IPR004671 Na+/H+ antiporter NhaB LJF99_03495 IPR003752 Disulphide bond formation protein DsbB/BdbC LJF99_03495 IPR022920 Disulphide bond formation protein DsbB LJF99_03495 IPR023380 DsbB-like superfamily LJF99_03500 IPR032818 DedA family LJF99_03500 IPR032816 SNARE associated Golgi protein LJF99_03510 IPR024759 UvrB, YAD/RRR-motif-containing domain LJF99_03510 IPR041471 UvrB, interaction domain LJF99_03510 IPR004807 UvrABC system, subunit B LJF99_03510 IPR036876 UVR domain superfamily LJF99_03510 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03510 IPR001650 Helicase, C-terminal LJF99_03510 IPR006935 Helicase/UvrB, N-terminal LJF99_03510 IPR001943 UVR domain LJF99_03510 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_03520 IPR006512 YidE/YbjL duplication LJF99_03520 IPR006037 Regulator of K+ conductance, C-terminal LJF99_03520 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_03520 IPR023017 Transport protein YbjL, putative LJF99_03525 IPR023703 Membrane-bound lytic murein transglycosylase F LJF99_03525 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_03525 IPR023346 Lysozyme-like domain superfamily LJF99_03525 IPR008258 Transglycosylase SLT domain 1 LJF99_03540 IPR002823 Protein of unknown function DUF112, transmembrane LJF99_03545 IPR011006 CheY-like superfamily LJF99_03545 IPR013196 Helix-turn-helix, type 11 LJF99_03545 IPR024187 Signal transduction response regulator, citrate/malate metabolism LJF99_03545 IPR001789 Signal transduction response regulator, receiver domain LJF99_03545 IPR028141 Transcriptional regulator LJF99_03550 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_03550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_03550 IPR000014 PAS domain LJF99_03550 IPR035965 PAS domain superfamily LJF99_03550 IPR005467 Histidine kinase domain LJF99_03550 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_03550 IPR029151 Periplasmic sensor-like domain superfamily LJF99_03550 IPR039506 SpoOB, alpha-helical domain LJF99_03550 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB LJF99_03550 IPR033463 Single cache domain 3 LJF99_03550 IPR013767 PAS fold LJF99_03555 IPR000600 ROK family LJF99_03555 IPR036390 Winged helix DNA-binding domain superfamily LJF99_03555 IPR000835 MarR-type HTH domain LJF99_03555 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_03560 IPR004090 Chemotaxis methyl-accepting receptor LJF99_03560 IPR003660 HAMP domain LJF99_03560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_03560 IPR033480 Single Cache domain 2 LJF99_03565 IPR032710 NTF2-like domain superfamily LJF99_03565 IPR004027 SEC-C motif LJF99_03565 IPR023006 Uncharacterised protein family UPF0225 LJF99_03570 IPR006076 FAD dependent oxidoreductase LJF99_03570 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LJF99_03570 IPR007419 BFD-like [2Fe-2S]-binding domain LJF99_03570 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_03570 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase LJF99_03570 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit LJF99_03575 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit LJF99_03575 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LJF99_03575 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_03580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_03580 IPR009051 Alpha-helical ferredoxin LJF99_03580 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit LJF99_03580 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_03580 IPR004017 Cysteine-rich domain LJF99_03585 IPR011031 Multihaem cytochrome LJF99_03585 IPR036280 Multiheme cytochrome superfamily LJF99_03585 IPR003321 Cytochrome c552 LJF99_03585 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit LJF99_03590 IPR023155 Cytochrome c-552/4 LJF99_03590 IPR011031 Multihaem cytochrome LJF99_03590 IPR010177 Doubled CXXCH motif LJF99_03590 IPR036280 Multiheme cytochrome superfamily LJF99_03590 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit LJF99_03595 IPR006311 Twin-arginine translocation pathway, signal sequence LJF99_03595 IPR017567 Cytochrome c nitrite reductase, Fe-S protein LJF99_03595 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LJF99_03595 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_03595 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_03600 IPR005614 NrfD family LJF99_03600 IPR017566 NrfD LJF99_03605 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LJF99_03605 IPR002541 Cytochrome c assembly protein LJF99_03605 IPR003567 Cytochrome c-type biogenesis protein LJF99_03605 IPR003568 Cytochrome c-type biogenesis protein CcmF LJF99_03610 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE LJF99_03610 IPR013740 Redoxin LJF99_03610 IPR036249 Thioredoxin-like superfamily LJF99_03610 IPR017937 Thioredoxin, conserved site LJF99_03610 IPR013766 Thioredoxin domain LJF99_03615 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF LJF99_03615 IPR013026 Tetratricopeptide repeat-containing domain LJF99_03615 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_03615 IPR019734 Tetratricopeptide repeat LJF99_03615 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily LJF99_03615 IPR005616 CcmH/CycL/Ccl2/NrfF family LJF99_03625 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LJF99_03625 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LJF99_03625 IPR012338 Beta-lactamase/transpeptidase-like LJF99_03630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_03630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_03630 IPR013440 Tryptophanase LJF99_03630 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_03630 IPR011166 Beta-eliminating lyase family LJF99_03630 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase LJF99_03640 IPR007357 Deoxyribodipyrimidine photolyase-related protein LJF99_03640 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily LJF99_03640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_03645 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_03645 IPR006076 FAD dependent oxidoreductase LJF99_03645 IPR023080 D-amino acid dehydrogenase DadA LJF99_03655 IPR011059 Metal-dependent hydrolase, composite domain superfamily LJF99_03655 IPR032466 Metal-dependent hydrolase LJF99_03655 IPR013108 Amidohydrolase 3 LJF99_03670 IPR038071 UROD/MetE-like superfamily LJF99_03670 IPR006276 Cobalamin-independent methionine synthase LJF99_03670 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal LJF99_03670 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal LJF99_03675 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_03675 IPR000847 Transcription regulator HTH, LysR LJF99_03675 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain LJF99_03675 IPR005119 LysR, substrate-binding LJF99_03675 IPR036390 Winged helix DNA-binding domain superfamily LJF99_03685 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_03685 IPR010917 TonB-dependent receptor, conserved site LJF99_03685 IPR012910 TonB-dependent receptor, plug domain LJF99_03685 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_03685 IPR039423 TonB-dependent receptor-like LJF99_03685 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_03685 IPR010916 TonB box, conserved site LJF99_03685 IPR010105 TonB-dependent siderophore receptor LJF99_03690 IPR010499 Bacterial transcription activator, effector binding LJF99_03690 IPR029442 GyrI-like small molecule binding domain LJF99_03690 IPR020449 Transcription regulator HTH, AraC- type LJF99_03690 IPR011256 Regulatory factor, effector binding domain superfamily LJF99_03690 IPR018062 HTH domain AraC-type, conserved site LJF99_03690 IPR018060 DNA binding HTH domain, AraC-type LJF99_03690 IPR009057 Homeobox-like domain superfamily LJF99_03695 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_03695 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_03695 IPR011283 Acetoacetyl-CoA reductase LJF99_03695 IPR036291 NAD(P)-binding domain superfamily LJF99_03700 IPR000847 Transcription regulator HTH, LysR LJF99_03700 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_03700 IPR036390 Winged helix DNA-binding domain superfamily LJF99_03700 IPR005119 LysR, substrate-binding LJF99_03705 IPR016040 NAD(P)-binding domain LJF99_03705 IPR036291 NAD(P)-binding domain superfamily LJF99_03715 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_03715 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_03715 IPR006237 L-methionine gamma-lyase LJF99_03715 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LJF99_03715 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_03720 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LJF99_03720 IPR011765 Peptidase M16, N-terminal LJF99_03720 IPR001431 Peptidase M16, zinc-binding site LJF99_03720 IPR007863 Peptidase M16, C-terminal LJF99_03725 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site LJF99_03725 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type LJF99_03725 IPR012080 Aspartate-semialdehyde dehydrogenase LJF99_03725 IPR036291 NAD(P)-binding domain superfamily LJF99_03725 IPR000534 Semialdehyde dehydrogenase, NAD-binding LJF99_03725 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LJF99_03730 IPR041080 YcaO cyclodehydratase, C-terminal LJF99_03730 IPR003776 YcaO-like domain LJF99_03735 IPR023271 Aquaporin-like LJF99_03735 IPR000292 Formate/nitrite transporter LJF99_03735 IPR024002 Formate/nitrite transporter, conserved site LJF99_03735 IPR023999 Formate transporter FocA, putative LJF99_03740 IPR005949 Formate acetyltransferase LJF99_03740 IPR001150 Glycine radical domain LJF99_03740 IPR004184 Pyruvate formate lyase domain LJF99_03740 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LJF99_03745 IPR005358 Putative zinc- or iron-chelating domain containing protein LJF99_03745 IPR008228 Uncharacterised conserved protein UCP006173 LJF99_03750 IPR016102 Succinyl-CoA synthetase-like LJF99_03750 IPR036291 NAD(P)-binding domain superfamily LJF99_03750 IPR005811 ATP-citrate lyase/succinyl-CoA ligase LJF99_03750 IPR003781 CoA-binding LJF99_03750 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site LJF99_03750 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site LJF99_03750 IPR005810 Succinyl-CoA ligase, alpha subunit LJF99_03755 IPR011761 ATP-grasp fold LJF99_03755 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type LJF99_03755 IPR013815 ATP-grasp fold, subdomain 1 LJF99_03755 IPR005811 ATP-citrate lyase/succinyl-CoA ligase LJF99_03755 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site LJF99_03755 IPR005809 Succinate--CoA synthetase, beta subunit LJF99_03755 IPR016102 Succinyl-CoA synthetase-like LJF99_03760 IPR004167 Peripheral subunit-binding domain LJF99_03760 IPR006255 Dihydrolipoamide succinyltransferase LJF99_03760 IPR011053 Single hybrid motif LJF99_03760 IPR036625 E3-binding domain superfamily LJF99_03760 IPR000089 Biotin/lipoyl attachment LJF99_03760 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LJF99_03760 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LJF99_03760 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_03765 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain LJF99_03765 IPR011603 2-oxoglutarate dehydrogenase E1 component LJF99_03765 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal LJF99_03765 IPR005475 Transketolase-like, pyrimidine-binding domain LJF99_03765 IPR029061 Thiamin diphosphate-binding fold LJF99_03765 IPR001017 Dehydrogenase, E1 component LJF99_03765 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily LJF99_03770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_03770 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_03770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_03770 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein LJF99_03770 IPR009051 Alpha-helical ferredoxin LJF99_03770 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal LJF99_03770 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_03770 IPR012675 Beta-grasp domain superfamily LJF99_03775 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LJF99_03775 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_03775 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site LJF99_03775 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LJF99_03775 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LJF99_03775 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LJF99_03775 IPR011281 Succinate dehydrogenase, flavoprotein subunit LJF99_03775 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit LJF99_03780 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LJF99_03780 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor LJF99_03780 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit LJF99_03785 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LJF99_03785 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit LJF99_03785 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site LJF99_03785 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit LJF99_03790 IPR016142 Citrate synthase-like, large alpha subdomain LJF99_03790 IPR016143 Citrate synthase-like, small alpha subdomain LJF99_03790 IPR002020 Citrate synthase LJF99_03790 IPR019810 Citrate synthase active site LJF99_03790 IPR024176 Citrate synthase, bacterial-type LJF99_03790 IPR036969 Citrate synthase superfamily LJF99_03790 IPR010953 Citrate synthase, type I LJF99_03805 IPR016039 Thiolase-like LJF99_03805 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LJF99_03805 IPR014030 Beta-ketoacyl synthase, N-terminal LJF99_03805 IPR000794 Beta-ketoacyl synthase LJF99_03805 IPR018201 Beta-ketoacyl synthase, active site LJF99_03805 IPR014031 Beta-ketoacyl synthase, C-terminal LJF99_03810 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC LJF99_03810 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal LJF99_03810 IPR006076 FAD dependent oxidoreductase LJF99_03810 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_03810 IPR008471 MnmC-like methyltransferase LJF99_03820 IPR004669 C4-dicarboxylate anaerobic carrier LJF99_03820 IPR018385 C4-dicarboxylate anaerobic carrier-like LJF99_03835 IPR002725 Protein of unknown function DUF45 LJF99_03850 IPR042105 Ribosomal protein L31 superfamily LJF99_03850 IPR034704 L28p-like LJF99_03850 IPR027493 Ribosomal protein L31 type B LJF99_03850 IPR002150 Ribosomal protein L31 LJF99_03855 IPR000473 Ribosomal protein L36 LJF99_03855 IPR035977 Ribosomal protein L36 superfamily LJF99_03860 IPR015795 Pyruvate kinase, C-terminal LJF99_03860 IPR015806 Pyruvate kinase, insert domain superfamily LJF99_03860 IPR036918 Pyruvate kinase, C-terminal domain superfamily LJF99_03860 IPR015793 Pyruvate kinase, barrel LJF99_03860 IPR011037 Pyruvate kinase-like, insert domain superfamily LJF99_03860 IPR040442 Pyruvate kinase-like domain superfamily LJF99_03860 IPR018209 Pyruvate kinase, active site LJF99_03860 IPR001697 Pyruvate kinase LJF99_03860 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_03865 IPR036878 Glucose permease domain IIB LJF99_03865 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LJF99_03865 IPR003352 Phosphotransferase system, EIIC LJF99_03865 IPR013013 Phosphotransferase system, EIIC component, type 1 LJF99_03865 IPR001996 Phosphotransferase system, IIB component, type 1 LJF99_03865 IPR011299 PTS system glucose-specific IIBC component LJF99_03865 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LJF99_03870 IPR013780 Glycosyl hydrolase, all-beta LJF99_03870 IPR013739 Beta-galactosidase C-terminal LJF99_03870 IPR003476 Glycoside hydrolase, family 42 LJF99_03870 IPR029062 Class I glutamine amidotransferase-like LJF99_03870 IPR013738 Beta-galactosidase trimerisation LJF99_03870 IPR013529 Glycoside hydrolase, family 42, N-terminal LJF99_03870 IPR017853 Glycoside hydrolase superfamily LJF99_03875 IPR017853 Glycoside hydrolase superfamily LJF99_03875 IPR011683 Glycosyl hydrolase family 53 LJF99_03880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_03880 IPR035906 MetI-like superfamily LJF99_03885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_03885 IPR035906 MetI-like superfamily LJF99_03890 IPR006059 Bacterial extracellular solute-binding protein LJF99_03890 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein LJF99_03915 IPR003660 HAMP domain LJF99_03915 IPR004090 Chemotaxis methyl-accepting receptor LJF99_03915 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_03915 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LJF99_03915 IPR000727 Target SNARE coiled-coil homology domain LJF99_03925 IPR011683 Glycosyl hydrolase family 53 LJF99_03925 IPR017853 Glycoside hydrolase superfamily LJF99_03930 IPR011683 Glycosyl hydrolase family 53 LJF99_03930 IPR017853 Glycoside hydrolase superfamily LJF99_03935 IPR023738 Maltoporin LJF99_03935 IPR003192 Porin, LamB-type LJF99_03935 IPR036998 Porin, LamB-type superfamily LJF99_03940 IPR028082 Periplasmic binding protein-like I LJF99_03940 IPR000843 LacI-type HTH domain LJF99_03940 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_03945 IPR036291 NAD(P)-binding domain superfamily LJF99_03945 IPR016040 NAD(P)-binding domain LJF99_03945 IPR005886 UDP-glucose 4-epimerase LJF99_03950 IPR001937 Galactose-1-phosphate uridyl transferase, class I LJF99_03950 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site LJF99_03950 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal LJF99_03950 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal LJF99_03950 IPR036265 HIT-like superfamily LJF99_03955 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_03955 IPR006206 Mevalonate/galactokinase LJF99_03955 IPR006203 GHMP kinase, ATP-binding, conserved site LJF99_03955 IPR006204 GHMP kinase N-terminal domain LJF99_03955 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_03955 IPR013750 GHMP kinase, C-terminal domain LJF99_03955 IPR019539 Galactokinase galactose-binding domain LJF99_03955 IPR019741 Galactokinase, conserved site LJF99_03955 IPR000705 Galactokinase LJF99_03955 IPR036554 GHMP kinase, C-terminal domain superfamily LJF99_03955 IPR022963 Galactokinase, bacterial LJF99_03960 IPR018060 DNA binding HTH domain, AraC-type LJF99_03960 IPR003313 AraC-type arabinose-binding/dimerisation domain LJF99_03960 IPR009057 Homeobox-like domain superfamily LJF99_03960 IPR018062 HTH domain AraC-type, conserved site LJF99_03960 IPR037923 Transcription regulator HTH-like LJF99_03960 IPR020449 Transcription regulator HTH, AraC- type LJF99_03965 IPR001851 ABC transporter, permease LJF99_03970 IPR003593 AAA+ ATPase domain LJF99_03970 IPR003439 ABC transporter-like LJF99_03970 IPR017871 ABC transporter, conserved site LJF99_03970 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG LJF99_03970 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_03975 IPR026266 L-arabinose-binding periplasmic protein LJF99_03975 IPR001761 Periplasmic binding protein/LacI sugar binding domain LJF99_03975 IPR028082 Periplasmic binding protein-like I LJF99_03980 IPR018485 Carbohydrate kinase, FGGY, C-terminal LJF99_03980 IPR005929 Ribulokinase LJF99_03985 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF LJF99_03985 IPR001303 Class II aldolase/adducin N-terminal LJF99_03985 IPR036409 Class II aldolase/adducin N-terminal domain superfamily LJF99_03990 IPR024664 L-arabinose isomerase, C-terminal LJF99_03990 IPR038583 L-arabinose isomerase, N-terminal domain superfamily LJF99_03990 IPR004216 L-fucose/L-arabinose isomerase, C-terminal LJF99_03990 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily LJF99_03990 IPR003762 L-arabinose isomerase LJF99_03995 IPR005119 LysR, substrate-binding LJF99_03995 IPR000847 Transcription regulator HTH, LysR LJF99_03995 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_03995 IPR036390 Winged helix DNA-binding domain superfamily LJF99_04005 IPR003010 Carbon-nitrogen hydrolase LJF99_04005 IPR036526 Carbon-nitrogen hydrolase superfamily LJF99_04005 IPR001110 Uncharacterised protein family UPF0012, conserved site LJF99_04010 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_04010 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LJF99_04010 IPR001320 Ionotropic glutamate receptor LJF99_04010 IPR018313 Solute-binding protein family 3, conserved site LJF99_04020 IPR036397 Ribonuclease H superfamily LJF99_04020 IPR012337 Ribonuclease H-like superfamily LJF99_04020 IPR013520 Exonuclease, RNase T/DNA polymerase III LJF99_04020 IPR023607 Exodeoxyribonuclease I LJF99_04020 IPR038649 Exonuclease I, SH3-like domain superfamily LJF99_04020 IPR034747 Exonuclease I, SH3-like domain LJF99_04020 IPR034748 Exonuclease I, C-terminal alpha-helical domain LJF99_04020 IPR013620 Exodeoxyribonuclease I, C-terminal LJF99_04035 IPR005538 LrgA/CidA family LJF99_04035 IPR022957 Uncharacterised protein family UPF0299 LJF99_04040 IPR005261 Conserved hypothetical protein CHP00659 LJF99_04040 IPR007300 CidB/LrgB family LJF99_04045 IPR016192 APOBEC/CMP deaminase, zinc-binding LJF99_04045 IPR002125 Cytidine and deoxycytidylate deaminase domain LJF99_04045 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain LJF99_04045 IPR016193 Cytidine deaminase-like LJF99_04045 IPR020797 Cytidine deaminase, bacteria LJF99_04050 IPR020845 AMP-binding, conserved site LJF99_04050 IPR000873 AMP-dependent synthetase/ligase LJF99_04050 IPR042099 AMP-dependent synthetase-like superfamily LJF99_04055 IPR014987 Uncharacterised protein family YfcL LJF99_04065 IPR005496 Integral membrane protein TerC LJF99_04070 IPR006664 Outer membrane protein, bacterial LJF99_04070 IPR006665 OmpA-like domain LJF99_04070 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_04070 IPR036737 OmpA-like domain superfamily LJF99_04075 IPR029787 Nucleotide cyclase LJF99_04075 IPR003660 HAMP domain LJF99_04075 IPR000160 GGDEF domain LJF99_04075 IPR033417 Periplasmic sensor domain CHASE8 LJF99_04080 IPR025293 YfiR/HmsC-like LJF99_04085 IPR025944 Sigma-54 interaction domain, conserved site LJF99_04085 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_04085 IPR009057 Homeobox-like domain superfamily LJF99_04085 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_04085 IPR035965 PAS domain superfamily LJF99_04085 IPR003593 AAA+ ATPase domain LJF99_04085 IPR002912 ACT domain LJF99_04085 IPR030828 TyrR family, helix-turn-helix domain LJF99_04085 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04085 IPR000014 PAS domain LJF99_04085 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_04090 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily LJF99_04090 IPR001533 Pterin 4 alpha carbinolamine dehydratase LJF99_04095 IPR019774 Aromatic amino acid hydroxylase, C-terminal LJF99_04095 IPR036951 Aromatic amino acid hydroxylase superfamily LJF99_04095 IPR005960 Phenylalanine-4-hydroxylase, monomeric form LJF99_04095 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site LJF99_04095 IPR001273 Aromatic amino acid hydroxylase LJF99_04095 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily LJF99_04100 IPR006507 Uncharacterised protein family UPF0283 LJF99_04100 IPR021147 Protein of unknown function DUF697 LJF99_04105 IPR007413 Protein of unknown function DUF463, YcjX-like protein LJF99_04115 IPR009554 Phage shock protein B LJF99_04120 IPR007157 PspA/IM30 LJF99_04120 IPR014319 Phage shock protein, PspA LJF99_04125 IPR002197 DNA binding HTH domain, Fis-type LJF99_04125 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04125 IPR003593 AAA+ ATPase domain LJF99_04125 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_04125 IPR025944 Sigma-54 interaction domain, conserved site LJF99_04125 IPR014317 Transcription activator PspF LJF99_04125 IPR009057 Homeobox-like domain superfamily LJF99_04125 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_04130 IPR023765 Solute-binding protein family 5, conserved site LJF99_04130 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_04130 IPR039424 Solute-binding protein family 5 LJF99_04130 IPR000914 Solute-binding protein family 5 domain LJF99_04135 IPR035906 MetI-like superfamily LJF99_04135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_04140 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_04140 IPR035906 MetI-like superfamily LJF99_04140 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LJF99_04145 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04145 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LJF99_04145 IPR003439 ABC transporter-like LJF99_04145 IPR003593 AAA+ ATPase domain LJF99_04150 IPR003439 ABC transporter-like LJF99_04150 IPR017871 ABC transporter, conserved site LJF99_04150 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04150 IPR003593 AAA+ ATPase domain LJF99_04160 IPR029055 Nucleophile aminohydrolases, N-terminal LJF99_04160 IPR000836 Phosphoribosyltransferase domain LJF99_04160 IPR029057 Phosphoribosyltransferase-like LJF99_04160 IPR005854 Amidophosphoribosyltransferase LJF99_04160 IPR035584 Amidophosphoribosyltransferase, N-terminal LJF99_04160 IPR017932 Glutamine amidotransferase type 2 domain LJF99_04165 IPR003825 Colicin V production, CvpA LJF99_04170 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LJF99_04170 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_04170 IPR002317 Serine-tRNA ligase, type1 LJF99_04170 IPR015866 Serine-tRNA synthetase, type1, N-terminal LJF99_04170 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily LJF99_04170 IPR033729 Serine-tRNA ligase catalytic core domain LJF99_04170 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LJF99_04175 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04175 IPR021886 MgsA AAA+ ATPase C-terminal LJF99_04175 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LJF99_04175 IPR032423 AAA C-terminal domain LJF99_04175 IPR003593 AAA+ ATPase domain LJF99_04175 IPR003959 ATPase, AAA-type, core LJF99_04180 IPR029046 Lipoprotein localisation LolA/LolB/LppX LJF99_04180 IPR004564 Outer membrane lipoprotein carrier protein LolA-like LJF99_04180 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria LJF99_04185 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04185 IPR036390 Winged helix DNA-binding domain superfamily LJF99_04185 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_04185 IPR018541 FtsK gamma domain LJF99_04185 IPR041027 FtsK alpha domain LJF99_04185 IPR025199 DNA translocase FtsK, 4TM region LJF99_04185 IPR002543 FtsK domain LJF99_04190 IPR036390 Winged helix DNA-binding domain superfamily LJF99_04190 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LJF99_04190 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LJF99_04190 IPR019888 Transcription regulator AsnC-type LJF99_04190 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_04190 IPR000485 AsnC-type HTH domain LJF99_04190 IPR011991 ArsR-like helix-turn-helix domain LJF99_04190 IPR011008 Dimeric alpha-beta barrel LJF99_04205 IPR023753 FAD/NAD(P)-binding domain LJF99_04205 IPR005982 Thioredoxin reductase LJF99_04205 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LJF99_04205 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_04210 IPR029787 Nucleotide cyclase LJF99_04210 IPR033424 Membrane-associated sensor domain LJF99_04210 IPR000160 GGDEF domain LJF99_04215 IPR008816 Glycine zipper 2TM domain LJF99_04220 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal LJF99_04220 IPR016181 Acyl-CoA N-acyltransferase LJF99_04220 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase LJF99_04225 IPR016181 Acyl-CoA N-acyltransferase LJF99_04225 IPR017138 Aspartate/glutamate leucyltransferase LJF99_04225 IPR030700 N-end rule aminoacyl transferase LJF99_04225 IPR007472 N-end rule aminoacyl transferase, C-terminal LJF99_04225 IPR007471 N-end aminoacyl transferase, N-terminal LJF99_04230 IPR004368 Translation initiation factor IF-1 LJF99_04230 IPR022967 RNA-binding domain, S1 LJF99_04230 IPR006196 RNA-binding domain, S1, IF1 type LJF99_04230 IPR012340 Nucleic acid-binding, OB-fold LJF99_04235 IPR019489 Clp ATPase, C-terminal LJF99_04235 IPR041546 ClpA/ClpB, AAA lid domain LJF99_04235 IPR036628 Clp, N-terminal domain superfamily LJF99_04235 IPR018368 ClpA/B, conserved site 1 LJF99_04235 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA LJF99_04235 IPR004176 Clp, N-terminal LJF99_04235 IPR003593 AAA+ ATPase domain LJF99_04235 IPR003959 ATPase, AAA-type, core LJF99_04235 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04235 IPR028299 ClpA/B, conserved site 2 LJF99_04235 IPR001270 ClpA/B family LJF99_04240 IPR022935 ATP-dependent Clp protease adaptor protein ClpS LJF99_04240 IPR003769 Adaptor protein ClpS, core LJF99_04240 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LJF99_04245 IPR011129 Cold shock domain LJF99_04245 IPR012340 Nucleic acid-binding, OB-fold LJF99_04245 IPR012156 Cold shock, CspA LJF99_04245 IPR012751 CspD, cold shock LJF99_04245 IPR019844 Cold-shock (CSD) domain LJF99_04245 IPR002059 Cold-shock protein, DNA-binding LJF99_04250 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase LJF99_04250 IPR036291 NAD(P)-binding domain superfamily LJF99_04250 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LJF99_04250 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site LJF99_04250 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LJF99_04300 IPR010623 Type VI secretion system IcmF, C-terminal LJF99_04300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04300 IPR017731 Type VI secretion system, IcmF LJF99_04300 IPR025743 IcmF-related, N-terminal domain LJF99_04300 IPR009612 IcmF-related LJF99_04310 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_04310 IPR003593 AAA+ ATPase domain LJF99_04310 IPR009057 Homeobox-like domain superfamily LJF99_04310 IPR002197 DNA binding HTH domain, Fis-type LJF99_04310 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04310 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_04310 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_04310 IPR025944 Sigma-54 interaction domain, conserved site LJF99_04315 IPR017729 Type VI secretion system, ATPase ClpV1 LJF99_04315 IPR019489 Clp ATPase, C-terminal LJF99_04315 IPR036628 Clp, N-terminal domain superfamily LJF99_04315 IPR018368 ClpA/B, conserved site 1 LJF99_04315 IPR003959 ATPase, AAA-type, core LJF99_04315 IPR004176 Clp, N-terminal LJF99_04315 IPR041546 ClpA/ClpB, AAA lid domain LJF99_04315 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04315 IPR003593 AAA+ ATPase domain LJF99_04315 IPR001270 ClpA/B family LJF99_04325 IPR010263 Type VI secretion protein, VC_A0114 LJF99_04345 IPR010272 Type VI secretion system, TssF-like LJF99_04380 IPR011547 SLC26A/SulP transporter domain LJF99_04380 IPR001902 SLC26A/SulP transporter LJF99_04380 IPR002645 STAS domain LJF99_04380 IPR036513 STAS domain superfamily LJF99_04380 IPR018045 Sulphate anion transporter, conserved site LJF99_04395 IPR009057 Homeobox-like domain superfamily LJF99_04395 IPR012337 Ribonuclease H-like superfamily LJF99_04395 IPR038717 Tc1-like transposase, DDE domain LJF99_04395 IPR025959 Winged helix-turn helix domain LJF99_04425 IPR000620 EamA domain LJF99_04430 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA LJF99_04430 IPR003667 NqrDE/RnfAE LJF99_04435 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_04435 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_04435 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria LJF99_04435 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB LJF99_04435 IPR007202 4Fe-4S domain LJF99_04440 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_04440 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_04440 IPR009051 Alpha-helical ferredoxin LJF99_04440 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC LJF99_04440 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain LJF99_04440 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily LJF99_04440 IPR026902 RnfC Barrel sandwich hybrid domain LJF99_04440 IPR019554 Soluble ligand binding domain LJF99_04445 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD LJF99_04445 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D LJF99_04450 IPR007329 FMN-binding LJF99_04450 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG LJF99_04455 IPR003667 NqrDE/RnfAE LJF99_04455 IPR010968 Ion-translocating oxidoreductase complex subunit E LJF99_04460 IPR011257 DNA glycosylase LJF99_04460 IPR004036 Endonuclease III-like, conserved site-2 LJF99_04460 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif LJF99_04460 IPR004035 Endonuclease III, iron-sulphur binding site LJF99_04460 IPR003265 HhH-GPD domain LJF99_04460 IPR000445 Helix-hairpin-helix motif LJF99_04460 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LJF99_04460 IPR005759 Endonuclease III LJF99_04465 IPR018146 Glyoxalase I, conserved site LJF99_04465 IPR037523 Vicinal oxygen chelate (VOC) domain LJF99_04465 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LJF99_04465 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LJF99_04465 IPR004361 Glyoxalase I LJF99_04470 IPR041544 MotY N-terminal domain LJF99_04470 IPR006665 OmpA-like domain LJF99_04470 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_04470 IPR036737 OmpA-like domain superfamily LJF99_04475 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_04475 IPR004090 Chemotaxis methyl-accepting receptor LJF99_04475 IPR003660 HAMP domain LJF99_04475 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LJF99_04475 IPR000727 Target SNARE coiled-coil homology domain LJF99_04480 IPR013520 Exonuclease, RNase T/DNA polymerase III LJF99_04480 IPR005987 Ribonuclease T LJF99_04480 IPR012337 Ribonuclease H-like superfamily LJF99_04480 IPR036397 Ribonuclease H superfamily LJF99_04485 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LJF99_04485 IPR032813 Putative Na+/H+ antiporter, N-terminal LJF99_04490 IPR000014 PAS domain LJF99_04490 IPR029787 Nucleotide cyclase LJF99_04490 IPR035919 EAL domain superfamily LJF99_04490 IPR000160 GGDEF domain LJF99_04490 IPR001633 EAL domain LJF99_04490 IPR035965 PAS domain superfamily LJF99_04490 IPR005330 MHYT domain LJF99_04500 IPR011545 DEAD/DEAH box helicase domain LJF99_04500 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain LJF99_04500 IPR034415 CsdA, RNA recognition motif LJF99_04500 IPR028618 ATP-dependent RNA helicase DeaD LJF99_04500 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_04500 IPR001650 Helicase, C-terminal LJF99_04500 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LJF99_04500 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04500 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_04500 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_04505 IPR029069 HotDog domain superfamily LJF99_04505 IPR003736 Phenylacetic acid degradation-related domain LJF99_04505 IPR006683 Thioesterase domain LJF99_04515 IPR016164 FAD-linked oxidase-like, C-terminal LJF99_04515 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_04515 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_04515 IPR016166 FAD-binding domain, PCMH-type LJF99_04515 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_04515 IPR004113 FAD-linked oxidase, C-terminal LJF99_04515 IPR009051 Alpha-helical ferredoxin LJF99_04515 IPR006094 FAD linked oxidase, N-terminal LJF99_04525 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_04525 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_04525 IPR005496 Integral membrane protein TerC LJF99_04525 IPR000644 CBS domain LJF99_04525 IPR005170 Transporter-associated domain LJF99_04530 IPR013785 Aldolase-type TIM barrel LJF99_04530 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LJF99_04535 IPR001365 Adenosine/AMP deaminase domain LJF99_04535 IPR028892 Adenine deaminase type 2 LJF99_04535 IPR006330 Adenosine/adenine deaminase LJF99_04535 IPR032466 Metal-dependent hydrolase LJF99_04540 IPR036412 HAD-like superfamily LJF99_04540 IPR006357 HAD-superfamily hydrolase, subfamily IIA LJF99_04540 IPR023214 HAD superfamily LJF99_04545 IPR003148 Regulator of K+ conductance, N-terminal LJF99_04545 IPR036291 NAD(P)-binding domain superfamily LJF99_04545 IPR038770 Sodium/solute symporter superfamily LJF99_04545 IPR004771 K+/H+ exchanger LJF99_04545 IPR006153 Cation/H+ exchanger LJF99_04555 IPR033738 Asparagine synthase, N-terminal domain LJF99_04555 IPR029055 Nucleophile aminohydrolases, N-terminal LJF99_04555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_04555 IPR006426 Asparagine synthase, glutamine-hydrolyzing LJF99_04555 IPR017932 Glutamine amidotransferase type 2 domain LJF99_04555 IPR001962 Asparagine synthase LJF99_04560 IPR005322 Peptidase C69, dipeptidase A LJF99_04565 IPR012337 Ribonuclease H-like superfamily LJF99_04565 IPR025959 Winged helix-turn helix domain LJF99_04565 IPR038717 Tc1-like transposase, DDE domain LJF99_04565 IPR009057 Homeobox-like domain superfamily LJF99_04575 IPR010987 Glutathione S-transferase, C-terminal-like LJF99_04575 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LJF99_04575 IPR004045 Glutathione S-transferase, N-terminal LJF99_04575 IPR004046 Glutathione S-transferase, C-terminal LJF99_04575 IPR036249 Thioredoxin-like superfamily LJF99_04580 IPR005955 Glutathione S-transferases, class Zeta LJF99_04580 IPR034333 Glutathione S-transferases, class Zeta , N-terminal LJF99_04580 IPR034330 Glutathione S-transferases, class Zeta , C-terminal LJF99_04580 IPR036249 Thioredoxin-like superfamily LJF99_04580 IPR004046 Glutathione S-transferase, C-terminal LJF99_04580 IPR040079 Glutathione Transferase family LJF99_04580 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LJF99_04580 IPR010987 Glutathione S-transferase, C-terminal-like LJF99_04580 IPR004045 Glutathione S-transferase, N-terminal LJF99_04595 IPR037523 Vicinal oxygen chelate (VOC) domain LJF99_04595 IPR005956 4-hydroxyphenylpyruvate dioxygenase LJF99_04595 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal LJF99_04595 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal LJF99_04595 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LJF99_04595 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LJF99_04605 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_04605 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LJF99_04605 IPR006508 Pseudouridine synthase, RluA-like LJF99_04605 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_04615 IPR000014 PAS domain LJF99_04615 IPR013655 PAS fold-3 LJF99_04615 IPR004090 Chemotaxis methyl-accepting receptor LJF99_04615 IPR003660 HAMP domain LJF99_04615 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_04615 IPR001610 PAC motif LJF99_04615 IPR035965 PAS domain superfamily LJF99_04625 IPR006214 Bax inhibitor 1-related LJF99_04625 IPR006213 Bax inhibitor 1, conserved site LJF99_04630 IPR010020 Integral membrane protein, YccS/YhfK LJF99_04630 IPR032692 Integral membrane protein YccS, N-terminal LJF99_04630 IPR010019 Integral membrane protein, YccS LJF99_04635 IPR042072 DsrC-like protein, C-terminal domain LJF99_04635 IPR025526 DsrC-like domain superfamily LJF99_04635 IPR007453 Sulphur transfer protein DsrC/TusE LJF99_04640 IPR032898 Cell division protein DedD LJF99_04640 IPR007730 Sporulation-like domain LJF99_04640 IPR036680 Sporulation-like domain superfamily LJF99_04645 IPR004101 Mur ligase, C-terminal LJF99_04645 IPR013221 Mur ligase, central LJF99_04645 IPR036615 Mur ligase, C-terminal domain superfamily LJF99_04645 IPR018109 Folylpolyglutamate synthetase, conserved site LJF99_04645 IPR001645 Folylpolyglutamate synthetase LJF99_04645 IPR036565 Mur-like, catalytic domain superfamily LJF99_04650 IPR041010 Acetyl-coA carboxylase zinc finger domain LJF99_04650 IPR034733 Acetyl-CoA carboxylase LJF99_04650 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit LJF99_04650 IPR029045 ClpP/crotonase-like domain superfamily LJF99_04650 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal LJF99_04655 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain LJF99_04655 IPR001406 Pseudouridine synthase I, TruA LJF99_04655 IPR020095 Pseudouridine synthase I, TruA, C-terminal LJF99_04655 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_04665 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LJF99_04665 IPR036291 NAD(P)-binding domain superfamily LJF99_04665 IPR000534 Semialdehyde dehydrogenase, NAD-binding LJF99_04665 IPR012080 Aspartate-semialdehyde dehydrogenase LJF99_04665 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type LJF99_04670 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_04670 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LJF99_04670 IPR020921 Erythronate-4-phosphate dehydrogenase LJF99_04670 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain LJF99_04670 IPR036291 NAD(P)-binding domain superfamily LJF99_04670 IPR038251 PdxB, dimerisation domain superfamily LJF99_04675 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LJF99_04675 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LJF99_04680 IPR004872 Lipoprotein NlpA family LJF99_04700 IPR015500 Peptidase S8, subtilisin-related LJF99_04700 IPR023828 Peptidase S8, subtilisin, Ser-active site LJF99_04700 IPR023827 Peptidase S8, subtilisin, Asp-active site LJF99_04700 IPR036852 Peptidase S8/S53 domain superfamily LJF99_04700 IPR002884 P domain LJF99_04700 IPR008979 Galactose-binding-like domain superfamily LJF99_04700 IPR000209 Peptidase S8/S53 domain LJF99_04710 IPR026891 Fibronectin type III-like domain LJF99_04710 IPR019800 Glycoside hydrolase, family 3, active site LJF99_04710 IPR002772 Glycoside hydrolase family 3 C-terminal domain LJF99_04710 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily LJF99_04710 IPR001764 Glycoside hydrolase, family 3, N-terminal LJF99_04710 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily LJF99_04710 IPR017853 Glycoside hydrolase superfamily LJF99_04710 IPR013783 Immunoglobulin-like fold LJF99_04720 IPR036637 Phosphohistidine domain superfamily LJF99_04720 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_04720 IPR040442 Pyruvate kinase-like domain superfamily LJF99_04720 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding LJF99_04720 IPR023151 PEP-utilising enzyme, conserved site LJF99_04720 IPR013815 ATP-grasp fold, subdomain 1 LJF99_04720 IPR018274 PEP-utilising enzyme, active site LJF99_04720 IPR006319 Phosphoenolpyruvate synthase LJF99_04720 IPR008279 PEP-utilising enzyme, mobile domain LJF99_04720 IPR000121 PEP-utilising enzyme, C-terminal LJF99_04725 IPR005177 Bifunctional kinase-pyrophosphorylase LJF99_04725 IPR026530 Phosphoenolpyruvate synthase regulatory protein LJF99_04735 IPR004841 Amino acid permease/ SLC12A domain LJF99_04735 IPR004840 Amino acid permease, conserved site LJF99_04765 IPR004923 Iron permease FTR1/Fip1/EfeU LJF99_04765 IPR036259 MFS transporter superfamily LJF99_04765 IPR005217 Iron permease FTR1-like LJF99_04770 IPR002937 Amine oxidase LJF99_04770 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_04770 IPR001613 Flavin amine oxidase LJF99_04795 IPR004680 Citrate transporter-like domain LJF99_04810 IPR003838 ABC transporter permease protein domain LJF99_04810 IPR025857 MacB-like periplasmic core domain LJF99_04825 IPR003416 MgtC/SapB/SrpB/YhiD family LJF99_04865 IPR002569 Peptide methionine sulphoxide reductase MsrA LJF99_04865 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily LJF99_04870 IPR010167 Amino-acid N-acetyltransferase LJF99_04870 IPR033719 N-acetylglutamate synthase, kinase-like domain LJF99_04870 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_04870 IPR000182 GNAT domain LJF99_04870 IPR036393 Acetylglutamate kinase-like superfamily LJF99_04870 IPR016181 Acyl-CoA N-acyltransferase LJF99_04875 IPR036393 Acetylglutamate kinase-like superfamily LJF99_04875 IPR002912 ACT domain LJF99_04875 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain LJF99_04875 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_04875 IPR005260 Aspartate kinase, monofunctional class LJF99_04875 IPR001341 Aspartate kinase LJF99_04875 IPR018042 Aspartate kinase, conserved site LJF99_04885 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_04885 IPR000917 Sulfatase, N-terminal LJF99_04890 IPR003507 Peptidase family S66 LJF99_04890 IPR040921 LD-carboxypeptidase, C-terminal LJF99_04890 IPR040449 LD-carboxypeptidase, N-terminal LJF99_04890 IPR029062 Class I glutamine amidotransferase-like LJF99_04890 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily LJF99_04890 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal LJF99_04900 IPR002765 Uncharacterised protein family UPF0145 LJF99_04900 IPR035439 UPF0145 domain superfamily LJF99_04905 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_04905 IPR023753 FAD/NAD(P)-binding domain LJF99_04910 IPR029058 Alpha/Beta hydrolase fold LJF99_04910 IPR022987 Uncharacterised protein family UPF0227 LJF99_04910 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LJF99_04915 IPR004438 Peptidase M3B, oligoendopeptidase F LJF99_04915 IPR001567 Peptidase M3A/M3B catalytic domain LJF99_04915 IPR013647 Oligopeptidase F, N-terminal domain LJF99_04915 IPR042088 Oligoendopeptidase F, C-terminal domain LJF99_04925 IPR008526 Inner membrane protein YedI LJF99_04935 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily LJF99_04935 IPR036676 PurM-like, C-terminal domain superfamily LJF99_04935 IPR010918 PurM-like, C-terminal domain LJF99_04935 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain LJF99_04935 IPR036921 PurM-like, N-terminal domain superfamily LJF99_04935 IPR017926 Glutamine amidotransferase LJF99_04935 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal LJF99_04935 IPR029062 Class I glutamine amidotransferase-like LJF99_04935 IPR010073 Phosphoribosylformylglycinamidine synthase PurL LJF99_04940 IPR023346 Lysozyme-like domain superfamily LJF99_04940 IPR023703 Membrane-bound lytic murein transglycosylase F LJF99_04940 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_04940 IPR000189 Prokaryotic transglycosylase, active site LJF99_04940 IPR008258 Transglycosylase SLT domain 1 LJF99_04950 IPR029037 YfgJ-like LJF99_04950 IPR010807 Protein of unknown function DUF1407 LJF99_04955 IPR016484 GTP-binding protein EngA LJF99_04955 IPR006073 GTP binding domain LJF99_04955 IPR031166 EngA-type guanine nucleotide-binding (G) domain LJF99_04955 IPR032859 GTPase Der, C-terminal KH-domain-like LJF99_04955 IPR015946 K homology domain-like, alpha/beta LJF99_04955 IPR005225 Small GTP-binding protein domain LJF99_04955 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_04960 IPR002372 Pyrrolo-quinoline quinone repeat LJF99_04960 IPR017687 Outer membrane protein assembly factor BamB LJF99_04960 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LJF99_04960 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LJF99_04960 IPR015943 WD40/YVTN repeat-like-containing domain superfamily LJF99_04965 IPR026039 Uncharacterised protein family UPF0070 LJF99_04965 IPR018704 Tetratricopeptide repeat-like domain LJF99_04965 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_04970 IPR004154 Anticodon-binding LJF99_04970 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain LJF99_04970 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_04970 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit LJF99_04970 IPR033656 Histidyl-anticodon-binding LJF99_04970 IPR036621 Anticodon-binding domain superfamily LJF99_04970 IPR015807 Histidine-tRNA ligase LJF99_04975 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial LJF99_04975 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type LJF99_04975 IPR011005 Dihydropteroate synthase-like LJF99_04980 IPR001387 Cro/C1-type helix-turn-helix domain LJF99_04980 IPR025194 Domain of unknown function DUF4115 LJF99_04980 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_04980 IPR023690 Cytoskeleton protein RodZ LJF99_04990 IPR007197 Radical SAM LJF99_04990 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr LJF99_04990 IPR013785 Aldolase-type TIM barrel LJF99_04990 IPR040072 Methyltransferase (Class A) LJF99_04990 IPR027492 Dual-specificity RNA methyltransferase RlmN LJF99_04995 IPR034907 Nucleoside diphosphate kinase-like domain LJF99_04995 IPR001564 Nucleoside diphosphate kinase LJF99_04995 IPR023005 Nucleoside diphosphate kinase, active site LJF99_04995 IPR036850 Nucleoside diphosphate kinase-like domain superfamily LJF99_05000 IPR001346 Interferon regulatory factor DNA-binding domain LJF99_05000 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LJF99_05000 IPR008330 Peptidase M17, peptidase B LJF99_05000 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LJF99_05005 IPR001346 Interferon regulatory factor DNA-binding domain LJF99_05005 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LJF99_05005 IPR008330 Peptidase M17, peptidase B LJF99_05005 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LJF99_05010 IPR001055 Adrenodoxin LJF99_05010 IPR018298 Adrenodoxin, iron-sulphur binding site LJF99_05010 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_05010 IPR012675 Beta-grasp domain superfamily LJF99_05010 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria LJF99_05010 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_05015 IPR010236 ISC system FeS cluster assembly, HscA chaperone LJF99_05015 IPR013126 Heat shock protein 70 family LJF99_05015 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily LJF99_05015 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily LJF99_05015 IPR018181 Heat shock protein 70, conserved site LJF99_05015 IPR042039 HscA chaperone, nucleotide-binding domain LJF99_05020 IPR036869 Chaperone J-domain superfamily LJF99_05020 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain LJF99_05020 IPR036386 HscB, C-terminal domain superfamily LJF99_05020 IPR004640 Co-chaperone Hsc20 LJF99_05020 IPR001623 DnaJ domain LJF99_05025 IPR017870 FeS cluster insertion, C-terminal, conserved site LJF99_05025 IPR016092 FeS cluster insertion protein LJF99_05025 IPR035903 HesB-like domain superfamily LJF99_05025 IPR011302 Iron-binding protein IscA, proteobacteria LJF99_05025 IPR000361 FeS cluster biogenesis LJF99_05030 IPR011339 ISC system FeS cluster assembly, IscU scaffold LJF99_05030 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal LJF99_05035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_05035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_05035 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LJF99_05035 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_05035 IPR016454 Cysteine desulfurase LJF99_05035 IPR010240 Cysteine desulfurase IscS LJF99_05035 IPR000192 Aminotransferase class V domain LJF99_05040 IPR010242 Transcription factor HTH, IscR LJF99_05040 IPR036390 Winged helix DNA-binding domain superfamily LJF99_05040 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_05040 IPR000944 Transcription regulator Rrf2-type LJF99_05040 IPR030489 Transcription regulator Rrf2-type, conserved site LJF99_05045 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LJF99_05045 IPR001537 tRNA/rRNA methyltransferase, SpoU type LJF99_05045 IPR004384 RNA methyltransferase TrmJ/LasT LJF99_05045 IPR029028 Alpha/beta knot methyltransferases LJF99_05055 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 LJF99_05055 IPR036527 SCP2 sterol-binding domain superfamily LJF99_05055 IPR003033 SCP2 sterol-binding domain LJF99_05055 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT LJF99_05060 IPR001539 Peptidase U32 LJF99_05060 IPR036206 Thiamin phosphate synthase superfamily LJF99_05065 IPR001539 Peptidase U32 LJF99_05070 IPR019734 Tetratricopeptide repeat LJF99_05070 IPR013105 Tetratricopeptide repeat 2 LJF99_05070 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_05070 IPR013026 Tetratricopeptide repeat-containing domain LJF99_05070 IPR023605 Lipoprotein NlpI LJF99_05075 IPR036873 Rhodanese-like domain superfamily LJF99_05075 IPR001307 Thiosulphate sulfurtransferase, conserved site LJF99_05075 IPR001763 Rhodanese-like domain LJF99_05080 IPR005665 Protein-export membrane protein SecF, bacterial LJF99_05080 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LJF99_05080 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LJF99_05080 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LJF99_05085 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LJF99_05085 IPR027398 SecD export protein N-terminal TM domain LJF99_05085 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LJF99_05085 IPR001036 Acriflavin resistance protein LJF99_05085 IPR005791 Protein translocase subunit SecD LJF99_05085 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LJF99_05090 IPR003849 Preprotein translocase YajC LJF99_05095 IPR004803 tRNA-guanine transglycosylase LJF99_05095 IPR036511 Queuine tRNA-ribosyltransferase-like LJF99_05095 IPR002616 tRNA-guanine(15) transglycosylase-like LJF99_05100 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA LJF99_05100 IPR042118 QueA, domain 1 LJF99_05100 IPR042119 QueA, domain 2 LJF99_05100 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily LJF99_05105 IPR000644 CBS domain LJF99_05110 IPR017559 Alkyl hydroperoxide reductase subunit C LJF99_05110 IPR013766 Thioredoxin domain LJF99_05110 IPR036249 Thioredoxin-like superfamily LJF99_05110 IPR019479 Peroxiredoxin, C-terminal LJF99_05110 IPR024706 Peroxiredoxin, AhpC-type LJF99_05110 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LJF99_05115 IPR012336 Thioredoxin-like fold LJF99_05115 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LJF99_05115 IPR036249 Thioredoxin-like superfamily LJF99_05115 IPR002109 Glutaredoxin LJF99_05115 IPR023753 FAD/NAD(P)-binding domain LJF99_05115 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_05115 IPR012081 Alkyl hydroperoxide reductase subunit F LJF99_05120 IPR023745 MSF-type transporter, YcaD LJF99_05120 IPR020846 Major facilitator superfamily domain LJF99_05120 IPR036259 MFS transporter superfamily LJF99_05120 IPR011701 Major facilitator superfamily LJF99_05130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_05130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_05130 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_05130 IPR020581 Glycine cleavage system P protein LJF99_05130 IPR003437 Glycine dehydrogenase (decarboxylating) LJF99_05135 IPR002930 Glycine cleavage system H-protein LJF99_05135 IPR000089 Biotin/lipoyl attachment LJF99_05135 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LJF99_05135 IPR017453 Glycine cleavage system H-protein, subgroup LJF99_05135 IPR011053 Single hybrid motif LJF99_05135 IPR033753 Glycine cleavage system H-protein/Simiate LJF99_05140 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 LJF99_05140 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal LJF99_05140 IPR006222 Aminomethyltransferase, folate-binding domain LJF99_05140 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain LJF99_05140 IPR028896 Aminomethyltransferase-like LJF99_05140 IPR022903 Glycine cleavage system T protein, bacteria LJF99_05140 IPR006223 Glycine cleavage system T protein LJF99_05145 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 LJF99_05145 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site LJF99_05145 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_05145 IPR002938 FAD-binding domain LJF99_05150 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 LJF99_05150 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase LJF99_05150 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site LJF99_05150 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_05150 IPR002938 FAD-binding domain LJF99_05155 IPR011978 Uncharacterised protein family UPF0149 LJF99_05155 IPR036255 YgfB-like superfamily LJF99_05160 IPR023771 Cell division protein ZapA, eubacteria LJF99_05160 IPR036192 Cell division protein ZapA-like superfamily LJF99_05160 IPR007838 Cell division protein ZapA-like LJF99_05175 IPR003786 Sulfur carrier protein FdhD LJF99_05175 IPR016193 Cytidine deaminase-like LJF99_05180 IPR005119 LysR, substrate-binding LJF99_05180 IPR000847 Transcription regulator HTH, LysR LJF99_05180 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_05180 IPR036390 Winged helix DNA-binding domain superfamily LJF99_05185 IPR020846 Major facilitator superfamily domain LJF99_05185 IPR036259 MFS transporter superfamily LJF99_05185 IPR004734 Multidrug resistance protein LJF99_05185 IPR011701 Major facilitator superfamily LJF99_05190 IPR003593 AAA+ ATPase domain LJF99_05190 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_05190 IPR017871 ABC transporter, conserved site LJF99_05190 IPR003439 ABC transporter-like LJF99_05195 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LJF99_05195 IPR035906 MetI-like superfamily LJF99_05195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_05200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_05200 IPR035906 MetI-like superfamily LJF99_05210 IPR004045 Glutathione S-transferase, N-terminal LJF99_05210 IPR004046 Glutathione S-transferase, C-terminal LJF99_05210 IPR036249 Thioredoxin-like superfamily LJF99_05210 IPR010987 Glutathione S-transferase, C-terminal-like LJF99_05210 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LJF99_05220 IPR033942 Inositol monophosphatase LJF99_05220 IPR022337 Inositol monophosphatase, SuhB LJF99_05220 IPR020550 Inositol monophosphatase, conserved site LJF99_05220 IPR020583 Inositol monophosphatase, metal-binding site LJF99_05220 IPR000760 Inositol monophosphatase-like LJF99_05225 IPR004090 Chemotaxis methyl-accepting receptor LJF99_05225 IPR003660 HAMP domain LJF99_05225 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_05230 IPR003689 Zinc/iron permease LJF99_05240 IPR000845 Nucleoside phosphorylase domain LJF99_05240 IPR010049 MTA/SAH nucleosidase LJF99_05240 IPR035994 Nucleoside phosphorylase superfamily LJF99_05250 IPR002491 ABC transporter periplasmic binding domain LJF99_05250 IPR023544 ABC transporter, vitamin B12-binding protein LJF99_05270 IPR003713 Flagellar protein FliS LJF99_05270 IPR036584 Flagellar protein FliS superfamily LJF99_05275 IPR003481 Flagellar hook-associated protein 2, N-terminal LJF99_05275 IPR010809 Flagellar hook-associated protein 2, C-terminal LJF99_05275 IPR040026 Flagellar hook-associated protein 2 LJF99_05275 IPR010810 Flagellin hook, IN motif LJF99_05285 IPR001492 Flagellin LJF99_05285 IPR042187 Flagellin, C-terminal domain, subdomain 2 LJF99_05285 IPR001029 Flagellin, D0/D1 domain LJF99_05290 IPR010810 Flagellin hook, IN motif LJF99_05290 IPR042187 Flagellin, C-terminal domain, subdomain 2 LJF99_05290 IPR001029 Flagellin, D0/D1 domain LJF99_05290 IPR001492 Flagellin LJF99_05295 IPR005115 Uncharacterised domain UPF0126 LJF99_05305 IPR020536 Thil, AANH domain LJF99_05305 IPR001763 Rhodanese-like domain LJF99_05305 IPR026340 Thiazole biosynthesis domain LJF99_05305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_05305 IPR036873 Rhodanese-like domain superfamily LJF99_05305 IPR003720 tRNA sulfurtransferase ThiI LJF99_05305 IPR004114 THUMP domain LJF99_05475 IPR008711 Recombinase NinB LJF99_05475 IPR036619 NinB superfamily LJF99_05505 IPR001525 C-5 cytosine methyltransferase LJF99_05505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_05580 IPR010584 Exodeoxyribonuclease 8 LJF99_05580 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain LJF99_05615 IPR007476 Putative exonuclease, RdgC LJF99_05665 IPR013762 Integrase-like, catalytic domain superfamily LJF99_05665 IPR002104 Integrase, catalytic domain LJF99_05665 IPR010998 Integrase/recombinase, N-terminal LJF99_05665 IPR022000 Min27-like integrase, DNA-binding domain LJF99_05665 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_05675 IPR001460 Penicillin-binding protein, transpeptidase LJF99_05675 IPR009647 Penicillin-binding, C-terminal LJF99_05675 IPR011815 Penicillin-binding protein 1C LJF99_05675 IPR023346 Lysozyme-like domain superfamily LJF99_05675 IPR012338 Beta-lactamase/transpeptidase-like LJF99_05675 IPR036950 Penicillin binding protein transglycosylase domain LJF99_05675 IPR001264 Glycosyl transferase, family 51 LJF99_05680 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain LJF99_05680 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LJF99_05680 IPR001599 Alpha-2-macroglobulin LJF99_05680 IPR002890 Macroglobulin domain LJF99_05680 IPR021868 Alpha-2-macroglobulin MG3 domain LJF99_05680 IPR026284 Alpha-2-macroglobulin, bacteria LJF99_05680 IPR011625 Alpha-2-macroglobulin, bait region domain LJF99_05680 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain LJF99_05680 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain LJF99_05680 IPR011626 Alpha-macroglobulin-like, TED domain LJF99_05680 IPR040639 Alpha-2-macroglobulin, MG1 domain LJF99_05690 IPR029787 Nucleotide cyclase LJF99_05690 IPR000160 GGDEF domain LJF99_05690 IPR035919 EAL domain superfamily LJF99_05690 IPR001633 EAL domain LJF99_05690 IPR005330 MHYT domain LJF99_05695 IPR013785 Aldolase-type TIM barrel LJF99_05695 IPR007197 Radical SAM LJF99_05695 IPR034457 Organic radical-activating enzymes LJF99_05695 IPR001989 Radical-activating enzyme, conserved site LJF99_05695 IPR034465 Pyruvate formate-lyase activase LJF99_05695 IPR012838 Pyruvate formate-lyase 1 activating enzyme LJF99_05695 IPR012839 Organic radical enzyme activase LJF99_05710 IPR035906 MetI-like superfamily LJF99_05710 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_05710 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_05715 IPR035906 MetI-like superfamily LJF99_05715 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_05715 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_05715 IPR030199 Histidine transport system permease protein HisQ LJF99_05720 IPR018313 Solute-binding protein family 3, conserved site LJF99_05720 IPR001320 Ionotropic glutamate receptor LJF99_05720 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_05725 IPR017871 ABC transporter, conserved site LJF99_05725 IPR003593 AAA+ ATPase domain LJF99_05725 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LJF99_05725 IPR003439 ABC transporter-like LJF99_05725 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_05730 IPR005642 Lysine exporter LysO LJF99_05735 IPR007431 Acyl carrier protein phosphodiesterase LJF99_05735 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria LJF99_05745 IPR006659 Arsenate reductase LJF99_05745 IPR006660 Arsenate reductase-like LJF99_05745 IPR036249 Thioredoxin-like superfamily LJF99_05755 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_05755 IPR011716 Tetratricopeptide TPR-3 LJF99_05755 IPR030873 Beta-barrel assembly-enhancing protease LJF99_05755 IPR001915 Peptidase M48 LJF99_05760 IPR036868 TusA-like domain superfamily LJF99_05760 IPR001455 TusA-like domain LJF99_05760 IPR022931 Sulfur carrier protein TusA LJF99_05765 IPR002549 Transmembrane protein TqsA-like LJF99_05770 IPR023594 Haloalkane dehalogenase, subfamily 2 LJF99_05770 IPR000639 Epoxide hydrolase-like LJF99_05770 IPR000073 Alpha/beta hydrolase fold-1 LJF99_05770 IPR029058 Alpha/Beta hydrolase fold LJF99_05775 IPR016898 Polyphosphate kinase 2 LJF99_05775 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_05775 IPR022488 Polyphosphate kinase-2-related LJF99_05775 IPR022486 Polyphosphate kinase 2, PA0141 LJF99_05780 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_05780 IPR013611 Transport-associated OB, type 2 LJF99_05780 IPR008995 Molybdate/tungstate binding, C-terminal LJF99_05780 IPR015855 ABC transporter, maltose/maltodextrin import, MalK LJF99_05780 IPR017871 ABC transporter, conserved site LJF99_05780 IPR003439 ABC transporter-like LJF99_05780 IPR003593 AAA+ ATPase domain LJF99_05785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_05785 IPR035906 MetI-like superfamily LJF99_05790 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like LJF99_05790 IPR035906 MetI-like superfamily LJF99_05790 IPR035277 MalF, N-terminal LJF99_05790 IPR029345 Maltose transport system permease protein MalF, P2 domain LJF99_05790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_05795 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein LJF99_05795 IPR006059 Bacterial extracellular solute-binding protein LJF99_05795 IPR006061 Solute-binding family 1, conserved site LJF99_05800 IPR007358 Nucleoid-associated protein NdpA LJF99_05805 IPR009857 Uncharacterised protein family UPF0352 LJF99_05805 IPR023202 YejL-like superfamily LJF99_05810 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_05810 IPR024588 Inner membrane protein YejM, N-terminal LJF99_05810 IPR012159 Inner membrane protein YejM LJF99_05810 IPR000917 Sulfatase, N-terminal LJF99_05815 IPR010917 TonB-dependent receptor, conserved site LJF99_05815 IPR039426 Vitamin B12 transporter BtuB-like LJF99_05815 IPR012910 TonB-dependent receptor, plug domain LJF99_05815 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_05815 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_05815 IPR010916 TonB box, conserved site LJF99_05815 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_05820 IPR023302 Peptidase S9A, N-terminal domain LJF99_05820 IPR029058 Alpha/Beta hydrolase fold LJF99_05820 IPR002471 Peptidase S9, serine active site LJF99_05820 IPR002470 Peptidase S9A, prolyl oligopeptidase LJF99_05820 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain LJF99_05840 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria LJF99_05840 IPR005658 Proteinase inhibitor I11, ecotin LJF99_05840 IPR027438 Ecotin, C-terminal LJF99_05840 IPR036198 Ecotin superfamily LJF99_05845 IPR007335 Protein of unknown function DUF413 LJF99_05850 IPR036390 Winged helix DNA-binding domain superfamily LJF99_05850 IPR020890 Transcription regulator HTH, HdfR LJF99_05850 IPR000847 Transcription regulator HTH, LysR LJF99_05850 IPR005119 LysR, substrate-binding LJF99_05850 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_05855 IPR002701 Chorismate mutase II, prokaryotic-type LJF99_05855 IPR036291 NAD(P)-binding domain superfamily LJF99_05855 IPR003099 Prephenate dehydrogenase LJF99_05855 IPR036979 Chorismate mutase domain superfamily LJF99_05855 IPR011277 Chorismate mutase, T-protein LJF99_05855 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein LJF99_05855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_05855 IPR036263 Chorismate mutase type II superfamily LJF99_05860 IPR006219 DHAP synthase, class 1 LJF99_05860 IPR013785 Aldolase-type TIM barrel LJF99_05860 IPR006218 DAHP synthetase I/KDSA LJF99_05865 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LJF99_05865 IPR030395 Glycerophosphodiester phosphodiesterase domain LJF99_05870 IPR031656 Alpha-glycerophosphate oxidase, C-terminal LJF99_05870 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase LJF99_05870 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_05870 IPR006076 FAD dependent oxidoreductase LJF99_05870 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily LJF99_05880 IPR036390 Winged helix DNA-binding domain superfamily LJF99_05880 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LJF99_05880 IPR037171 NagB/RpiA transferase-like LJF99_05880 IPR001034 DeoR-type HTH domain LJF99_05880 IPR014036 DeoR C-terminal sensor domain LJF99_05880 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_05885 IPR005267 Glycerol-3-phosphate transporter LJF99_05885 IPR011701 Major facilitator superfamily LJF99_05885 IPR020846 Major facilitator superfamily domain LJF99_05885 IPR036259 MFS transporter superfamily LJF99_05885 IPR021159 Glycerate/sugar phosphate transporter, conserved site LJF99_05885 IPR000849 Sugar phosphate transporter LJF99_05890 IPR023271 Aquaporin-like LJF99_05890 IPR000425 Major intrinsic protein LJF99_05890 IPR022357 Major intrinsic protein, conserved site LJF99_05895 IPR000577 Carbohydrate kinase, FGGY LJF99_05895 IPR018485 Carbohydrate kinase, FGGY, C-terminal LJF99_05895 IPR018483 Carbohydrate kinase, FGGY, conserved site LJF99_05895 IPR018484 Carbohydrate kinase, FGGY, N-terminal LJF99_05895 IPR005999 Glycerol kinase LJF99_05900 IPR005119 LysR, substrate-binding LJF99_05900 IPR000847 Transcription regulator HTH, LysR LJF99_05900 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_05900 IPR036390 Winged helix DNA-binding domain superfamily LJF99_05930 IPR011008 Dimeric alpha-beta barrel LJF99_05930 IPR007138 Antibiotic biosynthesis monooxygenase domain LJF99_05935 IPR020471 Aldo/keto reductase LJF99_05935 IPR023210 NADP-dependent oxidoreductase domain LJF99_05935 IPR036812 NADP-dependent oxidoreductase domain superfamily LJF99_05935 IPR018170 Aldo/keto reductase, conserved site LJF99_05940 IPR011701 Major facilitator superfamily LJF99_05940 IPR020846 Major facilitator superfamily domain LJF99_05940 IPR036259 MFS transporter superfamily LJF99_05950 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LJF99_05955 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LJF99_05960 IPR004839 Aminotransferase, class I/classII LJF99_05960 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_05960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_05960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_05960 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_05960 IPR000524 Transcription regulator HTH, GntR LJF99_05960 IPR036390 Winged helix DNA-binding domain superfamily LJF99_05965 IPR029024 TerB-like LJF99_05965 IPR007486 Inner membrane protein YebE LJF99_05975 IPR019630 Protein of unknown function DUF2496, YbaM-related LJF99_05985 IPR036390 Winged helix DNA-binding domain superfamily LJF99_05985 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_05985 IPR005119 LysR, substrate-binding LJF99_05985 IPR000847 Transcription regulator HTH, LysR LJF99_05995 IPR004747 Cyanate transport system protein LJF99_05995 IPR011701 Major facilitator superfamily LJF99_05995 IPR020846 Major facilitator superfamily domain LJF99_05995 IPR036259 MFS transporter superfamily LJF99_06000 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LJF99_06000 IPR002942 RNA-binding S4 domain LJF99_06000 IPR036986 RNA-binding S4 domain superfamily LJF99_06000 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LJF99_06000 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LJF99_06000 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_06000 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_06005 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase LJF99_06005 IPR033524 Leu/Phe/Val dehydrogenases active site LJF99_06005 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal LJF99_06005 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain LJF99_06005 IPR014362 Glutamate dehydrogenase LJF99_06005 IPR036291 NAD(P)-binding domain superfamily LJF99_06005 IPR033922 NAD(P) binding domain of glutamate dehydrogenase LJF99_06015 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LJF99_06015 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LJF99_06015 IPR022858 Metallothiol transferase FosB LJF99_06015 IPR037523 Vicinal oxygen chelate (VOC) domain LJF99_06025 IPR006935 Helicase/UvrB, N-terminal LJF99_06025 IPR001650 Helicase, C-terminal LJF99_06025 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_06025 IPR011332 Zinc-binding ribosomal protein LJF99_06025 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_06030 IPR013078 Histidine phosphatase superfamily, clade-1 LJF99_06030 IPR029033 Histidine phosphatase superfamily LJF99_06030 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site LJF99_06030 IPR023086 Phosphoglycerate mutase, GpmB, probable LJF99_06045 IPR000183 Ornithine/DAP/Arg decarboxylase LJF99_06045 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LJF99_06045 IPR040634 Arginine decarboxylase, helical bundle domain LJF99_06045 IPR041128 Arginine decarboxylase, C-terminal helical LJF99_06045 IPR002985 Arginine decarboxylase LJF99_06045 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LJF99_06045 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LJF99_06045 IPR029066 PLP-binding barrel LJF99_06050 IPR011650 Peptidase M20, dimerisation domain LJF99_06050 IPR010161 Peptidase M20B, tripeptide aminopeptidase LJF99_06050 IPR036264 Bacterial exopeptidase dimerisation domain LJF99_06050 IPR002933 Peptidase M20 LJF99_06050 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LJF99_06075 IPR023480 Uncharacterised protein family UPF0312/YceI LJF99_06075 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily LJF99_06075 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LJF99_06080 IPR036390 Winged helix DNA-binding domain superfamily LJF99_06080 IPR000847 Transcription regulator HTH, LysR LJF99_06080 IPR005119 LysR, substrate-binding LJF99_06080 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_06090 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_06090 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site LJF99_06090 IPR000559 Formate-tetrahydrofolate ligase, FTHFS LJF99_06095 IPR033480 Single Cache domain 2 LJF99_06095 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_06095 IPR004090 Chemotaxis methyl-accepting receptor LJF99_06095 IPR003660 HAMP domain LJF99_06100 IPR020602 GTP cyclohydrolase I domain LJF99_06100 IPR001474 GTP cyclohydrolase I LJF99_06100 IPR018234 GTP cyclohydrolase I, conserved site LJF99_06105 IPR005111 MoeA, C-terminal, domain IV LJF99_06105 IPR036425 MoaB/Mog-like domain superfamily LJF99_06105 IPR036688 MoeA, C-terminal, domain IV superfamily LJF99_06105 IPR005110 MoeA, N-terminal and linker domain LJF99_06105 IPR001453 MoaB/Mog domain LJF99_06105 IPR008284 Molybdenum cofactor biosynthesis, conserved site LJF99_06105 IPR038987 Molybdopterin biosynthesis protein MoeA-like LJF99_06105 IPR036135 MoeA, N-terminal and linker domain superfamily LJF99_06110 IPR012730 Molybdopterin synthase sulfurylase MoeB LJF99_06110 IPR000594 THIF-type NAD/FAD binding fold LJF99_06110 IPR035985 Ubiquitin-activating enzyme LJF99_06115 IPR010438 Bor LJF99_06120 IPR010438 Bor LJF99_06130 IPR042051 ParM-like LJF99_06130 IPR009440 Plasmid segregation protein ParM/StbA LJF99_06135 IPR029058 Alpha/Beta hydrolase fold LJF99_06135 IPR000073 Alpha/beta hydrolase fold-1 LJF99_06135 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase LJF99_06140 IPR011868 Molybdate ABC transporter, ATP-binding protein LJF99_06140 IPR003593 AAA+ ATPase domain LJF99_06140 IPR003439 ABC transporter-like LJF99_06140 IPR017871 ABC transporter, conserved site LJF99_06140 IPR015852 ABC transporter, molybdenum import, ModC LJF99_06140 IPR005116 Transport-associated OB, type 1 LJF99_06140 IPR008995 Molybdate/tungstate binding, C-terminal LJF99_06140 IPR004606 Molybdenum-pterin binding LJF99_06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_06145 IPR035906 MetI-like superfamily LJF99_06145 IPR011867 Molybdate ABC transporter, permease protein LJF99_06145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_06150 IPR005950 Molybdate ABC transporter, substrate-binding