locus-tag class description ASA_0001 PF08299 Bacterial dnaA protein helix-turn-helix ASA_0001 PF11638 DnaA N-terminal domain ASA_0001 PF00308 Bacterial dnaA protein ASA_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ASA_0002 PF02767 DNA polymerase III beta subunit, central domain ASA_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ASA_0003 PF02463 RecF/RecN/SMC N terminal domain ASA_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_0004 PF18053 DNA gyrase B subunit insert domain ASA_0004 PF00986 DNA gyrase B subunit, carboxyl terminus ASA_0004 PF00204 DNA gyrase B ASA_0004 PF01751 Toprim domain ASA_0007 PF08279 HTH domain ASA_0007 PF13280 WYL domain ASA_0008 PF00011 Hsp20/alpha crystallin family ASA_0009 PF00011 Hsp20/alpha crystallin family ASA_0012 PF00155 Aminotransferase class I and II ASA_0016 PF00486 Transcriptional regulatory protein, C terminal ASA_0016 PF00072 Response regulator receiver domain ASA_0017 PF13493 Domain of unknown function (DUF4118) ASA_0017 PF13492 GAF domain ASA_0017 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_0017 PF00512 His Kinase A (phospho-acceptor) domain ASA_0017 PF02702 Osmosensitive K+ channel His kinase sensor domain ASA_0018 PF02669 K+-transporting ATPase, c chain ASA_0020 PF03814 Potassium-transporting ATPase A subunit ASA_0021 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_0021 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASA_0022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_0022 PF00512 His Kinase A (phospho-acceptor) domain ASA_0022 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_0023 PF00873 AcrB/AcrD/AcrF family ASA_0024 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_0025 PF00440 Bacterial regulatory proteins, tetR family ASA_0032 PF12146 Serine aminopeptidase, S33 ASA_0033 PF00588 SpoU rRNA Methylase family ASA_0033 PF12105 SpoU, rRNA methylase, C-terminal ASA_0034 PF02824 TGS domain ASA_0034 PF13291 ACT domain ASA_0034 PF04607 Region found in RelA / SpoT proteins ASA_0035 PF01192 RNA polymerase Rpb6 ASA_0036 PF00625 Guanylate kinase ASA_0037 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ASA_0040 PF00892 EamA-like transporter family ASA_0044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0044 PF03466 LysR substrate binding domain ASA_0045 PF00579 tRNA synthetases class I (W and Y) ASA_0046 PF00582 Universal stress protein family ASA_0047 PF07055 Enoyl reductase FAD binding domain ASA_0047 PF12241 Trans-2-enoyl-CoA reductase catalytic region ASA_0047 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ASA_0049 PF00210 Ferritin-like domain ASA_0051 PF01810 LysE type translocator ASA_0060 PF00665 Integrase core domain ASA_0061 PF01695 IstB-like ATP binding protein ASA_0062 PF16449 Fimbrillin MatB ASA_0063 PF00196 Bacterial regulatory proteins, luxR family ASA_0063 PF00072 Response regulator receiver domain ASA_0066 PF00665 Integrase core domain ASA_0066 PF13276 HTH-like domain ASA_0066 PF13333 Integrase core domain ASA_0068 PF07694 5TMR of 5TMR-LYT ASA_0068 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_0068 PF06580 Histidine kinase ASA_0069 PF04397 LytTr DNA-binding domain ASA_0069 PF00072 Response regulator receiver domain ASA_0070 PF07690 Major Facilitator Superfamily ASA_0071 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASA_0071 PF02222 ATP-grasp domain ASA_0071 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ASA_0072 PF00731 AIR carboxylase ASA_0075 PF03466 LysR substrate binding domain ASA_0075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0076 PF07715 TonB-dependent Receptor Plug Domain ASA_0076 PF00593 TonB dependent receptor ASA_0077 PF01177 Asp/Glu/Hydantoin racemase ASA_0084 PF00899 ThiF family ASA_0085 PF02657 Fe-S metabolism associated domain ASA_0086 PF00266 Aminotransferase class-V ASA_0087 PF00580 UvrD/REP helicase N-terminal domain ASA_0087 PF13361 UvrD-like helicase C-terminal domain ASA_0090 PF08240 Alcohol dehydrogenase GroES-like domain ASA_0090 PF00107 Zinc-binding dehydrogenase ASA_0091 PF00155 Aminotransferase class I and II ASA_0092 PF08360 QacR-like protein, C-terminal region ASA_0092 PF00440 Bacterial regulatory proteins, tetR family ASA_0093 PF01370 NAD dependent epimerase/dehydratase family ASA_0094 PF00534 Glycosyl transferases group 1 ASA_0094 PF13439 Glycosyltransferase Family 4 ASA_0097 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) ASA_0100 PF08340 Domain of unknown function (DUF1732) ASA_0100 PF03755 YicC-like family, N-terminal region ASA_0101 PF01138 3' exoribonuclease family, domain 1 ASA_0101 PF03725 3' exoribonuclease family, domain 2 ASA_0102 PF00156 Phosphoribosyl transferase domain ASA_0103 PF00403 Heavy-metal-associated domain ASA_0104 PF13411 MerR HTH family regulatory protein ASA_0105 PF00990 Diguanylate cyclase, GGDEF domain ASA_0105 PF00563 EAL domain ASA_0105 PF01590 GAF domain ASA_0105 PF00360 Phytochrome region ASA_0106 PF06288 Protein of unknown function (DUF1040) ASA_0107 PF13746 4Fe-4S dicluster domain ASA_0107 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ASA_0107 PF12801 4Fe-4S binding domain ASA_0108 PF01636 Phosphotransferase enzyme family ASA_0109 PF01323 DSBA-like thioredoxin domain ASA_0110 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0111 PF00005 ABC transporter ASA_0113 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ASA_0113 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ASA_0114 PF00857 Isochorismatase family ASA_0116 PF04463 Protein of unknown function (DUF523) ASA_0117 PF01553 Acyltransferase ASA_0118 PF13335 Magnesium chelatase, subunit ChlI C-terminal ASA_0118 PF01078 Magnesium chelatase, subunit ChlI ASA_0119 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASA_0119 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASA_0119 PF00205 Thiamine pyrophosphate enzyme, central domain ASA_0121 PF01063 Amino-transferase class IV ASA_0122 PF00920 Dehydratase family ASA_0123 PF00585 C-terminal regulatory domain of Threonine dehydratase ASA_0123 PF00291 Pyridoxal-phosphate dependent enzyme ASA_0124 PF00691 OmpA family ASA_0124 PF01389 OmpA-like transmembrane domain ASA_0126 PF00440 Bacterial regulatory proteins, tetR family ASA_0128 PF00270 DEAD/DEAH box helicase ASA_0128 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ASA_0128 PF18074 Primosomal protein N C-terminal domain ASA_0128 PF17764 3′ DNA-binding domain (3′BD) ASA_0128 PF00271 Helicase conserved C-terminal domain ASA_0129 PF01197 Ribosomal protein L31 ASA_0130 PF13460 NAD(P)H-binding ASA_0130 PF11066 Protein of unknown function (DUF2867) ASA_0131 PF03949 Malic enzyme, NAD binding domain ASA_0131 PF00390 Malic enzyme, N-terminal domain ASA_0133 PF00672 HAMP domain ASA_0133 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_0133 PF00512 His Kinase A (phospho-acceptor) domain ASA_0134 PF00486 Transcriptional regulatory protein, C terminal ASA_0134 PF00072 Response regulator receiver domain ASA_0135 PF05958 tRNA (Uracil-5-)-methyltransferase ASA_0145 PF03811 InsA N-terminal domain ASA_0145 PF12759 InsA C-terminal domain ASA_0148 PF08666 SAF domain ASA_0148 PF03102 NeuB family ASA_0150 PF02348 Cytidylyltransferase ASA_0154 PF13193 AMP-binding enzyme C-terminal domain ASA_0154 PF00501 AMP-binding enzyme ASA_0157 PF00535 Glycosyl transferase family 2 ASA_0158 PF08437 Glycosyl transferase family 8 C-terminal ASA_0158 PF01501 Glycosyl transferase family 8 ASA_0160 PF13358 DDE superfamily endonuclease ASA_0160 PF13592 Winged helix-turn helix ASA_0163 PF02719 Polysaccharide biosynthesis protein ASA_0164 PF02903 Alpha amylase, N-terminal ig-like domain ASA_0164 PF00128 Alpha amylase, catalytic domain ASA_0167 PF00012 Hsp70 protein ASA_0168 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASA_0168 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASA_0169 PF05981 CreA protein ASA_0171 PF01258 Prokaryotic dksA/traR C4-type zinc finger ASA_0172 PF00120 Glutamine synthetase, catalytic domain ASA_0173 PF00202 Aminotransferase class-III ASA_0174 PF13416 Bacterial extracellular solute-binding protein ASA_0175 PF13416 Bacterial extracellular solute-binding protein ASA_0176 PF08402 TOBE domain ASA_0176 PF00005 ABC transporter ASA_0177 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0178 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0179 PF03473 MOSC domain ASA_0179 PF03475 3-alpha domain ASA_0182 PF03061 Thioesterase superfamily ASA_0183 PF00271 Helicase conserved C-terminal domain ASA_0183 PF16124 RecQ zinc-binding ASA_0183 PF00270 DEAD/DEAH box helicase ASA_0183 PF09382 RQC domain ASA_0183 PF00570 HRDC domain ASA_0184 PF00034 Cytochrome c ASA_0185 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ASA_0187 PF02592 Putative vitamin uptake transporter ASA_0189 PF03737 Aldolase/RraA ASA_0191 PF01769 Divalent cation transporter ASA_0191 PF00571 CBS domain ASA_0191 PF03448 MgtE intracellular N domain ASA_0192 PF10414 Sirohaem synthase dimerisation region ASA_0192 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASA_0192 PF14824 Sirohaem biosynthesis protein central ASA_0193 PF01226 Formate/nitrite transporter ASA_0194 PF13806 Rieske-like [2Fe-2S] domain ASA_0196 PF04324 BFD-like [2Fe-2S] binding domain ASA_0196 PF18267 Rubredoxin NAD+ reductase C-terminal domain ASA_0196 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_0196 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ASA_0196 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ASA_0197 PF03466 LysR substrate binding domain ASA_0197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0198 PF07690 Major Facilitator Superfamily ASA_0199 PF10431 C-terminal, D2-small domain, of ClpB protein ASA_0199 PF07724 AAA domain (Cdc48 subfamily) ASA_0199 PF00004 ATPase family associated with various cellular activities (AAA) ASA_0200 PF00227 Proteasome subunit ASA_0202 PF03485 Arginyl tRNA synthetase N terminal domain ASA_0202 PF00750 tRNA synthetases class I (R) ASA_0202 PF05746 DALR anticodon binding domain ASA_0204 PF04545 Sigma-70, region 4 ASA_0204 PF04542 Sigma-70 region 2 ASA_0206 PF02673 Bacitracin resistance protein BacA ASA_0207 PF00248 Aldo/keto reductase family ASA_0208 PF01263 Aldose 1-epimerase ASA_0209 PF00288 GHMP kinases N terminal domain ASA_0209 PF08544 GHMP kinases C terminal ASA_0209 PF10509 Galactokinase galactose-binding signature ASA_0210 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ASA_0210 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ASA_0211 PF16363 GDP-mannose 4,6 dehydratase ASA_0212 PF00356 Bacterial regulatory proteins, lacI family ASA_0214 PF13407 Periplasmic binding protein domain ASA_0215 PF00005 ABC transporter ASA_0217 PF02743 Cache domain ASA_0217 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0217 PF00672 HAMP domain ASA_0223 PF00696 Amino acid kinase family ASA_0224 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASA_0224 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASA_0225 PF03606 C4-dicarboxylate anaerobic carrier ASA_0226 PF02863 Arginine repressor, C-terminal domain ASA_0226 PF01316 Arginine repressor, DNA binding domain ASA_0227 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ASA_0227 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ASA_0228 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASA_0228 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASA_0231 PF02666 Phosphatidylserine decarboxylase ASA_0232 PF02743 Cache domain ASA_0232 PF00672 HAMP domain ASA_0232 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0233 PF08212 Lipocalin-like domain ASA_0234 PF06719 AraC-type transcriptional regulator N-terminus ASA_0234 PF12833 Helix-turn-helix domain ASA_0235 PF00465 Iron-containing alcohol dehydrogenase ASA_0236 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ASA_0236 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ASA_0236 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ASA_0237 PF02233 NAD(P) transhydrogenase beta subunit ASA_0239 PF08348 YheO-like PAS domain ASA_0239 PF13309 HTH domain ASA_0240 PF03313 Serine dehydratase alpha chain ASA_0241 PF00375 Sodium:dicarboxylate symporter family ASA_0242 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASA_0242 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_0243 PF13525 Outer membrane lipoprotein ASA_0244 PF01479 S4 domain ASA_0244 PF00849 RNA pseudouridylate synthase ASA_0246 PF10431 C-terminal, D2-small domain, of ClpB protein ASA_0246 PF02861 Clp amino terminal domain, pathogenicity island component ASA_0246 PF17871 AAA lid domain ASA_0246 PF00004 ATPase family associated with various cellular activities (AAA) ASA_0246 PF07724 AAA domain (Cdc48 subfamily) ASA_0247 PF03590 Aspartate-ammonia ligase ASA_0248 PF01037 Lrp/AsnC ligand binding domain ASA_0251 PF00571 CBS domain ASA_0251 PF00478 IMP dehydrogenase / GMP reductase domain ASA_0254 PF00512 His Kinase A (phospho-acceptor) domain ASA_0254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_0256 PF00158 Sigma-54 interaction domain ASA_0256 PF00072 Response regulator receiver domain ASA_0257 PF06496 Protein of unknown function (DUF1097) ASA_0258 PF00174 Oxidoreductase molybdopterin binding domain ASA_0259 PF01794 Ferric reductase like transmembrane component ASA_0262 PF00072 Response regulator receiver domain ASA_0262 PF00486 Transcriptional regulatory protein, C terminal ASA_0263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_0263 PF08918 PhoQ Sensor ASA_0265 PF01568 Molydopterin dinucleotide binding domain ASA_0265 PF18364 Molybdopterin oxidoreductase N-terminal domain ASA_0265 PF00384 Molybdopterin oxidoreductase ASA_0266 PF03264 NapC/NirT cytochrome c family, N-terminal region ASA_0267 PF01131 DNA topoisomerase ASA_0267 PF01751 Toprim domain ASA_0268 PF02386 Cation transport protein ASA_0269 PF02080 TrkA-C domain ASA_0269 PF02254 TrkA-N domain ASA_0270 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ASA_0270 PF01565 FAD binding domain ASA_0271 PF03099 Biotin/lipoate A/B protein ligase family ASA_0271 PF02237 Biotin protein ligase C terminal domain ASA_0271 PF08279 HTH domain ASA_0272 PF00485 Phosphoribulokinase / Uridine kinase family ASA_0275 PF03144 Elongation factor Tu domain 2 ASA_0275 PF03143 Elongation factor Tu C-terminal domain ASA_0275 PF00009 Elongation factor Tu GTP binding domain ASA_0277 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ASA_0278 PF02357 Transcription termination factor nusG ASA_0278 PF00467 KOW motif ASA_0279 PF03946 Ribosomal protein L11, N-terminal domain ASA_0279 PF00298 Ribosomal protein L11, RNA binding domain ASA_0280 PF00687 Ribosomal protein L1p/L10e family ASA_0281 PF00466 Ribosomal protein L10 ASA_0282 PF16320 Ribosomal protein L7/L12 dimerisation domain ASA_0282 PF00542 Ribosomal protein L7/L12 C-terminal domain ASA_0283 PF04560 RNA polymerase Rpb2, domain 7 ASA_0283 PF04563 RNA polymerase beta subunit ASA_0283 PF04561 RNA polymerase Rpb2, domain 2 ASA_0283 PF10385 RNA polymerase beta subunit external 1 domain ASA_0283 PF04565 RNA polymerase Rpb2, domain 3 ASA_0283 PF00562 RNA polymerase Rpb2, domain 6 ASA_0284 PF05000 RNA polymerase Rpb1, domain 4 ASA_0284 PF04998 RNA polymerase Rpb1, domain 5 ASA_0284 PF00623 RNA polymerase Rpb1, domain 2 ASA_0284 PF04983 RNA polymerase Rpb1, domain 3 ASA_0284 PF04997 RNA polymerase Rpb1, domain 1 ASA_0285 PF08348 YheO-like PAS domain ASA_0285 PF13309 HTH domain ASA_0286 PF01042 Endoribonuclease L-PSP ASA_0287 PF02635 DsrE/DsrF-like family ASA_0288 PF02635 DsrE/DsrF-like family ASA_0289 PF04077 DsrH like protein ASA_0290 PF00164 Ribosomal protein S12/S23 ASA_0291 PF00177 Ribosomal protein S7p/S5e ASA_0292 PF00679 Elongation factor G C-terminus ASA_0292 PF14492 Elongation Factor G, domain II ASA_0292 PF03764 Elongation factor G, domain IV ASA_0292 PF00009 Elongation factor Tu GTP binding domain ASA_0292 PF03144 Elongation factor Tu domain 2 ASA_0293 PF00009 Elongation factor Tu GTP binding domain ASA_0293 PF03144 Elongation factor Tu domain 2 ASA_0293 PF03143 Elongation factor Tu C-terminal domain ASA_0299 PF04363 Protein of unknown function (DUF496) ASA_0301 PF04751 Protein of unknown function (DUF615) ASA_0302 PF01523 Putative modulator of DNA gyrase ASA_0303 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASA_0304 PF01722 BolA-like protein ASA_0306 PF05494 MlaC protein ASA_0307 PF02470 MlaD protein ASA_0308 PF02405 Permease MlaE ASA_0309 PF00005 ABC transporter ASA_0310 PF01380 SIS domain ASA_0310 PF00571 CBS domain ASA_0312 PF06835 Lipopolysaccharide-assembly, LptC-related ASA_0313 PF03968 OstA-like protein ASA_0314 PF00005 ABC transporter ASA_0314 PF12399 Branched-chain amino acid ATP-binding cassette transporter ASA_0315 PF00309 Sigma-54 factor, Activator interacting domain (AID) ASA_0315 PF04552 Sigma-54, DNA binding domain ASA_0315 PF04963 Sigma-54 factor, core binding domain ASA_0316 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ASA_0317 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASA_0318 PF03668 P-loop ATPase protein family ASA_0319 PF00381 PTS HPr component phosphorylation site ASA_0321 PF07071 KDGP aldolase ASA_0322 PF03841 L-seryl-tRNA selenium transferase ASA_0323 PF01979 Amidohydrolase family ASA_0329 PF13180 PDZ domain ASA_0330 PF13180 PDZ domain ASA_0330 PF00595 PDZ domain ASA_0332 PF03969 AFG1-like ATPase ASA_0333 PF00572 Ribosomal protein L13 ASA_0334 PF00380 Ribosomal protein S9/S16 ASA_0335 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ASA_0335 PF00355 Rieske [2Fe-2S] domain ASA_0336 PF00033 Cytochrome b/b6/petB ASA_0336 PF00032 Cytochrome b(C-terminal)/b6/petD ASA_0337 PF02167 Cytochrome C1 family ASA_0338 PF02798 Glutathione S-transferase, N-terminal domain ASA_0338 PF00043 Glutathione S-transferase, C-terminal domain ASA_0339 PF04386 Stringent starvation protein B ASA_0340 PF04972 BON domain ASA_0341 PF13580 SIS domain ASA_0342 PF02021 Uncharacterised protein family UPF0102 ASA_0343 PF04348 LppC putative lipoprotein ASA_0344 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASA_0347 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ASA_0348 PF00813 FliP family ASA_0349 PF01313 Bacterial export proteins, family 3 ASA_0350 PF01311 Bacterial export proteins, family 1 ASA_0351 PF01312 FlhB HrpN YscU SpaS Family ASA_0352 PF00771 FHIPEP family ASA_0353 PF00072 Response regulator receiver domain ASA_0353 PF00158 Sigma-54 interaction domain ASA_0353 PF02954 Bacterial regulatory protein, Fis family ASA_0354 PF02049 Flagellar hook-basal body complex protein FliE ASA_0355 PF08345 Flagellar M-ring protein C-terminal ASA_0355 PF01514 Secretory protein of YscJ/FliF family ASA_0356 PF01706 FliG C-terminal domain ASA_0356 PF14841 FliG middle domain ASA_0356 PF14842 FliG N-terminal domain ASA_0358 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASA_0358 PF18269 T3SS EscN ATPase C-terminal domain ASA_0361 PF04316 Anti-sigma-28 factor, FlgM ASA_0363 PF00460 Flagella basal body rod protein ASA_0364 PF00460 Flagella basal body rod protein ASA_0364 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_0366 PF07559 Flagellar basal body protein FlaE ASA_0366 PF00460 Flagella basal body rod protein ASA_0366 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_0367 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_0367 PF00460 Flagella basal body rod protein ASA_0368 PF00460 Flagella basal body rod protein ASA_0368 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_0369 PF02107 