protein LJF99_06155 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily LJF99_06155 IPR003448 Molybdopterin biosynthesis MoaE LJF99_06160 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LJF99_06160 IPR012675 Beta-grasp domain superfamily LJF99_06160 IPR003749 Sulfur carrier ThiS/MoaD-like LJF99_06165 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain LJF99_06165 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily LJF99_06165 IPR023045 Molybdenum cofactor biosynthesis C LJF99_06170 IPR008284 Molybdenum cofactor biosynthesis, conserved site LJF99_06170 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria LJF99_06170 IPR001453 MoaB/Mog domain LJF99_06170 IPR036425 MoaB/Mog-like domain superfamily LJF99_06170 IPR012245 Molybdenum cofactor biosynthesis protein MoaB LJF99_06175 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT LJF99_06175 IPR011031 Multihaem cytochrome LJF99_06175 IPR038266 NapC/NirT cytochrome c superfamily LJF99_06175 IPR005126 NapC/NirT cytochrome c, N-terminal LJF99_06175 IPR036280 Multiheme cytochrome superfamily LJF99_06175 IPR024717 Denitrification system component NapC/NirT/NrfH LJF99_06180 IPR005591 Nitrate reductase cytochrome c-type subunit NapB LJF99_06180 IPR036280 Multiheme cytochrome superfamily LJF99_06180 IPR011031 Multihaem cytochrome LJF99_06185 IPR011886 Ferredoxin-type protein, NapH/MauN family LJF99_06185 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_06185 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_06190 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LJF99_06190 IPR004494 MauM/NapG ferredoxin-type protein LJF99_06190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_06190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_06195 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain LJF99_06195 IPR006311 Twin-arginine translocation pathway, signal sequence LJF99_06195 IPR009010 Aspartate decarboxylase-like domain superfamily LJF99_06195 IPR006657 Molybdopterin dinucleotide-binding domain LJF99_06195 IPR006656 Molybdopterin oxidoreductase LJF99_06195 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LJF99_06195 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site LJF99_06195 IPR010051 Periplasmic nitrate reductase, large subunit LJF99_06195 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LJF99_06205 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_06205 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_06205 IPR004496 Ferredoxin-type protein NapF LJF99_06210 IPR013785 Aldolase-type TIM barrel LJF99_06210 IPR006638 Elp3/MiaB/NifB LJF99_06210 IPR007197 Radical SAM LJF99_06210 IPR010505 Molybdenum cofactor synthesis C-terminal LJF99_06210 IPR013483 Molybdenum cofactor biosynthesis protein A LJF99_06210 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site LJF99_06215 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing LJF99_06215 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_06215 IPR003660 HAMP domain LJF99_06215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_06215 IPR005467 Histidine kinase domain LJF99_06215 IPR029095 NarX-like, N-terminal LJF99_06215 IPR042295 NarX-like, N-terminal domain superfamily LJF99_06215 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LJF99_06220 IPR011006 CheY-like superfamily LJF99_06220 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_06220 IPR001789 Signal transduction response regulator, receiver domain LJF99_06220 IPR000792 Transcription regulator LuxR, C-terminal LJF99_06230 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_06230 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_06230 IPR030856 Sensor histidine kinase RcsC LJF99_06230 IPR005467 Histidine kinase domain LJF99_06230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_06230 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_06230 IPR011006 CheY-like superfamily LJF99_06230 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_06230 IPR038388 RcsC, C-terminal domain superfamily LJF99_06230 IPR001789 Signal transduction response regulator, receiver domain LJF99_06230 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal LJF99_06240 IPR038136 Gluconeogenesis factor superfamily LJF99_06240 IPR010119 Gluconeogenesis factor LJF99_06240 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 LJF99_06250 IPR026869 Putative glutamine amidotransferase type 2 LJF99_06250 IPR029055 Nucleophile aminohydrolases, N-terminal LJF99_06250 IPR017932 Glutamine amidotransferase type 2 domain LJF99_06255 IPR001347 Sugar isomerase (SIS) LJF99_06255 IPR035461 GmhA/DiaA LJF99_06255 IPR004515 Phosphoheptose isomerase LJF99_06260 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LJF99_06260 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LJF99_06260 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LJF99_06260 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LJF99_06260 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LJF99_06260 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LJF99_06260 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type LJF99_06265 IPR003607 HD/PDEase domain LJF99_06265 IPR011006 CheY-like superfamily LJF99_06265 IPR021800 Domain of unknown function DUF3369 LJF99_06265 IPR001789 Signal transduction response regulator, receiver domain LJF99_06265 IPR037522 HD-GYP domain LJF99_06275 IPR036397 Ribonuclease H superfamily LJF99_06275 IPR012337 Ribonuclease H-like superfamily LJF99_06275 IPR013520 Exonuclease, RNase T/DNA polymerase III LJF99_06275 IPR006309 DNA polymerase 3, epsilon subunit LJF99_06275 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain LJF99_06280 IPR012337 Ribonuclease H-like superfamily LJF99_06280 IPR036397 Ribonuclease H superfamily LJF99_06280 IPR022892 Ribonuclease HI LJF99_06280 IPR002156 Ribonuclease H domain LJF99_06285 IPR026669 Arsenite methyltransferase-like LJF99_06285 IPR013216 Methyltransferase type 11 LJF99_06285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_06290 IPR001279 Metallo-beta-lactamase LJF99_06290 IPR017782 Hydroxyacylglutathione hydrolase LJF99_06290 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LJF99_06290 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain LJF99_06290 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain LJF99_06295 IPR018392 LysM domain LJF99_06295 IPR036779 LysM domain superfamily LJF99_06295 IPR023346 Lysozyme-like domain superfamily LJF99_06295 IPR008258 Transglycosylase SLT domain 1 LJF99_06295 IPR000189 Prokaryotic transglycosylase, active site LJF99_06300 IPR022958 Uncharacterised protein family UPF0294 LJF99_06300 IPR005135 Endonuclease/exonuclease/phosphatase LJF99_06300 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LJF99_06305 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain LJF99_06305 IPR006683 Thioesterase domain LJF99_06305 IPR029069 HotDog domain superfamily LJF99_06305 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase LJF99_06315 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_06315 IPR028082 Periplasmic binding protein-like I LJF99_06315 IPR000843 LacI-type HTH domain LJF99_06320 IPR012289 Lytic transglycosylase, superhelical linker LJF99_06320 IPR008939 Lytic transglycosylase, superhelical U-shaped LJF99_06320 IPR008258 Transglycosylase SLT domain 1 LJF99_06320 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily LJF99_06320 IPR000189 Prokaryotic transglycosylase, active site LJF99_06320 IPR023346 Lysozyme-like domain superfamily LJF99_06325 IPR001633 EAL domain LJF99_06325 IPR029787 Nucleotide cyclase LJF99_06325 IPR035919 EAL domain superfamily LJF99_06325 IPR000160 GGDEF domain LJF99_06325 IPR005330 MHYT domain LJF99_06330 IPR036567 Ribosome hibernation promotion factor-like LJF99_06330 IPR003489 Ribosome hibernation promoting factor/RaiA LJF99_06345 IPR007452 Translocation and assembly module TamB LJF99_06350 IPR035243 TamA, POTRA domain 1 LJF99_06350 IPR039910 Surface antigen D15-like LJF99_06350 IPR010827 POTRA domain, BamA/TamA-like LJF99_06350 IPR000184 Bacterial surface antigen (D15) LJF99_06350 IPR034746 POTRA domain LJF99_06365 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LJF99_06365 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LJF99_06370 IPR002569 Peptide methionine sulphoxide reductase MsrA LJF99_06370 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily LJF99_06380 IPR003779 Carboxymuconolactone decarboxylase-like LJF99_06380 IPR029032 AhpD-like LJF99_06385 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LJF99_06385 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJF99_06385 IPR021179 Mercury(II) reductase LJF99_06385 IPR036163 Heavy metal-associated domain superfamily LJF99_06385 IPR006121 Heavy metal-associated domain, HMA LJF99_06385 IPR017969 Heavy-metal-associated, conserved site LJF99_06385 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LJF99_06385 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_06385 IPR023753 FAD/NAD(P)-binding domain LJF99_06385 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LJF99_06390 IPR027020 Protein ynjB LJF99_06390 IPR006059 Bacterial extracellular solute-binding protein LJF99_06395 IPR035906 MetI-like superfamily LJF99_06395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_06400 IPR003439 ABC transporter-like LJF99_06400 IPR003593 AAA+ ATPase domain LJF99_06400 IPR017871 ABC transporter, conserved site LJF99_06400 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_06405 IPR000462 CDP-alcohol phosphatidyltransferase LJF99_06410 IPR011757 Lytic transglycosylase MltB LJF99_06410 IPR031304 Transglycosylase SLT domain 2 LJF99_06410 IPR023346 Lysozyme-like domain superfamily LJF99_06415 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_06415 IPR000835 MarR-type HTH domain LJF99_06415 IPR011991 ArsR-like helix-turn-helix domain LJF99_06415 IPR036390 Winged helix DNA-binding domain superfamily LJF99_06425 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LJF99_06425 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LJF99_06425 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LJF99_06425 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LJF99_06425 IPR005852 Phosphoglucomutase, alpha-D-glucose specific LJF99_06425 IPR005843 Alpha-D-phosphohexomutase, C-terminal LJF99_06425 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LJF99_06425 IPR016066 Alpha-D-phosphohexomutase, conserved site LJF99_06430 IPR013321 Arc-type ribbon-helix-helix LJF99_06430 IPR010985 Ribbon-helix-helix LJF99_06430 IPR005621 Negative modulator of initiation of replication SeqA LJF99_06430 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain LJF99_06430 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily LJF99_06430 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal LJF99_06435 IPR029058 Alpha/Beta hydrolase fold LJF99_06435 IPR000073 Alpha/beta hydrolase fold-1 LJF99_06445 IPR002145 Ribbon-helix-helix protein, CopG LJF99_06445 IPR010985 Ribbon-helix-helix LJF99_06450 IPR029039 Flavoprotein-like superfamily LJF99_06450 IPR008254 Flavodoxin/nitric oxide synthase LJF99_06450 IPR001226 Flavodoxin, conserved site LJF99_06450 IPR010086 Flavodoxin, long chain LJF99_06460 IPR036390 Winged helix DNA-binding domain superfamily LJF99_06460 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_06460 IPR002481 Ferric-uptake regulator LJF99_06465 IPR004514 Glutamine-tRNA synthetase LJF99_06465 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_06465 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LJF99_06465 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain LJF99_06465 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily LJF99_06465 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal LJF99_06465 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily LJF99_06465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_06465 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LJF99_06465 IPR022861 Glutamine-tRNA ligase, bacterial LJF99_06470 IPR025705 Beta-hexosaminidase LJF99_06470 IPR014756 Immunoglobulin E-set LJF99_06470 IPR013783 Immunoglobulin-like fold LJF99_06470 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal LJF99_06470 IPR029018 Beta-hexosaminidase-like, domain 2 LJF99_06470 IPR015883 Glycoside hydrolase family 20, catalytic domain LJF99_06470 IPR004867 Chitobiase C-terminal domain LJF99_06470 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain LJF99_06470 IPR012291 CBM2, carbohydrate-binding domain superfamily LJF99_06470 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily LJF99_06470 IPR017853 Glycoside hydrolase superfamily LJF99_06475 IPR001996 Phosphotransferase system, IIB component, type 1 LJF99_06475 IPR013013 Phosphotransferase system, EIIC component, type 1 LJF99_06475 IPR003352 Phosphotransferase system, EIIC LJF99_06475 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LJF99_06475 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LJF99_06475 IPR036878 Glucose permease domain IIB LJF99_06475 IPR011055 Duplicated hybrid motif LJF99_06475 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component LJF99_06480 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase LJF99_06480 IPR004547 Glucosamine-6-phosphate isomerase LJF99_06480 IPR018321 Glucosamine-6-phosphate isomerase, conserved site LJF99_06480 IPR037171 NagB/RpiA transferase-like LJF99_06485 IPR032466 Metal-dependent hydrolase LJF99_06485 IPR011059 Metal-dependent hydrolase, composite domain superfamily LJF99_06485 IPR003764 N-acetylglucosamine-6-phosphate deacetylase LJF99_06485 IPR006680 Amidohydrolase-related LJF99_06490 IPR036390 Winged helix DNA-binding domain superfamily LJF99_06490 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_06490 IPR000600 ROK family LJF99_06490 IPR000835 MarR-type HTH domain LJF99_06510 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain LJF99_06510 IPR037143 4'-phosphopantetheinyl transferase domain superfamily LJF99_06510 IPR008278 4'-phosphopantetheinyl transferase domain LJF99_06510 IPR003542 Enterobactin synthetase-like, component D LJF99_06520 IPR001296 Glycosyl transferase, family 1 LJF99_06520 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LJF99_06520 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL LJF99_06535 IPR042104 Polyketide synthase, dehydratase domain superfamily LJF99_06535 IPR011032 GroES-like superfamily LJF99_06535 IPR018201 Beta-ketoacyl synthase, active site LJF99_06535 IPR014031 Beta-ketoacyl synthase, C-terminal LJF99_06535 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LJF99_06535 IPR036291 NAD(P)-binding domain superfamily LJF99_06535 IPR032821 Ketoacyl-synthetase, C-terminal extension LJF99_06535 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LJF99_06535 IPR020807 Polyketide synthase, dehydratase domain LJF99_06535 IPR020843 Polyketide synthase, enoylreductase domain LJF99_06535 IPR013968 Polyketide synthase, ketoreductase domain LJF99_06535 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LJF99_06535 IPR036299 Polyketide synthase, docking domain superfmaily LJF99_06535 IPR009081 Phosphopantetheine binding ACP domain LJF99_06535 IPR006162 Phosphopantetheine attachment site LJF99_06535 IPR016039 Thiolase-like LJF99_06535 IPR013154 Alcohol dehydrogenase, N-terminal LJF99_06535 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LJF99_06535 IPR014030 Beta-ketoacyl synthase, N-terminal LJF99_06535 IPR036736 ACP-like superfamily LJF99_06535 IPR001227 Acyl transferase domain superfamily LJF99_06535 IPR014043 Acyl transferase LJF99_06545 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LJF99_06545 IPR014030 Beta-ketoacyl synthase, N-terminal LJF99_06545 IPR014031 Beta-ketoacyl synthase, C-terminal LJF99_06545 IPR018201 Beta-ketoacyl synthase, active site LJF99_06545 IPR001242 Condensation domain LJF99_06545 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_06545 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LJF99_06545 IPR014043 Acyl transferase LJF99_06545 IPR036736 ACP-like superfamily LJF99_06545 IPR001227 Acyl transferase domain superfamily LJF99_06545 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LJF99_06545 IPR009081 Phosphopantetheine binding ACP domain LJF99_06545 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LJF99_06545 IPR016039 Thiolase-like LJF99_06545 IPR032821 Ketoacyl-synthetase, C-terminal extension LJF99_06560 IPR002611 IstB-like ATP-binding protein LJF99_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_06560 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_06560 IPR003593 AAA+ ATPase domain LJF99_06565 IPR036397 Ribonuclease H superfamily LJF99_06565 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_06565 IPR012337 Ribonuclease H-like superfamily LJF99_06565 IPR001584 Integrase, catalytic core LJF99_06575 IPR042099 AMP-dependent synthetase-like superfamily LJF99_06575 IPR020845 AMP-binding, conserved site LJF99_06575 IPR001242 Condensation domain LJF99_06575 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_06575 IPR000873 AMP-dependent synthetase/ligase LJF99_06575 IPR009081 Phosphopantetheine binding ACP domain LJF99_06575 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_06575 IPR001031 Thioesterase LJF99_06575 IPR036736 ACP-like superfamily LJF99_06575 IPR029058 Alpha/Beta hydrolase fold LJF99_06575 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LJF99_06575 IPR020802 Polyketide synthase, thioesterase domain LJF99_06575 IPR010071 Amino acid adenylation domain LJF99_06585 IPR014756 Immunoglobulin E-set LJF99_06585 IPR013783 Immunoglobulin-like fold LJF99_06585 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal LJF99_06585 IPR004867 Chitobiase C-terminal domain LJF99_06585 IPR017853 Glycoside hydrolase superfamily LJF99_06585 IPR015883 Glycoside hydrolase family 20, catalytic domain LJF99_06585 IPR029018 Beta-hexosaminidase-like, domain 2 LJF99_06585 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain LJF99_06585 IPR012291 CBM2, carbohydrate-binding domain superfamily LJF99_06585 IPR025705 Beta-hexosaminidase LJF99_06585 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily LJF99_06590 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_06590 IPR012549 Phosphoethanolamine transferase, N-terminal LJF99_06590 IPR040423 Phosphoethanolamine transferase LJF99_06590 IPR000917 Sulfatase, N-terminal LJF99_06595 IPR029072 YebC-like LJF99_06595 IPR002876 Transcriptional regulator TACO1-like LJF99_06595 IPR017856 Integrase-like, N-terminal LJF99_06595 IPR026564 Transcriptional regulator TACO1-like, domain 3 LJF99_06600 IPR012340 Nucleic acid-binding, OB-fold LJF99_06600 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LJF99_06600 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_06600 IPR004524 Aspartate-tRNA ligase, type 1 LJF99_06600 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb LJF99_06600 IPR004115 GAD-like domain superfamily LJF99_06600 IPR029351 GAD domain LJF99_06600 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LJF99_06610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_06610 IPR005271 Carboxy-S-adenosyl-L-methionine synthase LJF99_06610 IPR041698 Methyltransferase domain 25 LJF99_06615 IPR010017 tRNA U34 carboxymethyltransferase LJF99_06615 IPR027555 tRNA (mo5U34)-methyltransferase-like LJF99_06615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_06635 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LJF99_06635 IPR024706 Peroxiredoxin, AhpC-type LJF99_06635 IPR019479 Peroxiredoxin, C-terminal LJF99_06635 IPR036249 Thioredoxin-like superfamily LJF99_06635 IPR013766 Thioredoxin domain LJF99_06640 IPR025959 Winged helix-turn helix domain LJF99_06640 IPR038717 Tc1-like transposase, DDE domain LJF99_06640 IPR012337 Ribonuclease H-like superfamily LJF99_06640 IPR009057 Homeobox-like domain superfamily LJF99_06645 IPR000847 Transcription regulator HTH, LysR LJF99_06645 IPR005119 LysR, substrate-binding LJF99_06645 IPR036390 Winged helix DNA-binding domain superfamily LJF99_06645 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_06650 IPR016183 Leukocidin/Hemolysin toxin LJF99_06650 IPR036435 Leukocidin/porin MspA superfamily LJF99_06650 IPR035992 Ricin B-like lectins LJF99_06650 IPR000772 Ricin B, lectin domain LJF99_06650 IPR022220 Hemolytic toxin, N-terminal LJF99_06655 IPR038765 Papain-like cysteine peptidase superfamily LJF99_06655 IPR000064 Endopeptidase, NLPC/P60 domain LJF99_06665 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_06665 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LJF99_06665 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_06665 IPR015590 Aldehyde dehydrogenase domain LJF99_06665 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent LJF99_06665 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_06670 IPR009057 Homeobox-like domain superfamily LJF99_06670 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LJF99_06670 IPR001647 DNA-binding HTH domain, TetR-type LJF99_06670 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal LJF99_06680 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LJF99_06680 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LJF99_06680 IPR039697 Iron-type alcohol dehydrogenase-like LJF99_06690 IPR005856 Cysteine synthase LJF99_06690 IPR005858 Cysteine synthase CysM LJF99_06690 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LJF99_06690 IPR001926 Pyridoxal-phosphate dependent enzyme LJF99_06690 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LJF99_06705 IPR036513 STAS domain superfamily LJF99_06705 IPR002645 STAS domain LJF99_06705 IPR001902 SLC26A/SulP transporter LJF99_06705 IPR011547 SLC26A/SulP transporter domain LJF99_06710 IPR002528 Multi antimicrobial extrusion protein LJF99_06720 IPR007420 Protein of unknown function DUF465 LJF99_06720 IPR038444 DUF465 superfamily LJF99_06735 IPR011037 Pyruvate kinase-like, insert domain superfamily LJF99_06735 IPR005303 MOSC, N-terminal beta barrel LJF99_06735 IPR005302 Molybdenum cofactor sulfurase, C-terminal LJF99_06735 IPR012675 Beta-grasp domain superfamily LJF99_06735 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LJF99_06735 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_06735 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LJF99_06735 IPR011037 Pyruvate kinase-like, insert domain superfamily LJF99_06735 IPR005303 MOSC, N-terminal beta barrel LJF99_06735 IPR005302 Molybdenum cofactor sulfurase, C-terminal LJF99_06735 IPR012675 Beta-grasp domain superfamily LJF99_06735 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_06735 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_06735 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_06740 IPR001610 PAC motif LJF99_06740 IPR004090 Chemotaxis methyl-accepting receptor LJF99_06740 IPR000700 PAS-associated, C-terminal LJF99_06740 IPR000014 PAS domain LJF99_06740 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_06740 IPR013655 PAS fold-3 LJF99_06740 IPR035965 PAS domain superfamily LJF99_06745 IPR022919 Peptidase M48, protease HtpX, putative LJF99_06745 IPR001915 Peptidase M48 LJF99_06750 IPR004472 Dethiobiotin synthase BioD LJF99_06750 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_06755 IPR029058 Alpha/Beta hydrolase fold LJF99_06755 IPR000073 Alpha/beta hydrolase fold-1 LJF99_06755 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LJF99_06755 IPR013216 Methyltransferase type 11 LJF99_06755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_06760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_06760 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_06760 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria LJF99_06760 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type LJF99_06760 IPR004839 Aminotransferase, class I/classII LJF99_06760 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LJF99_06760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_06765 IPR013785 Aldolase-type TIM barrel LJF99_06765 IPR010722 Biotin and thiamin synthesis-associated domain LJF99_06765 IPR024177 Biotin synthase LJF99_06765 IPR006638 Elp3/MiaB/NifB LJF99_06765 IPR007197 Radical SAM LJF99_06765 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB LJF99_06770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_06770 IPR005814 Aminotransferase class-III LJF99_06770 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA LJF99_06770 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_06770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_06785 IPR012340 Nucleic acid-binding, OB-fold LJF99_06785 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_06785 IPR004522 Asparagine-tRNA ligase LJF99_06785 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb LJF99_06785 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LJF99_06785 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LJF99_06790 IPR004668 Anaerobic c4-dicarboxylate membrane transporter LJF99_06805 IPR036390 Winged helix DNA-binding domain superfamily LJF99_06805 IPR000847 Transcription regulator HTH, LysR LJF99_06805 IPR005119 LysR, substrate-binding LJF99_06805 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_06810 IPR036249 Thioredoxin-like superfamily LJF99_06810 IPR006660 Arsenate reductase-like LJF99_06810 IPR006504 Transcriptional regulator Spx/MgsR LJF99_06815 IPR011650 Peptidase M20, dimerisation domain LJF99_06815 IPR002933 Peptidase M20 LJF99_06815 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria LJF99_06815 IPR036264 Bacterial exopeptidase dimerisation domain LJF99_06815 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LJF99_06820 IPR003709 Peptidase M15B LJF99_06820 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LJF99_06830 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_06830 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_06830 IPR038770 Sodium/solute symporter superfamily LJF99_06830 IPR023729 K(+)/H(+) antiporter NhaP2 LJF99_06830 IPR006037 Regulator of K+ conductance, C-terminal LJF99_06830 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_06830 IPR005170 Transporter-associated domain LJF99_06830 IPR006153 Cation/H+ exchanger LJF99_06830 IPR030151 K(+)/H(+) antiporter NhaP LJF99_06840 IPR023729 K(+)/H(+) antiporter NhaP2 LJF99_06840 IPR006153 Cation/H+ exchanger LJF99_06840 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_06840 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_06840 IPR038770 Sodium/solute symporter superfamily LJF99_06840 IPR030151 K(+)/H(+) antiporter NhaP LJF99_06840 IPR006037 Regulator of K+ conductance, C-terminal LJF99_06840 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_06840 IPR005170 Transporter-associated domain LJF99_06850 IPR001123 Amino acid exporter protein, LeuE-type LJF99_06855 IPR000727 Target SNARE coiled-coil homology domain LJF99_06855 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_06855 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LJF99_06855 IPR003660 HAMP domain LJF99_06855 IPR004090 Chemotaxis methyl-accepting receptor LJF99_06860 IPR011088 Bacteriophage phiNM3, A0EWY4 LJF99_06875 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site LJF99_06875 IPR036452 Ribonucleoside hydrolase-like LJF99_06875 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LJF99_06875 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA LJF99_06875 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LJF99_06880 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_06880 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LJF99_06880 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_06885 IPR018016 Nucleoside phosphorylase, conserved site LJF99_06885 IPR000845 Nucleoside phosphorylase domain LJF99_06885 IPR035994 Nucleoside phosphorylase superfamily LJF99_06885 IPR010058 Uridine phosphorylase LJF99_06890 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LJF99_06890 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LJF99_06890 IPR039697 Iron-type alcohol dehydrogenase-like LJF99_06925 IPR022399 Helicase/secretion neighbourhood ATPase LJF99_06925 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_06925 IPR001482 Type II/IV secretion system protein LJF99_06930 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_06930 IPR025501 ATP binding protein MinD LJF99_06930 IPR010223 ATP binding protein MinD, bacterial-type LJF99_06930 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LJF99_06940 IPR007055 BON domain LJF99_06940 IPR001775 GspD/PilQ family LJF99_06940 IPR032789 Pilus formation protein, N-terminal LJF99_06940 IPR004846 Type II/III secretion system LJF99_06940 IPR014004 Transport-associated and nodulation domain, bacteria LJF99_06975 IPR026592 Outer membrane protein assembly factor BamE LJF99_06975 IPR037873 BamE-like LJF99_06975 IPR007450 Lipoprotein SmpA/OmlA LJF99_06980 IPR016040 NAD(P)-binding domain LJF99_06980 IPR036291 NAD(P)-binding domain superfamily LJF99_06980 IPR000534 Semialdehyde dehydrogenase, NAD-binding LJF99_06985 IPR037021 RnfH superfamily LJF99_06985 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LJF99_06985 IPR005346 RnfH protein LJF99_06990 IPR005031 Coenzyme Q-binding protein COQ10, START domain LJF99_06990 IPR023393 START-like domain superfamily LJF99_06995 IPR023620 Small protein B LJF99_06995 IPR000037 SsrA-binding protein LJF99_06995 IPR020081 SsrA-binding protein, conserved site LJF99_07070 IPR011781 D-serine deaminase transcriptional activator LJF99_07070 IPR005119 LysR, substrate-binding LJF99_07070 IPR000847 Transcription regulator HTH, LysR LJF99_07070 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_07070 IPR036390 Winged helix DNA-binding domain superfamily LJF99_07075 IPR003474 Gluconate transporter LJF99_07080 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LJF99_07080 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LJF99_07080 IPR001926 Pyridoxal-phosphate dependent enzyme LJF99_07080 IPR011780 D-serine ammonia-lyase LJF99_07090 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LJF99_07090 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic LJF99_07090 IPR024084 Isopropylmalate dehydrogenase-like domain LJF99_07095 IPR020449 Transcription regulator HTH, AraC- type LJF99_07095 IPR009057 Homeobox-like domain superfamily LJF99_07095 IPR018060 DNA binding HTH domain, AraC-type LJF99_07095 IPR018062 HTH domain AraC-type, conserved site LJF99_07100 IPR016305 Mannose-6-phosphate isomerase LJF99_07100 IPR014710 RmlC-like jelly roll fold LJF99_07100 IPR001250 Mannose-6-phosphate isomerase, type I LJF99_07100 IPR011051 RmlC-like cupin domain superfamily LJF99_07100 IPR018050 Phosphomannose isomerase, type I, conserved site LJF99_07125 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_07125 IPR027619 Putative C-S lyase LJF99_07125 IPR004839 Aminotransferase, class I/classII LJF99_07125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_07125 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_07130 IPR036878 Glucose permease domain IIB LJF99_07130 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LJF99_07130 IPR003352 Phosphotransferase system, EIIC LJF99_07130 IPR013013 Phosphotransferase system, EIIC component, type 1 LJF99_07130 IPR001996 Phosphotransferase system, IIB component, type 1 LJF99_07130 IPR011301 PTS system, maltose/glucose-specific IIBC component LJF99_07130 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LJF99_07135 IPR001761 Periplasmic binding protein/LacI sugar binding domain LJF99_07135 IPR028082 Periplasmic binding protein-like I LJF99_07135 IPR000843 LacI-type HTH domain LJF99_07135 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_07150 IPR029058 Alpha/Beta hydrolase fold LJF99_07150 IPR000073 Alpha/beta hydrolase fold-1 LJF99_07155 IPR011701 Major facilitator superfamily LJF99_07155 IPR020846 Major facilitator superfamily domain LJF99_07155 IPR036259 MFS transporter superfamily LJF99_07160 IPR030470 UbiA prenyltransferase conserved site LJF99_07160 IPR000537 UbiA prenyltransferase family LJF99_07160 IPR006369 Protohaem IX farnesyltransferase LJF99_07165 IPR014210 Cytochrome o ubiquinol oxidase subunit IV LJF99_07165 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes LJF99_07170 IPR014206 Cytochrome o ubiquinol oxidase, subunit III LJF99_07170 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle LJF99_07170 IPR035973 Cytochrome c oxidase subunit III-like superfamily LJF99_07170 IPR033946 Ubiquinol oxidase subunit III domain LJF99_07170 IPR000298 Cytochrome c oxidase subunit III-like LJF99_07170 IPR024791 Cytochrome c oxidase subunit III LJF99_07175 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site LJF99_07175 IPR023616 Cytochrome c oxidase-like, subunit I domain LJF99_07175 IPR036927 Cytochrome c oxidase-like, subunit I superfamily LJF99_07175 IPR000883 Cytochrome c oxidase subunit I LJF99_07175 IPR014207 Cytochrome o ubiquinol oxidase, subunit I LJF99_07180 IPR006333 Cytochrome o ubiquinol oxidase subunit II LJF99_07180 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily LJF99_07180 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain LJF99_07180 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain LJF99_07180 IPR010514 COX aromatic rich motif LJF99_07180 IPR002429 Cytochrome c oxidase subunit II-like C-terminal LJF99_07180 IPR008972 Cupredoxin LJF99_07190 IPR008168 Cytochrome c, class IC LJF99_07190 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit LJF99_07190 IPR009056 Cytochrome c-like domain LJF99_07190 IPR036909 Cytochrome c-like domain superfamily LJF99_07200 IPR036452 Ribonucleoside hydrolase-like LJF99_07200 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site LJF99_07200 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LJF99_07200 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LJF99_07200 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB LJF99_07215 IPR008972 Cupredoxin LJF99_07215 IPR000923 Blue (type 1) copper domain LJF99_07215 IPR028871 Blue (type 1) copper protein, binding site LJF99_07215 IPR014068 Azurin LJF99_07220 IPR042159 Flavin-trafficking protein ApbE LJF99_07220 IPR003374 ApbE-like superfamily LJF99_07220 IPR024932 Flavin transferase ApbE LJF99_07235 IPR020847 AP endonuclease 1, binding site LJF99_07235 IPR004808 AP endonuclease 1 LJF99_07235 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LJF99_07235 IPR020848 AP endonuclease 1, conserved site LJF99_07235 IPR005135 Endonuclease/exonuclease/phosphatase LJF99_07235 IPR037493 Exodeoxyribonuclease III-like LJF99_07240 IPR006143 RND efflux pump, membrane fusion protein LJF99_07240 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_07245 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LJF99_07245 IPR001036 Acriflavin resistance protein LJF99_07245 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LJF99_07260 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_07260 IPR006143 RND efflux pump, membrane fusion protein LJF99_07265 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA LJF99_07265 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LJF99_07265 IPR001036 Acriflavin resistance protein LJF99_07275 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LJF99_07275 IPR023741 Lipoate-protein ligase A LJF99_07275 IPR004562 Lipoyltransferase/lipoate-protein ligase LJF99_07275 IPR019491 Lipoate protein ligase, C-terminal LJF99_07280 IPR005330 MHYT domain LJF99_07280 IPR000160 GGDEF domain LJF99_07280 IPR001633 EAL domain LJF99_07280 IPR035919 EAL domain superfamily LJF99_07280 IPR029787 Nucleotide cyclase LJF99_07285 IPR001036 Acriflavin resistance protein LJF99_07285 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LJF99_07285 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LJF99_07300 IPR007272 Sulphur transport domain LJF99_07305 IPR001845 HTH ArsR-type DNA-binding domain LJF99_07305 IPR036390 Winged helix DNA-binding domain superfamily LJF99_07305 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_07305 IPR011991 ArsR-like helix-turn-helix domain LJF99_07320 IPR003416 MgtC/SapB/SrpB/YhiD family LJF99_07325 IPR012781 D-fructose-responsive transcription factor LJF99_07325 IPR000843 LacI-type HTH domain LJF99_07325 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_07325 IPR028082 Periplasmic binding protein-like I LJF99_07325 IPR025997 Periplasmic binding protein LJF99_07335 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LJF99_07335 IPR010973 Phosphotransferase system, sucrose-specific IIBC component LJF99_07335 IPR001996 Phosphotransferase system, IIB component, type 1 LJF99_07335 IPR003352 Phosphotransferase system, EIIC LJF99_07335 IPR013013 Phosphotransferase system, EIIC component, type 1 LJF99_07335 IPR036878 Glucose permease domain IIB LJF99_07335 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LJF99_07340 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LJF99_07340 IPR011611 Carbohydrate kinase PfkB LJF99_07340 IPR002139 Ribokinase/fructokinase LJF99_07340 IPR029056 Ribokinase-like LJF99_07345 IPR021570 LamB-type porin N-terminal domain LJF99_07345 IPR003192 Porin, LamB-type LJF99_07345 IPR036998 Porin, LamB-type superfamily LJF99_07350 IPR008971 HSP40/DnaJ peptide-binding LJF99_07350 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily LJF99_07350 IPR036869 Chaperone J-domain superfamily LJF99_07350 IPR001305 Heat shock protein DnaJ, cysteine-rich domain LJF99_07350 IPR018253 DnaJ domain, conserved site LJF99_07350 IPR012724 Chaperone DnaJ LJF99_07350 IPR002939 Chaperone DnaJ, C-terminal LJF99_07350 IPR001623 DnaJ domain LJF99_07355 IPR013126 Heat shock protein 70 family LJF99_07355 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily LJF99_07355 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily LJF99_07355 IPR018181 Heat shock protein 70, conserved site LJF99_07355 IPR012725 Chaperone DnaK LJF99_07360 IPR013805 GrpE nucleotide exchange factor, coiled-coil LJF99_07360 IPR009012 GrpE nucleotide exchange factor, head LJF99_07360 IPR000740 GrpE nucleotide exchange factor LJF99_07365 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal LJF99_07365 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal LJF99_07365 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily LJF99_07365 IPR002504 NAD kinase LJF99_07370 IPR003395 RecF/RecN/SMC, N-terminal LJF99_07370 IPR004604 DNA recombination/repair protein RecN LJF99_07370 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07375 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable LJF99_07375 IPR038222 DHHA2 domain superfamily LJF99_07375 IPR004097 DHHA2 domain LJF99_07375 IPR038763 DHH phosphoesterase superfamily LJF99_07375 IPR001667 DDH domain LJF99_07385 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_07385 IPR030190 Macrolide export protein MacA LJF99_07385 IPR006143 RND efflux pump, membrane fusion protein LJF99_07390 IPR025857 MacB-like periplasmic core domain LJF99_07390 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07390 IPR017911 ABC transporter, macrolide export, ATP-binding domain LJF99_07390 IPR003439 ABC transporter-like LJF99_07390 IPR017871 ABC transporter, conserved site LJF99_07390 IPR003593 AAA+ ATPase domain LJF99_07390 IPR003838 ABC transporter permease protein domain LJF99_07395 IPR003423 Outer membrane efflux protein LJF99_07395 IPR010131 RND efflux system, outer membrane lipoprotein, NodT LJF99_07400 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LJF99_07400 IPR007037 Siderophore-interacting protein, C-terminal domain LJF99_07400 IPR039374 Siderophore-interacting protein LJF99_07400 IPR013113 FAD-binding 9, siderophore-interacting LJF99_07400 IPR017927 FAD-binding domain, ferredoxin reductase-type LJF99_07400 IPR017938 Riboflavin synthase-like beta-barrel LJF99_07405 IPR006219 DHAP synthase, class 1 LJF99_07405 IPR013785 Aldolase-type TIM barrel LJF99_07405 IPR006218 DAHP synthetase I/KDSA LJF99_07410 IPR001207 Transposase, mutator type LJF99_07415 IPR027444 Histone-like protein H-NS, C-terminal domain LJF99_07415 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LJF99_07415 IPR001801 Histone-like protein H-NS LJF99_07415 IPR027454 Histone-like protein H-NS, N-terminal LJF99_07440 IPR018060 DNA binding HTH domain, AraC-type LJF99_07440 IPR018062 HTH domain AraC-type, conserved site LJF99_07440 IPR014710 RmlC-like jelly roll fold LJF99_07440 IPR011051 RmlC-like cupin domain superfamily LJF99_07440 IPR020449 Transcription regulator HTH, AraC- type LJF99_07440 IPR013096 Cupin 2, conserved barrel LJF99_07440 IPR009057 Homeobox-like domain superfamily LJF99_07450 IPR006076 FAD dependent oxidoreductase LJF99_07450 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_07455 IPR011051 RmlC-like cupin domain superfamily LJF99_07455 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_07455 IPR001387 Cro/C1-type helix-turn-helix domain LJF99_07455 IPR014710 RmlC-like jelly roll fold LJF99_07455 IPR013096 Cupin 2, conserved barrel LJF99_07460 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_07460 IPR016160 Aldehyde dehydrogenase, cysteine active site LJF99_07460 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LJF99_07460 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_07460 IPR015590 Aldehyde dehydrogenase domain LJF99_07460 IPR010102 Succinate semialdehyde dehydrogenase LJF99_07460 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_07465 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_07465 IPR004632 4-aminobutyrate aminotransferase, bacterial LJF99_07465 IPR005814 Aminotransferase class-III LJF99_07465 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_07465 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_07470 IPR004841 Amino acid permease/ SLC12A domain LJF99_07475 IPR004841 Amino acid permease/ SLC12A domain LJF99_07480 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein LJF99_07480 IPR003841 Sodium-dependent phosphate transport protein LJF99_07485 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal LJF99_07485 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LJF99_07485 IPR008104 Macrophage infectivity potentiator LJF99_07485 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily LJF99_07490 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type LJF99_07490 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B LJF99_07505 IPR000845 Nucleoside phosphorylase domain LJF99_07505 IPR035994 Nucleoside phosphorylase superfamily LJF99_07505 IPR004402 Purine nucleoside phosphorylase DeoD-type LJF99_07525 IPR002686 Transposase IS200-like LJF99_07525 IPR036515 Transposase IS200-like superfamily LJF99_07535 IPR009057 Homeobox-like domain superfamily LJF99_07535 IPR025959 Winged helix-turn helix domain LJF99_07535 IPR038717 Tc1-like transposase, DDE domain LJF99_07535 IPR012337 Ribonuclease H-like superfamily LJF99_07550 IPR012337 Ribonuclease H-like superfamily LJF99_07550 IPR025959 Winged helix-turn helix domain LJF99_07550 IPR038717 Tc1-like transposase, DDE domain LJF99_07550 IPR009057 Homeobox-like domain superfamily LJF99_07555 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LJF99_07555 IPR029144 Threonine synthase, N-terminal LJF99_07555 IPR037158 Threonine synthase, N-terminal domain superfamily LJF99_07555 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LJF99_07555 IPR001926 Pyridoxal-phosphate dependent enzyme LJF99_07555 IPR004450 Threonine synthase-like LJF99_07560 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_07560 IPR013750 GHMP kinase, C-terminal domain LJF99_07560 IPR036554 GHMP kinase, C-terminal domain superfamily LJF99_07560 IPR006204 GHMP kinase N-terminal domain LJF99_07560 IPR006203 GHMP kinase, ATP-binding, conserved site LJF99_07560 IPR000870 Homoserine kinase LJF99_07560 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_07565 IPR002912 ACT domain LJF99_07565 IPR036393 Acetylglutamate kinase-like superfamily LJF99_07565 IPR036291 NAD(P)-binding domain superfamily LJF99_07565 IPR019811 Homoserine dehydrogenase, conserved site LJF99_07565 IPR001342 Homoserine dehydrogenase, catalytic LJF99_07565 IPR027795 CASTOR, ACT domain LJF99_07565 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain LJF99_07565 IPR018042 Aspartate kinase, conserved site LJF99_07565 IPR001341 Aspartate kinase LJF99_07565 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding LJF99_07565 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I LJF99_07565 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_07570 IPR029028 Alpha/beta knot methyltransferases LJF99_07570 IPR004384 RNA methyltransferase TrmJ/LasT LJF99_07570 IPR001537 tRNA/rRNA methyltransferase, SpoU type LJF99_07570 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LJF99_07575 IPR010452 Isocitrate dehydrogenase kinasephosphatase LJF99_07590 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LJF99_07590 IPR010203 Regulator of ribonuclease activity A LJF99_07590 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily LJF99_07600 IPR011006 CheY-like superfamily LJF99_07600 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_07600 IPR001789 Signal transduction response regulator, receiver domain LJF99_07600 IPR039420 Transcriptional regulatory protein WalR-like LJF99_07600 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_07600 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_07615 IPR003593 AAA+ ATPase domain LJF99_07615 IPR011527 ABC transporter type 1, transmembrane domain LJF99_07615 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_07615 IPR003439 ABC transporter-like LJF99_07615 IPR017871 ABC transporter, conserved site LJF99_07615 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD LJF99_07615 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07615 IPR039421 Type I protein exporter LJF99_07620 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07620 IPR011527 ABC transporter type 1, transmembrane domain LJF99_07620 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_07620 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC LJF99_07620 IPR003439 ABC transporter-like LJF99_07620 IPR003593 AAA+ ATPase domain LJF99_07620 IPR017871 ABC transporter, conserved site LJF99_07640 IPR036413 YaeB-like superfamily LJF99_07640 IPR023368 Uncharacterised protein family UPF0066, conserved site LJF99_07640 IPR040372 YaeB-like LJF99_07640 IPR036414 YaeB, N-terminal domain superfamily LJF99_07640 IPR041369 TrmO, C-terminal LJF99_07640 IPR023370 TrmO-like, N-terminal domain LJF99_07645 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LJF99_07645 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LJF99_07645 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LJF99_07645 IPR016039 Thiolase-like LJF99_07660 IPR005856 Cysteine synthase LJF99_07660 IPR005859 Cysteine synthase CysK LJF99_07660 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LJF99_07660 IPR001926 Pyridoxal-phosphate dependent enzyme LJF99_07660 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LJF99_07665 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LJF99_07665 IPR035895 HPr-like superfamily LJF99_07665 IPR000032 Phosphocarrier protein HPr-like LJF99_07665 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LJF99_07670 IPR040442 Pyruvate kinase-like domain superfamily LJF99_07670 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_07670 IPR036618 PtsI, HPr-binding domain superfamily LJF99_07670 IPR008731 Phosphotransferase system, enzyme I N-terminal LJF99_07670 IPR006318 Phosphotransferase system, enzyme I-like LJF99_07670 IPR036637 Phosphohistidine domain superfamily LJF99_07670 IPR023151 PEP-utilising enzyme, conserved site LJF99_07670 IPR000121 PEP-utilising enzyme, C-terminal LJF99_07670 IPR018274 PEP-utilising enzyme, active site LJF99_07670 IPR008279 PEP-utilising enzyme, mobile domain LJF99_07670 IPR024692 Phosphotransferase system, enzyme I LJF99_07675 IPR011055 Duplicated hybrid motif LJF99_07675 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LJF99_07680 IPR000160 GGDEF domain LJF99_07680 IPR029787 Nucleotide cyclase LJF99_07690 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase LJF99_07690 IPR016174 Di-haem cytochrome, transmembrane LJF99_07700 IPR038729 Rad50/SbcC-type AAA domain LJF99_07700 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07705 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LJF99_07705 IPR026843 Nuclease SbcCD subunit D, C-terminal domain LJF99_07705 IPR029052 Metallo-dependent phosphatase-like LJF99_07705 IPR004593 Nuclease SbcCD subunit D LJF99_07705 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain LJF99_07715 IPR007476 Putative exonuclease, RdgC LJF99_07720 IPR000101 Gamma-glutamyltranspeptidase LJF99_07720 IPR029055 Nucleophile aminohydrolases, N-terminal LJF99_07730 IPR012189 Peptidase M28E, aminopeptidase AP1 LJF99_07730 IPR007280 Peptidase, C-terminal, archaeal/bacterial LJF99_07730 IPR007484 Peptidase M28 LJF99_07740 IPR018209 Pyruvate kinase, active site LJF99_07740 IPR015806 Pyruvate kinase, insert domain superfamily LJF99_07740 IPR036918 Pyruvate kinase, C-terminal domain superfamily LJF99_07740 IPR015795 Pyruvate kinase, C-terminal LJF99_07740 IPR015793 Pyruvate kinase, barrel LJF99_07740 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_07740 IPR040442 Pyruvate kinase-like domain superfamily LJF99_07740 IPR011037 Pyruvate kinase-like, insert domain superfamily LJF99_07740 IPR001697 Pyruvate kinase LJF99_07745 IPR023408 Mechanosensitive ion channel MscS domain superfamily LJF99_07745 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LJF99_07745 IPR006686 Mechanosensitive ion channel MscS, conserved site LJF99_07745 IPR011066 Mechanosensitive ion channel MscS, C-terminal LJF99_07745 IPR006685 Mechanosensitive ion channel MscS LJF99_07745 IPR010920 LSM domain superfamily LJF99_07745 IPR023298 P-type ATPase, transmembrane domain superfamily LJF99_07745 IPR025692 Mechanosensitive ion channel inner membrane domain 1 LJF99_07745 IPR024393 Mechanosensitive ion channel MscS, porin domain LJF99_07770 IPR009057 Homeobox-like domain superfamily LJF99_07770 IPR012337 Ribonuclease H-like superfamily LJF99_07770 IPR038717 Tc1-like transposase, DDE domain LJF99_07770 IPR025959 Winged helix-turn helix domain LJF99_07775 IPR009057 Homeobox-like domain superfamily LJF99_07775 IPR038965 Transposase InsF-like LJF99_07780 IPR016193 Cytidine deaminase-like LJF99_07780 IPR003786 Sulfur carrier protein FdhD LJF99_07790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_07790 IPR005467 Histidine kinase domain LJF99_07790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_07790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_07790 IPR000014 PAS domain LJF99_07790 IPR000700 PAS-associated, C-terminal LJF99_07790 IPR035965 PAS domain superfamily LJF99_07790 IPR013767 PAS fold LJF99_07790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_07790 IPR003660 HAMP domain LJF99_07790 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_07800 IPR024370 PBP domain LJF99_07805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_07805 IPR035906 MetI-like superfamily LJF99_07810 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07810 IPR003593 AAA+ ATPase domain LJF99_07810 IPR017871 ABC transporter, conserved site LJF99_07810 IPR003439 ABC transporter-like LJF99_07810 IPR030921 LPS export ABC transporter, ATP-binding protein LptB LJF99_07815 IPR025877 MobA-like NTP transferase LJF99_07815 IPR013482 Molybdenum cofactor guanylyltransferase LJF99_07815 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_07820 IPR036135 MoeA, N-terminal and linker domain superfamily LJF99_07820 IPR005110 MoeA, N-terminal and linker domain LJF99_07820 IPR036425 MoaB/Mog-like domain superfamily LJF99_07820 IPR005111 MoeA, C-terminal, domain IV LJF99_07820 IPR038987 Molybdopterin biosynthesis protein MoeA-like LJF99_07820 IPR008284 Molybdenum cofactor biosynthesis, conserved site LJF99_07820 IPR001453 MoaB/Mog domain LJF99_07820 IPR036688 MoeA, C-terminal, domain IV superfamily LJF99_07825 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein LJF99_07830 IPR003607 HD/PDEase domain LJF99_07830 IPR037522 HD-GYP domain LJF99_07835 IPR004090 Chemotaxis methyl-accepting receptor LJF99_07835 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_07835 IPR001610 PAC motif LJF99_07835 IPR000014 PAS domain LJF99_07835 IPR035965 PAS domain superfamily LJF99_07835 IPR000700 PAS-associated, C-terminal LJF99_07835 IPR013655 PAS fold-3 LJF99_07845 IPR019663 Uncharacterised protein YbfA LJF99_07865 IPR001789 Signal transduction response regulator, receiver domain LJF99_07865 IPR029151 Periplasmic sensor-like domain superfamily LJF99_07865 IPR011006 CheY-like superfamily LJF99_07865 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_07865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_07865 IPR005467 Histidine kinase domain LJF99_07865 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_07865 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_07865 IPR015387 LuxQ, periplasmic LJF99_07865 IPR035965 PAS domain superfamily LJF99_07865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_07870 IPR000914 Solute-binding protein family 5 domain LJF99_07870 IPR023765 Solute-binding protein family 5, conserved site LJF99_07870 IPR039424 Solute-binding protein family 5 LJF99_07870 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_07875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_07875 IPR035906 MetI-like superfamily LJF99_07880 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LJF99_07880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_07880 IPR035906 MetI-like superfamily LJF99_07885 IPR003593 AAA+ ATPase domain LJF99_07885 IPR003439 ABC transporter-like LJF99_07885 IPR017871 ABC transporter, conserved site LJF99_07885 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07885 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LJF99_07890 IPR017871 ABC transporter, conserved site LJF99_07890 IPR003439 ABC transporter-like LJF99_07890 IPR003593 AAA+ ATPase domain LJF99_07890 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07890 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LJF99_07900 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type LJF99_07905 IPR029018 Beta-hexosaminidase-like, domain 2 LJF99_07905 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal LJF99_07905 IPR025705 Beta-hexosaminidase LJF99_07905 IPR015883 Glycoside hydrolase family 20, catalytic domain LJF99_07905 IPR017853 Glycoside hydrolase superfamily LJF99_07910 IPR004090 Chemotaxis methyl-accepting receptor LJF99_07910 IPR003660 HAMP domain LJF99_07910 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_07910 IPR001610 PAC motif LJF99_07910 IPR000014 PAS domain LJF99_07910 IPR035965 PAS domain superfamily LJF99_07910 IPR013655 PAS fold-3 LJF99_07925 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LJF99_07925 IPR006171 TOPRIM domain LJF99_07925 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LJF99_07925 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LJF99_07925 IPR013497 DNA topoisomerase, type IA, central LJF99_07925 IPR023406 DNA topoisomerase, type IA, active site LJF99_07925 IPR003601 DNA topoisomerase, type IA, domain 2 LJF99_07925 IPR034149 DNA topoisomerase 1, TOPRIM domain LJF99_07925 IPR023405 DNA topoisomerase, type IA, core domain LJF99_07925 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LJF99_07925 IPR028612 DNA topoisomerase I, type IA LJF99_07925 IPR000380 DNA topoisomerase, type IA LJF99_07925 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type LJF99_07925 IPR005733 DNA topoisomerase I, bacterial-type LJF99_07925 IPR013498 DNA topoisomerase, type IA, zn finger LJF99_07930 IPR007079 Succinylarginine dihydrolase LJF99_07930 IPR037031 Succinylarginine dihydrolase superfamily LJF99_07935 IPR002142 Peptidase S49 LJF99_07935 IPR013703 Peptidase S49, N-terminal proteobacteria LJF99_07935 IPR029045 ClpP/crotonase-like domain superfamily LJF99_07940 IPR036291 NAD(P)-binding domain superfamily LJF99_07940 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_07940 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_07945 IPR005119 LysR, substrate-binding LJF99_07945 IPR036390 Winged helix DNA-binding domain superfamily LJF99_07945 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_07945 IPR000847 Transcription regulator HTH, LysR LJF99_07950 IPR036259 MFS transporter superfamily LJF99_07950 IPR011701 Major facilitator superfamily LJF99_07950 IPR004750 Sugar efflux LJF99_07950 IPR020846 Major facilitator superfamily domain LJF99_07955 IPR004839 Aminotransferase, class I/classII LJF99_07955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_07955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_07955 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_07955 IPR027619 Putative C-S lyase LJF99_07965 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_07965 IPR000847 Transcription regulator HTH, LysR LJF99_07965 IPR005119 LysR, substrate-binding LJF99_07965 IPR036390 Winged helix DNA-binding domain superfamily LJF99_07970 IPR042109 Adenylosuccinate synthetase, domain 1 LJF99_07970 IPR042110 Adenylosuccinate synthetase, domain 2 LJF99_07970 IPR042111 Adenylosuccinate synthetase, domain 3 LJF99_07970 IPR001114 Adenylosuccinate synthetase LJF99_07970 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_07975 IPR036610 PEBP-like superfamily LJF99_07975 IPR005247 YbhB/YbcL LJF99_07975 IPR008914 Phosphatidylethanolamine-binding protein LJF99_07985 IPR014635 Alpha-amylase, MalS type LJF99_07985 IPR017853 Glycoside hydrolase superfamily LJF99_07985 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_07995 IPR000792 Transcription regulator LuxR, C-terminal LJF99_07995 IPR001789 Signal transduction response regulator, receiver domain LJF99_07995 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_07995 IPR011006 CheY-like superfamily LJF99_08030 IPR029787 Nucleotide cyclase LJF99_08030 IPR000160 GGDEF domain LJF99_08035 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal LJF99_08035 IPR012094 tRNA(Ile)-lysidine synthase LJF99_08035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_08035 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LJF99_08035 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal LJF99_08035 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain LJF99_08040 IPR024079 Metallopeptidase, catalytic domain superfamily LJF99_08040 IPR000718 Peptidase M13 LJF99_08040 IPR018497 Peptidase M13, C-terminal domain LJF99_08040 IPR042089 Peptidase M13, domain 2 LJF99_08040 IPR008753 Peptidase M13, N-terminal domain LJF99_08050 IPR003439 ABC transporter-like LJF99_08050 IPR032781 ABC-transporter extension domain LJF99_08050 IPR032524 ABC transporter Uup, C-terminal LJF99_08050 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LJF99_08050 IPR003593 AAA+ ATPase domain LJF99_08050 IPR017871 ABC transporter, conserved site LJF99_08050 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_08055 IPR000182 GNAT domain LJF99_08055 IPR016181 Acyl-CoA N-acyltransferase LJF99_08060 IPR002293 Amino acid/polyamine transporter I LJF99_08065 IPR004694 Hydroxy amino acid transporter LJF99_08070 IPR000847 Transcription regulator HTH, LysR LJF99_08070 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08070 IPR036390 Winged helix DNA-binding domain superfamily LJF99_08070 IPR005119 LysR, substrate-binding LJF99_08080 IPR023685 Pyridoxal kinase PdxY LJF99_08080 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase LJF99_08080 IPR004625 Pyridoxine kinase LJF99_08080 IPR029056 Ribokinase-like LJF99_08085 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_08085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_08085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_08085 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily LJF99_08085 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal LJF99_08085 IPR000310 Orn/Lys/Arg decarboxylase, major domain LJF99_08085 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal LJF99_08085 IPR011193 Ornithine/lysine/arginine decarboxylase LJF99_08090 IPR002293 Amino acid/polyamine transporter I LJF99_08090 IPR004754 Amino acid antiporter LJF99_08095 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_08095 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_08095 IPR039420 Transcriptional regulatory protein WalR-like LJF99_08095 IPR040970 CadC C-terminal domain 1 LJF99_08095 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08095 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_08100 IPR001095 Acetyl-CoA carboxylase, alpha subunit LJF99_08100 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal LJF99_08100 IPR029045 ClpP/crotonase-like domain superfamily LJF99_08105 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain LJF99_08105 IPR040982 DNA polymerase III alpha subunit finger domain LJF99_08105 IPR004013 PHP domain LJF99_08105 IPR003141 Polymerase/histidinol phosphatase, N-terminal LJF99_08105 IPR016195 Polymerase/histidinol phosphatase-like LJF99_08105 IPR004805 DNA polymerase III, alpha subunit LJF99_08105 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LJF99_08105 IPR029460 DNA polymerase, helix-hairpin-helix motif LJF99_08105 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain LJF99_08110 IPR012337 Ribonuclease H-like superfamily LJF99_08110 IPR024567 Ribonuclease HII/HIII domain LJF99_08110 IPR036397 Ribonuclease H superfamily LJF99_08110 IPR022898 Ribonuclease HII LJF99_08110 IPR001352 Ribonuclease HII/HIII LJF99_08115 IPR003835 Glycosyl transferase, family 19 LJF99_08120 IPR001451 Hexapeptide repeat LJF99_08120 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily LJF99_08120 IPR011004 Trimeric LpxA-like superfamily LJF99_08120 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal LJF99_08120 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LJF99_08125 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ LJF99_08125 IPR029069 HotDog domain superfamily LJF99_08125 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ LJF99_08130 IPR018357 Hexapeptide transferase, conserved site LJF99_08130 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD LJF99_08130 IPR011004 Trimeric LpxA-like superfamily LJF99_08130 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region LJF99_08130 IPR001451 Hexapeptide repeat LJF99_08135 IPR005632 Chaperone protein Skp LJF99_08135 IPR024930 Skp domain superfamily LJF99_08140 IPR000184 Bacterial surface antigen (D15) LJF99_08140 IPR010827 POTRA domain, BamA/TamA-like LJF99_08140 IPR039910 Surface antigen D15-like LJF99_08140 IPR023707 Outer membrane protein assembly factor BamA LJF99_08140 IPR034746 POTRA domain LJF99_08145 IPR008915 Peptidase M50 LJF99_08145 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase LJF99_08145 IPR036034 PDZ superfamily LJF99_08145 IPR041489 PDZ domain 6 LJF99_08145 IPR001478 PDZ domain LJF99_08150 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase LJF99_08150 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal LJF99_08150 IPR036169 DXP reductoisomerase, C-terminal domain superfamily LJF99_08150 IPR036291 NAD(P)-binding domain superfamily LJF99_08150 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal LJF99_08150 IPR026877 DXP reductoisomerase C-terminal domain LJF99_08155 IPR000374 Phosphatidate cytidylyltransferase LJF99_08160 IPR001441 Decaprenyl diphosphate synthase-like LJF99_08160 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site LJF99_08160 IPR036424 Decaprenyl diphosphate synthase-like superfamily LJF99_08165 IPR036191 RRF superfamily LJF99_08165 IPR023584 Ribosome recycling factor domain LJF99_08165 IPR002661 Ribosome recycling factor LJF99_08170 IPR036393 Acetylglutamate kinase-like superfamily LJF99_08170 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_08170 IPR011817 Uridylate kinase LJF99_08170 IPR015963 Uridylate kinase, bacteria LJF99_08175 IPR036402 Elongation factor Ts, dimerisation domain superfamily LJF99_08175 IPR001816 Translation elongation factor EFTs/EF1B LJF99_08175 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation LJF99_08175 IPR009060 UBA-like superfamily LJF99_08175 IPR018101 Translation elongation factor Ts, conserved site LJF99_08180 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily LJF99_08180 IPR001865 Ribosomal protein S2 LJF99_08180 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid LJF99_08180 IPR018130 Ribosomal protein S2, conserved site LJF99_08185 IPR000994 Peptidase M24 LJF99_08185 IPR001714 Peptidase M24, methionine aminopeptidase LJF99_08185 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 LJF99_08185 IPR036005 Creatinase/aminopeptidase-like LJF99_08195 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 LJF99_08195 IPR011004 Trimeric LpxA-like superfamily LJF99_08195 IPR001451 Hexapeptide repeat LJF99_08195 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family LJF99_08195 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily LJF99_08195 IPR018357 Hexapeptide transferase, conserved site LJF99_08200 IPR020911 Uncharacterised protein family UPF0325 LJF99_08205 IPR036878 Glucose permease domain IIB LJF99_08205 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LJF99_08205 IPR003352 Phosphotransferase system, EIIC LJF99_08205 IPR013013 Phosphotransferase system, EIIC component, type 1 LJF99_08205 IPR001996 Phosphotransferase system, IIB component, type 1 LJF99_08205 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LJF99_08205 IPR011299 PTS system glucose-specific IIBC component LJF99_08210 IPR010794 Maltose operon periplasmic LJF99_08225 IPR023738 Maltoporin LJF99_08225 IPR003192 Porin, LamB-type LJF99_08225 IPR036998 Porin, LamB-type superfamily LJF99_08230 IPR001094 Flavodoxin-like LJF99_08230 IPR029039 Flavoprotein-like superfamily LJF99_08230 IPR008254 Flavodoxin/nitric oxide synthase LJF99_08235 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_08235 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LJF99_08235 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_08240 IPR007384 Protein of unknown function UCP006257 LJF99_08240 IPR023376 YqcC-like domain LJF99_08240 IPR036814 YqcC-like superfamily LJF99_08265 IPR016908 Uncharacterised conserved protein UCP029037 LJF99_08270 IPR038228 Syd superfamily LJF99_08270 IPR009948 Syd LJF99_08275 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal LJF99_08275 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF LJF99_08275 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 LJF99_08285 IPR029787 Nucleotide cyclase LJF99_08285 IPR000160 GGDEF domain LJF99_08290 IPR031100 LOG family LJF99_08290 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily LJF99_08290 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal LJF99_08290 IPR021826 Domain of unknown function DUF3412 LJF99_08295 IPR020045 DNA polymerase I-like, H3TH domain LJF99_08295 IPR038969 Flap endonuclease LJF99_08295 IPR036279 5'-3' exonuclease, C-terminal domain superfamily LJF99_08295 IPR002421 5'-3' exonuclease, N-terminal LJF99_08295 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal LJF99_08295 IPR022895 Flap endonuclease Xni LJF99_08295 IPR008918 Helix-hairpin-helix motif, class 2 LJF99_08295 IPR029060 PIN-like domain superfamily LJF99_08300 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LJF99_08300 IPR024084 Isopropylmalate dehydrogenase-like domain LJF99_08300 IPR040978 Hypothetical protein TT1725 LJF99_08310 IPR040739 RlmM ferredoxin-like domain LJF99_08310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_08310 IPR011224 Ribosomal RNA large subunit methyltransferase M LJF99_08310 IPR002877 Ribosomal RNA methyltransferase FtsJ domain LJF99_08315 IPR006696 Protein of unknown function DUF423 LJF99_08325 IPR036390 Winged helix DNA-binding domain superfamily LJF99_08325 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08325 IPR005119 LysR, substrate-binding LJF99_08325 IPR000847 Transcription regulator HTH, LysR LJF99_08330 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_08330 IPR003660 HAMP domain LJF99_08335 IPR001126 UmuC domain LJF99_08335 IPR024728 DNA polymerase type-Y, HhH motif LJF99_08335 IPR022880 DNA polymerase IV LJF99_08335 IPR017961 DNA polymerase, Y-family, little finger domain LJF99_08335 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LJF99_08350 IPR003374 ApbE-like superfamily LJF99_08350 IPR024932 Flavin transferase ApbE LJF99_08350 IPR042159 Flavin-trafficking protein ApbE LJF99_08355 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LJF99_08355 IPR001433 Oxidoreductase FAD/NAD(P)-binding LJF99_08355 IPR017927 FAD-binding domain, ferredoxin reductase-type LJF99_08355 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LJF99_08355 IPR017938 Riboflavin synthase-like beta-barrel LJF99_08355 IPR012675 Beta-grasp domain superfamily LJF99_08355 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_08355 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_08355 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F LJF99_08360 IPR003667 NqrDE/RnfAE LJF99_08360 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E LJF99_08365 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D LJF99_08365 IPR003667 NqrDE/RnfAE LJF99_08370 IPR007329 FMN-binding LJF99_08370 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C LJF99_08375 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B LJF99_08375 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD LJF99_08380 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A LJF99_08380 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain LJF99_08380 IPR011053 Single hybrid motif LJF99_08390 IPR036065 BolA-like superfamily LJF99_08390 IPR002634 BolA protein LJF99_08395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_08395 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD LJF99_08395 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_08395 IPR007848 Methyltransferase small domain LJF99_08405 IPR029000 Cyclophilin-like domain superfamily LJF99_08405 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site LJF99_08405 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain LJF99_08415 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 LJF99_08415 IPR020846 Major facilitator superfamily domain LJF99_08415 IPR036259 MFS transporter superfamily LJF99_08415 IPR011701 Major facilitator superfamily LJF99_08420 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily LJF99_08420 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like LJF99_08420 IPR003055 Nucleoside-specific channel-forming protein Tsx LJF99_08425 IPR035570 UPF0234, N-terminal LJF99_08425 IPR035571 UPF0234-like, C-terminal LJF99_08425 IPR007551 Protein of unknown function DUF520 LJF99_08425 IPR036183 YajQ-like superfamily LJF99_08430 IPR013752 Ketopantoate reductase, C-terminal domain LJF99_08430 IPR036291 NAD(P)-binding domain superfamily LJF99_08430 IPR013332 Ketopantoate reductase, N-terminal domain LJF99_08430 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_08430 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LJF99_08430 IPR003710 Ketopantoate reductase ApbA/PanE LJF99_08435 IPR002818 DJ-1/PfpI LJF99_08435 IPR006287 Protein/nucleic acid deglycase DJ-1 LJF99_08435 IPR029062 Class I glutamine amidotransferase-like LJF99_08445 IPR005128 Alpha-acetolactate decarboxylase LJF99_08450 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain LJF99_08450 IPR005119 LysR, substrate-binding LJF99_08450 IPR000847 Transcription regulator HTH, LysR LJF99_08450 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08450 IPR036390 Winged helix DNA-binding domain superfamily LJF99_08455 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily LJF99_08455 IPR037820 NdvB, GH94N domain 1 LJF99_08455 IPR010383 Glycosyl hydrolase 94 LJF99_08455 IPR033432 Glycosyl hydrolase 36, catalytic domain LJF99_08455 IPR012341 Six-hairpin glycosidase-like superfamily LJF99_08455 IPR008928 Six-hairpin glycosidase superfamily LJF99_08455 IPR037824 NdvB, GH94N domain 2 LJF99_08455 IPR009342 Putative carbohydrate binding domain LJF99_08455 IPR011013 Galactose mutarotase-like domain superfamily LJF99_08455 IPR019282 Domain of unknown function DUF2329 LJF99_08465 IPR012336 Thioredoxin-like fold LJF99_08465 IPR036249 Thioredoxin-like superfamily LJF99_08465 IPR013766 Thioredoxin domain LJF99_08465 IPR023171 Na/H antiporter domain superfamily LJF99_08465 IPR004670 Na+/H+ antiporter NhaA LJF99_08470 IPR016040 NAD(P)-binding domain LJF99_08470 IPR036291 NAD(P)-binding domain superfamily LJF99_08470 IPR005886 UDP-glucose 4-epimerase LJF99_08475 IPR017938 Riboflavin synthase-like beta-barrel LJF99_08475 IPR001433 Oxidoreductase FAD/NAD(P)-binding LJF99_08475 IPR012675 Beta-grasp domain superfamily LJF99_08475 IPR017927 FAD-binding domain, ferredoxin reductase-type LJF99_08475 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LJF99_08475 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_08475 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LJF99_08475 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_08480 IPR011254 Prismane-like superfamily LJF99_08480 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase LJF99_08480 IPR016099 Prismane-like, alpha/beta-sandwich LJF99_08480 IPR010048 Hydroxylamine reductase LJF99_08480 IPR016100 Prismane, alpha-bundle LJF99_08485 IPR002177 DNA-binding protein Dps LJF99_08485 IPR023188 DNA-binding protein Dps, conserved site LJF99_08485 IPR012347 Ferritin-like LJF99_08485 IPR009078 Ferritin-like superfamily LJF99_08485 IPR008331 Ferritin/DPS protein domain LJF99_08510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_08510 IPR003333 Mycolic acid cyclopropane synthase LJF99_08525 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_08525 IPR036291 NAD(P)-binding domain superfamily LJF99_08525 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_08535 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily LJF99_08535 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily LJF99_08535 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LJF99_08535 IPR002081 Cryptochrome/DNA photolyase class 1 LJF99_08535 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LJF99_08535 IPR006050 DNA photolyase, N-terminal LJF99_08535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_08540 IPR000551 MerR-type HTH domain LJF99_08540 IPR009061 Putative DNA-binding domain superfamily LJF99_08545 IPR013560 Domain of unknown function DUF1722 LJF99_08575 IPR036263 Chorismate mutase type II superfamily LJF99_08575 IPR002912 ACT domain LJF99_08575 IPR002701 Chorismate mutase II, prokaryotic-type LJF99_08575 IPR010952 Chorismate mutase, gammaproteobacteria LJF99_08575 IPR001086 Prephenate dehydratase LJF99_08575 IPR018528 Prephenate dehydratase, conserved site LJF99_08575 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase LJF99_08575 IPR036979 Chorismate mutase domain superfamily LJF99_08600 IPR011042 Six-bladed beta-propeller, TolB-like LJF99_08600 IPR012938 Glucose/Sorbosone dehydrogenase LJF99_08600 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase LJF99_08610 IPR004090 Chemotaxis methyl-accepting receptor LJF99_08610 IPR003660 HAMP domain LJF99_08610 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_08620 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_08620 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_08620 IPR036291 NAD(P)-binding domain superfamily LJF99_08645 IPR001333 Peptidase M32, carboxypeptidase Taq LJF99_08655 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily LJF99_08655 IPR004026 Ada DNA repair, metal-binding LJF99_08655 IPR035451 Ada-like domain superfamily LJF99_08655 IPR011257 DNA glycosylase LJF99_08655 IPR003265 HhH-GPD domain LJF99_08655 IPR009057 Homeobox-like domain superfamily LJF99_08655 IPR018060 DNA binding HTH domain, AraC-type LJF99_08655 IPR018062 HTH domain AraC-type, conserved site LJF99_08655 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LJF99_08655 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LJF99_08660 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site LJF99_08660 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding LJF99_08660 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain LJF99_08660 IPR023546 Methylated-DNA--protein-cysteine methyltransferase LJF99_08660 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily LJF99_08660 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08660 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain LJF99_08670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_08670 IPR004033 UbiE/COQ5 methyltransferase LJF99_08670 IPR023576 UbiE/COQ5 methyltransferase, conserved site LJF99_08675 IPR010696 Protein of unknown function DUF1272 LJF99_08690 IPR001123 Amino acid exporter protein, LeuE-type LJF99_08690 IPR004778 Homoserine/Threonine efflux protein LJF99_08695 IPR005119 LysR, substrate-binding LJF99_08695 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain LJF99_08695 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08695 IPR036390 Winged helix DNA-binding domain superfamily LJF99_08695 IPR000847 Transcription regulator HTH, LysR LJF99_08700 IPR016039 Thiolase-like LJF99_08700 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LJF99_08700 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LJF99_08700 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LJF99_08710 IPR001789 Signal transduction response regulator, receiver domain LJF99_08710 IPR011006 CheY-like superfamily LJF99_08720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_08720 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_08720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_08720 IPR036641 HPT domain superfamily LJF99_08720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_08720 IPR005467 Histidine kinase domain LJF99_08720 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_08720 IPR004105 Histidine kinase CheA-like, homodimeric domain LJF99_08720 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily LJF99_08720 IPR036061 CheW-like domain superfamily LJF99_08720 IPR002545 CheW-like domain LJF99_08725 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LJF99_08725 IPR003660 HAMP domain LJF99_08725 IPR004090 Chemotaxis methyl-accepting receptor LJF99_08725 IPR000727 Target SNARE coiled-coil homology domain LJF99_08725 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_08730 IPR002545 CheW-like domain LJF99_08730 IPR039315 Chemotaxis protein CheW LJF99_08730 IPR036061 CheW-like domain superfamily LJF99_08735 IPR003660 HAMP domain LJF99_08735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_08735 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding LJF99_08735 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily LJF99_08735 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LJF99_08735 IPR004090 Chemotaxis methyl-accepting receptor LJF99_08740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_08740 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LJF99_08740 IPR000780 MCP methyltransferase, CheR-type LJF99_08740 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LJF99_08740 IPR026024 Chemotaxis protein methyltransferase CheR LJF99_08740 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily LJF99_08745 IPR038592 CheD-like superfamily LJF99_08745 IPR005659 Chemoreceptor glutamine deamidase CheD LJF99_08745 IPR011324 Cytotoxic necrotizing factor-like, catalytic LJF99_08750 IPR001789 Signal transduction response regulator, receiver domain LJF99_08750 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase LJF99_08750 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type LJF99_08750 IPR035909 Methylesterase CheB, C-terminal LJF99_08750 IPR011006 CheY-like superfamily LJF99_08755 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_08755 IPR000192 Aminotransferase class V domain LJF99_08755 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LJF99_08755 IPR010970 Cysteine desulfurase, SufS LJF99_08755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_08755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_08780 IPR001789 Signal transduction response regulator, receiver domain LJF99_08780 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_08780 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_08780 IPR036641 HPT domain superfamily LJF99_08780 IPR019247 Histidine kinase BarA, N-terminal LJF99_08780 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_08780 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_08780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_08780 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_08780 IPR003660 HAMP domain LJF99_08780 IPR011006 CheY-like superfamily LJF99_08780 IPR005467 Histidine kinase domain LJF99_08785 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08785 IPR011006 CheY-like superfamily LJF99_08785 IPR030864 Transcriptional regulatory protein RcsB LJF99_08785 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_08785 IPR001789 Signal transduction response regulator, receiver domain LJF99_08785 IPR000792 Transcription regulator LuxR, C-terminal LJF99_08790 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_08790 IPR001789 Signal transduction response regulator, receiver domain LJF99_08790 IPR000792 Transcription regulator LuxR, C-terminal LJF99_08790 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08790 IPR030864 Transcriptional regulatory protein RcsB LJF99_08790 IPR011006 CheY-like superfamily LJF99_08800 IPR008969 Carboxypeptidase-like, regulatory domain superfamily LJF99_08800 IPR031917 Pilus assembly protein, C-terminal domain LJF99_08800 IPR032636 Pilus assembly protein, E-set like domain LJF99_08820 IPR000014 PAS domain LJF99_08820 IPR000700 PAS-associated, C-terminal LJF99_08820 IPR001610 PAC motif LJF99_08820 IPR029787 Nucleotide cyclase LJF99_08820 IPR000160 GGDEF domain LJF99_08820 IPR029016 GAF-like domain superfamily LJF99_08820 IPR035919 EAL domain superfamily LJF99_08820 IPR035965 PAS domain superfamily LJF99_08820 IPR001633 EAL domain LJF99_08820 IPR003018 GAF domain LJF99_08820 IPR013767 PAS fold LJF99_08825 IPR032525 Peptidase family U32, C-terminal LJF99_08825 IPR001539 Peptidase U32 LJF99_08830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_08830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_08835 IPR029066 PLP-binding barrel LJF99_08835 IPR000821 Alanine racemase LJF99_08835 IPR001608 Alanine racemase, N-terminal LJF99_08835 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site LJF99_08835 IPR011079 Alanine racemase, C-terminal LJF99_08835 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LJF99_08840 IPR003593 AAA+ ATPase domain LJF99_08840 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily LJF99_08840 IPR007692 DNA helicase, DnaB type LJF99_08840 IPR007694 DNA helicase, DnaB-like, C-terminal LJF99_08840 IPR007693 DNA helicase, DnaB-like, N-terminal LJF99_08840 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LJF99_08840 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_08855 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LJF99_08855 IPR035919 EAL domain superfamily LJF99_08855 IPR001633 EAL domain LJF99_08860 IPR008334 5'-Nucleotidase, C-terminal LJF99_08860 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LJF99_08860 IPR006146 5'-Nucleotidase, conserved site LJF99_08860 IPR006179 5'-Nucleotidase/apyrase LJF99_08860 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LJF99_08860 IPR029052 Metallo-dependent phosphatase-like LJF99_08860 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN LJF99_08880 IPR003593 AAA+ ATPase domain LJF99_08880 IPR011006 CheY-like superfamily LJF99_08880 IPR002197 DNA binding HTH domain, Fis-type LJF99_08880 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_08880 IPR001789 Signal transduction response regulator, receiver domain LJF99_08880 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_08880 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_08880 IPR025944 Sigma-54 interaction domain, conserved site LJF99_08880 IPR009057 Homeobox-like domain superfamily LJF99_08885 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LJF99_08885 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal LJF99_08885 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily LJF99_08895 IPR007236 SlyX LJF99_08900 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LJF99_08905 IPR012658 Conserved hypothetical protein CHP02443 LJF99_08915 IPR036061 CheW-like domain superfamily LJF99_08915 IPR001789 Signal transduction response regulator, receiver domain LJF99_08915 IPR024181 Chemotaxis response regulator CheV LJF99_08915 IPR002545 CheW-like domain LJF99_08915 IPR011006 CheY-like superfamily LJF99_08920 IPR029058 Alpha/Beta hydrolase fold LJF99_08920 IPR000073 Alpha/beta hydrolase fold-1 LJF99_08920 IPR000952 AB hydrolase 4, conserved site LJF99_08920 IPR012020 AB hydrolase 4 family LJF99_08925 IPR003018 GAF domain LJF99_08925 IPR029016 GAF-like domain superfamily LJF99_08925 IPR000160 GGDEF domain LJF99_08925 IPR029787 Nucleotide cyclase LJF99_08925 IPR016132 Phytochrome chromophore attachment domain LJF99_08925 IPR001294 Phytochrome LJF99_08925 IPR013515 Phytochrome, central region LJF99_08925 IPR035919 EAL domain superfamily LJF99_08925 IPR001633 EAL domain LJF99_08930 IPR010648 Uncharacterised protein family UPF0270 LJF99_08930 IPR036685 YehU-like superfamily LJF99_08935 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation LJF99_08935 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type LJF99_08935 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_08935 IPR036291 NAD(P)-binding domain superfamily LJF99_08935 IPR017476 UDP-glucose/GDP-mannose dehydrogenase LJF99_08935 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal LJF99_08935 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal LJF99_08935 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily LJF99_08940 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LJF99_08940 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_08940 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_08940 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB LJF99_08940 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_08945 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_08945 IPR001173 Glycosyltransferase 2-like LJF99_08945 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase LJF99_08955 IPR002509 NodB homology domain LJF99_08955 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LJF99_08955 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable LJF99_08960 IPR003342 Glycosyl transferase family 39/83 LJF99_08960 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase LJF99_08965 IPR000390 Small multidrug resistance protein family LJF99_08965 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE LJF99_08965 IPR000620 EamA domain LJF99_08970 IPR000390 Small multidrug resistance protein family LJF99_08970 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF LJF99_08975 IPR006083 Phosphoribulokinase/uridine kinase LJF99_08975 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_08975 IPR006082 Phosphoribulokinase LJF99_08990 IPR015946 K homology domain-like, alpha/beta LJF99_08990 IPR003718 OsmC/Ohr family LJF99_08990 IPR036102 OsmC/Ohr superfamily LJF99_08995 IPR000595 Cyclic nucleotide-binding domain LJF99_08995 IPR018490 Cyclic nucleotide-binding-like LJF99_08995 IPR018488 Cyclic nucleotide-binding, conserved site LJF99_08995 IPR012318 Crp-type HTH domain LJF99_08995 IPR014710 RmlC-like jelly roll fold LJF99_08995 IPR018335 Transcription regulator HTH, Crp-type, conserved site LJF99_08995 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_08995 IPR036390 Winged helix DNA-binding domain superfamily LJF99_09000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_09000 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LJF99_09000 IPR013216 Methyltransferase type 11 LJF99_09005 IPR041029 N-acetylglucosamine binding protein A domain 2 LJF99_09005 IPR004302 Cellulose/chitin-binding protein, N-terminal LJF99_09005 IPR014756 Immunoglobulin E-set LJF99_09005 IPR020879 N-acetylglucosamine-binding protein A LJF99_09010 IPR019503 Peptidase M66 domain LJF99_09010 IPR040966 Metalloprotease StcE, C-terminal LJF99_09010 IPR022218 ToxR activated gene A lipoprotein domain LJF99_09030 IPR001387 Cro/C1-type helix-turn-helix domain LJF99_09030 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_09040 IPR036259 MFS transporter superfamily LJF99_09040 IPR026032 Probable 3-phenylpropionic acid transporter LJF99_09040 IPR024989 Major facilitator superfamily associated domain LJF99_09045 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_09045 IPR010917 TonB-dependent receptor, conserved site LJF99_09045 IPR039426 Vitamin B12 transporter BtuB-like LJF99_09045 IPR010916 TonB box, conserved site LJF99_09045 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_09045 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_09045 IPR012910 TonB-dependent receptor, plug domain LJF99_09065 IPR012349 FMN-binding split barrel LJF99_09065 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative LJF99_09065 IPR014419 Heme utilization protein HutZ LJF99_09070 IPR010413 Intracellular heme transport protein HutX-like LJF99_09080 IPR037294 ABC transporter, BtuC-like LJF99_09080 IPR000522 ABC transporter, permease protein, BtuC-like LJF99_09085 IPR003593 AAA+ ATPase domain LJF99_09085 IPR003439 ABC transporter-like LJF99_09085 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09085 IPR015863 ABC transporter, hemin import, HmuV LJF99_09095 IPR001509 NAD-dependent epimerase/dehydratase LJF99_09095 IPR036291 NAD(P)-binding domain superfamily LJF99_09105 IPR023346 Lysozyme-like domain superfamily LJF99_09105 IPR000189 Prokaryotic transglycosylase, active site LJF99_09105 IPR008258 Transglycosylase SLT domain 1 LJF99_09110 IPR017871 ABC transporter, conserved site LJF99_09110 IPR003593 AAA+ ATPase domain LJF99_09110 IPR032781 ABC-transporter extension domain LJF99_09110 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09110 IPR022374 Energy-dependent translational throttle protein EttA LJF99_09110 IPR003439 ABC transporter-like LJF99_09125 IPR036869 Chaperone J-domain superfamily LJF99_09125 IPR007791 Co-chaperone DjlA, N-terminal LJF99_09125 IPR001623 DnaJ domain LJF99_09125 IPR029024 TerB-like LJF99_09125 IPR023749 Co-chaperone DjlA LJF99_09130 IPR005835 Nucleotidyl transferase domain LJF99_09130 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_09135 IPR002575 Aminoglycoside phosphotransferase LJF99_09135 IPR011009 Protein kinase-like domain superfamily LJF99_09140 IPR020889 LPS-assembly protein LptD LJF99_09140 IPR007543 LptD, C-terminal LJF99_09140 IPR005653 Organic solvent tolerance-like, N-terminal LJF99_09145 IPR027304 Trigger factor/SurA domain superfamily LJF99_09145 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LJF99_09145 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LJF99_09145 IPR023034 Peptidyl-prolyl isomerase SurA LJF99_09145 IPR015391 SurA N-terminal LJF99_09150 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase LJF99_09150 IPR005255 PdxA family LJF99_09155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_09155 IPR011530 Ribosomal RNA adenine dimethylase LJF99_09155 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal LJF99_09155 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LJF99_09155 IPR023165 rRNA adenine dimethylase-like LJF99_09155 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site LJF99_09160 IPR036767 ApaG domain superfamily LJF99_09160 IPR023065 Uncharacterised protein family ApaG LJF99_09160 IPR007474 ApaG domain LJF99_09165 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LJF99_09165 IPR029052 Metallo-dependent phosphatase-like LJF99_09165 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) LJF99_09180 IPR011251 Luciferase-like domain LJF99_09180 IPR036661 Luciferase-like domain superfamily LJF99_09180 IPR019949 Luciferase family oxidoreductase, group 1 LJF99_09190 IPR037522 HD-GYP domain LJF99_09190 IPR003607 HD/PDEase domain LJF99_09200 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_09200 IPR020845 AMP-binding, conserved site LJF99_09200 IPR000873 AMP-dependent synthetase/ligase LJF99_09205 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LJF99_09210 IPR014100 GTP-binding protein Obg/CgtA LJF99_09210 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09210 IPR006073 GTP binding domain LJF99_09210 IPR036726 GTP1/OBG domain superfamily LJF99_09210 IPR031167 OBG-type guanine nucleotide-binding (G) domain LJF99_09210 IPR006074 GTP1/OBG, conserved site LJF99_09210 IPR035101 GTP-binding protein, Obg-type LJF99_09210 IPR006169 GTP1/OBG domain LJF99_09215 IPR001684 Ribosomal protein L27 LJF99_09215 IPR018261 Ribosomal protein L27, conserved site LJF99_09220 IPR036164 L21-like superfamily LJF99_09220 IPR028909 Ribosomal protein L21-like LJF99_09220 IPR018258 Ribosomal protein L21, conserved site LJF99_09220 IPR001787 Ribosomal protein L21 LJF99_09225 IPR000092 Polyprenyl synthetase LJF99_09225 IPR033749 Polyprenyl synthetase, conserved site LJF99_09225 IPR008949 Isoprenoid synthase domain superfamily LJF99_09230 IPR019201 Protein of unknown function DUF2065 LJF99_09235 IPR010200 HflC LJF99_09235 IPR036013 Band 7/SPFH domain superfamily LJF99_09235 IPR001107 Band 7 domain LJF99_09240 IPR036013 Band 7/SPFH domain superfamily LJF99_09240 IPR010201 HflK LJF99_09240 IPR020980 Menbrane protein HflK, N-terminal LJF99_09240 IPR001107 Band 7 domain LJF99_09240 IPR001972 Stomatin family LJF99_09245 IPR032305 GTP-binding protein, middle domain LJF99_09245 IPR035647 EF-G domain III/V-like LJF99_09245 IPR030394 HflX-type guanine nucleotide-binding (G) domain LJF99_09245 IPR006073 GTP binding domain LJF99_09245 IPR016496 GTPase HflX LJF99_09245 IPR025121 GTPase HflX, N-terminal LJF99_09245 IPR042108 GTPase HflX, N-terminal domain superfamily LJF99_09245 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09250 IPR005001 RNA-binding protein Hfq LJF99_09250 IPR010920 LSM domain superfamily LJF99_09255 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09255 IPR039657 Dimethylallyltransferase LJF99_09255 IPR018022 IPP transferase LJF99_09260 IPR037198 MutL, C-terminal domain superfamily LJF99_09260 IPR020667 DNA mismatch repair protein, MutL LJF99_09260 IPR014762 DNA mismatch repair, conserved site LJF99_09260 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms LJF99_09260 IPR014790 MutL, C-terminal, dimerisation LJF99_09260 IPR042120 MutL, C-terminal domain, dimerisation subdomain LJF99_09260 IPR042121 MutL, C-terminal domain, regulatory subdomain LJF99_09260 IPR002099 DNA mismatch repair protein family, N-terminal LJF99_09260 IPR013507 DNA mismatch repair protein, S5 domain 2-like LJF99_09260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_09260 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_09260 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_09265 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LJF99_09270 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09270 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE LJF99_09275 IPR029056 Ribokinase-like LJF99_09275 IPR017953 Carbohydrate kinase, predicted, conserved site LJF99_09275 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase LJF99_09275 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr LJF99_09275 IPR004443 YjeF N-terminal domain LJF99_09275 IPR036652 YjeF N-terminal domain superfamily LJF99_09285 IPR009051 Alpha-helical ferredoxin LJF99_09285 IPR013542 Domain of unknown function DUF1730 LJF99_09285 IPR004453 Epoxyqueuosine reductase QueG LJF99_09285 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_09285 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_09290 IPR000600 ROK family LJF99_09300 IPR018449 NIL domain LJF99_09300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09300 IPR026253 Methionine import ATP-binding protein MetN LJF99_09300 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria LJF99_09300 IPR003439 ABC transporter-like LJF99_09300 IPR017871 ABC transporter, conserved site LJF99_09300 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal LJF99_09300 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain LJF99_09300 IPR003593 AAA+ ATPase domain LJF99_09305 IPR035906 MetI-like superfamily LJF99_09305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_09310 IPR004872 Lipoprotein NlpA family LJF99_09315 IPR006645 NusG, N-terminal LJF99_09315 IPR036735 NusG, N-terminal domain superfamily LJF99_09315 IPR010215 Transcription antitermination protein RfaH LJF99_09320 IPR000727 Target SNARE coiled-coil homology domain LJF99_09320 IPR004090 Chemotaxis methyl-accepting receptor LJF99_09320 IPR003660 HAMP domain LJF99_09320 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LJF99_09320 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_09335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_09335 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_09335 IPR019247 Histidine kinase BarA, N-terminal LJF99_09335 IPR036641 HPT domain superfamily LJF99_09335 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_09335 IPR003660 HAMP domain LJF99_09335 IPR011006 CheY-like superfamily LJF99_09335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_09335 IPR001789 Signal transduction response regulator, receiver domain LJF99_09335 IPR005467 Histidine kinase domain LJF99_09335 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_09335 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_09345 IPR006674 HD domain LJF99_09345 IPR003607 HD/PDEase domain LJF99_09345 IPR020779 dNTP triphosphohydrolase, type 1 LJF99_09345 IPR006261 dNTP triphosphohydrolase LJF99_09345 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily LJF99_09350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_09350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_09350 IPR005467 Histidine kinase domain LJF99_09350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_09350 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_09350 IPR011006 CheY-like superfamily LJF99_09350 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily LJF99_09350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_09350 IPR040642 Histidine kinase receptor ArcB, transmembrane domain LJF99_09350 IPR000700 PAS-associated, C-terminal LJF99_09350 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_09350 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB LJF99_09350 IPR001789 Signal transduction response regulator, receiver domain LJF99_09350 IPR013767 PAS fold LJF99_09350 IPR035965 PAS domain superfamily LJF99_09350 IPR000014 PAS domain LJF99_09350 IPR036641 HPT domain superfamily LJF99_09375 IPR005119 LysR, substrate-binding LJF99_09375 IPR036390 Winged helix DNA-binding domain superfamily LJF99_09375 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_09375 IPR000847 Transcription regulator HTH, LysR LJF99_09385 IPR028923 SAICAR synthetase/ADE2, N-terminal LJF99_09385 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type LJF99_09390 IPR014524 Outer membrane protein assembly factor BamC LJF99_09390 IPR042268 Outer membrane protein assembly factor BamC, C-terminal LJF99_09390 IPR010653 NlpB/DapX lipoprotein LJF99_09395 IPR020624 Schiff base-forming aldolase, conserved site LJF99_09395 IPR020625 Schiff base-forming aldolase, active site LJF99_09395 IPR002220 DapA-like LJF99_09395 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA LJF99_09395 IPR013785 Aldolase-type TIM barrel LJF99_09400 IPR002912 ACT domain LJF99_09400 IPR016867 Glycine cleavage system transcriptional repressor LJF99_09405 IPR013766 Thioredoxin domain LJF99_09405 IPR036249 Thioredoxin-like superfamily LJF99_09405 IPR024706 Peroxiredoxin, AhpC-type LJF99_09405 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LJF99_09410 IPR023146 YfbU, alpha-helical bundle domain superfamily LJF99_09410 IPR023145 YfbU, helix-hairpin domain superfamily LJF99_09410 IPR005587 Uncharacterised protein family UPF0304, YfbU LJF99_09415 IPR007334 Uncharacterised protein family UPF0208 LJF99_09420 IPR000890 Aliphatic acid kinase, short-chain LJF99_09420 IPR023865 Aliphatic acid kinase, short-chain, conserved site LJF99_09420 IPR004372 Acetate/propionate kinase LJF99_09425 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09425 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily LJF99_09425 IPR002505 Phosphate acetyl/butaryl transferase LJF99_09425 IPR004614 Phosphate acetyltransferase LJF99_09425 IPR042113 Phosphate acetyltransferase, domain 1 LJF99_09425 IPR042112 Phosphate acetyltransferase, domain 2 LJF99_09425 IPR010766 DRTGG LJF99_09425 IPR016475 Phosphate acetyltransferase, bacteria LJF99_09430 IPR004789 Acetolactate synthase, small subunit LJF99_09430 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal LJF99_09430 IPR019455 Acetolactate synthase, small subunit, C-terminal LJF99_09430 IPR002912 ACT domain LJF99_09430 IPR039557 AHAS, ACT domain LJF99_09435 IPR000399 TPP-binding enzyme, conserved site LJF99_09435 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LJF99_09435 IPR012000 Thiamine pyrophosphate enzyme, central domain LJF99_09435 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LJF99_09435 IPR029061 Thiamin diphosphate-binding fold LJF99_09435 IPR039368 Acetolactate synthase large subunit, TPP binding domain LJF99_09435 IPR012846 Acetolactate synthase, large subunit, biosynthetic LJF99_09435 IPR029035 DHS-like NAD/FAD-binding domain superfamily LJF99_09450 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LJF99_09450 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LJF99_09460 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain LJF99_09460 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site LJF99_09460 IPR013785 Aldolase-type TIM barrel LJF99_09460 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily LJF99_09460 IPR005671 2-isopropylmalate synthase, bacterial-type LJF99_09460 IPR000891 Pyruvate carboxyltransferase LJF99_09465 IPR004429 Isopropylmalate dehydrogenase LJF99_09465 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LJF99_09465 IPR024084 Isopropylmalate dehydrogenase-like domain LJF99_09470 IPR033941 3-Isopropylmalate dehydratase, catalytic domain LJF99_09470 IPR018136 Aconitase family, 4Fe-4S cluster binding site LJF99_09470 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LJF99_09470 IPR036008 Aconitase, iron-sulfur domain LJF99_09470 IPR004430 3-isopropylmalate dehydratase, large subunit LJF99_09470 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LJF99_09475 IPR004431 3-isopropylmalate dehydratase, small subunit LJF99_09475 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LJF99_09475 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain LJF99_09475 IPR033940 3-isopropylmalate dehydratase, swivel domain LJF99_09490 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter LJF99_09490 IPR006061 Solute-binding family 1, conserved site LJF99_09490 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria LJF99_09495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_09495 IPR035906 MetI-like superfamily LJF99_09495 IPR005947 Thiamine ABC transporter, permease protein LJF99_09500 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ LJF99_09500 IPR003593 AAA+ ATPase domain LJF99_09500 IPR003439 ABC transporter-like LJF99_09500 IPR017871 ABC transporter, conserved site LJF99_09500 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09505 IPR002716 PIN domain LJF99_09505 IPR029060 PIN-like domain superfamily LJF99_09505 IPR003714 PhoH-like protein LJF99_09505 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09515 IPR013346 Ribonucleotide reductase, class I , alpha subunit LJF99_09515 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE LJF99_09515 IPR000788 Ribonucleotide reductase large subunit, C-terminal LJF99_09515 IPR013509 Ribonucleotide reductase large subunit, N-terminal LJF99_09515 IPR013554 Ribonucleotide reductase N-terminal LJF99_09515 IPR039718 Ribonucleoside-diphosphate reductase large subunit LJF99_09515 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal LJF99_09545 IPR040765 RapA, N-terminal Tudor like domain 1 LJF99_09545 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09545 IPR023949 RNA polymerase-associated protein RapA LJF99_09545 IPR001650 Helicase, C-terminal LJF99_09545 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_09545 IPR038718 SNF2-like, N-terminal domain superfamily LJF99_09545 IPR022737 RNA polymerase recycling, bacterial, C-terminal LJF99_09545 IPR040766 RapA, N-terminal Tudor-like domain 2 LJF99_09545 IPR000330 SNF2-related, N-terminal domain LJF99_09550 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_09550 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_09550 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LJF99_09550 IPR006225 Pseudouridine synthase, RluC/RluD LJF99_09560 IPR029787 Nucleotide cyclase LJF99_09560 IPR005330 MHYT domain LJF99_09560 IPR000160 GGDEF domain LJF99_09560 IPR035919 EAL domain superfamily LJF99_09560 IPR035965 PAS domain superfamily LJF99_09560 IPR001633 EAL domain LJF99_09560 IPR000014 PAS domain LJF99_09570 IPR027410 TCP-1-like chaperonin intermediate domain superfamily LJF99_09570 IPR027409 GroEL-like apical domain superfamily LJF99_09570 IPR027413 GroEL-like equatorial domain superfamily LJF99_09570 IPR001844 Chaperonin Cpn60 LJF99_09570 IPR018370 Chaperonin Cpn60, conserved site LJF99_09570 IPR002423 Chaperonin Cpn60/TCP-1 family LJF99_09575 IPR020818 GroES chaperonin family LJF99_09575 IPR037124 GroES chaperonin superfamily LJF99_09575 IPR018369 Chaperonin GroES, conserved site LJF99_09575 IPR011032 GroES-like superfamily LJF99_09580 IPR002528 Multi antimicrobial extrusion protein LJF99_09585 IPR007313 FxsA cytoplasmic membrane protein LJF99_09590 IPR022761 Fumarate lyase, N-terminal LJF99_09590 IPR000362 Fumarate lyase family LJF99_09590 IPR008948 L-Aspartase-like LJF99_09590 IPR018951 Fumarase C, C-terminal LJF99_09590 IPR024083 Fumarase/histidase, N-terminal LJF99_09590 IPR004708 Aspartate ammonia-lyase LJF99_09590 IPR020557 Fumarate lyase, conserved site LJF99_09595 IPR004668 Anaerobic c4-dicarboxylate membrane transporter LJF99_09600 IPR023614 Porin domain superfamily LJF99_09600 IPR001897 Porin, gammaproteobacterial LJF99_09600 IPR001702 Porin, Gram-negative type LJF99_09600 IPR013793 Porin, Gram-negative type, conserved site LJF99_09605 IPR011701 Major facilitator superfamily LJF99_09605 IPR020846 Major facilitator superfamily domain LJF99_09605 IPR036259 MFS transporter superfamily LJF99_09605 IPR022855 Multidrug resistance protein MdtH LJF99_09610 IPR036390 Winged helix DNA-binding domain superfamily LJF99_09610 IPR000847 Transcription regulator HTH, LysR LJF99_09610 IPR005119 LysR, substrate-binding LJF99_09610 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_09620 IPR016181 Acyl-CoA N-acyltransferase LJF99_09620 IPR000182 GNAT domain LJF99_09625 IPR016181 Acyl-CoA N-acyltransferase LJF99_09625 IPR000182 GNAT domain LJF99_09645 IPR011701 Major facilitator superfamily LJF99_09645 IPR020846 Major facilitator superfamily domain LJF99_09645 IPR036259 MFS transporter superfamily LJF99_09645 IPR023697 Multidrug resistance protein MdtL LJF99_09650 IPR020922 dITP/XTP pyrophosphatase LJF99_09650 IPR002637 Ham1-like protein LJF99_09650 IPR029001 Inosine triphosphate pyrophosphatase-like LJF99_09655 IPR023404 Radical SAM, alpha/beta horseshoe LJF99_09655 IPR034505 Anaerobic coproporphyrinogen-III oxidase LJF99_09655 IPR006638 Elp3/MiaB/NifB LJF99_09655 IPR010723 HemN, C-terminal LJF99_09655 IPR004559 Heme chaperone HemW-like LJF99_09655 IPR007197 Radical SAM LJF99_09660 IPR005589 Alternative ribosome-rescue factor A LJF99_09665 IPR024072 Dihydrofolate reductase-like domain superfamily LJF99_09665 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal LJF99_09670 IPR009061 Putative DNA-binding domain superfamily LJF99_09670 IPR000551 MerR-type HTH domain LJF99_09670 IPR011794 Hg(II)-responsive transcriptional regulator LJF99_09675 IPR002695 Bifunctional purine biosynthesis protein PurH-like LJF99_09675 IPR036914 Methylglyoxal synthase-like domain superfamily LJF99_09675 IPR011607 Methylglyoxal synthase-like domain LJF99_09675 IPR016193 Cytidine deaminase-like LJF99_09675 IPR024051 AICAR transformylase, duplicated domain superfamily LJF99_09680 IPR011054 Rudiment single hybrid motif LJF99_09680 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal LJF99_09680 IPR013815 ATP-grasp fold, subdomain 1 LJF99_09680 IPR020559 Phosphoribosylglycinamide synthetase, conserved site LJF99_09680 IPR016185 Pre-ATP-grasp domain superfamily LJF99_09680 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LJF99_09680 IPR000115 Phosphoribosylglycinamide synthetase LJF99_09680 IPR020560 Phosphoribosylglycinamide synthetase, C-domain LJF99_09680 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily LJF99_09680 IPR011761 ATP-grasp fold LJF99_09695 IPR013780 Glycosyl hydrolase, all-beta LJF99_09695 IPR017853 Glycoside hydrolase superfamily LJF99_09695 IPR006046 Alpha amylase LJF99_09695 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_09710 IPR009057 Homeobox-like domain superfamily LJF99_09710 IPR012337 Ribonuclease H-like superfamily LJF99_09710 IPR038717 Tc1-like transposase, DDE domain LJF99_09710 IPR025959 Winged helix-turn helix domain LJF99_09720 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_09720 IPR028630 RNA polymerase sigma factor RpoD LJF99_09720 IPR012760 RNA polymerase sigma factor RpoD, C-terminal LJF99_09720 IPR042189 Sigma-70 factor, region 1.1 superfamily LJF99_09720 IPR013324 RNA polymerase sigma factor, region 3/4-like LJF99_09720 IPR013325 RNA polymerase sigma factor, region 2 LJF99_09720 IPR007127 RNA polymerase sigma factor 70, region 1.1 LJF99_09720 IPR007631 RNA polymerase sigma factor 70, non-essential domain LJF99_09720 IPR007630 RNA polymerase sigma-70 region 4 LJF99_09720 IPR007624 RNA polymerase sigma-70 region 3 LJF99_09720 IPR007627 RNA polymerase sigma-70 region 2 LJF99_09720 IPR014284 RNA polymerase sigma-70 like domain LJF99_09720 IPR000943 RNA polymerase sigma-70 LJF99_09720 IPR009042 RNA polymerase sigma-70 region 1.2 LJF99_09725 IPR006295 DNA primase, DnaG LJF99_09725 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily LJF99_09725 IPR019475 DNA primase, DnaB-helicase binding domain LJF99_09725 IPR013173 DNA primase DnaG, DnaB-binding domain LJF99_09725 IPR036977 DNA Primase, CHC2-type zinc finger LJF99_09725 IPR030846 DNA primase DnaG, bacteria LJF99_09725 IPR034151 Bacterial DnaG primase, TOPRIM domain LJF99_09725 IPR006171 TOPRIM domain LJF99_09725 IPR002694 Zinc finger, CHC2-type LJF99_09725 IPR013264 DNA primase, catalytic core, N-terminal LJF99_09725 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LJF99_09730 IPR042184 YqeY/Aim41, N-terminal domain LJF99_09730 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 LJF99_09730 IPR019004 Uncharacterised protein YqeY/Aim41 LJF99_09730 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like LJF99_09735 IPR001911 Ribosomal protein S21 LJF99_09735 IPR018278 Ribosomal protein S21, conserved site LJF99_09735 IPR038380 Ribosomal protein S21 superfamily LJF99_09740 IPR017860 Peptidase M22, conserved site LJF99_09740 IPR017861 Kae1/TsaD family LJF99_09740 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD LJF99_09740 IPR000905 Gcp-like domain LJF99_09745 IPR014284 RNA polymerase sigma-70 like domain LJF99_09745 IPR000943 RNA polymerase sigma-70 LJF99_09745 IPR009042 RNA polymerase sigma-70 region 1.2 LJF99_09745 IPR007627 RNA polymerase sigma-70 region 2 LJF99_09745 IPR007624 RNA polymerase sigma-70 region 3 LJF99_09745 IPR007630 RNA polymerase sigma-70 region 4 LJF99_09745 IPR013325 RNA polymerase sigma factor, region 2 LJF99_09745 IPR013324 RNA polymerase sigma factor, region 3/4-like LJF99_09745 IPR012761 RNA polymerase sigma factor RpoS LJF99_09745 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_09750 IPR011055 Duplicated hybrid motif LJF99_09750 IPR018392 LysM domain LJF99_09750 IPR016047 Peptidase M23 LJF99_09750 IPR036779 LysM domain superfamily LJF99_09755 IPR032816 SNARE associated Golgi protein LJF99_09760 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase LJF99_09760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_09765 IPR036523 SurE-like phosphatase/nucleotidase superfamily LJF99_09765 IPR002828 Survival protein SurE-like phosphatase/nucleotidase LJF99_09765 IPR030048 Survival protein SurE LJF99_09770 IPR042214 Pseudouridine synthase, TruD, catalytic domain LJF99_09770 IPR011760 Pseudouridine synthase, TruD, insertion domain LJF99_09770 IPR020119 Pseudouridine synthase TruD, conserved site LJF99_09770 IPR001656 Pseudouridine synthase, TruD LJF99_09770 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_09775 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily LJF99_09775 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site LJF99_09775 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase LJF99_09780 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_09780 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LJF99_09780 IPR034683 Cytidylyltransferase IspD/TarI LJF99_09780 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site LJF99_09785 IPR023081 Cell division protein FtsB LJF99_09785 IPR007060 Septum formation initiator FtsL/DivIC LJF99_09790 IPR000941 Enolase LJF99_09790 IPR036849 Enolase-like, C-terminal domain superfamily LJF99_09790 IPR029017 Enolase-like, N-terminal LJF99_09790 IPR020810 Enolase, C-terminal TIM barrel domain LJF99_09790 IPR020809 Enolase, conserved site LJF99_09790 IPR020811 Enolase, N-terminal LJF99_09795 IPR029062 Class I glutamine amidotransferase-like LJF99_09795 IPR004468 CTP synthase LJF99_09795 IPR017456 CTP synthase, N-terminal LJF99_09795 IPR017926 Glutamine amidotransferase LJF99_09795 IPR033828 CTP synthase GATase domain LJF99_09795 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09800 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LJF99_09800 IPR011551 NTP pyrophosphohydrolase MazG LJF99_09805 IPR012676 TGS-like LJF99_09805 IPR004095 TGS LJF99_09805 IPR007685 RelA/SpoT LJF99_09805 IPR004811 RelA/SpoT family LJF99_09805 IPR012675 Beta-grasp domain superfamily LJF99_09805 IPR002912 ACT domain LJF99_09805 IPR003607 HD/PDEase domain LJF99_09805 IPR033655 RelA, TGS domain LJF99_09810 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD LJF99_09810 IPR030390 RNA methyltransferase TrmA, active site LJF99_09810 IPR030391 RNA methyltransferase TrmA, conserved site LJF99_09810 IPR012340 Nucleic acid-binding, OB-fold LJF99_09810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_09810 IPR002792 TRAM domain LJF99_09810 IPR010280 (Uracil-5)-methyltransferase family LJF99_09815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_09815 IPR001789 Signal transduction response regulator, receiver domain LJF99_09815 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_09815 IPR003660 HAMP domain LJF99_09815 IPR011006 CheY-like superfamily LJF99_09815 IPR005467 Histidine kinase domain LJF99_09815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_09815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_09815 IPR019247 Histidine kinase BarA, N-terminal LJF99_09815 IPR036641 HPT domain superfamily LJF99_09815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_09815 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_09820 IPR009921 Domain of unknown function DUF1456 LJF99_09825 IPR036365 PGBD-like superfamily LJF99_09825 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LJF99_09825 IPR036366 PGBD superfamily LJF99_09825 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LJF99_09830 IPR013785 Aldolase-type TIM barrel LJF99_09830 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ LJF99_09830 IPR036130 Pyridoxine 5'-phosphate synthase LJF99_09835 IPR022572 DNA replication/recombination mediator RecO, N-terminal LJF99_09835 IPR037278 ARFGAP/RecO-like zinc finger LJF99_09835 IPR012340 Nucleic acid-binding, OB-fold LJF99_09835 IPR003717 Recombination protein O, RecO LJF99_09840 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09840 IPR030388 Era-type guanine nucleotide-binding (G) domain LJF99_09840 IPR005225 Small GTP-binding protein domain LJF99_09840 IPR009019 K homology domain superfamily, prokaryotic type LJF99_09840 IPR005662 GTP-binding protein Era LJF99_09840 IPR006073 GTP binding domain LJF99_09840 IPR004044 K Homology domain, type 2 LJF99_09840 IPR015946 K homology domain-like, alpha/beta LJF99_09845 IPR014720 Double-stranded RNA-binding domain LJF99_09845 IPR011907 Ribonuclease III LJF99_09845 IPR000999 Ribonuclease III domain LJF99_09845 IPR036389 Ribonuclease III, endonuclease domain superfamily LJF99_09850 IPR019757 Peptidase S26A, signal peptidase I, lysine active site LJF99_09850 IPR019756 Peptidase S26A, signal peptidase I, serine active site LJF99_09850 IPR019758 Peptidase S26A, signal peptidase I, conserved site LJF99_09850 IPR000223 Peptidase S26A, signal peptidase I LJF99_09850 IPR019533 Peptidase S26 LJF99_09850 IPR036286 LexA/Signal peptidase-like superfamily LJF99_09855 IPR013842 GTP-binding protein LepA, C-terminal LJF99_09855 IPR005225 Small GTP-binding protein domain LJF99_09855 IPR000795 Transcription factor, GTP-binding domain LJF99_09855 IPR035654 Elongation factor 4, domain IV LJF99_09855 IPR038363 LepA, C-terminal domain superfamily LJF99_09855 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09855 IPR004161 Translation elongation factor EFTu-like, domain 2 LJF99_09855 IPR000640 Elongation factor EFG, domain V-like LJF99_09855 IPR035647 EF-G domain III/V-like LJF99_09855 IPR006297 Elongation factor 4 LJF99_09855 IPR031157 Tr-type G domain, conserved site LJF99_09865 IPR038484 MucB/RseB, C-terminal domain superfamily LJF99_09865 IPR033436 MucB/RseB, C-terminal LJF99_09865 IPR033434 MucB/RseB, N-terminal LJF99_09865 IPR005588 MucB/RseB LJF99_09870 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily LJF99_09870 IPR005572 Anti sigma-E protein RseA, N-terminal LJF99_09870 IPR026279 Sigma-E factor negative regulatory protein RseA LJF99_09870 IPR005573 Anti sigma-E protein RseA, C-terminal LJF99_09875 IPR039425 RNA polymerase sigma-70 like LJF99_09875 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LJF99_09875 IPR007627 RNA polymerase sigma-70 region 2 LJF99_09875 IPR014286 RNA polymerase sigma-70 RpoE type LJF99_09875 IPR013325 RNA polymerase sigma factor, region 2 LJF99_09875 IPR013324 RNA polymerase sigma factor, region 3/4-like LJF99_09875 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_09875 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LJF99_09875 IPR014284 RNA polymerase sigma-70 like domain LJF99_09880 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LJF99_09880 IPR005288 L-aspartate oxidase LJF99_09880 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_09880 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LJF99_09880 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LJF99_09880 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LJF99_09890 IPR036714 Flavinator of succinate dehydrogenase superfamily LJF99_09890 IPR005631 Flavinator of succinate dehydrogenase LJF99_09895 IPR006222 Aminomethyltransferase, folate-binding domain LJF99_09895 IPR023758 tRNA-modifying protein YgfZ LJF99_09895 IPR017703 YgfZ/GcvT conserved site LJF99_09895 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal LJF99_09915 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LJF99_09915 IPR011322 Nitrogen regulatory PII-like, alpha/beta LJF99_09915 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria LJF99_09915 IPR004323 Divalent ion tolerance protein, CutA LJF99_09920 IPR036249 Thioredoxin-like superfamily LJF99_09920 IPR022910 Thiol:disulphide interchange protein DsbD LJF99_09920 IPR013766 Thioredoxin domain LJF99_09920 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily LJF99_09920 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LJF99_09920 IPR035671 DsbD gamma LJF99_09920 IPR003834 Cytochrome C biogenesis protein, transmembrane domain LJF99_09920 IPR017937 Thioredoxin, conserved site LJF99_09930 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_09930 IPR006076 FAD dependent oxidoreductase LJF99_09935 IPR013785 Aldolase-type TIM barrel LJF99_09935 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype LJF99_09935 IPR000771 Fructose-bisphosphate aldolase, class-II LJF99_09940 IPR001576 Phosphoglycerate kinase LJF99_09940 IPR015911 Phosphoglycerate kinase, conserved site LJF99_09940 IPR015824 Phosphoglycerate kinase, N-terminal LJF99_09940 IPR036043 Phosphoglycerate kinase superfamily LJF99_09945 IPR006422 D-erythrose-4-phosphate dehydrogenase LJF99_09945 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LJF99_09945 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LJF99_09945 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LJF99_09945 IPR036291 NAD(P)-binding domain superfamily LJF99_09950 IPR000600 ROK family LJF99_09965 IPR006513 Conserved hypothetical protein CHP01626, YtfJ LJF99_09980 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_09980 IPR011924 Lipoprotein releasing system, ATP-binding protein LJF99_09980 IPR003593 AAA+ ATPase domain LJF99_09980 IPR017871 ABC transporter, conserved site LJF99_09980 IPR003439 ABC transporter-like LJF99_09980 IPR015854 ABC transporter, lipoprotein release, LolD LJF99_10000 IPR000014 PAS domain LJF99_10000 IPR001610 PAC motif LJF99_10000 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_10000 IPR003660 HAMP domain LJF99_10000 IPR004090 Chemotaxis methyl-accepting receptor LJF99_10000 IPR035965 PAS domain superfamily LJF99_10000 IPR013655 PAS fold-3 LJF99_10005 IPR025959 Winged helix-turn helix domain LJF99_10005 IPR038717 Tc1-like transposase, DDE domain LJF99_10005 IPR012337 Ribonuclease H-like superfamily LJF99_10005 IPR009057 Homeobox-like domain superfamily LJF99_10015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10015 IPR002891 Adenylyl-sulfate kinase LJF99_10020 IPR006037 Regulator of K+ conductance, C-terminal LJF99_10020 IPR031312 Sodium/sulphate symporter, conserved site LJF99_10020 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_10020 IPR004680 Citrate transporter-like domain LJF99_10025 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain LJF99_10025 IPR031157 Tr-type G domain, conserved site LJF99_10025 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10025 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LJF99_10025 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_10025 IPR000795 Transcription factor, GTP-binding domain LJF99_10025 IPR011779 Sulphate adenylyltransferase, large subunit LJF99_10025 IPR005225 Small GTP-binding protein domain LJF99_10030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_10030 IPR002500 Phosphoadenosine phosphosulphate reductase LJF99_10030 IPR011784 Sulphate adenylyltransferase, small subunit LJF99_10035 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site LJF99_10035 IPR006367 Sirohaem synthase, N-terminal LJF99_10035 IPR019478 Sirohaem synthase, dimerisation domain LJF99_10035 IPR014776 Tetrapyrrole methylase, subdomain 2 LJF99_10035 IPR006366 Uroporphyrin-III C-methyltransferase LJF99_10035 IPR036291 NAD(P)-binding domain superfamily LJF99_10035 IPR028281 Siroheme synthase, central domain LJF99_10035 IPR037115 Sirohaem synthase, dimerisation domain superfamily LJF99_10035 IPR012409 Sirohaem synthase LJF99_10035 IPR014777 Tetrapyrrole methylase, subdomain 1 LJF99_10035 IPR035996 Tetrapyrrole methylase superfamily LJF99_10035 IPR000878 Tetrapyrrole methylase LJF99_10040 IPR001972 Stomatin family LJF99_10040 IPR032435 Band 7, C-terminal extension LJF99_10040 IPR018080 Band 7/stomatin-like, conserved site LJF99_10040 IPR036013 Band 7/SPFH domain superfamily LJF99_10040 IPR001107 Band 7 domain LJF99_10045 IPR002810 NfeD-like, C-terminal domain LJF99_10050 IPR001347 Sugar isomerase (SIS) LJF99_10050 IPR035474 KpsF-like, SIS domain LJF99_10050 IPR000644 CBS domain LJF99_10050 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type LJF99_10055 IPR003439 ABC transporter-like LJF99_10055 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10055 IPR017871 ABC transporter, conserved site LJF99_10055 IPR032781 ABC-transporter extension domain LJF99_10055 IPR003593 AAA+ ATPase domain LJF99_10065 IPR007473 Ribosomal RNA large subunit methyltransferase J LJF99_10065 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_10065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_10125 IPR009057 Homeobox-like domain superfamily LJF99_10125 IPR025959 Winged helix-turn helix domain LJF99_10125 IPR038717 Tc1-like transposase, DDE domain LJF99_10125 IPR012337 Ribonuclease H-like superfamily LJF99_10135 IPR000551 MerR-type HTH domain LJF99_10135 IPR009061 Putative DNA-binding domain superfamily LJF99_10135 IPR011789 Cu(I)-responsive transcriptional regulator LJF99_10145 IPR018212 Sodium/solute symporter, conserved site LJF99_10145 IPR001734 Sodium/solute symporter LJF99_10145 IPR011851 Sodium/proline symporter LJF99_10145 IPR038377 Sodium/glucose symporter superfamily LJF99_10150 IPR041597 L,D-transpeptidase C-terminal domain LJF99_10150 IPR005490 L,D-transpeptidase catalytic domain LJF99_10150 IPR038063 L,D-transpeptidase catalytic domain-like LJF99_10155 IPR011066 Mechanosensitive ion channel MscS, C-terminal LJF99_10155 IPR030192 Miniconductance mechanosensitive channel YbdG LJF99_10155 IPR006685 Mechanosensitive ion channel MscS LJF99_10155 IPR010920 LSM domain superfamily LJF99_10160 IPR023865 Aliphatic acid kinase, short-chain, conserved site LJF99_10160 IPR004372 Acetate/propionate kinase LJF99_10160 IPR000890 Aliphatic acid kinase, short-chain LJF99_10165 IPR004375 YhcH/YjgK/YiaL family LJF99_10165 IPR037012 YhcH/YjgK/YiaL superfamily LJF99_10175 IPR033134 Asp/Glu racemase, active site 2 LJF99_10175 IPR015942 Asp/Glu/hydantoin racemase LJF99_10175 IPR001920 Asp/Glu racemase LJF99_10175 IPR018187 Asp/Glu racemase, active site 1 LJF99_10175 IPR004380 Aspartate racemase LJF99_10180 IPR001123 Amino acid exporter protein, LeuE-type LJF99_10215 IPR037272 Sodium:neurotransmitter symporter superfamily LJF99_10215 IPR000175 Sodium:neurotransmitter symporter LJF99_10225 IPR037272 Sodium:neurotransmitter symporter superfamily LJF99_10225 IPR000175 Sodium:neurotransmitter symporter LJF99_10240 IPR023214 HAD superfamily LJF99_10240 IPR006379 HAD-superfamily hydrolase, subfamily IIB LJF99_10240 IPR036412 HAD-like superfamily LJF99_10240 IPR000150 Cof family LJF99_10245 IPR020846 Major facilitator superfamily domain LJF99_10245 IPR011701 Major facilitator superfamily LJF99_10245 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LJF99_10245 IPR036259 MFS transporter superfamily LJF99_10245 IPR005829 Sugar transporter, conserved site LJF99_10260 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LJF99_10260 IPR000485 AsnC-type HTH domain LJF99_10260 IPR019888 Transcription regulator AsnC-type LJF99_10260 IPR011008 Dimeric alpha-beta barrel LJF99_10260 IPR011991 ArsR-like helix-turn-helix domain LJF99_10260 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_10260 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LJF99_10260 IPR036390 Winged helix DNA-binding domain superfamily LJF99_10275 IPR000835 MarR-type HTH domain LJF99_10275 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_10275 IPR036390 Winged helix DNA-binding domain superfamily LJF99_10280 IPR015946 K homology domain-like, alpha/beta LJF99_10280 IPR019953 Organic hydroperoxide resistance protein famiy LJF99_10280 IPR003718 OsmC/Ohr family LJF99_10280 IPR036102 OsmC/Ohr superfamily LJF99_10285 IPR041694 Oxidoreductase, N-terminal domain LJF99_10285 IPR011032 GroES-like superfamily LJF99_10285 IPR036291 NAD(P)-binding domain superfamily LJF99_10285 IPR020843 Polyketide synthase, enoylreductase domain LJF99_10285 IPR013149 Alcohol dehydrogenase, C-terminal LJF99_10290 IPR020476 NUDIX hydrolase LJF99_10290 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_10290 IPR020084 NUDIX hydrolase, conserved site LJF99_10290 IPR000086 NUDIX hydrolase domain LJF99_10290 IPR022927 RNA pyrophosphohydrolase RppH LJF99_10305 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme LJF99_10305 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain LJF99_10305 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase LJF99_10310 IPR036390 Winged helix DNA-binding domain superfamily LJF99_10310 IPR014036 DeoR C-terminal sensor domain LJF99_10310 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LJF99_10310 IPR037171 NagB/RpiA transferase-like LJF99_10310 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_10310 IPR001034 DeoR-type HTH domain LJF99_10320 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_10320 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_10320 IPR036291 NAD(P)-binding domain superfamily LJF99_10325 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup LJF99_10325 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily LJF99_10325 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component LJF99_10330 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II LJF99_10330 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal LJF99_10330 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal LJF99_10335 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor LJF99_10340 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase LJF99_10340 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain LJF99_10340 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme LJF99_10360 IPR007844 AsmA LJF99_10365 IPR029058 Alpha/Beta hydrolase fold LJF99_10365 IPR002471 Peptidase S9, serine active site LJF99_10365 IPR023302 Peptidase S9A, N-terminal domain LJF99_10365 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain LJF99_10365 IPR002470 Peptidase S9A, prolyl oligopeptidase LJF99_10370 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10370 IPR025857 MacB-like periplasmic core domain LJF99_10370 IPR017911 ABC transporter, macrolide export, ATP-binding domain LJF99_10370 IPR017871 ABC transporter, conserved site LJF99_10370 IPR003838 ABC transporter permease protein domain LJF99_10370 IPR003439 ABC transporter-like LJF99_10370 IPR003593 AAA+ ATPase domain LJF99_10375 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_10375 IPR030190 Macrolide export protein MacA LJF99_10375 IPR006143 RND efflux pump, membrane fusion protein LJF99_10380 IPR011006 CheY-like superfamily LJF99_10380 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_10380 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_10380 IPR001789 Signal transduction response regulator, receiver domain LJF99_10380 IPR039420 Transcriptional regulatory protein WalR-like LJF99_10380 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_10385 IPR005467 Histidine kinase domain LJF99_10385 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_10385 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_10385 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_10385 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_10385 IPR003660 HAMP domain LJF99_10385 IPR038515 CpxA, periplasmic domain superfamily LJF99_10385 IPR032404 Two-component sensor protein CpxA, periplasmic domain LJF99_10385 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_10390 IPR015376 Zinc ribbon, NADH pyrophosphatase LJF99_10390 IPR020084 NUDIX hydrolase, conserved site LJF99_10390 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_10390 IPR000086 NUDIX hydrolase domain LJF99_10390 IPR015375 NADH pyrophosphatase-like, N-terminal LJF99_10390 IPR022925 NADH pyrophosphatase NudC LJF99_10425 IPR013785 Aldolase-type TIM barrel LJF99_10425 IPR004136 Nitronate monooxygenase LJF99_10435 IPR001568 Ribonuclease T2-like LJF99_10435 IPR036430 Ribonuclease T2-like superfamily LJF99_10435 IPR033130 Ribonuclease T2, His active site 2 LJF99_10435 IPR018188 Ribonuclease T2, His active site 1 LJF99_10455 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal LJF99_10455 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal LJF99_10455 IPR002747 SAM-dependent chlorinase/fluorinase LJF99_10470 IPR036390 Winged helix DNA-binding domain superfamily LJF99_10470 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_10470 IPR000847 Transcription regulator HTH, LysR LJF99_10470 IPR005119 LysR, substrate-binding LJF99_10475 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_10475 IPR001650 Helicase, C-terminal LJF99_10475 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10475 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_10475 IPR028622 ATP-dependent RNA helicase RhlE LJF99_10475 IPR011545 DEAD/DEAH box helicase domain LJF99_10475 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_10485 IPR001018 Beta-lactamase, class-B, conserved site LJF99_10485 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LJF99_10485 IPR001279 Metallo-beta-lactamase LJF99_10495 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit LJF99_10495 IPR036928 Amidase signature (AS) superfamily LJF99_10495 IPR023631 Amidase signature domain LJF99_10495 IPR020556 Amidase, conserved site LJF99_10495 IPR000120 Amidase LJF99_10500 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type LJF99_10500 IPR017754 Agmatine deiminase LJF99_10505 IPR000847 Transcription regulator HTH, LysR LJF99_10505 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_10505 IPR005119 LysR, substrate-binding LJF99_10505 IPR036390 Winged helix DNA-binding domain superfamily LJF99_10510 IPR036291 NAD(P)-binding domain superfamily LJF99_10510 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_10525 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LJF99_10525 IPR029045 ClpP/crotonase-like domain superfamily LJF99_10525 IPR001753 Enoyl-CoA hydratase/isomerase LJF99_10530 IPR020206 Uncharacterised protein family, VP2110 LJF99_10535 IPR011004 Trimeric LpxA-like superfamily LJF99_10535 IPR001451 Hexapeptide repeat LJF99_10535 IPR018357 Hexapeptide transferase, conserved site LJF99_10545 IPR039424 Solute-binding protein family 5 LJF99_10545 IPR023765 Solute-binding protein family 5, conserved site LJF99_10545 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_10545 IPR000914 Solute-binding protein family 5 domain LJF99_10560 IPR036591 YggU-like superfamily LJF99_10560 IPR003746 Protein of unknown function DUF167 LJF99_10560 IPR005228 Conserved hypothetical protein CHP00251 LJF99_10565 IPR003425 CCB3/YggT LJF99_10570 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_10570 IPR036291 NAD(P)-binding domain superfamily LJF99_10570 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LJF99_10570 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain LJF99_10570 IPR000304 Pyrroline-5-carboxylate reductase LJF99_10575 IPR001608 Alanine racemase, N-terminal LJF99_10575 IPR029066 PLP-binding barrel LJF99_10575 IPR011078 Pyridoxal phosphate homeostasis protein LJF99_10580 IPR001482 Type II/IV secretion system protein LJF99_10580 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10580 IPR003593 AAA+ ATPase domain LJF99_10580 IPR006321 Pilus retraction protein PilT LJF99_10585 IPR001482 Type II/IV secretion system protein LJF99_10585 IPR006321 Pilus retraction protein PilT LJF99_10585 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10590 IPR005583 Peroxide stress protein YaaA LJF99_10595 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_10595 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_10595 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10595 IPR001650 Helicase, C-terminal LJF99_10595 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_10595 IPR028621 ATP-dependent RNA helicase SrmB LJF99_10595 IPR011545 DEAD/DEAH box helicase domain LJF99_10600 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase LJF99_10600 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_10600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_10600 IPR007848 Methyltransferase small domain LJF99_10605 IPR004685 Branched-chain amino acid transport system II carrier protein LJF99_10620 IPR002481 Ferric-uptake regulator LJF99_10620 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_10620 IPR036390 Winged helix DNA-binding domain superfamily LJF99_10625 IPR001269 tRNA-dihydrouridine synthase LJF99_10625 IPR018517 tRNA-dihydrouridine synthase, conserved site LJF99_10625 IPR035587 DUS-like, FMN-binding domain LJF99_10625 IPR004653 tRNA-dihydrouridine(20/20a) synthase LJF99_10625 IPR013785 Aldolase-type TIM barrel LJF99_10640 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LJF99_10640 IPR000119 Histone-like DNA-binding protein LJF99_10640 IPR020816 Histone-like DNA-binding protein, conserved site LJF99_10645 IPR038309 Rsd/AlgQ superfamily LJF99_10645 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd LJF99_10645 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LJF99_10650 IPR009875 PilZ domain LJF99_10650 IPR027021 Cyclic di-GMP binding protein, PA4608 type LJF99_10655 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_10655 IPR003593 AAA+ ATPase domain LJF99_10655 IPR004504 DNA repair protein RadA LJF99_10655 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10655 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain LJF99_10655 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_10655 IPR041166 LapB, rubredoxin metal binding domain LJF99_10670 IPR041449 Phosphoserine phosphatase, N-terminal LJF99_10670 IPR023190 Phosphoserine phosphatase, domain 2 LJF99_10670 IPR023214 HAD superfamily LJF99_10670 IPR036412 HAD-like superfamily LJF99_10680 IPR004402 Purine nucleoside phosphorylase DeoD-type LJF99_10680 IPR035994 Nucleoside phosphorylase superfamily LJF99_10680 IPR018016 Nucleoside phosphorylase, conserved site LJF99_10680 IPR000845 Nucleoside phosphorylase domain LJF99_10685 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_10685 IPR010045 Phosphopentomutase LJF99_10685 IPR006124 Metalloenzyme LJF99_10685 IPR024052 Phosphopentomutase DeoB cap domain superfamily LJF99_10690 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase LJF99_10690 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site LJF99_10690 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal LJF99_10690 IPR013465 Thymidine phosphorylase LJF99_10690 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LJF99_10690 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily LJF99_10690 IPR000312 Glycosyl transferase, family 3 LJF99_10690 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic LJF99_10690 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LJF99_10690 IPR017459 Glycosyl transferase family 3, N-terminal domain LJF99_10695 IPR013785 Aldolase-type TIM barrel LJF99_10695 IPR011343 Deoxyribose-phosphate aldolase LJF99_10695 IPR002915 DeoC/FbaB/ lacD aldolase LJF99_10695 IPR023649 Deoxyribose-phosphate aldolase type II LJF99_10705 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LJF99_10705 IPR011657 Concentrative nucleoside transporter C-terminal domain LJF99_10705 IPR002668 Concentrative nucleoside transporter N-terminal domain LJF99_10705 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LJF99_10705 IPR008276 Concentrative nucleoside transporter LJF99_10710 IPR018228 Deoxyribonuclease, TatD-related, conserved site LJF99_10710 IPR032466 Metal-dependent hydrolase LJF99_10710 IPR001130 TatD family LJF99_10715 IPR012902 Prokaryotic N-terminal methylation site LJF99_10725 IPR000182 GNAT domain LJF99_10725 IPR016181 Acyl-CoA N-acyltransferase LJF99_10730 IPR030390 RNA methyltransferase TrmA, active site LJF99_10730 IPR010280 (Uracil-5)-methyltransferase family LJF99_10730 IPR002792 TRAM domain LJF99_10730 IPR012340 Nucleic acid-binding, OB-fold LJF99_10730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_10730 IPR030391 RNA methyltransferase TrmA, conserved site LJF99_10735 IPR029020 Ammonium/urea transporter LJF99_10735 IPR001905 Ammonium transporter LJF99_10735 IPR018047 Ammonium transporter, conserved site LJF99_10735 IPR024041 Ammonium transporter AmtB-like domain LJF99_10740 IPR026287 Protein adenylyltransferase SoFic-like LJF99_10740 IPR025758 Fic/DOC N-terminal LJF99_10740 IPR003812 Fido domain LJF99_10740 IPR036597 Fido-like domain superfamily LJF99_10740 IPR040198 Fido domain-containing protein LJF99_10765 IPR006171 TOPRIM domain LJF99_10765 IPR041459 Polyvalent protein, metallopeptidase domain LJF99_10765 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain LJF99_10765 IPR013610 Domain of unknown function DUF1738 LJF99_10785 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal LJF99_10785 IPR013557 AntA/AntB antirepressor LJF99_10800 IPR009057 Homeobox-like domain superfamily LJF99_10800 IPR038717 Tc1-like transposase, DDE domain LJF99_10800 IPR025959 Winged helix-turn helix domain LJF99_10800 IPR012337 Ribonuclease H-like superfamily LJF99_10805 IPR003423 Outer membrane efflux protein LJF99_10805 IPR010130 Type I secretion outer membrane protein, TolC LJF99_10810 IPR023030 Bifunctional protein HldE LJF99_10810 IPR004821 Cytidyltransferase-like domain LJF99_10810 IPR011611 Carbohydrate kinase PfkB LJF99_10810 IPR011913 RfaE bifunctional protein, domain I LJF99_10810 IPR011914 RfaE bifunctional protein, domain II LJF99_10810 IPR029056 Ribokinase-like LJF99_10810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_10810 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LJF99_10815 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase LJF99_10815 IPR004960 Bacterial lipid A biosynthesis acyltransferase LJF99_10830 IPR018445 Putative phosphate transport regulator LJF99_10830 IPR038078 PhoU-like domain superfamily LJF99_10830 IPR002727 Protein of unknown function DUF47 LJF99_10835 IPR001204 Phosphate transporter LJF99_10840 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LJF99_10840 IPR003607 HD/PDEase domain LJF99_10840 IPR012006 tRNA nucleotidyltransferase, proteobacteria LJF99_10840 IPR006674 HD domain LJF99_10840 IPR002646 Poly A polymerase, head domain LJF99_10845 IPR036366 PGBD superfamily LJF99_10845 IPR002477 Peptidoglycan binding-like LJF99_10845 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_10845 IPR003593 AAA+ ATPase domain LJF99_10845 IPR036365 PGBD-like superfamily LJF99_10850 IPR032389 Type II secretion system protein B LJF99_10855 IPR011257 DNA glycosylase LJF99_10855 IPR004036 Endonuclease III-like, conserved site-2 LJF99_10855 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif LJF99_10855 IPR004035 Endonuclease III, iron-sulphur binding site LJF99_10855 IPR003265 HhH-GPD domain LJF99_10855 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LJF99_10855 IPR029119 MutY, C-terminal LJF99_10855 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_10855 IPR005760 A/G-specific adenine glycosylase MutY LJF99_10855 IPR000445 Helix-hairpin-helix motif LJF99_10860 IPR036766 Fe(II) trafficking protein YggX superfamily LJF99_10860 IPR007457 Fe(II) trafficking protein YggX LJF99_10865 IPR000189 Prokaryotic transglycosylase, active site LJF99_10865 IPR024570 Murein transglycosylase-C, N-terminal LJF99_10865 IPR023664 Murein transglycosylase-C LJF99_10865 IPR023346 Lysozyme-like domain superfamily LJF99_10865 IPR008258 Transglycosylase SLT domain 1 LJF99_10870 IPR036700 Bacterial OB-fold superfamily LJF99_10870 IPR005220 Bacterial OB-fold LJF99_10870 IPR016052 Bacteriophage 933W, L0136 LJF99_10875 IPR001087 GDSL lipase/esterase LJF99_10875 IPR036514 SGNH hydrolase superfamily LJF99_10875 IPR008265 Lipase, GDSL, active site LJF99_10885 IPR036737 OmpA-like domain superfamily LJF99_10885 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_10885 IPR006665 OmpA-like domain LJF99_10885 IPR002368 Outer membrane protein, OmpA LJF99_10885 IPR006664 Outer membrane protein, bacterial LJF99_10885 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LJF99_10885 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LJF99_10890 IPR005586 ABC-type transport auxiliary lipoprotein component LJF99_10895 IPR003399 Mce/MlaD LJF99_10900 IPR007498 Intermembrane transport protein PqiA-like LJF99_10900 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type LJF99_10905 IPR005001 RNA-binding protein Hfq LJF99_10905 IPR010920 LSM domain superfamily LJF99_10910 IPR010976 Beta-phosphoglucomutase hydrolase LJF99_10910 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_10910 IPR036412 HAD-like superfamily LJF99_10910 IPR023214 HAD superfamily LJF99_10910 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LJF99_10910 IPR006439 HAD hydrolase, subfamily IA LJF99_10925 IPR013785 Aldolase-type TIM barrel LJF99_10925 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA LJF99_10925 IPR002220 DapA-like LJF99_10925 IPR020625 Schiff base-forming aldolase, active site LJF99_10925 IPR020624 Schiff base-forming aldolase, conserved site LJF99_10930 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_10930 IPR007848 Methyltransferase small domain LJF99_10930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_10930 IPR023543 rRNA small subunit methyltransferase C LJF99_10930 IPR013675 Methyltransferase small, N-terminal LJF99_10935 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_10935 IPR011004 Trimeric LpxA-like superfamily LJF99_10935 IPR005835 Nucleotidyl transferase domain LJF99_10935 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial LJF99_10935 IPR005836 ADP-glucose pyrophosphorylase, conserved site LJF99_10935 IPR011831 Glucose-1-phosphate adenylyltransferase LJF99_10940 IPR013534 Starch synthase, catalytic domain LJF99_10940 IPR001296 Glycosyl transferase, family 1 LJF99_10940 IPR011835 Bacterial/plant glycogen synthase LJF99_10980 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LJF99_10980 IPR004770 Na+/H+ antiporter NhaC LJF99_10990 IPR018357 Hexapeptide transferase, conserved site LJF99_10990 IPR024688 Maltose/galactoside acetyltransferase LJF99_10990 IPR011004 Trimeric LpxA-like superfamily LJF99_10990 IPR001451 Hexapeptide repeat LJF99_10995 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LJF99_10995 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_10995 IPR012769 Trehalose-6-phosphate hydrolase LJF99_10995 IPR017853 Glycoside hydrolase superfamily LJF99_10995 IPR013780 Glycosyl hydrolase, all-beta LJF99_11005 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_11005 IPR012771 Trehalose operon repressor LJF99_11005 IPR028082 Periplasmic binding protein-like I LJF99_11005 IPR000843 LacI-type HTH domain LJF99_11015 IPR004796 Phosphotransferase system, cellobiose-type IIC component LJF99_11015 IPR004501 Phosphotransferase system, EIIC component, type 3 LJF99_11015 IPR003352 Phosphotransferase system, EIIC LJF99_11020 IPR013012 Phosphotransferase system, EIIB component, type 3 LJF99_11020 IPR036095 PTS system IIB component-like superfamily LJF99_11020 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LJF99_11025 IPR004501 Phosphotransferase system, EIIC component, type 3 LJF99_11025 IPR004796 Phosphotransferase system, cellobiose-type IIC component LJF99_11025 IPR003352 Phosphotransferase system, EIIC LJF99_11030 IPR017853 Glycoside hydrolase superfamily LJF99_11030 IPR018120 Glycoside hydrolase family 1, active site LJF99_11030 IPR001360 Glycoside hydrolase family 1 LJF99_11035 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit LJF99_11035 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily LJF99_11040 IPR000600 ROK family LJF99_11050 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_11050 IPR000843 LacI-type HTH domain LJF99_11050 IPR028082 Periplasmic binding protein-like I LJF99_11060 IPR040919 Asparaginase/glutaminase, C-terminal LJF99_11060 IPR027475 Asparaginase/glutaminase, active site 2 LJF99_11060 IPR020827 Asparaginase/glutaminase, active site 1 LJF99_11060 IPR006034 Asparaginase/glutaminase-like LJF99_11060 IPR036152 Asparaginase/glutaminase-like superfamily LJF99_11060 IPR027473 L-asparaginase, C-terminal LJF99_11060 IPR037152 L-asparaginase, N-terminal domain superfamily LJF99_11060 IPR004550 L-asparaginase, type II LJF99_11060 IPR027474 L-asparaginase, N-terminal LJF99_11075 IPR004363 Methylglyoxal synthase LJF99_11075 IPR018148 Methylglyoxal synthase, active site LJF99_11075 IPR011607 Methylglyoxal synthase-like domain LJF99_11075 IPR036914 Methylglyoxal synthase-like domain superfamily LJF99_11085 IPR002024 Bacterioferritin LJF99_11085 IPR012347 Ferritin-like LJF99_11085 IPR009040 Ferritin-like diiron domain LJF99_11085 IPR009078 Ferritin-like superfamily LJF99_11085 IPR008331 Ferritin/DPS protein domain LJF99_11100 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain LJF99_11100 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA LJF99_11100 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal LJF99_11100 IPR038321 TmcA, C-terminal domain superfamily LJF99_11100 IPR032672 TmcA/NAT10/Kre33 LJF99_11100 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11100 IPR007807 Helicase domain LJF99_11100 IPR000182 GNAT domain LJF99_11100 IPR016181 Acyl-CoA N-acyltransferase LJF99_11105 IPR036291 NAD(P)-binding domain superfamily LJF99_11105 