Flagellar L-ring protein ASA_0370 PF02119 Flagellar P-ring protein ASA_0372 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_0372 PF00460 Flagella basal body rod protein ASA_0377 PF13276 HTH-like domain ASA_0377 PF00665 Integrase core domain ASA_0377 PF13333 Integrase core domain ASA_0379 PF07196 Flagellin hook IN motif ASA_0379 PF02465 Flagellar hook-associated protein 2 N-terminus ASA_0379 PF07195 Flagellar hook-associated protein 2 C-terminus ASA_0380 PF02561 Flagellar protein FliS ASA_0384 PF04542 Sigma-70 region 2 ASA_0384 PF04545 Sigma-70, region 4 ASA_0385 PF01618 MotA/TolQ/ExbB proton channel family ASA_0386 PF13677 Membrane MotB of proton-channel complex MotA/MotB ASA_0386 PF00691 OmpA family ASA_0387 PF01464 Transglycosylase SLT domain ASA_0387 PF01476 LysM domain ASA_0389 PF02381 MraZ protein, putative antitoxin-like ASA_0390 PF01795 MraW methylase family ASA_0391 PF04999 Cell division protein FtsL ASA_0392 PF00905 Penicillin binding protein transpeptidase domain ASA_0392 PF03717 Penicillin-binding Protein dimerisation domain ASA_0393 PF08245 Mur ligase middle domain ASA_0393 PF01225 Mur ligase family, catalytic domain ASA_0393 PF02875 Mur ligase family, glutamate ligase domain ASA_0394 PF01225 Mur ligase family, catalytic domain ASA_0394 PF08245 Mur ligase middle domain ASA_0394 PF02875 Mur ligase family, glutamate ligase domain ASA_0395 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ASA_0395 PF00953 Glycosyl transferase family 4 ASA_0396 PF02875 Mur ligase family, glutamate ligase domain ASA_0396 PF08245 Mur ligase middle domain ASA_0397 PF01098 Cell cycle protein ASA_0398 PF04101 Glycosyltransferase family 28 C-terminal domain ASA_0398 PF03033 Glycosyltransferase family 28 N-terminal domain ASA_0399 PF02875 Mur ligase family, glutamate ligase domain ASA_0399 PF01225 Mur ligase family, catalytic domain ASA_0399 PF08245 Mur ligase middle domain ASA_0400 PF08478 POTRA domain, FtsQ-type ASA_0400 PF03799 Cell division protein FtsQ ASA_0401 PF02491 SHS2 domain inserted in FTSA ASA_0402 PF00091 Tubulin/FtsZ family, GTPase domain ASA_0402 PF12327 FtsZ family, C-terminal domain ASA_0403 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ASA_0405 PF01043 SecA preprotein cross-linking domain ASA_0405 PF07517 SecA DEAD-like domain ASA_0405 PF07516 SecA Wing and Scaffold domain ASA_0405 PF02810 SEC-C motif ASA_0407 PF00293 NUDIX domain ASA_0408 PF03884 DNA gyrase inhibitor YacG ASA_0409 PF07072 Cell division protein ASA_0410 PF01121 Dephospho-CoA kinase ASA_0411 PF06750 Bacterial Peptidase A24 N-terminal domain ASA_0411 PF01478 Type IV leader peptidase family ASA_0413 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ASA_0413 PF00437 Type II/IV secretion system protein ASA_0414 PF07963 Prokaryotic N-terminal methylation motif ASA_0415 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ASA_0415 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ASA_0417 PF01510 N-acetylmuramoyl-L-alanine amidase ASA_0418 PF00392 Bacterial regulatory proteins, gntR family ASA_0418 PF07729 FCD domain ASA_0419 PF00456 Transketolase, thiamine diphosphate binding domain ASA_0419 PF17831 Pyruvate dehydrogenase E1 component middle domain ASA_0420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASA_0420 PF00364 Biotin-requiring enzyme ASA_0420 PF02817 e3 binding domain ASA_0421 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_0421 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASA_0422 PF05231 MASE1 ASA_0422 PF08448 PAS fold ASA_0422 PF00563 EAL domain ASA_0422 PF00990 Diguanylate cyclase, GGDEF domain ASA_0422 PF13426 PAS domain ASA_0422 PF08447 PAS fold ASA_0424 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0424 PF00672 HAMP domain ASA_0424 PF12729 Four helix bundle sensory module for signal transduction ASA_0427 PF00330 Aconitase family (aconitate hydratase) ASA_0427 PF06434 Aconitate hydratase 2 N-terminus ASA_0427 PF11791 Aconitate B N-terminal domain ASA_0428 PF00563 EAL domain ASA_0428 PF12792 CSS motif domain associated with EAL ASA_0430 PF03466 LysR substrate binding domain ASA_0430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0431 PF03466 LysR substrate binding domain ASA_0432 PF01810 LysE type translocator ASA_0434 PF02492 CobW/HypB/UreG, nucleotide-binding domain ASA_0434 PF07683 Cobalamin synthesis protein cobW C-terminal domain ASA_0435 PF07690 Major Facilitator Superfamily ASA_0437 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ASA_0438 PF02152 Dihydroneopterin aldolase ASA_0439 PF02660 Glycerol-3-phosphate acyltransferase ASA_0452 PF00665 Integrase core domain ASA_0452 PF13276 HTH-like domain ASA_0452 PF13333 Integrase core domain ASA_0462 PF01584 CheW-like domain ASA_0462 PF00072 Response regulator receiver domain ASA_0463 PF00106 short chain dehydrogenase ASA_0464 PF08351 Domain of unknown function (DUF1726) ASA_0464 PF05127 Helicase ASA_0464 PF17176 tRNA-binding domain ASA_0464 PF13718 GNAT acetyltransferase 2 ASA_0467 PF00210 Ferritin-like domain ASA_0469 PF02142 MGS-like domain ASA_0472 PF00710 Asparaginase, N-terminal ASA_0472 PF17763 Glutaminase/Asparaginase C-terminal domain ASA_0474 PF00356 Bacterial regulatory proteins, lacI family ASA_0476 PF00480 ROK family ASA_0477 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ASA_0478 PF00232 Glycosyl hydrolase family 1 ASA_0479 PF02378 Phosphotransferase system, EIIC ASA_0480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASA_0481 PF02378 Phosphotransferase system, EIIC ASA_0483 PF00356 Bacterial regulatory proteins, lacI family ASA_0485 PF00128 Alpha amylase, catalytic domain ASA_0485 PF11941 Domain of unknown function (DUF3459) ASA_0486 PF14602 Hexapeptide repeat of succinyl-transferase ASA_0486 PF12464 Maltose acetyltransferase ASA_0488 PF03553 Na+/H+ antiporter family ASA_0496 PF00534 Glycosyl transferases group 1 ASA_0496 PF08323 Starch synthase catalytic domain ASA_0497 PF00483 Nucleotidyl transferase ASA_0498 PF08468 Methyltransferase small domain N-terminal ASA_0498 PF05175 Methyltransferase small domain ASA_0499 PF00701 Dihydrodipicolinate synthetase family ASA_0500 PF00360 Phytochrome region ASA_0500 PF01590 GAF domain ASA_0500 PF00563 EAL domain ASA_0500 PF00990 Diguanylate cyclase, GGDEF domain ASA_0502 PF13419 Haloacid dehalogenase-like hydrolase ASA_0503 PF17209 Hfq protein ASA_0504 PF04403 Paraquat-inducible protein A ASA_0505 PF02470 MlaD protein ASA_0506 PF03886 ABC-type transport auxiliary lipoprotein component ASA_0507 PF00691 OmpA family ASA_0507 PF01389 OmpA-like transmembrane domain ASA_0509 PF00657 GDSL-like Lipase/Acylhydrolase ASA_0510 PF04076 Bacterial OB fold (BOF) protein ASA_0511 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ASA_0511 PF01464 Transglycosylase SLT domain ASA_0512 PF04362 Bacterial Fe(2+) trafficking ASA_0513 PF00633 Helix-hairpin-helix motif ASA_0513 PF00730 HhH-GPD superfamily base excision DNA repair protein ASA_0513 PF14815 NUDIX domain ASA_0513 PF10576 Iron-sulfur binding domain of endonuclease III ASA_0514 PF16537 Type II secretion system protein B ASA_0515 PF01471 Putative peptidoglycan binding domain ASA_0515 PF13401 AAA domain ASA_0516 PF12627 Probable RNA and SrmB- binding site of polymerase A ASA_0516 PF01966 HD domain ASA_0516 PF01743 Poly A polymerase head domain ASA_0517 PF01384 Phosphate transporter family ASA_0518 PF01865 Protein of unknown function DUF47 ASA_0521 PF03279 Bacterial lipid A biosynthesis acyltransferase ASA_0522 PF00294 pfkB family carbohydrate kinase ASA_0522 PF01467 Cytidylyltransferase-like ASA_0523 PF02321 Outer membrane efflux protein ASA_0524 PF13358 DDE superfamily endonuclease ASA_0524 PF13592 Winged helix-turn helix ASA_0525 PF00293 NUDIX domain ASA_0526 PF06853 Protein of unknown function (DUF1249) ASA_0527 PF00149 Calcineurin-like phosphoesterase ASA_0528 PF05728 Uncharacterised protein family (UPF0227) ASA_0529 PF00293 NUDIX domain ASA_0531 PF00204 DNA gyrase B ASA_0531 PF00986 DNA gyrase B subunit, carboxyl terminus ASA_0531 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_0531 PF01751 Toprim domain ASA_0532 PF03989 DNA gyrase C-terminal domain, beta-propeller ASA_0532 PF00521 DNA gyrase/topoisomerase IV, subunit A ASA_0539 PF00226 DnaJ domain ASA_0539 PF01556 DnaJ C terminal domain ASA_0539 PF00684 DnaJ central domain ASA_0541 PF07681 DoxX ASA_0542 PF00085 Thioredoxin ASA_0546 PF01553 Acyltransferase ASA_0547 PF04012 PspA/IM30 family ASA_0550 PF01541 GIY-YIG catalytic domain ASA_0552 PF00892 EamA-like transporter family ASA_0553 PF03167 Uracil DNA glycosylase superfamily ASA_0555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0555 PF03466 LysR substrate binding domain ASA_0556 PF00950 ABC 3 transport family ASA_0557 PF00005 ABC transporter ASA_0558 PF01297 Zinc-uptake complex component A periplasmic ASA_0562 PF01476 LysM domain ASA_0562 PF08525 Opacity-associated protein A N-terminal motif ASA_0562 PF01551 Peptidase family M23 ASA_0563 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASA_0564 PF04222 Protein of unknown function (DUF416) ASA_0567 PF02028 BCCT, betaine/carnitine/choline family transporter ASA_0568 PF00488 MutS domain V ASA_0568 PF05188 MutS domain II ASA_0568 PF01624 MutS domain I ASA_0568 PF05190 MutS family domain IV ASA_0568 PF05192 MutS domain III ASA_0570 PF06953 Arsenical resistance operon trans-acting repressor ArsD ASA_0571 PF02374 Anion-transporting ATPase ASA_0572 PF01758 Sodium Bile acid symporter family ASA_0573 PF03960 ArsC family ASA_0576 PF00311 Phosphoenolpyruvate carboxylase ASA_0577 PF01546 Peptidase family M20/M25/M40 ASA_0577 PF07687 Peptidase dimerisation domain ASA_0578 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASA_0578 PF02774 Semialdehyde dehydrogenase, dimerisation domain ASA_0579 PF00696 Amino acid kinase family ASA_0580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASA_0580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASA_0581 PF00764 Arginosuccinate synthase ASA_0582 PF14698 Argininosuccinate lyase C-terminal ASA_0582 PF00206 Lyase ASA_0583 PF03466 LysR substrate binding domain ASA_0583 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0585 PF14552 Tautomerase enzyme ASA_0591 PF12464 Maltose acetyltransferase ASA_0591 PF14602 Hexapeptide repeat of succinyl-transferase ASA_0592 PF13194 Domain of unknown function (DUF4010) ASA_0595 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0596 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0597 PF00005 ABC transporter ASA_0597 PF12857 TOBE-like domain ASA_0598 PF03466 LysR substrate binding domain ASA_0598 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0599 PF00291 Pyridoxal-phosphate dependent enzyme ASA_0600 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0601 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0602 PF00005 ABC transporter ASA_0603 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_0604 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ASA_0604 PF18416 N-acetylglucosamine binding protein domain 2 ASA_0605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0605 PF17200 Single Cache domain 2 ASA_0605 PF00672 HAMP domain ASA_0614 PF00535 Glycosyl transferase family 2 ASA_0620 PF11230 Protein of unknown function (DUF3029) ASA_0621 PF04055 Radical SAM superfamily ASA_0623 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0623 PF03466 LysR substrate binding domain ASA_0624 PF00155 Aminotransferase class I and II ASA_0625 PF02583 Metal-sensitive transcriptional repressor ASA_0628 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ASA_0628 PF11852 Domain of unknown function (DUF3372) ASA_0628 PF03714 Bacterial pullanase-associated domain ASA_0628 PF18494 Pullulanase Ins domain ASA_0628 PF17967 Pullulanase N2 domain ASA_0629 PF00403 Heavy-metal-associated domain ASA_0630 PF08534 Redoxin ASA_0632 PF00270 DEAD/DEAH box helicase ASA_0632 PF00271 Helicase conserved C-terminal domain ASA_0635 PF03372 Endonuclease/Exonuclease/phosphatase family ASA_0636 PF08447 PAS fold ASA_0636 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0639 PF06062 Uncharacterised protein family (UPF0231) ASA_0640 PF05651 Putative sugar diacid recognition ASA_0640 PF13556 PucR C-terminal helix-turn-helix domain ASA_0640 PF17853 GGDEF-like domain ASA_0641 PF02447 GntP family permease ASA_0641 PF02447 GntP family permease ASA_0642 PF02595 Glycerate kinase family ASA_0644 PF00255 Glutathione peroxidase ASA_0645 PF03466 LysR substrate binding domain ASA_0645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0646 PF01773 Na+ dependent nucleoside transporter N-terminus ASA_0646 PF07662 Na+ dependent nucleoside transporter C-terminus ASA_0646 PF07670 Nucleoside recognition ASA_0647 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ASA_0647 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ASA_0648 PF00472 RF-1 domain ASA_0649 PF00543 Nitrogen regulatory protein P-II ASA_0650 PF13416 Bacterial extracellular solute-binding protein ASA_0652 PF08402 TOBE domain ASA_0652 PF00005 ABC transporter ASA_0653 PF04261 Dyp-type peroxidase family ASA_0654 PF02863 Arginine repressor, C-terminal domain ASA_0654 PF01316 Arginine repressor, DNA binding domain ASA_0655 PF00005 ABC transporter ASA_0656 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_0657 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0658 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0659 PF00056 lactate/malate dehydrogenase, NAD binding domain ASA_0659 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASA_0660 PF08238 Sel1 repeat ASA_0661 PF00970 Oxidoreductase FAD-binding domain ASA_0661 PF00175 Oxidoreductase NAD-binding domain ASA_0661 PF00042 Globin ASA_0662 PF02082 Transcriptional regulator ASA_0663 PF00571 CBS domain ASA_0663 PF03471 Transporter associated domain ASA_0663 PF01595 Cyclin M transmembrane N-terminal domain ASA_0664 PF01578 Cytochrome C assembly protein ASA_0665 PF02881 SRP54-type protein, helical bundle domain ASA_0665 PF02978 Signal peptide binding domain ASA_0665 PF00448 SRP54-type protein, GTPase domain ASA_0666 PF00886 Ribosomal protein S16 ASA_0667 PF05239 PRC-barrel domain ASA_0667 PF01782 RimM N-terminal domain ASA_0668 PF01746 tRNA (Guanine-1)-methyltransferase ASA_0669 PF01245 Ribosomal protein L19 ASA_0671 PF02976 DNA mismatch repair enzyme MutH ASA_0673 PF00293 NUDIX domain ASA_0674 PF05524 PEP-utilising enzyme, N-terminal ASA_0674 PF01590 GAF domain ASA_0674 PF02896 PEP-utilising enzyme, TIM barrel domain ASA_0674 PF00391 PEP-utilising enzyme, mobile domain ASA_0675 PF01790 Prolipoprotein diacylglyceryl transferase ASA_0676 PF00303 Thymidylate synthase ASA_0677 PF06965 Na+/H+ antiporter 1 ASA_0679 PF03466 LysR substrate binding domain ASA_0679 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0680 PF01022 Bacterial regulatory protein, arsR family ASA_0681 PF01649 Ribosomal protein S20 ASA_0682 PF03023 Lipid II flippase MurJ ASA_0683 PF01687 Riboflavin kinase ASA_0683 PF06574 FAD synthetase ASA_0684 PF06827 Zinc finger found in FPG and IleRS ASA_0684 PF00133 tRNA synthetases class I (I, L, M and V) ASA_0684 PF08264 Anticodon-binding domain of tRNA ASA_0685 PF01252 Signal peptidase (SPase) II ASA_0686 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASA_0687 PF02401 LytB protein ASA_0688 PF14245 Type IV pilin PilA ASA_0688 PF07963 Prokaryotic N-terminal methylation motif ASA_0692 PF05567 Neisseria PilC beta-propeller domain ASA_0694 PF02540 NAD synthase ASA_0694 PF00795 Carbon-nitrogen hydrolase ASA_0695 PF00543 Nitrogen regulatory protein P-II ASA_0697 PF02664 S-Ribosylhomocysteinase (LuxS) ASA_0698 PF00990 Diguanylate cyclase, GGDEF domain ASA_0699 PF00575 S1 RNA binding domain ASA_0699 PF00773 RNB domain ASA_0699 PF17876 Cold shock domain ASA_0699 PF08461 Ribonuclease R winged-helix domain ASA_0699 PF08206 Ribonuclease B OB domain ASA_0700 PF00588 SpoU rRNA Methylase family ASA_0700 PF08032 RNA 2'-O ribose methyltransferase substrate binding ASA_0702 PF13673 Acetyltransferase (GNAT) domain ASA_0706 PF01566 Natural resistance-associated macrophage protein ASA_0707 PF01250 Ribosomal protein S6 ASA_0708 PF01084 Ribosomal protein S18 ASA_0709 PF03948 Ribosomal protein L9, C-terminal domain ASA_0709 PF01281 Ribosomal protein L9, N-terminal domain ASA_0710 PF00970 Oxidoreductase FAD-binding domain ASA_0710 PF00175 Oxidoreductase NAD-binding domain ASA_0714 PF00107 Zinc-binding dehydrogenase ASA_0714 PF08240 Alcohol dehydrogenase GroES-like domain ASA_0715 PF09335 SNARE associated Golgi protein ASA_0716 PF00675 Insulinase (Peptidase family M16) ASA_0716 PF05193 Peptidase M16 inactive domain ASA_0717 PF04262 Glutamate-cysteine ligase ASA_0719 PF00501 AMP-binding enzyme ASA_0721 PF00583 Acetyltransferase (GNAT) family ASA_0721 PF13673 Acetyltransferase (GNAT) domain ASA_0723 PF07728 AAA domain (dynein-related subfamily) ASA_0723 PF17868 AAA lid domain ASA_0723 PF12592 Protein of unknown function (DUF3763) ASA_0724 PF05762 VWA domain containing CoxE-like protein ASA_0726 PF01037 Lrp/AsnC ligand binding domain ASA_0728 PF00990 Diguanylate cyclase, GGDEF domain ASA_0728 PF00072 Response regulator receiver domain ASA_0729 PF16658 Class II release factor RF3, C-terminal domain ASA_0729 PF03144 Elongation factor Tu domain 2 ASA_0729 PF00009 Elongation factor Tu GTP binding domain ASA_0731 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ASA_0733 PF03129 Anticodon binding domain ASA_0733 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASA_0733 PF04073 Aminoacyl-tRNA editing domain ASA_0734 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0734 PF00672 HAMP domain ASA_0735 PF01330 RuvA N terminal domain ASA_0735 PF07499 RuvA, C-terminal domain ASA_0736 PF05491 RuvB C-terminal winged helix domain ASA_0736 PF05496 Holliday junction DNA helicase RuvB P-loop domain ASA_0736 PF17864 RuvB AAA lid domain ASA_0737 PF01654 Cytochrome bd terminal oxidase subunit I ASA_0738 PF02322 Cytochrome bd terminal oxidase subunit II ASA_0739 PF08173 Membrane bound YbgT-like protein ASA_0740 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ASA_0741 PF03061 Thioesterase superfamily ASA_0742 PF01618 MotA/TolQ/ExbB proton channel family ASA_0743 PF02472 Biopolymer transport protein ExbD/TolR ASA_0745 PF07676 WD40-like Beta Propeller Repeat ASA_0745 PF04052 TolB amino-terminal domain ASA_0746 PF00691 OmpA family ASA_0747 PF16331 TolA binding protein trimerisation ASA_0747 PF13174 Tetratricopeptide repeat ASA_0756 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0756 PF00672 HAMP domain ASA_0757 PF02445 Quinolinate synthetase A protein ASA_0758 PF01263 Aldose 1-epimerase ASA_0759 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASA_0759 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASA_0760 PF02446 4-alpha-glucanotransferase ASA_0761 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ASA_0761 PF00128 Alpha amylase, catalytic domain ASA_0761 PF02806 Alpha amylase, C-terminal all-beta domain ASA_0762 PF00128 Alpha amylase, catalytic domain ASA_0762 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ASA_0763 PF01641 SelR domain ASA_0765 PF07885 Ion channel ASA_0765 PF00027 Cyclic nucleotide-binding domain ASA_0766 PF08239 Bacterial SH3 domain ASA_0767 PF14850 DNA-binding domain of Proline dehydrogenase ASA_0767 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ASA_0767 PF00171 Aldehyde dehydrogenase family ASA_0767 PF01619 Proline dehydrogenase