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_11105 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_11110 IPR036061 CheW-like domain superfamily LJF99_11110 IPR002545 CheW-like domain LJF99_11110 IPR011006 CheY-like superfamily LJF99_11110 IPR001789 Signal transduction response regulator, receiver domain LJF99_11110 IPR024181 Chemotaxis response regulator CheV LJF99_11120 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LJF99_11220 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY LJF99_11225 IPR006156 Dihydroneopterin aldolase LJF99_11225 IPR006157 Dihydroneopterin aldolase/epimerase domain LJF99_11230 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily LJF99_11230 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK LJF99_11240 IPR023721 Multidrug resistance protein MdtD LJF99_11240 IPR036259 MFS transporter superfamily LJF99_11240 IPR011701 Major facilitator superfamily LJF99_11240 IPR004638 Drug resistance transporter EmrB-like LJF99_11240 IPR020846 Major facilitator superfamily domain LJF99_11245 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LJF99_11245 IPR036627 CobW-like, C-terminal domain superfamily LJF99_11245 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LJF99_11245 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11255 IPR004778 Homoserine/Threonine efflux protein LJF99_11255 IPR001123 Amino acid exporter protein, LeuE-type LJF99_11260 IPR000847 Transcription regulator HTH, LysR LJF99_11260 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 LJF99_11260 IPR036390 Winged helix DNA-binding domain superfamily LJF99_11260 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_11260 IPR005119 LysR, substrate-binding LJF99_11265 IPR000847 Transcription regulator HTH, LysR LJF99_11265 IPR005119 LysR, substrate-binding LJF99_11265 IPR036390 Winged helix DNA-binding domain superfamily LJF99_11265 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_11270 IPR036291 NAD(P)-binding domain superfamily LJF99_11270 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_11270 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_11275 IPR035919 EAL domain superfamily LJF99_11275 IPR001633 EAL domain LJF99_11275 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LJF99_11280 IPR018136 Aconitase family, 4Fe-4S cluster binding site LJF99_11280 IPR015932 Aconitase, domain 2 LJF99_11280 IPR015929 Aconitase B, swivel LJF99_11280 IPR036288 Aconitase B, HEAT-like domain superfamily LJF99_11280 IPR015933 Aconitase B, HEAT-like domain LJF99_11280 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LJF99_11280 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LJF99_11280 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LJF99_11280 IPR004406 Aconitase B LJF99_11280 IPR036008 Aconitase, iron-sulfur domain LJF99_11295 IPR003660 HAMP domain LJF99_11295 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LJF99_11295 IPR004090 Chemotaxis methyl-accepting receptor LJF99_11295 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_11295 IPR000727 Target SNARE coiled-coil homology domain LJF99_11305 IPR013655 PAS fold-3 LJF99_11305 IPR013656 PAS fold-4 LJF99_11305 IPR035965 PAS domain superfamily LJF99_11305 IPR000700 PAS-associated, C-terminal LJF99_11305 IPR000014 PAS domain LJF99_11305 IPR001633 EAL domain LJF99_11305 IPR029787 Nucleotide cyclase LJF99_11305 IPR007895 MASE1 LJF99_11305 IPR000160 GGDEF domain LJF99_11305 IPR035919 EAL domain superfamily LJF99_11305 IPR001610 PAC motif LJF99_11310 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_11310 IPR023753 FAD/NAD(P)-binding domain LJF99_11310 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LJF99_11310 IPR006258 Dihydrolipoamide dehydrogenase LJF99_11310 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LJF99_11310 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJF99_11310 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LJF99_11315 IPR011053 Single hybrid motif LJF99_11315 IPR004167 Peripheral subunit-binding domain LJF99_11315 IPR036625 E3-binding domain superfamily LJF99_11315 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_11315 IPR000089 Biotin/lipoyl attachment LJF99_11315 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex LJF99_11315 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LJF99_11315 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LJF99_11320 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal LJF99_11320 IPR004660 Pyruvate dehydrogenase E1 component LJF99_11320 IPR041621 Pyruvate dehydrogenase E1 component, middle domain LJF99_11320 IPR029061 Thiamin diphosphate-binding fold LJF99_11320 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LJF99_11320 IPR005474 Transketolase, N-terminal LJF99_11325 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_11325 IPR000524 Transcription regulator HTH, GntR LJF99_11325 IPR036390 Winged helix DNA-binding domain superfamily LJF99_11325 IPR011711 GntR, C-terminal LJF99_11325 IPR008920 Transcription regulator FadR/GntR, C-terminal LJF99_11330 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LJF99_11330 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LJF99_11340 IPR013785 Aldolase-type TIM barrel LJF99_11340 IPR004393 Nicotinate-nucleotide pyrophosphorylase LJF99_11340 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD LJF99_11340 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal LJF99_11340 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily LJF99_11340 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal LJF99_11340 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal LJF99_11345 IPR012902 Prokaryotic N-terminal methylation site LJF99_11350 IPR007831 General secretory system II, protein E, N-terminal LJF99_11350 IPR042181 Type II secretion system, protein E, N-terminal LJF99_11350 IPR037257 General secretory system II, protein E, N-terminal superfamily LJF99_11350 IPR013374 ATPase, type IV, pilus assembly, PilB LJF99_11350 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11350 IPR001482 Type II/IV secretion system protein LJF99_11360 IPR010627 Peptidase A24A, N-terminal LJF99_11360 IPR014032 Peptidase A24A, prepilin type IV, bacterial LJF99_11360 IPR000045 Prepilin type IV endopeptidase, peptidase domain LJF99_11365 IPR001977 Dephospho-CoA kinase LJF99_11365 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11370 IPR009777 Cell division protein ZapD LJF99_11370 IPR027462 Z ring-associated protein D, C-terminal LJF99_11370 IPR036268 ZapD domain superfamily LJF99_11375 IPR013088 Zinc finger, NHR/GATA-type LJF99_11375 IPR005584 DNA gyrase inhibitor YacG LJF99_11380 IPR003561 Mutator MutT LJF99_11380 IPR020476 NUDIX hydrolase LJF99_11380 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_11380 IPR020084 NUDIX hydrolase, conserved site LJF99_11380 IPR000086 NUDIX hydrolase domain LJF99_11390 IPR036670 SecA, preprotein cross-linking domain superfamily LJF99_11390 IPR011116 SecA Wing/Scaffold LJF99_11390 IPR011130 SecA, preprotein cross-linking domain LJF99_11390 IPR014018 SecA motor DEAD LJF99_11390 IPR036266 SecA, Wing/Scaffold superfamily LJF99_11390 IPR020937 SecA conserved site LJF99_11390 IPR000185 Protein translocase subunit SecA LJF99_11390 IPR004027 SEC-C motif LJF99_11390 IPR011115 SecA DEAD-like, N-terminal LJF99_11390 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11400 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_11400 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase LJF99_11400 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal LJF99_11400 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal LJF99_11405 IPR003008 Tubulin/FtsZ, GTPase domain LJF99_11405 IPR036525 Tubulin/FtsZ, GTPase domain superfamily LJF99_11405 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LJF99_11405 IPR008280 Tubulin/FtsZ, C-terminal LJF99_11405 IPR024757 Cell division protein FtsZ, C-terminal LJF99_11405 IPR020805 Cell division protein FtsZ, conserved site LJF99_11405 IPR000158 Cell division protein FtsZ LJF99_11410 IPR020823 Cell division protein FtsA LJF99_11410 IPR003494 SHS2 domain inserted in FtsA LJF99_11415 IPR005548 Cell division protein FtsQ/DivIB LJF99_11415 IPR026579 Cell division protein FtsQ LJF99_11415 IPR034746 POTRA domain LJF99_11415 IPR013685 POTRA domain, FtsQ-type LJF99_11420 IPR000713 Mur ligase, N-terminal catalytic domain LJF99_11420 IPR013221 Mur ligase, central LJF99_11420 IPR036615 Mur ligase, C-terminal domain superfamily LJF99_11420 IPR005758 UDP-N-acetylmuramate--L-alanine ligase LJF99_11420 IPR036565 Mur-like, catalytic domain superfamily LJF99_11420 IPR004101 Mur ligase, C-terminal LJF99_11425 IPR006009 N-acetylglucosaminyltransferase, MurG LJF99_11425 IPR007235 Glycosyl transferase, family 28, C-terminal LJF99_11425 IPR004276 Glycosyltransferase family 28, N-terminal domain LJF99_11430 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LJF99_11430 IPR013437 Probable peptidoglycan glycosyltransferase FtsW LJF99_11430 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LJF99_11435 IPR036565 Mur-like, catalytic domain superfamily LJF99_11435 IPR004101 Mur ligase, C-terminal LJF99_11435 IPR036615 Mur ligase, C-terminal domain superfamily LJF99_11435 IPR013221 Mur ligase, central LJF99_11435 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase LJF99_11440 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site LJF99_11440 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase LJF99_11440 IPR000715 Glycosyl transferase, family 4 LJF99_11445 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase LJF99_11445 IPR036565 Mur-like, catalytic domain superfamily LJF99_11445 IPR004101 Mur ligase, C-terminal LJF99_11445 IPR036615 Mur ligase, C-terminal domain superfamily LJF99_11445 IPR013221 Mur ligase, central LJF99_11445 IPR000713 Mur ligase, N-terminal catalytic domain LJF99_11445 IPR035911 MurE/MurF, N-terminal LJF99_11450 IPR035911 MurE/MurF, N-terminal LJF99_11450 IPR000713 Mur ligase, N-terminal catalytic domain LJF99_11450 IPR013221 Mur ligase, central LJF99_11450 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase LJF99_11450 IPR004101 Mur ligase, C-terminal LJF99_11450 IPR036565 Mur-like, catalytic domain superfamily LJF99_11450 IPR036615 Mur ligase, C-terminal domain superfamily LJF99_11455 IPR001460 Penicillin-binding protein, transpeptidase LJF99_11455 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LJF99_11455 IPR005311 Penicillin-binding protein, dimerisation domain LJF99_11455 IPR012338 Beta-lactamase/transpeptidase-like LJF99_11455 IPR037532 Peptidoglycan D,D-transpeptidase FtsI LJF99_11460 IPR011922 Cell division protein FtsL LJF99_11465 IPR002903 Ribosomal RNA small subunit methyltransferase H LJF99_11465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_11465 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily LJF99_11470 IPR007159 SpoVT-AbrB domain LJF99_11470 IPR035644 MraZ, C-terminal LJF99_11470 IPR020603 MraZ domain LJF99_11470 IPR035642 MraZ, N-terminal LJF99_11470 IPR038619 MraZ superfamily LJF99_11470 IPR037914 SpoVT-AbrB domain superfamily LJF99_11470 IPR003444 Transcriptional regulator MraZ LJF99_11480 IPR008258 Transglycosylase SLT domain 1 LJF99_11480 IPR000189 Prokaryotic transglycosylase, active site LJF99_11480 IPR023346 Lysozyme-like domain superfamily LJF99_11480 IPR036779 LysM domain superfamily LJF99_11480 IPR018392 LysM domain LJF99_11485 IPR006665 OmpA-like domain LJF99_11485 IPR036737 OmpA-like domain superfamily LJF99_11485 IPR025713 Motility protein B, N-terminal domain LJF99_11490 IPR002898 MotA/TolQ/ExbB proton channel LJF99_11490 IPR000540 Flagellar motor protein MotA, conserved site LJF99_11490 IPR022522 Flagellar motor stator, MotA LJF99_11515 IPR036584 Flagellar protein FliS superfamily LJF99_11515 IPR003713 Flagellar protein FliS LJF99_11520 IPR010810 Flagellin hook, IN motif LJF99_11520 IPR040026 Flagellar hook-associated protein 2 LJF99_11520 IPR010809 Flagellar hook-associated protein 2, C-terminal LJF99_11520 IPR003481 Flagellar hook-associated protein 2, N-terminal LJF99_11535 IPR042187 Flagellin, C-terminal domain, subdomain 2 LJF99_11535 IPR001492 Flagellin LJF99_11535 IPR001029 Flagellin, D0/D1 domain LJF99_11555 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_11555 IPR019776 Flagellar basal body rod protein, conserved site LJF99_11555 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_11555 IPR002371 Flagellar hook-associated protein 1 LJF99_11565 IPR001782 Flagellar P-ring protein LJF99_11570 IPR000527 Flagellar L-ring protein LJF99_11575 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_11575 IPR012834 Flagellar basal-body rod FlgG LJF99_11575 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LJF99_11575 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_11575 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LJF99_11575 IPR019776 Flagellar basal body rod protein, conserved site LJF99_11580 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_11580 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_11580 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LJF99_11580 IPR012836 Flagellar basal-body rod FlgF LJF99_11580 IPR019776 Flagellar basal body rod protein, conserved site LJF99_11580 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LJF99_11585 IPR019776 Flagellar basal body rod protein, conserved site LJF99_11585 IPR011491 Flagellar hook protein FlgE LJF99_11585 IPR037058 Flagellar hook protein FlgE superfamily LJF99_11585 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LJF99_11585 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_11585 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LJF99_11585 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_11595 IPR005648 Flagellar hook capping protein LJF99_11595 IPR025965 FlgD Ig-like domain LJF99_11595 IPR025963 FlgD Tudor-like domain LJF99_11600 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_11600 IPR019776 Flagellar basal body rod protein, conserved site LJF99_11600 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_11600 IPR006299 Flagellar basal-body rod protein FlgC LJF99_11605 IPR006300 Flagellar basal-body rod protein FlgB LJF99_11605 IPR019776 Flagellar basal body rod protein, conserved site LJF99_11605 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_11615 IPR007412 Anti-sigma-28 factor, FlgM LJF99_11615 IPR035890 Anti-sigma-28 factor FlgM superfamily LJF99_11615 IPR031316 Anti-sigma-28 factor FlgM, C-terminal LJF99_11630 IPR040627 T3SS EscN ATPase, C-terminal LJF99_11630 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LJF99_11630 IPR003593 AAA+ ATPase domain LJF99_11630 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LJF99_11630 IPR020005 Flagellar export ATPase FliI, clade 1 LJF99_11630 IPR032463 ATPase, type III secretion system, FliI LJF99_11630 IPR005714 ATPase, type III secretion system, FliI/YscN LJF99_11630 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11640 IPR000090 Flagellar motor switch protein FliG LJF99_11640 IPR032779 Flagellar motor switch protein FliG, middle domain LJF99_11640 IPR028263 Flagellar motor switch protein FliG, N-terminal domain LJF99_11640 IPR011002 Flagellar motor switch protein FliG, alpha-helical LJF99_11640 IPR023087 Flagellar motor switch protein FliG, C-terminal LJF99_11645 IPR013556 Flagellar M-ring C-terminal LJF99_11645 IPR000067 Flagellar M-ring protein FliF LJF99_11645 IPR006182 Secretory protein YscJ/FliF LJF99_11650 IPR001624 Flagellar hook-basal body complex protein FliE LJF99_11655 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_11655 IPR003593 AAA+ ATPase domain LJF99_11655 IPR011006 CheY-like superfamily LJF99_11655 IPR009057 Homeobox-like domain superfamily LJF99_11655 IPR002197 DNA binding HTH domain, Fis-type LJF99_11655 IPR001789 Signal transduction response regulator, receiver domain LJF99_11655 IPR029995 Transcriptional activator SfnR/FlbD LJF99_11655 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11655 IPR025944 Sigma-54 interaction domain, conserved site LJF99_11655 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_11655 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_11660 IPR042196 FHIPEP, domain 4 LJF99_11660 IPR042194 FHIPEP, domain 1 LJF99_11660 IPR006301 Flagellar biosynthesis protein FlhA LJF99_11660 IPR001712 Type III secretion system FHIPEP LJF99_11660 IPR042193 FHIPEP, domain 3 LJF99_11660 IPR025505 FHIPEP conserved site LJF99_11665 IPR006136 Flagellar biosynthetic protein FlhB LJF99_11665 IPR006135 Type III secretion system substrate exporter LJF99_11665 IPR029025 Type III secretion system substrate exporter, C-terminal LJF99_11670 IPR002010 Type III secretion system inner membrane R protein LJF99_11670 IPR006303 Flagellar biosynthesis protein FliR LJF99_11675 IPR002191 Bacterial export protein family 3 LJF99_11675 IPR006305 Flagellar biosynthesis protein FliQ LJF99_11680 IPR005837 Flagellar transport protein FliP LJF99_11680 IPR005838 Type III secretion system inner membrane P protein LJF99_11685 IPR036429 SpoA-like superfamily LJF99_11685 IPR001543 Surface presentation of antigen (SpoA) LJF99_11685 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb LJF99_11685 IPR012826 Flagellar motor switch FliN LJF99_11700 IPR035996 Tetrapyrrole methylase superfamily LJF99_11700 IPR014777 Tetrapyrrole methylase, subdomain 1 LJF99_11700 IPR014776 Tetrapyrrole methylase, subdomain 2 LJF99_11700 IPR018063 SAM-dependent methyltransferase RsmI, conserved site LJF99_11700 IPR000878 Tetrapyrrole methylase LJF99_11700 IPR008189 rRNA small subunit methyltransferase I LJF99_11705 IPR007443 Penicillin-binding protein activator LpoA LJF99_11705 IPR028082 Periplasmic binding protein-like I LJF99_11705 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_11710 IPR011856 tRNA endonuclease-like domain superfamily LJF99_11710 IPR011335 Restriction endonuclease type II-like LJF99_11710 IPR003509 Uncharacterised protein family UPF0102 LJF99_11715 IPR035461 GmhA/DiaA LJF99_11715 IPR004515 Phosphoheptose isomerase LJF99_11715 IPR001347 Sugar isomerase (SIS) LJF99_11720 IPR007055 BON domain LJF99_11720 IPR014004 Transport-associated and nodulation domain, bacteria LJF99_11725 IPR036760 SspB-like superfamily LJF99_11725 IPR007481 Stringent starvation protein B LJF99_11730 IPR004046 Glutathione S-transferase, C-terminal LJF99_11730 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LJF99_11730 IPR010987 Glutathione S-transferase, C-terminal-like LJF99_11730 IPR040079 Glutathione Transferase family LJF99_11730 IPR004045 Glutathione S-transferase, N-terminal LJF99_11730 IPR036249 Thioredoxin-like superfamily LJF99_11730 IPR034341 Stringent starvation protein A, N-terminal LJF99_11735 IPR002326 Cytochrome c1 LJF99_11735 IPR036909 Cytochrome c-like domain superfamily LJF99_11735 IPR009056 Cytochrome c-like domain LJF99_11740 IPR036150 Cytochrome b/b6, C-terminal domain superfamily LJF99_11740 IPR027387 Cytochrome b/b6-like domain superfamily LJF99_11740 IPR030689 Cytochrome b LJF99_11740 IPR016174 Di-haem cytochrome, transmembrane LJF99_11740 IPR005798 Cytochrome b/b6, C-terminal LJF99_11740 IPR005797 Cytochrome b/b6, N-terminal LJF99_11745 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal LJF99_11745 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit LJF99_11745 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LJF99_11745 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LJF99_11745 IPR005805 Rieske iron-sulphur protein, C-terminal LJF99_11745 IPR014349 Rieske iron-sulphur protein LJF99_11750 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_11750 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_11750 IPR000754 Ribosomal protein S9 LJF99_11750 IPR020574 Ribosomal protein S9, conserved site LJF99_11750 IPR023035 Ribosomal protein S9, bacterial/plastid LJF99_11755 IPR023563 Ribosomal protein L13, conserved site LJF99_11755 IPR036899 Ribosomal protein L13 superfamily LJF99_11755 IPR005822 Ribosomal protein L13 LJF99_11755 IPR005823 Ribosomal protein L13, bacterial-type LJF99_11760 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11760 IPR030870 Cell division protein ZapE LJF99_11760 IPR005654 ATPase, AFG1-like LJF99_11770 IPR001478 PDZ domain LJF99_11770 IPR036034 PDZ superfamily LJF99_11770 IPR011782 Peptidase S1C, Do LJF99_11770 IPR009003 Peptidase S1, PA clan LJF99_11770 IPR001940 Peptidase S1C LJF99_11775 IPR001478 PDZ domain LJF99_11775 IPR009003 Peptidase S1, PA clan LJF99_11775 IPR011783 Peptidase S1C, DegS LJF99_11775 IPR036034 PDZ superfamily LJF99_11775 IPR001940 Peptidase S1C LJF99_11805 IPR006680 Amidohydrolase-related LJF99_11805 IPR020043 Deacetylase Atu3266-like LJF99_11805 IPR011059 Metal-dependent hydrolase, composite domain superfamily LJF99_11805 IPR032466 Metal-dependent hydrolase LJF99_11810 IPR018319 L-seryl-tRNA selenium transferase-like LJF99_11810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_11810 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like LJF99_11810 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_11815 IPR013785 Aldolase-type TIM barrel LJF99_11815 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase LJF99_11825 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LJF99_11825 IPR000032 Phosphocarrier protein HPr-like LJF99_11825 IPR035895 HPr-like superfamily LJF99_11825 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LJF99_11830 IPR005337 RapZ-like family LJF99_11830 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11835 IPR016152 Phosphotransferase/anion transporter LJF99_11835 IPR002178 PTS EIIA type-2 domain LJF99_11835 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN LJF99_11840 IPR036567 Ribosome hibernation promotion factor-like LJF99_11840 IPR003489 Ribosome hibernation promoting factor/RaiA LJF99_11845 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily LJF99_11845 IPR007046 RNA polymerase sigma factor 54, core-binding domain LJF99_11845 IPR007634 RNA polymerase sigma factor 54, DNA-binding LJF99_11845 IPR000394 RNA polymerase sigma factor 54 LJF99_11850 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11850 IPR003593 AAA+ ATPase domain LJF99_11850 IPR003439 ABC transporter-like LJF99_11850 IPR017871 ABC transporter, conserved site LJF99_11850 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LJF99_11850 IPR030921 LPS export ABC transporter, ATP-binding protein LptB LJF99_11855 IPR005653 Organic solvent tolerance-like, N-terminal LJF99_11855 IPR014340 Lipopolysaccharide export system protein LptA LJF99_11860 IPR010664 Lipopolysaccharide assembly, LptC-related LJF99_11860 IPR026265 Lipopolysaccharide export system protein LptC LJF99_11865 IPR036412 HAD-like superfamily LJF99_11865 IPR010023 KdsC family LJF99_11865 IPR023214 HAD superfamily LJF99_11870 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type LJF99_11870 IPR000644 CBS domain LJF99_11870 IPR001347 Sugar isomerase (SIS) LJF99_11870 IPR035474 KpsF-like, SIS domain LJF99_11875 IPR017871 ABC transporter, conserved site LJF99_11875 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl LJF99_11875 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11875 IPR003593 AAA+ ATPase domain LJF99_11875 IPR003439 ABC transporter-like LJF99_11880 IPR003453 ABC transport permease subunit MlaE, Proteobacteria LJF99_11880 IPR030802 ABC transporter permease MalE LJF99_11885 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD LJF99_11885 IPR003399 Mce/MlaD LJF99_11890 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC LJF99_11890 IPR042245 Tgt2/MlaC superfamily LJF99_11900 IPR002634 BolA protein LJF99_11900 IPR036065 BolA-like superfamily LJF99_11905 IPR001986 Enolpyruvate transferase domain LJF99_11905 IPR036968 Enolpyruvate transferase domain superfamily LJF99_11905 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase LJF99_11905 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta LJF99_11910 IPR002510 Metalloprotease TldD/PmbA LJF99_11910 IPR035068 Metalloprotease TldD/PmbA, N-terminal LJF99_11910 IPR036059 Metalloprotease TldD/PmbA superfamily LJF99_11915 IPR023153 PSPTO4464-like domain superfamily LJF99_11915 IPR006839 Ribosome-associated, YjgA LJF99_11925 IPR007458 Protein of unknown function DUF496 LJF99_11950 IPR036412 HAD-like superfamily LJF99_11950 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LJF99_11950 IPR023214 HAD superfamily LJF99_11950 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase LJF99_11950 IPR006543 Histidinol-phosphate phosphatase LJF99_11955 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain LJF99_11955 IPR004161 Translation elongation factor EFTu-like, domain 2 LJF99_11955 IPR033720 Elongation factor Tu, domain 2 LJF99_11955 IPR031157 Tr-type G domain, conserved site LJF99_11955 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11955 IPR005225 Small GTP-binding protein domain LJF99_11955 IPR000795 Transcription factor, GTP-binding domain LJF99_11955 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_11955 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LJF99_11955 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle LJF99_11955 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LJF99_11960 IPR041095 Elongation Factor G, domain II LJF99_11960 IPR009022 Elongation factor G, domain III LJF99_11960 IPR035647 EF-G domain III/V-like LJF99_11960 IPR035649 EFG, domain V LJF99_11960 IPR000640 Elongation factor EFG, domain V-like LJF99_11960 IPR004161 Translation elongation factor EFTu-like, domain 2 LJF99_11960 IPR031157 Tr-type G domain, conserved site LJF99_11960 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_11960 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_11960 IPR005225 Small GTP-binding protein domain LJF99_11960 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_11960 IPR005517 Translation elongation factor EFG/EF2, domain IV LJF99_11960 IPR004540 Translation elongation factor EFG/EF2 LJF99_11960 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_11960 IPR000795 Transcription factor, GTP-binding domain LJF99_11965 IPR005717 Ribosomal protein S7, bacterial/organellar-type LJF99_11965 IPR020606 Ribosomal protein S7, conserved site LJF99_11965 IPR023798 Ribosomal protein S7 domain LJF99_11965 IPR036823 Ribosomal protein S7 domain superfamily LJF99_11965 IPR000235 Ribosomal protein S5/S7 LJF99_11970 IPR012340 Nucleic acid-binding, OB-fold LJF99_11970 IPR006032 Ribosomal protein S12/S23 LJF99_11970 IPR005679 Ribosomal protein S12, bacterial-type LJF99_11975 IPR023526 Sulphur relay, TusB LJF99_11975 IPR007215 Sulphur relay, TusB/DsrH LJF99_11975 IPR027396 DsrEFH-like LJF99_11980 IPR017462 Sulphur relay, TusC/DsrF LJF99_11980 IPR003787 Sulphur relay, DsrE/F-like protein LJF99_11980 IPR027396 DsrEFH-like LJF99_11985 IPR027396 DsrEFH-like LJF99_11985 IPR003787 Sulphur relay, DsrE/F-like protein LJF99_11985 IPR017463 Sulphur relay, TusD/DsrE LJF99_11990 IPR006056 RidA family LJF99_11990 IPR019897 RidA, conserved site LJF99_11990 IPR035959 RutC-like superfamily LJF99_11990 IPR006175 YjgF/YER057c/UK114 family LJF99_11995 IPR039446 Transcriptional regulator DauR-like LJF99_11995 IPR039445 Transcriptional regulator DauR-like, HTH domain LJF99_11995 IPR013559 YheO-like LJF99_12000 IPR042102 RNA polymerase Rpb1, domain 3 superfamily LJF99_12000 IPR007066 RNA polymerase Rpb1, domain 3 LJF99_12000 IPR012754 DNA-directed RNA polymerase, subunit beta-prime LJF99_12000 IPR006592 RNA polymerase, N-terminal LJF99_12000 IPR007080 RNA polymerase Rpb1, domain 1 LJF99_12000 IPR000722 RNA polymerase, alpha subunit LJF99_12000 IPR038120 RNA polymerase Rpb1, funnel domain superfamily LJF99_12000 IPR007081 RNA polymerase Rpb1, domain 5 LJF99_12000 IPR007083 RNA polymerase Rpb1, domain 4 LJF99_12005 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type LJF99_12005 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain LJF99_12005 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily LJF99_12005 IPR007121 RNA polymerase, beta subunit, conserved site LJF99_12005 IPR007644 RNA polymerase, beta subunit, protrusion LJF99_12005 IPR007642 RNA polymerase Rpb2, domain 2 LJF99_12005 IPR037034 RNA polymerase Rpb2, domain 2 superfamily LJF99_12005 IPR007645 RNA polymerase Rpb2, domain 3 LJF99_12005 IPR007641 RNA polymerase Rpb2, domain 7 LJF99_12005 IPR014724 RNA polymerase Rpb2, OB-fold LJF99_12005 IPR015712 DNA-directed RNA polymerase, subunit 2 LJF99_12005 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain LJF99_12010 IPR008932 Ribosomal protein L7/L12, oligomerisation LJF99_12010 IPR013823 Ribosomal protein L7/L12, C-terminal LJF99_12010 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LJF99_12010 IPR000206 Ribosomal protein L7/L12 LJF99_12010 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily LJF99_12015 IPR022973 Ribosomal protein L10 LJF99_12015 IPR001790 Ribosomal protein L10P LJF99_12015 IPR002363 Ribosomal protein L10, eubacterial, conserved site LJF99_12020 IPR023673 Ribosomal protein L1, conserved site LJF99_12020 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LJF99_12020 IPR023674 Ribosomal protein L1-like LJF99_12020 IPR002143 Ribosomal protein L1 LJF99_12020 IPR005878 Ribosomal protein L1, bacterial-type LJF99_12020 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LJF99_12025 IPR020783 Ribosomal protein L11, C-terminal LJF99_12025 IPR000911 Ribosomal protein L11/L12 LJF99_12025 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily LJF99_12025 IPR036769 Ribosomal protein L11, C-terminal domain superfamily LJF99_12025 IPR020785 Ribosomal protein L11, conserved site LJF99_12025 IPR020784 Ribosomal protein L11, N-terminal LJF99_12025 IPR006519 Ribosomal protein L11, bacterial-type LJF99_12030 IPR001062 Transcription antitermination protein, NusG LJF99_12030 IPR005824 KOW LJF99_12030 IPR006645 NusG, N-terminal LJF99_12030 IPR036735 NusG, N-terminal domain superfamily LJF99_12030 IPR014722 Ribosomal protein L2, domain 2 LJF99_12030 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site LJF99_12030 IPR008991 Translation protein SH3-like domain superfamily LJF99_12035 IPR038379 SecE superfamily LJF99_12035 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit LJF99_12035 IPR005807 SecE subunit of protein translocation complex, bacterial-like LJF99_12045 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12045 IPR000795 Transcription factor, GTP-binding domain LJF99_12045 IPR005225 Small GTP-binding protein domain LJF99_12045 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LJF99_12045 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_12045 IPR031157 Tr-type G domain, conserved site LJF99_12045 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LJF99_12045 IPR004161 Translation elongation factor EFTu-like, domain 2 LJF99_12045 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain LJF99_12045 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle LJF99_12045 IPR033720 Elongation factor Tu, domain 2 LJF99_12060 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12060 IPR004566 Pantothenate kinase LJF99_12060 IPR006083 Phosphoribulokinase/uridine kinase LJF99_12065 IPR036390 Winged helix DNA-binding domain superfamily LJF99_12065 IPR030855 Bifunctional ligase/repressor BirA LJF99_12065 IPR004408 Biotin--acetyl-CoA-carboxylase ligase LJF99_12065 IPR004409 Biotin operon repressor, helix-turn-helix domain LJF99_12065 IPR003142 Biotin protein ligase, C-terminal LJF99_12065 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LJF99_12065 IPR013196 Helix-turn-helix, type 11 LJF99_12065 IPR008988 Transcriptional repressor, C-terminal LJF99_12065 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_12070 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily LJF99_12070 IPR016166 FAD-binding domain, PCMH-type LJF99_12070 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_12070 IPR016167 FAD-binding, type PCMH, subdomain 1 LJF99_12070 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_12070 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase LJF99_12070 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal LJF99_12070 IPR006094 FAD linked oxidase, N-terminal LJF99_12075 IPR036291 NAD(P)-binding domain superfamily LJF99_12075 IPR006037 Regulator of K+ conductance, C-terminal LJF99_12075 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_12075 IPR003148 Regulator of K+ conductance, N-terminal LJF99_12080 IPR003445 Cation transporter LJF99_12080 IPR004772 TrkH potassium transport family LJF99_12085 IPR000380 DNA topoisomerase, type IA LJF99_12085 IPR005738 DNA topoisomerase III LJF99_12085 IPR003601 DNA topoisomerase, type IA, domain 2 LJF99_12085 IPR023406 DNA topoisomerase, type IA, active site LJF99_12085 IPR013497 DNA topoisomerase, type IA, central LJF99_12085 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LJF99_12085 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LJF99_12085 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LJF99_12085 IPR023405 DNA topoisomerase, type IA, core domain LJF99_12085 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LJF99_12085 IPR006171 TOPRIM domain LJF99_12085 IPR034144 DNA topoisomerase 3-like, TOPRIM domain LJF99_12090 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK LJF99_12090 IPR011031 Multihaem cytochrome LJF99_12090 IPR036280 Multiheme cytochrome superfamily LJF99_12090 IPR038266 NapC/NirT cytochrome c superfamily LJF99_12090 IPR005126 NapC/NirT cytochrome c, N-terminal LJF99_12095 IPR006311 Twin-arginine translocation pathway, signal sequence LJF99_12095 IPR009010 Aspartate decarboxylase-like domain superfamily LJF99_12095 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase LJF99_12095 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain LJF99_12095 IPR041460 Molybdopterin oxidoreductase, N-terminal LJF99_12095 IPR006657 Molybdopterin dinucleotide-binding domain LJF99_12095 IPR006656 Molybdopterin oxidoreductase LJF99_12095 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site LJF99_12105 IPR005467 Histidine kinase domain LJF99_12105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_12105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_12105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_12105 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_12105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_12105 IPR003660 HAMP domain LJF99_12110 IPR001789 Signal transduction response regulator, receiver domain LJF99_12110 IPR011006 CheY-like superfamily LJF99_12110 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_12110 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_12110 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_12110 IPR039420 Transcriptional regulatory protein WalR-like LJF99_12125 IPR013130 Ferric reductase transmembrane component-like domain LJF99_12125 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ LJF99_12130 IPR006311 Twin-arginine translocation pathway, signal sequence LJF99_12130 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily LJF99_12130 IPR000572 Oxidoreductase, molybdopterin-binding domain LJF99_12130 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP LJF99_12135 IPR009476 Protein of unknown function DUF1097 LJF99_12140 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_12140 IPR003593 AAA+ ATPase domain LJF99_12140 IPR011006 CheY-like superfamily LJF99_12140 IPR009057 Homeobox-like domain superfamily LJF99_12140 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12140 IPR001789 Signal transduction response regulator, receiver domain LJF99_12140 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_12140 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_12140 IPR025944 Sigma-54 interaction domain, conserved site LJF99_12150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_12150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_12150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_12150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_12150 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_12150 IPR005467 Histidine kinase domain LJF99_12165 IPR036291 NAD(P)-binding domain superfamily LJF99_12165 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_12165 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_12170 IPR002646 Poly A polymerase, head domain LJF99_12170 IPR038763 DHH phosphoesterase superfamily LJF99_12170 IPR001667 DDH domain LJF99_12170 IPR000644 CBS domain LJF99_12170 IPR003156 DHHA1 domain LJF99_12185 IPR011991 ArsR-like helix-turn-helix domain LJF99_12185 IPR000485 AsnC-type HTH domain LJF99_12185 IPR019888 Transcription regulator AsnC-type LJF99_12185 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LJF99_12185 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LJF99_12185 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_12185 IPR036390 Winged helix DNA-binding domain superfamily LJF99_12185 IPR011008 Dimeric alpha-beta barrel LJF99_12190 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_12190 IPR004618 Aspartate--ammonia ligase LJF99_12195 IPR003959 ATPase, AAA-type, core LJF99_12195 IPR017730 Chaperonin ClpB LJF99_12195 IPR019489 Clp ATPase, C-terminal LJF99_12195 IPR036628 Clp, N-terminal domain superfamily LJF99_12195 IPR004176 Clp, N-terminal LJF99_12195 IPR001270 ClpA/B family LJF99_12195 IPR018368 ClpA/B, conserved site 1 LJF99_12195 IPR003593 AAA+ ATPase domain LJF99_12195 IPR041546 ClpA/ClpB, AAA lid domain LJF99_12195 IPR028299 ClpA/B, conserved site 2 LJF99_12195 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12200 IPR038371 Multi-copper polyphenol oxidoreductase superfamily LJF99_12200 IPR003730 Multi-copper polyphenol oxidoreductase LJF99_12200 IPR011324 Cytotoxic necrotizing factor-like, catalytic LJF99_12205 IPR006225 Pseudouridine synthase, RluC/RluD LJF99_12205 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LJF99_12205 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_12205 IPR002942 RNA-binding S4 domain LJF99_12205 IPR036986 RNA-binding S4 domain superfamily LJF99_12205 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_12210 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_12210 IPR017689 Outer membrane protein assembly factor BamD LJF99_12210 IPR039565 Outer membrane lipoprotein BamD-like LJF99_12215 IPR023753 FAD/NAD(P)-binding domain LJF99_12215 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LJF99_12215 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJF99_12215 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_12220 IPR001991 Sodium:dicarboxylate symporter LJF99_12220 IPR036458 Sodium:dicarboxylate symporter superfamily LJF99_12225 IPR005130 Serine dehydratase-like, alpha subunit LJF99_12225 IPR021144 Uncharacterised protein family UPF0597 LJF99_12230 IPR039445 Transcriptional regulator DauR-like, HTH domain LJF99_12230 IPR013559 YheO-like LJF99_12230 IPR039446 Transcriptional regulator DauR-like LJF99_12240 IPR012136 NADP transhydrogenase, beta subunit LJF99_12240 IPR029035 DHS-like NAD/FAD-binding domain superfamily LJF99_12240 IPR034300 NADP transhydrogenase beta-like domain LJF99_12245 IPR026255 NAD(P) transhydrogenase, alpha subunit LJF99_12245 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 LJF99_12245 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 LJF99_12245 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LJF99_12245 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LJF99_12245 IPR036291 NAD(P)-binding domain superfamily LJF99_12245 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal LJF99_12250 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LJF99_12250 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LJF99_12255 IPR018060 DNA binding HTH domain, AraC-type LJF99_12255 IPR009594 Transcription regulator HTH, AraC, N-terminal LJF99_12255 IPR009057 Homeobox-like domain superfamily LJF99_12260 IPR000566 Lipocalin/cytosolic fatty-acid binding domain LJF99_12260 IPR012674 Calycin LJF99_12260 IPR022271 Lipocalin, ApoD type LJF99_12260 IPR002446 Lipocalin, bacterial LJF99_12260 IPR022272 Lipocalin family conserved site LJF99_12265 IPR000727 Target SNARE coiled-coil homology domain LJF99_12265 IPR003660 HAMP domain LJF99_12265 IPR004090 Chemotaxis methyl-accepting receptor LJF99_12265 IPR029151 Periplasmic sensor-like domain superfamily LJF99_12265 IPR033479 Double Cache domain 1 LJF99_12265 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_12270 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 LJF99_12270 IPR003817 Phosphatidylserine decarboxylase-related LJF99_12270 IPR033177 Phosphatidylserine decarboxylase LJF99_12285 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LJF99_12285 IPR002082 Aspartate carbamoyltransferase LJF99_12285 IPR006130 Aspartate/ornithine carbamoyltransferase LJF99_12285 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LJF99_12285 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LJF99_12290 IPR002801 Aspartate transcarbamylase regulatory subunit LJF99_12290 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal LJF99_12290 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily LJF99_12290 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily LJF99_12290 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LJF99_12295 IPR036390 Winged helix DNA-binding domain superfamily LJF99_12295 IPR036251 Arginine repressor, C-terminal domain superfamily LJF99_12295 IPR001669 Arginine repressor LJF99_12295 IPR020900 Arginine repressor, DNA-binding domain LJF99_12295 IPR020899 Arginine repressor, C-terminal LJF99_12295 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_12300 IPR018385 C4-dicarboxylate anaerobic carrier-like LJF99_12305 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LJF99_12305 IPR024904 Ornithine carbamoyltransferase LJF99_12305 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LJF99_12305 IPR006130 Aspartate/ornithine carbamoyltransferase LJF99_12305 IPR002292 Ornithine/putrescine carbamoyltransferase LJF99_12305 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LJF99_12310 IPR036393 Acetylglutamate kinase-like superfamily LJF99_12310 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_12310 IPR003964 Carbamate kinase LJF99_12315 IPR003876 Arginine deiminase LJF99_12335 IPR029151 Periplasmic sensor-like domain superfamily LJF99_12335 IPR033479 Double Cache domain 1 LJF99_12335 IPR003660 HAMP domain LJF99_12335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_12335 IPR000727 Target SNARE coiled-coil homology domain LJF99_12345 IPR015862 ABC transporter, galactose import, MglA LJF99_12345 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12345 IPR017871 ABC transporter, conserved site LJF99_12345 IPR003439 ABC transporter-like LJF99_12345 IPR003593 AAA+ ATPase domain LJF99_12350 IPR025997 Periplasmic binding protein LJF99_12350 IPR028082 Periplasmic binding protein-like I LJF99_12360 IPR000843 LacI-type HTH domain LJF99_12360 IPR028082 Periplasmic binding protein-like I LJF99_12360 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_12365 IPR005886 UDP-glucose 4-epimerase LJF99_12365 IPR016040 NAD(P)-binding domain LJF99_12365 IPR036291 NAD(P)-binding domain superfamily LJF99_12370 IPR036265 HIT-like superfamily LJF99_12370 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal LJF99_12370 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal LJF99_12370 IPR001937 Galactose-1-phosphate uridyl transferase, class I LJF99_12370 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site LJF99_12375 IPR006204 GHMP kinase N-terminal domain LJF99_12375 IPR019741 Galactokinase, conserved site LJF99_12375 IPR019539 Galactokinase galactose-binding domain LJF99_12375 IPR013750 GHMP kinase, C-terminal domain LJF99_12375 IPR036554 GHMP kinase, C-terminal domain superfamily LJF99_12375 IPR000705 Galactokinase LJF99_12375 IPR006203 GHMP kinase, ATP-binding, conserved site LJF99_12375 IPR022963 Galactokinase, bacterial LJF99_12375 IPR006206 Mevalonate/galactokinase LJF99_12375 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_12375 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_12380 IPR015443 Aldose 1-epimerase LJF99_12380 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase LJF99_12380 IPR011013 Galactose mutarotase-like domain superfamily LJF99_12380 IPR014718 Glycoside hydrolase-type carbohydrate-binding LJF99_12380 IPR018052 Aldose 1-epimerase, conserved site LJF99_12380 IPR013458 Aldose 1-epimerase, bacterial LJF99_12385 IPR036812 NADP-dependent oxidoreductase domain superfamily LJF99_12385 IPR023210 NADP-dependent oxidoreductase domain LJF99_12390 IPR003824 Undecaprenyl-diphosphatase UppP LJF99_12400 IPR014284 RNA polymerase sigma-70 like domain LJF99_12400 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_12400 IPR013324 RNA polymerase sigma factor, region 3/4-like LJF99_12400 IPR013325 RNA polymerase sigma factor, region 2 LJF99_12400 IPR007630 RNA polymerase sigma-70 region 4 LJF99_12400 IPR039425 RNA polymerase sigma-70 like LJF99_12400 IPR007627 RNA polymerase sigma-70 region 2 LJF99_12410 IPR005148 Arginyl tRNA synthetase N-terminal domain LJF99_12410 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LJF99_12410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_12410 IPR008909 DALR anticodon binding LJF99_12410 IPR035684 Arginyl-tRNA synthetase, catalytic core domain LJF99_12410 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily LJF99_12410 IPR001278 Arginine-tRNA ligase LJF99_12410 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_12420 IPR029055 Nucleophile aminohydrolases, N-terminal LJF99_12420 IPR001353 Proteasome, subunit alpha/beta LJF99_12420 IPR023333 Proteasome B-type subunit LJF99_12420 IPR022281 ATP-dependent protease, HslV subunit LJF99_12425 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12425 IPR003593 AAA+ ATPase domain LJF99_12425 IPR019489 Clp ATPase, C-terminal LJF99_12425 IPR003959 ATPase, AAA-type, core LJF99_12425 IPR004491 Heat shock protein HslU LJF99_12430 IPR011701 Major facilitator superfamily LJF99_12430 IPR020846 Major facilitator superfamily domain LJF99_12430 IPR036259 MFS transporter superfamily LJF99_12435 IPR036390 Winged helix DNA-binding domain superfamily LJF99_12435 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain LJF99_12435 IPR023746 Transcription regulator HTH, YidZ LJF99_12435 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_12435 IPR005119 LysR, substrate-binding LJF99_12435 IPR000847 Transcription regulator HTH, LysR LJF99_12440 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LJF99_12440 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_12440 IPR023753 FAD/NAD(P)-binding domain LJF99_12440 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LJF99_12440 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LJF99_12440 IPR017121 Nitrite reductase [NAD(P)H], large subunit LJF99_12440 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LJF99_12440 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LJF99_12440 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal LJF99_12440 IPR007419 BFD-like [2Fe-2S]-binding domain LJF99_12440 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB LJF99_12450 IPR017881 Nitrite reductase (NADH) small subunit LJF99_12450 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type LJF99_12450 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LJF99_12455 IPR024002 Formate/nitrite transporter, conserved site LJF99_12455 IPR023271 Aquaporin-like LJF99_12455 IPR000292 Formate/nitrite transporter LJF99_12460 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site LJF99_12460 IPR006367 Sirohaem synthase, N-terminal LJF99_12460 IPR019478 Sirohaem synthase, dimerisation domain LJF99_12460 IPR028281 Siroheme synthase, central domain LJF99_12460 IPR012409 Sirohaem synthase LJF99_12460 IPR000878 Tetrapyrrole methylase LJF99_12460 IPR036291 NAD(P)-binding domain superfamily LJF99_12460 IPR006366 Uroporphyrin-III C-methyltransferase LJF99_12460 IPR014776 Tetrapyrrole methylase, subdomain 2 LJF99_12460 IPR014777 Tetrapyrrole methylase, subdomain 1 LJF99_12460 IPR035996 Tetrapyrrole methylase superfamily LJF99_12460 IPR037115 Sirohaem synthase, dimerisation domain superfamily LJF99_12465 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily LJF99_12465 IPR006669 Magnesium transporter MgtE LJF99_12465 IPR006667 SLC41 divalent cation transporters, integral membrane domain LJF99_12465 IPR038076 MgtE, N-terminal domain superfamily LJF99_12465 IPR000644 CBS domain LJF99_12465 IPR038048 Magnesium transporter MgtE, transmembrane domain LJF99_12465 IPR006668 Magnesium transporter, MgtE intracellular domain LJF99_12475 IPR010203 Regulator of ribonuclease activity A LJF99_12475 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LJF99_12475 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily LJF99_12475 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria LJF99_12480 IPR003744 Queuosine precursor transporter LJF99_12490 IPR003846 Protein adenylyltransferase SelO LJF99_12495 IPR036909 Cytochrome c-like domain superfamily LJF99_12495 IPR009056 Cytochrome c-like domain LJF99_12500 IPR004589 DNA helicase, ATP-dependent, RecQ type LJF99_12500 IPR011545 DEAD/DEAH box helicase domain LJF99_12500 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_12500 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LJF99_12500 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12500 IPR018982 RQC domain LJF99_12500 IPR010997 HRDC-like superfamily LJF99_12500 IPR001650 Helicase, C-terminal LJF99_12500 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_12500 IPR002121 HRDC domain LJF99_12500 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial LJF99_12505 IPR029069 HotDog domain superfamily LJF99_12505 IPR003736 Phenylacetic acid degradation-related domain LJF99_12505 IPR006683 Thioesterase domain LJF99_12520 IPR011037 Pyruvate kinase-like, insert domain superfamily LJF99_12520 IPR005163 3-alpha domain LJF99_12520 IPR005302 Molybdenum cofactor sulfurase, C-terminal LJF99_12525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_12525 IPR035906 MetI-like superfamily LJF99_12530 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_12530 IPR035906 MetI-like superfamily LJF99_12535 IPR013611 Transport-associated OB, type 2 LJF99_12535 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12535 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit LJF99_12535 IPR003439 ABC transporter-like LJF99_12535 IPR008995 Molybdate/tungstate binding, C-terminal LJF99_12535 IPR017871 ABC transporter, conserved site LJF99_12535 IPR003593 AAA+ ATPase domain LJF99_12540 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein LJF99_12540 IPR006059 Bacterial extracellular solute-binding protein LJF99_12545 IPR006059 Bacterial extracellular solute-binding protein LJF99_12545 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein LJF99_12550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_12550 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_12550 IPR005814 Aminotransferase class-III LJF99_12550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_12555 IPR036651 Glutamine synthetase, N-terminal domain superfamily LJF99_12555 IPR008146 Glutamine synthetase, catalytic domain LJF99_12555 IPR027303 Glutamine synthetase, glycine-rich site LJF99_12555 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LJF99_12560 IPR012784 RNA polymerase-binding transcription factor DksA LJF99_12560 IPR037187 DksA, N-terminal domain superfamily LJF99_12560 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LJF99_12560 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LJF99_12560 IPR000962 Zinc finger, DksA/TraR C4-type LJF99_12570 IPR010292 Uncharacterised protein family CreA LJF99_12575 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_12575 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LJF99_12575 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LJF99_12575 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LJF99_12575 IPR036291 NAD(P)-binding domain superfamily LJF99_12580 IPR018181 Heat shock protein 70, conserved site LJF99_12580 IPR013126 Heat shock protein 70 family LJF99_12580 IPR042054 YegD-like LJF99_12595 IPR013780 Glycosyl hydrolase, all-beta LJF99_12595 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_12595 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain LJF99_12595 IPR017853 Glycoside hydrolase superfamily LJF99_12595 IPR014756 Immunoglobulin E-set LJF99_12595 IPR017069 Maltodextrin glucosidase LJF99_12600 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) LJF99_12600 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain LJF99_12600 IPR036291 NAD(P)-binding domain superfamily LJF99_12610 IPR038717 Tc1-like transposase, DDE domain LJF99_12610 IPR025959 Winged helix-turn helix domain LJF99_12610 IPR012337 Ribonuclease H-like superfamily LJF99_12610 IPR009057 Homeobox-like domain superfamily LJF99_12620 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_12620 IPR013645 Glycosyl transferase, family 8, C-terminal LJF99_12620 IPR002495 Glycosyl transferase, family 8 LJF99_12640 IPR020459 AMP-binding LJF99_12640 IPR020845 AMP-binding, conserved site LJF99_12640 IPR000873 AMP-dependent synthetase/ligase LJF99_12640 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_12640 IPR042099 AMP-dependent synthetase-like superfamily LJF99_12645 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LJF99_12645 IPR036291 NAD(P)-binding domain superfamily LJF99_12645 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_12645 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_12660 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_12660 IPR003329 Acylneuraminate cytidylyltransferase LJF99_12660 IPR020039 Pseudaminic acid cytidylyltransferase LJF99_12670 IPR013785 Aldolase-type TIM barrel LJF99_12670 IPR013132 N-acetylneuraminic acid synthase, N-terminal LJF99_12670 IPR020030 Pseudaminic acid biosynthesis, PseI LJF99_12670 IPR013974 SAF domain LJF99_12670 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal LJF99_12670 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily LJF99_12740 IPR030390 RNA methyltransferase TrmA, active site LJF99_12740 IPR030391 RNA methyltransferase TrmA, conserved site LJF99_12740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_12740 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA LJF99_12740 IPR010280 (Uracil-5)-methyltransferase family LJF99_12745 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_12745 IPR001789 Signal transduction response regulator, receiver domain LJF99_12745 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_12745 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_12745 IPR011006 CheY-like superfamily LJF99_12745 IPR039420 Transcriptional regulatory protein WalR-like LJF99_12750 IPR003660 HAMP domain LJF99_12750 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_12750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_12750 IPR005467 Histidine kinase domain LJF99_12750 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_12750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_12750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_12760 IPR001891 Malic oxidoreductase LJF99_12760 IPR036291 NAD(P)-binding domain superfamily LJF99_12760 IPR012302 Malic enzyme, NAD-binding LJF99_12760 IPR012301 Malic enzyme, N-terminal domain LJF99_12760 IPR015884 Malic enzyme, conserved site LJF99_12760 IPR037062 Malic enzyme, N-terminal domain superfamily LJF99_12765 IPR021295 Protein of unknown function DUF2867 LJF99_12765 IPR016040 NAD(P)-binding domain LJF99_12765 IPR036291 NAD(P)-binding domain superfamily LJF99_12770 IPR034704 L28p-like LJF99_12770 IPR002150 Ribosomal protein L31 LJF99_12770 IPR027491 Ribosomal protein L31 type A LJF99_12770 IPR042105 Ribosomal protein L31 superfamily LJF99_12775 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily LJF99_12775 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain LJF99_12775 IPR041236 Primosomal protein N, C-terminal domain LJF99_12775 IPR041222 Primosomal protein N', 3' DNA-binding domain LJF99_12775 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12775 IPR001650 Helicase, C-terminal LJF99_12775 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_12775 IPR011545 DEAD/DEAH box helicase domain LJF99_12775 IPR005259 Primosomal protein N' LJF99_12785 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LJF99_12785 IPR009057 Homeobox-like domain superfamily LJF99_12785 IPR001647 DNA-binding HTH domain, TetR-type LJF99_12785 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LJF99_12795 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_12795 IPR036737 OmpA-like domain superfamily LJF99_12795 IPR006665 OmpA-like domain LJF99_12795 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LJF99_12795 IPR006664 Outer membrane protein, bacterial LJF99_12795 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LJF99_12795 IPR002368 Outer membrane protein, OmpA LJF99_12800 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LJF99_12800 IPR005787 Threonine dehydratase, biosynthetic LJF99_12800 IPR038110 Threonine dehydratase, ACT-like domain superfamily LJF99_12800 IPR001926 Pyridoxal-phosphate dependent enzyme LJF99_12800 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LJF99_12800 IPR001721 Threonine dehydratase, ACT-like domain LJF99_12805 IPR042096 Dihydroxy-acid dehydratase, C-terminal LJF99_12805 IPR004404 Dihydroxy-acid dehydratase LJF99_12805 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase LJF99_12805 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site LJF99_12805 IPR037237 IlvD/EDD, N-terminal domain LJF99_12810 IPR001544 Aminotransferase class IV LJF99_12810 IPR018300 Aminotransferase, class IV, conserved site LJF99_12810 IPR036038 Aminotransferase-like, PLP-dependent enzymes LJF99_12810 IPR005785 Branched-chain amino acid aminotransferase I LJF99_12810 IPR033939 Branched-chain aminotransferase LJF99_12815 IPR002912 ACT domain LJF99_12820 IPR012846 Acetolactate synthase, large subunit, biosynthetic LJF99_12820 IPR039368 Acetolactate synthase large subunit, TPP binding domain LJF99_12820 IPR029035 DHS-like NAD/FAD-binding domain superfamily LJF99_12820 IPR029061 Thiamin diphosphate-binding fold LJF99_12820 IPR012000 Thiamine pyrophosphate enzyme, central domain LJF99_12820 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LJF99_12820 IPR000399 TPP-binding enzyme, conserved site LJF99_12820 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LJF99_12830 IPR002123 Phospholipid/glycerol acyltransferase LJF99_12835 IPR007553 Domain of unknown function DUF523 LJF99_12845 IPR000868 Isochorismatase-like LJF99_12845 IPR036380 Isochorismatase-like superfamily LJF99_12850 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain LJF99_12850 IPR006406 Nicotinate phosphoribosyltransferase LJF99_12850 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase LJF99_12850 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal LJF99_12850 IPR007229 Nicotinate phosphoribosyltransferase family LJF99_12855 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein LJF99_12855 IPR017797 Phosphonate ABC transporter, substrate-binding protein LJF99_12860 IPR003593 AAA+ ATPase domain LJF99_12860 IPR003439 ABC transporter-like LJF99_12860 IPR017871 ABC transporter, conserved site LJF99_12860 IPR012693 ABC transporter, phosphonate import, PhnC LJF99_12860 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_12865 IPR035906 MetI-like superfamily LJF99_12865 IPR005769 ABC transporter, permease PhnE/PtxC LJF99_12870 IPR001853 DSBA-like thioredoxin domain LJF99_12870 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL LJF99_12870 IPR036249 Thioredoxin-like superfamily LJF99_12870 IPR013766 Thioredoxin domain LJF99_12875 IPR032882 SrkA/RdoA protein kinase LJF99_12875 IPR011009 Protein kinase-like domain superfamily LJF99_12875 IPR002575 Aminoglycoside phosphotransferase LJF99_12880 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_12880 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_12880 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG LJF99_12880 IPR032879 FixG, C-terminal immunoglobulin-like domain LJF99_12880 IPR013783 Immunoglobulin-like fold LJF99_12885 IPR009383 Protein of unknown function DUF1040 LJF99_12885 IPR038134 YihD-like superfamily LJF99_12890 IPR013515 Phytochrome, central region LJF99_12890 IPR029016 GAF-like domain superfamily LJF99_12890 IPR000160 GGDEF domain LJF99_12890 IPR029787 Nucleotide cyclase LJF99_12890 IPR016132 Phytochrome chromophore attachment domain LJF99_12890 IPR001294 Phytochrome LJF99_12890 IPR003018 GAF domain LJF99_12890 IPR001633 EAL domain LJF99_12890 IPR035919 EAL domain superfamily LJF99_12895 IPR000551 MerR-type HTH domain LJF99_12895 IPR009061 Putative DNA-binding domain superfamily LJF99_12895 IPR011789 Cu(I)-responsive transcriptional regulator LJF99_12900 IPR023214 HAD superfamily LJF99_12900 IPR018303 P-type ATPase, phosphorylation site LJF99_12900 IPR023299 P-type ATPase, cytoplasmic domain N LJF99_12900 IPR008250 P-type ATPase, A domain superfamily LJF99_12900 IPR023298 P-type ATPase, transmembrane domain superfamily LJF99_12900 IPR036412 HAD-like superfamily LJF99_12900 IPR017969 Heavy-metal-associated, conserved site LJF99_12900 IPR006122 Heavy metal-associated domain, copper ion-binding LJF99_12900 IPR006121 Heavy metal-associated domain, HMA LJF99_12900 IPR036163 Heavy metal-associated domain superfamily LJF99_12900 IPR027256 P-type ATPase, subfamily IB LJF99_12900 IPR001757 P-type ATPase LJF99_12905 IPR029057 Phosphoribosyltransferase-like LJF99_12905 IPR004467 Orotate phosphoribosyl transferase domain LJF99_12905 IPR023031 Orotate phosphoribosyltransferase LJF99_12905 IPR000836 Phosphoribosyltransferase domain LJF99_12910 IPR018336 Ribonuclease PH, conserved site LJF99_12910 IPR002381 Ribonuclease PH, bacterial-type LJF99_12910 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_12910 IPR027408 PNPase/RNase PH domain superfamily LJF99_12910 IPR036345 Exoribonuclease, PH domain 2 superfamily LJF99_12910 IPR015847 Exoribonuclease, phosphorolytic domain 2 LJF99_12910 IPR001247 Exoribonuclease, phosphorolytic domain 1 LJF99_12915 IPR013551 Domain of unknown function DUF1732 LJF99_12915 IPR005229 Conserved hypothetical protein CHP00255 LJF99_12915 IPR013527 YicC-like, N-terminal LJF99_12930 IPR002654 Glycosyl transferase, family 25 LJF99_12945 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LJF99_12945 IPR001296 Glycosyl transferase, family 1 LJF99_12950 IPR001509 NAD-dependent epimerase/dehydratase LJF99_12950 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase LJF99_12950 IPR036291 NAD(P)-binding domain superfamily LJF99_12955 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LJF99_12955 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LJF99_12955 IPR013571 Transcription regulator QacR, C-terminal LJF99_12955 IPR001647 DNA-binding HTH domain, TetR-type LJF99_12955 IPR009057 Homeobox-like domain superfamily LJF99_12960 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LJF99_12960 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase LJF99_12960 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_12960 IPR004839 Aminotransferase, class I/classII LJF99_12960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_12960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_12965 IPR036291 NAD(P)-binding domain superfamily LJF99_12965 IPR004627 L-threonine 3-dehydrogenase LJF99_12965 IPR011032 GroES-like superfamily LJF99_12965 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LJF99_12965 IPR013154 Alcohol dehydrogenase, N-terminal LJF99_12965 IPR013149 Alcohol dehydrogenase, C-terminal LJF99_12965 IPR020843 Polyketide synthase, enoylreductase domain LJF99_12980 IPR000212 DNA helicase, UvrD/REP type LJF99_12980 IPR013986 DExx box DNA helicase domain superfamily LJF99_12980 IPR034739 UvrD/AddA helicase, N-terminal LJF99_12980 IPR014016 UvrD-like helicase, ATP-binding domain LJF99_12980 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_12980 IPR005752 ATP-dependent DNA helicase Rep LJF99_12980 IPR014017 UvrD-like DNA helicase, C-terminal LJF99_12985 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA LJF99_12985 IPR000192 Aminotransferase class V domain LJF99_12985 IPR016454 Cysteine desulfurase LJF99_12985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_12985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_12985 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_12985 IPR010970 Cysteine desulfurase, SufS LJF99_12990 IPR003808 Fe-S metabolism associated domain, SufE-like LJF99_12990 IPR023939 Cysteine desulfuration protein SufE LJF99_12995 IPR000594 THIF-type NAD/FAD binding fold LJF99_12995 IPR035985 Ubiquitin-activating enzyme LJF99_13025 IPR026816 Flavodoxin domain LJF99_13025 IPR008254 Flavodoxin/nitric oxide synthase LJF99_13025 IPR001226 Flavodoxin, conserved site LJF99_13025 IPR029039 Flavoprotein-like superfamily LJF99_13030 IPR003445 Cation transporter LJF99_13030 IPR004772 TrkH potassium transport family LJF99_13035 IPR036956 Impact, N-terminal domain superfamily LJF99_13035 IPR035647 EF-G domain III/V-like LJF99_13035 IPR023582 Impact family LJF99_13035 IPR001498 Impact, N-terminal LJF99_13035 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_13035 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site LJF99_13035 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal LJF99_13035 IPR015796 Impact family, bacterial/archaeal LJF99_13040 IPR022846 Xaa-Pro dipeptidase LJF99_13040 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LJF99_13040 IPR000994 Peptidase M24 LJF99_13040 IPR036005 Creatinase/aminopeptidase-like LJF99_13040 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LJF99_13045 IPR020845 AMP-binding, conserved site LJF99_13045 IPR000873 AMP-dependent synthetase/ligase LJF99_13045 IPR005914 Acetoacetyl-CoA synthase LJF99_13045 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_13045 IPR042099 AMP-dependent synthetase-like superfamily LJF99_13050 IPR036291 NAD(P)-binding domain superfamily LJF99_13050 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site LJF99_13050 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LJF99_13050 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LJF99_13050 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_13050 IPR029045 ClpP/crotonase-like domain superfamily LJF99_13050 IPR001753 Enoyl-CoA hydratase/isomerase LJF99_13050 IPR012799 Fatty oxidation complex, alpha subunit FadB LJF99_13055 IPR012805 Acetyl-CoA C-acyltransferase FadA LJF99_13055 IPR002155 Thiolase LJF99_13055 IPR020615 Thiolase, acyl-enzyme intermediate active site LJF99_13055 IPR016039 Thiolase-like LJF99_13055 IPR020617 Thiolase, C-terminal LJF99_13055 IPR020613 Thiolase, conserved site LJF99_13055 IPR020616 Thiolase, N-terminal LJF99_13055 IPR020610 Thiolase, active site LJF99_13060 IPR011006 CheY-like superfamily LJF99_13060 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_13060 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_13060 IPR001789 Signal transduction response regulator, receiver domain LJF99_13060 IPR039420 Transcriptional regulatory protein WalR-like LJF99_13060 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_13065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_13065 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_13065 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_13065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_13065 IPR003660 HAMP domain LJF99_13065 IPR005467 Histidine kinase domain LJF99_13070 IPR006059 Bacterial extracellular solute-binding protein LJF99_13080 IPR036868 TusA-like domain superfamily LJF99_13080 IPR022931 Sulfur carrier protein TusA LJF99_13080 IPR001455 TusA-like domain LJF99_13085 IPR019897 RidA, conserved site LJF99_13085 IPR035959 RutC-like superfamily LJF99_13085 IPR006175 YjgF/YER057c/UK114 family LJF99_13085 IPR035709 RutC family, YoaB-like LJF99_13090 IPR039567 Glycine zipper domain LJF99_13090 IPR006664 Outer membrane protein, bacterial LJF99_13090 IPR006665 OmpA-like domain LJF99_13090 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_13090 IPR036737 OmpA-like domain superfamily LJF99_13095 IPR005019 Methyladenine glycosylase LJF99_13095 IPR011257 DNA glycosylase LJF99_13095 IPR004597 DNA-3-methyladenine glycosylase I LJF99_13100 IPR002310 Glycine-tRNA ligase, alpha subunit LJF99_13100 IPR006194 Glycine-tRNA synthetase, heterodimeric LJF99_13105 IPR008909 DALR anticodon binding LJF99_13105 IPR015944 Glycine-tRNA ligase, beta subunit LJF99_13105 IPR006194 Glycine-tRNA synthetase, heterodimeric LJF99_13110 IPR022548 Domain of unknown function DUF2846 LJF99_13110 IPR016596 Protein of unknown function UCP012335 LJF99_13115 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13115 IPR031322 Shikimate kinase/gluconokinase LJF99_13115 IPR000623 Shikimate kinase/Threonine synthase-like 1 LJF99_13115 IPR023000 Shikimate kinase, conserved site LJF99_13125 IPR000014 PAS domain LJF99_13125 IPR035965 PAS domain superfamily LJF99_13125 IPR000700 PAS-associated, C-terminal LJF99_13125 IPR001610 PAC motif LJF99_13125 IPR012226 Diguanylate cyclase/phosphodiesterase LJF99_13125 IPR000160 GGDEF domain LJF99_13125 IPR035919 EAL domain superfamily LJF99_13125 IPR001633 EAL domain LJF99_13125 IPR029787 Nucleotide cyclase LJF99_13130 IPR003540 ADP ribosyltransferase LJF99_13130 IPR003537 Yersinia virulence determinant YopE LJF99_13130 IPR014773 Virulence factor YopE, GAP domain LJF99_13130 IPR037168 Virulence factor YopE, GAP domain superfamily LJF99_13135 IPR005416 Type III secretion chaperone SycE LJF99_13135 IPR010261 Tir chaperone protein (CesT) family LJF99_13140 IPR013059 Tryptophan/tyrosine transporter LJF99_13140 IPR013061 Tryptophan/tryrosine permease, conserved site LJF99_13140 IPR018227 Amino acid/polyamine transporter 2 LJF99_13145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_13145 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_13155 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_13155 IPR023753 FAD/NAD(P)-binding domain LJF99_13155 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase LJF99_13155 IPR041364 Rubredoxin binding domain LJF99_13160 IPR024934 Rubredoxin-like domain LJF99_13160 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LJF99_13160 IPR024935 Rubredoxin domain LJF99_13160 IPR029039 Flavoprotein-like superfamily LJF99_13160 IPR008254 Flavodoxin/nitric oxide synthase LJF99_13160 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin LJF99_13160 IPR001279 Metallo-beta-lactamase LJF99_13165 IPR003593 AAA+ ATPase domain LJF99_13165 IPR003018 GAF domain LJF99_13165 IPR029016 GAF-like domain superfamily LJF99_13165 IPR009057 Homeobox-like domain superfamily LJF99_13165 IPR023944 Anaerobic nitric oxide reductase transcription regulator LJF99_13165 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13165 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_13165 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_13165 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_13165 IPR025944 Sigma-54 interaction domain, conserved site LJF99_13170 IPR036390 Winged helix DNA-binding domain superfamily LJF99_13170 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13170 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LJF99_13170 IPR000524 Transcription regulator HTH, GntR LJF99_13170 IPR011663 UbiC transcription regulator-associated LJF99_13175 IPR036878 Glucose permease domain IIB LJF99_13175 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LJF99_13175 IPR003352 Phosphotransferase system, EIIC LJF99_13175 IPR013013 Phosphotransferase system, EIIC component, type 1 LJF99_13175 IPR001996 Phosphotransferase system, IIB component, type 1 LJF99_13175 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component LJF99_13175 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LJF99_13180 IPR036291 NAD(P)-binding domain superfamily LJF99_13180 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LJF99_13180 IPR019802 Glycoside hydrolase, family 4, conserved site LJF99_13180 IPR001088 Glycoside hydrolase, family 4 LJF99_13180 IPR022616 Glycosyl hydrolase, family 4, C-terminal LJF99_13185 IPR000843 LacI-type HTH domain LJF99_13185 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_13185 IPR028082 Periplasmic binding protein-like I LJF99_13185 IPR023588 Transcription regulator HTH, PurR LJF99_13190 IPR028081 Leucine-binding protein domain LJF99_13190 IPR000709 Leu/Ile/Val-binding protein LJF99_13190 IPR028082 Periplasmic binding protein-like I LJF99_13195 IPR001851 ABC transporter, permease LJF99_13200 IPR001851 ABC transporter, permease LJF99_13200 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal LJF99_13205 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13205 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LJF99_13205 IPR017871 ABC transporter, conserved site LJF99_13205 IPR003593 AAA+ ATPase domain LJF99_13205 IPR003439 ABC transporter-like LJF99_13210 IPR003593 AAA+ ATPase domain LJF99_13210 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein LJF99_13210 IPR003439 ABC transporter-like LJF99_13210 IPR017871 ABC transporter, conserved site LJF99_13210 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13220 IPR001123 Amino acid exporter protein, LeuE-type LJF99_13225 IPR001763 Rhodanese-like domain LJF99_13225 IPR036873 Rhodanese-like domain superfamily LJF99_13225 IPR023695 Thiosulfate sulfurtransferase, bacterial LJF99_13230 IPR023662 Rhomboid protease GlpG LJF99_13230 IPR035952 Rhomboid-like superfamily LJF99_13230 IPR022764 Peptidase S54, rhomboid domain LJF99_13230 IPR038236 GlpG peptidase, N-terminal domain superfamily LJF99_13230 IPR022732 Peptidase S54, GlpG peptidase, N-terminal LJF99_13235 IPR025920 Bacterial virulence factor lipase, N-terminal domain LJF99_13240 IPR007475 Ubiquinone biosynthesis accessory factor UbiK LJF99_13245 IPR017927 FAD-binding domain, ferredoxin reductase-type LJF99_13245 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LJF99_13245 IPR001433 Oxidoreductase FAD/NAD(P)-binding LJF99_13245 IPR017938 Riboflavin synthase-like beta-barrel LJF99_13250 IPR002830 UbiD decarboxylyase family LJF99_13250 IPR023677 UbiD decarboxylyase, bacteria LJF99_13260 IPR004665 Transcription termination factor Rho LJF99_13260 IPR011113 Rho termination factor, RNA-binding domain LJF99_13260 IPR036269 Rho termination factor, N-terminal domain superfamily LJF99_13260 IPR011112 Rho termination factor, N-terminal LJF99_13260 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13260 IPR012340 Nucleic acid-binding, OB-fold LJF99_13260 IPR011129 Cold shock domain LJF99_13260 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LJF99_13260 IPR003593 AAA+ ATPase domain LJF99_13260 IPR041703 Transcription termination factor Rho, ATP binding domain LJF99_13265 IPR005746 Thioredoxin LJF99_13265 IPR036249 Thioredoxin-like superfamily LJF99_13265 IPR017937 Thioredoxin, conserved site LJF99_13265 IPR013766 Thioredoxin domain LJF99_13270 IPR023554 ATP-dependent RNA helicase RhlB type LJF99_13270 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_13270 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_13270 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_13270 IPR001650 Helicase, C-terminal LJF99_13270 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13270 IPR011545 DEAD/DEAH box helicase domain LJF99_13275 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase LJF99_13275 IPR003695 Ppx/GppA phosphatase LJF99_13275 IPR030673 Pyrophosphatase, GppA/Ppx-type LJF99_13285 IPR007536 Ribosomal RNA small subunit methyltransferase J LJF99_13285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_13290 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_13295 IPR005330 MHYT domain LJF99_13295 IPR029787 Nucleotide cyclase LJF99_13295 IPR035919 EAL domain superfamily LJF99_13295 IPR001633 EAL domain LJF99_13295 IPR000160 GGDEF domain LJF99_13300 IPR001567 Peptidase M3A/M3B catalytic domain LJF99_13300 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LJF99_13305 IPR001731 Delta-aminolevulinic acid dehydratase LJF99_13305 IPR030656 Delta-aminolevulinic acid dehydratase, active site LJF99_13305 IPR013785 Aldolase-type TIM barrel LJF99_13310 IPR018228 Deoxyribonuclease, TatD-related, conserved site LJF99_13310 IPR024918 3'-5' ssDNA/RNA exonuclease TatD LJF99_13310 IPR032466 Metal-dependent hydrolase LJF99_13310 IPR001130 TatD family LJF99_13315 IPR002033 Sec-independent periplasmic protein translocase TatC LJF99_13315 IPR019820 Sec-independent periplasmic protein translocase, conserved site LJF99_13320 IPR003369 Sec-independent protein translocase protein TatA/B/E LJF99_13320 IPR018448 Twin-arginine translocation protein TatB LJF99_13325 IPR003369 Sec-independent protein translocase protein TatA/B/E LJF99_13325 IPR006312 Sec-independent protein translocase protein TatA/E LJF99_13330 IPR011009 Protein kinase-like domain superfamily LJF99_13330 IPR010232 Probable protein kinase UbiB LJF99_13330 IPR004147 UbiB domain LJF99_13335 IPR003033 SCP2 sterol-binding domain LJF99_13335 IPR036527 SCP2 sterol-binding domain superfamily LJF99_13335 IPR038989 Ubiquinone biosynthesis protein UbiJ LJF99_13340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_13340 IPR004033 UbiE/COQ5 methyltransferase LJF99_13340 IPR023576 UbiE/COQ5 methyltransferase, conserved site LJF99_13345 IPR003691 Putative fluoride ion transporter CrcB LJF99_13390 IPR006260 TonB/TolA, C-terminal LJF99_13390 IPR037682 TonB, C-terminal LJF99_13390 IPR003538 Gram-negative bacterial TonB protein LJF99_13395 IPR003400 Biopolymer transport protein ExbD/TolR LJF99_13400 IPR002898 MotA/TolQ/ExbB proton channel LJF99_13405 IPR002898 MotA/TolQ/ExbB proton channel LJF99_13415 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_13415 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LJF99_13415 IPR000792 Transcription regulator LuxR, C-terminal LJF99_13415 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13415 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily LJF99_13430 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily LJF99_13430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_13430 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_13430 IPR003356 DNA methylase, adenine-specific LJF99_13435 IPR025959 Winged helix-turn helix domain LJF99_13435 IPR009057 Homeobox-like domain superfamily LJF99_13435 IPR012337 Ribonuclease H-like superfamily LJF99_13435 IPR038717 Tc1-like transposase, DDE domain LJF99_13440 IPR000055 Restriction endonuclease, type I, HsdS LJF99_13445 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_13445 IPR002611 IstB-like ATP-binding protein LJF99_13445 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13445 IPR003593 AAA+ ATPase domain LJF99_13450 IPR012337 Ribonuclease H-like superfamily LJF99_13450 IPR036397 Ribonuclease H superfamily LJF99_13450 IPR001584 Integrase, catalytic core LJF99_13450 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_13455 IPR000055 Restriction endonuclease, type I, HsdS LJF99_13475 IPR009492 TniQ LJF99_13475 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl LJF99_13485 IPR009492 TniQ LJF99_13485 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl LJF99_13490 IPR021542 Tn7 transposition regulator TnsC LJF99_13490 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13490 IPR003593 AAA+ ATPase domain LJF99_13495 IPR003593 AAA+ ATPase domain LJF99_13495 IPR021542 Tn7 transposition regulator TnsC LJF99_13495 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13500 IPR036397 Ribonuclease H superfamily LJF99_13500 IPR001584 Integrase, catalytic core LJF99_13500 IPR012337 Ribonuclease H-like superfamily LJF99_13505 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13505 IPR036390 Winged helix DNA-binding domain superfamily LJF99_13505 IPR014833 TnsA endonuclease, N-terminal LJF99_13505 IPR014832 TnsA endonuclease C-terminal LJF99_13505 IPR011335 Restriction endonuclease type II-like LJF99_13505 IPR011856 tRNA endonuclease-like domain superfamily LJF99_13510 IPR035490 GlmS/FrlB, SIS domain 2 LJF99_13510 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising LJF99_13510 IPR029055 Nucleophile aminohydrolases, N-terminal LJF99_13510 IPR017932 Glutamine amidotransferase type 2 domain LJF99_13510 IPR001347 Sugar isomerase (SIS) LJF99_13510 IPR035466 GlmS/AgaS, SIS domain 1 LJF99_13515 IPR036390 Winged helix DNA-binding domain superfamily LJF99_13515 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13515 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LJF99_13515 IPR037171 NagB/RpiA transferase-like LJF99_13515 IPR001034 DeoR-type HTH domain LJF99_13515 IPR014036 DeoR C-terminal sensor domain LJF99_13520 IPR039420 Transcriptional regulatory protein WalR-like LJF99_13520 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13520 IPR001789 Signal transduction response regulator, receiver domain LJF99_13520 IPR011006 CheY-like superfamily LJF99_13520 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_13520 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_13525 IPR005467 Histidine kinase domain LJF99_13525 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_13525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_13525 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_13525 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_13525 IPR003660 HAMP domain LJF99_13525 IPR029151 Periplasmic sensor-like domain superfamily LJF99_13525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_13535 IPR010364 Uncharacterised protein family, inner membrane CreD LJF99_13540 IPR038009 GlmU, C-terminal LbH domain LJF99_13540 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase LJF99_13540 IPR001451 Hexapeptide repeat LJF99_13540 IPR018357 Hexapeptide transferase, conserved site LJF99_13540 IPR011004 Trimeric LpxA-like superfamily LJF99_13540 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_13540 IPR025877 MobA-like NTP transferase LJF99_13545 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LJF99_13545 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit LJF99_13545 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal LJF99_13545 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal LJF99_13545 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily LJF99_13550 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal LJF99_13550 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LJF99_13550 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily LJF99_13550 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LJF99_13550 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LJF99_13550 IPR005722 ATP synthase, F1 complex, beta subunit LJF99_13550 IPR003593 AAA+ ATPase domain LJF99_13550 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13555 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily LJF99_13555 IPR000131 ATP synthase, F1 complex, gamma subunit LJF99_13555 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site LJF99_13560 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LJF99_13560 IPR000793 ATP synthase, alpha subunit, C-terminal LJF99_13560 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily LJF99_13560 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LJF99_13560 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LJF99_13560 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily LJF99_13560 IPR005294 ATP synthase, F1 complex, alpha subunit LJF99_13560 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LJF99_13560 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13560 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain LJF99_13565 IPR020781 ATPase, OSCP/delta subunit, conserved site LJF99_13565 IPR000711 ATPase, OSCP/delta subunit LJF99_13565 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily LJF99_13570 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily LJF99_13570 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast LJF99_13570 IPR005864 ATP synthase, F0 complex, subunit b, bacterial LJF99_13575 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site LJF99_13575 IPR035921 F/V-ATP synthase subunit C superfamily LJF99_13575 IPR002379 V-ATPase proteolipid subunit C-like domain LJF99_13575 IPR038662 F1F0 ATP synthase subunit C superfamily LJF99_13575 IPR000454 ATP synthase, F0 complex, subunit C LJF99_13575 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast LJF99_13580 IPR035908 ATP synthase, F0 complex, subunit A superfamily LJF99_13580 IPR023011 ATP synthase, F0 complex, subunit A, active site LJF99_13580 IPR000568 ATP synthase, F0 complex, subunit A LJF99_13585 IPR005598 ATP synthase protein I LJF99_13590 IPR004437 ParB/RepB/Spo0J partition protein LJF99_13590 IPR041468 ParB/Spo0J, HTH domain LJF99_13590 IPR036086 ParB/Sulfiredoxin superfamily LJF99_13590 IPR003115 ParB/Sulfiredoxin LJF99_13595 IPR025669 AAA domain LJF99_13595 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13600 IPR003682 rRNA small subunit methyltransferase G LJF99_13600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_13605 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_13605 IPR026904 GidA associated domain 3 LJF99_13605 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG LJF99_13605 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related LJF99_13605 IPR020595 MnmG-related, conserved site LJF99_13610 IPR029039 Flavoprotein-like superfamily LJF99_13610 IPR008254 Flavodoxin/nitric oxide synthase LJF99_13615 IPR010105 TonB-dependent siderophore receptor LJF99_13615 IPR012910 TonB-dependent receptor, plug domain LJF99_13615 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_13615 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_13615 IPR010916 TonB box, conserved site LJF99_13615 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_13615 IPR039423 TonB-dependent receptor-like LJF99_13620 IPR005898 Cyclic peptide transporter LJF99_13620 IPR003439 ABC transporter-like LJF99_13620 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13620 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_13620 IPR011527 ABC transporter type 1, transmembrane domain LJF99_13620 IPR003593 AAA+ ATPase domain LJF99_13620 IPR017871 ABC transporter, conserved site LJF99_13625 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13625 IPR017871 ABC transporter, conserved site LJF99_13625 IPR003439 ABC transporter-like LJF99_13625 IPR003593 AAA+ ATPase domain LJF99_13630 IPR002491 ABC transporter periplasmic binding domain LJF99_13635 IPR037294 ABC transporter, BtuC-like LJF99_13635 IPR000522 ABC transporter, permease protein, BtuC-like LJF99_13640 IPR039423 TonB-dependent receptor-like LJF99_13640 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_13640 IPR010916 TonB box, conserved site LJF99_13640 IPR012910 TonB-dependent receptor, plug domain LJF99_13640 IPR030149 TonB-dependent siderophore receptor FcuA/FatA LJF99_13640 IPR010105 TonB-dependent siderophore receptor LJF99_13640 IPR010917 TonB-dependent receptor, conserved site LJF99_13640 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_13640 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_13645 IPR002491 ABC transporter periplasmic binding domain LJF99_13645 IPR033870 FatB domain LJF99_13650 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13650 IPR017871 ABC transporter, conserved site LJF99_13650 IPR003439 ABC transporter-like LJF99_13650 IPR003593 AAA+ ATPase domain LJF99_13655 IPR037294 ABC transporter, BtuC-like LJF99_13655 IPR000522 ABC transporter, permease protein, BtuC-like LJF99_13660 IPR037294 ABC transporter, BtuC-like LJF99_13660 IPR000522 ABC transporter, permease protein, BtuC-like LJF99_13665 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13665 IPR017871 ABC transporter, conserved site LJF99_13665 IPR003439 ABC transporter-like LJF99_13665 IPR011527 ABC transporter type 1, transmembrane domain LJF99_13665 IPR003593 AAA+ ATPase domain LJF99_13665 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_13670 IPR011527 ABC transporter type 1, transmembrane domain LJF99_13670 IPR017871 ABC transporter, conserved site LJF99_13670 IPR003439 ABC transporter-like LJF99_13670 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_13670 IPR003593 AAA+ ATPase domain LJF99_13670 IPR007037 Siderophore-interacting protein, C-terminal domain LJF99_13670 IPR017927 FAD-binding domain, ferredoxin reductase-type LJF99_13670 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LJF99_13670 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13670 IPR017938 Riboflavin synthase-like beta-barrel LJF99_13670 IPR013113 FAD-binding 9, siderophore-interacting LJF99_13680 IPR036736 ACP-like superfamily LJF99_13680 IPR010071 Amino acid adenylation domain LJF99_13680 IPR029058 Alpha/Beta hydrolase fold LJF99_13680 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_13680 IPR042099 AMP-dependent synthetase-like superfamily LJF99_13680 IPR000873 AMP-dependent synthetase/ligase LJF99_13680 IPR020845 AMP-binding, conserved site LJF99_13680 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_13680 IPR001242 Condensation domain LJF99_13680 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LJF99_13680 IPR020802 Polyketide synthase, thioesterase domain LJF99_13680 IPR009081 Phosphopantetheine binding ACP domain LJF99_13680 IPR001031 Thioesterase LJF99_13685 IPR031043 Putative histamine N-monooxygenase LJF99_13685 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase LJF99_13685 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_13690 IPR006162 Phosphopantetheine attachment site LJF99_13690 IPR010071 Amino acid adenylation domain LJF99_13690 IPR029058 Alpha/Beta hydrolase fold LJF99_13690 IPR036736 ACP-like superfamily LJF99_13690 IPR020845 AMP-binding, conserved site LJF99_13690 IPR000873 AMP-dependent synthetase/ligase LJF99_13690 IPR042099 AMP-dependent synthetase-like superfamily LJF99_13690 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_13690 IPR001242 Condensation domain LJF99_13690 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LJF99_13690 IPR009081 Phosphopantetheine binding ACP domain LJF99_13700 IPR002129 Pyridoxal phosphate-dependent decarboxylase LJF99_13700 IPR023523 Histidine decarboxylase, bacteria LJF99_13700 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_13700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_13700 IPR021115 Pyridoxal-phosphate binding site LJF99_13705 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 LJF99_13705 IPR005225 Small GTP-binding protein domain LJF99_13705 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13705 IPR025867 MnmE, helical domain LJF99_13705 IPR027368 tRNA modification GTPase MnmE domain 2 LJF99_13705 IPR004520 tRNA modification GTPase MnmE LJF99_13705 IPR006073 GTP binding domain LJF99_13705 IPR018948 GTP-binding protein TrmE, N-terminal LJF99_13705 IPR031168 TrmE-type guanine nucleotide-binding domain LJF99_13710 IPR038210 Membrane insertase YidC, periplasmic domain LJF99_13710 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 LJF99_13710 IPR038221 YidC, periplasmic domain superfamily LJF99_13710 IPR028053 Membrane insertase YidC, N-terminal LJF99_13710 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LJF99_13710 IPR019998 Membrane insertase YidC LJF99_13715 IPR002696 Putative membrane protein insertion efficiency factor LJF99_13720 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_13720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_13720 IPR000100 Ribonuclease P LJF99_13720 IPR020539 Ribonuclease P, conserved site LJF99_13725 IPR000271 Ribosomal protein L34 LJF99_13725 IPR020939 Ribosomal protein L34, conserved site LJF99_13730 IPR003593 AAA+ ATPase domain LJF99_13730 IPR003439 ABC transporter-like LJF99_13730 IPR017871 ABC transporter, conserved site LJF99_13730 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13730 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LJF99_13735 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_13735 IPR035906 MetI-like superfamily LJF99_13735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_13740 IPR001320 Ionotropic glutamate receptor LJF99_13740 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_13740 IPR018313 Solute-binding protein family 3, conserved site LJF99_13745 IPR013159 Chromosomal replication initiator, DnaA C-terminal LJF99_13745 IPR003593 AAA+ ATPase domain LJF99_13745 IPR001957 Chromosomal replication control, initiator DnaA LJF99_13745 IPR020591 Chromosomal replication control, initiator DnaA-like LJF99_13745 IPR018312 Chromosomal replication control, initiator DnaA, conserved site LJF99_13745 IPR013317 Chromosomal replication initiator protein DnaA LJF99_13745 IPR010921 Trp repressor/replication initiator LJF99_13745 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13745 IPR038454 DnaA, N-terminal domain superfamily LJF99_13745 IPR024633 DnaA N-terminal domain LJF99_13750 IPR022637 DNA polymerase III, beta sliding clamp, central LJF99_13750 IPR001001 DNA polymerase III, beta sliding clamp LJF99_13750 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal LJF99_13750 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal LJF99_13755 IPR003395 RecF/RecN/SMC, N-terminal LJF99_13755 IPR042174 DNA-binding RecF, domain 2 LJF99_13755 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13755 IPR018078 DNA-binding, RecF, conserved site LJF99_13755 IPR001238 DNA-binding, RecF LJF99_13760 IPR001241 DNA topoisomerase, type IIA LJF99_13760 IPR002288 DNA gyrase B subunit, C-terminal LJF99_13760 IPR011557 DNA gyrase, subunit B LJF99_13760 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LJF99_13760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_13760 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal LJF99_13760 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 LJF99_13760 IPR018522 DNA topoisomerase, type IIA, conserved site LJF99_13760 IPR006171 TOPRIM domain LJF99_13760 IPR034160 DNA gyrase subunit B, TOPRIM domain LJF99_13760 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_13760 IPR041423 DNA gyrase subunit B insert domain LJF99_13760 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_13760 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_13775 IPR001034 DeoR-type HTH domain LJF99_13775 IPR028349 Protein PafC LJF99_13775 IPR026881 WYL domain LJF99_13775 IPR036390 Winged helix DNA-binding domain superfamily LJF99_13775 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13775 IPR013196 Helix-turn-helix, type 11 LJF99_13780 IPR023728 Small heat shock protein IbpA LJF99_13780 IPR008978 HSP20-like chaperone LJF99_13780 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain LJF99_13780 IPR002068 Alpha crystallin/Hsp20 domain LJF99_13785 IPR023728 Small heat shock protein IbpA LJF99_13785 IPR008978 HSP20-like chaperone LJF99_13785 IPR002068 Alpha crystallin/Hsp20 domain LJF99_13785 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain LJF99_13805 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_13805 IPR004839 Aminotransferase, class I/classII LJF99_13805 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_13830 IPR011006 CheY-like superfamily LJF99_13830 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_13830 IPR001789 Signal transduction response regulator, receiver domain LJF99_13830 IPR039420 Transcriptional regulatory protein WalR-like LJF99_13830 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13835 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal LJF99_13835 IPR003018 GAF domain LJF99_13835 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_13835 IPR005467 Histidine kinase domain LJF99_13835 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_13835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_13835 IPR038318 KdpD, transmembrane domain superfamily LJF99_13835 IPR025201 Sensor protein KdpD, transmembrane domain LJF99_13835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_13835 IPR029016 GAF-like domain superfamily LJF99_13835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_13840 IPR003820 Potassium-transporting ATPase C chain LJF99_13845 IPR036412 HAD-like superfamily LJF99_13845 IPR006391 P-type ATPase, B chain, subfamily IA LJF99_13845 IPR008250 P-type ATPase, A domain superfamily LJF99_13845 IPR023298 P-type ATPase, transmembrane domain superfamily LJF99_13845 IPR023214 HAD superfamily LJF99_13845 IPR018303 P-type ATPase, phosphorylation site LJF99_13845 IPR023299 P-type ATPase, cytoplasmic domain N LJF99_13845 IPR001757 P-type ATPase LJF99_13850 IPR004623 Potassium-transporting ATPase A chain LJF99_13855 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJF99_13855 IPR006322 Glutathione reductase, eukaryote/bacterial LJF99_13855 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LJF99_13855 IPR023753 FAD/NAD(P)-binding domain LJF99_13855 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LJF99_13855 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LJF99_13855 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_13860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_13860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_13860 IPR005467 Histidine kinase domain LJF99_13860 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_13860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_13860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_13860 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_13865 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LJF99_13865 IPR001036 Acriflavin resistance protein LJF99_13870 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_13870 IPR006143 RND efflux pump, membrane fusion protein LJF99_13875 IPR001647 DNA-binding HTH domain, TetR-type LJF99_13875 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LJF99_13875 IPR009057 Homeobox-like domain superfamily LJF99_13905 IPR036412 HAD-like superfamily LJF99_13905 IPR000150 Cof family LJF99_13905 IPR006379 HAD-superfamily hydrolase, subfamily IIB LJF99_13905 IPR023214 HAD superfamily LJF99_13910 IPR029058 Alpha/Beta hydrolase fold LJF99_13910 IPR022742 Serine aminopeptidase, S33 LJF99_13915 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LJF99_13915 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase LJF99_13915 IPR001537 tRNA/rRNA methyltransferase, SpoU type LJF99_13915 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal LJF99_13915 IPR029028 Alpha/beta knot methyltransferases LJF99_13920 IPR012675 Beta-grasp domain superfamily LJF99_13920 IPR004811 RelA/SpoT family LJF99_13920 IPR004095 TGS LJF99_13920 IPR012676 TGS-like LJF99_13920 IPR033655 RelA, TGS domain LJF99_13920 IPR002912 ACT domain LJF99_13920 IPR007685 RelA/SpoT LJF99_13920 IPR003607 HD/PDEase domain LJF99_13925 IPR006110 RNA polymerase, subunit omega/K/RPB6 LJF99_13925 IPR036161 RPB6/omega subunit-like superfamily LJF99_13925 IPR003716 DNA-directed RNA polymerase, omega subunit LJF99_13925 IPR012293 RNA polymerase subunit, RPB6/omega LJF99_13930 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_13930 IPR020590 Guanylate kinase, conserved site LJF99_13930 IPR017665 Guanylate kinase LJF99_13930 IPR008144 Guanylate kinase-like domain LJF99_13930 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LJF99_13935 IPR002201 Glycosyl transferase, family 9 LJF99_13940 IPR000719 Protein kinase domain LJF99_13940 IPR011009 Protein kinase-like domain superfamily LJF99_13940 IPR022826 3-deoxy-D-manno-octulosonic acid kinase LJF99_13950 IPR000620 EamA domain LJF99_13950 IPR004779 Carboxylate/Amino Acid/Amine Transporter LJF99_13970 IPR005119 LysR, substrate-binding LJF99_13970 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_13970 IPR036390 Winged helix DNA-binding domain superfamily LJF99_13970 IPR037416 Nodulation protein D, PBP2 LJF99_13970 IPR000847 Transcription regulator HTH, LysR LJF99_13975 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_13975 IPR002305 Aminoacyl-tRNA synthetase, class Ic LJF99_13975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_13975 IPR002306 Tryptophan-tRNA ligase LJF99_13975 IPR024109 Tryptophan-tRNA ligase, bacterial-type LJF99_13980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_13980 IPR006015 Universal stress protein A family LJF99_13980 IPR006016 UspA LJF99_13985 IPR024906 Enoyl reductase FAD binding domain LJF99_13985 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative LJF99_13985 IPR036291 NAD(P)-binding domain superfamily LJF99_13985 IPR010758 Trans-2-enoyl-CoA reductase LJF99_13990 IPR029787 Nucleotide cyclase LJF99_13990 IPR000700 PAS-associated, C-terminal LJF99_13990 IPR000160 GGDEF domain LJF99_13990 IPR000014 PAS domain LJF99_13990 IPR035965 PAS domain superfamily LJF99_13990 IPR013656 PAS fold-4 LJF99_14000 IPR041719 Ferritin, prokaryotic-type LJF99_14000 IPR008331 Ferritin/DPS protein domain LJF99_14000 IPR009040 Ferritin-like diiron domain LJF99_14000 IPR012347 Ferritin-like LJF99_14000 IPR001519 Ferritin LJF99_14000 IPR009078 Ferritin-like superfamily LJF99_14005 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like LJF99_14005 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_14005 IPR023166 HI0933-like insert domain superfamily LJF99_14010 IPR001123 Amino acid exporter protein, LeuE-type LJF99_14020 IPR008962 PapD-like superfamily LJF99_14020 IPR013783 Immunoglobulin-like fold LJF99_14035 IPR008969 Carboxypeptidase-like, regulatory domain superfamily LJF99_14035 IPR031917 Pilus assembly protein, C-terminal domain LJF99_14035 IPR032636 Pilus assembly protein, E-set like domain LJF99_14055 IPR001584 Integrase, catalytic core LJF99_14055 IPR012337 Ribonuclease H-like superfamily LJF99_14055 IPR036397 Ribonuclease H superfamily LJF99_14055 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_14060 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_14060 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_14060 IPR002611 IstB-like ATP-binding protein LJF99_14060 IPR003593 AAA+ ATPase domain LJF99_14065 IPR040695 EcpB, C-terminal LJF99_14065 IPR008962 PapD-like superfamily LJF99_14070 IPR016514 Fimbrial protein EcpA LJF99_14070 IPR038478 Fimbrillin subunit EcpA superfamily LJF99_14075 IPR011006 CheY-like superfamily LJF99_14075 IPR000792 Transcription regulator LuxR, C-terminal LJF99_14075 IPR001789 Signal transduction response regulator, receiver domain LJF99_14080 IPR011006 CheY-like superfamily LJF99_14080 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_14080 IPR013767 PAS fold LJF99_14080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_14080 IPR005467 Histidine kinase domain LJF99_14080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_14080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_14080 IPR036641 HPT domain superfamily LJF99_14080 IPR000014 PAS domain LJF99_14080 IPR000700 PAS-associated, C-terminal LJF99_14080 IPR035965 PAS domain superfamily LJF99_14080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_14080 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_14080 IPR001789 Signal transduction response regulator, receiver domain LJF99_14080 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_14090 IPR013767 PAS fold LJF99_14090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_14090 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_14090 IPR001789 Signal transduction response regulator, receiver domain LJF99_14090 IPR035965 PAS domain superfamily LJF99_14090 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_14090 IPR000700 PAS-associated, C-terminal LJF99_14090 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_14090 IPR036641 HPT domain superfamily LJF99_14090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_14090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_14090 IPR005467 Histidine kinase domain LJF99_14090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_14090 IPR011006 CheY-like superfamily LJF99_14090 IPR000014 PAS domain LJF99_14100 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LJF99_14100 IPR010559 Signal transduction histidine kinase, internal region LJF99_14100 IPR029016 GAF-like domain superfamily LJF99_14100 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_14100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_14105 IPR011006 CheY-like superfamily LJF99_14105 IPR007492 LytTR DNA-binding domain LJF99_14105 IPR001789 Signal transduction response regulator, receiver domain LJF99_14110 IPR011701 Major facilitator superfamily LJF99_14110 IPR020846 Major facilitator superfamily domain LJF99_14110 IPR036259 MFS transporter superfamily LJF99_14110 IPR004741 Oxalate/formate antiporter family transporter LJF99_14115 IPR011054 Rudiment single hybrid motif LJF99_14115 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain LJF99_14115 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit LJF99_14115 IPR013815 ATP-grasp fold, subdomain 1 LJF99_14115 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LJF99_14115 IPR011761 ATP-grasp fold LJF99_14115 IPR016185 Pre-ATP-grasp domain superfamily LJF99_14120 IPR033747 Class I PurE LJF99_14120 IPR000031 PurE domain LJF99_14120 IPR024694 PurE, prokaryotic type LJF99_14120 IPR035893 PurE domain superfamily LJF99_14135 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14135 IPR005119 LysR, substrate-binding LJF99_14135 IPR000847 Transcription regulator HTH, LysR LJF99_14135 IPR036390 Winged helix DNA-binding domain superfamily LJF99_14140 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_14140 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_14140 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_14140 IPR012910 TonB-dependent receptor, plug domain LJF99_14140 IPR039426 Vitamin B12 transporter BtuB-like LJF99_14140 IPR010101 TonB-dependent vitamin B12 transporter BtuB LJF99_14145 IPR015942 Asp/Glu/hydantoin racemase LJF99_14145 IPR001920 Asp/Glu racemase LJF99_14145 IPR018187 Asp/Glu racemase, active site 1 LJF99_14145 IPR033134 Asp/Glu racemase, active site 2 LJF99_14145 IPR004391 Glutamate racemase LJF99_14175 IPR016102 Succinyl-CoA synthetase-like LJF99_14175 IPR036291 NAD(P)-binding domain superfamily LJF99_14175 IPR000182 GNAT domain LJF99_14175 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain LJF99_14175 IPR013815 ATP-grasp fold, subdomain 1 LJF99_14175 IPR011761 ATP-grasp fold LJF99_14175 IPR003781 CoA-binding LJF99_14175 IPR016181 Acyl-CoA N-acyltransferase LJF99_14190 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14190 IPR000847 Transcription regulator HTH, LysR LJF99_14190 IPR036390 Winged helix DNA-binding domain superfamily LJF99_14190 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain LJF99_14190 IPR005119 LysR, substrate-binding LJF99_14195 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_14195 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LJF99_14195 IPR013023 Ketol-acid reductoisomerase LJF99_14195 IPR000506 Ketol-acid reductoisomerase, C-terminal LJF99_14195 IPR013116 Ketol-acid reductoisomerase, N-terminal LJF99_14195 IPR036291 NAD(P)-binding domain superfamily LJF99_14200 IPR035482 Phosphoglucose isomerase, SIS domain 2 LJF99_14200 IPR035476 Phosphoglucose isomerase, SIS domain 1 LJF99_14200 IPR018189 Phosphoglucose isomerase, conserved site LJF99_14200 IPR023096 Phosphoglucose isomerase, C-terminal LJF99_14200 IPR001672 Phosphoglucose isomerase (PGI) LJF99_14210 IPR010920 LSM domain superfamily LJF99_14210 IPR006685 Mechanosensitive ion channel MscS LJF99_14210 IPR011066 Mechanosensitive ion channel MscS, C-terminal LJF99_14210 IPR006686 Mechanosensitive ion channel MscS, conserved site LJF99_14210 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LJF99_14210 IPR023408 Mechanosensitive ion channel MscS domain superfamily LJF99_14210 IPR008910 Conserved TM helix LJF99_14215 IPR001647 DNA-binding HTH domain, TetR-type LJF99_14215 IPR009057 Homeobox-like domain superfamily LJF99_14215 IPR023769 Nucleoid occlusion factor SlmA LJF99_14220 IPR029054 dUTPase-like LJF99_14220 IPR036157 dUTPase-like superfamily LJF99_14220 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase LJF99_14220 IPR033704 dUTPase, trimeric LJF99_14225 IPR035929 CoaB-like superfamily LJF99_14225 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC LJF99_14225 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal LJF99_14225 IPR036551 Flavin prenyltransferase-like LJF99_14225 IPR003382 Flavoprotein LJF99_14230 IPR001405 Uncharacterised protein family UPF0758 LJF99_14230 IPR037518 MPN domain LJF99_14230 IPR025657 RadC-like JAB domain LJF99_14230 IPR010994 RuvA domain 2-like LJF99_14230 IPR020891 Uncharacterised protein family UPF0758, conserved site LJF99_14235 IPR026569 Ribosomal protein L28/L24 LJF99_14235 IPR034704 L28p-like LJF99_14235 IPR001383 Ribosomal protein L28 LJF99_14235 IPR037147 Ribosomal protein L28/L24 superfamily LJF99_14240 IPR018264 Ribosomal protein L33, conserved site LJF99_14240 IPR011332 Zinc-binding ribosomal protein LJF99_14240 IPR001705 Ribosomal protein L33 LJF99_14240 IPR038584 Ribosomal protein L33 superfamily LJF99_14250 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site LJF99_14250 IPR020629 Formamidopyrimidine-DNA glycosylase LJF99_14250 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain LJF99_14250 IPR035937 MutM-like, N-terminal LJF99_14250 IPR010979 Ribosomal protein S13-like, H2TH LJF99_14250 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type LJF99_14250 IPR010663 Zinc finger, FPG/IleRS-type LJF99_14250 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding LJF99_14255 IPR007488 Protein of unknown function DUF535 LJF99_14260 IPR004821 Cytidyltransferase-like domain LJF99_14260 IPR001980 Phosphopantetheine adenylyltransferase LJF99_14260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_14265 IPR002201 Glycosyl transferase, family 9 LJF99_14270 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_14270 IPR001173 Glycosyltransferase 2-like LJF99_14275 IPR011910 ADP-heptose--LPS heptosyltransferase 2 LJF99_14275 IPR002201 Glycosyl transferase, family 9 LJF99_14280 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal LJF99_14280 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily LJF99_14280 IPR039901 3-deoxy-D-manno-octulosonic acid transferase LJF99_14285 IPR004703 Phosphotransferase system, sugar-specific permease component LJF99_14295 IPR016152 Phosphotransferase/anion transporter LJF99_14295 IPR002178 PTS EIIA type-2 domain LJF99_14300 IPR000843 LacI-type HTH domain LJF99_14300 IPR001761 Periplasmic binding protein/LacI sugar binding domain LJF99_14300 IPR028082 Periplasmic binding protein-like I LJF99_14300 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_14320 IPR005503 Flagellar basal body-associated protein FliL LJF99_14325 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LJF99_14325 IPR007440 Chorismate--pyruvate lyase LJF99_14330 IPR006370 4-hydroxybenzoate polyprenyltransferase-like LJF99_14330 IPR039653 Prenyltransferase LJF99_14330 IPR030470 UbiA prenyltransferase conserved site LJF99_14330 IPR000537 UbiA prenyltransferase family LJF99_14335 IPR041728 GPAT/DHAPAT, acyltransferase domain LJF99_14335 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB LJF99_14335 IPR002123 Phospholipid/glycerol acyltransferase LJF99_14335 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase LJF99_14340 IPR006200 Transcription regulator LexA LJF99_14340 IPR015927 Peptidase S24/S26A/S26B/S26C LJF99_14340 IPR039418 LexA-like LJF99_14340 IPR036286 LexA/Signal peptidase-like superfamily LJF99_14340 IPR006199 LexA repressor, DNA-binding domain LJF99_14340 IPR006197 Peptidase S24, LexA-like LJF99_14340 IPR036390 Winged helix DNA-binding domain superfamily LJF99_14340 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14350 IPR036249 Thioredoxin-like superfamily LJF99_14350 IPR003782 Copper chaperone SCO1/SenC LJF99_14360 IPR001537 tRNA/rRNA methyltransferase, SpoU type LJF99_14360 IPR029028 Alpha/beta knot methyltransferases LJF99_14360 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LJF99_14360 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase LJF99_14365 IPR032404 Two-component sensor protein CpxA, periplasmic domain LJF99_14365 IPR003660 HAMP domain LJF99_14365 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_14365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_14365 IPR038515 CpxA, periplasmic domain superfamily LJF99_14365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_14365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_14365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_14365 IPR005467 Histidine kinase domain LJF99_14370 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14370 IPR001789 Signal transduction response regulator, receiver domain LJF99_14370 IPR039420 Transcriptional regulatory protein WalR-like LJF99_14370 IPR011006 CheY-like superfamily LJF99_14370 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_14375 IPR023783 Cation efflux pump FieF LJF99_14375 IPR002524 Cation efflux protein LJF99_14375 IPR027470 Cation efflux protein, cytoplasmic domain LJF99_14375 IPR027469 Cation efflux transmembrane domain superfamily LJF99_14375 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LJF99_14380 IPR005881 Serine O-acetyltransferase LJF99_14380 IPR011004 Trimeric LpxA-like superfamily LJF99_14380 IPR018357 Hexapeptide transferase, conserved site LJF99_14380 IPR001451 Hexapeptide repeat LJF99_14380 IPR042122 Serine acetyltransferase, N-terminal domain superfamily LJF99_14380 IPR010493 Serine acetyltransferase, N-terminal LJF99_14390 IPR009252 Cell division protein ZapB LJF99_14395 IPR029062 Class I glutamine amidotransferase-like LJF99_14395 IPR026041 Glyoxalase ElbB LJF99_14400 IPR012337 Ribonuclease H-like superfamily LJF99_14400 IPR029060 PIN-like domain superfamily LJF99_14400 IPR008918 Helix-hairpin-helix motif, class 2 LJF99_14400 IPR002298 DNA polymerase A LJF99_14400 IPR018320 DNA polymerase 1 LJF99_14400 IPR020045 DNA polymerase I-like, H3TH domain LJF99_14400 IPR036397 Ribonuclease H superfamily LJF99_14400 IPR001098 DNA-directed DNA polymerase, family A, palm domain LJF99_14400 IPR019760 DNA-directed DNA polymerase, family A, conserved site LJF99_14400 IPR036279 5'-3' exonuclease, C-terminal domain superfamily LJF99_14400 IPR002421 5'-3' exonuclease, N-terminal LJF99_14400 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal LJF99_14400 IPR002562 3'-5' exonuclease domain LJF99_14405 IPR001451 Hexapeptide repeat LJF99_14405 IPR011004 Trimeric LpxA-like superfamily LJF99_14455 IPR038770 Sodium/solute symporter superfamily LJF99_14455 IPR016833 Putative sodium bile acid cotransporter LJF99_14460 IPR042095 Sulfatase-modifying factor enzyme superfamily LJF99_14460 IPR005532 Sulfatase-modifying factor enzyme LJF99_14460 IPR032890 Hercynine oxygenase, Actinobacteria LJF99_14460 IPR017806 Ergothioneine biosynthesis protein EgtB LJF99_14460 IPR024775 DinB-like domain LJF99_14460 IPR016187 C-type lectin fold LJF99_14460 IPR034660 DinB/YfiT-like putative metalloenzymes LJF99_14470 IPR029058 Alpha/Beta hydrolase fold LJF99_14470 IPR000801 Putative esterase LJF99_14470 IPR014186 S-formylglutathione hydrolase LJF99_14475 IPR036291 NAD(P)-binding domain superfamily LJF99_14475 IPR013149 Alcohol dehydrogenase, C-terminal LJF99_14475 IPR011032 GroES-like superfamily LJF99_14475 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LJF99_14475 IPR013154 Alcohol dehydrogenase, N-terminal LJF99_14475 IPR020843 Polyketide synthase, enoylreductase domain LJF99_14475 IPR014183 Alcohol dehydrogenase class III LJF99_14480 IPR036390 Winged helix DNA-binding domain superfamily LJF99_14480 IPR005119 LysR, substrate-binding LJF99_14480 IPR000847 Transcription regulator HTH, LysR LJF99_14480 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14485 IPR001851 ABC transporter, permease LJF99_14490 IPR001851 ABC transporter, permease LJF99_14495 IPR017871 ABC transporter, conserved site LJF99_14495 IPR003439 ABC transporter-like LJF99_14495 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_14495 IPR003593 AAA+ ATPase domain LJF99_14505 IPR003760 ABC transporter substrate-binding protein PnrA-like LJF99_14505 IPR028082 Periplasmic binding protein-like I LJF99_14510 IPR013986 DExx box DNA helicase domain superfamily LJF99_14510 IPR005753 DNA helicase, ATP-dependent, UvrD type LJF99_14510 IPR014017 UvrD-like DNA helicase, C-terminal LJF99_14510 IPR000212 DNA helicase, UvrD/REP type LJF99_14510 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_14510 IPR014016 UvrD-like helicase, ATP-binding domain LJF99_14510 IPR034739 UvrD/AddA helicase, N-terminal LJF99_14550 IPR007055 BON domain LJF99_14550 IPR014004 Transport-associated and nodulation domain, bacteria LJF99_14570 IPR036390 Winged helix DNA-binding domain superfamily LJF99_14570 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14570 IPR005119 LysR, substrate-binding LJF99_14570 IPR000847 Transcription regulator HTH, LysR LJF99_14575 IPR001123 Amino acid exporter protein, LeuE-type LJF99_14580 IPR007272 Sulphur transport domain LJF99_14585 IPR006415 P-type ATPase, subfamily IIIB LJF99_14585 IPR023214 HAD superfamily LJF99_14585 IPR036412 HAD-like superfamily LJF99_14585 IPR001757 P-type ATPase LJF99_14585 IPR023298 P-type ATPase, transmembrane domain superfamily LJF99_14585 IPR018303 P-type ATPase, phosphorylation site LJF99_14585 IPR023299 P-type ATPase, cytoplasmic domain N LJF99_14585 IPR004014 Cation-transporting P-type ATPase, N-terminal LJF99_14585 IPR006068 Cation-transporting P-type ATPase, C-terminal LJF99_14585 IPR008250 P-type ATPase, A domain superfamily LJF99_14590 IPR004778 Homoserine/Threonine efflux protein LJF99_14590 IPR001123 Amino acid exporter protein, LeuE-type LJF99_14595 IPR029062 Class I glutamine amidotransferase-like LJF99_14595 IPR009057 Homeobox-like domain superfamily LJF99_14595 IPR018060 DNA binding HTH domain, AraC-type LJF99_14595 IPR018062 HTH domain AraC-type, conserved site LJF99_14595 IPR020449 Transcription regulator HTH, AraC- type LJF99_14600 IPR000620 EamA domain LJF99_14600 IPR004626 RarD protein LJF99_14610 IPR015590 Aldehyde dehydrogenase domain LJF99_14610 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_14610 IPR016160 Aldehyde dehydrogenase, cysteine active site LJF99_14610 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_14610 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LJF99_14610 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_14615 IPR001387 Cro/C1-type helix-turn-helix domain LJF99_14615 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_14620 IPR005814 Aminotransferase class-III LJF99_14620 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_14620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_14620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_14625 IPR010061 Methylmalonate-semialdehyde dehydrogenase LJF99_14625 IPR015590 Aldehyde dehydrogenase domain LJF99_14625 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_14625 IPR016160 Aldehyde dehydrogenase, cysteine active site LJF99_14625 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_14625 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_14630 IPR022310 NAD/GMP synthase LJF99_14630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_14630 IPR025777 GMP synthetase ATP pyrophosphatase domain LJF99_14630 IPR017926 Glutamine amidotransferase LJF99_14630 IPR004739 GMP synthase, glutamine amidotransferase LJF99_14630 IPR001674 GMP synthase, C-terminal LJF99_14630 IPR029062 Class I glutamine amidotransferase-like LJF99_14630 IPR022955 GMP synthase LJF99_14635 IPR008141 Alanine dehydrogenase LJF99_14635 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 LJF99_14635 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LJF99_14635 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LJF99_14635 IPR036291 NAD(P)-binding domain superfamily LJF99_14640 IPR029056 Ribokinase-like LJF99_14640 IPR002139 Ribokinase/fructokinase LJF99_14640 IPR011611 Carbohydrate kinase PfkB LJF99_14640 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LJF99_14645 IPR030489 Transcription regulator Rrf2-type, conserved site LJF99_14645 IPR000944 Transcription regulator Rrf2-type LJF99_14645 IPR023761 Transcriptional repressor HTH, NsrR LJF99_14645 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14645 IPR036390 Winged helix DNA-binding domain superfamily LJF99_14660 IPR003798 DNA recombination RmuC LJF99_14665 IPR003445 Cation transporter LJF99_14665 IPR004772 TrkH potassium transport family LJF99_14670 IPR003148 Regulator of K+ conductance, N-terminal LJF99_14670 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_14670 IPR006037 Regulator of K+ conductance, C-terminal LJF99_14670 IPR036291 NAD(P)-binding domain superfamily LJF99_14670 IPR006036 Potassium uptake protein TrkA LJF99_14675 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site LJF99_14675 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type LJF99_14675 IPR035926 NusB-like superfamily LJF99_14675 IPR006027 NusB/RsmB/TIM44 LJF99_14675 IPR023267 RNA (C5-cytosine) methyltransferase LJF99_14675 IPR004573 rRNA small subunit methyltransferase B LJF99_14675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_14680 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain LJF99_14680 IPR011034 Formyl transferase-like, C-terminal domain superfamily LJF99_14680 IPR036477 Formyl transferase, N-terminal domain superfamily LJF99_14680 IPR001555 Phosphoribosylglycinamide formyltransferase, active site LJF99_14680 IPR037022 Formyl transferase, C-terminal domain superfamily LJF99_14680 IPR005793 Formyl transferase, C-terminal LJF99_14680 IPR005794 Methionyl-tRNA formyltransferase LJF99_14680 IPR002376 Formyl transferase, N-terminal LJF99_14685 IPR023635 Peptide deformylase LJF99_14685 IPR036821 Peptide deformylase superfamily LJF99_14690 IPR018392 LysM domain LJF99_14690 IPR036779 LysM domain superfamily LJF99_14695 IPR003488 DNA recombination-mediator protein A LJF99_14695 IPR041614 DprA, winged helix domain LJF99_14695 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14700 IPR007456 Smg LJF99_14705 IPR000380 DNA topoisomerase, type IA LJF99_14705 IPR013498 DNA topoisomerase, type IA, zn finger LJF99_14710 IPR035893 PurE domain superfamily LJF99_14710 IPR024694 PurE, prokaryotic type LJF99_14710 IPR033747 Class I PurE LJF99_14710 IPR000031 PurE domain LJF99_14715 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LJF99_14715 IPR023535 Threonylcarbamoyl-AMP synthase LJF99_14715 IPR006070 YrdC-like domain LJF99_14720 IPR018375 Coproporphyrinogen III oxidase, conserved site LJF99_14720 IPR001260 Coproporphyrinogen III oxidase, aerobic LJF99_14720 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily LJF99_14725 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LJF99_14725 IPR022893 Shikimate dehydrogenase family LJF99_14725 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal LJF99_14725 IPR011342 Shikimate dehydrogenase LJF99_14725 IPR041121 SDH, C-terminal LJF99_14725 IPR036291 NAD(P)-binding domain superfamily LJF99_14730 IPR009962 Protein of unknown function DUF1488 LJF99_14730 IPR036692 Shew3726-like superfamily LJF99_14735 IPR030393 EngB-type guanine nucleotide-binding (G) domain LJF99_14735 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC LJF99_14735 IPR006073 GTP binding domain LJF99_14735 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_14740 IPR009056 Cytochrome c-like domain LJF99_14740 IPR036909 Cytochrome c-like domain superfamily LJF99_14740 IPR024167 Cytochrome c4-like LJF99_14745 IPR007336 Der GTPase activator LJF99_14750 IPR019617 Domain of unknown function DUF2489 LJF99_14755 IPR023404 Radical SAM, alpha/beta horseshoe LJF99_14755 IPR007197 Radical SAM LJF99_14755 IPR010723 HemN, C-terminal LJF99_14755 IPR034505 Anaerobic coproporphyrinogen-III oxidase LJF99_14755 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN LJF99_14755 IPR006638 Elp3/MiaB/NifB LJF99_14760 IPR006330 Adenosine/adenine deaminase LJF99_14760 IPR001365 Adenosine/AMP deaminase domain LJF99_14760 IPR028893 Adenosine deaminase LJF99_14760 IPR032466 Metal-dependent hydrolase LJF99_14765 IPR009057 Homeobox-like domain superfamily LJF99_14765 IPR011006 CheY-like superfamily LJF99_14765 IPR002197 DNA binding HTH domain, Fis-type LJF99_14765 IPR003593 AAA+ ATPase domain LJF99_14765 IPR001789 Signal transduction response regulator, receiver domain LJF99_14765 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_14765 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_14765 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_14765 IPR025944 Sigma-54 interaction domain, conserved site LJF99_14765 IPR010114 DNA-binding transcriptional regulator NtrC LJF99_14765 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_14770 IPR035965 PAS domain superfamily LJF99_14770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_14770 IPR013767 PAS fold LJF99_14770 IPR000014 PAS domain LJF99_14770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_14770 IPR005467 Histidine kinase domain LJF99_14770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_14770 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_14770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_14780 IPR004809 Glutamine synthetase type I LJF99_14780 IPR027302 Glutamine synthetase, N-terminal conserved site LJF99_14780 IPR027303 Glutamine synthetase, glycine-rich site LJF99_14780 IPR008146 Glutamine synthetase, catalytic domain LJF99_14780 IPR036651 Glutamine synthetase, N-terminal domain superfamily LJF99_14780 IPR008147 Glutamine synthetase, beta-Grasp domain LJF99_14780 IPR001637 Glutamine synthetase class-I, adenylation site LJF99_14780 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LJF99_14785 IPR035651 BipA, domain V LJF99_14785 IPR035647 EF-G domain III/V-like LJF99_14785 IPR006298 GTP-binding protein TypA LJF99_14785 IPR031157 Tr-type G domain, conserved site LJF99_14785 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_14785 IPR000795 Transcription factor, GTP-binding domain LJF99_14785 IPR005225 Small GTP-binding protein domain LJF99_14785 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_14785 IPR004161 Translation elongation factor EFTu-like, domain 2 LJF99_14785 IPR042116 GTP-binding protein TypA/BipA, C-terminal LJF99_14785 IPR000640 Elongation factor EFG, domain V-like LJF99_14790 IPR023679 Uncharacterised protein family UPF0761, bacterial LJF99_14790 IPR017039 Virulence factor BrkB LJF99_14805 IPR012660 Thioesterase, putative LJF99_14805 IPR016181 Acyl-CoA N-acyltransferase LJF99_14805 IPR000182 GNAT domain LJF99_14805 IPR029069 HotDog domain superfamily LJF99_14815 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_14815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_14815 IPR012340 Nucleic acid-binding, OB-fold LJF99_14815 IPR001650 Helicase, C-terminal LJF99_14815 IPR033454 RecG, wedge domain LJF99_14815 IPR011545 DEAD/DEAH box helicase domain LJF99_14815 IPR004609 ATP-dependent DNA helicase RecG LJF99_14820 IPR025202 Phospholipase D-like domain LJF99_14820 IPR001736 Phospholipase D/Transphosphatidylase LJF99_14820 IPR016270 CDP-alcohol phosphatidyltransferase class-II family LJF99_14825 IPR003474 Gluconate transporter LJF99_14830 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_14830 IPR031322 Shikimate kinase/gluconokinase LJF99_14830 IPR006001 Carbohydrate kinase, thermoresistant glucokinase LJF99_14835 IPR004786 6-phosphogluconate dehydratase LJF99_14835 IPR037237 IlvD/EDD, N-terminal domain LJF99_14835 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site LJF99_14835 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase LJF99_14835 IPR042096 Dihydroxy-acid dehydratase, C-terminal LJF99_14840 IPR031337 KDPG/KHG aldolase, active site 1 LJF99_14840 IPR000887 KDPG/KHG aldolase LJF99_14840 IPR031338 KDPG/KHG aldolase, active site 2 LJF99_14840 IPR013785 Aldolase-type TIM barrel LJF99_14845 IPR001761 Periplasmic binding protein/LacI sugar binding domain LJF99_14845 IPR028082 Periplasmic binding protein-like I LJF99_14845 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_14845 IPR000843 LacI-type HTH domain LJF99_14855 IPR011055 Duplicated hybrid motif LJF99_14855 IPR016047 Peptidase M23 LJF99_14860 IPR006124 Metalloenzyme LJF99_14860 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_14860 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent LJF99_14860 IPR011258 BPG-independent PGAM, N-terminal LJF99_14860 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily LJF99_14865 IPR001763 Rhodanese-like domain LJF99_14865 IPR036873 Rhodanese-like domain superfamily LJF99_14870 IPR003708 Bacterial protein export chaperone SecB LJF99_14870 IPR035958 SecB-like superfamily LJF99_14875 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LJF99_14875 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent LJF99_14875 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal LJF99_14875 IPR036291 NAD(P)-binding domain superfamily LJF99_14875 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_14875 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal LJF99_14880 IPR017726 Fe/S biogenesis protein NfuA LJF99_14880 IPR000361 FeS cluster biogenesis LJF99_14880 IPR034904 Fe-S cluster assembly domain superfamily LJF99_14880 IPR035903 HesB-like domain superfamily LJF99_14880 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal LJF99_14885 IPR029057 Phosphoribosyltransferase-like LJF99_14885 IPR000836 Phosphoribosyltransferase domain LJF99_14885 IPR005222 Competence protein ComF LJF99_14890 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase LJF99_14890 IPR000073 Alpha/beta hydrolase fold-1 LJF99_14890 IPR029058 Alpha/Beta hydrolase fold LJF99_14910 IPR037027 YqgF/RNase H-like domain superfamily LJF99_14910 IPR006641 YqgF/RNase H-like domain LJF99_14910 IPR012337 Ribonuclease H-like superfamily LJF99_14910 IPR018974 Tex-like protein, N-terminal LJF99_14910 IPR023319 Tex-like protein, HTH domain superfamily LJF99_14910 IPR012340 Nucleic acid-binding, OB-fold LJF99_14910 IPR003029 S1 domain LJF99_14910 IPR023323 Tex-like domain superfamily LJF99_14910 IPR041692 HHH domain 9 LJF99_14910 IPR032639 Tex protein, YqgF-like domain LJF99_14910 IPR010994 RuvA domain 2-like LJF99_14910 IPR022967 RNA-binding domain, S1 LJF99_14915 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LJF99_14915 IPR018151 Transcription elongation factor, GreA/GreB, conserved site LJF99_14915 IPR028624 Transcription elongation factor GreA/GreB LJF99_14915 IPR023459 Transcription elongation factor GreA/GreB family LJF99_14915 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal LJF99_14915 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily LJF99_14915 IPR006358 Transcription elongation factor GreB LJF99_14915 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LJF99_14920 IPR039420 Transcriptional regulatory protein WalR-like LJF99_14920 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_14920 IPR001789 Signal transduction response regulator, receiver domain LJF99_14920 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_14920 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_14920 IPR011006 CheY-like superfamily LJF99_14925 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_14925 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_14925 IPR005467 Histidine kinase domain LJF99_14925 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_14925 IPR003660 HAMP domain LJF99_14925 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_14925 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_14935 IPR018268 Ribosomal protein S10, conserved site LJF99_14935 IPR036838 Ribosomal protein S10 domain superfamily LJF99_14935 IPR027486 Ribosomal protein S10 domain LJF99_14935 IPR001848 Ribosomal protein S10 LJF99_14940 IPR019927 Ribosomal protein L3, bacterial/organelle-type LJF99_14940 IPR019926 Ribosomal protein L3, conserved site LJF99_14940 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_14940 IPR000597 Ribosomal protein L3 LJF99_14945 IPR013005 50S ribosomal protein uL4 LJF99_14945 IPR002136 Ribosomal protein L4/L1e LJF99_14945 IPR023574 Ribosomal protein L4 domain superfamily LJF99_14950 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LJF99_14950 IPR012678 Ribosomal protein L23/L15e core domain superfamily LJF99_14950 IPR013025 Ribosomal protein L25/L23 LJF99_14950 IPR001014 Ribosomal protein L23/L25, conserved site LJF99_14955 IPR005880 Ribosomal protein L2, bacterial/organellar-type LJF99_14955 IPR022669 Ribosomal protein L2, C-terminal LJF99_14955 IPR008991 Translation protein SH3-like domain superfamily LJF99_14955 IPR014722 Ribosomal protein L2, domain 2 LJF99_14955 IPR022666 Ribosomal Proteins L2, RNA binding domain LJF99_14955 IPR014726 Ribosomal protein L2, domain 3 LJF99_14955 IPR012340 Nucleic acid-binding, OB-fold LJF99_14955 IPR002171 Ribosomal protein L2 LJF99_14960 IPR023575 Ribosomal protein S19, superfamily LJF99_14960 IPR020934 Ribosomal protein S19 conserved site LJF99_14960 IPR002222 Ribosomal protein S19/S15 LJF99_14960 IPR005732 Ribosomal protein S19, bacterial-type LJF99_14965 IPR001063 Ribosomal protein L22/L17 LJF99_14965 IPR018260 Ribosomal protein L22/L17, conserved site LJF99_14965 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type LJF99_14965 IPR036394 Ribosomal protein L22/L17 superfamily LJF99_14970 IPR004087 K Homology domain LJF99_14970 IPR015946 K homology domain-like, alpha/beta LJF99_14970 IPR004044 K Homology domain, type 2 LJF99_14970 IPR009019 K homology domain superfamily, prokaryotic type LJF99_14970 IPR005704 Ribosomal protein S3, bacterial-type LJF99_14970 IPR001351 Ribosomal protein S3, C-terminal LJF99_14970 IPR036419 Ribosomal protein S3, C-terminal domain superfamily LJF99_14970 IPR018280 Ribosomal protein S3, conserved site LJF99_14975 IPR036920 Ribosomal protein L10e/L16 superfamily LJF99_14975 IPR016180 Ribosomal protein L10e/L16 LJF99_14975 IPR000114 Ribosomal protein L16 LJF99_14975 IPR020798 Ribosomal protein L16, conserved site LJF99_14980 IPR001854 Ribosomal protein L29/L35 LJF99_14980 IPR036049 Ribosomal protein L29/L35 superfamily LJF99_14980 IPR018254 Ribosomal protein L29, conserved site LJF99_14985 IPR012340 Nucleic acid-binding, OB-fold LJF99_14985 IPR000266 Ribosomal protein S17/S11 LJF99_14985 IPR019984 30S ribosomal protein S17 LJF99_14985 IPR019979 Ribosomal protein S17, conserved site LJF99_14990 IPR005745 Ribosomal protein L14P, bacterial-type LJF99_14990 IPR036853 Ribosomal protein L14 superfamily LJF99_14990 IPR019972 Ribosomal protein L14P, conserved site LJF99_14990 IPR000218 Ribosomal protein L14P LJF99_14995 IPR005825 Ribosomal protein L24/L26, conserved site LJF99_14995 IPR003256 Ribosomal protein L24 LJF99_14995 IPR014722 Ribosomal protein L2, domain 2 LJF99_14995 IPR041988 Ribosomal Protein L26/L24, KOW domain LJF99_14995 IPR008991 Translation protein SH3-like domain superfamily LJF99_15000 IPR022803 Ribosomal protein L5 domain superfamily LJF99_15000 IPR002132 Ribosomal protein L5 LJF99_15000 IPR020930 Ribosomal protein L5, bacterial-type LJF99_15000 IPR031309 Ribosomal protein L5, C-terminal LJF99_15000 IPR031310 Ribosomal protein L5, N-terminal LJF99_15000 IPR020929 Ribosomal protein L5, conserved site LJF99_15005 IPR023036 Ribosomal protein S14, bacterial/plastid LJF99_15005 IPR018271 Ribosomal protein S14, conserved site LJF99_15005 IPR001209 Ribosomal protein S14 LJF99_15010 IPR000630 Ribosomal protein S8 LJF99_15010 IPR035987 Ribosomal protein S8 superfamily LJF99_15015 IPR019906 Ribosomal protein L6, bacterial-type LJF99_15015 IPR002358 Ribosomal protein L6, conserved site LJF99_15015 IPR000702 Ribosomal protein L6 LJF99_15015 IPR020040 Ribosomal protein L6, alpha-beta domain LJF99_15015 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily LJF99_15020 IPR004389 Ribosomal protein L18, bacterial-type LJF99_15020 IPR005484 Ribosomal protein L18 LJF99_15025 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_15025 IPR005712 Ribosomal protein S5, bacterial-type LJF99_15025 IPR000851 Ribosomal protein S5 LJF99_15025 IPR005324 Ribosomal protein S5, C-terminal LJF99_15025 IPR018192 Ribosomal protein S5, N-terminal, conserved site LJF99_15025 IPR013810 Ribosomal protein S5, N-terminal LJF99_15025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_15030 IPR005996 Ribosomal protein L30, bacterial-type LJF99_15030 IPR018038 Ribosomal protein L30, conserved site LJF99_15030 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LJF99_15030 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily LJF99_15035 IPR036227 Ribosomal L18e/L15P superfamily LJF99_15035 IPR005749 Ribosomal protein L15, bacterial-type LJF99_15035 IPR001196 Ribosomal protein L15, conserved site LJF99_15035 IPR021131 Ribosomal protein L18e/L15P LJF99_15035 IPR030878 Ribosomal protein L15 LJF99_15040 IPR002208 SecY/SEC61-alpha family LJF99_15040 IPR030659 SecY conserved site LJF99_15040 IPR026593 Protein translocase subunit SecY LJF99_15040 IPR023201 SecY domain superfamily LJF99_15045 IPR000473 Ribosomal protein L36 LJF99_15045 IPR035977 Ribosomal protein L36 superfamily LJF99_15050 IPR027437 30s ribosomal protein S13, C-terminal LJF99_15050 IPR010979 Ribosomal protein S13-like, H2TH LJF99_15050 IPR018269 Ribosomal protein S13, conserved site LJF99_15050 IPR019980 Ribosomal protein S13, bacterial-type LJF99_15050 IPR001892 Ribosomal protein S13 LJF99_15055 IPR036967 Ribosomal protein S11 superfamily LJF99_15055 IPR001971 Ribosomal protein S11 LJF99_15055 IPR019981 Ribosomal protein S11, bacterial-type LJF99_15055 IPR018102 Ribosomal S11, conserved site LJF99_15060 IPR036986 RNA-binding S4 domain superfamily LJF99_15060 IPR002942 RNA-binding S4 domain LJF99_15060 IPR018079 Ribosomal protein S4, conserved site LJF99_15060 IPR005709 Ribosomal protein S4, bacterial-type LJF99_15060 IPR001912 Ribosomal protein S4/S9, N-terminal LJF99_15060 IPR022801 Ribosomal protein S4/S9 LJF99_15065 IPR011260 RNA polymerase, alpha subunit, C-terminal LJF99_15065 IPR011773 DNA-directed RNA polymerase, alpha subunit LJF99_15065 IPR011262 DNA-directed RNA polymerase, insert domain LJF99_15065 IPR036643 DNA-directed RNA polymerase, insert domain superfamily LJF99_15065 IPR036603 RNA polymerase, RBP11-like subunit LJF99_15065 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type LJF99_15070 IPR036373 Ribosomal protein L17 superfamily LJF99_15070 IPR000456 Ribosomal protein L17 LJF99_15120 IPR002611 IstB-like ATP-binding protein LJF99_15120 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_15120 IPR003593 AAA+ ATPase domain LJF99_15120 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15125 IPR036397 Ribonuclease H superfamily LJF99_15125 IPR012337 Ribonuclease H-like superfamily LJF99_15125 IPR001584 Integrase, catalytic core LJF99_15125 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_15135 IPR004006 DhaK domain LJF99_15135 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 LJF99_15140 IPR012737 Dihydroxyacetone kinase, subunit L LJF99_15140 IPR036117 DhaL domain superfamily LJF99_15140 IPR004007 DhaL domain LJF99_15145 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LJF99_15145 IPR000032 Phosphocarrier protein HPr-like LJF99_15145 IPR035895 HPr-like superfamily LJF99_15145 IPR008279 PEP-utilising enzyme, mobile domain LJF99_15145 IPR036637 Phosphohistidine domain superfamily LJF99_15145 IPR004701 Phosphotransferase system, mannose-type IIA component LJF99_15145 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily LJF99_15145 IPR008731 Phosphotransferase system, enzyme I N-terminal LJF99_15145 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain LJF99_15145 IPR036618 PtsI, HPr-binding domain superfamily LJF99_15145 IPR039643 Dihydroxyacetone kinase phosphotransferase subunit DhaM LJF99_15150 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LJF99_15150 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LJF99_15150 IPR016205 Glycerol dehydrogenase LJF99_15155 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_15155 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_15155 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_15155 IPR035965 PAS domain superfamily LJF99_15155 IPR000014 PAS domain LJF99_15155 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15155 IPR002197 DNA binding HTH domain, Fis-type LJF99_15155 IPR009057 Homeobox-like domain superfamily LJF99_15155 IPR013767 PAS fold LJF99_15155 IPR003593 AAA+ ATPase domain LJF99_15155 IPR029016 GAF-like domain superfamily LJF99_15160 IPR002549 Transmembrane protein TqsA-like LJF99_15165 IPR000086 NUDIX hydrolase domain LJF99_15165 IPR020084 NUDIX hydrolase, conserved site LJF99_15165 IPR020476 NUDIX hydrolase LJF99_15165 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_15190 IPR040333 Catalase, clade 3 LJF99_15190 IPR010582 Catalase immune-responsive domain LJF99_15190 IPR020835 Catalase superfamily LJF99_15190 IPR002226 Catalase haem-binding site LJF99_15190 IPR037060 Catalase core domain superfamily LJF99_15190 IPR011614 Catalase core domain LJF99_15190 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 LJF99_15190 IPR018028 Catalase, mono-functional, haem-containing LJF99_15190 IPR024708 Catalase active site LJF99_15215 IPR029016 GAF-like domain superfamily LJF99_15215 IPR029787 Nucleotide cyclase LJF99_15215 IPR000160 GGDEF domain LJF99_15220 IPR023214 HAD superfamily LJF99_15220 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like LJF99_15220 IPR036412 HAD-like superfamily LJF99_15225 IPR003593 AAA+ ATPase domain LJF99_15225 IPR003439 ABC transporter-like LJF99_15225 IPR008995 Molybdate/tungstate binding, C-terminal LJF99_15225 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15225 IPR013611 Transport-associated OB, type 2 LJF99_15225 IPR017871 ABC transporter, conserved site LJF99_15225 IPR015853 ABC transporter, ferric cation import, FbpC LJF99_15235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_15235 IPR035906 MetI-like superfamily LJF99_15250 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LJF99_15250 IPR000524 Transcription regulator HTH, GntR LJF99_15250 IPR017722 Phosphonate utilization transcriptional regulator PhnR LJF99_15250 IPR011663 UbiC transcription regulator-associated LJF99_15250 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_15250 IPR036390 Winged helix DNA-binding domain superfamily LJF99_15270 IPR003829 Pirin, N-terminal domain LJF99_15270 IPR012093 Pirin LJF99_15270 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain LJF99_15270 IPR014710 RmlC-like jelly roll fold LJF99_15270 IPR011051 RmlC-like cupin domain superfamily LJF99_15275 IPR032808 DoxX family LJF99_15280 IPR011335 Restriction endonuclease type II-like LJF99_15280 IPR041500 RecC, C-terminal LJF99_15280 IPR006697 RecBCD enzyme subunit RecC LJF99_15280 IPR013986 DExx box DNA helicase domain superfamily LJF99_15280 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15285 IPR004586 RecBCD enzyme subunit RecB LJF99_15285 IPR011335 Restriction endonuclease type II-like LJF99_15285 IPR014016 UvrD-like helicase, ATP-binding domain LJF99_15285 IPR034739 UvrD/AddA helicase, N-terminal LJF99_15285 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type LJF99_15285 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15285 IPR014017 UvrD-like DNA helicase, C-terminal LJF99_15285 IPR000212 DNA helicase, UvrD/REP type LJF99_15285 IPR011604 Exonuclease, phage-type/RecB, C-terminal LJF99_15290 IPR027785 UvrD-like helicase C-terminal domain LJF99_15290 IPR003593 AAA+ ATPase domain LJF99_15290 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15290 IPR006344 RecBCD enzyme subunit RecD LJF99_15290 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain LJF99_15300 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LJF99_15300 IPR037523 Vicinal oxygen chelate (VOC) domain LJF99_15300 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LJF99_15315 IPR029020 Ammonium/urea transporter LJF99_15315 IPR001905 Ammonium transporter LJF99_15315 IPR024041 Ammonium transporter AmtB-like domain LJF99_15315 IPR018047 Ammonium transporter, conserved site LJF99_15320 IPR002187 Nitrogen regulatory protein PII LJF99_15320 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LJF99_15320 IPR002332 Nitrogen regulatory protein P-II, urydylation site LJF99_15320 IPR011322 Nitrogen regulatory PII-like, alpha/beta LJF99_15320 IPR017918 Nitrogen regulatory protein PII, conserved site LJF99_15325 IPR011006 CheY-like superfamily LJF99_15325 IPR029787 Nucleotide cyclase LJF99_15325 IPR000160 GGDEF domain LJF99_15325 IPR001789 Signal transduction response regulator, receiver domain LJF99_15335 IPR033479 Double Cache domain 1 LJF99_15335 IPR003660 HAMP domain LJF99_15335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_15335 IPR029151 Periplasmic sensor-like domain superfamily LJF99_15355 IPR001789 Signal transduction response regulator, receiver domain LJF99_15355 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_15355 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_15355 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_15355 IPR011006 CheY-like superfamily LJF99_15355 IPR039420 Transcriptional regulatory protein WalR-like LJF99_15360 IPR003660 HAMP domain LJF99_15360 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_15360 IPR005467 Histidine kinase domain LJF99_15360 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_15360 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_15360 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_15360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_15365 IPR029787 Nucleotide cyclase LJF99_15365 IPR000160 GGDEF domain LJF99_15375 IPR002059 Cold-shock protein, DNA-binding LJF99_15375 IPR019844 Cold-shock (CSD) domain LJF99_15375 IPR011129 Cold shock domain LJF99_15375 IPR012156 Cold shock, CspA LJF99_15375 IPR012340 Nucleic acid-binding, OB-fold LJF99_15380 IPR013656 PAS fold-4 LJF99_15380 IPR035965 PAS domain superfamily LJF99_15380 IPR000700 PAS-associated, C-terminal LJF99_15380 IPR000014 PAS domain LJF99_15380 IPR029787 Nucleotide cyclase LJF99_15380 IPR000160 GGDEF domain LJF99_15385 IPR003439 ABC transporter-like LJF99_15385 IPR041102 UvrA, interaction domain LJF99_15385 IPR041552 UvrA DNA-binding domain LJF99_15385 IPR004602 UvrABC system subunit A LJF99_15385 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15385 IPR017871 ABC transporter, conserved site LJF99_15390 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_15390 IPR000792 Transcription regulator LuxR, C-terminal LJF99_15390 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_15395 IPR011344 Single-stranded DNA-binding protein LJF99_15395 IPR000424 Primosome PriB/single-strand DNA-binding LJF99_15395 IPR012340 Nucleic acid-binding, OB-fold LJF99_15405 IPR002524 Cation efflux protein LJF99_15405 IPR027469 Cation efflux transmembrane domain superfamily LJF99_15405 IPR027470 Cation efflux protein, cytoplasmic domain LJF99_15405 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LJF99_15435 IPR003148 Regulator of K+ conductance, N-terminal LJF99_15435 IPR006153 Cation/H+ exchanger LJF99_15435 IPR004771 K+/H+ exchanger LJF99_15435 IPR036291 NAD(P)-binding domain superfamily LJF99_15435 IPR038770 Sodium/solute symporter superfamily LJF99_15435 IPR020884 Glutathione-regulated potassium-efflux system protein KefB LJF99_15440 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG LJF99_15440 IPR029039 Flavoprotein-like superfamily LJF99_15440 IPR003680 Flavodoxin-like fold LJF99_15455 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain LJF99_15455 IPR029058 Alpha/Beta hydrolase fold LJF99_15455 IPR023302 Peptidase S9A, N-terminal domain LJF99_15455 IPR002471 Peptidase S9, serine active site LJF99_15455 IPR002470 Peptidase S9A, prolyl oligopeptidase LJF99_15475 IPR012506 YhhN-like LJF99_15480 IPR004638 Drug resistance transporter EmrB-like LJF99_15480 IPR036259 MFS transporter superfamily LJF99_15480 IPR020846 Major facilitator superfamily domain LJF99_15480 IPR011701 Major facilitator superfamily LJF99_15485 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LJF99_15500 IPR036458 Sodium:dicarboxylate symporter superfamily LJF99_15500 IPR001991 Sodium:dicarboxylate symporter LJF99_15500 IPR018107 Sodium:dicarboxylate symporter, conserved site LJF99_15500 IPR033380 Glutamate-aspartate symport protein GltP/GltT LJF99_15505 IPR019620 Putative metal-binding protein LJF99_15510 IPR002771 Multiple antibiotic resistance (MarC)-related LJF99_15515 IPR005119 LysR, substrate-binding LJF99_15515 IPR000847 Transcription regulator HTH, LysR LJF99_15515 IPR023746 Transcription regulator HTH, YidZ LJF99_15515 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_15515 IPR036390 Winged helix DNA-binding domain superfamily LJF99_15515 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain LJF99_15520 IPR003369 Sec-independent protein translocase protein TatA/B/E LJF99_15520 IPR006312 Sec-independent protein translocase protein TatA/E LJF99_15530 IPR000189 Prokaryotic transglycosylase, active site LJF99_15530 IPR023346 Lysozyme-like domain superfamily LJF99_15530 IPR023703 Membrane-bound lytic murein transglycosylase F LJF99_15530 