ASA_0768 PF00293 NUDIX domain ASA_0768 PF09297 NADH pyrophosphatase zinc ribbon domain ASA_0769 PF01208 Uroporphyrinogen decarboxylase (URO-D) ASA_0770 PF00719 Inorganic pyrophosphatase ASA_0771 PF01225 Mur ligase family, catalytic domain ASA_0771 PF02875 Mur ligase family, glutamate ligase domain ASA_0771 PF08245 Mur ligase middle domain ASA_0772 PF02441 Flavoprotein ASA_0773 PF00440 Bacterial regulatory proteins, tetR family ASA_0774 PF00156 Phosphoribosyl transferase domain ASA_0775 PF00005 ABC transporter ASA_0776 PF01061 ABC-2 type transporter ASA_0778 PF02569 Pantoate-beta-alanine ligase ASA_0779 PF02548 Ketopantoate hydroxymethyltransferase ASA_0780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ASA_0781 PF12627 Probable RNA and SrmB- binding site of polymerase A ASA_0781 PF01743 Poly A polymerase head domain ASA_0781 PF12626 Polymerase A arginine-rich C-terminus ASA_0782 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASA_0783 PF01258 Prokaryotic dksA/traR C4-type zinc finger ASA_0784 PF17746 SfsA N-terminal OB domain ASA_0784 PF03749 Sugar fermentation stimulation protein RE domain ASA_0786 PF00270 DEAD/DEAH box helicase ASA_0786 PF04408 Helicase associated domain (HA2) ASA_0786 PF08482 ATP-dependent helicase C-terminal ASA_0786 PF00271 Helicase conserved C-terminal domain ASA_0787 PF14814 Bifunctional transglycosylase second domain ASA_0787 PF00905 Penicillin binding protein transpeptidase domain ASA_0787 PF00912 Transglycosylase ASA_0788 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ASA_0789 PF00893 Small Multidrug Resistance protein ASA_0790 PF00893 Small Multidrug Resistance protein ASA_0791 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0791 PF03466 LysR substrate binding domain ASA_0792 PF11849 Domain of unknown function (DUF3369) ASA_0794 PF01569 PAP2 superfamily ASA_0797 PF00202 Aminotransferase class-III ASA_0798 PF00654 Voltage gated chloride channel ASA_0800 PF01521 Iron-sulphur cluster biosynthesis ASA_0806 PF01810 LysE type translocator ASA_0807 PF02954 Bacterial regulatory protein, Fis family ASA_0808 PF01207 Dihydrouridine synthase (Dus) ASA_0809 PF02321 Outer membrane efflux protein ASA_0810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_0816 PF00072 Response regulator receiver domain ASA_0817 PF00854 POT family ASA_0818 PF00483 Nucleotidyl transferase ASA_0820 PF00459 Inositol monophosphatase family ASA_0821 PF03795 YCII-related domain ASA_0822 PF04279 Intracellular septation protein A ASA_0823 PF00282 Pyridoxal-dependent decarboxylase conserved domain ASA_0824 PF03006 Haemolysin-III related ASA_0825 PF06826 Predicted Permease Membrane Region ASA_0825 PF02080 TrkA-C domain ASA_0827 PF00072 Response regulator receiver domain ASA_0827 PF01584 CheW-like domain ASA_0828 PF13472 GDSL-like Lipase/Acylhydrolase family ASA_0829 PF00005 ABC transporter ASA_0831 PF08338 Domain of unknown function (DUF1731) ASA_0831 PF01370 NAD dependent epimerase/dehydratase family ASA_0832 PF12792 CSS motif domain associated with EAL ASA_0832 PF00563 EAL domain ASA_0835 PF02390 Putative methyltransferase ASA_0836 PF04320 Protein with unknown function (DUF469) ASA_0837 PF04960 Glutaminase ASA_0838 PF00581 Rhodanese-like domain ASA_0839 PF06004 Bacterial protein of unknown function (DUF903) ASA_0840 PF00005 ABC transporter ASA_0840 PF00664 ABC transporter transmembrane region ASA_0841 PF00561 alpha/beta hydrolase fold ASA_0843 PF00171 Aldehyde dehydrogenase family ASA_0849 PF00801 PKD domain ASA_0849 PF05547 Immune inhibitor A peptidase M6 ASA_0850 PF06877 Regulator of ribonuclease activity B ASA_0851 PF00563 EAL domain ASA_0851 PF00990 Diguanylate cyclase, GGDEF domain ASA_0851 PF03707 Bacterial signalling protein N terminal repeat ASA_0855 PF09905 DNA-binding protein VF530 ASA_0856 PF02666 Phosphatidylserine decarboxylase ASA_0857 PF03193 RsgA GTPase ASA_0858 PF00929 Exonuclease ASA_0864 PF00313 'Cold-shock' DNA-binding domain ASA_0866 PF00672 HAMP domain ASA_0866 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0867 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASA_0873 PF06483 Chitinase C ASA_0873 PF00704 Glycosyl hydrolases family 18 ASA_0876 PF02472 Biopolymer transport protein ExbD/TolR ASA_0877 PF01618 MotA/TolQ/ExbB proton channel family ASA_0878 PF01618 MotA/TolQ/ExbB proton channel family ASA_0880 PF00593 TonB dependent receptor ASA_0880 PF07715 TonB-dependent Receptor Plug Domain ASA_0882 PF12911 N-terminal TM domain of oligopeptide transport permease C ASA_0882 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0883 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_0884 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASA_0884 PF00005 ABC transporter ASA_0885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASA_0885 PF00005 ABC transporter ASA_0887 PF07687 Peptidase dimerisation domain ASA_0887 PF01546 Peptidase family M20/M25/M40 ASA_0890 PF00156 Phosphoribosyl transferase domain ASA_0892 PF07417 Sigma factor-binding transcriptional regulator Crl ASA_0893 PF00696 Amino acid kinase family ASA_0893 PF01472 PUA domain ASA_0894 PF00171 Aldehyde dehydrogenase family ASA_0896 PF00582 Universal stress protein family ASA_0900 PF00294 pfkB family carbohydrate kinase ASA_0901 PF04227 Indigoidine synthase A like protein ASA_0902 PF00194 Eukaryotic-type carbonic anhydrase ASA_0903 PF03150 Di-haem cytochrome c peroxidase ASA_0903 PF00034 Cytochrome c ASA_0910 PF00550 Phosphopantetheine attachment site ASA_0911 PF00550 Phosphopantetheine attachment site ASA_0913 PF00501 AMP-binding enzyme ASA_0913 PF13193 AMP-binding enzyme C-terminal domain ASA_0914 PF07977 FabA-like domain ASA_0916 PF00221 Aromatic amino acid lyase ASA_0922 PF02801 Beta-ketoacyl synthase, C-terminal domain ASA_0922 PF00109 Beta-ketoacyl synthase, N-terminal domain ASA_0925 PF02801 Beta-ketoacyl synthase, C-terminal domain ASA_0925 PF00109 Beta-ketoacyl synthase, N-terminal domain ASA_0927 PF00994 Probable molybdopterin binding domain ASA_0929 PF06738 Putative threonine/serine exporter ASA_0931 PF12821 Threonine/Serine exporter, ThrE ASA_0932 PF00186 Dihydrofolate reductase ASA_0933 PF00005 ABC transporter ASA_0933 PF00571 CBS domain ASA_0934 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ASA_0936 PF01507 Phosphoadenosine phosphosulfate reductase family ASA_0939 PF02567 Phenazine biosynthesis-like protein ASA_0940 PF01336 OB-fold nucleic acid binding domain ASA_0940 PF00152 tRNA synthetases class II (D, K and N) ASA_0942 PF02743 Cache domain ASA_0942 PF00672 HAMP domain ASA_0942 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_0943 PF03616 Sodium/glutamate symporter ASA_0944 PF17763 Glutaminase/Asparaginase C-terminal domain ASA_0944 PF00710 Asparaginase, N-terminal ASA_0945 PF07023 Protein of unknown function (DUF1315) ASA_0946 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASA_0946 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASA_0949 PF01343 Peptidase family S49 ASA_0950 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_0950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ASA_0951 PF00881 Nitroreductase family ASA_0953 PF12464 Maltose acetyltransferase ASA_0953 PF14602 Hexapeptide repeat of succinyl-transferase ASA_0954 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASA_0954 PF01842 ACT domain ASA_0954 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASA_0955 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ASA_0956 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ASA_0959 PF08240 Alcohol dehydrogenase GroES-like domain ASA_0959 PF00107 Zinc-binding dehydrogenase ASA_0960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_0960 PF03466 LysR substrate binding domain ASA_0961 PF02378 Phosphotransferase system, EIIC ASA_0961 PF00367 phosphotransferase system, EIIB ASA_0961 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASA_0962 PF00474 Sodium:solute symporter family ASA_0963 PF06196 Protein of unknown function (DUF997) ASA_0964 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASA_0964 PF00289 Biotin carboxylase, N-terminal domain ASA_0964 PF02785 Biotin carboxylase C-terminal domain ASA_0965 PF00364 Biotin-requiring enzyme ASA_0966 PF01220 Dehydroquinase class II ASA_0967 PF00501 AMP-binding enzyme ASA_0967 PF16177 Acetyl-coenzyme A synthetase N-terminus ASA_0967 PF13193 AMP-binding enzyme C-terminal domain ASA_0969 PF00563 EAL domain ASA_0969 PF03707 Bacterial signalling protein N terminal repeat ASA_0969 PF00990 Diguanylate cyclase, GGDEF domain ASA_0973 PF02613 Nitrate reductase delta subunit ASA_0975 PF00464 Serine hydroxymethyltransferase ASA_0978 PF03477 ATP cone domain ASA_0979 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASA_0979 PF01872 RibD C-terminal domain ASA_0980 PF00677 Lumazine binding domain ASA_0981 PF00925 GTP cyclohydrolase II ASA_0981 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ASA_0982 PF00885 6,7-dimethyl-8-ribityllumazine synthase ASA_0983 PF01029 NusB family ASA_0984 PF00586 AIR synthase related protein, N-terminal domain ASA_0984 PF02769 AIR synthase related protein, C-terminal domain ASA_0985 PF04608 Phosphatidylglycerophosphatase A ASA_0986 PF00005 ABC transporter ASA_0986 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASA_0987 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_0989 PF00528 Binding-protein-dependent transport system inner membrane component ASA_0989 PF12911 N-terminal TM domain of oligopeptide transport permease C ASA_0990 PF02780 Transketolase, C-terminal domain ASA_0990 PF02779 Transketolase, pyrimidine binding domain ASA_0990 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ASA_0991 PF00348 Polyprenyl synthetase ASA_0992 PF02609 Exonuclease VII small subunit ASA_0993 PF01618 MotA/TolQ/ExbB proton channel family ASA_0997 PF03449 Transcription elongation factor, N-terminal ASA_0997 PF01272 Transcription elongation factor, GreA/GreB, C-term ASA_0999 PF01985 CRS1 / YhbY (CRM) domain ASA_1000 PF01728 FtsJ-like methyltransferase ASA_1001 PF06480 FtsH Extracellular ASA_1001 PF17862 AAA+ lid domain ASA_1001 PF00004 ATPase family associated with various cellular activities (AAA) ASA_1001 PF01434 Peptidase family M41 ASA_1002 PF00809 Pterin binding enzyme ASA_1003 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASA_1003 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASA_1003 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASA_1003 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASA_1004 PF00121 Triosephosphate isomerase ASA_1005 PF03840 Preprotein translocase SecG subunit ASA_1008 PF02576 RimP N-terminal domain ASA_1008 PF17384 RimP C-terminal SH3 domain ASA_1009 PF00575 S1 RNA binding domain ASA_1009 PF08529 NusA N-terminal domain ASA_1009 PF13184 NusA-like KH domain ASA_1010 PF11987 Translation-initiation factor 2 ASA_1010 PF04760 Translation initiation factor IF-2, N-terminal region ASA_1010 PF00009 Elongation factor Tu GTP binding domain ASA_1010 PF08364 Bacterial translation initiation factor IF-2 associated region ASA_1011 PF02033 Ribosome-binding factor A ASA_1012 PF09157 Pseudouridine synthase II TruB, C-terminal ASA_1012 PF16198 tRNA pseudouridylate synthase B C-terminal domain ASA_1012 PF01509 TruB family pseudouridylate synthase (N terminal domain) ASA_1013 PF00312 Ribosomal protein S15 ASA_1014 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ASA_1014 PF00575 S1 RNA binding domain ASA_1014 PF03725 3' exoribonuclease family, domain 2 ASA_1014 PF01138 3' exoribonuclease family, domain 1 ASA_1014 PF00013 KH domain ASA_1016 PF00990 Diguanylate cyclase, GGDEF domain ASA_1017 PF02635 DsrE/DsrF-like family ASA_1018 PF06476 Protein of unknown function (DUF1090) ASA_1020 PF03575 Peptidase family S51 ASA_1023 PF13358 DDE superfamily endonuclease ASA_1023 PF13592 Winged helix-turn helix ASA_1025 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ASA_1027 PF17969 L,D-transpeptidase C-terminal domain ASA_1027 PF03734 L,D-transpeptidase catalytic domain ASA_1029 PF01523 Putative modulator of DNA gyrase ASA_1030 PF01523 Putative modulator of DNA gyrase ASA_1031 PF00258 Flavodoxin ASA_1032 PF00589 Phage integrase family ASA_1032 PF02899 Phage integrase, N-terminal SAM-like domain ASA_1033 PF17158 Membrane-associated sensor, integral membrane domain ASA_1033 PF00990 Diguanylate cyclase, GGDEF domain ASA_1034 PF01741 Large-conductance mechanosensitive channel, MscL ASA_1036 PF01368 DHH family ASA_1036 PF17768 RecJ OB domain ASA_1036 PF02272 DHHA1 domain ASA_1039 PF02508 Rnf-Nqr subunit, membrane protein ASA_1040 PF06821 Serine hydrolase ASA_1043 PF00665 Integrase core domain ASA_1047 PF00665 Integrase core domain ASA_1048 PF01695 IstB-like ATP binding protein ASA_1054 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ASA_1054 PF04055 Radical SAM superfamily ASA_1056 PF03099 Biotin/lipoate A/B protein ligase family ASA_1057 PF04359 Protein of unknown function (DUF493) ASA_1058 PF00768 D-alanyl-D-alanine carboxypeptidase ASA_1058 PF07943 Penicillin-binding protein 5, C-terminal domain ASA_1059 PF03330 Lytic transglycolase ASA_1059 PF05036 Sporulation related domain ASA_1061 PF01098 Cell cycle protein ASA_1062 PF00905 Penicillin binding protein transpeptidase domain ASA_1062 PF03717 Penicillin-binding Protein dimerisation domain ASA_1063 PF02590 Predicted SPOUT methyltransferase ASA_1065 PF01467 Cytidylyltransferase-like ASA_1068 PF13603 Leucyl-tRNA synthetase, Domain 2 ASA_1068 PF00133 tRNA synthetases class I (I, L, M and V) ASA_1068 PF08264 Anticodon-binding domain of tRNA ASA_1069 PF07295 Zinc-ribbon containing domain ASA_1070 PF00795 Carbon-nitrogen hydrolase ASA_1071 PF00571 CBS domain ASA_1071 PF03471 Transporter associated domain ASA_1072 PF02130 Uncharacterized protein family UPF0054 ASA_1073 PF02562 PhoH-like protein ASA_1074 PF04055 Radical SAM superfamily ASA_1074 PF01938 TRAM domain ASA_1074 PF00919 Uncharacterized protein family UPF0004 ASA_1075 PF01494 FAD binding domain ASA_1076 PF00313 'Cold-shock' DNA-binding domain ASA_1077 PF05230 MASE2 domain ASA_1077 PF00990 Diguanylate cyclase, GGDEF domain ASA_1078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_1078 PF03466 LysR substrate binding domain ASA_1080 PF13419 Haloacid dehalogenase-like hydrolase ASA_1084 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASA_1084 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASA_1086 PF08207 Elongation factor P (EF-P) KOW-like domain ASA_1086 PF01132 Elongation factor P (EF-P) OB domain ASA_1086 PF09285 Elongation factor P, C-terminal ASA_1088 PF00478 IMP dehydrogenase / GMP reductase domain ASA_1090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1090 PF08521 Two-component sensor kinase N-terminal ASA_1090 PF00512 His Kinase A (phospho-acceptor) domain ASA_1091 PF00486 Transcriptional regulatory protein, C terminal ASA_1091 PF00072 Response regulator receiver domain ASA_1095 PF00501 AMP-binding enzyme ASA_1098 PF06224 Winged helix DNA-binding domain ASA_1102 PF02313 Fumarate reductase subunit D ASA_1103 PF02300 Fumarate reductase subunit C ASA_1104 PF13085 2Fe-2S iron-sulfur cluster binding domain ASA_1104 PF13183 4Fe-4S dicluster domain ASA_1105 PF02910 Fumarate reductase flavoprotein C-term ASA_1105 PF00890 FAD binding domain ASA_1106 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_1106 PF02743 Cache domain ASA_1106 PF00672 HAMP domain ASA_1107 PF03009 Glycerophosphoryl diester phosphodiesterase family ASA_1108 PF00924 Mechanosensitive ion channel ASA_1108 PF12795 Mechanosensitive ion channel porin domain ASA_1108 PF12794 Mechanosensitive ion channel inner membrane domain 1 ASA_1109 PF13592 Winged helix-turn helix ASA_1109 PF13358 DDE superfamily endonuclease ASA_1111 PF01551 Peptidase family M23 ASA_1111 PF01476 LysM domain ASA_1111 PF08525 Opacity-associated protein A N-terminal motif ASA_1114 PF03466 LysR substrate binding domain ASA_1114 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_1118 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_1118 PF03466 LysR substrate binding domain ASA_1119 PF00905 Penicillin binding protein transpeptidase domain ASA_1119 PF17092 Penicillin-binding protein OB-like domain ASA_1119 PF00912 Transglycosylase ASA_1124 PF07660 Secretin and TonB N terminus short domain ASA_1124 PF00263 Bacterial type II and III secretion system protein ASA_1124 PF11741 AMIN domain ASA_1124 PF03958 Bacterial type II/III secretion system short domain ASA_1125 PF01202 Shikimate kinase ASA_1126 PF01761 3-dehydroquinate synthase ASA_1128 PF02086 D12 class N6 adenine-specific DNA methyltransferase ASA_1129 PF00834 Ribulose-phosphate 3 epimerase family ASA_1130 PF13419 Haloacid dehalogenase-like hydrolase ASA_1131 PF00579 tRNA synthetases class I (W and Y) ASA_1133 PF00117 Glutamine amidotransferase class-I ASA_1134 PF00202 Aminotransferase class-III ASA_1135 PF04958 Arginine N-succinyltransferase beta subunit ASA_1136 PF00171 Aldehyde dehydrogenase family ASA_1138 PF13419 Haloacid dehalogenase-like hydrolase ASA_1139 PF07690 Major Facilitator Superfamily ASA_1140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASA_1140 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ASA_1140 PF10371 Domain of unknown function ASA_1140 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ASA_1140 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ASA_1141 PF07690 Major Facilitator Superfamily ASA_1142 PF12848 ABC transporter ASA_1142 PF00005 ABC transporter ASA_1144 PF16657 Maltogenic Amylase, C-terminal domain ASA_1144 PF00128 Alpha amylase, catalytic domain ASA_1146 PF00012 Hsp70 protein ASA_1149 PF07859 alpha/beta hydrolase fold ASA_1152 PF01048 Phosphorylase superfamily ASA_1153 PF04973 Nicotinamide mononucleotide transporter ASA_1154 PF03600 Citrate transporter ASA_1154 PF02080 TrkA-C domain ASA_1165 PF00665 Integrase core domain ASA_1165 PF13333 Integrase core domain ASA_1165 PF13276 HTH-like domain ASA_1167 PF06071 Protein of unknown function (DUF933) ASA_1167 PF01926 50S ribosome-binding GTPase ASA_1168 PF01195 Peptidyl-tRNA hydrolase ASA_1169 PF02872 5'-nucleotidase, C-terminal domain ASA_1169 PF00149 Calcineurin-like phosphoesterase ASA_1170 PF14572 Phosphoribosyl synthetase-associated domain ASA_1170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ASA_1172 PF00288 GHMP kinases N terminal domain ASA_1172 PF08544 GHMP kinases C terminal ASA_1173 PF03550 Outer membrane lipoprotein LolB ASA_1174 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ASA_1174 PF01488 Shikimate / quinate 5-dehydrogenase ASA_1174 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ASA_1175 PF00472 RF-1 domain ASA_1175 PF03462 PCRF domain ASA_1176 PF13847 Methyltransferase domain ASA_1176 PF17827 PrmC N-terminal domain ASA_1179 PF00793 DAHP synthetase I family ASA_1180 PF00375 Sodium:dicarboxylate symporter family ASA_1181 PF01228 Glycine radical ASA_1182 PF13358 DDE superfamily endonuclease ASA_1182 PF13592 Winged helix-turn helix ASA_1183 PF03167 Uracil DNA glycosylase superfamily ASA_1186 PF00923 Transaldolase/Fructose-6-phosphate aldolase ASA_1187 PF01235 Sodium:alanine symporter family ASA_1188 PF01841 Transglutaminase-like superfamily ASA_1188 PF13559 Domain of unknown function (DUF4129) ASA_1188 PF11992 Domain of unknown function (DUF3488) ASA_1190 PF17863 AAA lid domain ASA_1190 PF07726 ATPase family associated with various cellular activities (AAA) ASA_1191 PF00144 Beta-lactamase ASA_1192 