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_15530 IPR008258 Transglycosylase SLT domain 1 LJF99_15540 IPR030871 Cardiolipin synthase C LJF99_15540 IPR025202 Phospholipase D-like domain LJF99_15540 IPR001736 Phospholipase D/Transphosphatidylase LJF99_15550 IPR023764 Transcriptional repressor HTH, FabR LJF99_15550 IPR001647 DNA-binding HTH domain, TetR-type LJF99_15550 IPR009057 Homeobox-like domain superfamily LJF99_15565 IPR004398 RNA methyltransferase, RsmD LJF99_15565 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_15565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_15570 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LJF99_15570 IPR003593 AAA+ ATPase domain LJF99_15570 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15570 IPR013822 Signal recognition particle SRP54, helical bundle LJF99_15570 IPR004390 Signal-recognition particle receptor FtsY LJF99_15570 IPR036225 SRP/SRP receptor, N-terminal LJF99_15570 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily LJF99_15575 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_15575 IPR005286 Cell division protein FtsE, ATP-binding LJF99_15575 IPR003593 AAA+ ATPase domain LJF99_15575 IPR017871 ABC transporter, conserved site LJF99_15575 IPR003439 ABC transporter-like LJF99_15580 IPR004513 Cell division protein FtsX LJF99_15580 IPR040690 FtsX, extracellular domain LJF99_15585 IPR007630 RNA polymerase sigma-70 region 4 LJF99_15585 IPR013325 RNA polymerase sigma factor, region 2 LJF99_15585 IPR014284 RNA polymerase sigma-70 like domain LJF99_15585 IPR007627 RNA polymerase sigma-70 region 2 LJF99_15585 IPR009042 RNA polymerase sigma-70 region 1.2 LJF99_15585 IPR000943 RNA polymerase sigma-70 LJF99_15585 IPR013324 RNA polymerase sigma factor, region 3/4-like LJF99_15585 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria LJF99_15590 IPR036874 Carbonic anhydrase superfamily LJF99_15590 IPR001765 Carbonic anhydrase LJF99_15590 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site LJF99_15595 IPR010248 Histidine utilization repressor LJF99_15595 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_15595 IPR036390 Winged helix DNA-binding domain superfamily LJF99_15595 IPR011663 UbiC transcription regulator-associated LJF99_15595 IPR000524 Transcription regulator HTH, GntR LJF99_15595 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LJF99_15600 IPR011059 Metal-dependent hydrolase, composite domain superfamily LJF99_15600 IPR005920 Imidazolonepropionase LJF99_15600 IPR006680 Amidohydrolase-related LJF99_15600 IPR032466 Metal-dependent hydrolase LJF99_15605 IPR005923 Formiminoglutamase LJF99_15605 IPR023696 Ureohydrolase domain superfamily LJF99_15605 IPR006035 Ureohydrolase LJF99_15610 IPR035400 Urocanase, N-terminal domain LJF99_15610 IPR023636 Urocanase conserved site LJF99_15610 IPR038364 Urocanase, central domain superfamily LJF99_15610 IPR035401 Urocanase, C-terminal domain LJF99_15610 IPR023637 Urocanase LJF99_15610 IPR036190 Urocanase superfamily LJF99_15610 IPR035085 Urocanase, Rossmann-like domain LJF99_15615 IPR008948 L-Aspartase-like LJF99_15615 IPR022313 Phenylalanine/histidine ammonia-lyases, active site LJF99_15615 IPR024083 Fumarase/histidase, N-terminal LJF99_15615 IPR005921 Histidine ammonia-lyase LJF99_15615 IPR001106 Aromatic amino acid lyase LJF99_15620 IPR004713 Calcium/proton exchanger LJF99_15620 IPR004837 Sodium/calcium exchanger membrane region LJF99_15625 IPR004498 Ribosomal protein L11 methyltransferase LJF99_15625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_15630 IPR001633 EAL domain LJF99_15630 IPR035919 EAL domain superfamily LJF99_15630 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 LJF99_15630 IPR000160 GGDEF domain LJF99_15630 IPR029787 Nucleotide cyclase LJF99_15660 IPR004845 Type II secretion system GspD, conserved site LJF99_15660 IPR013356 Type II secretion system GspD LJF99_15660 IPR038591 NolW-like superfamily LJF99_15660 IPR005644 NolW-like LJF99_15660 IPR004846 Type II/III secretion system LJF99_15660 IPR001775 GspD/PilQ family LJF99_15690 IPR004753 Cell shape determining protein MreB LJF99_15695 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 LJF99_15695 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 LJF99_15695 IPR007221 Rod shape-determining protein MreC LJF99_15700 IPR007227 Cell shape-determining protein MreD LJF99_15700 IPR026034 Cell shape-determining protein MreD, proteobacterial type LJF99_15705 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein LJF99_15705 IPR029001 Inosine triphosphate pyrophosphatase-like LJF99_15710 IPR003029 S1 domain LJF99_15710 IPR022967 RNA-binding domain, S1 LJF99_15710 IPR004659 Ribonuclease E/G LJF99_15710 IPR012340 Nucleic acid-binding, OB-fold LJF99_15710 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G LJF99_15715 IPR011836 Conserved hypothetical protein CHP02099 LJF99_15715 IPR032712 AsmA-like, C-terminal LJF99_15715 IPR025263 Domain of unknown function DUF3971 LJF99_15725 IPR003010 Carbon-nitrogen hydrolase LJF99_15725 IPR036526 Carbon-nitrogen hydrolase superfamily LJF99_15725 IPR001110 Uncharacterised protein family UPF0012, conserved site LJF99_15730 IPR035068 Metalloprotease TldD/PmbA, N-terminal LJF99_15730 IPR002510 Metalloprotease TldD/PmbA LJF99_15730 IPR025502 TldD LJF99_15730 IPR036059 Metalloprotease TldD/PmbA superfamily LJF99_15740 IPR002771 Multiple antibiotic resistance (MarC)-related LJF99_15755 IPR011006 CheY-like superfamily LJF99_15755 IPR001789 Signal transduction response regulator, receiver domain LJF99_15755 IPR037522 HD-GYP domain LJF99_15755 IPR003607 HD/PDEase domain LJF99_15760 IPR001789 Signal transduction response regulator, receiver domain LJF99_15760 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_15760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_15760 IPR036641 HPT domain superfamily LJF99_15760 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_15760 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_15760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_15760 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_15760 IPR003660 HAMP domain LJF99_15760 IPR011006 CheY-like superfamily LJF99_15760 IPR005467 Histidine kinase domain LJF99_15760 IPR019247 Histidine kinase BarA, N-terminal LJF99_15765 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_15765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_15770 IPR036513 STAS domain superfamily LJF99_15770 IPR012292 Globin/Protoglobin LJF99_15770 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain LJF99_15770 IPR002645 STAS domain LJF99_15775 IPR004090 Chemotaxis methyl-accepting receptor LJF99_15775 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_15775 IPR035965 PAS domain superfamily LJF99_15775 IPR000014 PAS domain LJF99_15775 IPR013655 PAS fold-3 LJF99_15775 IPR000700 PAS-associated, C-terminal LJF99_15775 IPR001610 PAC motif LJF99_15780 IPR005519 Acid phosphatase, class B-like LJF99_15780 IPR036412 HAD-like superfamily LJF99_15780 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA LJF99_15780 IPR023214 HAD superfamily LJF99_15790 IPR013976 Metal-dependent hydrolase HDOD LJF99_15805 IPR006153 Cation/H+ exchanger LJF99_15805 IPR018422 Cation/H+ exchanger, CPA1 family LJF99_15805 IPR038770 Sodium/solute symporter superfamily LJF99_15810 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily LJF99_15810 IPR004223 Vitamin B12-dependent methionine synthase, activation domain LJF99_15810 IPR036594 Methionine synthase domain LJF99_15810 IPR000489 Pterin-binding domain LJF99_15810 IPR033706 Methionine synthase, B12-binding domain LJF99_15810 IPR036589 Homocysteine-binding domain superfamily LJF99_15810 IPR003726 Homocysteine-binding domain LJF99_15810 IPR011005 Dihydropteroate synthase-like LJF99_15810 IPR036724 Cobalamin-binding domain superfamily LJF99_15810 IPR006158 Cobalamin (vitamin B12)-binding domain LJF99_15810 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LJF99_15810 IPR011822 Cobalamin-dependent methionine synthase LJF99_15815 IPR011761 ATP-grasp fold LJF99_15815 IPR013651 ATP-grasp fold, RimK-type LJF99_15815 IPR013815 ATP-grasp fold, subdomain 1 LJF99_15815 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK LJF99_15815 IPR041107 RimK, PreATP-grasp domain LJF99_15815 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX LJF99_15820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_15820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_15820 IPR005467 Histidine kinase domain LJF99_15820 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_15820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_15825 IPR011006 CheY-like superfamily LJF99_15825 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_15825 IPR001789 Signal transduction response regulator, receiver domain LJF99_15825 IPR039420 Transcriptional regulatory protein WalR-like LJF99_15825 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_15840 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily LJF99_15840 IPR005138 Aerolysin/Pertussis toxin domain LJF99_15840 IPR016187 C-type lectin fold LJF99_15840 IPR005831 Aerolysin/haemolysin toxin, conserved site LJF99_15840 IPR005830 Aerolysin LJF99_15845 IPR037509 Phosphomethylpyrimidine synthase LJF99_15845 IPR025747 ThiC-associated domain LJF99_15845 IPR038521 ThiC/Bza superfamily LJF99_15845 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B LJF99_15850 IPR034291 Thiamine phosphate synthase LJF99_15850 IPR036206 Thiamin phosphate synthase superfamily LJF99_15850 IPR022998 Thiamine phosphate synthase/TenI LJF99_15850 IPR013785 Aldolase-type TIM barrel LJF99_15855 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF LJF99_15855 IPR000594 THIF-type NAD/FAD binding fold LJF99_15855 IPR035985 Ubiquitin-activating enzyme LJF99_15865 IPR013785 Aldolase-type TIM barrel LJF99_15865 IPR033983 Thiazole synthase ThiG LJF99_15865 IPR008867 Thiazole synthase LJF99_15870 IPR012726 Thiazole biosynthesis ThiH LJF99_15870 IPR034428 ThiH/NocL/HydG-like LJF99_15870 IPR007197 Radical SAM LJF99_15870 IPR010722 Biotin and thiamin synthesis-associated domain LJF99_15870 IPR013785 Aldolase-type TIM barrel LJF99_15895 IPR001451 Hexapeptide repeat LJF99_15895 IPR018357 Hexapeptide transferase, conserved site LJF99_15895 IPR011004 Trimeric LpxA-like superfamily LJF99_15900 IPR014094 Penicillin-binding protein activator LpoB LJF99_15915 IPR004694 Hydroxy amino acid transporter LJF99_15920 IPR010331 Exopolysaccharide synthesis, ExoD LJF99_15930 IPR014910 Putative monooxygenase YdhR LJF99_15930 IPR011008 Dimeric alpha-beta barrel LJF99_15935 IPR002577 Helix-turn-helix, HxlR type LJF99_15935 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_15935 IPR036390 Winged helix DNA-binding domain superfamily LJF99_15960 IPR010105 TonB-dependent siderophore receptor LJF99_15960 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_15960 IPR039423 TonB-dependent receptor-like LJF99_15960 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_15960 IPR012910 TonB-dependent receptor, plug domain LJF99_15960 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_15975 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase LJF99_15990 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX LJF99_15995 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase LJF99_15995 IPR039793 Uroporphyrinogen-III synthase LJF99_15995 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily LJF99_16000 IPR000860 Porphobilinogen deaminase LJF99_16000 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site LJF99_16000 IPR022417 Porphobilinogen deaminase, N-terminal LJF99_16000 IPR022418 Porphobilinogen deaminase, C-terminal LJF99_16000 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily LJF99_16005 IPR000274 Adenylate cyclase, class-I LJF99_16005 IPR024685 Adenylate cyclase class-I, N-terminal domain LJF99_16005 IPR024686 Adenylate cyclase class-I, conserved site LJF99_16015 IPR025959 Winged helix-turn helix domain LJF99_16015 IPR038717 Tc1-like transposase, DDE domain LJF99_16015 IPR012337 Ribonuclease H-like superfamily LJF99_16015 IPR009057 Homeobox-like domain superfamily LJF99_16025 IPR036524 Frataxin/CyaY superfamily LJF99_16025 IPR020895 Frataxin conserved site LJF99_16025 IPR002908 Frataxin/CyaY LJF99_16035 IPR002986 Diaminopimelate decarboxylase, LysA LJF99_16035 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal LJF99_16035 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LJF99_16035 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LJF99_16035 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site LJF99_16035 IPR000183 Ornithine/DAP/Arg decarboxylase LJF99_16035 IPR029066 PLP-binding barrel LJF99_16035 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LJF99_16040 IPR018510 Diaminopimelate epimerase, active site LJF99_16040 IPR001653 Diaminopimelate epimerase, DapF LJF99_16050 IPR002104 Integrase, catalytic domain LJF99_16050 IPR010998 Integrase/recombinase, N-terminal LJF99_16050 IPR004107 Integrase, SAM-like, N-terminal LJF99_16050 IPR011931 Tyrosine recombinase XerC LJF99_16050 IPR023009 Tyrosine recombinase XerC/XerD LJF99_16050 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_16050 IPR013762 Integrase-like, catalytic domain superfamily LJF99_16055 IPR036412 HAD-like superfamily LJF99_16055 IPR006439 HAD hydrolase, subfamily IA LJF99_16055 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_16055 IPR023214 HAD superfamily LJF99_16065 IPR010920 LSM domain superfamily LJF99_16065 IPR006685 Mechanosensitive ion channel MscS LJF99_16065 IPR011066 Mechanosensitive ion channel MscS, C-terminal LJF99_16065 IPR006686 Mechanosensitive ion channel MscS, conserved site LJF99_16065 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LJF99_16065 IPR023408 Mechanosensitive ion channel MscS domain superfamily LJF99_16075 IPR029062 Class I glutamine amidotransferase-like LJF99_16075 IPR017926 Glutamine amidotransferase LJF99_16075 IPR011697 Peptidase C26 LJF99_16080 IPR000150 Cof family LJF99_16080 IPR036412 HAD-like superfamily LJF99_16080 IPR006379 HAD-superfamily hydrolase, subfamily IIB LJF99_16080 IPR023214 HAD superfamily LJF99_16095 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_16095 IPR017871 ABC transporter, conserved site LJF99_16095 IPR003439 ABC transporter-like LJF99_16095 IPR000412 ABC-2 transporter LJF99_16095 IPR003593 AAA+ ATPase domain LJF99_16105 IPR036653 CinA-like, C-terminal LJF99_16105 IPR008136 CinA, C-terminal LJF99_16105 IPR008135 Competence-induced protein CinA LJF99_16105 IPR036425 MoaB/Mog-like domain superfamily LJF99_16105 IPR001453 MoaB/Mog domain LJF99_16110 IPR003607 HD/PDEase domain LJF99_16110 IPR006674 HD domain LJF99_16110 IPR006675 HDIG domain LJF99_16110 IPR004087 K Homology domain LJF99_16110 IPR004088 K Homology domain, type 1 LJF99_16110 IPR036612 K Homology domain, type 1 superfamily LJF99_16110 IPR017705 Ribonuclease Y LJF99_16110 IPR022711 Ribonuclease Y, N-terminal LJF99_16115 IPR029062 Class I glutamine amidotransferase-like LJF99_16115 IPR005697 Homoserine O-succinyltransferase MetA LJF99_16115 IPR033752 MetA family LJF99_16125 IPR000485 AsnC-type HTH domain LJF99_16125 IPR011008 Dimeric alpha-beta barrel LJF99_16125 IPR019888 Transcription regulator AsnC-type LJF99_16125 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LJF99_16125 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LJF99_16125 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_16125 IPR036390 Winged helix DNA-binding domain superfamily LJF99_16130 IPR012160 Lipoteichoic acid synthase-like LJF99_16130 IPR000917 Sulfatase, N-terminal LJF99_16130 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_16145 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_16145 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain LJF99_16145 IPR013780 Glycosyl hydrolase, all-beta LJF99_16145 IPR017853 Glycoside hydrolase superfamily LJF99_16145 IPR013783 Immunoglobulin-like fold LJF99_16145 IPR032091 Maltogenic Amylase, C-terminal LJF99_16150 IPR003416 MgtC/SapB/SrpB/YhiD family LJF99_16170 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_16170 IPR036291 NAD(P)-binding domain superfamily LJF99_16170 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_16175 IPR005322 Peptidase C69, dipeptidase A LJF99_16190 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LJF99_16190 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LJF99_16200 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_16200 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase LJF99_16200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_16200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_16200 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LJF99_16210 IPR036390 Winged helix DNA-binding domain superfamily LJF99_16210 IPR039424 Solute-binding protein family 5 LJF99_16210 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain LJF99_16210 IPR000914 Solute-binding protein family 5 domain LJF99_16210 IPR023767 Transcriptional regulator SgrR LJF99_16215 IPR000763 Catalase-peroxidase haem LJF99_16215 IPR002016 Haem peroxidase LJF99_16215 IPR010255 Haem peroxidase superfamily LJF99_16215 IPR019794 Peroxidase, active site LJF99_16230 IPR004961 Lipase chaperone LJF99_16235 IPR029058 Alpha/Beta hydrolase fold LJF99_16235 IPR000073 Alpha/beta hydrolase fold-1 LJF99_16245 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily LJF99_16245 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily LJF99_16245 IPR019831 Manganese/iron superoxide dismutase, N-terminal LJF99_16245 IPR019833 Manganese/iron superoxide dismutase, binding site LJF99_16245 IPR019832 Manganese/iron superoxide dismutase, C-terminal LJF99_16245 IPR001189 Manganese/iron superoxide dismutase LJF99_16250 IPR003848 Domain of unknown function DUF218 LJF99_16255 IPR013783 Immunoglobulin-like fold LJF99_16255 IPR013661 Peptidase M9, collagenase, N-terminal domain LJF99_16255 IPR002169 Peptidase M9A/M9B, collagenase, bacterial LJF99_16255 IPR022409 PKD/Chitinase domain LJF99_16255 IPR000601 PKD domain LJF99_16255 IPR035986 PKD domain superfamily LJF99_16265 IPR008966 Adhesion domain superfamily LJF99_16265 IPR000259 Fimbrial-type adhesion domain LJF99_16265 IPR036937 Fimbrial-type adhesion domain superfamily LJF99_16275 IPR018030 Fimbrial membrane usher, conserved site LJF99_16275 IPR037224 PapC, N-terminal domain superfamily LJF99_16275 IPR025885 PapC, N-terminal domain LJF99_16275 IPR000015 Outer membrane usher protein LJF99_16275 IPR042186 Outer membrane usher protein FimD, plug domain LJF99_16275 IPR025949 PapC-like, C-terminal domain LJF99_16280 IPR013783 Immunoglobulin-like fold LJF99_16280 IPR008962 PapD-like superfamily LJF99_16280 IPR036316 Pili assembly chaperone, C-terminal domain superfamily LJF99_16280 IPR001829 Pili assembly chaperone, bacterial LJF99_16280 IPR016148 Pili assembly chaperone, C-terminal LJF99_16280 IPR018046 Pili assembly chaperone, conserved site LJF99_16280 IPR016147 Pili assembly chaperone, N-terminal LJF99_16285 IPR008966 Adhesion domain superfamily LJF99_16285 IPR000259 Fimbrial-type adhesion domain LJF99_16285 IPR036937 Fimbrial-type adhesion domain superfamily LJF99_16290 IPR000259 Fimbrial-type adhesion domain LJF99_16290 IPR008966 Adhesion domain superfamily LJF99_16290 IPR036937 Fimbrial-type adhesion domain superfamily LJF99_16300 IPR011006 CheY-like superfamily LJF99_16300 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_16300 IPR001789 Signal transduction response regulator, receiver domain LJF99_16300 IPR039420 Transcriptional regulatory protein WalR-like LJF99_16300 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_16305 IPR020845 AMP-binding, conserved site LJF99_16305 IPR000873 AMP-dependent synthetase/ligase LJF99_16305 IPR042099 AMP-dependent synthetase-like superfamily LJF99_16305 IPR010192 2-succinylbenzoate--CoA ligase LJF99_16310 IPR010196 o-Succinylbenzoate synthase, MenC type1 LJF99_16310 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LJF99_16310 IPR029017 Enolase-like, N-terminal LJF99_16310 IPR029065 Enolase C-terminal domain-like LJF99_16310 IPR036849 Enolase-like, C-terminal domain superfamily LJF99_16315 IPR029045 ClpP/crotonase-like domain superfamily LJF99_16315 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB LJF99_16315 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LJF99_16315 IPR001753 Enoyl-CoA hydratase/isomerase LJF99_16315 IPR014748 Enoyl-CoA hydratase, C-terminal LJF99_16320 IPR029058 Alpha/Beta hydrolase fold LJF99_16320 IPR000073 Alpha/beta hydrolase fold-1 LJF99_16320 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase LJF99_16325 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LJF99_16325 IPR029061 Thiamin diphosphate-binding fold LJF99_16325 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LJF99_16325 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase LJF99_16325 IPR032264 Menaquinone biosynthesis protein MenD, middle domain LJF99_16325 IPR029035 DHS-like NAD/FAD-binding domain superfamily LJF99_16330 IPR034681 Isochorismate synthase MenF LJF99_16330 IPR005801 ADC synthase LJF99_16330 IPR015890 Chorismate-utilising enzyme, C-terminal LJF99_16330 IPR004561 Isochorismate synthase LJF99_16335 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase LJF99_16335 IPR000537 UbiA prenyltransferase family LJF99_16335 IPR026046 UbiA prenyltransferase domain containing protein 1 LJF99_16365 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_16365 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain LJF99_16365 IPR011545 DEAD/DEAH box helicase domain LJF99_16365 IPR028619 ATP-dependent RNA helicase DbpA LJF99_16365 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_16365 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LJF99_16365 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_16365 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_16365 IPR001650 Helicase, C-terminal LJF99_16370 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LJF99_16370 IPR011657 Concentrative nucleoside transporter C-terminal domain LJF99_16370 IPR008276 Concentrative nucleoside transporter LJF99_16370 IPR002668 Concentrative nucleoside transporter N-terminal domain LJF99_16370 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LJF99_16375 IPR016956 Inner membrane protein YdjM LJF99_16375 IPR007404 LexA-binding, inner membrane-associated putative hydrolase LJF99_16390 IPR003791 Protein of unknown function UPF0178 LJF99_16395 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB LJF99_16395 IPR023714 Zinc transport protein ZntB LJF99_16410 IPR012724 Chaperone DnaJ LJF99_16410 IPR002939 Chaperone DnaJ, C-terminal LJF99_16410 IPR001623 DnaJ domain LJF99_16410 IPR018253 DnaJ domain, conserved site LJF99_16410 IPR008971 HSP40/DnaJ peptide-binding LJF99_16410 IPR001305 Heat shock protein DnaJ, cysteine-rich domain LJF99_16410 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily LJF99_16410 IPR036869 Chaperone J-domain superfamily LJF99_16415 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_16415 IPR005170 Transporter-associated domain LJF99_16415 IPR023729 K(+)/H(+) antiporter NhaP2 LJF99_16415 IPR006037 Regulator of K+ conductance, C-terminal LJF99_16415 IPR030151 K(+)/H(+) antiporter NhaP LJF99_16415 IPR006153 Cation/H+ exchanger LJF99_16415 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_16415 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_16415 IPR038770 Sodium/solute symporter superfamily LJF99_16420 IPR007761 Mannitol repressor MtlR-like LJF99_16420 IPR038026 MtlR-like superfamily LJF99_16425 IPR036291 NAD(P)-binding domain superfamily LJF99_16425 IPR013131 Mannitol dehydrogenase, N-terminal LJF99_16425 IPR023027 Mannitol dehydrogenase, conserved site LJF99_16425 IPR013118 Mannitol dehydrogenase, C-terminal LJF99_16425 IPR000669 Mannitol dehydrogenase LJF99_16425 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LJF99_16425 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LJF99_16425 IPR023028 Mannitol-1-phosphate 5-dehydrogenase LJF99_16430 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC LJF99_16430 IPR013014 Phosphotransferase system, EIIC component, type 2 LJF99_16430 IPR003352 Phosphotransferase system, EIIC LJF99_16430 IPR029503 Phosphotransferase system EIIB component, mannitol-specific LJF99_16430 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LJF99_16430 IPR013011 Phosphotransferase system, EIIB component, type 2 LJF99_16430 IPR002178 PTS EIIA type-2 domain LJF99_16430 IPR016152 Phosphotransferase/anion transporter LJF99_16430 IPR036095 PTS system IIB component-like superfamily LJF99_16445 IPR013223 Ribonuclease B, N-terminal OB domain LJF99_16445 IPR011129 Cold shock domain LJF99_16445 IPR040476 RNase II/RNase R, cold shock domain LJF99_16445 IPR012340 Nucleic acid-binding, OB-fold LJF99_16445 IPR011804 Ribonuclease II LJF99_16445 IPR001900 Ribonuclease II/R LJF99_16445 IPR022966 Ribonuclease II/R, conserved site LJF99_16445 IPR004476 Ribonuclease II/ribonuclease R LJF99_16450 IPR005119 LysR, substrate-binding LJF99_16450 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria LJF99_16450 IPR017685 HTH-type transcriptional regulator ArgP LJF99_16450 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_16450 IPR036390 Winged helix DNA-binding domain superfamily LJF99_16450 IPR000847 Transcription regulator HTH, LysR LJF99_16455 IPR018311 Autoinducer synthesis, conserved site LJF99_16455 IPR001690 Autoinducer synthase LJF99_16455 IPR016181 Acyl-CoA N-acyltransferase LJF99_16460 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_16460 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily LJF99_16460 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LJF99_16460 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_16460 IPR000792 Transcription regulator LuxR, C-terminal LJF99_16465 IPR001123 Amino acid exporter protein, LeuE-type LJF99_16465 IPR004777 L-lysine exporter/arginine exporter LJF99_16470 IPR029052 Metallo-dependent phosphatase-like LJF99_16470 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase LJF99_16470 IPR041827 CpdB, N-terminal metallophosphatase domain LJF99_16470 IPR006179 5'-Nucleotidase/apyrase LJF99_16470 IPR006146 5'-Nucleotidase, conserved site LJF99_16470 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LJF99_16470 IPR008334 5'-Nucleotidase, C-terminal LJF99_16470 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LJF99_16475 IPR008816 Glycine zipper 2TM domain LJF99_16480 IPR023072 Acetyltransferase, YpeA LJF99_16480 IPR016181 Acyl-CoA N-acyltransferase LJF99_16480 IPR000182 GNAT domain LJF99_16485 IPR020483 Uncharacterised protein family YgbA LJF99_16490 IPR000587 Creatinase, N-terminal LJF99_16490 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LJF99_16490 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LJF99_16490 IPR036005 Creatinase/aminopeptidase-like LJF99_16490 IPR000994 Peptidase M24 LJF99_16495 IPR036390 Winged helix DNA-binding domain superfamily LJF99_16495 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_16495 IPR000524 Transcription regulator HTH, GntR LJF99_16495 IPR008920 Transcription regulator FadR/GntR, C-terminal LJF99_16500 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal LJF99_16500 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal LJF99_16500 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising LJF99_16500 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site LJF99_16505 IPR016154 Heat shock protein Hsp33, C-terminal LJF99_16505 IPR016153 Heat shock protein Hsp33, N-terminal LJF99_16505 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily LJF99_16505 IPR000397 Heat shock protein Hsp33 LJF99_16510 IPR025708 Heat shock protein 15 LJF99_16510 IPR002942 RNA-binding S4 domain LJF99_16510 IPR036986 RNA-binding S4 domain superfamily LJF99_16515 IPR036034 PDZ superfamily LJF99_16515 IPR024961 Type II secretion system protein C, N-terminal LJF99_16515 IPR001639 Type II secretion system protein C LJF99_16520 IPR004845 Type II secretion system GspD, conserved site LJF99_16520 IPR013356 Type II secretion system GspD LJF99_16520 IPR001775 GspD/PilQ family LJF99_16520 IPR038591 NolW-like superfamily LJF99_16520 IPR005644 NolW-like LJF99_16520 IPR004846 Type II/III secretion system LJF99_16525 IPR042181 Type II secretion system, protein E, N-terminal LJF99_16525 IPR013369 Type II secretion system GspE LJF99_16525 IPR001482 Type II/IV secretion system protein LJF99_16525 IPR003593 AAA+ ATPase domain LJF99_16525 IPR037257 General secretory system II, protein E, N-terminal superfamily LJF99_16525 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_16530 IPR003004 GspF/PilC family LJF99_16530 IPR011850 General secretion pathway protein F LJF99_16530 IPR001992 Type II secretion system conserved site LJF99_16530 IPR018076 Type II secretion system F domain LJF99_16530 IPR042094 Type II secretion system F domain superfamily LJF99_16535 IPR000983 Bacterial general secretion pathway protein G-type pilin LJF99_16535 IPR012902 Prokaryotic N-terminal methylation site LJF99_16535 IPR013545 Type II secretion system protein G LJF99_16535 IPR010054 General secretion pathway protein G LJF99_16540 IPR002416 Type II secretion system protein H LJF99_16540 IPR012902 Prokaryotic N-terminal methylation site LJF99_16540 IPR022346 General secretion pathway, GspH LJF99_16545 IPR010052 Type II secretion system protein I LJF99_16545 IPR003413 Type II secretion system protein I domain LJF99_16545 IPR012902 Prokaryotic N-terminal methylation site LJF99_16550 IPR012902 Prokaryotic N-terminal methylation site LJF99_16550 IPR010055 Type II secretion system protein J LJF99_16555 IPR005628 General secretion pathway protein K LJF99_16555 IPR038072 GspK, central domain superfamily LJF99_16560 IPR024230 GspL, cytoplasmic actin-ATPase-like domain LJF99_16560 IPR025691 GspL periplasmic domain LJF99_16560 IPR007812 Type II secretion system protein L LJF99_16565 IPR023229 Type II secretion system protein M, periplasmic domain superfamily LJF99_16565 IPR007690 Type II secretion system, protein M LJF99_16570 IPR000645 Type II secretion system protein N, conserved site LJF99_16570 IPR022792 Type II secretion system, protein N LJF99_16575 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_16575 IPR000792 Transcription regulator LuxR, C-terminal LJF99_16575 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_16580 IPR002307 Tyrosine-tRNA ligase LJF99_16580 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 LJF99_16580 IPR024088 Tyrosine-tRNA ligase, bacterial-type LJF99_16580 IPR036986 RNA-binding S4 domain superfamily LJF99_16580 IPR002942 RNA-binding S4 domain LJF99_16580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_16580 IPR002305 Aminoacyl-tRNA synthetase, class Ic LJF99_16580 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_16585 IPR036412 HAD-like superfamily LJF99_16585 IPR006439 HAD hydrolase, subfamily IA LJF99_16585 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_16585 IPR023214 HAD superfamily LJF99_16590 IPR000086 NUDIX hydrolase domain LJF99_16590 IPR020084 NUDIX hydrolase, conserved site LJF99_16590 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_16595 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ LJF99_16595 IPR020583 Inositol monophosphatase, metal-binding site LJF99_16595 IPR000760 Inositol monophosphatase-like LJF99_16595 IPR020550 Inositol monophosphatase, conserved site LJF99_16600 IPR004694 Hydroxy amino acid transporter LJF99_16600 IPR018227 Amino acid/polyamine transporter 2 LJF99_16605 IPR008231 Probable chaperone CsaA LJF99_16605 IPR012340 Nucleic acid-binding, OB-fold LJF99_16605 IPR002547 tRNA-binding domain LJF99_16610 IPR011051 RmlC-like cupin domain superfamily LJF99_16610 IPR014710 RmlC-like jelly roll fold LJF99_16610 IPR020449 Transcription regulator HTH, AraC- type LJF99_16610 IPR009057 Homeobox-like domain superfamily LJF99_16610 IPR018060 DNA binding HTH domain, AraC-type LJF99_16610 IPR018062 HTH domain AraC-type, conserved site LJF99_16610 IPR003313 AraC-type arabinose-binding/dimerisation domain LJF99_16610 IPR023699 Transcription activator HTH, RhaR LJF99_16615 IPR002084 Methionine repressor MetJ LJF99_16615 IPR023453 Methionine repressor MetJ domain superfamily LJF99_16615 IPR010985 Ribbon-helix-helix LJF99_16620 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_16620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_16620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_16620 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LJF99_16620 IPR011821 O-succinylhomoserine (thiol)-lyase LJF99_16625 IPR036291 NAD(P)-binding domain superfamily LJF99_16625 IPR019811 Homoserine dehydrogenase, conserved site LJF99_16625 IPR001342 Homoserine dehydrogenase, catalytic LJF99_16625 IPR018042 Aspartate kinase, conserved site LJF99_16625 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding LJF99_16625 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_16625 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain LJF99_16625 IPR036393 Acetylglutamate kinase-like superfamily LJF99_16625 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I LJF99_16625 IPR001341 Aspartate kinase LJF99_16640 IPR005261 Conserved hypothetical protein CHP00659 LJF99_16640 IPR007300 CidB/LrgB family LJF99_16645 IPR023760 Holin-like protein CidA LJF99_16645 IPR005538 LrgA/CidA family LJF99_16660 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_16660 IPR004839 Aminotransferase, class I/classII LJF99_16660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_16660 IPR000524 Transcription regulator HTH, GntR LJF99_16660 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_16660 IPR036390 Winged helix DNA-binding domain superfamily LJF99_16680 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LJF99_16680 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily LJF99_16680 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain LJF99_16685 IPR036653 CinA-like, C-terminal LJF99_16685 IPR008136 CinA, C-terminal LJF99_16690 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface LJF99_16690 IPR023400 DNA recombination and repair protein RecA, C-terminal LJF99_16690 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_16690 IPR020584 DNA recombination/repair protein RecA, conserved site LJF99_16690 IPR013765 DNA recombination and repair protein RecA LJF99_16690 IPR003593 AAA+ ATPase domain LJF99_16690 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain LJF99_16695 IPR003783 Regulatory protein RecX LJF99_16695 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_16700 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LJF99_16700 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_16700 IPR002318 Alanine-tRNA ligase, class IIc LJF99_16700 IPR003156 DHHA1 domain LJF99_16700 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LJF99_16700 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily LJF99_16700 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal LJF99_16700 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria LJF99_16700 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain LJF99_16705 IPR001341 Aspartate kinase LJF99_16705 IPR018042 Aspartate kinase, conserved site LJF99_16705 IPR027795 CASTOR, ACT domain LJF99_16705 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_16705 IPR041740 Aspartokinase catalytic domain LJF99_16705 IPR002912 ACT domain LJF99_16705 IPR005260 Aspartate kinase, monofunctional class LJF99_16705 IPR036393 Acetylglutamate kinase-like superfamily LJF99_16710 IPR003751 Translational regulator CsrA LJF99_16710 IPR036107 Carbon storage regulator superfamily LJF99_16735 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LJF99_16735 IPR012338 Beta-lactamase/transpeptidase-like LJF99_16735 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LJF99_16740 IPR032816 SNARE associated Golgi protein LJF99_16740 IPR032818 DedA family LJF99_16745 IPR002550 CNNM, transmembrane domain LJF99_16745 IPR000644 CBS domain LJF99_16745 IPR005170 Transporter-associated domain LJF99_16745 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_16745 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_16750 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm LJF99_16750 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LJF99_16750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_16750 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LJF99_16750 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LJF99_16750 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LJF99_16750 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LJF99_16750 IPR002303 Valine-tRNA ligase LJF99_16750 IPR033705 Valyl tRNA synthetase, anticodon-binding domain LJF99_16750 IPR002300 Aminoacyl-tRNA synthetase, class Ia LJF99_16750 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_16755 IPR036768 DNA polymerase III subunit chi superfamily LJF99_16755 IPR007459 DNA polymerase III chi subunit, HolC LJF99_16760 IPR023042 Peptidase M17, leucine aminopeptidase LJF99_16760 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal LJF99_16760 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LJF99_16760 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LJF99_16765 IPR005495 Permease LptG/LptF-related LJF99_16765 IPR030922 LPS export ABC transporter permease LptF LJF99_16770 IPR005495 Permease LptG/LptF-related LJF99_16770 IPR030923 LPS export ABC transporter permease LptG LJF99_16915 IPR030935 Phage portal protein PBSX family, Proteobacteria LJF99_16915 IPR006430 Phage portal protein PBSX family LJF99_16990 IPR009679 Bacteriophage 186, CII LJF99_17000 IPR001387 Cro/C1-type helix-turn-helix domain LJF99_17000 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_17000 IPR039418 LexA-like LJF99_17000 IPR036286 LexA/Signal peptidase-like superfamily LJF99_17000 IPR015927 Peptidase S24/S26A/S26B/S26C LJF99_17005 IPR004107 Integrase, SAM-like, N-terminal LJF99_17005 IPR010998 Integrase/recombinase, N-terminal LJF99_17005 IPR002104 Integrase, catalytic domain LJF99_17005 IPR013762 Integrase-like, catalytic domain superfamily LJF99_17005 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_17005 IPR023009 Tyrosine recombinase XerC/XerD LJF99_17005 IPR011931 Tyrosine recombinase XerC LJF99_17010 IPR010998 Integrase/recombinase, N-terminal LJF99_17010 IPR025166 Integrase, DNA-binding domain LJF99_17010 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_17010 IPR002104 Integrase, catalytic domain LJF99_17010 IPR013762 Integrase-like, catalytic domain superfamily LJF99_17010 IPR038488 Integrase, DNA-binding domain superfamily LJF99_17015 IPR009057 Homeobox-like domain superfamily LJF99_17015 IPR012337 Ribonuclease H-like superfamily LJF99_17015 IPR038717 Tc1-like transposase, DDE domain LJF99_17015 IPR025959 Winged helix-turn helix domain LJF99_17020 IPR004385 Nucleoside diphosphate pyrophosphatase LJF99_17020 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_17020 IPR020084 NUDIX hydrolase, conserved site LJF99_17020 IPR000086 NUDIX hydrolase domain LJF99_17025 IPR009659 Protein of unknown function DUF1249 LJF99_17030 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LJF99_17030 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA LJF99_17030 IPR029052 Metallo-dependent phosphatase-like LJF99_17035 IPR029058 Alpha/Beta hydrolase fold LJF99_17035 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LJF99_17040 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_17040 IPR000086 NUDIX hydrolase domain LJF99_17050 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative LJF99_17050 IPR006171 TOPRIM domain LJF99_17050 IPR018522 DNA topoisomerase, type IIA, conserved site LJF99_17050 IPR002288 DNA gyrase B subunit, C-terminal LJF99_17050 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal LJF99_17050 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LJF99_17050 IPR001241 DNA topoisomerase, type IIA LJF99_17050 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_17050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_17050 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_17050 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_17050 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 LJF99_17055 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat LJF99_17055 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal LJF99_17055 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LJF99_17055 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal LJF99_17055 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta LJF99_17055 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily LJF99_17055 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative LJF99_17090 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily LJF99_17090 IPR036869 Chaperone J-domain superfamily LJF99_17090 IPR008971 HSP40/DnaJ peptide-binding LJF99_17090 IPR012724 Chaperone DnaJ LJF99_17090 IPR001305 Heat shock protein DnaJ, cysteine-rich domain LJF99_17090 IPR001623 DnaJ domain LJF99_17090 IPR018253 DnaJ domain, conserved site LJF99_17090 IPR002939 Chaperone DnaJ, C-terminal LJF99_17095 IPR032808 DoxX family LJF99_17100 IPR017937 Thioredoxin, conserved site LJF99_17100 IPR036249 Thioredoxin-like superfamily LJF99_17100 IPR005746 Thioredoxin LJF99_17100 IPR013766 Thioredoxin domain LJF99_17120 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase LJF99_17120 IPR002123 Phospholipid/glycerol acyltransferase LJF99_17125 IPR007157 PspA/IM30 LJF99_17125 IPR014319 Phage shock protein, PspA LJF99_17140 IPR000305 GIY-YIG endonuclease LJF99_17140 IPR035901 GIY-YIG endonuclease superfamily LJF99_17140 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease LJF99_17150 IPR000620 EamA domain LJF99_17150 IPR004626 RarD protein LJF99_17155 IPR005122 Uracil-DNA glycosylase-like LJF99_17155 IPR036895 Uracil-DNA glycosylase-like domain superfamily LJF99_17165 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17165 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17165 IPR000847 Transcription regulator HTH, LysR LJF99_17165 IPR005119 LysR, substrate-binding LJF99_17170 IPR001626 ABC transporter, TroCD-like LJF99_17170 IPR037294 ABC transporter, BtuC-like LJF99_17175 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_17175 IPR017871 ABC transporter, conserved site LJF99_17175 IPR003439 ABC transporter-like LJF99_17175 IPR003593 AAA+ ATPase domain LJF99_17175 IPR017882 Zinc import ATP-binding protein ZnuC LJF99_17180 IPR035520 High-affinity zinc uptake system protein ZnuA LJF99_17180 IPR006127 Periplasmic solute binding protein, ZnuA-like LJF99_17200 IPR016047 Peptidase M23 LJF99_17200 IPR013731 Opacity-associated protein A, N-terminal LJF99_17200 IPR018392 LysM domain LJF99_17200 IPR011055 Duplicated hybrid motif LJF99_17205 IPR023514 Glyoxylate/hydroxypyruvate reductase A LJF99_17205 IPR036291 NAD(P)-binding domain superfamily LJF99_17205 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LJF99_17210 IPR023381 YP001051499.1-like domain superfamily LJF99_17210 IPR007338 Protein of unknown function DUF416 LJF99_17225 IPR000060 BCCT transporter family LJF99_17225 IPR018093 BCCT transporter, conserved site LJF99_17230 IPR007695 DNA mismatch repair protein MutS-like, N-terminal LJF99_17230 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_17230 IPR036678 MutS, connector domain superfamily LJF99_17230 IPR036187 DNA mismatch repair protein MutS, core domain superfamily LJF99_17230 IPR007860 DNA mismatch repair protein MutS, connector domain LJF99_17230 IPR007696 DNA mismatch repair protein MutS, core LJF99_17230 IPR007861 DNA mismatch repair protein MutS, clamp LJF99_17230 IPR005748 DNA mismatch repair protein MutS LJF99_17230 IPR000432 DNA mismatch repair protein MutS, C-terminal LJF99_17230 IPR017261 DNA mismatch repair protein MutS/MSH LJF99_17230 IPR016151 DNA mismatch repair protein MutS, N-terminal LJF99_17240 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD LJF99_17240 IPR036249 Thioredoxin-like superfamily LJF99_17250 IPR004706 Arsenical-resistance protein Acr3 LJF99_17250 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 LJF99_17250 IPR038770 Sodium/solute symporter superfamily LJF99_17255 IPR006659 Arsenate reductase LJF99_17255 IPR006660 Arsenate reductase-like LJF99_17255 IPR036249 Thioredoxin-like superfamily LJF99_17260 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_17270 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_17270 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type LJF99_17270 IPR021135 Phosphoenolpyruvate carboxylase LJF99_17270 IPR033129 Phosphoenolpyruvate carboxylase, His active site LJF99_17270 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site LJF99_17275 IPR010169 Acetylornithine deacetylase ArgE LJF99_17275 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LJF99_17275 IPR036264 Bacterial exopeptidase dimerisation domain LJF99_17275 IPR002933 Peptidase M20 LJF99_17275 IPR011650 Peptidase M20, dimerisation domain LJF99_17280 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site LJF99_17280 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 LJF99_17280 IPR036291 NAD(P)-binding domain superfamily LJF99_17280 IPR000534 Semialdehyde dehydrogenase, NAD-binding LJF99_17280 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LJF99_17285 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_17285 IPR004662 Acetylglutamate kinase family LJF99_17285 IPR036393 Acetylglutamate kinase-like superfamily LJF99_17285 IPR037528 Acetylglutamate kinase ArgB LJF99_17290 IPR006130 Aspartate/ornithine carbamoyltransferase LJF99_17290 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LJF99_17290 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LJF99_17290 IPR002292 Ornithine/putrescine carbamoyltransferase LJF99_17290 IPR024904 Ornithine carbamoyltransferase LJF99_17290 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LJF99_17295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_17295 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body LJF99_17295 IPR018223 Argininosuccinate synthase, conserved site LJF99_17295 IPR001518 Argininosuccinate synthase LJF99_17295 IPR023434 Argininosuccinate synthase, type 1 subfamily LJF99_17300 IPR029419 Argininosuccinate lyase, C-terminal LJF99_17300 IPR009049 Argininosuccinate lyase LJF99_17300 IPR024083 Fumarase/histidase, N-terminal LJF99_17300 IPR020557 Fumarate lyase, conserved site LJF99_17300 IPR000362 Fumarate lyase family LJF99_17300 IPR022761 Fumarate lyase, N-terminal LJF99_17300 IPR008948 L-Aspartase-like LJF99_17305 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17305 IPR005119 LysR, substrate-binding LJF99_17305 IPR000847 Transcription regulator HTH, LysR LJF99_17305 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17315 IPR037479 Tautomerase, MSAD family LJF99_17315 IPR014347 Tautomerase/MIF superfamily LJF99_17345 IPR024688 Maltose/galactoside acetyltransferase LJF99_17345 IPR018357 Hexapeptide transferase, conserved site LJF99_17345 IPR011004 Trimeric LpxA-like superfamily LJF99_17345 IPR001451 Hexapeptide repeat LJF99_17350 IPR025105 Domain of unknown function DUF4010 LJF99_17355 IPR034408 Sulphate/thiosulphate-binding site LJF99_17355 IPR005669 Thiosulphate/Sulfate-binding protein LJF99_17355 IPR000957 Sulphate/thiosulphate-binding, conserved site LJF99_17365 IPR011865 Sulphate ABC transporter, permease protein CysT LJF99_17365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_17365 IPR035906 MetI-like superfamily LJF99_17365 IPR005667 Sulphate ABC transporter permease protein 2 LJF99_17370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_17370 IPR011866 Sulphate ABC transporter, permease protein CysW LJF99_17370 IPR035906 MetI-like superfamily LJF99_17370 IPR005667 Sulphate ABC transporter permease protein 2 LJF99_17375 IPR024765 TOBE-like domain LJF99_17375 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_17375 IPR005666 Sulphate transport system permease protein 1 LJF99_17375 IPR017871 ABC transporter, conserved site LJF99_17375 IPR003439 ABC transporter-like LJF99_17375 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal LJF99_17375 IPR003593 AAA+ ATPase domain LJF99_17375 IPR008995 Molybdate/tungstate binding, C-terminal LJF99_17380 IPR037408 HTH-type transcriptional regulator cbl, PBP2 domain LJF99_17380 IPR005119 LysR, substrate-binding LJF99_17380 IPR000847 Transcription regulator HTH, LysR LJF99_17380 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17380 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17385 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LJF99_17385 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LJF99_17385 IPR004450 Threonine synthase-like LJF99_17385 IPR001926 Pyridoxal-phosphate dependent enzyme LJF99_17385 IPR026260 Threonine synthase, bacterial/archaeal LJF99_17390 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_17390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_17390 IPR035906 MetI-like superfamily LJF99_17395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_17395 IPR035906 MetI-like superfamily LJF99_17395 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_17400 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LJF99_17400 IPR017871 ABC transporter, conserved site LJF99_17400 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_17400 IPR003593 AAA+ ATPase domain LJF99_17400 IPR003439 ABC transporter-like LJF99_17405 IPR001320 Ionotropic glutamate receptor LJF99_17405 IPR018313 Solute-binding protein family 3, conserved site LJF99_17405 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_17410 IPR020879 N-acetylglucosamine-binding protein A LJF99_17410 IPR041029 N-acetylglucosamine binding protein A domain 2 LJF99_17410 IPR004302 Cellulose/chitin-binding protein, N-terminal LJF99_17410 IPR014756 Immunoglobulin E-set LJF99_17415 IPR033480 Single Cache domain 2 LJF99_17415 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_17415 IPR003660 HAMP domain LJF99_17415 IPR004090 Chemotaxis methyl-accepting receptor LJF99_17460 IPR001173 Glycosyltransferase 2-like LJF99_17460 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA LJF99_17460 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_17495 IPR016905 Glycyl radical enzyme, HI0521, predicted LJF99_17510 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17510 IPR005119 LysR, substrate-binding LJF99_17510 IPR037416 Nodulation protein D, PBP2 LJF99_17510 IPR000847 Transcription regulator HTH, LysR LJF99_17510 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17515 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LJF99_17515 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_17515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_17515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_17515 IPR000796 Aspartate/other aminotransferase LJF99_17515 IPR004839 Aminotransferase, class I/classII LJF99_17520 IPR003735 Metal-sensitive transcriptional repressor LJF99_17520 IPR038390 Metal-sensitive transcriptional repressor superfamily LJF99_17535 IPR040671 Pullulanase, N2 domain LJF99_17535 IPR041111 Pullulanase, Ins domain LJF99_17535 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal LJF99_17535 IPR013783 Immunoglobulin-like fold LJF99_17535 IPR014756 Immunoglobulin E-set LJF99_17535 IPR017853 Glycoside hydrolase superfamily LJF99_17535 IPR013780 Glycosyl hydrolase, all-beta LJF99_17535 IPR004193 Glycoside hydrolase, family 13, N-terminal LJF99_17535 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_17535 IPR005323 Pullulanase, carbohydrate-binding module 41 LJF99_17535 IPR013784 Carbohydrate-binding-like fold LJF99_17535 IPR011839 Alpha-1,6-glucosidases, pullulanase-type LJF99_17540 IPR001757 P-type ATPase LJF99_17540 IPR027256 P-type ATPase, subfamily IB LJF99_17540 IPR036163 Heavy metal-associated domain superfamily LJF99_17540 IPR006121 Heavy metal-associated domain, HMA LJF99_17540 IPR023299 P-type ATPase, cytoplasmic domain N LJF99_17540 IPR018303 P-type ATPase, phosphorylation site LJF99_17540 IPR008250 P-type ATPase, A domain superfamily LJF99_17540 IPR036412 HAD-like superfamily LJF99_17540 IPR023214 HAD superfamily LJF99_17540 IPR023298 P-type ATPase, transmembrane domain superfamily LJF99_17540 IPR017969 Heavy-metal-associated, conserved site LJF99_17545 IPR002065 Thiol peroxidase Tpx LJF99_17545 IPR013766 Thioredoxin domain LJF99_17545 IPR036249 Thioredoxin-like superfamily LJF99_17545 IPR013740 Redoxin LJF99_17545 IPR018219 Thiol peroxidase conserved site LJF99_17555 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_17555 IPR014014 RNA helicase, DEAD-box type, Q motif LJF99_17555 IPR011545 DEAD/DEAH box helicase domain LJF99_17555 IPR028622 ATP-dependent RNA helicase RhlE LJF99_17555 IPR001650 Helicase, C-terminal LJF99_17555 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_17555 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LJF99_17570 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LJF99_17570 IPR005135 Endonuclease/exonuclease/phosphatase LJF99_17570 IPR017766 Sphingomyelinase C/phospholipase C LJF99_17575 IPR000014 PAS domain LJF99_17575 IPR035965 PAS domain superfamily LJF99_17575 IPR001610 PAC motif LJF99_17575 IPR013655 PAS fold-3 LJF99_17575 IPR003660 HAMP domain LJF99_17575 IPR004090 Chemotaxis methyl-accepting receptor LJF99_17575 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_17590 IPR008249 Uncharacterised protein family UPF0231 LJF99_17595 IPR008599 Putative sugar diacid recognition LJF99_17595 IPR041522 CdaR, GGDEF-like domain LJF99_17595 IPR025736 PucR C-terminal helix-turn-helix domain LJF99_17595 IPR042070 PucR C-terminal helix-turn-helix domain superfamily LJF99_17600 IPR003474 Gluconate transporter LJF99_17600 IPR003474 Gluconate transporter LJF99_17605 IPR018193 Glycerate kinase, flavodoxin-like fold LJF99_17605 IPR004381 Glycerate kinase LJF99_17605 IPR036129 Glycerate kinase superfamily LJF99_17605 IPR018197 Glycerate kinase, restriction-enzyme-like fold LJF99_17615 IPR000889 Glutathione peroxidase LJF99_17615 IPR029759 Glutathione peroxidase active site LJF99_17615 IPR036249 Thioredoxin-like superfamily LJF99_17620 IPR005119 LysR, substrate-binding LJF99_17620 IPR000847 Transcription regulator HTH, LysR LJF99_17620 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17620 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17625 IPR008276 Concentrative nucleoside transporter LJF99_17625 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LJF99_17625 IPR002668 Concentrative nucleoside transporter N-terminal domain LJF99_17625 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LJF99_17625 IPR011657 Concentrative nucleoside transporter C-terminal domain LJF99_17630 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17630 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily LJF99_17630 IPR023546 Methylated-DNA--protein-cysteine methyltransferase LJF99_17630 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site LJF99_17630 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain LJF99_17630 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain LJF99_17630 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding LJF99_17635 IPR000352 Peptide chain release factor class I LJF99_17640 IPR002187 Nitrogen regulatory protein PII LJF99_17640 IPR011322 Nitrogen regulatory PII-like, alpha/beta LJF99_17640 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LJF99_17640 IPR017918 Nitrogen regulatory protein PII, conserved site LJF99_17640 IPR002332 Nitrogen regulatory protein P-II, urydylation site LJF99_17645 IPR026045 Ferric binding protein LJF99_17645 IPR006059 Bacterial extracellular solute-binding protein LJF99_17655 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit LJF99_17655 IPR003593 AAA+ ATPase domain LJF99_17655 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA LJF99_17655 IPR003439 ABC transporter-like LJF99_17655 IPR017871 ABC transporter, conserved site LJF99_17655 IPR008995 Molybdate/tungstate binding, C-terminal LJF99_17655 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_17655 IPR013611 Transport-associated OB, type 2 LJF99_17660 IPR011008 Dimeric alpha-beta barrel LJF99_17660 IPR006314 Dyp-type peroxidase LJF99_17665 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17665 IPR036251 Arginine repressor, C-terminal domain superfamily LJF99_17665 IPR001669 Arginine repressor LJF99_17665 IPR020899 Arginine repressor, C-terminal LJF99_17665 IPR020900 Arginine repressor, DNA-binding domain LJF99_17665 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17670 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LJF99_17670 IPR003593 AAA+ ATPase domain LJF99_17670 IPR003439 ABC transporter-like LJF99_17670 IPR017871 ABC transporter, conserved site LJF99_17670 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_17675 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_17675 IPR018313 Solute-binding protein family 3, conserved site LJF99_17675 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LJF99_17675 IPR001320 Ionotropic glutamate receptor LJF99_17680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_17680 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_17680 IPR035906 MetI-like superfamily LJF99_17685 IPR035906 MetI-like superfamily LJF99_17685 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_17685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_17690 IPR022383 Lactate/malate dehydrogenase, C-terminal LJF99_17690 IPR001236 Lactate/malate dehydrogenase, N-terminal LJF99_17690 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LJF99_17690 IPR001252 Malate dehydrogenase, active site LJF99_17690 IPR010097 Malate dehydrogenase, type 1 LJF99_17690 IPR023958 Malate dehydrogenase, type 1, bacterial LJF99_17690 IPR036291 NAD(P)-binding domain superfamily LJF99_17690 IPR001557 L-lactate/malate dehydrogenase LJF99_17695 IPR006597 Sel1-like repeat LJF99_17695 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_17700 IPR017927 FAD-binding domain, ferredoxin reductase-type LJF99_17700 IPR017938 Riboflavin synthase-like beta-barrel LJF99_17700 IPR001433 Oxidoreductase FAD/NAD(P)-binding LJF99_17700 IPR023950 Flavohemoprotein LJF99_17700 IPR012292 Globin/Protoglobin LJF99_17700 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LJF99_17700 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LJF99_17700 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LJF99_17700 IPR000971 Globin LJF99_17700 IPR009050 Globin-like superfamily LJF99_17705 IPR023761 Transcriptional repressor HTH, NsrR LJF99_17705 IPR000944 Transcription regulator Rrf2-type LJF99_17705 IPR030489 Transcription regulator Rrf2-type, conserved site LJF99_17705 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17705 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17710 IPR000644 CBS domain LJF99_17710 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_17710 IPR002550 CNNM, transmembrane domain LJF99_17710 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_17710 IPR005170 Transporter-associated domain LJF99_17715 IPR002541 Cytochrome c assembly protein LJF99_17720 IPR003593 AAA+ ATPase domain LJF99_17720 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_17720 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily LJF99_17720 IPR013822 Signal recognition particle SRP54, helical bundle LJF99_17720 IPR004125 Signal recognition particle, SRP54 subunit, M-domain LJF99_17720 IPR004780 Signal recognition particle protein LJF99_17720 IPR022941 Signal recognition particle, SRP54 subunit LJF99_17720 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LJF99_17720 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily LJF99_17725 IPR000307 Ribosomal protein S16 LJF99_17725 IPR023803 Ribosomal protein S16 domain superfamily LJF99_17730 IPR036976 RimM, N-terminal domain superfamily LJF99_17730 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_17730 IPR002676 RimM, N-terminal LJF99_17730 IPR027275 PRC-barrel domain LJF99_17730 IPR011961 16S rRNA processing protein RimM LJF99_17730 IPR011033 PRC-barrel-like superfamily LJF99_17735 IPR029028 Alpha/beta knot methyltransferases LJF99_17735 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria LJF99_17735 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal LJF99_17735 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LJF99_17735 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain LJF99_17740 IPR008991 Translation protein SH3-like domain superfamily LJF99_17740 IPR038657 Ribosomal protein L19 superfamily LJF99_17740 IPR001857 Ribosomal protein L19 LJF99_17740 IPR018257 Ribosomal protein L19, conserved site LJF99_17750 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II LJF99_17750 IPR004230 DNA mismatch repair protein MutH LJF99_17750 IPR011335 Restriction endonuclease type II-like LJF99_17750 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily LJF99_17755 IPR022927 RNA pyrophosphohydrolase RppH LJF99_17755 IPR000086 NUDIX hydrolase domain LJF99_17755 IPR020084 NUDIX hydrolase, conserved site LJF99_17755 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_17755 IPR020476 NUDIX hydrolase LJF99_17760 IPR040442 Pyruvate kinase-like domain superfamily LJF99_17760 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_17760 IPR036618 PtsI, HPr-binding domain superfamily LJF99_17760 IPR006318 Phosphotransferase system, enzyme I-like LJF99_17760 IPR036637 Phosphohistidine domain superfamily LJF99_17760 IPR023151 PEP-utilising enzyme, conserved site LJF99_17760 IPR000121 PEP-utilising enzyme, C-terminal LJF99_17760 IPR008731 Phosphotransferase system, enzyme I N-terminal LJF99_17760 IPR008279 PEP-utilising enzyme, mobile domain LJF99_17760 IPR029016 GAF-like domain superfamily LJF99_17760 IPR003018 GAF domain LJF99_17760 IPR018274 PEP-utilising enzyme, active site LJF99_17765 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt LJF99_17770 IPR020940 Thymidylate synthase, active site LJF99_17770 IPR000398 Thymidylate synthase LJF99_17770 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily LJF99_17770 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain LJF99_17775 IPR023171 Na/H antiporter domain superfamily LJF99_17775 IPR004670 Na+/H+ antiporter NhaA LJF99_17785 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17785 IPR000847 Transcription regulator HTH, LysR LJF99_17785 IPR005119 LysR, substrate-binding LJF99_17785 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17790 IPR011991 ArsR-like helix-turn-helix domain LJF99_17790 IPR001845 HTH ArsR-type DNA-binding domain LJF99_17790 IPR036390 Winged helix DNA-binding domain superfamily LJF99_17790 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_17795 IPR002583 Ribosomal protein S20 LJF99_17795 IPR036510 Ribosomal protein S20 superfamily LJF99_17800 IPR004268 Peptidoglycan biosynthesis protein MurJ LJF99_17805 IPR023465 Riboflavin kinase domain superfamily LJF99_17805 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic LJF99_17805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_17805 IPR023468 Riboflavin kinase LJF99_17805 IPR002606 Riboflavin kinase, bacterial LJF99_17805 IPR015864 FAD synthetase LJF99_17810 IPR002301 Isoleucine-tRNA ligase LJF99_17810 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain LJF99_17810 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_17810 IPR010663 Zinc finger, FPG/IleRS-type LJF99_17810 IPR002300 Aminoacyl-tRNA synthetase, class Ia LJF99_17810 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LJF99_17810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_17810 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LJF99_17810 IPR023585 Isoleucine-tRNA ligase, type 1 LJF99_17810 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LJF99_17815 IPR001872 Peptidase A8, signal peptidase II LJF99_17820 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LJF99_17825 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LJF99_17830 IPR012902 Prokaryotic N-terminal methylation site LJF99_17830 IPR031982 Type IV minor pilin ComP LJF99_17850 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LJF99_17850 IPR008707 PilC beta-propeller domain LJF99_17865 IPR000132 Nitrilase/cyanide hydratase, conserved site LJF99_17865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_17865 IPR022310 NAD/GMP synthase LJF99_17865 IPR014445 Glutamine-dependent NAD(+) synthetase LJF99_17865 IPR003694 NAD(+) synthetase LJF99_17865 IPR003010 Carbon-nitrogen hydrolase LJF99_17865 IPR036526 Carbon-nitrogen hydrolase superfamily LJF99_17870 IPR017918 Nitrogen regulatory protein PII, conserved site LJF99_17870 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LJF99_17870 IPR011322 Nitrogen regulatory PII-like, alpha/beta LJF99_17870 IPR002332 Nitrogen regulatory protein P-II, urydylation site LJF99_17870 IPR002187 Nitrogen regulatory protein PII LJF99_17880 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily LJF99_17880 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LJF99_17880 IPR003815 S-ribosylhomocysteinase (LuxS) LJF99_17885 IPR029787 Nucleotide cyclase LJF99_17885 IPR000160 GGDEF domain LJF99_17890 IPR011805 Ribonuclease R LJF99_17890 IPR003029 S1 domain LJF99_17890 IPR022967 RNA-binding domain, S1 LJF99_17890 IPR013668 Ribonuclease R winged-helix domain LJF99_17890 IPR004476 Ribonuclease II/ribonuclease R LJF99_17890 IPR011129 Cold shock domain LJF99_17890 IPR001900 Ribonuclease II/R LJF99_17890 IPR013223 Ribonuclease B, N-terminal OB domain LJF99_17890 IPR012340 Nucleic acid-binding, OB-fold LJF99_17890 IPR040476 RNase II/RNase R, cold shock domain LJF99_17890 IPR022966 Ribonuclease II/R, conserved site LJF99_17895 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LJF99_17895 IPR013123 RNA 2-O ribose methyltransferase, substrate binding LJF99_17895 IPR001537 tRNA/rRNA methyltransferase, SpoU type LJF99_17895 IPR029028 Alpha/beta knot methyltransferases LJF99_17895 IPR029064 50S ribosomal protein L30e-like LJF99_17895 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB LJF99_17895 IPR004441 RNA methyltransferase TrmH family LJF99_17905 IPR016181 Acyl-CoA N-acyltransferase LJF99_17905 IPR000182 GNAT domain LJF99_17925 IPR001046 NRAMP family LJF99_17930 IPR000529 Ribosomal protein S6 LJF99_17930 IPR020814 Ribosomal protein S6, plastid/chloroplast LJF99_17930 IPR035980 Ribosomal protein S6 superfamily LJF99_17930 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LJF99_17935 IPR036870 Ribosomal protein S18 superfamily LJF99_17935 IPR018275 Ribosomal protein S18, conserved site LJF99_17935 IPR001648 Ribosomal protein S18 LJF99_17940 IPR020070 Ribosomal protein L9, N-terminal LJF99_17940 IPR036791 Ribosomal protein L9, C-terminal domain superfamily LJF99_17940 IPR020069 Ribosomal protein L9, C-terminal LJF99_17940 IPR020594 Ribosomal protein L9, bacteria/chloroplast LJF99_17940 IPR036935 Ribosomal protein L9, N-terminal domain superfamily LJF99_17940 IPR000244 Ribosomal protein L9 LJF99_17940 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LJF99_17945 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LJF99_17945 IPR017927 FAD-binding domain, ferredoxin reductase-type LJF99_17945 IPR033892 Ferredoxin--NADP reductase, bacteria LJF99_17945 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LJF99_17945 IPR001433 Oxidoreductase FAD/NAD(P)-binding LJF99_17945 IPR017938 Riboflavin synthase-like beta-barrel LJF99_17970 IPR020843 Polyketide synthase, enoylreductase domain LJF99_17970 IPR036291 NAD(P)-binding domain superfamily LJF99_17970 IPR011032 GroES-like superfamily LJF99_17970 IPR013154 Alcohol dehydrogenase, N-terminal LJF99_17970 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LJF99_17970 IPR013149 Alcohol dehydrogenase, C-terminal LJF99_17975 IPR032816 SNARE associated Golgi protein LJF99_17980 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LJF99_17980 IPR011765 Peptidase M16, N-terminal LJF99_17980 IPR001431 Peptidase M16, zinc-binding site LJF99_17980 IPR007863 Peptidase M16, C-terminal LJF99_17985 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LJF99_17985 IPR007370 Glutamate--cysteine ligase LJF99_17985 IPR006334 Glutamate--cysteine ligase, monofunctional LJF99_17995 IPR020845 AMP-binding, conserved site LJF99_17995 IPR000873 AMP-dependent synthetase/ligase LJF99_17995 IPR042099 AMP-dependent synthetase-like superfamily LJF99_18005 IPR000182 GNAT domain LJF99_18005 IPR017813 Mycothiol acetyltransferase LJF99_18005 IPR016181 Acyl-CoA N-acyltransferase LJF99_18015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18015 IPR022547 ATPase, RavA, C-terminal LJF99_18015 IPR023671 ATPase RavA LJF99_18015 IPR011704 ATPase, dynein-related, AAA domain LJF99_18015 IPR003593 AAA+ ATPase domain LJF99_18015 IPR041538 ATPase RavA-like, AAA lid domain LJF99_18020 IPR002035 von Willebrand factor, type A LJF99_18020 IPR036465 von Willebrand factor A-like domain superfamily LJF99_18020 IPR008912 Uncharacterised protein family CoxE-like LJF99_18020 IPR023481 Uncharacterised protein family ViaA LJF99_18030 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_18030 IPR000485 AsnC-type HTH domain LJF99_18030 IPR011008 Dimeric alpha-beta barrel LJF99_18030 IPR019888 Transcription regulator AsnC-type LJF99_18030 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LJF99_18030 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LJF99_18030 IPR036390 Winged helix DNA-binding domain superfamily LJF99_18030 IPR011991 ArsR-like helix-turn-helix domain LJF99_18040 IPR011006 CheY-like superfamily LJF99_18040 IPR000160 GGDEF domain LJF99_18040 IPR029787 Nucleotide cyclase LJF99_18040 IPR001789 Signal transduction response regulator, receiver domain LJF99_18045 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily LJF99_18045 IPR032090 Peptide chain release factor 3, C-terminal LJF99_18045 IPR004548 Peptide chain release factor 3 LJF99_18045 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18045 IPR031157 Tr-type G domain, conserved site LJF99_18045 IPR000795 Transcription factor, GTP-binding domain LJF99_18045 IPR041732 Peptide chain release factor 3, GTP-binding domain LJF99_18045 IPR035647 EF-G domain III/V-like LJF99_18045 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_18045 IPR004161 Translation elongation factor EFTu-like, domain 2 LJF99_18045 IPR005225 Small GTP-binding protein domain LJF99_18055 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LJF99_18055 IPR013785 Aldolase-type TIM barrel LJF99_18065 IPR002316 Proline-tRNA ligase, class IIa LJF99_18065 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily LJF99_18065 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LJF99_18065 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_18065 IPR004154 Anticodon-binding LJF99_18065 IPR036621 Anticodon-binding domain superfamily LJF99_18065 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain LJF99_18065 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type LJF99_18065 IPR033730 Prokaryote proline-tRNA ligase core domain LJF99_18065 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 LJF99_18070 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_18070 IPR003660 HAMP domain LJF99_18075 IPR010994 RuvA domain 2-like LJF99_18075 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial LJF99_18075 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LJF99_18075 IPR036267 RuvA, C-terminal domain superfamily LJF99_18075 IPR011114 Holliday junction DNA helicase RuvA, C-terminal LJF99_18075 IPR012340 Nucleic acid-binding, OB-fold LJF99_18075 IPR000085 Bacterial DNA recombination protein RuvA LJF99_18080 IPR003593 AAA+ ATPase domain LJF99_18080 IPR041445 RuvB, AAA lid domain LJF99_18080 IPR004605 DNA helicase, Holliday junction RuvB-type LJF99_18080 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18080 IPR008824 RuvB-like P-loop domain LJF99_18080 IPR008823 RuvB C-terminal winged helix domain LJF99_18080 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_18080 IPR036390 Winged helix DNA-binding domain superfamily LJF99_18085 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LJF99_18090 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LJF99_18095 IPR011724 Cyd operon protein YbgT LJF99_18095 IPR012994 Membrane bound YbgT-like LJF99_18100 IPR011846 Cyd operon protein YbgE LJF99_18105 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site LJF99_18105 IPR006683 Thioesterase domain LJF99_18105 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family LJF99_18105 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase LJF99_18105 IPR029069 HotDog domain superfamily LJF99_18110 IPR014163 Tol-Pal system, TolQ LJF99_18110 IPR002898 MotA/TolQ/ExbB proton channel LJF99_18115 IPR003400 Biopolymer transport protein ExbD/TolR LJF99_18115 IPR014168 Tol-Pal system protein TolR LJF99_18125 IPR011042 Six-bladed beta-propeller, TolB-like LJF99_18125 IPR007195 TolB, N-terminal LJF99_18125 IPR011659 WD40-like Beta Propeller LJF99_18125 IPR014167 Tol-Pal system protein TolB LJF99_18125 IPR036752 TolB, N-terminal domain superfamily LJF99_18130 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal LJF99_18130 IPR039001 Peptidoglycan-associated lipoprotein LJF99_18130 IPR036737 OmpA-like domain superfamily LJF99_18130 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_18130 IPR006665 OmpA-like domain LJF99_18130 IPR006664 Outer membrane protein, bacterial LJF99_18135 IPR034706 Cell division coordinator CpoB LJF99_18135 IPR032519 YbgF, trimerisation domain LJF99_18135 IPR019734 Tetratricopeptide repeat LJF99_18135 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_18135 IPR013026 Tetratricopeptide repeat-containing domain LJF99_18135 IPR014162 Cell division coordinator CpoB, C-terminal LJF99_18215 IPR036094 Quinolinate synthetase A superfamily LJF99_18215 IPR023513 Quinolinate synthase A, type 1 LJF99_18215 IPR003473 Quinolinate synthetase A LJF99_18220 IPR014718 Glycoside hydrolase-type carbohydrate-binding LJF99_18220 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase LJF99_18220 IPR025532 Glucose-6-phosphate 1-epimerase LJF99_18220 IPR011013 Galactose mutarotase-like domain superfamily LJF99_18225 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LJF99_18225 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LJF99_18225 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I LJF99_18225 IPR036291 NAD(P)-binding domain superfamily LJF99_18225 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LJF99_18225 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site LJF99_18230 IPR003385 Glycoside