PF07690 Major Facilitator Superfamily ASA_1193 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_1193 PF03466 LysR substrate binding domain ASA_1194 PF03652 Holliday junction resolvase ASA_1195 PF02622 Uncharacterized ACR, COG1678 ASA_1197 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ASA_1197 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ASA_1199 PF04231 Endonuclease I ASA_1200 PF10263 SprT-like family ASA_1200 PF17283 SprT-like zinc ribbon domain ASA_1201 PF00438 S-adenosylmethionine synthetase, N-terminal domain ASA_1201 PF02772 S-adenosylmethionine synthetase, central domain ASA_1201 PF02773 S-adenosylmethionine synthetase, C-terminal domain ASA_1202 PF02779 Transketolase, pyrimidine binding domain ASA_1202 PF02780 Transketolase, C-terminal domain ASA_1202 PF00456 Transketolase, thiamine diphosphate binding domain ASA_1204 PF01042 Endoribonuclease L-PSP ASA_1205 PF03702 Anhydro-N-acetylmuramic acid kinase ASA_1206 PF01551 Peptidase family M23 ASA_1206 PF01476 LysM domain ASA_1206 PF08525 Opacity-associated protein A N-terminal motif ASA_1207 PF00579 tRNA synthetases class I (W and Y) ASA_1210 PF00535 Glycosyl transferase family 2 ASA_1213 PF03734 L,D-transpeptidase catalytic domain ASA_1213 PF01471 Putative peptidoglycan binding domain ASA_1214 PF05951 Bacterial protein of unknown function (DUF882) ASA_1216 PF03458 UPF0126 domain ASA_1218 PF02463 RecF/RecN/SMC N terminal domain ASA_1218 PF06470 SMC proteins Flexible Hinge Domain ASA_1219 PF04354 ZipA, C-terminal FtsZ-binding domain ASA_1220 PF03120 NAD-dependent DNA ligase OB-fold domain ASA_1220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ASA_1220 PF12826 Helix-hairpin-helix motif ASA_1220 PF01653 NAD-dependent DNA ligase adenylation domain ASA_1220 PF00533 BRCA1 C Terminus (BRCT) domain ASA_1222 PF13597 Anaerobic ribonucleoside-triphosphate reductase ASA_1222 PF03477 ATP cone domain ASA_1229 PF00529 HlyD membrane-fusion protein of T1SS ASA_1229 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_1230 PF01047 MarR family ASA_1233 PF03949 Malic enzyme, NAD binding domain ASA_1233 PF00390 Malic enzyme, N-terminal domain ASA_1234 PF00989 PAS fold ASA_1234 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1234 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ASA_1234 PF17203 Single cache domain 3 ASA_1235 PF12431 Transcriptional regulator ASA_1235 PF00072 Response regulator receiver domain ASA_1238 PF00990 Diguanylate cyclase, GGDEF domain ASA_1238 PF07694 5TMR of 5TMR-LYT ASA_1239 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ASA_1240 PF00486 Transcriptional regulatory protein, C terminal ASA_1240 PF00072 Response regulator receiver domain ASA_1241 PF11808 Phosphate regulon sensor protein PhoR ASA_1241 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1241 PF00989 PAS fold ASA_1241 PF00512 His Kinase A (phospho-acceptor) domain ASA_1242 PF12849 PBP superfamily domain ASA_1243 PF01435 Peptidase family M48 ASA_1245 PF00480 ROK family ASA_1246 PF03932 CutC family ASA_1247 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ASA_1247 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASA_1248 PF00005 ABC transporter ASA_1252 PF00293 NUDIX domain ASA_1254 PF00462 Glutaredoxin ASA_1254 PF08534 Redoxin ASA_1255 PF01699 Sodium/calcium exchanger protein ASA_1256 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ASA_1256 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ASA_1257 PF01235 Sodium:alanine symporter family ASA_1259 PF00860 Permease family ASA_1260 PF00072 Response regulator receiver domain ASA_1260 PF00990 Diguanylate cyclase, GGDEF domain ASA_1261 PF10692 Protein of unknown function (DUF2498) ASA_1262 PF01554 MatE ASA_1263 PF12833 Helix-turn-helix domain ASA_1264 PF03949 Malic enzyme, NAD binding domain ASA_1264 PF00390 Malic enzyme, N-terminal domain ASA_1265 PF01389 OmpA-like transmembrane domain ASA_1265 PF00691 OmpA family ASA_1266 PF01389 OmpA-like transmembrane domain ASA_1266 PF00691 OmpA family ASA_1267 PF01389 OmpA-like transmembrane domain ASA_1267 PF00691 OmpA family ASA_1270 PF00209 Sodium:neurotransmitter symporter family ASA_1271 PF01734 Patatin-like phospholipase ASA_1272 PF05230 MASE2 domain ASA_1272 PF00990 Diguanylate cyclase, GGDEF domain ASA_1273 PF13533 Biotin-lipoyl like ASA_1274 PF00873 AcrB/AcrD/AcrF family ASA_1276 PF08497 Radical SAM N-terminal ASA_1276 PF04055 Radical SAM superfamily ASA_1276 PF11842 Domain of unknown function (DUF3362) ASA_1282 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASA_1283 PF02075 Crossover junction endodeoxyribonuclease RuvC ASA_1284 PF00230 Major intrinsic protein ASA_1285 PF01464 Transglycosylase SLT domain ASA_1285 PF10145 Phage-related minor tail protein ASA_1285 PF01551 Peptidase family M23 ASA_1286 PF00128 Alpha amylase, catalytic domain ASA_1287 PF01551 Peptidase family M23 ASA_1290 PF13396 Phospholipase_D-nuclease N-terminal ASA_1290 PF13091 PLD-like domain ASA_1292 PF00551 Formyl transferase ASA_1292 PF01842 ACT domain ASA_1293 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ASA_1296 PF01648 4'-phosphopantetheinyl transferase superfamily ASA_1297 PF00877 NlpC/P60 family ASA_1298 PF05971 RNA methyltransferase ASA_1299 PF01575 MaoC like domain ASA_1301 PF03734 L,D-transpeptidase catalytic domain ASA_1301 PF01476 LysM domain ASA_1301 PF17969 L,D-transpeptidase C-terminal domain ASA_1303 PF08878 Domain of unknown function (DUF1837) ASA_1303 PF14130 Domain of unknown function (DUF4297) ASA_1304 PF13592 Winged helix-turn helix ASA_1304 PF13358 DDE superfamily endonuclease ASA_1309 PF00665 Integrase core domain ASA_1310 PF01695 IstB-like ATP binding protein ASA_1311 PF03527 RHS protein ASA_1311 PF05593 RHS Repeat ASA_1317 PF00440 Bacterial regulatory proteins, tetR family ASA_1318 PF09317 Domain of unknown function (DUF1974) ASA_1318 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ASA_1318 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ASA_1318 PF02770 Acyl-CoA dehydrogenase, middle domain ASA_1319 PF00873 AcrB/AcrD/AcrF family ASA_1321 PF00224 Pyruvate kinase, barrel domain ASA_1321 PF02887 Pyruvate kinase, alpha/beta domain ASA_1322 PF01380 SIS domain ASA_1322 PF01418 Helix-turn-helix domain, rpiR family ASA_1323 PF02685 Glucokinase ASA_1324 PF00989 PAS fold ASA_1324 PF17203 Single cache domain 3 ASA_1324 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ASA_1324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1325 PF00072 Response regulator receiver domain ASA_1325 PF00486 Transcriptional regulatory protein, C terminal ASA_1327 PF00919 Uncharacterized protein family UPF0004 ASA_1327 PF04055 Radical SAM superfamily ASA_1327 PF18693 TRAM domain ASA_1328 PF00072 Response regulator receiver domain ASA_1331 PF02001 Protein of unknown function DUF134 ASA_1334 PF07969 Amidohydrolase family ASA_1336 PF02049 Flagellar hook-basal body complex protein FliE ASA_1337 PF01514 Secretory protein of YscJ/FliF family ASA_1337 PF08345 Flagellar M-ring protein C-terminal ASA_1338 PF14842 FliG N-terminal domain ASA_1338 PF01706 FliG C-terminal domain ASA_1338 PF14841 FliG middle domain ASA_1340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASA_1340 PF18269 T3SS EscN ATPase C-terminal domain ASA_1344 PF02154 Flagellar motor switch protein FliM ASA_1344 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ASA_1345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ASA_1346 PF04347 Flagellar biosynthesis protein, FliO ASA_1347 PF00813 FliP family ASA_1348 PF01313 Bacterial export proteins, family 3 ASA_1349 PF01311 Bacterial export proteins, family 1 ASA_1350 PF01312 FlhB HrpN YscU SpaS Family ASA_1351 PF00771 FHIPEP family ASA_1352 PF00448 SRP54-type protein, GTPase domain ASA_1353 PF10609 NUBPL iron-transfer P-loop NTPase ASA_1354 PF04545 Sigma-70, region 4 ASA_1354 PF04539 Sigma-70 region 3 ASA_1354 PF04542 Sigma-70 region 2 ASA_1355 PF00072 Response regulator receiver domain ASA_1356 PF04344 Chemotaxis phosphatase, CheZ ASA_1357 PF01627 Hpt domain ASA_1357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1357 PF02895 Signal transducing histidine kinase, homodimeric domain ASA_1357 PF01584 CheW-like domain ASA_1357 PF07194 P2 response regulator binding domain ASA_1358 PF01339 CheB methylesterase ASA_1358 PF00072 Response regulator receiver domain ASA_1359 PF01618 MotA/TolQ/ExbB proton channel family ASA_1360 PF00691 OmpA family ASA_1360 PF13677 Membrane MotB of proton-channel complex MotA/MotB ASA_1361 PF13614 AAA domain ASA_1363 PF01584 CheW-like domain ASA_1365 PF00005 ABC transporter ASA_1366 PF03379 CcmB protein ASA_1367 PF01578 Cytochrome C assembly protein ASA_1368 PF04995 Heme exporter protein D (CcmD) ASA_1369 PF03100 CcmE ASA_1370 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ASA_1370 PF01578 Cytochrome C assembly protein ASA_1371 PF08534 Redoxin ASA_1372 PF03918 Cytochrome C biogenesis protein ASA_1374 PF04333 MlaA lipoprotein ASA_1375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ASA_1375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ASA_1376 PF00462 Glutaredoxin ASA_1377 PF01029 NusB family ASA_1377 PF01189 16S rRNA methyltransferase RsmB/F ASA_1380 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ASA_1380 PF01243 Pyridoxamine 5'-phosphate oxidase ASA_1381 PF00043 Glutathione S-transferase, C-terminal domain ASA_1381 PF13417 Glutathione S-transferase, N-terminal domain ASA_1383 PF13508 Acetyltransferase (GNAT) domain ASA_1386 PF13592 Winged helix-turn helix ASA_1386 PF13358 DDE superfamily endonuclease ASA_1388 PF08007 Cupin superfamily protein ASA_1389 PF00206 Lyase ASA_1389 PF08328 Adenylosuccinate lyase C-terminal ASA_1390 PF04356 Protein of unknown function (DUF489) ASA_1392 PF00293 NUDIX domain ASA_1393 PF00849 RNA pseudouridylate synthase ASA_1395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASA_1396 PF07690 Major Facilitator Superfamily ASA_1397 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASA_1397 PF02378 Phosphotransferase system, EIIC ASA_1397 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASA_1400 PF13592 Winged helix-turn helix ASA_1400 PF13358 DDE superfamily endonuclease ASA_1402 PF00290 Tryptophan synthase alpha chain ASA_1403 PF00291 Pyridoxal-phosphate dependent enzyme ASA_1404 PF00218 Indole-3-glycerol phosphate synthase ASA_1404 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ASA_1405 PF02885 Glycosyl transferase family, helical bundle domain ASA_1405 PF00591 Glycosyl transferase family, a/b domain ASA_1406 PF02885 Glycosyl transferase family, helical bundle domain ASA_1406 PF00591 Glycosyl transferase family, a/b domain ASA_1406 PF00117 Glutamine amidotransferase class-I ASA_1407 PF00425 chorismate binding enzyme ASA_1407 PF04715 Anthranilate synthase component I, N terminal region ASA_1409 PF02811 PHP domain ASA_1410 PF01300 Telomere recombination ASA_1411 PF02616 Segregation and condensation protein ScpA ASA_1412 PF04079 Segregation and condensation complex subunit ScpB ASA_1413 PF01479 S4 domain ASA_1413 PF00849 RNA pseudouridylate synthase ASA_1417 PF08361 MAATS-type transcriptional repressor, C-terminal region ASA_1417 PF00440 Bacterial regulatory proteins, tetR family ASA_1418 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_1418 PF00529 HlyD membrane-fusion protein of T1SS ASA_1419 PF00873 AcrB/AcrD/AcrF family ASA_1420 PF02321 Outer membrane efflux protein ASA_1421 PF13592 Winged helix-turn helix ASA_1421 PF13358 DDE superfamily endonuclease ASA_1422 PF16363 GDP-mannose 4,6 dehydratase ASA_1423 PF04321 RmlD substrate binding domain ASA_1424 PF00483 Nucleotidyl transferase ASA_1425 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ASA_1427 PF00437 Type II/IV secretion system protein ASA_1427 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ASA_1428 PF00482 Type II secretion system (T2SS), protein F ASA_1429 PF07963 Prokaryotic N-terminal methylation motif ASA_1429 PF08334 Type II secretion system (T2SS), protein G ASA_1437 PF03958 Bacterial type II/III secretion system short domain ASA_1437 PF00263 Bacterial type II and III secretion system protein ASA_1439 PF00005 ABC transporter ASA_1442 PF02350 UDP-N-acetylglucosamine 2-epimerase ASA_1448 PF01370 NAD dependent epimerase/dehydratase family ASA_1449 PF00953 Glycosyl transferase family 4 ASA_1450 PF02719 Polysaccharide biosynthesis protein ASA_1455 PF13333 Integrase core domain ASA_1455 PF00665 Integrase core domain ASA_1455 PF13276 HTH-like domain ASA_1456 PF00534 Glycosyl transferases group 1 ASA_1456 PF13439 Glycosyltransferase Family 4 ASA_1460 PF04337 Protein of unknown function, DUF480 ASA_1461 PF04434 SWIM zinc finger ASA_1461 PF00271 Helicase conserved C-terminal domain ASA_1461 PF00176 SNF2 family N-terminal domain ASA_1463 PF00665 Integrase core domain ASA_1464 PF01695 IstB-like ATP binding protein ASA_1466 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ASA_1467 PF00676 Dehydrogenase E1 component ASA_1468 PF02780 Transketolase, C-terminal domain ASA_1468 PF02779 Transketolase, pyrimidine binding domain ASA_1470 PF13592 Winged helix-turn helix ASA_1470 PF13358 DDE superfamily endonuclease ASA_1471 PF00313 'Cold-shock' DNA-binding domain ASA_1479 PF11871 Domain of unknown function (DUF3391) ASA_1479 PF01966 HD domain ASA_1480 PF00849 RNA pseudouridylate synthase ASA_1480 PF01479 S4 domain ASA_1482 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_1483 PF12850 Calcineurin-like phosphoesterase superfamily domain ASA_1487 PF00072 Response regulator receiver domain ASA_1487 PF01584 CheW-like domain ASA_1488 PF03705 CheR methyltransferase, all-alpha domain ASA_1488 PF01739 CheR methyltransferase, SAM binding domain ASA_1489 PF00460 Flagella basal body rod protein ASA_1490 PF00460 Flagella basal body rod protein ASA_1490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_1492 PF07559 Flagellar basal body protein FlaE ASA_1492 PF00460 Flagella basal body rod protein ASA_1492 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_1493 PF00460 Flagella basal body rod protein ASA_1493 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_1494 PF00460 Flagella basal body rod protein ASA_1494 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASA_1495 PF02107 Flagellar L-ring protein ASA_1496 PF02119 Flagellar P-ring protein ASA_1497 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ASA_1497 PF10135 Rod binding protein ASA_1500 PF01769 Divalent cation transporter ASA_1500 PF03448 MgtE intracellular N domain ASA_1500 PF00571 CBS domain ASA_1501 PF02541 Ppx/GppA phosphatase family ASA_1502 PF13090 Polyphosphate kinase C-terminal domain 2 ASA_1502 PF17941 Polyphosphate kinase C-terminal domain 1 ASA_1502 PF13089 Polyphosphate kinase N-terminal domain ASA_1502 PF02503 Polyphosphate kinase middle domain ASA_1506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1506 PF00989 PAS fold ASA_1506 PF00512 His Kinase A (phospho-acceptor) domain ASA_1507 PF00158 Sigma-54 interaction domain ASA_1507 PF02954 Bacterial regulatory protein, Fis family ASA_1508 PF01784 NIF3 (NGG1p interacting factor 3) ASA_1509 PF00551 Formyl transferase ASA_1510 PF02769 AIR synthase related protein, C-terminal domain ASA_1510 PF00586 AIR synthase related protein, N-terminal domain ASA_1513 PF00308 Bacterial dnaA protein ASA_1514 PF00463 Isocitrate lyase family ASA_1515 PF01274 Malate synthase ASA_1518 PF14437 MafB19-like deaminase ASA_1519 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1520 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1522 PF01895 PhoU domain ASA_1523 PF01595 Cyclin M transmembrane N-terminal domain ASA_1523 PF03471 Transporter associated domain ASA_1523 PF00571 CBS domain ASA_1526 PF13520 Amino acid permease ASA_1527 PF04116 Fatty acid hydroxylase superfamily ASA_1528 PF00005 ABC transporter ASA_1529 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1530 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_1531 PF00990 Diguanylate cyclase, GGDEF domain ASA_1531 PF08448 PAS fold ASA_1532 PF07690 Major Facilitator Superfamily ASA_1533 PF07730 Histidine kinase ASA_1533 PF05231 MASE1 ASA_1533 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1534 PF00072 Response regulator receiver domain ASA_1534 PF00196 Bacterial regulatory proteins, luxR family ASA_1535 PF14760 Rnk N-terminus ASA_1535 PF01272 Transcription elongation factor, GreA/GreB, C-term ASA_1538 PF00245 Alkaline phosphatase ASA_1539 PF00245 Alkaline phosphatase ASA_1540 PF01926 50S ribosome-binding GTPase ASA_1541 PF00850 Histone deacetylase domain ASA_1543 PF13307 Helicase C-terminal domain ASA_1543 PF06733 DEAD_2 ASA_1544 PF13609 Gram-negative porin ASA_1546 PF00155 Aminotransferase class I and II ASA_1547 PF05872 Bacterial protein of unknown function (DUF853) ASA_1550 PF00753 Metallo-beta-lactamase superfamily ASA_1550 PF03772 Competence protein ASA_1551 PF00664 ABC transporter transmembrane region ASA_1551 PF00005 ABC transporter ASA_1552 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ASA_1553 PF03966 Trm112p-like protein ASA_1554 PF02348 Cytidylyltransferase ASA_1555 PF00072 Response regulator receiver domain ASA_1555 PF00196 Bacterial regulatory proteins, luxR family ASA_1556 PF02151 UvrB/uvrC motif ASA_1556 PF08459 UvrC Helix-hairpin-helix N-terminal ASA_1556 PF01541 GIY-YIG catalytic domain ASA_1557 PF01066 CDP-alcohol phosphatidyltransferase ASA_1601 PF06892 Phage regulatory protein CII (CP76) ASA_1604 PF00717 Peptidase S24-like ASA_1606 PF00589 Phage integrase family ASA_1606 PF02899 Phage integrase, N-terminal SAM-like domain ASA_1608 PF03466 LysR substrate binding domain ASA_1608 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_1612 PF00149 Calcineurin-like phosphoesterase ASA_1614 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ASA_1615 PF01406 tRNA synthetases class I (C) catalytic domain ASA_1615 PF09190 DALR domain ASA_1616 PF13592 Winged helix-turn helix ASA_1616 PF13358 DDE superfamily endonuclease ASA_1627 PF01169 Uncharacterized protein family UPF0016 ASA_1628 PF01253 Translation initiation factor SUI1 ASA_1630 PF07670 Nucleoside recognition ASA_1630 PF02421 Ferrous iron transport protein B ASA_1630 PF07664 Ferrous iron transport protein B C terminus ASA_1633 PF00483 Nucleotidyl transferase ASA_1634 PF00437 Type II/IV secretion system protein ASA_1636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1636 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_1636 PF01627 Hpt domain ASA_1636 PF00512 His Kinase A (phospho-acceptor) domain ASA_1636 PF00989 PAS fold ASA_1636 PF00072 Response regulator receiver domain ASA_1637 PF01032 FecCD transport family ASA_1638 PF00005 ABC transporter ASA_1639 PF00793 DAHP synthetase I family ASA_1640 PF01219 Prokaryotic diacylglycerol kinase ASA_1641 PF01842 ACT domain ASA_1641 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASA_1641 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASA_1642 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ASA_1643 PF01812 5-formyltetrahydrofolate cyclo-ligase family ASA_1647 PF05173 Dihydrodipicolinate reductase, C-terminus ASA_1647 PF01113 Dihydrodipicolinate reductase, N-terminus ASA_1648 PF00117 Glutamine amidotransferase class-I ASA_1648 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ASA_1649 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ASA_1649 PF02142 MGS-like domain ASA_1649 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASA_1650 PF00682 HMGL-like ASA_1650 PF08502 LeuA allosteric (dimerisation) domain ASA_1651 PF07759 Protein of unknown function (DUF1615) ASA_1653 PF13592 Winged helix-turn helix ASA_1653 PF13358 DDE superfamily endonuclease ASA_1654 PF08378 Nuclease-related domain ASA_1657 PF13302 Acetyltransferase (GNAT) domain ASA_1658 PF00270 DEAD/DEAH box helicase ASA_1658 PF00271 Helicase conserved C-terminal domain ASA_1663 PF00376 MerR family regulatory protein ASA_1663 PF09278 MerR, DNA binding ASA_1666 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_1666 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ASA_1667 PF00310 Glutamine amidotransferases class-II ASA_1667 PF01645 Conserved region in glutamate synthase ASA_1667 PF04898 Glutamate synthase central domain ASA_1667 PF01493 GXGXG motif ASA_1668 PF04055 Radical SAM superfamily ASA_1668 PF16199 Radical_SAM C-terminal domain ASA_1669 PF03412 Peptidase C39 family ASA_1669 PF00005 ABC transporter ASA_1669 PF00664 ABC transporter transmembrane region ASA_1682 PF12241 Trans-2-enoyl-CoA reductase catalytic region ASA_1682 PF07055 Enoyl reductase FAD binding domain ASA_1682 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ASA_1683 PF03606 C4-dicarboxylate anaerobic carrier ASA_1684 PF00155 Aminotransferase class I and II ASA_1686 PF00462 Glutaredoxin ASA_1687 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ASA_1688 PF04851 Type III restriction enzyme, res subunit ASA_1688 PF00271 Helicase conserved C-terminal domain ASA_1689 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_1689 PF00529 HlyD membrane-fusion protein of T1SS ASA_1690 PF11742 Protein of unknown function (DUF3302) ASA_1691 PF02554 Carbon starvation protein CstA ASA_1692 PF04397 LytTr DNA-binding domain ASA_1692 PF00072 Response regulator receiver domain ASA_1693 PF06580 Histidine kinase ASA_1693 PF07694 5TMR of 5TMR-LYT ASA_1694 PF11871 Domain of unknown function (DUF3391) ASA_1694 PF01966 HD domain ASA_1695 PF00465 Iron-containing alcohol dehydrogenase ASA_1695 PF00171 Aldehyde dehydrogenase family ASA_1697 PF01914 MarC family integral membrane protein ASA_1698 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_1699 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1700 PF12911 N-terminal TM domain of oligopeptide transport permease C ASA_1700 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1701 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASA_1701 PF00005 ABC transporter ASA_1702 PF00005 ABC transporter ASA_1702 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASA_1703 PF03741 Integral membrane protein TerC family ASA_1704 PF01168 Alanine racemase, N-terminal domain ASA_1704 PF00842 Alanine racemase, C-terminal domain ASA_1706 PF00375 Sodium:dicarboxylate symporter family ASA_1709 PF01979 Amidohydrolase family ASA_1711 PF00672 HAMP domain ASA_1711 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_1712 PF01230 HIT domain ASA_1719 PF13721 SecD export protein N-terminal TM region ASA_1719 PF02355 Protein export membrane protein ASA_1719 PF07549 SecD/SecF GG Motif ASA_1720 PF02355 Protein export membrane protein ASA_1720 PF07549 SecD/SecF GG Motif ASA_1722 PF13426 PAS domain ASA_1722 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_1722 PF08447 PAS fold ASA_1724 PF00361 Proton-conducting membrane transporter ASA_1725 PF00361 Proton-conducting membrane transporter ASA_1726 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ASA_1726 PF00361 Proton-conducting membrane transporter ASA_1727 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ASA_1728 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ASA_1729 PF12838 4Fe-4S dicluster domain ASA_1730 PF00146 NADH dehydrogenase ASA_1731 PF00384 Molybdopterin oxidoreductase ASA_1731 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ASA_1731 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ASA_1732 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ASA_1732 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ASA_1734 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ASA_1734 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ASA_1735 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ASA_1736 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ASA_1737 PF13677 Membrane MotB of proton-channel complex MotA/MotB ASA_1737 PF00691 OmpA family ASA_1738 PF01618 MotA/TolQ/ExbB proton channel family ASA_1741 PF04536 TPM domain ASA_1743 PF03411 Penicillin-insensitive murein endopeptidase ASA_1744 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1745 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_1746 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1747 PF00005 ABC transporter ASA_1749 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ASA_1750 PF00248 Aldo/keto reductase family ASA_1752 PF00106 short chain dehydrogenase ASA_1753 PF01212 Beta-eliminating lyase ASA_1755 PF00072 Response regulator receiver domain ASA_1756 PF03466 LysR substrate binding domain ASA_1756 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_1758 PF13358 DDE superfamily endonuclease ASA_1758 PF13592 Winged helix-turn helix ASA_1759 PF00990 Diguanylate cyclase, GGDEF domain ASA_1759 PF03707 Bacterial signalling protein N terminal repeat ASA_1759 PF00563 EAL domain ASA_1760 PF00881 Nitroreductase family ASA_1763 PF07690 Major Facilitator Superfamily ASA_1764 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_1764 PF03466 LysR substrate binding domain ASA_1765 PF03466 LysR substrate binding domain ASA_1765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_1766 PF00925 GTP cyclohydrolase II ASA_1767 PF02224 Cytidylate kinase ASA_1768 PF00575 S1 RNA binding domain ASA_1769 PF00216 Bacterial DNA-binding protein ASA_1771 PF18073 Rubredoxin metal binding domain ASA_1772 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ASA_1775 PF06508 Queuosine biosynthesis protein QueC ASA_1776 PF04055 Radical SAM superfamily ASA_1777 PF12843 Putative quorum-sensing-regulated virulence factor ASA_1778 PF01923 Cobalamin adenosyltransferase ASA_1779 PF00816 H-NS histone family ASA_1780 PF13592 Winged helix-turn helix ASA_1780 PF13358 DDE superfamily endonuclease ASA_1781 PF03553 Na+/H+ antiporter family ASA_1782 PF00265 Thymidine kinase ASA_1784 PF10722 Putative bacterial sensory transduction regulator ASA_1786 PF00842 Alanine racemase, C-terminal domain ASA_1786 PF01168 Alanine racemase, N-terminal domain ASA_1788 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ASA_1788 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ASA_1789 PF13247 4Fe-4S dicluster domain ASA_1790 PF03916 Polysulphide reductase, NrfD ASA_1791 PF00374 Nickel-dependent hydrogenase ASA_1792 PF01750 Hydrogenase maturation protease ASA_1793 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE ASA_1794 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_1795 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1796 PF00528 Binding-protein-dependent transport system inner membrane component ASA_1796 PF12911 N-terminal TM domain of oligopeptide transport permease C ASA_1797 PF00005 ABC transporter ASA_1798 PF08402 TOBE domain ASA_1798 PF00005 ABC transporter ASA_1799 PF02492 CobW/HypB/UreG, nucleotide-binding domain ASA_1800 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ASA_1801 PF00586 AIR synthase related protein, N-terminal domain ASA_1801 PF02769 AIR synthase related protein, C-terminal domain ASA_1802 PF01924 Hydrogenase formation hypA family ASA_1803 PF01455 HupF/HypC family ASA_1804 PF00708 Acylphosphatase ASA_1804 PF07503 HypF finger ASA_1804 PF01300 Telomere recombination ASA_1804 PF17788 HypF Kae1-like domain ASA_1805 PF09107 Elongation factor SelB, winged helix ASA_1805 PF09106 Elongation factor SelB, winged helix ASA_1805 PF03144 Elongation factor Tu domain 2 ASA_1805 PF00009 Elongation factor Tu GTP binding domain ASA_1806 PF12390 Selenocysteine synthase N terminal ASA_1806 PF03841 L-seryl-tRNA selenium transferase ASA_1808 PF01750 Hydrogenase maturation protease ASA_1809 PF07450 Formate hydrogenlyase maturation protein HycH ASA_1810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ASA_1811 PF12838 4Fe-4S dicluster domain ASA_1812 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ASA_1812 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ASA_1812 PF00374 Nickel-dependent hydrogenase ASA_1813 PF00146 NADH dehydrogenase ASA_1814 PF00361 Proton-conducting membrane transporter ASA_1815 PF12798 4Fe-4S binding domain ASA_1815 PF00037 4Fe-4S binding domain ASA_1816 PF02705 K+ potassium transporter ASA_1818 PF07693 KAP family P-loop domain ASA_1820 PF13247 4Fe-4S dicluster domain ASA_1820 PF12800 4Fe-4S binding domain ASA_1823 PF02954 Bacterial regulatory protein, Fis family ASA_1823 PF01590 GAF domain ASA_1823 PF00158 Sigma-54 interaction domain ASA_1824 PF02634 FdhD/NarQ family ASA_1825 PF02132 RecR protein ASA_1825 PF13662 Toprim domain ASA_1826 PF00183 Hsp90 protein ASA_1826 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_1827 PF05191 Adenylate kinase, active site lid ASA_1828 PF00762 Ferrochelatase ASA_1829 PF01124 MAPEG family ASA_1830 PF00294 pfkB family carbohydrate kinase ASA_1831 PF17200 Single Cache domain 2 ASA_1831 PF00672 HAMP domain ASA_1831 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_1834 PF00990 Diguanylate cyclase, GGDEF domain ASA_1834 PF00563 EAL domain ASA_1834 PF03707 Bacterial signalling protein N terminal repeat ASA_1835 PF00483 Nucleotidyl transferase ASA_1837 PF07273 Protein of unknown function (DUF1439) ASA_1838 PF00425 chorismate binding enzyme ASA_1839 PF13193 AMP-binding enzyme C-terminal domain ASA_1839 PF00501 AMP-binding enzyme ASA_1840 PF00550 Phosphopantetheine attachment site ASA_1840 PF00857 Isochorismatase family ASA_1841 PF00550 Phosphopantetheine attachment site ASA_1841 PF00501 AMP-binding enzyme ASA_1841 PF00668 Condensation domain ASA_1841 PF13193 AMP-binding enzyme C-terminal domain ASA_1841 PF00975 Thioesterase domain ASA_1843 PF00550 Phosphopantetheine attachment site ASA_1843 PF00501 AMP-binding enzyme ASA_1843 PF13193 AMP-binding enzyme C-terminal domain ASA_1843 PF00668 Condensation domain ASA_1843 PF07993 Male sterility protein ASA_1844 PF00668 Condensation domain ASA_1844 PF08659 KR domain ASA_1844 PF00550 Phosphopantetheine attachment site ASA_1844 PF14765 Polyketide synthase dehydratase ASA_1844 PF00501 AMP-binding enzyme ASA_1844 PF02801 Beta-ketoacyl synthase, C-terminal domain ASA_1844 PF16197 Ketoacyl-synthetase C-terminal extension ASA_1844 PF13193 AMP-binding enzyme C-terminal domain ASA_1844 PF00109 Beta-ketoacyl synthase, N-terminal domain ASA_1845 PF01497 Periplasmic binding protein ASA_1846 PF01648 4'-phosphopantetheinyl transferase superfamily ASA_1846 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ASA_1847 PF00005 ABC transporter ASA_1848 PF01032 FecCD transport family ASA_1849 PF01032 FecCD transport family ASA_1850 PF07715 TonB-dependent Receptor Plug Domain ASA_1850 PF00593 TonB dependent receptor ASA_1853 PF11143 Protein of unknown function (DUF2919) ASA_1854 PF01544 CorA-like Mg2+ transporter protein ASA_1856 PF01012 Electron transfer flavoprotein domain ASA_1857 PF01012 Electron transfer flavoprotein domain ASA_1857 PF00766 Electron transfer flavoprotein FAD-binding domain ASA_1858 PF00266 Aminotransferase class-V ASA_1859 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASA_1860 PF00793 DAHP synthetase I family ASA_1861 PF00672 HAMP domain ASA_1861 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_1862 PF04055 Radical SAM superfamily ASA_1863 PF13742 OB-fold nucleic acid binding domain ASA_1863 PF02601 Exonuclease VII, large subunit ASA_1864 PF01292 Prokaryotic cytochrome b561 ASA_1865 PF02472 Biopolymer transport protein ExbD/TolR ASA_1866 PF01618 MotA/TolQ/ExbB proton channel family ASA_1868 PF00478 IMP dehydrogenase / GMP reductase domain ASA_1868 PF00571 CBS domain ASA_1869 PF02540 NAD synthase ASA_1869 PF00958 GMP synthase C terminal domain ASA_1869 PF00117 Glutamine amidotransferase class-I ASA_1872 PF13592 Winged helix-turn helix ASA_1872 PF13358 DDE superfamily endonuclease ASA_1874 PF05724 Thiopurine S-methyltransferase (TPMT) ASA_1875 PF05193 Peptidase M16 inactive domain ASA_1875 PF00675 Insulinase (Peptidase family M16) ASA_1875 PF16187 Middle or third domain of peptidase_M16 ASA_1876 PF00300 Histidine phosphatase superfamily (branch 1) ASA_1878 PF00892 EamA-like transporter family ASA_1879 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_1880 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ASA_1881 PF17757 UvrB interaction domain ASA_1881 PF03461 TRCF domain ASA_1881 PF00271 Helicase conserved C-terminal domain ASA_1881 PF02559 CarD-like/TRCF domain ASA_1881 PF00270 DEAD/DEAH box helicase ASA_1883 PF02687 FtsX-like permease family ASA_1883 PF12704 MacB-like periplasmic core domain ASA_1884 PF00005 ABC transporter ASA_1885 PF02687 FtsX-like permease family ASA_1885 PF12704 MacB-like periplasmic core domain ASA_1888 PF05698 Bacterial trigger factor protein (TF) C-terminus ASA_1888 PF05697 Bacterial trigger factor protein (TF) ASA_1888 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASA_1889 PF00574 Clp protease ASA_1890 PF10431 C-terminal, D2-small domain, of ClpB protein ASA_1890 PF06689 ClpX C4-type zinc finger ASA_1890 PF07724 AAA domain (Cdc48 subfamily) ASA_1891 PF00004 ATPase family associated with various cellular activities (AAA) ASA_1891 PF02190 ATP-dependent protease La (LON) substrate-binding domain ASA_1891 PF05362 Lon protease (S16) C-terminal proteolytic domain ASA_1892 PF00216 Bacterial DNA-binding protein ASA_1893 PF13145 PPIC-type PPIASE domain ASA_1894 PF00005 ABC transporter ASA_1894 PF12848 ABC transporter ASA_1895 PF00474 Sodium:solute symporter family ASA_1896 PF04341 Protein of unknown function, DUF485 ASA_1899 PF00378 Enoyl-CoA hydratase/isomerase ASA_1899 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ASA_1899 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ASA_1900 PF01235 Sodium:alanine symporter family ASA_1901 PF00583 Acetyltransferase (GNAT) family ASA_1903 PF01184 GPR1/FUN34/yaaH family ASA_1907 PF00376 MerR family regulatory protein ASA_1907 PF09278 MerR, DNA binding ASA_1908 PF00682 HMGL-like ASA_1909 PF00364 Biotin-requiring enzyme ASA_1909 PF02785 Biotin carboxylase C-terminal domain ASA_1909 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASA_1909 PF00289 Biotin carboxylase, N-terminal domain ASA_1910 PF00378 Enoyl-CoA hydratase/isomerase ASA_1911 PF01039 Carboxyl transferase domain ASA_1912 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ASA_1912 PF02770 Acyl-CoA dehydrogenase, middle domain ASA_1912 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ASA_1913 PF00171 Aldehyde dehydrogenase family ASA_1914 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ASA_1914 PF02770 Acyl-CoA dehydrogenase, middle domain ASA_1914 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ASA_1915 PF00378 Enoyl-CoA hydratase/isomerase ASA_1916 PF00378 Enoyl-CoA hydratase/isomerase ASA_1917 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ASA_1917 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ASA_1919 PF13520 Amino acid permease ASA_1920 PF01925 Sulfite exporter TauE/SafE ASA_1925 PF13358 DDE superfamily endonuclease ASA_1925 PF13592 Winged helix-turn helix ASA_1929 PF00990 Diguanylate cyclase, GGDEF domain ASA_1929 PF08448 PAS fold ASA_1930 PF01713 Smr domain ASA_1931 PF05175 Methyltransferase small domain ASA_1932 PF01264 Chorismate synthase ASA_1934 PF00270 DEAD/DEAH box helicase ASA_1934 PF00271 Helicase conserved C-terminal domain ASA_1937 PF03222 Tryptophan/tyrosine permease family ASA_1938 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ASA_1938 PF00356 Bacterial regulatory proteins, lacI family ASA_1939 PF00381 PTS HPr component phosphorylation site ASA_1939 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASA_1940 PF00294 pfkB family carbohydrate kinase ASA_1941 PF02378 Phosphotransferase system, EIIC ASA_1941 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASA_1942 PF06945 Protein of unknown function (DUF1289) ASA_1943 PF06725 3D domain ASA_1943 PF03562 MltA specific insert domain ASA_1944 PF00111 2Fe-2S iron-sulfur cluster binding domain ASA_1945 PF00268 Ribonucleotide reductase, small chain ASA_1946 PF03477 ATP cone domain ASA_1946 PF02867 Ribonucleotide reductase, barrel domain ASA_1946 PF00317 Ribonucleotide reductase, all-alpha domain ASA_1947 PF13419 Haloacid dehalogenase-like hydrolase ASA_1949 PF00521 DNA gyrase/topoisomerase IV, subunit A ASA_1949 PF03989 DNA gyrase C-terminal domain, beta-propeller ASA_1951 PF04055 Radical SAM superfamily ASA_1953 PF03129 Anticodon binding domain ASA_1953 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASA_1953 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASA_1953 PF02824 TGS domain ASA_1954 PF05198 Translation initiation factor IF-3, N-terminal domain ASA_1954 PF00707 Translation initiation factor IF-3, C-terminal domain ASA_1955 PF01632 Ribosomal protein L35 ASA_1956 PF00453 Ribosomal protein L20 ASA_1957 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ASA_1957 PF01409 tRNA synthetases class II core domain (F) ASA_1958 PF01588 Putative tRNA binding domain ASA_1958 PF03483 B3/4 domain ASA_1958 PF03484 tRNA synthetase B5 domain ASA_1958 PF03147 Ferredoxin-fold anticodon binding domain ASA_1958 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ASA_1959 PF00216 Bacterial DNA-binding protein ASA_1963 PF02146 Sir2 family ASA_1965 PF00990 Diguanylate cyclase, GGDEF domain ASA_1965 PF17152 Periplasmic sensor domain ASA_1966 PF00356 Bacterial regulatory proteins, lacI family ASA_1967 PF00294 pfkB family carbohydrate kinase ASA_1968 PF13407 Periplasmic binding protein domain ASA_1969 PF02653 Branched-chain amino acid transport system / permease component ASA_1971 PF05025 RbsD / FucU transport protein family ASA_1972 PF02798 Glutathione S-transferase, N-terminal domain ASA_1972 PF00043 Glutathione S-transferase, C-terminal domain ASA_1975 PF01171 PP-loop family ASA_1976 PF00582 Universal stress protein family ASA_1977 PF00027 Cyclic nucleotide-binding domain ASA_1977 PF13545 Crp-like helix-turn-helix domain ASA_1980 PF00403 Heavy-metal-associated domain ASA_1982 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ASA_1982 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ASA_1985 PF00115 Cytochrome C and Quinol oxidase polypeptide I ASA_1987 PF13185 GAF domain ASA_1988 PF17516 ProQ C-terminal domain ASA_1988 PF04352 ProQ/FINO family ASA_1989 PF11818 C-terminal domain of tail specific protease (DUF3340) ASA_1989 PF00595 PDZ domain ASA_1989 PF03572 Peptidase family S41 ASA_1989 PF17804 Tail specific protease N-terminal domain ASA_1990 PF11940 Domain of unknown function (DUF3458) Ig-like fold ASA_1990 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ASA_1990 PF01433 Peptidase family M1 domain ASA_1992 PF05088 Bacterial NAD-glutamate dehydrogenase ASA_1993 PF01180 Dihydroorotate dehydrogenase ASA_1994 PF07126 Cell-division protein ZapC ASA_1995 PF01170 Putative RNA methylase family UPF0020 ASA_1995 PF10672 S-adenosylmethionine-dependent methyltransferase ASA_1995 PF02926 THUMP domain ASA_1999 PF04957 Ribosome modulation factor ASA_2000 PF07977 FabA-like domain ASA_2001 PF13654 AAA domain ASA_2001 PF05362 Lon protease (S16) C-terminal proteolytic domain ASA_2016 