hydrolase, family 77 LJF99_18230 IPR017853 Glycoside hydrolase superfamily LJF99_18235 IPR014756 Immunoglobulin E-set LJF99_18235 IPR013783 Immunoglobulin-like fold LJF99_18235 IPR017853 Glycoside hydrolase superfamily LJF99_18235 IPR013780 Glycosyl hydrolase, all-beta LJF99_18235 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB LJF99_18235 IPR037439 1,4-alpha-glucan-branching enzyme LJF99_18235 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta LJF99_18235 IPR004193 Glycoside hydrolase, family 13, N-terminal LJF99_18235 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_18240 IPR014756 Immunoglobulin E-set LJF99_18240 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_18240 IPR013780 Glycosyl hydrolase, all-beta LJF99_18240 IPR011837 Glycogen debranching enzyme, GlgX type LJF99_18240 IPR017853 Glycoside hydrolase superfamily LJF99_18240 IPR013783 Immunoglobulin-like fold LJF99_18240 IPR004193 Glycoside hydrolase, family 13, N-terminal LJF99_18245 IPR011057 Mss4-like superfamily LJF99_18245 IPR028427 Peptide methionine sulfoxide reductase LJF99_18245 IPR002579 Peptide methionine sulphoxide reductase MrsB LJF99_18255 IPR018490 Cyclic nucleotide-binding-like LJF99_18255 IPR018488 Cyclic nucleotide-binding, conserved site LJF99_18255 IPR000595 Cyclic nucleotide-binding domain LJF99_18255 IPR013099 Potassium channel domain LJF99_18255 IPR027378 Cyclic nucleotide-regulated ion channel, N-terminal LJF99_18255 IPR014710 RmlC-like jelly roll fold LJF99_18260 IPR003646 SH3-like domain, bacterial-type LJF99_18260 IPR016476 SH3 domain protein LJF99_18265 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_18265 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_18265 IPR016160 Aldehyde dehydrogenase, cysteine active site LJF99_18265 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LJF99_18265 IPR015590 Aldehyde dehydrogenase domain LJF99_18265 IPR013321 Arc-type ribbon-helix-helix LJF99_18265 IPR025703 Bifunctional protein PutA LJF99_18265 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 LJF99_18265 IPR029041 FAD-linked oxidoreductase-like LJF99_18265 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain LJF99_18265 IPR024090 Proline dehydrogenase PutA, domain I LJF99_18265 IPR024089 Proline dehydrogenase PutA, domain I/II LJF99_18265 IPR024082 Proline dehydrogenase PutA, domain II LJF99_18265 IPR002872 Proline dehydrogenase domain LJF99_18265 IPR010985 Ribbon-helix-helix LJF99_18265 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_18270 IPR000086 NUDIX hydrolase domain LJF99_18270 IPR022925 NADH pyrophosphatase NudC LJF99_18270 IPR015376 Zinc ribbon, NADH pyrophosphatase LJF99_18270 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_18270 IPR020084 NUDIX hydrolase, conserved site LJF99_18275 IPR038071 UROD/MetE-like superfamily LJF99_18275 IPR000257 Uroporphyrinogen decarboxylase (URO-D) LJF99_18275 IPR006361 Uroporphyrinogen decarboxylase HemE LJF99_18280 IPR008162 Inorganic pyrophosphatase LJF99_18280 IPR036649 Inorganic pyrophosphatase superfamily LJF99_18285 IPR000713 Mur ligase, N-terminal catalytic domain LJF99_18285 IPR013221 Mur ligase, central LJF99_18285 IPR036565 Mur-like, catalytic domain superfamily LJF99_18285 IPR004101 Mur ligase, C-terminal LJF99_18285 IPR005757 Murein peptide ligase LJF99_18285 IPR036615 Mur ligase, C-terminal domain superfamily LJF99_18290 IPR036551 Flavin prenyltransferase-like LJF99_18290 IPR003382 Flavoprotein LJF99_18290 IPR004507 Flavin prenyltransferase UbiX-like LJF99_18295 IPR009057 Homeobox-like domain superfamily LJF99_18295 IPR001647 DNA-binding HTH domain, TetR-type LJF99_18295 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LJF99_18300 IPR005904 Hypoxanthine phosphoribosyl transferase LJF99_18300 IPR029057 Phosphoribosyltransferase-like LJF99_18300 IPR000836 Phosphoribosyltransferase domain LJF99_18305 IPR003593 AAA+ ATPase domain LJF99_18305 IPR003439 ABC transporter-like LJF99_18305 IPR017871 ABC transporter, conserved site LJF99_18305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18310 IPR013525 ABC-2 type transporter LJF99_18310 IPR000412 ABC-2 transporter LJF99_18320 IPR003721 Pantoate-beta-alanine ligase LJF99_18320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_18320 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain LJF99_18320 IPR004821 Cytidyltransferase-like domain LJF99_18325 IPR040442 Pyruvate kinase-like domain superfamily LJF99_18325 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_18325 IPR003700 Ketopantoate hydroxymethyltransferase LJF99_18330 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily LJF99_18330 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK LJF99_18335 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LJF99_18335 IPR025866 Polymerase A arginine-rich C-terminal domain LJF99_18335 IPR002646 Poly A polymerase, head domain LJF99_18335 IPR010206 Poly(A) polymerase I LJF99_18340 IPR022380 Glutamyl-Q tRNA(Asp) synthetase LJF99_18340 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LJF99_18340 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LJF99_18340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_18345 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LJF99_18345 IPR000962 Zinc finger, DksA/TraR C4-type LJF99_18345 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LJF99_18345 IPR037187 DksA, N-terminal domain superfamily LJF99_18345 IPR012784 RNA polymerase-binding transcription factor DksA LJF99_18350 IPR040452 Sugar fermentation stimulation protein, C-terminal LJF99_18350 IPR005224 Sugar fermentation stimulation protein LJF99_18350 IPR041465 SfsA, N-terminal OB domain LJF99_18360 IPR010225 ATP-dependent helicase HrpB LJF99_18360 IPR011545 DEAD/DEAH box helicase domain LJF99_18360 IPR007502 Helicase-associated domain LJF99_18360 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_18360 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal LJF99_18360 IPR001650 Helicase, C-terminal LJF99_18360 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18365 IPR036950 Penicillin binding protein transglycosylase domain LJF99_18365 IPR001460 Penicillin-binding protein, transpeptidase LJF99_18365 IPR028166 Bifunctional transglycosylase second domain LJF99_18365 IPR023346 Lysozyme-like domain superfamily LJF99_18365 IPR012338 Beta-lactamase/transpeptidase-like LJF99_18365 IPR011813 Penicillin-binding protein 1B LJF99_18365 IPR001264 Glycosyl transferase, family 51 LJF99_18370 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LJF99_18370 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LJF99_18370 IPR037523 Vicinal oxygen chelate (VOC) domain LJF99_18370 IPR037478 YwkD-like domain LJF99_18375 IPR000390 Small multidrug resistance protein family LJF99_18375 IPR023737 Spermidine export protein MdtI LJF99_18380 IPR000390 Small multidrug resistance protein family LJF99_18380 IPR023740 Spermidine export protein MdtJ LJF99_18385 IPR000847 Transcription regulator HTH, LysR LJF99_18385 IPR036390 Winged helix DNA-binding domain superfamily LJF99_18385 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_18385 IPR005119 LysR, substrate-binding LJF99_18390 IPR037522 HD-GYP domain LJF99_18390 IPR001789 Signal transduction response regulator, receiver domain LJF99_18390 IPR011006 CheY-like superfamily LJF99_18390 IPR003607 HD/PDEase domain LJF99_18390 IPR021800 Domain of unknown function DUF3369 LJF99_18400 IPR032908 Lipid A 1-diphosphate synthase LJF99_18400 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LJF99_18400 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LJF99_18415 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_18415 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase LJF99_18415 IPR005814 Aminotransferase class-III LJF99_18415 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_18415 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_18420 IPR001807 Chloride channel, voltage gated LJF99_18420 IPR023861 Chloride channel, ClcA LJF99_18420 IPR014743 Chloride channel, core LJF99_18430 IPR035903 HesB-like domain superfamily LJF99_18430 IPR023063 FeS cluster insertion protein ErpA LJF99_18430 IPR000361 FeS cluster biogenesis LJF99_18430 IPR016092 FeS cluster insertion protein LJF99_18430 IPR017870 FeS cluster insertion, C-terminal, conserved site LJF99_18460 IPR001123 Amino acid exporter protein, LeuE-type LJF99_18465 IPR009057 Homeobox-like domain superfamily LJF99_18465 IPR005412 DNA-binding protein Fis LJF99_18465 IPR002197 DNA binding HTH domain, Fis-type LJF99_18470 IPR018517 tRNA-dihydrouridine synthase, conserved site LJF99_18470 IPR001269 tRNA-dihydrouridine synthase LJF99_18470 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal LJF99_18470 IPR032887 tRNA-dihydrouridine synthase B LJF99_18470 IPR035587 DUS-like, FMN-binding domain LJF99_18470 IPR013785 Aldolase-type TIM barrel LJF99_18470 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 LJF99_18475 IPR003423 Outer membrane efflux protein LJF99_18475 IPR010130 Type I secretion outer membrane protein, TolC LJF99_18480 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_18510 IPR011006 CheY-like superfamily LJF99_18510 IPR039420 Transcriptional regulatory protein WalR-like LJF99_18510 IPR001789 Signal transduction response regulator, receiver domain LJF99_18510 IPR036457 PPM-type phosphatase domain superfamily LJF99_18510 IPR028616 Regulator of RpoS LJF99_18515 IPR000109 Proton-dependent oligopeptide transporter family LJF99_18515 IPR036259 MFS transporter superfamily LJF99_18515 IPR020846 Major facilitator superfamily domain LJF99_18515 IPR005279 Dipeptide/tripeptide permease LJF99_18515 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site LJF99_18520 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_18520 IPR005835 Nucleotidyl transferase domain LJF99_18520 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type LJF99_18525 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LJF99_18525 IPR010994 RuvA domain 2-like LJF99_18530 IPR020583 Inositol monophosphatase, metal-binding site LJF99_18530 IPR000760 Inositol monophosphatase-like LJF99_18530 IPR020550 Inositol monophosphatase, conserved site LJF99_18530 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ LJF99_18535 IPR005545 YCII-related LJF99_18535 IPR011008 Dimeric alpha-beta barrel LJF99_18540 IPR006008 Intracellular septation protein A LJF99_18545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_18545 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_18545 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent LJF99_18545 IPR002129 Pyridoxal phosphate-dependent decarboxylase LJF99_18550 IPR004254 AdipoR/Haemolysin-III-related LJF99_18550 IPR005744 Hly-III LJF99_18555 IPR023018 Transport protein YidE, putative LJF99_18555 IPR006037 Regulator of K+ conductance, C-terminal LJF99_18555 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_18555 IPR006512 YidE/YbjL duplication LJF99_18570 IPR024181 Chemotaxis response regulator CheV LJF99_18570 IPR036061 CheW-like domain superfamily LJF99_18570 IPR011006 CheY-like superfamily LJF99_18570 IPR002545 CheW-like domain LJF99_18570 IPR001789 Signal transduction response regulator, receiver domain LJF99_18575 IPR008265 Lipase, GDSL, active site LJF99_18575 IPR013830 SGNH hydrolase-type esterase domain LJF99_18575 IPR036514 SGNH hydrolase superfamily LJF99_18580 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18580 IPR017871 ABC transporter, conserved site LJF99_18580 IPR003439 ABC transporter-like LJF99_18580 IPR003593 AAA+ ATPase domain LJF99_18585 IPR038766 Membrane component of ABC transporter, predicted LJF99_18590 IPR013549 Domain of unknown function DUF1731 LJF99_18590 IPR010099 Epimerase family protein SDR39U1 LJF99_18590 IPR036291 NAD(P)-binding domain superfamily LJF99_18590 IPR001509 NAD-dependent epimerase/dehydratase LJF99_18595 IPR001633 EAL domain LJF99_18595 IPR035919 EAL domain superfamily LJF99_18595 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LJF99_18610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_18610 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type LJF99_18615 IPR007416 Protein of unknown function DUF469 LJF99_18620 IPR012338 Beta-lactamase/transpeptidase-like LJF99_18620 IPR015868 Glutaminase LJF99_18625 IPR001763 Rhodanese-like domain LJF99_18625 IPR036873 Rhodanese-like domain superfamily LJF99_18625 IPR001307 Thiosulphate sulfurtransferase, conserved site LJF99_18630 IPR010305 Protein of unknown function DUF903 LJF99_18630 IPR010920 LSM domain superfamily LJF99_18635 IPR011917 ABC transporter, lipid A export, MsbA LJF99_18635 IPR017871 ABC transporter, conserved site LJF99_18635 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18635 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_18635 IPR011527 ABC transporter type 1, transmembrane domain LJF99_18635 IPR003439 ABC transporter-like LJF99_18635 IPR003593 AAA+ ATPase domain LJF99_18640 IPR002410 Peptidase S33 LJF99_18640 IPR000073 Alpha/beta hydrolase fold-1 LJF99_18640 IPR029058 Alpha/Beta hydrolase fold LJF99_18645 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_18645 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_18645 IPR016160 Aldehyde dehydrogenase, cysteine active site LJF99_18645 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LJF99_18645 IPR015590 Aldehyde dehydrogenase domain LJF99_18645 IPR011264 Betaine aldehyde dehydrogenase LJF99_18645 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_18650 IPR011533 Oxygen-dependent choline dehydrogenase LJF99_18650 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_18650 IPR027424 Glucose Oxidase, domain 2 LJF99_18650 IPR012132 Glucose-methanol-choline oxidoreductase LJF99_18650 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal LJF99_18650 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal LJF99_18655 IPR027424 Glucose Oxidase, domain 2 LJF99_18655 IPR012132 Glucose-methanol-choline oxidoreductase LJF99_18655 IPR011533 Oxygen-dependent choline dehydrogenase LJF99_18655 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal LJF99_18655 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_18655 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal LJF99_18680 IPR013783 Immunoglobulin-like fold LJF99_18680 IPR035986 PKD domain superfamily LJF99_18680 IPR000601 PKD domain LJF99_18680 IPR022409 PKD/Chitinase domain LJF99_18680 IPR012300 Peptidase M6, InhA LJF99_18680 IPR008757 Peptidase M6-like, domain LJF99_18685 IPR009671 Regulator of ribonuclease activity B domain LJF99_18685 IPR036701 RraB-like superfamily LJF99_18685 IPR016716 Regulator of ribonuclease activity B LJF99_18690 IPR029787 Nucleotide cyclase LJF99_18690 IPR005330 MHYT domain LJF99_18690 IPR000160 GGDEF domain LJF99_18690 IPR035919 EAL domain superfamily LJF99_18690 IPR001633 EAL domain LJF99_18690 IPR035965 PAS domain superfamily LJF99_18710 IPR018668 DNA-binding protein VF530-like LJF99_18710 IPR036361 SAP domain superfamily LJF99_18715 IPR003817 Phosphatidylserine decarboxylase-related LJF99_18715 IPR033177 Phosphatidylserine decarboxylase LJF99_18715 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 LJF99_18720 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LJF99_18720 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18720 IPR004881 Ribosome biogenesis GTPase RsgA LJF99_18720 IPR010914 RsgA GTPase domain LJF99_18725 IPR012337 Ribonuclease H-like superfamily LJF99_18725 IPR036397 Ribonuclease H superfamily LJF99_18725 IPR022894 Oligoribonuclease LJF99_18725 IPR013520 Exonuclease, RNase T/DNA polymerase III LJF99_18755 IPR012156 Cold shock, CspA LJF99_18755 IPR011129 Cold shock domain LJF99_18755 IPR019844 Cold-shock (CSD) domain LJF99_18755 IPR002059 Cold-shock protein, DNA-binding LJF99_18755 IPR012340 Nucleic acid-binding, OB-fold LJF99_18765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_18765 IPR003660 HAMP domain LJF99_18770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_18770 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LJF99_18770 IPR033910 Glutamyl-tRNA synthetase LJF99_18770 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial LJF99_18770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_18770 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 LJF99_18770 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding LJF99_18770 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LJF99_18800 IPR003610 Carbohydrate-binding module family 5/12 LJF99_18800 IPR036573 Carbohydrate-binding module superfamily 5/12 LJF99_18800 IPR009470 Chitinase, C-terminal LJF99_18800 IPR011583 Chitinase II LJF99_18800 IPR029070 Chitinase insertion domain superfamily LJF99_18800 IPR001223 Glycoside hydrolase family 18, catalytic domain LJF99_18800 IPR017853 Glycoside hydrolase superfamily LJF99_18800 IPR013783 Immunoglobulin-like fold LJF99_18815 IPR003400 Biopolymer transport protein ExbD/TolR LJF99_18820 IPR002898 MotA/TolQ/ExbB proton channel LJF99_18825 IPR002898 MotA/TolQ/ExbB proton channel LJF99_18835 IPR012910 TonB-dependent receptor, plug domain LJF99_18835 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_18835 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_18835 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_18835 IPR039426 Vitamin B12 transporter BtuB-like LJF99_18835 IPR010101 TonB-dependent vitamin B12 transporter BtuB LJF99_18835 IPR010916 TonB box, conserved site LJF99_18840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_18840 IPR035906 MetI-like superfamily LJF99_18845 IPR035906 MetI-like superfamily LJF99_18845 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_18850 IPR035906 MetI-like superfamily LJF99_18850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_18850 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LJF99_18855 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_18855 IPR039424 Solute-binding protein family 5 LJF99_18855 IPR023765 Solute-binding protein family 5, conserved site LJF99_18855 IPR000914 Solute-binding protein family 5 domain LJF99_18860 IPR017871 ABC transporter, conserved site LJF99_18860 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LJF99_18860 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18860 IPR003439 ABC transporter-like LJF99_18860 IPR003593 AAA+ ATPase domain LJF99_18865 IPR003593 AAA+ ATPase domain LJF99_18865 IPR003439 ABC transporter-like LJF99_18865 IPR017871 ABC transporter, conserved site LJF99_18865 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LJF99_18865 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_18870 IPR002933 Peptidase M20 LJF99_18870 IPR011650 Peptidase M20, dimerisation domain LJF99_18870 IPR001160 Peptidase M20C, Xaa-His dipeptidase LJF99_18880 IPR023747 Xanthine-guanine phosphoribosyltransferase LJF99_18880 IPR029057 Phosphoribosyltransferase-like LJF99_18880 IPR000836 Phosphoribosyltransferase domain LJF99_18885 IPR010520 UPF0255 family LJF99_18885 IPR029058 Alpha/Beta hydrolase fold LJF99_18890 IPR038208 Sigma factor-binding protein Crl superfamily LJF99_18890 IPR009986 Sigma factor-binding transcriptional regulator Crl LJF99_18895 IPR001048 Aspartate/glutamate/uridylate kinase LJF99_18895 IPR036974 PUA domain superfamily LJF99_18895 IPR015947 PUA-like superfamily LJF99_18895 IPR002478 PUA domain LJF99_18895 IPR019797 Glutamate 5-kinase, conserved site LJF99_18895 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase LJF99_18895 IPR011529 Glutamate 5-kinase LJF99_18895 IPR001057 Glutamate/acetylglutamate kinase LJF99_18895 IPR036393 Acetylglutamate kinase-like superfamily LJF99_18895 IPR041739 Glutamate-5-kinase domain LJF99_18900 IPR015590 Aldehyde dehydrogenase domain LJF99_18900 IPR000965 GPR domain LJF99_18900 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_18900 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_18900 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site LJF99_18900 IPR012134 Glutamate-5-semialdehyde dehydrogenase LJF99_18900 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_18910 IPR006016 UspA LJF99_18910 IPR006015 Universal stress protein A family LJF99_18910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_18930 IPR036390 Winged helix DNA-binding domain superfamily LJF99_18930 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_18930 IPR029056 Ribokinase-like LJF99_18930 IPR011611 Carbohydrate kinase PfkB LJF99_18930 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LJF99_18935 IPR022830 Indigoidine synthase A-like LJF99_18935 IPR007342 Pseudouridine-5'-phosphate glycosidase LJF99_18940 IPR041891 Carbonic anhydrase, prokaryotic-like LJF99_18940 IPR001148 Alpha carbonic anhydrase domain LJF99_18940 IPR036398 Alpha carbonic anhydrase domain superfamily LJF99_18940 IPR018338 Carbonic anhydrase, alpha-class, conserved site LJF99_18940 IPR023561 Carbonic anhydrase, alpha-class LJF99_18945 IPR009056 Cytochrome c-like domain LJF99_18945 IPR036909 Cytochrome c-like domain superfamily LJF99_18945 IPR004852 Di-haem cytochrome c peroxidase LJF99_18945 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase LJF99_18980 IPR009081 Phosphopantetheine binding ACP domain LJF99_18980 IPR036736 ACP-like superfamily LJF99_18980 IPR003231 Acyl carrier protein (ACP) LJF99_18980 IPR006162 Phosphopantetheine attachment site LJF99_18985 IPR003231 Acyl carrier protein (ACP) LJF99_18985 IPR036736 ACP-like superfamily LJF99_18985 IPR009081 Phosphopantetheine binding ACP domain LJF99_18995 IPR012743 4-coumarate--CoA ligase LJF99_18995 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_18995 IPR020845 AMP-binding, conserved site LJF99_18995 IPR042099 AMP-dependent synthetase-like superfamily LJF99_18995 IPR000873 AMP-dependent synthetase/ligase LJF99_19000 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ LJF99_19000 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ LJF99_19000 IPR029069 HotDog domain superfamily LJF99_19010 IPR005921 Histidine ammonia-lyase LJF99_19010 IPR024083 Fumarase/histidase, N-terminal LJF99_19010 IPR001106 Aromatic amino acid lyase LJF99_19010 IPR022313 Phenylalanine/histidine ammonia-lyases, active site LJF99_19010 IPR008948 L-Aspartase-like LJF99_19035 IPR016039 Thiolase-like LJF99_19035 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LJF99_19035 IPR014030 Beta-ketoacyl synthase, N-terminal LJF99_19035 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 LJF99_19035 IPR000794 Beta-ketoacyl synthase LJF99_19035 IPR018201 Beta-ketoacyl synthase, active site LJF99_19035 IPR014031 Beta-ketoacyl synthase, C-terminal LJF99_19045 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_19045 IPR036291 NAD(P)-binding domain superfamily LJF99_19045 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative LJF99_19050 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LJF99_19050 IPR014031 Beta-ketoacyl synthase, C-terminal LJF99_19050 IPR018201 Beta-ketoacyl synthase, active site LJF99_19050 IPR000794 Beta-ketoacyl synthase LJF99_19050 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 LJF99_19050 IPR014030 Beta-ketoacyl synthase, N-terminal LJF99_19050 IPR016039 Thiolase-like LJF99_19060 IPR036425 MoaB/Mog-like domain superfamily LJF99_19060 IPR001453 MoaB/Mog domain LJF99_19060 IPR008284 Molybdenum cofactor biosynthesis, conserved site LJF99_19070 IPR010619 Putative threonine/serine exporter LJF99_19075 IPR024528 Threonine/Serine exporter, ThrE LJF99_19075 IPR020914 Uncharacterised protein family UPF0442 LJF99_19080 IPR012259 Dihydrofolate reductase LJF99_19080 IPR024072 Dihydrofolate reductase-like domain superfamily LJF99_19080 IPR017925 Dihydrofolate reductase conserved site LJF99_19080 IPR001796 Dihydrofolate reductase domain LJF99_19085 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_19085 IPR005892 Glycine betaine transport ATP-binding subunit LJF99_19085 IPR003593 AAA+ ATPase domain LJF99_19085 IPR003439 ABC transporter-like LJF99_19085 IPR000644 CBS domain LJF99_19085 IPR017871 ABC transporter, conserved site LJF99_19090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_19090 IPR035906 MetI-like superfamily LJF99_19095 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain LJF99_19100 IPR002500 Phosphoadenosine phosphosulphate reductase LJF99_19100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_19100 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase LJF99_19100 IPR011800 Phosphoadenosine phosphosulphate reductase CysH LJF99_19115 IPR003719 Phenazine biosynthesis PhzF protein LJF99_19120 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LJF99_19120 IPR012340 Nucleic acid-binding, OB-fold LJF99_19120 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal LJF99_19120 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II LJF99_19120 IPR002313 Lysine-tRNA ligase, class II LJF99_19120 IPR006195 Aminoacyl-tRNA synthetase, class II LJF99_19120 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LJF99_19130 IPR033479 Double Cache domain 1 LJF99_19130 IPR004090 Chemotaxis methyl-accepting receptor LJF99_19130 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_19130 IPR029151 Periplasmic sensor-like domain superfamily LJF99_19130 IPR000727 Target SNARE coiled-coil homology domain LJF99_19130 IPR003660 HAMP domain LJF99_19135 IPR004445 Sodium/glutamate symport carrier protein GltS LJF99_19140 IPR041725 Type I (cytosolic) L-asparaginase LJF99_19140 IPR037152 L-asparaginase, N-terminal domain superfamily LJF99_19140 IPR027474 L-asparaginase, N-terminal LJF99_19140 IPR027473 L-asparaginase, C-terminal LJF99_19140 IPR006034 Asparaginase/glutaminase-like LJF99_19140 IPR027475 Asparaginase/glutaminase, active site 2 LJF99_19140 IPR020827 Asparaginase/glutaminase, active site 1 LJF99_19140 IPR036152 Asparaginase/glutaminase-like superfamily LJF99_19140 IPR040919 Asparaginase/glutaminase, C-terminal LJF99_19140 IPR006033 Type I L-asparaginase family LJF99_19145 IPR009749 Protein of unknown function DUF1315 LJF99_19150 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LJF99_19150 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site LJF99_19150 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LJF99_19150 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LJF99_19150 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I LJF99_19150 IPR036291 NAD(P)-binding domain superfamily LJF99_19165 IPR002142 Peptidase S49 LJF99_19165 IPR033854 Signal peptide peptidase A LJF99_19165 IPR004635 Peptidase S49, SppA LJF99_19165 IPR029045 ClpP/crotonase-like domain superfamily LJF99_19165 IPR004634 Peptidase S49, protease IV LJF99_19170 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_19170 IPR023753 FAD/NAD(P)-binding domain LJF99_19170 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LJF99_19170 IPR013785 Aldolase-type TIM barrel LJF99_19175 IPR029479 Nitroreductase LJF99_19175 IPR000415 Nitroreductase-like LJF99_19175 IPR026021 Putative NAD(P)H nitroreductase YdjA-like LJF99_19195 IPR001451 Hexapeptide repeat LJF99_19195 IPR018357 Hexapeptide transferase, conserved site LJF99_19195 IPR024688 Maltose/galactoside acetyltransferase LJF99_19195 IPR011004 Trimeric LpxA-like superfamily LJF99_19200 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LJF99_19200 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LJF99_19200 IPR006236 D-3-phosphoglycerate dehydrogenase LJF99_19200 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_19200 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LJF99_19200 IPR002912 ACT domain LJF99_19200 IPR036291 NAD(P)-binding domain superfamily LJF99_19200 IPR029009 Allosteric substrate binding domain superfamily LJF99_19205 IPR009246 Ethanolamine ammonia-lyase light chain LJF99_19205 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal LJF99_19205 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal LJF99_19210 IPR013785 Aldolase-type TIM barrel LJF99_19210 IPR010628 Ethanolamine ammonia lyase large subunit LJF99_19220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_19220 IPR004498 Ribosomal protein L11 methyltransferase LJF99_19225 IPR013149 Alcohol dehydrogenase, C-terminal LJF99_19225 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 LJF99_19225 IPR011032 GroES-like superfamily LJF99_19225 IPR036291 NAD(P)-binding domain superfamily LJF99_19225 IPR020843 Polyketide synthase, enoylreductase domain LJF99_19225 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site LJF99_19225 IPR013154 Alcohol dehydrogenase, N-terminal LJF99_19230 IPR036390 Winged helix DNA-binding domain superfamily LJF99_19230 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_19230 IPR005119 LysR, substrate-binding LJF99_19230 IPR000847 Transcription regulator HTH, LysR LJF99_19235 IPR011055 Duplicated hybrid motif LJF99_19235 IPR036878 Glucose permease domain IIB LJF99_19235 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LJF99_19235 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LJF99_19235 IPR003352 Phosphotransferase system, EIIC LJF99_19235 IPR013013 Phosphotransferase system, EIIC component, type 1 LJF99_19235 IPR001996 Phosphotransferase system, IIB component, type 1 LJF99_19235 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component LJF99_19240 IPR018212 Sodium/solute symporter, conserved site LJF99_19240 IPR038377 Sodium/glucose symporter superfamily LJF99_19240 IPR011849 Sodium/pantothenate symporter LJF99_19240 IPR001734 Sodium/solute symporter LJF99_19245 IPR010398 Protein of unknown function DUF997 LJF99_19250 IPR005481 Biotin carboxylase-like, N-terminal domain LJF99_19250 IPR011761 ATP-grasp fold LJF99_19250 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase LJF99_19250 IPR011764 Biotin carboxylation domain LJF99_19250 IPR005482 Biotin carboxylase, C-terminal LJF99_19250 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LJF99_19250 IPR016185 Pre-ATP-grasp domain superfamily LJF99_19250 IPR011054 Rudiment single hybrid motif LJF99_19250 IPR013815 ATP-grasp fold, subdomain 1 LJF99_19255 IPR000089 Biotin/lipoyl attachment LJF99_19255 IPR001249 Acetyl-CoA biotin carboxyl carrier LJF99_19255 IPR011053 Single hybrid motif LJF99_19255 IPR001882 Biotin-binding site LJF99_19260 IPR036441 Dehydroquinase, class II superfamily LJF99_19260 IPR018509 Dehydroquinase, class II, conserved site LJF99_19260 IPR001874 Dehydroquinase, class II LJF99_19265 IPR042099 AMP-dependent synthetase-like superfamily LJF99_19265 IPR000873 AMP-dependent synthetase/ligase LJF99_19265 IPR020845 AMP-binding, conserved site LJF99_19265 IPR025110 AMP-binding enzyme, C-terminal domain LJF99_19265 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain LJF99_19265 IPR011904 Acetate-CoA ligase LJF99_19275 IPR005330 MHYT domain LJF99_19275 IPR000160 GGDEF domain LJF99_19275 IPR029787 Nucleotide cyclase LJF99_19275 IPR001633 EAL domain LJF99_19275 IPR035919 EAL domain superfamily LJF99_19295 IPR036411 TorD-like superfamily LJF99_19295 IPR036386 HscB, C-terminal domain superfamily LJF99_19295 IPR020945 DMSO/Nitrate reductase chaperone LJF99_19295 IPR023069 Chaperone TorD LJF99_19310 IPR039429 Serine hydroxymethyltransferase-like domain LJF99_19310 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site LJF99_19310 IPR001085 Serine hydroxymethyltransferase LJF99_19310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_19310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_19310 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_19325 IPR003796 Ribonucleotide reductase regulator NrdR-like LJF99_19325 IPR005144 ATP-cone domain LJF99_19330 IPR004794 Riboflavin biosynthesis protein RibD LJF99_19330 IPR016192 APOBEC/CMP deaminase, zinc-binding LJF99_19330 IPR002125 Cytidine and deoxycytidylate deaminase domain LJF99_19330 IPR016193 Cytidine deaminase-like LJF99_19330 IPR024072 Dihydrofolate reductase-like domain superfamily LJF99_19330 IPR011549 Riboflavin-specific deaminase, C-terminal LJF99_19330 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal LJF99_19335 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LJF99_19335 IPR001783 Lumazine-binding protein LJF99_19335 IPR026017 Lumazine-binding domain LJF99_19335 IPR017938 Riboflavin synthase-like beta-barrel LJF99_19340 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB LJF99_19340 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LJF99_19340 IPR032677 GTP cyclohydrolase II LJF99_19340 IPR036144 RibA-like superfamily LJF99_19345 IPR034964 Lumazine synthase LJF99_19345 IPR002180 Lumazine/riboflavin synthase LJF99_19345 IPR036467 Lumazine/riboflavin synthase superfamily LJF99_19350 IPR035926 NusB-like superfamily LJF99_19350 IPR006027 NusB/RsmB/TIM44 LJF99_19350 IPR011605 NusB antitermination factor LJF99_19355 IPR036921 PurM-like, N-terminal domain superfamily LJF99_19355 IPR016188 PurM-like, N-terminal domain LJF99_19355 IPR036676 PurM-like, C-terminal domain superfamily LJF99_19355 IPR010918 PurM-like, C-terminal domain LJF99_19355 IPR006283 Thiamine-monophosphate kinase LJF99_19360 IPR036681 PgpA-like superfamily LJF99_19360 IPR007686 YutG/PgpA domain LJF99_19360 IPR026037 Phosphatidylglycerophosphatase A LJF99_19365 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_19365 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LJF99_19365 IPR017871 ABC transporter, conserved site LJF99_19365 IPR003439 ABC transporter-like LJF99_19365 IPR003593 AAA+ ATPase domain LJF99_19370 IPR000914 Solute-binding protein family 5 domain LJF99_19370 IPR023765 Solute-binding protein family 5, conserved site LJF99_19370 IPR039424 Solute-binding protein family 5 LJF99_19370 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_19375 IPR035906 MetI-like superfamily LJF99_19375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_19380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_19380 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LJF99_19380 IPR035906 MetI-like superfamily LJF99_19385 IPR033248 Transketolase, C-terminal domain LJF99_19385 IPR020826 Transketolase binding site LJF99_19385 IPR005475 Transketolase-like, pyrimidine-binding domain LJF99_19385 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LJF99_19385 IPR029061 Thiamin diphosphate-binding fold LJF99_19385 IPR005477 Deoxyxylulose-5-phosphate synthase LJF99_19390 IPR033749 Polyprenyl synthetase, conserved site LJF99_19390 IPR008949 Isoprenoid synthase domain superfamily LJF99_19390 IPR000092 Polyprenyl synthetase LJF99_19395 IPR037004 Exonuclease VII, small subunit superfamily LJF99_19395 IPR003761 Exonuclease VII, small subunit LJF99_19400 IPR000540 Flagellar motor protein MotA, conserved site LJF99_19400 IPR002898 MotA/TolQ/ExbB proton channel LJF99_19405 IPR036737 OmpA-like domain superfamily LJF99_19405 IPR006665 OmpA-like domain LJF99_19405 IPR025713 Motility protein B, N-terminal domain LJF99_19425 IPR023459 Transcription elongation factor GreA/GreB family LJF99_19425 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LJF99_19425 IPR028624 Transcription elongation factor GreA/GreB LJF99_19425 IPR006359 Transcription elongation factor GreA LJF99_19425 IPR018151 Transcription elongation factor, GreA/GreB, conserved site LJF99_19425 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LJF99_19425 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal LJF99_19425 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily LJF99_19435 IPR035920 YhbY-like superfamily LJF99_19435 IPR001890 RNA-binding, CRM domain LJF99_19435 IPR017924 RNA-binding protein YhbY LJF99_19440 IPR015507 Ribosomal RNA large subunit methyltransferase E LJF99_19440 IPR002877 Ribosomal RNA methyltransferase FtsJ domain LJF99_19440 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria LJF99_19440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_19445 IPR000642 Peptidase M41 LJF99_19445 IPR003593 AAA+ ATPase domain LJF99_19445 IPR041569 AAA ATPase, AAA+ lid domain LJF99_19445 IPR003960 ATPase, AAA-type, conserved site LJF99_19445 IPR005936 Peptidase, FtsH LJF99_19445 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_19445 IPR037219 Peptidase M41-like LJF99_19445 IPR011546 Peptidase M41, FtsH extracellular LJF99_19445 IPR003959 ATPase, AAA-type, core LJF99_19450 IPR000489 Pterin-binding domain LJF99_19450 IPR011005 Dihydropteroate synthase-like LJF99_19450 IPR006390 Dihydropteroate synthase LJF99_19455 IPR006352 Phosphoglucosamine mutase, bacterial type LJF99_19455 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LJF99_19455 IPR005841 Alpha-D-phosphohexomutase superfamily LJF99_19455 IPR016066 Alpha-D-phosphohexomutase, conserved site LJF99_19455 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LJF99_19455 IPR005843 Alpha-D-phosphohexomutase, C-terminal LJF99_19455 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LJF99_19455 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LJF99_19455 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LJF99_19460 IPR035990 Triosephosphate isomerase superfamily LJF99_19460 IPR013785 Aldolase-type TIM barrel LJF99_19460 IPR000652 Triosephosphate isomerase LJF99_19460 IPR020861 Triosephosphate isomerase, active site LJF99_19460 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic LJF99_19465 IPR004692 Preprotein translocase SecG subunit LJF99_19480 IPR035956 RimP, N-terminal domain superfamily LJF99_19480 IPR028989 Ribosome maturation factor RimP, N-terminal LJF99_19480 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily LJF99_19480 IPR028998 Ribosome maturation factor RimP, C-terminal LJF99_19480 IPR003728 Ribosome maturation factor RimP LJF99_19485 IPR015946 K homology domain-like, alpha/beta LJF99_19485 IPR010213 Transcription termination factor NusA LJF99_19485 IPR010214 Transcription termination factor NusA, C-terminal duplication LJF99_19485 IPR013735 Transcription factor NusA, N-terminal LJF99_19485 IPR003029 S1 domain LJF99_19485 IPR022967 RNA-binding domain, S1 LJF99_19485 IPR036555 NusA, N-terminal domain superfamily LJF99_19485 IPR030842 Transcription termination/antitermination protein NusA, bacterial LJF99_19485 IPR012340 Nucleic acid-binding, OB-fold LJF99_19485 IPR009019 K homology domain superfamily, prokaryotic type LJF99_19485 IPR025249 KH domain, NusA-like LJF99_19485 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical LJF99_19490 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_19490 IPR006847 Translation initiation factor IF-2, N-terminal LJF99_19490 IPR009000 Translation protein, beta-barrel domain superfamily LJF99_19490 IPR036925 Translation initiation factor IF-2, domain 3 superfamily LJF99_19490 IPR023115 Translation initiation factor IF- 2, domain 3 LJF99_19490 IPR015760 Translation initiation factor IF- 2 LJF99_19490 IPR000795 Transcription factor, GTP-binding domain LJF99_19490 IPR005225 Small GTP-binding protein domain LJF99_19490 IPR009061 Putative DNA-binding domain superfamily LJF99_19490 IPR000178 Translation initiation factor aIF-2, bacterial-like LJF99_19490 IPR013575 Initiation factor 2 associated domain, bacterial LJF99_19495 IPR015946 K homology domain-like, alpha/beta LJF99_19495 IPR000238 Ribosome-binding factor A LJF99_19495 IPR023799 Ribosome-binding factor A domain superfamily LJF99_19495 IPR020053 Ribosome-binding factor A, conserved site LJF99_19500 IPR032819 tRNA pseudouridylate synthase B, C-terminal LJF99_19500 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal LJF99_19500 IPR015947 PUA-like superfamily LJF99_19500 IPR036974 PUA domain superfamily LJF99_19500 IPR002501 Pseudouridine synthase II, N-terminal LJF99_19500 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_19500 IPR014780 tRNA pseudouridine synthase II, TruB LJF99_19505 IPR000589 Ribosomal protein S15 LJF99_19505 IPR005290 Ribosomal protein S15, bacterial-type LJF99_19505 IPR009068 S15/NS1, RNA-binding LJF99_19510 IPR003029 S1 domain LJF99_19510 IPR022967 RNA-binding domain, S1 LJF99_19510 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_19510 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily LJF99_19510 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain LJF99_19510 IPR027408 PNPase/RNase PH domain superfamily LJF99_19510 IPR012162 Polyribonucleotide nucleotidyltransferase LJF99_19510 IPR036612 K Homology domain, type 1 superfamily LJF99_19510 IPR004088 K Homology domain, type 1 LJF99_19510 IPR004087 K Homology domain LJF99_19510 IPR036345 Exoribonuclease, PH domain 2 superfamily LJF99_19510 IPR001247 Exoribonuclease, phosphorolytic domain 1 LJF99_19510 IPR012340 Nucleic acid-binding, OB-fold LJF99_19510 IPR015847 Exoribonuclease, phosphorolytic domain 2 LJF99_19520 IPR039435 Diguanylate cyclase DosC, globin sensor domain LJF99_19520 IPR009050 Globin-like superfamily LJF99_19520 IPR012292 Globin/Protoglobin LJF99_19520 IPR029787 Nucleotide cyclase LJF99_19520 IPR000160 GGDEF domain LJF99_19525 IPR003787 Sulphur relay, DsrE/F-like protein LJF99_19525 IPR027396 DsrEFH-like LJF99_19530 IPR009468 Protein of unknown function DUF1090 LJF99_19540 IPR023172 Peptidase S51, dipeptidase E LJF99_19540 IPR005320 Peptidase S51 LJF99_19540 IPR029062 Class I glutamine amidotransferase-like LJF99_19555 IPR038717 Tc1-like transposase, DDE domain LJF99_19555 IPR009057 Homeobox-like domain superfamily LJF99_19555 IPR025959 Winged helix-turn helix domain LJF99_19555 IPR012337 Ribonuclease H-like superfamily LJF99_19565 IPR003819 TauD/TfdA-like domain LJF99_19565 IPR042098 Taurine dioxygenase TauD-like superfamily LJF99_19570 IPR006326 UDP-glycosyltransferase, MGT LJF99_19570 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase LJF99_19575 IPR041597 L,D-transpeptidase C-terminal domain LJF99_19575 IPR038063 L,D-transpeptidase catalytic domain-like LJF99_19575 IPR005490 L,D-transpeptidase catalytic domain LJF99_19585 IPR002510 Metalloprotease TldD/PmbA LJF99_19585 IPR035068 Metalloprotease TldD/PmbA, N-terminal LJF99_19585 IPR036059 Metalloprotease TldD/PmbA superfamily LJF99_19585 IPR025502 TldD LJF99_19590 IPR025502 TldD LJF99_19590 IPR002510 Metalloprotease TldD/PmbA LJF99_19590 IPR035068 Metalloprotease TldD/PmbA, N-terminal LJF99_19590 IPR036059 Metalloprotease TldD/PmbA superfamily LJF99_19595 IPR008254 Flavodoxin/nitric oxide synthase LJF99_19595 IPR001226 Flavodoxin, conserved site LJF99_19595 IPR010086 Flavodoxin, long chain LJF99_19595 IPR029039 Flavoprotein-like superfamily LJF99_19600 IPR023009 Tyrosine recombinase XerC/XerD LJF99_19600 IPR011932 Tyrosine recombinase XerD LJF99_19600 IPR013762 Integrase-like, catalytic domain superfamily LJF99_19600 IPR010998 Integrase/recombinase, N-terminal LJF99_19600 IPR002104 Integrase, catalytic domain LJF99_19600 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_19600 IPR004107 Integrase, SAM-like, N-terminal LJF99_19605 IPR000160 GGDEF domain LJF99_19605 IPR029787 Nucleotide cyclase LJF99_19610 IPR036019 Gated mechanosensitive channel LJF99_19610 IPR019823 Large-conductance mechanosensitive channel, conserved site LJF99_19610 IPR001185 Large-conductance mechanosensitive channel LJF99_19610 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L LJF99_19620 IPR003156 DHHA1 domain LJF99_19620 IPR004610 Bacterial RecJ exonuclease LJF99_19620 IPR038763 DHH phosphoesterase superfamily LJF99_19620 IPR041122 RecJ, OB domain LJF99_19620 IPR001667 DDH domain LJF99_19630 IPR003667 NqrDE/RnfAE LJF99_19630 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E LJF99_19635 IPR010662 Putative hydrolase RBBP9/YdeN LJF99_19635 IPR029058 Alpha/Beta hydrolase fold LJF99_19640 IPR016181 Acyl-CoA N-acyltransferase LJF99_19640 IPR000182 GNAT domain LJF99_19660 IPR012337 Ribonuclease H-like superfamily LJF99_19660 IPR001584 Integrase, catalytic core LJF99_19660 IPR036397 Ribonuclease H superfamily LJF99_19680 IPR001584 Integrase, catalytic core LJF99_19680 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_19680 IPR036397 Ribonuclease H superfamily LJF99_19680 IPR012337 Ribonuclease H-like superfamily LJF99_19685 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_19685 IPR002611 IstB-like ATP-binding protein LJF99_19685 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_19685 IPR003593 AAA+ ATPase domain LJF99_19710 IPR002641 Patatin-like phospholipase domain LJF99_19710 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LJF99_19725 IPR007197 Radical SAM LJF99_19725 IPR003698 Lipoyl synthase LJF99_19725 IPR031691 Lipoyl synthase, N-terminal LJF99_19725 IPR006638 Elp3/MiaB/NifB LJF99_19725 IPR013785 Aldolase-type TIM barrel LJF99_19730 IPR020605 Octanoyltransferase, conserved site LJF99_19730 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LJF99_19730 IPR000544 Octanoyltransferase LJF99_19735 IPR007454 Uncharacterised protein family UPF0250 LJF99_19735 IPR027471 YbeD-like domain superfamily LJF99_19740 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LJF99_19740 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LJF99_19740 IPR012338 Beta-lactamase/transpeptidase-like LJF99_19740 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LJF99_19740 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LJF99_19740 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LJF99_19745 IPR036680 Sporulation-like domain superfamily LJF99_19745 IPR007730 Sporulation-like domain LJF99_19745 IPR012997 Rare lipoprotein A LJF99_19745 IPR036908 RlpA-like domain superfamily LJF99_19745 IPR009009 RlpA-like protein, double-psi beta-barrel domain LJF99_19745 IPR034718 Endolytic peptidoglycan transglycosylase RlpA LJF99_19755 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LJF99_19755 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LJF99_19755 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB LJF99_19760 IPR012338 Beta-lactamase/transpeptidase-like LJF99_19760 IPR005311 Penicillin-binding protein, dimerisation domain LJF99_19760 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LJF99_19760 IPR001460 Penicillin-binding protein, transpeptidase LJF99_19760 IPR017790 Penicillin-binding protein 2 LJF99_19765 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LJF99_19765 IPR003742 RNA methyltransferase RlmH LJF99_19765 IPR029028 Alpha/beta knot methyltransferases LJF99_19770 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LJF99_19775 IPR004821 Cytidyltransferase-like domain LJF99_19775 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase LJF99_19775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_19795 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_19795 IPR002300 Aminoacyl-tRNA synthetase, class Ia LJF99_19795 IPR002302 Leucine-tRNA ligase LJF99_19795 IPR025709 Leucyl-tRNA synthetase, editing domain LJF99_19795 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LJF99_19795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_19795 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LJF99_19795 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LJF99_19800 IPR009912 Zinc-ribbon containing domain LJF99_19805 IPR036526 Carbon-nitrogen hydrolase superfamily LJF99_19805 IPR003010 Carbon-nitrogen hydrolase LJF99_19805 IPR004563 Apolipoprotein N-acyltransferase LJF99_19810 IPR005170 Transporter-associated domain LJF99_19810 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_19810 IPR000644 CBS domain LJF99_19810 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_19815 IPR023091 Metalloprotease catalytic domain superfamily, predicted LJF99_19815 IPR002036 Endoribonuclease YbeY LJF99_19815 IPR020549 Endoribonuclease YbeY, conserved site LJF99_19820 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_19820 IPR003714 PhoH-like protein LJF99_19825 IPR023404 Radical SAM, alpha/beta horseshoe LJF99_19825 IPR002792 TRAM domain LJF99_19825 IPR007197 Radical SAM LJF99_19825 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB LJF99_19825 IPR020612 Methylthiotransferase, conserved site LJF99_19825 IPR013848 Methylthiotransferase, N-terminal LJF99_19825 IPR005839 Methylthiotransferase LJF99_19825 IPR006638 Elp3/MiaB/NifB LJF99_19825 IPR038135 Methylthiotransferase, N-terminal domain superfamily LJF99_19830 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 LJF99_19830 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site LJF99_19830 IPR002938 FAD-binding domain LJF99_19830 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_19835 IPR012156 Cold shock, CspA LJF99_19835 IPR011129 Cold shock domain LJF99_19835 IPR019844 Cold-shock (CSD) domain LJF99_19835 IPR002059 Cold-shock protein, DNA-binding LJF99_19835 IPR012340 Nucleic acid-binding, OB-fold LJF99_19840 IPR029787 Nucleotide cyclase LJF99_19840 IPR000160 GGDEF domain LJF99_19840 IPR007894 MASE2 LJF99_19845 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_19845 IPR036390 Winged helix DNA-binding domain superfamily LJF99_19845 IPR005119 LysR, substrate-binding LJF99_19845 IPR000847 Transcription regulator HTH, LysR LJF99_19855 IPR036412 HAD-like superfamily LJF99_19855 IPR006439 HAD hydrolase, subfamily IA LJF99_19855 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_19855 IPR023214 HAD superfamily LJF99_19855 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LJF99_19875 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_19875 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LJF99_19875 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LJF99_19875 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LJF99_19875 IPR036291 NAD(P)-binding domain superfamily LJF99_19885 IPR001059 Translation elongation factor P/YeiP, central LJF99_19885 IPR013185 Translation elongation factor, KOW-like LJF99_19885 IPR020599 Translation elongation factor P/YeiP LJF99_19885 IPR012340 Nucleic acid-binding, OB-fold LJF99_19885 IPR008991 Translation protein SH3-like domain superfamily LJF99_19885 IPR015365 Elongation factor P, C-terminal LJF99_19885 IPR014722 Ribosomal protein L2, domain 2 LJF99_19885 IPR011768 Translation elongation factor P LJF99_19895 IPR015875 IMP dehydrogenase / GMP reductase, conserved site LJF99_19895 IPR005993 GMP reductase LJF99_19895 IPR013785 Aldolase-type TIM barrel LJF99_19895 IPR001093 IMP dehydrogenase/GMP reductase LJF99_19905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_19905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_19905 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_19905 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_19905 IPR013727 Two-component sensor kinase, N-terminal LJF99_19905 IPR003660 HAMP domain LJF99_19905 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_19905 IPR005467 Histidine kinase domain LJF99_19910 IPR001789 Signal transduction response regulator, receiver domain LJF99_19910 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_19910 IPR011006 CheY-like superfamily LJF99_19910 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_19910 IPR039420 Transcriptional regulatory protein WalR-like LJF99_19910 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_19920 IPR036291 NAD(P)-binding domain superfamily LJF99_19920 IPR020904 Short-chain dehydrogenase/reductase, conserved site LJF99_19920 IPR002347 Short-chain dehydrogenase/reductase SDR LJF99_19920 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LJF99_19930 IPR042099 AMP-dependent synthetase-like superfamily LJF99_19930 IPR020845 AMP-binding, conserved site LJF99_19930 IPR000873 AMP-dependent synthetase/ligase LJF99_19945 IPR009351 Protein of unknown function DUF1006 LJF99_19965 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LJF99_19965 IPR003418 Fumarate reductase, subunit D LJF99_19970 IPR003510 Fumarate reductase, subunit C LJF99_19970 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LJF99_19975 IPR036010 2Fe-2S ferredoxin-like superfamily LJF99_19975 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LJF99_19975 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein LJF99_19975 IPR009051 Alpha-helical ferredoxin LJF99_19975 IPR012675 Beta-grasp domain superfamily LJF99_19975 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_19975 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_19975 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LJF99_19975 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal LJF99_19980 IPR005884 Fumarate reductase, flavoprotein subunit LJF99_19980 IPR036188 FAD/NAD(P)-binding domain superfamily LJF99_19980 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site LJF99_19980 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LJF99_19980 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LJF99_19980 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LJF99_19980 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit LJF99_19980 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LJF99_19985 IPR003660 HAMP domain LJF99_19985 IPR004090 Chemotaxis methyl-accepting receptor LJF99_19985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_19985 IPR029151 Periplasmic sensor-like domain superfamily LJF99_19985 IPR000727 Target SNARE coiled-coil homology domain LJF99_19985 IPR033479 Double Cache domain 1 LJF99_19990 IPR030395 Glycerophosphodiester phosphodiesterase domain LJF99_19990 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LJF99_19995 IPR023408 Mechanosensitive ion channel MscS domain superfamily LJF99_19995 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LJF99_19995 IPR010920 LSM domain superfamily LJF99_19995 IPR024393 Mechanosensitive ion channel MscS, porin domain LJF99_19995 IPR025692 Mechanosensitive ion channel inner membrane domain 1 LJF99_19995 IPR011066 Mechanosensitive ion channel MscS, C-terminal LJF99_19995 IPR006686 Mechanosensitive ion channel MscS, conserved site LJF99_19995 IPR006685 Mechanosensitive ion channel MscS LJF99_20000 IPR009057 Homeobox-like domain superfamily LJF99_20000 IPR012337 Ribonuclease H-like superfamily LJF99_20000 IPR038717 Tc1-like transposase, DDE domain LJF99_20000 IPR025959 Winged helix-turn helix domain LJF99_20010 IPR016047 Peptidase M23 LJF99_20010 IPR013731 Opacity-associated protein A, N-terminal LJF99_20010 IPR011055 Duplicated hybrid motif LJF99_20010 IPR018392 LysM domain LJF99_20025 IPR005119 LysR, substrate-binding LJF99_20025 IPR000847 Transcription regulator HTH, LysR LJF99_20025 IPR036390 Winged helix DNA-binding domain superfamily LJF99_20025 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_20045 IPR004090 Chemotaxis methyl-accepting receptor LJF99_20045 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_20045 IPR003660 HAMP domain LJF99_20050 IPR005119 LysR, substrate-binding LJF99_20050 IPR000847 Transcription regulator HTH, LysR LJF99_20050 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_20050 IPR036390 Winged helix DNA-binding domain superfamily LJF99_20055 IPR001460 Penicillin-binding protein, transpeptidase LJF99_20055 IPR012338 Beta-lactamase/transpeptidase-like LJF99_20055 IPR001264 Glycosyl transferase, family 51 LJF99_20055 IPR023346 Lysozyme-like domain superfamily LJF99_20055 IPR036950 Penicillin binding protein transglycosylase domain LJF99_20055 IPR031376 Penicillin-binding protein, OB-like domain LJF99_20060 IPR003494 SHS2 domain inserted in FtsA LJF99_20060 IPR005883 Type IV pilus assembly protein PilM LJF99_20080 IPR021731 AMIN domain LJF99_20080 IPR004845 Type II secretion system GspD, conserved site LJF99_20080 IPR004846 Type II/III secretion system LJF99_20080 IPR011662 Secretin/TonB, short N-terminal domain LJF99_20080 IPR013355 Type IV pilus secretin PilQ LJF99_20080 IPR038591 NolW-like superfamily LJF99_20080 IPR005644 NolW-like LJF99_20080 IPR001775 GspD/PilQ family LJF99_20085 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_20085 IPR031322 Shikimate kinase/gluconokinase LJF99_20085 IPR000623 Shikimate kinase/Threonine synthase-like 1 LJF99_20085 IPR023000 Shikimate kinase, conserved site LJF99_20090 IPR016037 3-dehydroquinate synthase AroB LJF99_20090 IPR030963 3-dehydroquinate synthase family LJF99_20090 IPR030960 3-dehydroquinate synthase domain LJF99_20100 IPR012263 Adenine modification methylase, M.EcoRV-type LJF99_20100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_20100 IPR012327 D12 class N6 adenine-specific DNA methyltransferase LJF99_20100 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_20100 IPR023095 Adenine-specific methyltransferase, domain 2 LJF99_20105 IPR013785 Aldolase-type TIM barrel LJF99_20105 IPR026019 Ribulose-phosphate 3-epimerase LJF99_20105 IPR011060 Ribulose-phosphate binding barrel LJF99_20105 IPR000056 Ribulose-phosphate 3-epimerase-like LJF99_20110 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_20110 IPR023214 HAD superfamily LJF99_20110 IPR037512 Phosphoglycolate phosphatase, prokaryotic LJF99_20110 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LJF99_20110 IPR036412 HAD-like superfamily LJF99_20110 IPR006439 HAD hydrolase, subfamily IA LJF99_20110 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LJF99_20115 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_20115 IPR002305 Aminoacyl-tRNA synthetase, class Ic LJF99_20115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_20115 IPR024109 Tryptophan-tRNA ligase, bacterial-type LJF99_20115 IPR002306 Tryptophan-tRNA ligase LJF99_20125 IPR029062 Class I glutamine amidotransferase-like LJF99_20125 IPR017926 Glutamine amidotransferase LJF99_20125 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain LJF99_20130 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria LJF99_20130 IPR004636 Acetylornithine/Succinylornithine transaminase family LJF99_20130 IPR005814 Aminotransferase class-III LJF99_20130 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_20130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_20130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_20135 IPR007041 Arginine N-succinyltransferase AstA/AruG LJF99_20135 IPR017650 Arginine N-succinyltransferase LJF99_20135 IPR016181 Acyl-CoA N-acyltransferase LJF99_20140 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LJF99_20140 IPR016161 Aldehyde/histidinol dehydrogenase LJF99_20140 IPR016163 Aldehyde dehydrogenase, C-terminal LJF99_20140 IPR016160 Aldehyde dehydrogenase, cysteine active site LJF99_20140 IPR016162 Aldehyde dehydrogenase, N-terminal LJF99_20140 IPR017649 Succinylglutamate-semialdehyde dehydrogenase LJF99_20140 IPR015590 Aldehyde dehydrogenase domain LJF99_20150 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LJF99_20150 IPR006439 HAD hydrolase, subfamily IA LJF99_20150 IPR036412 HAD-like superfamily LJF99_20150 IPR010976 Beta-phosphoglucomutase hydrolase LJF99_20150 IPR023214 HAD superfamily LJF99_20150 IPR041492 Haloacid dehalogenase-like hydrolase LJF99_20155 IPR011701 Major facilitator superfamily LJF99_20155 IPR020846 Major facilitator superfamily domain LJF99_20155 IPR036259 MFS transporter superfamily LJF99_20155 IPR005829 Sugar transporter, conserved site LJF99_20155 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LJF99_20155 IPR036390 Winged helix DNA-binding domain superfamily LJF99_20155 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_20160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LJF99_20160 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LJF99_20160 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LJF99_20160 IPR029061 Thiamin diphosphate-binding fold LJF99_20160 IPR011895 Pyruvate-flavodoxin oxidoreductase LJF99_20160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LJF99_20160 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal LJF99_20160 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II LJF99_20160 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily LJF99_20160 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain LJF99_20160 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain LJF99_20160 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain LJF99_20165 IPR020846 Major facilitator superfamily domain LJF99_20165 IPR005829 Sugar transporter, conserved site LJF99_20165 IPR036259 MFS transporter superfamily LJF99_20165 IPR011701 Major facilitator superfamily LJF99_20170 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_20170 IPR032781 ABC-transporter extension domain LJF99_20170 IPR003593 AAA+ ATPase domain LJF99_20170 IPR003439 ABC transporter-like LJF99_20170 IPR017871 ABC transporter, conserved site LJF99_20180 IPR013780 Glycosyl hydrolase, all-beta LJF99_20180 IPR032091 Maltogenic Amylase, C-terminal LJF99_20180 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_20180 IPR017853 Glycoside hydrolase superfamily LJF99_20190 IPR013126 Heat shock protein 70 family LJF99_20190 IPR018181 Heat shock protein 70, conserved site LJF99_20190 IPR042030 Chaperone protein HscC, nucleotide-binding domain LJF99_20190 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily LJF99_20205 IPR029058 Alpha/Beta hydrolase fold LJF99_20205 IPR013094 Alpha/beta hydrolase fold-3 LJF99_20210 IPR008314 Uncharacterised conserved protein UCP029143 LJF99_20210 IPR007374 ASCH domain LJF99_20210 IPR015947 PUA-like superfamily LJF99_20220 IPR018016 Nucleoside phosphorylase, conserved site LJF99_20220 IPR010058 Uridine phosphorylase LJF99_20220 IPR000845 Nucleoside phosphorylase domain LJF99_20220 IPR035994 Nucleoside phosphorylase superfamily LJF99_20225 IPR006419 Nicotinamide mononucleotide transporter PnuC LJF99_20230 IPR006037 Regulator of K+ conductance, C-terminal LJF99_20230 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_20230 IPR004680 Citrate transporter-like domain LJF99_20230 IPR031312 Sodium/sulphate symporter, conserved site LJF99_20295 IPR041706 YchF, N-terminal LJF99_20295 IPR013029 YchF, C-terminal domain LJF99_20295 IPR023192 TGS-like domain superfamily LJF99_20295 IPR012676 TGS-like LJF99_20295 IPR006073 GTP binding domain LJF99_20295 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_20295 IPR031167 OBG-type guanine nucleotide-binding (G) domain LJF99_20295 IPR012675 Beta-grasp domain superfamily LJF99_20295 IPR004095 TGS LJF99_20295 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 LJF99_20300 IPR001328 Peptidyl-tRNA hydrolase LJF99_20300 IPR036416 Peptidyl-tRNA hydrolase superfamily LJF99_20300 IPR018171 Peptidyl-tRNA hydrolase, conserved site LJF99_20305 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN LJF99_20305 IPR029052 Metallo-dependent phosphatase-like LJF99_20305 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LJF99_20305 IPR006179 5'-Nucleotidase/apyrase LJF99_20305 IPR006146 5'-Nucleotidase, conserved site LJF99_20305 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LJF99_20305 IPR008334 5'-Nucleotidase, C-terminal LJF99_20310 IPR000836 Phosphoribosyltransferase domain LJF99_20310 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type LJF99_20310 IPR005946 Ribose-phosphate pyrophosphokinase LJF99_20310 IPR029057 Phosphoribosyltransferase-like LJF99_20310 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain LJF99_20310 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site LJF99_20320 IPR020568 Ribosomal protein S5 domain 2-type fold LJF99_20320 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase LJF99_20320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LJF99_20320 IPR013750 GHMP kinase, C-terminal domain LJF99_20320 IPR036554 GHMP kinase, C-terminal domain superfamily LJF99_20320 IPR006204 GHMP kinase N-terminal domain LJF99_20325 IPR004565 Outer membrane lipoprotein LolB LJF99_20325 IPR029046 Lipoprotein localisation LolA/LolB/LppX LJF99_20330 IPR018214 Glutamyl-tRNA reductase, conserved site LJF99_20330 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal LJF99_20330 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase LJF99_20330 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain LJF99_20330 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily LJF99_20330 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily LJF99_20330 IPR036291 NAD(P)-binding domain superfamily LJF99_20330 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LJF99_20335 IPR005139 Peptide chain release factor LJF99_20335 IPR000352 Peptide chain release factor class I LJF99_20335 IPR004373 Peptide chain release factor 1 LJF99_20340 IPR004556 Methyltransferase HemK-like LJF99_20340 IPR025714 Methyltransferase domain LJF99_20340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_20340 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific LJF99_20340 IPR040758 Release factor glutamine methyltransferase, N-terminal domain LJF99_20340 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_20355 IPR006218 DAHP synthetase I/KDSA LJF99_20355 IPR006269 3-deoxy-8-phosphooctulonate synthase LJF99_20355 IPR013785 Aldolase-type TIM barrel LJF99_20360 IPR036458 Sodium:dicarboxylate symporter superfamily LJF99_20360 IPR023954 C4-dicarboxylate transport protein LJF99_20360 IPR001991 Sodium:dicarboxylate symporter LJF99_20360 IPR018107 Sodium:dicarboxylate symporter, conserved site LJF99_20365 IPR011140 Autonomous glycyl radical cofactor GrcA LJF99_20365 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LJF99_20365 IPR001150 Glycine radical domain LJF99_20370 IPR009057 Homeobox-like domain superfamily LJF99_20370 IPR012337 Ribonuclease H-like superfamily LJF99_20370 IPR038717 Tc1-like transposase, DDE domain LJF99_20370 IPR025959 Winged helix-turn helix domain LJF99_20380 IPR002043 Uracil-DNA glycosylase family 1 LJF99_20380 IPR018085 Uracil-DNA glycosylase, active site LJF99_20380 IPR005122 Uracil-DNA glycosylase-like LJF99_20380 IPR036895 Uracil-DNA glycosylase-like domain superfamily LJF99_20395 IPR018225 Transaldolase, active site LJF99_20395 IPR013785 Aldolase-type TIM barrel LJF99_20395 IPR001585 Transaldolase/Fructose-6-phosphate aldolase LJF99_20395 IPR004730 Transaldolase type 1 LJF99_20400 IPR001463 Sodium:alanine symporter LJF99_20405 IPR025403 Domain of unknown function DUF4129 LJF99_20405 IPR038765 Papain-like cysteine peptidase superfamily LJF99_20405 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal LJF99_20405 IPR002931 Transglutaminase-like LJF99_20415 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_20415 IPR041628 ChlI/MoxR, AAA lid domain LJF99_20415 IPR011703 ATPase, AAA-3 LJF99_20420 IPR001466 Beta-lactamase-related LJF99_20420 IPR012338 Beta-lactamase/transpeptidase-like LJF99_20420 IPR001586 Beta-lactamase, class-C active site LJF99_20425 IPR023697 Multidrug resistance protein MdtL LJF99_20425 IPR020846 Major facilitator superfamily domain LJF99_20425 IPR036259 MFS transporter superfamily LJF99_20425 IPR011701 Major facilitator superfamily LJF99_20430 IPR005119 LysR, substrate-binding LJF99_20430 IPR000847 Transcription regulator HTH, LysR LJF99_20430 IPR023746 Transcription regulator HTH, YidZ LJF99_20430 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_20430 IPR036390 Winged helix DNA-binding domain superfamily LJF99_20430 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain LJF99_20435 IPR012337 Ribonuclease H-like superfamily LJF99_20435 IPR037027 YqgF/RNase H-like domain superfamily LJF99_20435 IPR005227 Putative pre-16S rRNA nuclease LJF99_20435 IPR006641 YqgF/RNase H-like domain LJF99_20440 IPR003774 Protein of unknown function UPF0301 LJF99_20445 IPR003660 HAMP domain LJF99_20445 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_20445 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LJF99_20445 IPR004090 Chemotaxis methyl-accepting receptor LJF99_20445 IPR000727 Target SNARE coiled-coil homology domain LJF99_20450 IPR004090 Chemotaxis methyl-accepting receptor LJF99_20450 IPR003660 HAMP domain LJF99_20450 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_20455 IPR013815 ATP-grasp fold, subdomain 1 LJF99_20455 IPR004215 Prokaryotic glutathione synthetase, N-terminal LJF99_20455 IPR004218 Prokaryotic glutathione synthetase, ATP-binding LJF99_20455 IPR006284 Glutathione synthetase, prokaryotic LJF99_20455 IPR011761 ATP-grasp fold LJF99_20455 IPR016185 Pre-ATP-grasp domain superfamily LJF99_20460 IPR029028 Alpha/beta knot methyltransferases LJF99_20460 IPR015947 PUA-like superfamily LJF99_20460 IPR006700 Ribosomal RNA small subunit methyltransferase E LJF99_20460 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LJF99_20465 IPR007346 Endonuclease I LJF99_20470 IPR035240 SprT-like, zinc ribbon domain LJF99_20470 IPR006640 SprT-like LJF99_20470 IPR023483 Uncharacterised protein family SprT LJF99_20475 IPR002133 S-adenosylmethionine synthetase LJF99_20475 IPR022628 S-adenosylmethionine synthetase, N-terminal LJF99_20475 IPR022629 S-adenosylmethionine synthetase, central domain LJF99_20475 IPR022630 S-adenosylmethionine synthetase, C-terminal LJF99_20475 IPR022636 S-adenosylmethionine synthetase superfamily LJF99_20475 IPR022631 S-adenosylmethionine synthetase, conserved site LJF99_20480 IPR033247 Transketolase family LJF99_20480 IPR020826 Transketolase binding site LJF99_20480 IPR033248 Transketolase, C-terminal domain LJF99_20480 IPR005474 Transketolase, N-terminal LJF99_20480 IPR005478 Transketolase, bacterial-like LJF99_20480 IPR005475 Transketolase-like, pyrimidine-binding domain LJF99_20480 IPR029061 Thiamin diphosphate-binding fold LJF99_20480 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LJF99_20490 IPR035959 RutC-like superfamily LJF99_20490 IPR006056 RidA family LJF99_20490 IPR019897 RidA, conserved site LJF99_20490 IPR006175 YjgF/YER057c/UK114 family LJF99_20495 IPR005338 Anhydro-N-acetylmuramic acid kinase LJF99_20500 IPR011055 Duplicated hybrid motif LJF99_20500 IPR018392 LysM domain LJF99_20500 IPR013731 Opacity-associated protein A, N-terminal LJF99_20500 IPR016047 Peptidase M23 LJF99_20505 IPR002942 RNA-binding S4 domain LJF99_20505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_20505 IPR002305 Aminoacyl-tRNA synthetase, class Ic LJF99_20505 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LJF99_20505 IPR024088 Tyrosine-tRNA ligase, bacterial-type LJF99_20505 IPR002307 Tyrosine-tRNA ligase LJF99_20505 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 LJF99_20505 IPR036986 RNA-binding S4 domain superfamily LJF99_20520 IPR001173 Glycosyltransferase 2-like LJF99_20520 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_20535 IPR005490 L,D-transpeptidase catalytic domain LJF99_20535 IPR036365 PGBD-like superfamily LJF99_20535 IPR002477 Peptidoglycan binding-like LJF99_20535 IPR038063 L,D-transpeptidase catalytic domain-like LJF99_20540 IPR006311 Twin-arginine translocation pathway, signal sequence LJF99_20540 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LJF99_20540 IPR010275 Protein of unknown function DUF882 LJF99_20550 IPR005115 Uncharacterised domain UPF0126 LJF99_20555 IPR022985 Sulfate transporter CysZ LJF99_20560 IPR011890 Structural maintenance of chromosomes protein, prokaryotic LJF99_20560 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_20560 IPR003395 RecF/RecN/SMC, N-terminal LJF99_20560 IPR024704 Structural maintenance of chromosomes protein LJF99_20560 IPR036277 SMCs flexible hinge superfamily LJF99_20560 IPR010935 SMCs flexible hinge LJF99_20565 IPR007449 ZipA, C-terminal FtsZ-binding domain LJF99_20565 IPR011919 Cell division protein ZipA LJF99_20565 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily LJF99_20570 IPR001357 BRCT domain LJF99_20570 IPR036420 BRCT domain superfamily LJF99_20570 IPR041663 DisA/LigA, helix-hairpin-helix motif LJF99_20570 IPR033136 NAD-dependent DNA ligase, conserved site LJF99_20570 IPR001679 NAD-dependent DNA ligase LJF99_20570 IPR013839 NAD-dependent DNA ligase, adenylation LJF99_20570 IPR013840 NAD-dependent DNA ligase, N-terminal LJF99_20570 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LJF99_20570 IPR012340 Nucleic acid-binding, OB-fold LJF99_20570 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type LJF99_20570 IPR010994 RuvA domain 2-like LJF99_20570 IPR018239 NAD-dependent DNA ligase, active site LJF99_20570 IPR004150 NAD-dependent DNA ligase, OB-fold LJF99_20580 IPR005144 ATP-cone domain LJF99_20580 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LJF99_20580 IPR001150 Glycine radical domain LJF99_20580 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic LJF99_20590 IPR007197 Radical SAM LJF99_20590 IPR013785 Aldolase-type TIM barrel LJF99_20590 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic LJF99_20590 IPR034457 Organic radical-activating enzymes LJF99_20590 IPR001989 Radical-activating enzyme, conserved site LJF99_20615 IPR030196 Multidrug resistance protein MdtN LJF99_20615 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_20615 IPR005694 Efflux pump membrane protein LJF99_20620 IPR023071 Transcriptional regulator, SlyA LJF99_20620 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_20620 IPR036390 Winged helix DNA-binding domain superfamily LJF99_20620 IPR023187 Transcriptional regulator MarR-type, conserved site LJF99_20620 IPR000835 MarR-type HTH domain LJF99_20635 IPR012301 Malic enzyme, N-terminal domain LJF99_20635 IPR023667 NAD-dependent malic enzyme, proteobacteria LJF99_20635 IPR037062 Malic enzyme, N-terminal domain superfamily LJF99_20635 IPR012302 Malic enzyme, NAD-binding LJF99_20635 IPR001891 Malic oxidoreductase LJF99_20635 IPR036291 NAD(P)-binding domain superfamily LJF99_20635 IPR015884 Malic enzyme, conserved site LJF99_20640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_20640 IPR033463 Single cache domain 3 LJF99_20640 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB LJF99_20640 IPR013767 PAS fold LJF99_20640 IPR035965 PAS domain superfamily LJF99_20640 IPR000014 PAS domain LJF99_20640 IPR039506 SpoOB, alpha-helical domain LJF99_20640 IPR005467 Histidine kinase domain LJF99_20640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_20640 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_20640 IPR029151 Periplasmic sensor-like domain superfamily LJF99_20645 IPR024187 Signal transduction response regulator, citrate/malate metabolism LJF99_20645 IPR011006 CheY-like superfamily LJF99_20645 IPR001789 Signal transduction response regulator, receiver domain LJF99_20645 IPR028141 Transcriptional regulator LJF99_20670 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LJF99_20670 IPR029787 Nucleotide cyclase LJF99_20670 IPR000160 GGDEF domain LJF99_20675 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LJF99_20675 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LJF99_20675 IPR037523 Vicinal oxygen chelate (VOC) domain LJF99_20680 IPR011006 CheY-like superfamily LJF99_20680 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_20680 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB LJF99_20680 IPR001789 Signal transduction response regulator, receiver domain LJF99_20680 IPR039420 Transcriptional regulatory protein WalR-like LJF99_20680 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_20685 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR LJF99_20685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_20685 