PF01695 IstB-like ATP binding protein ASA_2017 PF00665 Integrase core domain ASA_2031 PF00106 short chain dehydrogenase ASA_2036 PF06974 Protein of unknown function (DUF1298) ASA_2036 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ASA_2039 PF03972 MmgE/PrpD family ASA_2040 PF00285 Citrate synthase, C-terminal domain ASA_2044 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF ASA_2044 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ASA_2044 PF01189 16S rRNA methyltransferase RsmB/F ASA_2047 PF01026 TatD related DNase ASA_2048 PF09115 DNA polymerase III, delta subunit, C terminal ASA_2049 PF02223 Thymidylate kinase ASA_2050 PF02618 YceG-like family ASA_2051 PF01063 Amino-transferase class IV ASA_2052 PF02801 Beta-ketoacyl synthase, C-terminal domain ASA_2052 PF00109 Beta-ketoacyl synthase, N-terminal domain ASA_2053 PF00550 Phosphopantetheine attachment site ASA_2055 PF00698 Acyl transferase domain ASA_2056 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ASA_2056 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ASA_2057 PF02504 Fatty acid synthesis protein ASA_2058 PF01783 Ribosomal L32p protein family ASA_2059 PF02620 Large ribosomal RNA subunit accumulation protein YceD ASA_2060 PF02545 Maf-like protein ASA_2061 PF13419 Haloacid dehalogenase-like hydrolase ASA_2062 PF01479 S4 domain ASA_2062 PF00849 RNA pseudouridylate synthase ASA_2064 PF10150 Ribonuclease E/G family ASA_2064 PF00575 S1 RNA binding domain ASA_2064 PF12111 Polyribonucleotide phosphorylase C terminal ASA_2066 PF01384 Phosphate transporter family ASA_2067 PF00692 dUTPase ASA_2068 PF00485 Phosphoribulokinase / Uridine kinase family ASA_2069 PF10609 NUBPL iron-transfer P-loop NTPase ASA_2070 PF08264 Anticodon-binding domain of tRNA ASA_2070 PF09334 tRNA synthetases class I (M) ASA_2070 PF01588 Putative tRNA binding domain ASA_2072 PF00708 Acylphosphatase ASA_2073 PF12729 Four helix bundle sensory module for signal transduction ASA_2073 PF00672 HAMP domain ASA_2073 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_2074 PF17785 PUA-like domain ASA_2074 PF10672 S-adenosylmethionine-dependent methyltransferase ASA_2077 PF02769 AIR synthase related protein, C-terminal domain ASA_2077 PF00586 AIR synthase related protein, N-terminal domain ASA_2079 PF00753 Metallo-beta-lactamase superfamily ASA_2080 PF01386 Ribosomal L25p family ASA_2082 PF04408 Helicase associated domain (HA2) ASA_2082 PF00271 Helicase conserved C-terminal domain ASA_2082 PF11898 Domain of unknown function (DUF3418) ASA_2082 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ASA_2082 PF00270 DEAD/DEAH box helicase ASA_2084 PF00196 Bacterial regulatory proteins, luxR family ASA_2084 PF00072 Response regulator receiver domain ASA_2087 PF02575 YbaB/EbfC DNA-binding family ASA_2088 PF12170 DNA polymerase III tau subunit V interacting with alpha ASA_2088 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ASA_2088 PF12169 DNA polymerase III subunits gamma and tau domain III ASA_2089 PF00156 Phosphoribosyl transferase domain ASA_2090 PF04304 Protein of unknown function (DUF454) ASA_2091 PF01207 Dihydrouridine synthase (Dus) ASA_2094 PF00570 HRDC domain ASA_2094 PF01612 3'-5' exonuclease ASA_2095 PF13193 AMP-binding enzyme C-terminal domain ASA_2095 PF00501 AMP-binding enzyme ASA_2096 PF12697 Alpha/beta hydrolase family ASA_2098 PF00814 Glycoprotease family ASA_2099 PF13307 Helicase C-terminal domain ASA_2099 PF04851 Type III restriction enzyme, res subunit ASA_2101 PF08029 HisG, C-terminal domain ASA_2101 PF01634 ATP phosphoribosyltransferase ASA_2102 PF00815 Histidinol dehydrogenase ASA_2103 PF00155 Aminotransferase class I and II ASA_2104 PF00475 Imidazoleglycerol-phosphate dehydratase ASA_2104 PF08645 Polynucleotide kinase 3 phosphatase ASA_2105 PF00117 Glutamine amidotransferase class-I ASA_2106 PF00977 Histidine biosynthesis protein ASA_2107 PF00072 Response regulator receiver domain ASA_2109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_2109 PF01627 Hpt domain ASA_2109 PF00512 His Kinase A (phospho-acceptor) domain ASA_2109 PF00072 Response regulator receiver domain ASA_2110 PF00977 Histidine biosynthesis protein ASA_2111 PF01502 Phosphoribosyl-AMP cyclohydrolase ASA_2111 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ASA_2113 PF08279 HTH domain ASA_2113 PF13280 WYL domain ASA_2114 PF13193 AMP-binding enzyme C-terminal domain ASA_2114 PF00501 AMP-binding enzyme ASA_2115 PF13333 Integrase core domain ASA_2115 PF00665 Integrase core domain ASA_2115 PF13276 HTH-like domain ASA_2120 PF04002 RadC-like JAB domain ASA_2124 PF13276 HTH-like domain ASA_2124 PF00665 Integrase core domain ASA_2124 PF13333 Integrase core domain ASA_2128 PF01338 Bacillus thuringiensis toxin ASA_2129 PF13333 Integrase core domain ASA_2129 PF13276 HTH-like domain ASA_2129 PF00665 Integrase core domain ASA_2135 PF04972 BON domain ASA_2136 PF00563 EAL domain ASA_2136 PF00990 Diguanylate cyclase, GGDEF domain ASA_2136 PF01590 GAF domain ASA_2136 PF00360 Phytochrome region ASA_2137 PF02653 Branched-chain amino acid transport system / permease component ASA_2138 PF02653 Branched-chain amino acid transport system / permease component ASA_2139 PF00005 ABC transporter ASA_2140 PF13407 Periplasmic binding protein domain ASA_2141 PF13592 Winged helix-turn helix ASA_2141 PF13358 DDE superfamily endonuclease ASA_2142 PF00704 Glycosyl hydrolases family 18 ASA_2142 PF08329 Chitinase A, N-terminal domain ASA_2144 PF03831 PhnA domain ASA_2144 PF08274 PhnA Zinc-Ribbon ASA_2145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ASA_2145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ASA_2145 PF00378 Enoyl-CoA hydratase/isomerase ASA_2146 PF00108 Thiolase, N-terminal domain ASA_2146 PF02803 Thiolase, C-terminal domain ASA_2147 PF17863 AAA lid domain ASA_2147 PF07726 ATPase family associated with various cellular activities (AAA) ASA_2148 PF01882 Protein of unknown function DUF58 ASA_2150 PF07728 AAA domain (dynein-related subfamily) ASA_2150 PF13519 von Willebrand factor type A domain ASA_2150 PF17863 AAA lid domain ASA_2154 PF04545 Sigma-70, region 4 ASA_2154 PF04542 Sigma-70 region 2 ASA_2156 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ASA_2157 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ASA_2158 PF08668 HDOD domain ASA_2158 PF00563 EAL domain ASA_2159 PF02803 Thiolase, C-terminal domain ASA_2159 PF00108 Thiolase, N-terminal domain ASA_2160 PF09278 MerR, DNA binding ASA_2160 PF00376 MerR family regulatory protein ASA_2161 PF00375 Sodium:dicarboxylate symporter family ASA_2162 PF06865 Pyrimidine/purine nucleoside phosphorylase ASA_2163 PF03315 Serine dehydratase beta chain ASA_2163 PF03313 Serine dehydratase alpha chain ASA_2164 PF03313 Serine dehydratase alpha chain ASA_2164 PF03315 Serine dehydratase beta chain ASA_2165 PF13406 Transglycosylase SLT domain ASA_2166 PF05166 YcgL domain ASA_2167 PF05209 Septum formation inhibitor MinC, N-terminal domain ASA_2167 PF03775 Septum formation inhibitor MinC, C-terminal domain ASA_2168 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ASA_2169 PF03776 Septum formation topological specificity factor MinE ASA_2170 PF04269 Protein of unknown function, DUF440 ASA_2171 PF00912 Transglycosylase ASA_2172 PF04269 Protein of unknown function, DUF440 ASA_2174 PF17783 CvfB-like winged helix domain ASA_2174 PF13509 S1 domain ASA_2179 PF02525 Flavodoxin-like fold ASA_2180 PF00892 EamA-like transporter family ASA_2181 PF02222 ATP-grasp domain ASA_2182 PF13419 Haloacid dehalogenase-like hydrolase ASA_2183 PF00677 Lumazine binding domain ASA_2184 PF06786 Uncharacterised protein family (UPF0253) ASA_2185 PF01554 MatE ASA_2190 PF00136 DNA polymerase family B ASA_2190 PF03104 DNA polymerase family B, exonuclease domain ASA_2192 PF00990 Diguanylate cyclase, GGDEF domain ASA_2195 PF03279 Bacterial lipid A biosynthesis acyltransferase ASA_2196 PF03279 Bacterial lipid A biosynthesis acyltransferase ASA_2198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2198 PF03466 LysR substrate binding domain ASA_2199 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASA_2199 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASA_2200 PF01261 Xylose isomerase-like TIM barrel ASA_2201 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2201 PF03466 LysR substrate binding domain ASA_2205 PF05433 Glycine zipper 2TM domain ASA_2209 PF01032 FecCD transport family ASA_2210 PF00005 ABC transporter ASA_2211 PF07690 Major Facilitator Superfamily ASA_2213 PF07152 YaeQ protein ASA_2223 PF13276 HTH-like domain ASA_2223 PF00665 Integrase core domain ASA_2223 PF13333 Integrase core domain ASA_2226 PF03330 Lytic transglycolase ASA_2226 PF05036 Sporulation related domain ASA_2227 PF04310 MukB N-terminal ASA_2227 PF16330 MukB hinge domain ASA_2229 PF17193 MukF C-terminal domain ASA_2229 PF17192 MukF middle domain ASA_2229 PF03882 MukF winged-helix domain ASA_2231 PF02698 DUF218 domain ASA_2232 PF00121 Triosephosphate isomerase ASA_2233 PF00365 Phosphofructokinase ASA_2242 PF13419 Haloacid dehalogenase-like hydrolase ASA_2243 PF00883 Cytosol aminopeptidase family, catalytic domain ASA_2243 PF02789 Cytosol aminopeptidase family, N-terminal domain ASA_2252 PF13358 DDE superfamily endonuclease ASA_2252 PF13592 Winged helix-turn helix ASA_2254 PF11398 Protein of unknown function (DUF2813) ASA_2255 PF02311 AraC-like ligand binding domain ASA_2255 PF12833 Helix-turn-helix domain ASA_2257 PF03466 LysR substrate binding domain ASA_2257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2258 PF01925 Sulfite exporter TauE/SafE ASA_2261 PF01820 D-ala D-ala ligase N-terminus ASA_2261 PF07478 D-ala D-ala ligase C-terminus ASA_2263 PF00255 Glutathione peroxidase ASA_2264 PF00270 DEAD/DEAH box helicase ASA_2264 PF00271 Helicase conserved C-terminal domain ASA_2265 PF13673 Acetyltransferase (GNAT) domain ASA_2267 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ASA_2270 PF01928 CYTH domain ASA_2274 PF00465 Iron-containing alcohol dehydrogenase ASA_2275 PF03992 Antibiotic biosynthesis monooxygenase ASA_2276 PF08543 Phosphomethylpyrimidine kinase ASA_2280 PF00561 alpha/beta hydrolase fold ASA_2280 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ASA_2281 PF01575 MaoC like domain ASA_2284 PF00005 ABC transporter ASA_2284 PF00664 ABC transporter transmembrane region ASA_2286 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ASA_2286 PF00072 Response regulator receiver domain ASA_2286 PF01627 Hpt domain ASA_2286 PF00512 His Kinase A (phospho-acceptor) domain ASA_2286 PF00672 HAMP domain ASA_2286 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_2287 PF00085 Thioredoxin ASA_2288 PF00939 Sodium:sulfate symporter transmembrane region ASA_2289 PF00343 Carbohydrate phosphorylase ASA_2293 PF04715 Anthranilate synthase component I, N terminal region ASA_2293 PF00425 chorismate binding enzyme ASA_2294 PF00293 NUDIX domain ASA_2295 PF03222 Tryptophan/tyrosine permease family ASA_2296 PF00375 Sodium:dicarboxylate symporter family ASA_2297 PF00270 DEAD/DEAH box helicase ASA_2297 PF09382 RQC domain ASA_2297 PF16124 RecQ zinc-binding ASA_2297 PF00570 HRDC domain ASA_2297 PF00271 Helicase conserved C-terminal domain ASA_2298 PF06798 PrkA serine protein kinase C-terminal domain ASA_2298 PF08298 PrkA AAA domain ASA_2299 PF04285 Protein of unknown function (DUF444) ASA_2300 PF04293 SpoVR like protein ASA_2301 PF00392 Bacterial regulatory proteins, gntR family ASA_2301 PF07840 FadR C-terminal domain ASA_2302 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ASA_2303 PF02600 Disulfide bond formation protein DsbB ASA_2304 PF09335 SNARE associated Golgi protein ASA_2306 PF12344 Ultra-violet resistance protein B ASA_2306 PF04851 Type III restriction enzyme, res subunit ASA_2306 PF00271 Helicase conserved C-terminal domain ASA_2306 PF17757 UvrB interaction domain ASA_2306 PF02151 UvrB/uvrC motif ASA_2308 PF06826 Predicted Permease Membrane Region ASA_2308 PF02080 TrkA-C domain ASA_2309 PF01464 Transglycosylase SLT domain ASA_2309 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_2312 PF01970 Tripartite tricarboxylate transporter TctA family ASA_2313 PF08279 HTH domain ASA_2313 PF00072 Response regulator receiver domain ASA_2313 PF12431 Transcriptional regulator ASA_2314 PF00989 PAS fold ASA_2314 PF17203 Single cache domain 3 ASA_2314 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ASA_2314 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_2315 PF00480 ROK family ASA_2315 PF01047 MarR family ASA_2316 PF17200 Single Cache domain 2 ASA_2316 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_2316 PF00672 HAMP domain ASA_2317 PF02810 SEC-C motif ASA_2318 PF01266 FAD dependent oxidoreductase ASA_2318 PF04324 BFD-like [2Fe-2S] binding domain ASA_2319 PF00890 FAD binding domain ASA_2320 PF13183 4Fe-4S dicluster domain ASA_2320 PF02754 Cysteine-rich domain ASA_2321 PF02335 Cytochrome c552 ASA_2322 PF13435 Cytochrome c554 and c-prime ASA_2322 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) ASA_2323 PF00037 4Fe-4S binding domain ASA_2323 PF13247 4Fe-4S dicluster domain ASA_2324 PF03916 Polysulphide reductase, NrfD ASA_2325 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ASA_2325 PF01578 Cytochrome C assembly protein ASA_2326 PF08534 Redoxin ASA_2327 PF03918 Cytochrome C biogenesis protein ASA_2329 PF00768 D-alanyl-D-alanine carboxypeptidase ASA_2330 PF01212 Beta-eliminating lyase ASA_2332 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ASA_2333 PF01266 FAD dependent oxidoreductase ASA_2335 PF07969 Amidohydrolase family ASA_2338 PF08267 Cobalamin-independent synthase, N-terminal domain ASA_2338 PF01717 Cobalamin-independent synthase, Catalytic domain ASA_2339 PF03466 LysR substrate binding domain ASA_2339 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2341 PF00593 TonB dependent receptor ASA_2341 PF07715 TonB-dependent Receptor Plug Domain ASA_2342 PF12833 Helix-turn-helix domain ASA_2342 PF06445 GyrI-like small molecule binding domain ASA_2343 PF00106 short chain dehydrogenase ASA_2344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2344 PF03466 LysR substrate binding domain ASA_2345 PF13460 NAD(P)H-binding ASA_2347 PF01053 Cys/Met metabolism PLP-dependent enzyme ASA_2348 PF00675 Insulinase (Peptidase family M16) ASA_2348 PF05193 Peptidase M16 inactive domain ASA_2349 PF02774 Semialdehyde dehydrogenase, dimerisation domain ASA_2349 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASA_2350 PF18381 YcaO cyclodehydratase C-terminal domain ASA_2350 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ASA_2351 PF01226 Formate/nitrite transporter ASA_2352 PF02901 Pyruvate formate lyase-like ASA_2352 PF01228 Glycine radical ASA_2353 PF03692 Putative zinc- or iron-chelating domain ASA_2354 PF00549 CoA-ligase ASA_2354 PF02629 CoA binding domain ASA_2355 PF08442 ATP-grasp domain ASA_2355 PF00549 CoA-ligase ASA_2356 PF02817 e3 binding domain ASA_2356 PF00364 Biotin-requiring enzyme ASA_2356 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASA_2357 PF16078 2-oxoglutarate dehydrogenase N-terminus ASA_2357 PF00676 Dehydrogenase E1 component ASA_2357 PF16870 2-oxoglutarate dehydrogenase C-terminal ASA_2357 PF02779 Transketolase, pyrimidine binding domain ASA_2358 PF13085 2Fe-2S iron-sulfur cluster binding domain ASA_2359 PF00890 FAD binding domain ASA_2359 PF02910 Fumarate reductase flavoprotein C-term ASA_2360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ASA_2361 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ASA_2362 PF00285 Citrate synthase, C-terminal domain ASA_2365 PF00109 Beta-ketoacyl synthase, N-terminal domain ASA_2365 PF02801 Beta-ketoacyl synthase, C-terminal domain ASA_2366 PF01266 FAD dependent oxidoreductase ASA_2366 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ASA_2368 PF03606 C4-dicarboxylate anaerobic carrier ASA_2371 PF01863 Protein of unknown function DUF45 ASA_2374 PF01197 Ribosomal protein L31 ASA_2375 PF00444 Ribosomal protein L36 ASA_2376 PF02887 Pyruvate kinase, alpha/beta domain ASA_2376 PF00224 Pyruvate kinase, barrel domain ASA_2377 PF00367 phosphotransferase system, EIIB ASA_2377 PF02378 Phosphotransferase system, EIIC ASA_2378 PF08532 Beta-galactosidase trimerisation domain ASA_2378 PF02449 Beta-galactosidase ASA_2378 PF08533 Beta-galactosidase C-terminal domain ASA_2379 PF07745 Glycosyl hydrolase family 53 ASA_2380 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2381 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2382 PF13416 Bacterial extracellular solute-binding protein ASA_2386 PF07745 Glycosyl hydrolase family 53 ASA_2387 PF07745 Glycosyl hydrolase family 53 ASA_2388 PF02264 LamB porin ASA_2389 PF00356 Bacterial regulatory proteins, lacI family ASA_2390 PF16363 GDP-mannose 4,6 dehydratase ASA_2391 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ASA_2391 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ASA_2392 PF10509 Galactokinase galactose-binding signature ASA_2392 PF00288 GHMP kinases N terminal domain ASA_2392 PF08544 GHMP kinases C terminal ASA_2393 PF12833 Helix-turn-helix domain ASA_2393 PF02311 AraC-like ligand binding domain ASA_2394 PF02653 Branched-chain amino acid transport system / permease component ASA_2395 PF00005 ABC transporter ASA_2396 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ASA_2397 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASA_2398 PF00596 Class II Aldolase and Adducin N-terminal domain ASA_2399 PF02610 L-arabinose isomerase ASA_2399 PF11762 L-arabinose isomerase C-terminal domain ASA_2400 PF03466 LysR substrate binding domain ASA_2400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2402 PF00795 Carbon-nitrogen hydrolase ASA_2403 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_2405 PF00929 Exonuclease ASA_2405 PF08411 Exonuclease C-terminal ASA_2408 PF03788 LrgA family ASA_2409 PF04172 LrgB-like family ASA_2410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASA_2410 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ASA_2411 PF00501 AMP-binding enzyme ASA_2412 PF08891 YfcL protein ASA_2414 PF03741 Integral membrane protein TerC family ASA_2415 PF00691 OmpA family ASA_2416 PF00990 Diguanylate cyclase, GGDEF domain ASA_2416 PF17152 Periplasmic sensor domain ASA_2417 PF13689 YfiR/HmsC-like ASA_2418 PF18024 Helix-turn-helix domain ASA_2418 PF00158 Sigma-54 interaction domain ASA_2419 PF01329 Pterin 4 alpha carbinolamine dehydratase ASA_2420 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ASA_2421 PF05128 Domain of unknown function (DUF697) ASA_2422 PF04317 YcjX-like family, DUF463 ASA_2424 PF06667 Phage shock protein B ASA_2425 PF04012 PspA/IM30 family ASA_2426 PF02954 Bacterial regulatory protein, Fis family ASA_2426 PF00158 Sigma-54 interaction domain ASA_2427 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_2428 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2429 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2429 PF12911 N-terminal TM domain of oligopeptide transport permease C ASA_2430 PF00005 ABC transporter ASA_2430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASA_2431 PF00005 ABC transporter ASA_2433 PF00156 Phosphoribosyl transferase domain ASA_2434 PF02674 Colicin V production protein ASA_2435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASA_2435 PF02403 Seryl-tRNA synthetase N-terminal domain ASA_2436 PF12002 MgsA AAA+ ATPase C terminal ASA_2436 PF16193 AAA C-terminal