IPR021766 Phosphate regulon sensor protein PhoR LJF99_20685 IPR013767 PAS fold LJF99_20685 IPR035965 PAS domain superfamily LJF99_20685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_20685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_20685 IPR005467 Histidine kinase domain LJF99_20685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_20685 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_20685 IPR000014 PAS domain LJF99_20690 IPR024370 PBP domain LJF99_20690 IPR011862 Phosphate binding protein LJF99_20695 IPR001915 Peptidase M48 LJF99_20695 IPR030873 Beta-barrel assembly-enhancing protease LJF99_20695 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_20705 IPR023505 N-acetyl-D-glucosamine kinase LJF99_20705 IPR000600 ROK family LJF99_20710 IPR005627 Copper homeostasis protein CutC LJF99_20710 IPR036822 Copper homeostasis (CutC) domain superfamily LJF99_20710 IPR023648 Copper homeostasis CutC domain LJF99_20715 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal LJF99_20715 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily LJF99_20715 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LJF99_20720 IPR005978 Nodulation ABC transporter, NodI LJF99_20720 IPR003593 AAA+ ATPase domain LJF99_20720 IPR003439 ABC transporter-like LJF99_20720 IPR017871 ABC transporter, conserved site LJF99_20720 IPR015851 ABC transporter, NodI LJF99_20720 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_20740 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_20740 IPR000086 NUDIX hydrolase domain LJF99_20740 IPR024195 NUDIX hydrolase, YfcD, predicted LJF99_20750 IPR013766 Thioredoxin domain LJF99_20750 IPR013740 Redoxin LJF99_20750 IPR037944 Peroxiredoxin-5-like LJF99_20750 IPR002109 Glutaredoxin LJF99_20750 IPR011767 Glutaredoxin active site LJF99_20750 IPR036249 Thioredoxin-like superfamily LJF99_20755 IPR004481 Sodium/potassium/calcium exchanger LJF99_20755 IPR004837 Sodium/calcium exchanger membrane region LJF99_20760 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LJF99_20760 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site LJF99_20760 IPR000183 Ornithine/DAP/Arg decarboxylase LJF99_20760 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal LJF99_20760 IPR029066 PLP-binding barrel LJF99_20760 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LJF99_20760 IPR002986 Diaminopimelate decarboxylase, LysA LJF99_20765 IPR001463 Sodium:alanine symporter LJF99_20770 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LJF99_20770 IPR024897 Octanoyltransferase LipL LJF99_20775 IPR006042 Xanthine/uracil permease LJF99_20775 IPR006043 Xanthine/uracil/vitamin C permease LJF99_20780 IPR011006 CheY-like superfamily LJF99_20780 IPR000160 GGDEF domain LJF99_20780 IPR029787 Nucleotide cyclase LJF99_20780 IPR001789 Signal transduction response regulator, receiver domain LJF99_20785 IPR019633 Protein of unknown function DUF2498 LJF99_20785 IPR038191 YciN superfamily LJF99_20790 IPR002528 Multi antimicrobial extrusion protein LJF99_20795 IPR018060 DNA binding HTH domain, AraC-type LJF99_20795 IPR009057 Homeobox-like domain superfamily LJF99_20795 IPR018062 HTH domain AraC-type, conserved site LJF99_20800 IPR012301 Malic enzyme, N-terminal domain LJF99_20800 IPR037062 Malic enzyme, N-terminal domain superfamily LJF99_20800 IPR012302 Malic enzyme, NAD-binding LJF99_20800 IPR001891 Malic oxidoreductase LJF99_20800 IPR036291 NAD(P)-binding domain superfamily LJF99_20800 IPR023667 NAD-dependent malic enzyme, proteobacteria LJF99_20800 IPR015884 Malic enzyme, conserved site LJF99_20805 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LJF99_20805 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LJF99_20805 IPR006664 Outer membrane protein, bacterial LJF99_20805 IPR002368 Outer membrane protein, OmpA LJF99_20805 IPR006665 OmpA-like domain LJF99_20805 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_20805 IPR036737 OmpA-like domain superfamily LJF99_20810 IPR036737 OmpA-like domain superfamily LJF99_20810 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_20810 IPR002368 Outer membrane protein, OmpA LJF99_20810 IPR006664 Outer membrane protein, bacterial LJF99_20810 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LJF99_20810 IPR006665 OmpA-like domain LJF99_20810 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LJF99_20815 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LJF99_20815 IPR006664 Outer membrane protein, bacterial LJF99_20815 IPR002368 Outer membrane protein, OmpA LJF99_20815 IPR006665 OmpA-like domain LJF99_20815 IPR006690 Outer membrane protein, OmpA-like, conserved site LJF99_20815 IPR036737 OmpA-like domain superfamily LJF99_20815 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LJF99_20830 IPR000175 Sodium:neurotransmitter symporter LJF99_20830 IPR037272 Sodium:neurotransmitter symporter superfamily LJF99_20835 IPR001423 Lysophospholipase patatin, conserved site LJF99_20835 IPR002641 Patatin-like phospholipase domain LJF99_20835 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LJF99_20840 IPR029787 Nucleotide cyclase LJF99_20840 IPR000160 GGDEF domain LJF99_20840 IPR007894 MASE2 LJF99_20845 IPR022824 Multidrug resistance protein MdtA LJF99_20845 IPR006143 RND efflux pump, membrane fusion protein LJF99_20845 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LJF99_20850 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LJF99_20850 IPR001036 Acriflavin resistance protein LJF99_20860 IPR023404 Radical SAM, alpha/beta horseshoe LJF99_20860 IPR006638 Elp3/MiaB/NifB LJF99_20860 IPR020612 Methylthiotransferase, conserved site LJF99_20860 IPR007197 Radical SAM LJF99_20860 IPR022946 Uncharacterised protein family UPF0313 LJF99_20860 IPR024560 Uncharacterised protein family UPF0313, C-terminal LJF99_20860 IPR013704 Uncharacterised protein family UPF0313, N-terminal LJF99_20890 IPR036291 NAD(P)-binding domain superfamily LJF99_20890 IPR000683 Oxidoreductase, N-terminal LJF99_20895 IPR012337 Ribonuclease H-like superfamily LJF99_20895 IPR036397 Ribonuclease H superfamily LJF99_20895 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site LJF99_20895 IPR002176 Crossover junction endodeoxyribonuclease RuvC LJF99_20900 IPR022357 Major intrinsic protein, conserved site LJF99_20900 IPR000425 Major intrinsic protein LJF99_20900 IPR023271 Aquaporin-like LJF99_20900 IPR034294 Aquaporin transporter LJF99_20900 IPR023743 Aquaporin Z LJF99_20905 IPR011055 Duplicated hybrid motif LJF99_20905 IPR023346 Lysozyme-like domain superfamily LJF99_20905 IPR016047 Peptidase M23 LJF99_20905 IPR010090 Phage tail tape measure protein LJF99_20905 IPR000189 Prokaryotic transglycosylase, active site LJF99_20905 IPR008258 Transglycosylase SLT domain 1 LJF99_20910 IPR017853 Glycoside hydrolase superfamily LJF99_20910 IPR006046 Alpha amylase LJF99_20910 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LJF99_20915 IPR011055 Duplicated hybrid motif LJF99_20915 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase LJF99_20915 IPR016047 Peptidase M23 LJF99_20930 IPR022924 Cardiolipin synthase LJF99_20930 IPR030840 Cardiolipin synthase A LJF99_20930 IPR027379 Cardiolipin synthase N-terminal LJF99_20930 IPR025202 Phospholipase D-like domain LJF99_20930 IPR001736 Phospholipase D/Transphosphatidylase LJF99_20940 IPR002912 ACT domain LJF99_20940 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain LJF99_20940 IPR002376 Formyl transferase, N-terminal LJF99_20940 IPR036477 Formyl transferase, N-terminal domain superfamily LJF99_20940 IPR004810 Formyltetrahydrofolate deformylase LJF99_20945 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LJF99_20945 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB LJF99_20955 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_20960 IPR037143 4'-phosphopantetheinyl transferase domain superfamily LJF99_20960 IPR008278 4'-phosphopantetheinyl transferase domain LJF99_20965 IPR000064 Endopeptidase, NLPC/P60 domain LJF99_20965 IPR038765 Papain-like cysteine peptidase superfamily LJF99_20970 IPR010286 METTL16/RlmF family LJF99_20970 IPR016909 Ribosomal RNA large subunit methyltransferase F LJF99_20970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_20975 IPR029069 HotDog domain superfamily LJF99_20975 IPR002539 MaoC-like dehydratase domain LJF99_20975 IPR039375 Nodulation protein N-like LJF99_20985 IPR018392 LysM domain LJF99_20985 IPR005490 L,D-transpeptidase catalytic domain LJF99_20985 IPR041597 L,D-transpeptidase C-terminal domain LJF99_20985 IPR038063 L,D-transpeptidase catalytic domain-like LJF99_21005 IPR012337 Ribonuclease H-like superfamily LJF99_21005 IPR009057 Homeobox-like domain superfamily LJF99_21005 IPR038717 Tc1-like transposase, DDE domain LJF99_21005 IPR025959 Winged helix-turn helix domain LJF99_21020 IPR036397 Ribonuclease H superfamily LJF99_21020 IPR012337 Ribonuclease H-like superfamily LJF99_21020 IPR001584 Integrase, catalytic core LJF99_21020 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_21025 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21025 IPR002611 IstB-like ATP-binding protein LJF99_21025 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_21025 IPR003593 AAA+ ATPase domain LJF99_21035 IPR006530 YD repeat LJF99_21035 IPR031325 RHS repeat LJF99_21035 IPR022385 Rhs repeat-associated core LJF99_21035 IPR001826 RHS protein LJF99_21070 IPR016195 Polymerase/histidinol phosphatase-like LJF99_21070 IPR023710 Probable phosphatase YcdX LJF99_21070 IPR003141 Polymerase/histidinol phosphatase, N-terminal LJF99_21075 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LJF99_21075 IPR009057 Homeobox-like domain superfamily LJF99_21075 IPR001647 DNA-binding HTH domain, TetR-type LJF99_21080 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type LJF99_21080 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LJF99_21080 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LJF99_21080 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LJF99_21080 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LJF99_21080 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LJF99_21080 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LJF99_21085 IPR001036 Acriflavin resistance protein LJF99_21085 IPR023931 Multidrug resistance protein MdtC LJF99_21085 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LJF99_21095 IPR015806 Pyruvate kinase, insert domain superfamily LJF99_21095 IPR001697 Pyruvate kinase LJF99_21095 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_21095 IPR040442 Pyruvate kinase-like domain superfamily LJF99_21095 IPR018209 Pyruvate kinase, active site LJF99_21095 IPR015793 Pyruvate kinase, barrel LJF99_21095 IPR015795 Pyruvate kinase, C-terminal LJF99_21095 IPR036918 Pyruvate kinase, C-terminal domain superfamily LJF99_21095 IPR011037 Pyruvate kinase-like, insert domain superfamily LJF99_21100 IPR009057 Homeobox-like domain superfamily LJF99_21100 IPR000281 Helix-turn-helix protein RpiR LJF99_21100 IPR035472 RpiR-like, SIS domain LJF99_21100 IPR001347 Sugar isomerase (SIS) LJF99_21100 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_21105 IPR003836 Glucokinase LJF99_21110 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_21110 IPR005467 Histidine kinase domain LJF99_21110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_21110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_21110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_21110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_21110 IPR003660 HAMP domain LJF99_21115 IPR011006 CheY-like superfamily LJF99_21115 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_21115 IPR039420 Transcriptional regulatory protein WalR-like LJF99_21115 IPR001867 OmpR/PhoB-type DNA-binding domain LJF99_21115 IPR001789 Signal transduction response regulator, receiver domain LJF99_21125 IPR002792 TRAM domain LJF99_21125 IPR023404 Radical SAM, alpha/beta horseshoe LJF99_21125 IPR007197 Radical SAM LJF99_21125 IPR041582 RimO, TRAM domain LJF99_21125 IPR005840 Ribosomal protein S12 methylthiotransferase RimO LJF99_21125 IPR038135 Methylthiotransferase, N-terminal domain superfamily LJF99_21125 IPR013848 Methylthiotransferase, N-terminal LJF99_21125 IPR020612 Methylthiotransferase, conserved site LJF99_21125 IPR005839 Methylthiotransferase LJF99_21125 IPR006638 Elp3/MiaB/NifB LJF99_21130 IPR001789 Signal transduction response regulator, receiver domain LJF99_21130 IPR037522 HD-GYP domain LJF99_21130 IPR011006 CheY-like superfamily LJF99_21130 IPR003607 HD/PDEase domain LJF99_21145 IPR002852 Uncharacterised protein family UPF0251 LJF99_21145 IPR013324 RNA polymerase sigma factor, region 3/4-like LJF99_21145 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_21160 IPR013108 Amidohydrolase 3 LJF99_21160 IPR011059 Metal-dependent hydrolase, composite domain superfamily LJF99_21160 IPR032466 Metal-dependent hydrolase LJF99_21160 IPR033932 YtcJ like LJF99_21170 IPR001624 Flagellar hook-basal body complex protein FliE LJF99_21175 IPR013556 Flagellar M-ring C-terminal LJF99_21175 IPR000067 Flagellar M-ring protein FliF LJF99_21175 IPR006182 Secretory protein YscJ/FliF LJF99_21180 IPR000090 Flagellar motor switch protein FliG LJF99_21180 IPR023087 Flagellar motor switch protein FliG, C-terminal LJF99_21180 IPR011002 Flagellar motor switch protein FliG, alpha-helical LJF99_21180 IPR032779 Flagellar motor switch protein FliG, middle domain LJF99_21180 IPR028263 Flagellar motor switch protein FliG, N-terminal domain LJF99_21190 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LJF99_21190 IPR032463 ATPase, type III secretion system, FliI LJF99_21190 IPR003593 AAA+ ATPase domain LJF99_21190 IPR020005 Flagellar export ATPase FliI, clade 1 LJF99_21190 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21190 IPR040627 T3SS EscN ATPase, C-terminal LJF99_21190 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LJF99_21190 IPR005714 ATPase, type III secretion system, FliI/YscN LJF99_21210 IPR036429 SpoA-like superfamily LJF99_21210 IPR028976 CheC-like superfamily LJF99_21210 IPR001543 Surface presentation of antigen (SpoA) LJF99_21210 IPR001689 Flagellar motor switch protein FliM LJF99_21215 IPR001543 Surface presentation of antigen (SpoA) LJF99_21215 IPR036429 SpoA-like superfamily LJF99_21215 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb LJF99_21215 IPR012826 Flagellar motor switch FliN LJF99_21220 IPR022781 Flagellar biosynthesis protein, FliO LJF99_21225 IPR005838 Type III secretion system inner membrane P protein LJF99_21225 IPR005837 Flagellar transport protein FliP LJF99_21230 IPR002191 Bacterial export protein family 3 LJF99_21230 IPR006305 Flagellar biosynthesis protein FliQ LJF99_21235 IPR002010 Type III secretion system inner membrane R protein LJF99_21235 IPR006303 Flagellar biosynthesis protein FliR LJF99_21240 IPR006135 Type III secretion system substrate exporter LJF99_21240 IPR006136 Flagellar biosynthetic protein FlhB LJF99_21240 IPR029025 Type III secretion system substrate exporter, C-terminal LJF99_21245 IPR042193 FHIPEP, domain 3 LJF99_21245 IPR025505 FHIPEP conserved site LJF99_21245 IPR006301 Flagellar biosynthesis protein FlhA LJF99_21245 IPR042196 FHIPEP, domain 4 LJF99_21245 IPR042194 FHIPEP, domain 1 LJF99_21245 IPR001712 Type III secretion system FHIPEP LJF99_21250 IPR003593 AAA+ ATPase domain LJF99_21250 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21250 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LJF99_21250 IPR020006 Flagellar biosynthesis protein FlhF LJF99_21255 IPR025501 ATP binding protein MinD LJF99_21255 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21255 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 LJF99_21260 IPR007630 RNA polymerase sigma-70 region 4 LJF99_21260 IPR028617 RNA polymerase sigma factor FliA LJF99_21260 IPR007624 RNA polymerase sigma-70 region 3 LJF99_21260 IPR013324 RNA polymerase sigma factor, region 3/4-like LJF99_21260 IPR000943 RNA polymerase sigma-70 LJF99_21260 IPR014284 RNA polymerase sigma-70 like domain LJF99_21260 IPR013325 RNA polymerase sigma factor, region 2 LJF99_21260 IPR007627 RNA polymerase sigma-70 region 2 LJF99_21260 IPR012845 RNA polymerase sigma factor, FliA/WhiG LJF99_21265 IPR011006 CheY-like superfamily LJF99_21265 IPR001789 Signal transduction response regulator, receiver domain LJF99_21270 IPR007439 Chemotaxis phosphatase, CheZ LJF99_21275 IPR036061 CheW-like domain superfamily LJF99_21275 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily LJF99_21275 IPR004105 Histidine kinase CheA-like, homodimeric domain LJF99_21275 IPR001789 Signal transduction response regulator, receiver domain LJF99_21275 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LJF99_21275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_21275 IPR036641 HPT domain superfamily LJF99_21275 IPR011006 CheY-like superfamily LJF99_21275 IPR002545 CheW-like domain LJF99_21275 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_21275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_21275 IPR005467 Histidine kinase domain LJF99_21275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_21280 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type LJF99_21280 IPR035909 Methylesterase CheB, C-terminal LJF99_21280 IPR011006 CheY-like superfamily LJF99_21280 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase LJF99_21280 IPR001789 Signal transduction response regulator, receiver domain LJF99_21285 IPR000540 Flagellar motor protein MotA, conserved site LJF99_21285 IPR002898 MotA/TolQ/ExbB proton channel LJF99_21290 IPR025713 Motility protein B, N-terminal domain LJF99_21290 IPR006665 OmpA-like domain LJF99_21290 IPR036737 OmpA-like domain superfamily LJF99_21295 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21295 IPR025669 AAA domain LJF99_21305 IPR002545 CheW-like domain LJF99_21305 IPR036061 CheW-like domain superfamily LJF99_21305 IPR039315 Chemotaxis protein CheW LJF99_21320 IPR003593 AAA+ ATPase domain LJF99_21320 IPR003439 ABC transporter-like LJF99_21320 IPR017871 ABC transporter, conserved site LJF99_21320 IPR005895 ABC transporter, haem export, CcmA LJF99_21320 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21325 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LJF99_21325 IPR003544 Cytochrome c-type biogenesis protein CcmB LJF99_21330 IPR003557 Cytochrome c-type biogenesis protein CcmC LJF99_21330 IPR002541 Cytochrome c assembly protein LJF99_21335 IPR007078 Haem exporter protein D (CcmD) LJF99_21340 IPR004329 CcmE/CycJ protein LJF99_21340 IPR036127 CcmE-like superfamily LJF99_21345 IPR003568 Cytochrome c-type biogenesis protein CcmF LJF99_21345 IPR003567 Cytochrome c-type biogenesis protein LJF99_21345 IPR002541 Cytochrome c assembly protein LJF99_21345 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LJF99_21350 IPR017937 Thioredoxin, conserved site LJF99_21350 IPR036249 Thioredoxin-like superfamily LJF99_21350 IPR013740 Redoxin LJF99_21350 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE LJF99_21350 IPR013766 Thioredoxin domain LJF99_21355 IPR005616 CcmH/CycL/Ccl2/NrfF family LJF99_21355 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily LJF99_21355 IPR013026 Tetratricopeptide repeat-containing domain LJF99_21355 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_21355 IPR019734 Tetratricopeptide repeat LJF99_21365 IPR007428 MlaA lipoprotein LJF99_21370 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily LJF99_21370 IPR019832 Manganese/iron superoxide dismutase, C-terminal LJF99_21370 IPR019831 Manganese/iron superoxide dismutase, N-terminal LJF99_21370 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily LJF99_21370 IPR001189 Manganese/iron superoxide dismutase LJF99_21370 IPR019833 Manganese/iron superoxide dismutase, binding site LJF99_21375 IPR014434 Monothiol glutaredoxin LJF99_21375 IPR036249 Thioredoxin-like superfamily LJF99_21375 IPR004480 Monothiol glutaredoxin-related LJF99_21375 IPR002109 Glutaredoxin LJF99_21375 IPR033658 Glutaredoxin, PICOT-like LJF99_21380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_21380 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site LJF99_21380 IPR023267 RNA (C5-cytosine) methyltransferase LJF99_21380 IPR004573 rRNA small subunit methyltransferase B LJF99_21380 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type LJF99_21380 IPR035926 NusB-like superfamily LJF99_21380 IPR006027 NusB/RsmB/TIM44 LJF99_21395 IPR000659 Pyridoxamine 5'-phosphate oxidase LJF99_21395 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site LJF99_21395 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative LJF99_21395 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal LJF99_21395 IPR012349 FMN-binding split barrel LJF99_21415 IPR016181 Acyl-CoA N-acyltransferase LJF99_21415 IPR000182 GNAT domain LJF99_21425 IPR038717 Tc1-like transposase, DDE domain LJF99_21425 IPR025959 Winged helix-turn helix domain LJF99_21425 IPR012337 Ribonuclease H-like superfamily LJF99_21425 IPR009057 Homeobox-like domain superfamily LJF99_21435 IPR039994 JmjC domain-containing LJF99_21435 IPR003347 JmjC domain LJF99_21440 IPR013539 Adenylosuccinate lyase PurB, C-terminal LJF99_21440 IPR008948 L-Aspartase-like LJF99_21440 IPR022761 Fumarate lyase, N-terminal LJF99_21440 IPR004769 Adenylosuccinate lyase LJF99_21440 IPR000362 Fumarate lyase family LJF99_21440 IPR020557 Fumarate lyase, conserved site LJF99_21440 IPR024083 Fumarase/histidase, N-terminal LJF99_21445 IPR007451 High frequency lysogenization protein HflD LJF99_21445 IPR035932 HflD-like superfamily LJF99_21450 IPR023382 Adenine nucleotide alpha hydrolase-like domains LJF99_21450 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LJF99_21450 IPR004506 tRNA-specific 2-thiouridylase LJF99_21455 IPR000086 NUDIX hydrolase domain LJF99_21455 IPR020084 NUDIX hydrolase, conserved site LJF99_21455 IPR033713 Phosphatase NudJ LJF99_21455 IPR020476 NUDIX hydrolase LJF99_21455 IPR015797 NUDIX hydrolase-like domain superfamily LJF99_21460 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LJF99_21460 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_21460 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_21460 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LJF99_21460 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LJF99_21470 IPR003353 Phosphotransferase system, fructose-specific IIB subunit LJF99_21470 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LJF99_21470 IPR013011 Phosphotransferase system, EIIB component, type 2 LJF99_21470 IPR036095 PTS system IIB component-like superfamily LJF99_21475 IPR000849 Sugar phosphate transporter LJF99_21475 IPR011701 Major facilitator superfamily LJF99_21475 IPR020846 Major facilitator superfamily domain LJF99_21475 IPR036259 MFS transporter superfamily LJF99_21475 IPR021159 Glycerate/sugar phosphate transporter, conserved site LJF99_21480 IPR013014 Phosphotransferase system, EIIC component, type 2 LJF99_21480 IPR006327 Phosphotransferase system, fructose IIC component LJF99_21480 IPR004715 Phosphotransferase system, IIA component fructose subfamily LJF99_21480 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LJF99_21480 IPR003353 Phosphotransferase system, fructose-specific IIB subunit LJF99_21480 IPR036095 PTS system IIB component-like superfamily LJF99_21480 IPR013011 Phosphotransferase system, EIIB component, type 2 LJF99_21480 IPR003352 Phosphotransferase system, EIIC LJF99_21480 IPR016152 Phosphotransferase/anion transporter LJF99_21480 IPR002178 PTS EIIA type-2 domain LJF99_21500 IPR009057 Homeobox-like domain superfamily LJF99_21500 IPR012337 Ribonuclease H-like superfamily LJF99_21500 IPR025959 Winged helix-turn helix domain LJF99_21500 IPR038717 Tc1-like transposase, DDE domain LJF99_21510 IPR002028 Tryptophan synthase, alpha chain LJF99_21510 IPR011060 Ribulose-phosphate binding barrel LJF99_21510 IPR018204 Tryptophan synthase, alpha chain, active site LJF99_21510 IPR013785 Aldolase-type TIM barrel LJF99_21515 IPR001926 Pyridoxal-phosphate dependent enzyme LJF99_21515 IPR006653 Tryptophan synthase, beta chain, conserved site LJF99_21515 IPR006654 Tryptophan synthase, beta chain LJF99_21515 IPR023026 Tryptophan synthase beta chain/beta chain-like LJF99_21515 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LJF99_21520 IPR013785 Aldolase-type TIM barrel LJF99_21520 IPR013798 Indole-3-glycerol phosphate synthase LJF99_21520 IPR001468 Indole-3-glycerol phosphate synthase, conserved site LJF99_21520 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) LJF99_21520 IPR011060 Ribulose-phosphate binding barrel LJF99_21525 IPR017459 Glycosyl transferase family 3, N-terminal domain LJF99_21525 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LJF99_21525 IPR000312 Glycosyl transferase, family 3 LJF99_21525 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LJF99_21525 IPR005940 Anthranilate phosphoribosyl transferase LJF99_21530 IPR005940 Anthranilate phosphoribosyl transferase LJF99_21530 IPR029062 Class I glutamine amidotransferase-like LJF99_21530 IPR017926 Glutamine amidotransferase LJF99_21530 IPR000312 Glycosyl transferase, family 3 LJF99_21530 IPR017459 Glycosyl transferase family 3, N-terminal domain LJF99_21530 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LJF99_21530 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LJF99_21530 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain LJF99_21535 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial LJF99_21535 IPR019999 Anthranilate synthase component I-like LJF99_21535 IPR005801 ADC synthase LJF99_21535 IPR006805 Anthranilate synthase component I, N-terminal LJF99_21535 IPR015890 Chorismate-utilising enzyme, C-terminal LJF99_21540 IPR004013 PHP domain LJF99_21540 IPR003141 Polymerase/histidinol phosphatase, N-terminal LJF99_21540 IPR016195 Polymerase/histidinol phosphatase-like LJF99_21545 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LJF99_21545 IPR006070 YrdC-like domain LJF99_21550 IPR003768 Segregation and condensation protein A LJF99_21555 IPR005234 Chromosome segregation/condensation protein ScpB LJF99_21555 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_21555 IPR036390 Winged helix DNA-binding domain superfamily LJF99_21560 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_21560 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_21560 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LJF99_21560 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LJF99_21560 IPR002942 RNA-binding S4 domain LJF99_21560 IPR036986 RNA-binding S4 domain superfamily LJF99_21565 IPR003703 Acyl-CoA thioesterase LJF99_21565 IPR029069 HotDog domain superfamily LJF99_21585 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LJF99_21585 IPR013572 Transcription regulator MAATS, C-terminal LJF99_21585 IPR009057 Homeobox-like domain superfamily LJF99_21585 IPR001647 DNA-binding HTH domain, TetR-type LJF99_21585 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LJF99_21590 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LJF99_21590 IPR006143 RND efflux pump, membrane fusion protein LJF99_21595 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LJF99_21595 IPR001036 Acriflavin resistance protein LJF99_21595 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LJF99_21600 IPR003423 Outer membrane efflux protein LJF99_21600 IPR010131 RND efflux system, outer membrane lipoprotein, NodT LJF99_21605 IPR009057 Homeobox-like domain superfamily LJF99_21605 IPR038717 Tc1-like transposase, DDE domain LJF99_21605 IPR012337 Ribonuclease H-like superfamily LJF99_21605 IPR025959 Winged helix-turn helix domain LJF99_21610 IPR005888 dTDP-glucose 4,6-dehydratase LJF99_21610 IPR036291 NAD(P)-binding domain superfamily LJF99_21610 IPR016040 NAD(P)-binding domain LJF99_21615 IPR036291 NAD(P)-binding domain superfamily LJF99_21615 IPR029903 RmlD-like substrate binding domain LJF99_21615 IPR005913 dTDP-4-dehydrorhamnose reductase family LJF99_21620 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form LJF99_21620 IPR005835 Nucleotidyl transferase domain LJF99_21620 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_21625 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related LJF99_21625 IPR014710 RmlC-like jelly roll fold LJF99_21625 IPR011051 RmlC-like cupin domain superfamily LJF99_21635 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21635 IPR001482 Type II/IV secretion system protein LJF99_21635 IPR037257 General secretory system II, protein E, N-terminal superfamily LJF99_21635 IPR013369 Type II secretion system GspE LJF99_21635 IPR007831 General secretory system II, protein E, N-terminal LJF99_21635 IPR042181 Type II secretion system, protein E, N-terminal LJF99_21635 IPR003593 AAA+ ATPase domain LJF99_21640 IPR042094 Type II secretion system F domain superfamily LJF99_21640 IPR018076 Type II secretion system F domain LJF99_21640 IPR003004 GspF/PilC family LJF99_21645 IPR012902 Prokaryotic N-terminal methylation site LJF99_21645 IPR013545 Type II secretion system protein G LJF99_21645 IPR010054 General secretion pathway protein G LJF99_21645 IPR000983 Bacterial general secretion pathway protein G-type pilin LJF99_21685 IPR001775 GspD/PilQ family LJF99_21685 IPR005644 NolW-like LJF99_21685 IPR038591 NolW-like superfamily LJF99_21685 IPR004846 Type II/III secretion system LJF99_21685 IPR004845 Type II secretion system GspD, conserved site LJF99_21685 IPR013356 Type II secretion system GspD LJF99_21695 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21695 IPR017871 ABC transporter, conserved site LJF99_21695 IPR003439 ABC transporter-like LJF99_21695 IPR003593 AAA+ ATPase domain LJF99_21710 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like LJF99_21710 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain LJF99_21730 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_21730 IPR006037 Regulator of K+ conductance, C-terminal LJF99_21730 IPR004680 Citrate transporter-like domain LJF99_21730 IPR031312 Sodium/sulphate symporter, conserved site LJF99_21735 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LJF99_21735 IPR006037 Regulator of K+ conductance, C-terminal LJF99_21735 IPR031312 Sodium/sulphate symporter, conserved site LJF99_21735 IPR004680 Citrate transporter-like domain LJF99_21750 IPR001509 NAD-dependent epimerase/dehydratase LJF99_21750 IPR036291 NAD(P)-binding domain superfamily LJF99_21755 IPR000715 Glycosyl transferase, family 4 LJF99_21755 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site LJF99_21760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_21760 IPR036291 NAD(P)-binding domain superfamily LJF99_21760 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain LJF99_21775 IPR001173 Glycosyltransferase 2-like LJF99_21775 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_21790 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LJF99_21790 IPR001296 Glycosyl transferase, family 1 LJF99_21805 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LJF99_21805 IPR003362 Bacterial sugar transferase LJF99_21815 IPR007432 Protein of unknown function DUF480 LJF99_21815 IPR036388 Winged helix-like DNA-binding domain superfamily LJF99_21815 IPR036390 Winged helix DNA-binding domain superfamily LJF99_21820 IPR038718 SNF2-like, N-terminal domain superfamily LJF99_21820 IPR007527 Zinc finger, SWIM-type LJF99_21820 IPR000330 SNF2-related, N-terminal domain LJF99_21820 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21820 IPR001650 Helicase, C-terminal LJF99_21820 IPR014001 Helicase superfamily 1/2, ATP-binding domain LJF99_21830 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_21830 IPR001584 Integrase, catalytic core LJF99_21830 IPR012337 Ribonuclease H-like superfamily LJF99_21830 IPR036397 Ribonuclease H superfamily LJF99_21835 IPR003593 AAA+ ATPase domain LJF99_21835 IPR002611 IstB-like ATP-binding protein LJF99_21835 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_21835 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_21850 IPR007036 Succinylglutamate desuccinylase/aspartoacylase LJF99_21850 IPR016681 Succinylglutamate desuccinylase LJF99_21855 IPR001017 Dehydrogenase, E1 component LJF99_21855 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha LJF99_21855 IPR029061 Thiamin diphosphate-binding fold LJF99_21860 IPR033248 Transketolase, C-terminal domain LJF99_21860 IPR005475 Transketolase-like, pyrimidine-binding domain LJF99_21860 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LJF99_21860 IPR029061 Thiamin diphosphate-binding fold LJF99_21865 IPR009057 Homeobox-like domain superfamily LJF99_21865 IPR012337 Ribonuclease H-like superfamily LJF99_21865 IPR025959 Winged helix-turn helix domain LJF99_21865 IPR038717 Tc1-like transposase, DDE domain LJF99_21870 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LJF99_21870 IPR036625 E3-binding domain superfamily LJF99_21870 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LJF99_21870 IPR004167 Peripheral subunit-binding domain LJF99_21870 IPR011053 Single hybrid motif LJF99_21870 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LJF99_21870 IPR000089 Biotin/lipoyl attachment LJF99_21875 IPR012156 Cold shock, CspA LJF99_21875 IPR011129 Cold shock domain LJF99_21875 IPR019844 Cold-shock (CSD) domain LJF99_21875 IPR002059 Cold-shock protein, DNA-binding LJF99_21875 IPR012340 Nucleic acid-binding, OB-fold LJF99_21915 IPR006674 HD domain LJF99_21915 IPR037522 HD-GYP domain LJF99_21915 IPR006675 HDIG domain LJF99_21915 IPR003607 HD/PDEase domain LJF99_21915 IPR021812 Protein of unknown function DUF3391 LJF99_21920 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LJF99_21920 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LJF99_21920 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LJF99_21920 IPR006145 Pseudouridine synthase, RsuA/RluA LJF99_21920 IPR020103 Pseudouridine synthase, catalytic domain superfamily LJF99_21920 IPR036986 RNA-binding S4 domain superfamily LJF99_21920 IPR002942 RNA-binding S4 domain LJF99_21930 IPR039424 Solute-binding protein family 5 LJF99_21930 IPR023765 Solute-binding protein family 5, conserved site LJF99_21930 IPR000914 Solute-binding protein family 5 domain LJF99_21930 IPR030678 Peptide/nickel binding protein, MppA-type LJF99_21935 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type LJF99_21935 IPR041802 YfcE-like, metallophosphatase domain LJF99_21935 IPR020935 Phosphodiesterase YfcE, conserved site LJF99_21935 IPR000979 Phosphodiesterase MJ0936/Vps29 LJF99_21935 IPR029052 Metallo-dependent phosphatase-like LJF99_21955 IPR011006 CheY-like superfamily LJF99_21955 IPR002545 CheW-like domain LJF99_21955 IPR001789 Signal transduction response regulator, receiver domain LJF99_21955 IPR024181 Chemotaxis response regulator CheV LJF99_21955 IPR036061 CheW-like domain superfamily LJF99_21960 IPR000780 MCP methyltransferase, CheR-type LJF99_21960 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LJF99_21960 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LJF99_21960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_21960 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily LJF99_21965 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_21965 IPR006300 Flagellar basal-body rod protein FlgB LJF99_21965 IPR019776 Flagellar basal body rod protein, conserved site LJF99_21970 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_21970 IPR019776 Flagellar basal body rod protein, conserved site LJF99_21970 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_21970 IPR006299 Flagellar basal-body rod protein FlgC LJF99_21980 IPR011491 Flagellar hook protein FlgE LJF99_21980 IPR037058 Flagellar hook protein FlgE superfamily LJF99_21980 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_21980 IPR019776 Flagellar basal body rod protein, conserved site LJF99_21980 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LJF99_21980 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_21980 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LJF99_21985 IPR019776 Flagellar basal body rod protein, conserved site LJF99_21985 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_21985 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_21985 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LJF99_21985 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LJF99_21990 IPR001444 Flagellar basal body rod protein, N-terminal LJF99_21990 IPR019776 Flagellar basal body rod protein, conserved site LJF99_21990 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LJF99_21990 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LJF99_21990 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LJF99_21990 IPR012834 Flagellar basal-body rod FlgG LJF99_21995 IPR000527 Flagellar L-ring protein LJF99_22000 IPR001782 Flagellar P-ring protein LJF99_22005 IPR019301 Flagellar protein FlgJ, N-terminal LJF99_22005 IPR013377 Peptidoglycan hydrolase FlgJ LJF99_22005 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain LJF99_22005 IPR023346 Lysozyme-like domain superfamily LJF99_22020 IPR000644 CBS domain LJF99_22020 IPR006669 Magnesium transporter MgtE LJF99_22020 IPR038048 Magnesium transporter MgtE, transmembrane domain LJF99_22020 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily LJF99_22020 IPR038076 MgtE, N-terminal domain superfamily LJF99_22020 IPR006667 SLC41 divalent cation transporters, integral membrane domain LJF99_22020 IPR006668 Magnesium transporter, MgtE intracellular domain LJF99_22025 IPR030673 Pyrophosphatase, GppA/Ppx-type LJF99_22025 IPR003695 Ppx/GppA phosphatase LJF99_22025 IPR022371 Exopolyphosphatase LJF99_22030 IPR036832 Polyphosphate kinase N-terminal domain superfamily LJF99_22030 IPR025198 Polyphosphate kinase N-terminal domain LJF99_22030 IPR025200 Polyphosphate kinase C-terminal domain 2 LJF99_22030 IPR036830 Polyphosphate kinase middle domain superfamily LJF99_22030 IPR041108 Polyphosphate kinase, C-terminal domain 1 LJF99_22030 IPR003414 Polyphosphate kinase LJF99_22030 IPR001736 Phospholipase D/Transphosphatidylase LJF99_22030 IPR024953 Polyphosphate kinase middle domain LJF99_22050 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_22050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_22050 IPR005467 Histidine kinase domain LJF99_22050 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LJF99_22050 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LJF99_22050 IPR000014 PAS domain LJF99_22050 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LJF99_22050 IPR035965 PAS domain superfamily LJF99_22055 IPR029995 Transcriptional activator SfnR/FlbD LJF99_22055 IPR025944 Sigma-54 interaction domain, conserved site LJF99_22055 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LJF99_22055 IPR002197 DNA binding HTH domain, Fis-type LJF99_22055 IPR002078 RNA polymerase sigma factor 54 interaction domain LJF99_22055 IPR001789 Signal transduction response regulator, receiver domain LJF99_22055 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22055 IPR009057 Homeobox-like domain superfamily LJF99_22055 IPR011006 CheY-like superfamily LJF99_22055 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LJF99_22055 IPR003593 AAA+ ATPase domain LJF99_22060 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily LJF99_22060 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LJF99_22065 IPR036477 Formyl transferase, N-terminal domain superfamily LJF99_22065 IPR001555 Phosphoribosylglycinamide formyltransferase, active site LJF99_22065 IPR004607 Phosphoribosylglycinamide formyltransferase LJF99_22065 IPR002376 Formyl transferase, N-terminal LJF99_22070 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase LJF99_22070 IPR036921 PurM-like, N-terminal domain superfamily LJF99_22070 IPR016188 PurM-like, N-terminal domain LJF99_22070 IPR036676 PurM-like, C-terminal domain superfamily LJF99_22070 IPR010918 PurM-like, C-terminal domain LJF99_22075 IPR005765 Uracil phosphoribosyl transferase LJF99_22075 IPR029057 Phosphoribosyltransferase-like LJF99_22075 IPR034332 Uracil phosphoribosyltransferase, bacterial-type LJF99_22075 IPR000836 Phosphoribosyltransferase domain LJF99_22085 IPR020591 Chromosomal replication control, initiator DnaA-like LJF99_22085 IPR013317 Chromosomal replication initiator protein DnaA LJF99_22085 IPR017788 DnaA regulatory inactivator Hda LJF99_22085 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae LJF99_22085 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22090 IPR040442 Pyruvate kinase-like domain superfamily LJF99_22090 IPR039556 ICL/PEPM domain LJF99_22090 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site LJF99_22090 IPR006254 Isocitrate lyase LJF99_22090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LJF99_22095 IPR011076 Malate synthase-like superfamily LJF99_22095 IPR006252 Malate synthase A LJF99_22095 IPR001465 Malate synthase LJF99_22095 IPR019830 Malate synthase, conserved site LJF99_22105 IPR028883 tRNA-specific adenosine deaminase LJF99_22105 IPR002125 Cytidine and deoxycytidylate deaminase domain LJF99_22105 IPR016192 APOBEC/CMP deaminase, zinc-binding LJF99_22105 IPR016193 Cytidine deaminase-like LJF99_22110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_22110 IPR035906 MetI-like superfamily LJF99_22110 IPR011864 Phosphate ABC transporter, permease protein PstC LJF99_22115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_22115 IPR035906 MetI-like superfamily LJF99_22115 IPR005672 Phosphate transport system permease protein PstA LJF99_22120 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22120 IPR005670 Phosphate transport system permease protein 1 LJF99_22120 IPR017871 ABC transporter, conserved site LJF99_22120 IPR015850 ABC transporter, phosphate import, PstB LJF99_22120 IPR003593 AAA+ ATPase domain LJF99_22120 IPR003439 ABC transporter-like LJF99_22125 IPR038078 PhoU-like domain superfamily LJF99_22125 IPR026022 PhoU domain LJF99_22125 IPR028366 Phosphate transport system protein PhoU LJF99_22130 IPR000644 CBS domain LJF99_22130 IPR002550 CNNM, transmembrane domain LJF99_22130 IPR036318 FAD-binding, type PCMH-like superfamily LJF99_22130 IPR016169 FAD-binding, type PCMH, subdomain 2 LJF99_22130 IPR005170 Transporter-associated domain LJF99_22145 IPR004754 Amino acid antiporter LJF99_22145 IPR002293 Amino acid/polyamine transporter I LJF99_22150 IPR006694 Fatty acid hydroxylase LJF99_22155 IPR003593 AAA+ ATPase domain LJF99_22155 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LJF99_22155 IPR003439 ABC transporter-like LJF99_22155 IPR017871 ABC transporter, conserved site LJF99_22155 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22160 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LJF99_22160 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LJF99_22160 IPR035906 MetI-like superfamily LJF99_22165 IPR018313 Solute-binding protein family 3, conserved site LJF99_22165 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LJF99_22165 IPR001320 Ionotropic glutamate receptor LJF99_22165 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LJF99_22170 IPR035965 PAS domain superfamily LJF99_22170 IPR000700 PAS-associated, C-terminal LJF99_22170 IPR000014 PAS domain LJF99_22170 IPR029787 Nucleotide cyclase LJF99_22170 IPR000160 GGDEF domain LJF99_22170 IPR013656 PAS fold-4 LJF99_22175 IPR011701 Major facilitator superfamily LJF99_22175 IPR020846 Major facilitator superfamily domain LJF99_22175 IPR036259 MFS transporter superfamily LJF99_22175 IPR021159 Glycerate/sugar phosphate transporter, conserved site LJF99_22175 IPR000849 Sugar phosphate transporter LJF99_22180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LJF99_22180 IPR003594 Histidine kinase/HSP90-like ATPase LJF99_22180 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LJF99_22180 IPR007895 MASE1 LJF99_22180 IPR005467 Histidine kinase domain LJF99_22185 IPR011006 CheY-like superfamily LJF99_22185 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_22185 IPR001789 Signal transduction response regulator, receiver domain LJF99_22185 IPR000792 Transcription regulator LuxR, C-terminal LJF99_22190 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LJF99_22190 IPR028625 Regulator of nucleoside diphosphate kinase LJF99_22190 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain LJF99_22190 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LJF99_22190 IPR023459 Transcription elongation factor GreA/GreB family LJF99_22205 IPR001952 Alkaline phosphatase LJF99_22205 IPR018299 Alkaline phosphatase, active site LJF99_22205 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_22210 IPR001952 Alkaline phosphatase LJF99_22210 IPR018299 Alkaline phosphatase, active site LJF99_22210 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_22215 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22215 IPR016478 GTPase, MTG1 LJF99_22215 IPR006073 GTP binding domain LJF99_22215 IPR019991 GTP-binding protein, ribosome biogenesis LJF99_22215 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily LJF99_22215 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LJF99_22220 IPR023696 Ureohydrolase domain superfamily LJF99_22220 IPR037138 Histone deacetylase domain superfamily LJF99_22220 IPR023801 Histone deacetylase domain LJF99_22220 IPR000286 Histone deacetylase family LJF99_22230 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22230 IPR001650 Helicase, C-terminal LJF99_22230 IPR010614 DEAD2 LJF99_22230 IPR006555 ATP-dependent helicase, C-terminal LJF99_22230 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type LJF99_22230 IPR039000 ATP-dependent DNA helicase DinG LJF99_22235 IPR033900 Porin domain, Gram-negative type LJF99_22235 IPR023614 Porin domain superfamily LJF99_22235 IPR001702 Porin, Gram-negative type LJF99_22245 IPR004839 Aminotransferase, class I/classII LJF99_22245 IPR000796 Aspartate/other aminotransferase LJF99_22245 IPR015424 Pyridoxal phosphate-dependent transferase LJF99_22245 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LJF99_22245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LJF99_22245 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LJF99_22250 IPR033186 Helicase HerA-like C-terminal LJF99_22250 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22265 IPR004797 Competence protein ComEC/Rec2 LJF99_22265 IPR035681 ComA-like, MBL domain LJF99_22265 IPR004477 ComEC/Rec2-related protein LJF99_22265 IPR001279 Metallo-beta-lactamase LJF99_22265 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LJF99_22270 IPR003593 AAA+ ATPase domain LJF99_22270 IPR011527 ABC transporter type 1, transmembrane domain LJF99_22270 IPR036640 ABC transporter type 1, transmembrane domain superfamily LJF99_22270 IPR003439 ABC transporter-like LJF99_22270 IPR017871 ABC transporter, conserved site LJF99_22270 IPR011917 ABC transporter, lipid A export, MsbA LJF99_22270 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22270 IPR039421 Type I protein exporter LJF99_22275 IPR003758 Tetraacyldisaccharide 4'-kinase LJF99_22275 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22280 IPR005651 Trm112-like LJF99_22285 IPR029044 Nucleotide-diphospho-sugar transferases LJF99_22285 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase LJF99_22285 IPR003329 Acylneuraminate cytidylyltransferase LJF99_22290 IPR016032 Signal transduction response regulator, C-terminal effector LJF99_22290 IPR000792 Transcription regulator LuxR, C-terminal LJF99_22290 IPR001789 Signal transduction response regulator, receiver domain LJF99_22290 IPR011006 CheY-like superfamily LJF99_22295 IPR036876 UVR domain superfamily LJF99_22295 IPR038476 UvrC homology region 2 superfamily LJF99_22295 IPR001162 UvrC family homology region LJF99_22295 IPR004791 UvrABC system, subunit C LJF99_22295 IPR001943 UVR domain LJF99_22295 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LJF99_22295 IPR035901 GIY-YIG endonuclease superfamily LJF99_22295 IPR000305 GIY-YIG endonuclease LJF99_22295 IPR010994 RuvA domain 2-like LJF99_22300 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial LJF99_22300 IPR000462 CDP-alcohol phosphatidyltransferase LJF99_22300 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase LJF99_22320 IPR009387 Toxin HigB-2 LJF99_22465 IPR027454 Histone-like protein H-NS, N-terminal LJF99_22465 IPR001801 Histone-like protein H-NS LJF99_22465 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LJF99_22465 IPR027444 Histone-like protein H-NS, C-terminal domain LJF99_22490 IPR001584 Integrase, catalytic core LJF99_22490 IPR012337 Ribonuclease H-like superfamily LJF99_22490 IPR036397 Ribonuclease H superfamily LJF99_22490 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_22495 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22495 IPR003593 AAA+ ATPase domain LJF99_22495 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_22495 IPR002611 IstB-like ATP-binding protein LJF99_22515 IPR002765 Uncharacterised protein family UPF0145 LJF99_22515 IPR035439 UPF0145 domain superfamily LJF99_22520 IPR009057 Homeobox-like domain superfamily LJF99_22520 IPR012337 Ribonuclease H-like superfamily LJF99_22520 IPR038717 Tc1-like transposase, DDE domain LJF99_22520 IPR025959 Winged helix-turn helix domain LJF99_22530 IPR016130 Protein-tyrosine phosphatase, active site LJF99_22530 IPR003595 Protein-tyrosine phosphatase, catalytic LJF99_22530 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH LJF99_22530 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily LJF99_22530 IPR000387 Tyrosine specific protein phosphatases domain LJF99_22530 IPR029021 Protein-tyrosine phosphatase-like LJF99_22530 IPR000242 PTP type protein phosphatase LJF99_22530 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal LJF99_22545 IPR001207 Transposase, mutator type LJF99_22555 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22555 IPR025669 AAA domain LJF99_22565 IPR027444 Histone-like protein H-NS, C-terminal domain LJF99_22565 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LJF99_22565 IPR001801 Histone-like protein H-NS LJF99_22565 IPR027454 Histone-like protein H-NS, N-terminal LJF99_22595 IPR025669 AAA domain LJF99_22595 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22600 IPR009057 Homeobox-like domain superfamily LJF99_22600 IPR006120 Resolvase, HTH domain LJF99_22600 IPR006119 Resolvase, N-terminal catalytic domain LJF99_22600 IPR006118 Recombinase, conserved site LJF99_22600 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LJF99_22610 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_22610 IPR012549 Phosphoethanolamine transferase, N-terminal LJF99_22610 IPR040423 Phosphoethanolamine transferase LJF99_22610 IPR000917 Sulfatase, N-terminal LJF99_22615 IPR017850 Alkaline-phosphatase-like, core domain superfamily LJF99_22615 IPR012549 Phosphoethanolamine transferase, N-terminal LJF99_22615 IPR040423 Phosphoethanolamine transferase LJF99_22615 IPR000917 Sulfatase, N-terminal LJF99_22635 IPR000021 Hok/gef cell toxic protein LJF99_22640 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22640 IPR002611 IstB-like ATP-binding protein LJF99_22640 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_22640 IPR003593 AAA+ ATPase domain LJF99_22645 IPR036397 Ribonuclease H superfamily LJF99_22645 IPR001584 Integrase, catalytic core LJF99_22645 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_22645 IPR012337 Ribonuclease H-like superfamily LJF99_22675 IPR007159 SpoVT-AbrB domain LJF99_22675 IPR037914 SpoVT-AbrB domain superfamily LJF99_22685 IPR037518 MPN domain LJF99_22685 IPR025657 RadC-like JAB domain LJF99_22685 IPR010994 RuvA domain 2-like LJF99_22685 IPR001405 Uncharacterised protein family UPF0758 LJF99_22685 IPR020891 Uncharacterised protein family UPF0758, conserved site LJF99_22705 IPR002941 DNA methylase N-4/N-6 LJF99_22705 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_22705 IPR001091 Restriction/modification DNA-methylase LJF99_22705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_22715 IPR038025 Antitoxin CbeA superfamily LJF99_22715 IPR009320 Antitoxin CbeA LJF99_22730 IPR008258 Transglycosylase SLT domain 1 LJF99_22730 IPR023346 Lysozyme-like domain superfamily LJF99_22740 IPR040668 TraI, 2B/2B-like domain LJF99_22740 IPR009767 DNA helicase, TraI type LJF99_22740 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22740 IPR040987 TraI, N-terminal subdomain LJF99_22740 IPR014129 Conjugative transfer relaxase protein TraI LJF99_22740 IPR014059 Conjugative relaxase, N-terminal LJF99_22740 IPR014862 TrwC relaxase LJF99_22745 IPR006120 Resolvase, HTH domain LJF99_22745 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LJF99_22745 IPR006119 Resolvase, N-terminal catalytic domain LJF99_22745 IPR006118 Recombinase, conserved site LJF99_22745 IPR009057 Homeobox-like domain superfamily LJF99_22760 IPR002513 Tn3 transposase DDE domain LJF99_22760 IPR025296 Domain of unknown function DUF4158 LJF99_22780 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22780 IPR025669 AAA domain LJF99_22795 IPR002104 Integrase, catalytic domain LJF99_22795 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_22795 IPR013762 Integrase-like, catalytic domain superfamily LJF99_22795 IPR016423 Resolvase, Rsv LJF99_22880 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal LJF99_22880 IPR003346 Transposase, IS116/IS110/IS902 LJF99_22895 IPR019093 Rac1-binding domain LJF99_22895 IPR003547 Serine/threonine protein kinase, yersinia-type LJF99_22895 IPR008271 Serine/threonine-protein kinase, active site LJF99_22895 IPR000719 Protein kinase domain LJF99_22895 IPR011009 Protein kinase-like domain superfamily LJF99_22905 IPR000021 Hok/gef cell toxic protein LJF99_22905 IPR018084 Hok/gef cell toxic protein, conserved site LJF99_22930 IPR009057 Homeobox-like domain superfamily LJF99_22930 IPR012337 Ribonuclease H-like superfamily LJF99_22930 IPR025959 Winged helix-turn helix domain LJF99_22930 IPR038717 Tc1-like transposase, DDE domain LJF99_22935 IPR012337 Ribonuclease H-like superfamily LJF99_22935 IPR036397 Ribonuclease H superfamily LJF99_22935 IPR001584 Integrase, catalytic core LJF99_22935 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LJF99_22940 IPR002611 IstB-like ATP-binding protein LJF99_22940 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LJF99_22940 IPR003593 AAA+ ATPase domain LJF99_22940 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_22945 IPR001207 Transposase, mutator type LJF99_22950 IPR029058 Alpha/Beta hydrolase fold LJF99_22950 IPR000073 Alpha/beta hydrolase fold-1 LJF99_22970 IPR003540 ADP ribosyltransferase LJF99_22980 IPR006135 Type III secretion system substrate exporter LJF99_22980 IPR006307 Type III exporter system, secretion apparatus protein BsaZ LJF99_22980 IPR029025 Type III secretion system substrate exporter, C-terminal LJF99_22985 IPR006304 Type III secretion protein SpaR/YscT LJF99_22985 IPR002010 Type III secretion system inner membrane R protein LJF99_22990 IPR002191 Bacterial export protein family 3 LJF99_22990 IPR006306 Type III secretion protein HrpO LJF99_22995 IPR005773 Yop virulence translocation protein R LJF99_22995 IPR005838 Type III secretion system inner membrane P protein LJF99_23000 IPR001543 Surface presentation of antigen (SpoA) LJF99_23000 IPR036429 SpoA-like superfamily LJF99_23000 IPR003283 Type III secretion system outer membrane, SpaO LJF99_23000 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO LJF99_23015 IPR040627 T3SS EscN ATPase, C-terminal LJF99_23015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23015 IPR013380 ATPase, type III secretion system, H+-transporting LJF99_23015 IPR005714 ATPase, type III secretion system, FliI/YscN LJF99_23015 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LJF99_23015 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LJF99_23015 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LJF99_23015 IPR003593 AAA+ ATPase domain LJF99_23020 IPR010812 Hypersensitivity response secretion-like, HrpJ LJF99_23020 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC LJF99_23025 IPR015144 Type III secretion system effector delivery regulator TyeA LJF99_23025 IPR038347 TyeA superfamily LJF99_23025 IPR013351 Type III secretion system effector delivery regulator TyeA-related LJF99_23030 IPR012673 Type III secretion system chaperone SycN LJF99_23035 IPR012672 Type III secretion system YscX LJF99_23045 IPR006302 Type III secretion protein HrcV LJF99_23045 IPR001712 Type III secretion system FHIPEP LJF99_23045 IPR025505 FHIPEP conserved site LJF99_23045 IPR042194 FHIPEP, domain 1 LJF99_23045 IPR042196 FHIPEP, domain 4 LJF99_23045 IPR042193 FHIPEP, domain 3 LJF99_23050 IPR013405 Type III secretion system regulator, LcrR LJF99_23050 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 LJF99_23055 IPR009863 Type III secretion protein, LcrG LJF99_23060 IPR005413 Low calcium response V antigen LJF99_23060 IPR036139 Virulence-associated V antigen superfamily LJF99_23065 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD LJF99_23065 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup LJF99_23065 IPR011716 Tetratricopeptide TPR-3 LJF99_23065 IPR013026 Tetratricopeptide repeat-containing domain LJF99_23065 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_23070 IPR006972 Secretion system effector C, SseC-like LJF99_23075 IPR008898 YopD-like LJF99_23080 IPR010261 Tir chaperone protein (CesT) family LJF99_23090 IPR039366 YscW/ExsB LJF99_23095 IPR009057 Homeobox-like domain superfamily LJF99_23095 IPR018060 DNA binding HTH domain, AraC-type LJF99_23095 IPR018062 HTH domain AraC-type, conserved site LJF99_23095 IPR014710 RmlC-like jelly roll fold LJF99_23095 IPR020449 Transcription regulator HTH, AraC- type LJF99_23105 IPR013353 Type III secretion system chaperone YscB LJF99_23105 IPR010261 Tir chaperone protein (CesT) family LJF99_23110 IPR003522 Type III secretion system outer membrane pore YscC/HrcC LJF99_23110 IPR004845 Type II secretion system GspD, conserved site LJF99_23110 IPR038591 NolW-like superfamily LJF99_23110 IPR004846 Type II/III secretion system LJF99_23110 IPR005644 NolW-like LJF99_23115 IPR032030 YscD, cytoplasmic domain LJF99_23115 IPR032034 Yop protein translocation protein D, periplasmic domain LJF99_23115 IPR008984 SMAD/FHA domain superfamily LJF99_23115 IPR000253 Forkhead-associated (FHA) domain LJF99_23115 IPR012843 Type III secretion system YscD/HrpQ LJF99_23125 IPR021123 Type III secretion, needle-protein-like LJF99_23125 IPR037203 Type III secretion, needle-protein-like superfamily LJF99_23125 IPR011841 Type III secretion system, needle protein LJF99_23130 IPR013348 Type III secretion system YscG LJF99_23130 IPR011990 Tetratricopeptide-like helical domain superfamily LJF99_23135 IPR013349 Type III secretion system effector YopR LJF99_23135 IPR041814 Type III secretion system virulence factor YopR, core domain LJF99_23140 IPR012670 Type III secretion system, YscI/HrpB LJF99_23145 IPR006182 Secretory protein YscJ/FliF LJF99_23145 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ LJF99_23150 IPR009510 Type III secretion system, secretion protein K LJF99_23155 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE LJF99_23155 IPR012842 Type III secretion system HrpE/YscL LJF99_23165 IPR003346 Transposase, IS116/IS110/IS902 LJF99_23165 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal LJF99_23185 IPR001207 Transposase, mutator type LJF99_23190 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23190 IPR014059 Conjugative relaxase, N-terminal LJF99_23190 IPR014129 Conjugative transfer relaxase protein TraI LJF99_23190 IPR009767 DNA helicase, TraI type LJF99_23190 IPR040668 TraI, 2B/2B-like domain LJF99_23190 IPR040987 TraI, N-terminal subdomain LJF99_23190 IPR014862 TrwC relaxase LJF99_23195 IPR022585 TraD coupling protein, N-terminal LJF99_23195 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain LJF99_23195 IPR014128 Type IV conjugative transfer system, coupling protein TraD LJF99_23195 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23200 IPR008874 Enterobacterial TraT complement resistance LJF99_23210 IPR012931 TraG-like, N-terminal LJF99_23215 IPR010927 Type IV conjugative transfer system protein TraH LJF99_23220 IPR039555 F plasmid transfer operon protein LJF99_23220 IPR013766 Thioredoxin domain LJF99_23220 IPR036249 Thioredoxin-like superfamily LJF99_23220 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB LJF99_23230 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN LJF99_23240 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC LJF99_23240 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup LJF99_23245 IPR009649 TraU LJF99_23250 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain LJF99_23250 IPR014114 Type-F conjugative transfer system protein TraW LJF99_23260 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23260 IPR014117 Type-IV secretion system protein TraC LJF99_23260 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase LJF99_23265 IPR014118 Type IV conjugative transfer system protein TraV LJF99_23270 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI LJF99_23280 IPR007973 Pilus assembly TraE LJF99_23285 IPR016382 Pilus assembly, TraL LJF99_23285 IPR009838 Type IV conjugative transfer system, protein TraL LJF99_23290 IPR008873 TraA LJF99_23315 IPR025669 AAA domain LJF99_23315 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23330 IPR027444 Histone-like protein H-NS, C-terminal domain LJF99_23330 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LJF99_23330 IPR001801 Histone-like protein H-NS LJF99_23330 IPR027454 Histone-like protein H-NS, N-terminal LJF99_23355 IPR003346 Transposase, IS116/IS110/IS902 LJF99_23355 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal LJF99_23375 IPR039426 Vitamin B12 transporter BtuB-like LJF99_23375 IPR037066 TonB-dependent receptor, plug domain superfamily LJF99_23375 IPR000531 TonB-dependent receptor-like, beta-barrel LJF99_23375 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor LJF99_23375 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LJF99_23375 IPR012910 TonB-dependent receptor, plug domain LJF99_23390 IPR001801 Histone-like protein H-NS LJF99_23390 IPR027454 Histone-like protein H-NS, N-terminal LJF99_23390 IPR027444 Histone-like protein H-NS, C-terminal domain LJF99_23390 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LJF99_23430 IPR001584 Integrase, catalytic core LJF99_23430 IPR012337 Ribonuclease H-like superfamily LJF99_23430 IPR036397 Ribonuclease H superfamily LJF99_23430 IPR025948 HTH-like domain LJF99_23435 IPR001584 Integrase, catalytic core LJF99_23435 IPR025246 Transposase IS30-like HTH domain LJF99_23435 IPR012337 Ribonuclease H-like superfamily LJF99_23435 IPR036397 Ribonuclease H superfamily LJF99_23435 IPR001598 Transposase, IS30, conserved site LJF99_23445 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 LJF99_23445 IPR019591 Mrp/NBP35 ATP-binding protein LJF99_23445 IPR000808 Mrp, conserved site LJF99_23445 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23450 IPR006118 Recombinase, conserved site LJF99_23450 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LJF99_23450 IPR006120 Resolvase, HTH domain LJF99_23450 IPR006119 Resolvase, N-terminal catalytic domain LJF99_23495 IPR029052 Metallo-dependent phosphatase-like LJF99_23495 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LJF99_23500 IPR006119 Resolvase, N-terminal catalytic domain LJF99_23500 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LJF99_23500 IPR006120 Resolvase, HTH domain LJF99_23500 IPR006118 Recombinase, conserved site LJF99_23500 IPR009057 Homeobox-like domain superfamily LJF99_23525 IPR000021 Hok/gef cell toxic protein LJF99_23525 IPR018084 Hok/gef cell toxic protein, conserved site LJF99_23540 IPR020891 Uncharacterised protein family UPF0758, conserved site LJF99_23540 IPR037518 MPN domain LJF99_23540 IPR001405 Uncharacterised protein family UPF0758 LJF99_23540 IPR010994 RuvA domain 2-like LJF99_23540 IPR025657 RadC-like JAB domain LJF99_23560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LJF99_23560 IPR001091 Restriction/modification DNA-methylase LJF99_23560 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LJF99_23560 IPR002941 DNA methylase N-4/N-6 LJF99_23575 IPR038025 Antitoxin CbeA superfamily LJF99_23575 IPR009320 Antitoxin CbeA LJF99_23590 IPR023346 Lysozyme-like domain superfamily LJF99_23590 IPR008258 Transglycosylase SLT domain 1 LJF99_23595 IPR007925 Relaxosome protein TraM LJF99_23595 IPR042073 TraM, DNA-binding domain LJF99_23595 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LJF99_23600 IPR014862 TrwC relaxase LJF99_23600 IPR014129 Conjugative transfer relaxase protein TraI LJF99_23600 IPR014059 Conjugative relaxase, N-terminal LJF99_23600 IPR040668 TraI, 2B/2B-like domain LJF99_23600 IPR040987 TraI, N-terminal subdomain LJF99_23600 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23600 IPR009767 DNA helicase, TraI type LJF99_23605 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain LJF99_23605 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23605 IPR014128 Type IV conjugative transfer system, coupling protein TraD LJF99_23605 IPR022585 TraD coupling protein, N-terminal LJF99_23610 IPR008874 Enterobacterial TraT complement resistance LJF99_23620 IPR012931 TraG-like, N-terminal LJF99_23625 IPR010927 Type IV conjugative transfer system protein TraH LJF99_23630 IPR013766 Thioredoxin domain LJF99_23630 IPR036249 Thioredoxin-like superfamily LJF99_23630 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB LJF99_23630 IPR039555 F plasmid transfer operon protein LJF99_23640 IPR039555 F plasmid transfer operon protein LJF99_23640 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF LJF99_23645 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN LJF99_23650 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC LJF99_23650 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup LJF99_23655 IPR009649 TraU LJF99_23660 IPR014114 Type-F conjugative transfer system protein TraW LJF99_23660 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain LJF99_23670 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase LJF99_23670 IPR014117 Type-IV secretion system protein TraC LJF99_23670 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23675 IPR014118 Type IV conjugative transfer system protein TraV LJF99_23680 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI LJF99_23690 IPR007973 Pilus assembly TraE LJF99_23695 IPR009838 Type IV conjugative transfer system, protein TraL LJF99_23695 IPR016382 Pilus assembly, TraL LJF99_23700 IPR008873 TraA LJF99_23725 IPR013430 Toxin-antitoxin system, antidote protein, HigA LJF99_23725 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LJF99_23725 IPR001387 Cro/C1-type helix-turn-helix domain LJF99_23755 IPR029057 Phosphoribosyltransferase-like LJF99_23755 IPR000836 Phosphoribosyltransferase domain LJF99_23770 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23770 IPR025669 AAA domain LJF99_23775 IPR042075 KorB DNA-binding domain LJF99_23775 IPR008988 Transcriptional repressor, C-terminal LJF99_23775 IPR036086 ParB/Sulfiredoxin superfamily LJF99_23775 IPR003115 ParB/Sulfiredoxin LJF99_23775 IPR004437 ParB/RepB/Spo0J partition protein LJF99_23775 IPR013741 Repressor KorB domain LJF99_23775 IPR037048 KorB, C-terminal domain superfamily LJF99_23775 IPR010575 KorB, C-terminal LJF99_23800 IPR006171 TOPRIM domain LJF99_23800 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain LJF99_23800 IPR041459 Polyvalent protein, metallopeptidase domain LJF99_23800 IPR013610 Domain of unknown function DUF1738 LJF99_23810 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain LJF99_23810 IPR041459 Polyvalent protein, metallopeptidase domain LJF99_23810 IPR013610 Domain of unknown function DUF1738 LJF99_23810 IPR006171 TOPRIM domain LJF99_23815 IPR003688 Type IV secretion system protein TraG/VirD4 LJF99_23815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23820 IPR014155 Type IV secretion system protein VirB11 LJF99_23820 IPR001482 Type II/IV secretion system protein LJF99_23820 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23820 IPR003593 AAA+ ATPase domain LJF99_23825 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI LJF99_23825 IPR042217 Type IV secretion system, VirB10/TrbI LJF99_23830 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily LJF99_23830 IPR014148 P-type conjugative transfer protein VirB9 LJF99_23830 IPR033645 VirB9/CagX/TrbG, C-terminal LJF99_23830 IPR010258 Conjugal transfer, TrbG/VirB9/CagX LJF99_23835 IPR026264 Type IV secretion system protein VirB8/PtlE LJF99_23835 IPR007430 Bacterial virulence protein VirB8 LJF99_23835 IPR032710 NTF2-like domain superfamily LJF99_23845 IPR007688 Plasmid conjugal transfer TrbL/VirB6 LJF99_23860 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain LJF99_23860 IPR003593 AAA+ ATPase domain LJF99_23860 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_23860 IPR004346 CagE, TrbE, VirB component of type IV transporter system LJF99_23880 IPR013498 DNA topoisomerase, type IA, zn finger LJF99_23880 IPR034149 DNA topoisomerase 1, TOPRIM domain LJF99_23880 IPR006171 TOPRIM domain LJF99_23880 IPR023406 DNA topoisomerase, type IA, active site LJF99_23880 IPR013497 DNA topoisomerase, type IA, central LJF99_23880 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LJF99_23880 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LJF99_23880 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LJF99_23880 IPR023405 DNA topoisomerase, type IA, core domain LJF99_23880 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LJF99_23880 IPR028612 DNA topoisomerase I, type IA LJF99_23880 IPR003601 DNA topoisomerase, type IA, domain 2 LJF99_23880 IPR005733 DNA topoisomerase I, bacterial-type LJF99_23880 IPR000380 DNA topoisomerase, type IA LJF99_23890 IPR013497 DNA topoisomerase, type IA, central LJF99_23890 IPR034149 DNA topoisomerase 1, TOPRIM domain LJF99_23890 IPR006171 TOPRIM domain LJF99_23890 IPR028612 DNA topoisomerase I, type IA LJF99_23890 IPR005733 DNA topoisomerase I, bacterial-type LJF99_23890 IPR013498 DNA topoisomerase, type IA, zn finger LJF99_23890 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LJF99_23890 IPR023405 DNA topoisomerase, type IA, core domain LJF99_23890 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LJF99_23890 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LJF99_23890 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LJF99_23890 IPR000380 DNA topoisomerase, type IA LJF99_23890 IPR003601 DNA topoisomerase, type IA, domain 2 LJF99_23890 IPR023406 DNA topoisomerase, type IA, active site LJF99_23920 IPR009057 Homeobox-like domain superfamily LJF99_23920 IPR006120 Resolvase, HTH domain LJF99_23920 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LJF99_23920 IPR006119 Resolvase, N-terminal catalytic domain LJF99_23920 IPR006118 Recombinase, conserved site LJF99_23930 IPR032874 DDE domain LJF99_23930 IPR001584 Integrase, catalytic core LJF99_23930 IPR012337 Ribonuclease H-like superfamily LJF99_23930 IPR036397 Ribonuclease H superfamily LJF99_23940 IPR016181 Acyl-CoA N-acyltransferase LJF99_23945 IPR006390 Dihydropteroate synthase LJF99_23945 IPR011005 Dihydropteroate synthase-like LJF99_23945 IPR000489 Pterin-binding domain LJF99_23950 IPR000390 Small multidrug resistance protein family LJF99_23960 IPR008990 Electron transport accessory-like domain superfamily LJF99_23960 IPR023408 Mechanosensitive ion channel MscS domain superfamily LJF99_23960 IPR009159 Dihydrofolate reductase, type II LJF99_23970 IPR012337 Ribonuclease H-like superfamily LJF99_23970 IPR036397 Ribonuclease H superfamily LJF99_23970 IPR001584 Integrase, catalytic core LJF99_23970 IPR032874 DDE domain LJF99_23980 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LJF99_23980 IPR003012 Tetracycline transcriptional regulator, TetR LJF99_23980 IPR004111 Tetracycline repressor TetR, C-terminal LJF99_23980 IPR001647 DNA-binding HTH domain, TetR-type LJF99_23980 IPR009057 Homeobox-like domain superfamily LJF99_23980 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LJF99_23985 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LJF99_23985 IPR005829 Sugar transporter, conserved site LJF99_23985 IPR036259 MFS transporter superfamily LJF99_23985 IPR011701 Major facilitator superfamily LJF99_23985 IPR020846 Major facilitator superfamily domain LJF99_23995 IPR013762 Integrase-like, catalytic domain superfamily LJF99_23995 IPR002104 Integrase, catalytic domain LJF99_23995 IPR016423 Resolvase, Rsv LJF99_23995 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_24000 IPR032874 DDE domain LJF99_24000 IPR001584 Integrase, catalytic core LJF99_24000 IPR012337 Ribonuclease H-like superfamily LJF99_24000 IPR036397 Ribonuclease H superfamily LJF99_24010 IPR006118 Recombinase, conserved site LJF99_24010 IPR009057 Homeobox-like domain superfamily LJF99_24010 IPR006120 Resolvase, HTH domain LJF99_24010 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LJF99_24010 IPR006119 Resolvase, N-terminal catalytic domain LJF99_24020 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_24020 IPR038724 Regulatory protein RepA LJF99_24030 IPR004111 Tetracycline repressor TetR, C-terminal LJF99_24030 IPR001647 DNA-binding HTH domain, TetR-type LJF99_24030 IPR009057 Homeobox-like domain superfamily LJF99_24030 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LJF99_24030 IPR003012 Tetracycline transcriptional regulator, TetR LJF99_24030 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LJF99_24035 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LJF99_24035 IPR036259 MFS transporter superfamily LJF99_24035 IPR020846 Major facilitator superfamily domain LJF99_24035 IPR011701 Major facilitator superfamily LJF99_24035 IPR005829 Sugar transporter, conserved site LJF99_24045 IPR011010 DNA breaking-rejoining enzyme, catalytic core LJF99_24045 IPR013762 Integrase-like, catalytic domain superfamily LJF99_24045 IPR002104 Integrase, catalytic domain LJF99_24045 IPR016423 Resolvase, Rsv LJF99_24060 IPR027417 P-loop containing nucleoside triphosphate hydrolase LJF99_24060 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LJF99_24075 IPR039459 RepB-like DNA primase domain LJF99_24135 IPR013321 Arc-type ribbon-helix-helix LJF99_24135 IPR007337 RelB antitoxin/Antitoxin DinJ LJF99_24140 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LJF99_24140 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily LJF99_24150 IPR006922 Mobilization protein MbeB-like LJF99_24165 IPR008687 Bacterial mobilisation LJF99_24250 IPR001207 Transposase, mutator type LJF99_24255 IPR005083 Serine/Threonine acetyltransferase, YopJ