domain ASA_2436 PF00004 ATPase family associated with various cellular activities (AAA) ASA_2437 PF03548 Outer membrane lipoprotein carrier protein LolA ASA_2438 PF09397 Ftsk gamma domain ASA_2438 PF01580 FtsK/SpoIIIE family ASA_2438 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ASA_2438 PF17854 FtsK alpha domain ASA_2439 PF01037 Lrp/AsnC ligand binding domain ASA_2440 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_2441 PF17158 Membrane-associated sensor, integral membrane domain ASA_2441 PF00990 Diguanylate cyclase, GGDEF domain ASA_2442 PF05433 Glycine zipper 2TM domain ASA_2443 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ASA_2444 PF04377 Arginine-tRNA-protein transferase, C terminus ASA_2444 PF04376 Arginine-tRNA-protein transferase, N terminus ASA_2445 PF01176 Translation initiation factor 1A / IF-1 ASA_2446 PF00004 ATPase family associated with various cellular activities (AAA) ASA_2446 PF07724 AAA domain (Cdc48 subfamily) ASA_2446 PF17871 AAA lid domain ASA_2446 PF02861 Clp amino terminal domain, pathogenicity island component ASA_2446 PF10431 C-terminal, D2-small domain, of ClpB protein ASA_2447 PF02617 ATP-dependent Clp protease adaptor protein ClpS ASA_2448 PF00313 'Cold-shock' DNA-binding domain ASA_2449 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ASA_2449 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ASA_2454 PF03400 IS1 transposase ASA_2455 PF04717 Type VI secretion system, phage-baseplate injector ASA_2460 PF00158 Sigma-54 interaction domain ASA_2460 PF02830 V4R domain ASA_2460 PF06505 Activator of aromatic catabolism ASA_2460 PF02954 Bacterial regulatory protein, Fis family ASA_2461 PF10431 C-terminal, D2-small domain, of ClpB protein ASA_2461 PF00004 ATPase family associated with various cellular activities (AAA) ASA_2461 PF07724 AAA domain (Cdc48 subfamily) ASA_2461 PF17871 AAA lid domain ASA_2474 PF01740 STAS domain ASA_2474 PF00916 Sulfate permease family ASA_2478 PF13592 Winged helix-turn helix ASA_2478 PF13358 DDE superfamily endonuclease ASA_2484 PF00892 EamA-like transporter family ASA_2485 PF02508 Rnf-Nqr subunit, membrane protein ASA_2486 PF04060 Putative Fe-S cluster ASA_2487 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ASA_2487 PF13375 RnfC Barrel sandwich hybrid domain ASA_2487 PF10531 SLBB domain ASA_2487 PF12838 4Fe-4S dicluster domain ASA_2488 PF03116 NQR2, RnfD, RnfE family ASA_2489 PF04205 FMN-binding domain ASA_2490 PF02508 Rnf-Nqr subunit, membrane protein ASA_2491 PF10576 Iron-sulfur binding domain of endonuclease III ASA_2491 PF00633 Helix-hairpin-helix motif ASA_2491 PF00730 HhH-GPD superfamily base excision DNA repair protein ASA_2492 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ASA_2493 PF18393 MotY N-terminal domain ASA_2493 PF00691 OmpA family ASA_2494 PF00672 HAMP domain ASA_2494 PF12729 Four helix bundle sensory module for signal transduction ASA_2494 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_2495 PF00929 Exonuclease ASA_2496 PF13726 Na+-H+ antiporter family ASA_2496 PF03553 Na+/H+ antiporter family ASA_2497 PF00563 EAL domain ASA_2497 PF00990 Diguanylate cyclase, GGDEF domain ASA_2497 PF13188 PAS domain ASA_2497 PF03707 Bacterial signalling protein N terminal repeat ASA_2499 PF03880 DbpA RNA binding domain ASA_2499 PF00270 DEAD/DEAH box helicase ASA_2499 PF00271 Helicase conserved C-terminal domain ASA_2500 PF03061 Thioesterase superfamily ASA_2502 PF02913 FAD linked oxidases, C-terminal domain ASA_2502 PF01565 FAD binding domain ASA_2502 PF13183 4Fe-4S dicluster domain ASA_2504 PF03471 Transporter associated domain ASA_2504 PF03741 Integral membrane protein TerC family ASA_2505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ASA_2506 PF00962 Adenosine/AMP deaminase ASA_2507 PF13344 Haloacid dehalogenase-like hydrolase ASA_2508 PF00999 Sodium/hydrogen exchanger family ASA_2508 PF02254 TrkA-N domain ASA_2510 PF00733 Asparagine synthase ASA_2510 PF13537 Glutamine amidotransferase domain ASA_2511 PF03577 Peptidase family C69 ASA_2512 PF13592 Winged helix-turn helix ASA_2512 PF13358 DDE superfamily endonuclease ASA_2515 PF00043 Glutathione S-transferase, C-terminal domain ASA_2515 PF13417 Glutathione S-transferase, N-terminal domain ASA_2516 PF02798 Glutathione S-transferase, N-terminal domain ASA_2516 PF14497 Glutathione S-transferase, C-terminal domain ASA_2519 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ASA_2521 PF00849 RNA pseudouridylate synthase ASA_2523 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_2523 PF08447 PAS fold ASA_2525 PF01027 Inhibitor of apoptosis-promoting Bax1 ASA_2526 PF12805 FUSC-like inner membrane protein yccS ASA_2527 PF04358 DsrC like protein ASA_2528 PF05036 Sporulation related domain ASA_2529 PF08245 Mur ligase middle domain ASA_2529 PF02875 Mur ligase family, glutamate ligase domain ASA_2530 PF01039 Carboxyl transferase domain ASA_2530 PF17848 Acetyl-coA carboxylase zinc finger domain ASA_2531 PF01416 tRNA pseudouridine synthase ASA_2533 PF02774 Semialdehyde dehydrogenase, dimerisation domain ASA_2533 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASA_2534 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASA_2534 PF11890 Domain of unknown function (DUF3410) ASA_2534 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASA_2535 PF01569 PAP2 superfamily ASA_2536 PF03180 NLPA lipoprotein ASA_2540 PF01483 Proprotein convertase P-domain ASA_2540 PF00082 Subtilase family ASA_2542 PF00933 Glycosyl hydrolase family 3 N terminal domain ASA_2542 PF01915 Glycosyl hydrolase family 3 C-terminal domain ASA_2542 PF14310 Fibronectin type III-like domain ASA_2544 PF02896 PEP-utilising enzyme, TIM barrel domain ASA_2544 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ASA_2544 PF00391 PEP-utilising enzyme, mobile domain ASA_2545 PF03618 Kinase/pyrophosphorylase ASA_2547 PF00324 Amino acid permease ASA_2553 PF03239 Iron permease FTR1 family ASA_2554 PF01593 Flavin containing amine oxidoreductase ASA_2559 PF03600 Citrate transporter ASA_2566 PF02308 MgtC family ASA_2576 PF01625 Peptide methionine sulfoxide reductase ASA_2577 PF00583 Acetyltransferase (GNAT) family ASA_2577 PF00696 Amino acid kinase family ASA_2578 PF01842 ACT domain ASA_2578 PF00696 Amino acid kinase family ASA_2580 PF00884 Sulfatase ASA_2581 PF02016 LD-carboxypeptidase N-terminal domain ASA_2581 PF17676 LD-carboxypeptidase C-terminal domain ASA_2583 PF01906 Putative heavy-metal-binding ASA_2584 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_2585 PF05728 Uncharacterised protein family (UPF0227) ASA_2587 PF01432 Peptidase family M3 ASA_2587 PF08439 Oligopeptidase F ASA_2589 PF05661 Protein of unknown function (DUF808) ASA_2591 PF02769 AIR synthase related protein, C-terminal domain ASA_2591 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ASA_2591 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ASA_2592 PF01464 Transglycosylase SLT domain ASA_2592 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_2594 PF07191 zinc-ribbons ASA_2595 PF01926 50S ribosome-binding GTPase ASA_2595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ASA_2596 PF13360 PQQ-like domain ASA_2597 PF09976 Tetratricopeptide repeat-like domain ASA_2598 PF13393 Histidyl-tRNA synthetase ASA_2598 PF03129 Anticodon binding domain ASA_2599 PF04551 GcpE protein ASA_2600 PF13464 Domain of unknown function (DUF4115) ASA_2602 PF04055 Radical SAM superfamily ASA_2603 PF00334 Nucleoside diphosphate kinase ASA_2604 PF12404 Peptidase ASA_2604 PF00883 Cytosol aminopeptidase family, catalytic domain ASA_2605 PF00883 Cytosol aminopeptidase family, catalytic domain ASA_2605 PF12404 Peptidase ASA_2606 PF00111 2Fe-2S iron-sulfur cluster binding domain ASA_2607 PF00012 Hsp70 protein ASA_2608 PF00226 DnaJ domain ASA_2608 PF07743 HSCB C-terminal oligomerisation domain ASA_2610 PF01521 Iron-sulphur cluster biosynthesis ASA_2611 PF01592 NifU-like N terminal domain ASA_2612 PF00266 Aminotransferase class-V ASA_2613 PF02082 Transcriptional regulator ASA_2614 PF00588 SpoU rRNA Methylase family ASA_2619 PF07719 Tetratricopeptide repeat ASA_2619 PF13181 Tetratricopeptide repeat ASA_2620 PF00581 Rhodanese-like domain ASA_2621 PF02355 Protein export membrane protein ASA_2621 PF07549 SecD/SecF GG Motif ASA_2622 PF13721 SecD export protein N-terminal TM region ASA_2622 PF02355 Protein export membrane protein ASA_2622 PF07549 SecD/SecF GG Motif ASA_2623 PF02699 Preprotein translocase subunit ASA_2624 PF01702 Queuine tRNA-ribosyltransferase ASA_2625 PF02547 Queuosine biosynthesis protein ASA_2626 PF00571 CBS domain ASA_2627 PF00578 AhpC/TSA family ASA_2627 PF10417 C-terminal domain of 1-Cys peroxiredoxin ASA_2628 PF13192 Thioredoxin domain ASA_2628 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_2629 PF07690 Major Facilitator Superfamily ASA_2631 PF02347 Glycine cleavage system P-protein ASA_2632 PF01597 Glycine cleavage H-protein ASA_2633 PF01571 Aminomethyltransferase folate-binding domain ASA_2633 PF08669 Glycine cleavage T-protein C-terminal barrel domain ASA_2634 PF01494 FAD binding domain ASA_2635 PF01494 FAD binding domain ASA_2636 PF03695 Uncharacterised protein family (UPF0149) ASA_2637 PF05164 Cell division protein ZapA ASA_2640 PF02634 FdhD/NarQ family ASA_2641 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2641 PF03466 LysR substrate binding domain ASA_2642 PF07690 Major Facilitator Superfamily ASA_2643 PF00005 ABC transporter ASA_2644 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2644 PF12911 N-terminal TM domain of oligopeptide transport permease C ASA_2645 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2647 PF02798 Glutathione S-transferase, N-terminal domain ASA_2647 PF00043 Glutathione S-transferase, C-terminal domain ASA_2649 PF00459 Inositol monophosphatase family ASA_2650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_2650 PF00672 HAMP domain ASA_2651 PF02535 ZIP Zinc transporter ASA_2653 PF01048 Phosphorylase superfamily ASA_2655 PF01497 Periplasmic binding protein ASA_2658 PF02561 Flagellar protein FliS ASA_2659 PF07195 Flagellar hook-associated protein 2 C-terminus ASA_2659 PF07196 Flagellin hook IN motif ASA_2659 PF02465 Flagellar hook-associated protein 2 N-terminus ASA_2661 PF00700 Bacterial flagellin C-terminal helical region ASA_2661 PF00669 Bacterial flagellin N-terminal helical region ASA_2662 PF00669 Bacterial flagellin N-terminal helical region ASA_2662 PF07196 Flagellin hook IN motif ASA_2662 PF00700 Bacterial flagellin C-terminal helical region ASA_2663 PF03458 UPF0126 domain ASA_2665 PF02926 THUMP domain ASA_2665 PF02568 Thiamine biosynthesis protein (ThiI) ASA_2667 PF00905 Penicillin binding protein transpeptidase domain ASA_2667 PF00912 Transglycosylase ASA_2667 PF06832 Penicillin-Binding Protein C-terminus Family ASA_2668 PF07703 Alpha-2-macroglobulin bait region domain ASA_2668 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ASA_2668 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ASA_2668 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ASA_2668 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ASA_2668 PF17962 Bacterial macroglobulin domain 6 ASA_2668 PF01835 MG2 domain ASA_2668 PF07678 A-macroglobulin TED domain ASA_2668 PF00207 Alpha-2-macroglobulin family ASA_2671 PF04055 Radical SAM superfamily ASA_2674 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2675 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2676 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_2677 PF00005 ABC transporter ASA_2678 PF03956 Lysine exporter LysO ASA_2679 PF04336 Acyl carrier protein phosphodiesterase ASA_2681 PF03960 ArsC family ASA_2683 PF07720 Tetratricopeptide repeat ASA_2683 PF01435 Peptidase family M48 ASA_2684 PF01206 Sulfurtransferase TusA ASA_2685 PF01594 AI-2E family transporter ASA_2686 PF00561 alpha/beta hydrolase fold ASA_2687 PF03976 Polyphosphate kinase 2 (PPK2) ASA_2688 PF08402 TOBE domain ASA_2688 PF00005 ABC transporter ASA_2689 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2690 PF14785 Maltose transport system permease protein MalF P2 domain ASA_2690 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2691 PF01547 Bacterial extracellular solute-binding protein ASA_2692 PF04245 37-kD nucleoid-associated bacterial protein ASA_2693 PF07208 Protein of unknown function (DUF1414) ASA_2694 PF00884 Sulfatase ASA_2694 PF11893 Domain of unknown function (DUF3413) ASA_2695 PF00593 TonB dependent receptor ASA_2695 PF07715 TonB-dependent Receptor Plug Domain ASA_2696 PF00326 Prolyl oligopeptidase family ASA_2696 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ASA_2700 PF03974 Ecotin ASA_2701 PF04219 Protein of unknown function, DUF ASA_2702 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2702 PF03466 LysR substrate binding domain ASA_2703 PF02153 Prephenate dehydrogenase ASA_2703 PF01817 Chorismate mutase type II ASA_2704 PF00793 DAHP synthetase I family ASA_2705 PF03009 Glycerophosphoryl diester phosphodiesterase family ASA_2706 PF01266 FAD dependent oxidoreductase ASA_2706 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ASA_2707 PF00455 DeoR C terminal sensor domain ASA_2707 PF08220 DeoR-like helix-turn-helix domain ASA_2708 PF07690 Major Facilitator Superfamily ASA_2709 PF00230 Major intrinsic protein ASA_2710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASA_2710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASA_2711 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2711 PF03466 LysR substrate binding domain ASA_2716 PF03992 Antibiotic biosynthesis monooxygenase ASA_2717 PF00248 Aldo/keto reductase family ASA_2718 PF07690 Major Facilitator Superfamily ASA_2720 PF02322 Cytochrome bd terminal oxidase subunit II ASA_2721 PF01654 Cytochrome bd terminal oxidase subunit I ASA_2722 PF00155 Aminotransferase class I and II ASA_2722 PF00392 Bacterial regulatory proteins, gntR family ASA_2723 PF04391 Protein of unknown function (DUF533) ASA_2725 PF10689 Protein of unknown function (DUF2496) ASA_2727 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2727 PF03466 LysR substrate binding domain ASA_2729 PF07690 Major Facilitator Superfamily ASA_2730 PF00849 RNA pseudouridylate synthase ASA_2730 PF01479 S4 domain ASA_2731 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ASA_2731 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ASA_2733 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ASA_2736 PF00300 Histidine phosphatase superfamily (branch 1) ASA_2740 PF17944 Arginine decarboxylase C-terminal helical extension ASA_2740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ASA_2740 PF17810 Arginine decarboxylase helical bundle domain ASA_2741 PF01546 Peptidase family M20/M25/M40 ASA_2741 PF07687 Peptidase dimerisation domain ASA_2746 PF04264 YceI-like domain ASA_2747 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2747 PF03466 LysR substrate binding domain ASA_2749 PF01268 Formate--tetrahydrofolate ligase ASA_2750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_2750 PF17200 Single Cache domain 2 ASA_2750 PF00672 HAMP domain ASA_2752 PF01227 GTP cyclohydrolase I ASA_2753 PF03453 MoeA N-terminal region (domain I and II) ASA_2753 PF00994 Probable molybdopterin binding domain ASA_2753 PF03454 MoeA C-terminal region (domain IV) ASA_2754 PF00899 ThiF family ASA_2755 PF06291 Bor protein ASA_2756 PF06291 Bor protein ASA_2758 PF06406 StbA protein ASA_2759 PF00561 alpha/beta hydrolase fold ASA_2760 PF00005 ABC transporter ASA_2760 PF03459 TOBE domain ASA_2761 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2763 PF02391 MoaE protein ASA_2764 PF02597 ThiS family ASA_2765 PF01967 MoaC family ASA_2766 PF00994 Probable molybdopterin binding domain ASA_2767 PF03264 NapC/NirT cytochrome c family, N-terminal region ASA_2768 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ASA_2769 PF13237 4Fe-4S dicluster domain ASA_2769 PF12801 4Fe-4S binding domain ASA_2770 PF12800 4Fe-4S binding domain ASA_2770 PF12838 4Fe-4S dicluster domain ASA_2771 PF01568 Molydopterin dinucleotide binding domain ASA_2771 PF10518 TAT (twin-arginine translocation) pathway signal sequence ASA_2771 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ASA_2771 PF00384 Molybdopterin oxidoreductase ASA_2773 PF12838 4Fe-4S dicluster domain ASA_2773 PF13187 4Fe-4S dicluster domain ASA_2774 PF04055 Radical SAM superfamily ASA_2774 PF06463 Molybdenum Cofactor Synthesis C ASA_2775 PF00672 HAMP domain ASA_2775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_2775 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ASA_2775 PF07730 Histidine kinase ASA_2776 PF00072 Response regulator receiver domain ASA_2776 PF00196 Bacterial regulatory proteins, luxR family ASA_2778 PF00072 Response regulator receiver domain ASA_2778 PF09456 RcsC Alpha-Beta-Loop (ABL) ASA_2778 PF00512 His Kinase A (phospho-acceptor) domain ASA_2778 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_2780 PF01933 Uncharacterised protein family UPF0052 ASA_2782 PF13230 Glutamine amidotransferases class-II ASA_2783 PF13580 SIS domain ASA_2784 PF02770 Acyl-CoA dehydrogenase, middle domain ASA_2784 PF09317 Domain of unknown function (DUF1974) ASA_2784 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ASA_2784 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ASA_2785 PF11849 Domain of unknown function (DUF3369) ASA_2787 PF00929 Exonuclease ASA_2788 PF00075 RNase H ASA_2789 PF08241 Methyltransferase domain ASA_2790 PF00753 Metallo-beta-lactamase superfamily ASA_2790 PF16123 Hydroxyacylglutathione hydrolase C-terminus ASA_2791 PF01464 Transglycosylase SLT domain ASA_2791 PF01476 LysM domain ASA_2792 PF03372 Endonuclease/Exonuclease/phosphatase family ASA_2794 PF03061 Thioesterase superfamily ASA_2796 PF00356 Bacterial regulatory proteins, lacI family ASA_2797 PF14718 Soluble lytic murein transglycosylase L domain ASA_2797 PF01464 Transglycosylase SLT domain ASA_2798 PF00563 EAL domain ASA_2798 PF00990 Diguanylate cyclase, GGDEF domain ASA_2798 PF03707 Bacterial signalling protein N terminal repeat ASA_2799 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ASA_2802 PF04357 TamB, inner membrane protein subunit of TAM complex ASA_2803 PF07244 Surface antigen variable number repeat ASA_2803 PF17243 POTRA domain TamA domain 1 ASA_2803 PF01103 Surface antigen ASA_2806 PF01625 Peptide methionine sulfoxide reductase ASA_2808 PF02627 Carboxymuconolactone decarboxylase family ASA_2809 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASA_2809 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_2809 PF00403 Heavy-metal-associated domain ASA_2810 PF13416 Bacterial extracellular solute-binding protein ASA_2811 PF00528 Binding-protein-dependent transport system inner membrane component ASA_2812 PF00005 ABC transporter ASA_2813 PF01066 CDP-alcohol phosphatidyltransferase ASA_2814 PF13406 Transglycosylase SLT domain ASA_2815 PF01047 MarR family ASA_2817 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASA_2817 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASA_2817 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASA_2817 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASA_2818 PF17206 SeqA protein N-terminal domain ASA_2818 PF03925 SeqA protein C-terminal domain ASA_2819 PF12697 Alpha/beta hydrolase family ASA_2821 PF01402 Ribbon-helix-helix protein, copG family ASA_2822 PF00258 Flavodoxin ASA_2824 PF01475 Ferric uptake regulator family ASA_2825 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ASA_2825 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASA_2826 PF03173 Putative carbohydrate binding domain ASA_2826 PF00728 Glycosyl hydrolase family 20, catalytic domain ASA_2826 PF02838 Glycosyl hydrolase family 20, domain 2 ASA_2826 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ASA_2827 PF02378 Phosphotransferase system, EIIC ASA_2827 PF00367 phosphotransferase system, EIIB ASA_2827 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASA_2828 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ASA_2829 PF01979 Amidohydrolase family ASA_2830 PF01047 MarR family ASA_2830 PF00480 ROK family ASA_2832 PF13333 Integrase core domain ASA_2832 PF13276 HTH-like domain ASA_2832 PF00665 Integrase core domain ASA_2833 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ASA_2833 PF01648 4'-phosphopantetheinyl transferase superfamily ASA_2835 PF13439 Glycosyltransferase Family 4 ASA_2835 PF00534 Glycosyl transferases group 1 ASA_2839 PF01695 IstB-like ATP binding protein ASA_2840 PF00665 Integrase core domain ASA_2841 PF00728 Glycosyl hydrolase family 20, catalytic domain ASA_2841 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ASA_2841 PF03173 Putative carbohydrate binding domain ASA_2841 PF02838 Glycosyl hydrolase family 20, domain 2 ASA_2842 PF00884 Sulfatase ASA_2842 PF08019 Phosphoethanolamine transferase EptA/EptB ASA_2843 PF01709 Transcriptional regulator ASA_2844 PF01336 OB-fold nucleic acid binding domain ASA_2844 PF00152 tRNA synthetases class II (D, K and N) ASA_2844 PF02938 GAD domain ASA_2845 PF01904 Protein of unknown function DUF72 ASA_2846 PF13649 Methyltransferase domain ASA_2847 PF08003 Protein of unknown function (DUF1698) ASA_2851 PF10417 C-terminal domain of 1-Cys peroxiredoxin ASA_2851 PF00578 AhpC/TSA family ASA_2852 PF13592 Winged helix-turn helix ASA_2852 PF13358 DDE superfamily endonuclease ASA_2853 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2853 PF03466 LysR substrate binding domain ASA_2854 PF07968 Leukocidin/Hemolysin toxin family ASA_2854 PF12563 Hemolytic toxin N terminal ASA_2855 PF00877 NlpC/P60 family ASA_2857 PF00171 Aldehyde dehydrogenase family ASA_2858 PF00440 Bacterial regulatory proteins, tetR family ASA_2858 PF17932 Tetracyclin repressor-like, C-terminal domain ASA_2860 PF00465 Iron-containing alcohol dehydrogenase ASA_2862 PF00291 Pyridoxal-phosphate dependent enzyme ASA_2865 PF01740 STAS domain ASA_2865 PF00916 Sulfate permease family ASA_2866 PF01554 MatE ASA_2868 PF04325 Protein of unknown function (DUF465) ASA_2871 PF03473 MOSC domain ASA_2871 PF03476 MOSC N-terminal beta barrel domain ASA_2871 PF00111 2Fe-2S iron-sulfur cluster binding domain ASA_2871 PF03476 MOSC N-terminal beta barrel domain ASA_2871 PF00111 2Fe-2S iron-sulfur cluster binding domain ASA_2871 PF03473 MOSC domain ASA_2872 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_2872 PF08447 PAS fold ASA_2872 PF13426 PAS domain ASA_2873 PF01435 Peptidase family M48 ASA_2875 PF12697 Alpha/beta hydrolase family ASA_2875 PF08241 Methyltransferase domain ASA_2876 PF00155 Aminotransferase class I and II ASA_2877 PF06968 Biotin and Thiamin Synthesis associated domain ASA_2877 PF04055 Radical SAM superfamily ASA_2878 PF00202 Aminotransferase class-III ASA_2881 PF00152 tRNA synthetases class II (D, K and N) ASA_2881 PF01336 OB-fold nucleic acid binding domain ASA_2882 PF03605 Anaerobic c4-dicarboxylate membrane transporter ASA_2885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2885 PF03466 LysR substrate binding domain ASA_2886 PF03960 ArsC family ASA_2887 PF01546 Peptidase family M20/M25/M40 ASA_2887 PF07687 Peptidase dimerisation domain ASA_2888 PF02557 D-alanyl-D-alanine carboxypeptidase ASA_2890 PF02080 TrkA-C domain ASA_2890 PF00999 Sodium/hydrogen exchanger family ASA_2890 PF03471 Transporter associated domain ASA_2892 PF00999 Sodium/hydrogen exchanger family ASA_2892 PF03471 Transporter associated domain ASA_2892 PF02080 TrkA-C domain ASA_2894 PF01810 LysE type translocator ASA_2895 PF12729 Four helix bundle sensory module for signal transduction ASA_2895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_2895 PF00672 HAMP domain ASA_2896 PF07509 Protein of unknown function (DUF1523) ASA_2899 PF01156 Inosine-uridine preferring nucleoside hydrolase ASA_2900 PF00849 RNA pseudouridylate synthase ASA_2901 PF01048 Phosphorylase superfamily ASA_2902 PF00465 Iron-containing alcohol dehydrogenase ASA_2909 PF00437 Type II/IV secretion system protein ASA_2910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ASA_2912 PF04972 BON domain ASA_2912 PF00263 Bacterial type II and III secretion system protein ASA_2912 PF13629 Pilus formation protein N terminal region ASA_2918 PF04355 SmpA / OmlA family ASA_2919 PF13460 NAD(P)H-binding ASA_2921 PF03364 Polyketide cyclase / dehydrase and lipid transport ASA_2922 PF01668 SmpB protein ASA_2926 PF13276 HTH-like domain ASA_2926 PF00665 Integrase core domain ASA_2926 PF13333 Integrase core domain ASA_2938 PF03466 LysR substrate binding domain ASA_2938 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_2939 PF02447 GntP family permease ASA_2940 PF00291 Pyridoxal-phosphate dependent enzyme ASA_2942 PF00180 Isocitrate/isopropylmalate dehydrogenase ASA_2943 PF12833 Helix-turn-helix domain ASA_2944 PF01238 Phosphomannose isomerase type I ASA_2950 PF00155 Aminotransferase class I and II ASA_2951 PF00367 phosphotransferase system, EIIB ASA_2951 PF02378 Phosphotransferase system, EIIC ASA_2952 PF00356 Bacterial regulatory proteins, lacI family ASA_2952 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ASA_2955 PF00561 alpha/beta hydrolase fold ASA_2956 PF07690 Major Facilitator Superfamily ASA_2957 PF01040 UbiA prenyltransferase family ASA_2958 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ASA_2959 PF00510 Cytochrome c oxidase subunit III ASA_2960 PF00115 Cytochrome C and Quinol oxidase polypeptide I ASA_2961 PF06481 COX Aromatic Rich Motif ASA_2961 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ASA_2963 PF00034 Cytochrome c ASA_2963 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ASA_2965 PF01156 Inosine-uridine preferring nucleoside hydrolase ASA_2968 PF00127 Copper binding proteins, plastocyanin/azurin family ASA_2969 PF02424 ApbE family ASA_2972 PF03372 Endonuclease/Exonuclease/phosphatase family ASA_2973 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_2974 PF00873 AcrB/AcrD/AcrF family ASA_2977 PF00529 HlyD membrane-fusion protein of T1SS ASA_2977 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_2978 PF00873 AcrB/AcrD/AcrF family ASA_2980 PF03099 Biotin/lipoate A/B protein ligase family ASA_2980 PF10437 Bacterial lipoate protein ligase C-terminus ASA_2981 PF00563 EAL domain ASA_2981 PF00990 Diguanylate cyclase, GGDEF domain ASA_2981 PF03707 Bacterial signalling protein N terminal repeat ASA_2982 PF00873 AcrB/AcrD/AcrF family ASA_2985 PF04143 Sulphur transport ASA_2989 PF02308 MgtC family ASA_2990 PF13407 Periplasmic binding protein domain ASA_2990 PF00356 Bacterial regulatory proteins, lacI family ASA_2991 PF00251 Glycosyl hydrolases family 32 N-terminal domain ASA_2991 PF08244 Glycosyl hydrolases family 32 C terminal ASA_2992 PF02378 Phosphotransferase system, EIIC ASA_2992 PF00367 phosphotransferase system, EIIB ASA_2993 PF00294 pfkB family carbohydrate kinase ASA_2994 PF02264 LamB porin ASA_2994 PF11471 Maltoporin periplasmic N-terminal extension ASA_2995 PF00684 DnaJ central domain ASA_2995 PF00226 DnaJ domain ASA_2995 PF01556 DnaJ C terminal domain ASA_2996 PF00012 Hsp70 protein ASA_2997 PF01025 GrpE ASA_2998 PF01513 ATP-NAD kinase ASA_2999 PF02463 RecF/RecN/SMC N terminal domain ASA_3001 PF02833 DHHA2 domain ASA_3001 PF01368 DHH family ASA_3003 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_3004 PF00005 ABC transporter ASA_3004 PF02687 FtsX-like permease family ASA_3004 PF12704 MacB-like periplasmic core domain ASA_3005 PF02321 Outer membrane efflux protein ASA_3006 PF04954 Siderophore-interacting protein ASA_3006 PF08021 Siderophore-interacting FAD-binding domain ASA_3007 PF00793 DAHP synthetase I family ASA_3009 PF00872 Transposase, Mutator family ASA_3010 PF00816 H-NS histone family ASA_3015 PF12833 Helix-turn-helix domain ASA_3015 PF07883 Cupin domain ASA_3018 PF01266 FAD dependent oxidoreductase ASA_3019 PF07883 Cupin domain ASA_3019 PF01381 Helix-turn-helix ASA_3020 PF00171 Aldehyde dehydrogenase family ASA_3021 PF00202 Aminotransferase class-III ASA_3022 PF00324 Amino acid permease ASA_3023 PF00324 Amino acid permease ASA_3024 PF02690 Na+/Pi-cotransporter ASA_3025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ASA_3025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASA_3026 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ASA_3029 PF01048 Phosphorylase superfamily ASA_3032 PF01797 Transposase IS200 like ASA_3034 PF13592 Winged helix-turn helix ASA_3034 PF13358 DDE superfamily endonuclease ASA_3037 PF13358 DDE superfamily endonuclease ASA_3037 PF13592 Winged helix-turn helix ASA_3038 PF14821 Threonine synthase N terminus ASA_3038 PF00291 Pyridoxal-phosphate dependent enzyme ASA_3039 PF08544 GHMP kinases C terminal ASA_3039 PF00288 GHMP kinases N terminal domain ASA_3040 PF03447 Homoserine dehydrogenase, NAD binding domain ASA_3040 PF00742 Homoserine dehydrogenase ASA_3040 PF13840 ACT domain ASA_3040 PF01842 ACT domain ASA_3040 PF00696 Amino acid kinase family ASA_3041 PF00588 SpoU rRNA Methylase family ASA_3042 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ASA_3045 PF03737 Aldolase/RraA ASA_3047 PF00072 Response regulator receiver domain ASA_3047 PF00486 Transcriptional regulatory protein, C terminal ASA_3050 PF00005 ABC transporter ASA_3050 PF00664 ABC transporter transmembrane region ASA_3051 PF00664 ABC transporter transmembrane region ASA_3051 PF00005 ABC transporter ASA_3055 PF18389 TrmO C-terminal domain ASA_3055 PF01980 tRNA-methyltransferase O ASA_3056 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ASA_3056 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ASA_3059 PF00291 Pyridoxal-phosphate dependent enzyme ASA_3060 PF00381 PTS HPr component phosphorylation site ASA_3061 PF05524 PEP-utilising enzyme, N-terminal ASA_3061 PF02896 PEP-utilising enzyme, TIM barrel domain ASA_3061 PF00391 PEP-utilising enzyme, mobile domain ASA_3062 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASA_3063 PF08448 PAS fold ASA_3063 PF00990 Diguanylate cyclase, GGDEF domain ASA_3065 PF01292 Prokaryotic cytochrome b561 ASA_3067 PF13476 AAA domain ASA_3068 PF00149 Calcineurin-like phosphoesterase ASA_3068 PF12320 Type 5 capsule protein repressor C-terminal domain ASA_3070 PF04381 Putative exonuclease, RdgC ASA_3073 PF04151 Bacterial pre-peptidase C-terminal domain ASA_3073 PF04389 Peptidase family M28 ASA_3074 PF00224 Pyruvate kinase, barrel domain ASA_3074 PF02887 Pyruvate kinase, alpha/beta domain ASA_3075 PF12794 Mechanosensitive ion channel inner membrane domain 1 ASA_3075 PF12795 Mechanosensitive ion channel porin domain ASA_3075 PF00924 Mechanosensitive ion channel ASA_3080 PF13592 Winged helix-turn helix ASA_3080 PF13358 DDE superfamily endonuclease ASA_3082 PF02634 FdhD/NarQ family ASA_3084 PF00989 PAS fold ASA_3084 PF00512 His Kinase A (phospho-acceptor) domain ASA_3084 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_3086 PF12849 PBP superfamily domain ASA_3087 PF00528 Binding-protein-dependent transport system inner membrane component ASA_3088 PF00005 ABC transporter ASA_3089 PF12804 MobA-like NTP transferase domain ASA_3090 PF03454 MoeA C-terminal region (domain IV) ASA_3090 PF03453 MoeA N-terminal region (domain I and II) ASA_3090 PF00994 Probable molybdopterin binding domain ASA_3091 PF04632 Fusaric acid resistance protein family ASA_3093 PF08447 PAS fold ASA_3093 PF13426 PAS domain ASA_3093 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3095 PF10725 Protein of unknown function (DUF2517) ASA_3099 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_3099 PF00512 His Kinase A (phospho-acceptor) domain ASA_3099 PF00072 Response regulator receiver domain ASA_3099 PF09308 LuxQ, periplasmic ASA_3100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_3101 PF00528 Binding-protein-dependent transport system inner membrane component ASA_3102 PF00528 Binding-protein-dependent transport system inner membrane component ASA_3102 PF12911 N-terminal TM domain of oligopeptide transport permease C ASA_3103 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASA_3103 PF00005 ABC transporter ASA_3104 PF00005 ABC transporter ASA_3104 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASA_3106 PF01869 BadF/BadG/BcrA/BcrD ATPase family ASA_3107 PF02838 Glycosyl hydrolase family 20, domain 2 ASA_3107 PF00728 Glycosyl hydrolase family 20, catalytic domain ASA_3108 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3108 PF08447 PAS fold ASA_3111 PF01131 DNA topoisomerase ASA_3111 PF01751 Toprim domain ASA_3111 PF08272 Topoisomerase I zinc-ribbon-like ASA_3111 PF01396 Topoisomerase DNA binding C4 zinc finger ASA_3112 PF04996 Succinylarginine dihydrolase ASA_3113 PF01343 Peptidase family S49 ASA_3113 PF08496 Peptidase family S49 N-terminal ASA_3114 PF00106 short chain dehydrogenase ASA_3115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3115 PF03466 LysR substrate binding domain ASA_3116 PF07690 Major Facilitator Superfamily ASA_3117 PF00155 Aminotransferase class I and II ASA_3119 PF03466 LysR substrate binding domain ASA_3119 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3121 PF01161 Phosphatidylethanolamine-binding protein ASA_3123 PF00128 Alpha amylase, catalytic domain ASA_3125 PF00196 Bacterial regulatory proteins, luxR family ASA_3125 PF00072 Response regulator receiver domain ASA_3129 PF02080 TrkA-C domain ASA_3129 PF02254 TrkA-N domain ASA_3129 PF00999 Sodium/hydrogen exchanger family ASA_3130 PF07694 5TMR of 5TMR-LYT ASA_3130 PF00990 Diguanylate cyclase, GGDEF domain ASA_3131 PF09179 TilS substrate binding domain ASA_3131 PF11734 TilS substrate C-terminal domain ASA_3131 PF01171 PP-loop family ASA_3132 PF05649 Peptidase family M13 ASA_3132 PF01431 Peptidase family M13 ASA_3134 PF16326 ABC transporter C-terminal domain ASA_3134 PF12848 ABC transporter ASA_3134 PF00005 ABC transporter ASA_3135 PF13302 Acetyltransferase (GNAT) domain ASA_3136 PF13520 Amino acid permease ASA_3138 PF03466 LysR substrate binding domain ASA_3138 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3140 PF08543 Phosphomethylpyrimidine kinase ASA_3141 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ASA_3141 PF01276 Orn/Lys/Arg decarboxylase, major domain ASA_3141 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ASA_3142 PF13520 Amino acid permease ASA_3143 PF18500 CadC C-terminal domain 1 ASA_3143 PF00486 Transcriptional regulatory protein, C terminal ASA_3144 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ASA_3145 PF02811 PHP domain ASA_3145 PF14579 Helix-hairpin-helix motif ASA_3145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASA_3145 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASA_3145 PF01336 OB-fold nucleic acid binding domain ASA_3146 PF01351 Ribonuclease HII ASA_3147 PF02684 Lipid-A-disaccharide synthetase ASA_3148 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ASA_3148 PF00132 Bacterial transferase hexapeptide (six repeats) ASA_3149 PF07977 FabA-like domain ASA_3150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ASA_3150 PF00132 Bacterial transferase hexapeptide (six repeats) ASA_3151 PF03938 Outer membrane protein (OmpH-like) ASA_3152 PF01103 Surface antigen ASA_3152 PF07244 Surface antigen variable number repeat ASA_3153 PF17820 PDZ domain ASA_3153 PF02163 Peptidase family M50 ASA_3154 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ASA_3154 PF13288 DXP reductoisomerase C-terminal domain ASA_3154 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ASA_3156 PF01255 Putative undecaprenyl diphosphate synthase ASA_3157 PF01765 Ribosome recycling factor ASA_3158 PF00696 Amino acid kinase family ASA_3159 PF00889 Elongation factor TS ASA_3160 PF00318 Ribosomal protein S2 ASA_3162 PF00557 Metallopeptidase family M24 ASA_3163 PF01842 ACT domain ASA_3163 PF08335 GlnD PII-uridylyltransferase ASA_3163 PF01909 Nucleotidyltransferase domain ASA_3163 PF01966 HD domain ASA_3164 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ASA_3164 PF14602 Hexapeptide repeat of succinyl-transferase ASA_3164 PF00132 Bacterial transferase hexapeptide (six repeats) ASA_3165 PF11944 Protein of unknown function (DUF3461) ASA_3166 PF00367 phosphotransferase system, EIIB ASA_3166 PF02378 Phosphotransferase system, EIIC ASA_3167 PF07148 Maltose operon periplasmic protein precursor (MalM) ASA_3168 PF02264 LamB porin ASA_3169 PF00258 Flavodoxin ASA_3170 PF00849 RNA pseudouridylate synthase ASA_3171 PF04287 tRNA pseudouridine synthase C ASA_3176 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) ASA_3177 PF07348 Syd protein (SUKH-2) ASA_3178 PF14489 QueF-like protein ASA_3178 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ASA_3180 PF07694 5TMR of 5TMR-LYT ASA_3180 PF00990 Diguanylate cyclase, GGDEF domain ASA_3181 PF11892 Domain of unknown function (DUF3412) ASA_3181 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ASA_3181 PF03641 Possible lysine decarboxylase ASA_3182 PF01367 5'-3' exonuclease, C-terminal SAM fold ASA_3182 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ASA_3183 PF00180 Isocitrate/isopropylmalate dehydrogenase ASA_3183 PF18324 Hypothetical protein TT1725 ASA_3185 PF01728 FtsJ-like methyltransferase ASA_3185 PF18125 RlmM ferredoxin-like domain ASA_3186 PF04241 Protein of unknown function (DUF423) ASA_3188 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3188 PF03466 LysR substrate binding domain ASA_3189 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3189 PF00672 HAMP domain ASA_3190 PF11799 impB/mucB/samB family C-terminal domain ASA_3190 PF11798 IMS family HHH motif ASA_3190 PF00817 impB/mucB/samB family ASA_3193 PF02424 ApbE family ASA_3194 PF00111 2Fe-2S iron-sulfur cluster binding domain ASA_3194 PF00175 Oxidoreductase NAD-binding domain ASA_3194 PF00970 Oxidoreductase FAD-binding domain ASA_3195 PF02508 Rnf-Nqr subunit, membrane protein ASA_3196 PF02508 Rnf-Nqr subunit, membrane protein ASA_3197 PF04205 FMN-binding domain ASA_3198 PF03116 NQR2, RnfD, RnfE family ASA_3199 PF11973 NQRA C-terminal domain ASA_3199 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ASA_3200 PF01722 BolA-like protein ASA_3201 PF05175 Methyltransferase small domain ASA_3203 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ASA_3205 PF07690 Major Facilitator Superfamily ASA_3206 PF03502 Nucleoside-specific channel-forming protein, Tsx ASA_3207 PF04461 Protein of unknown function (DUF520) ASA_3208 PF02558 Ketopantoate reductase PanE/ApbA ASA_3208 PF08546 Ketopantoate reductase PanE/ApbA C terminal ASA_3209 PF01965 DJ-1/PfpI family ASA_3211 PF03306 Alpha-acetolactate decarboxylase ASA_3212 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3212 PF03466 LysR substrate binding domain ASA_3213 PF10091 Putative glucoamylase ASA_3213 PF06165 Glycosyltransferase family 36 ASA_3213 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ASA_3216 PF06965 Na+/H+ antiporter 1 ASA_3216 PF13462 Thioredoxin ASA_3217 PF16363 GDP-mannose 4,6 dehydratase ASA_3218 PF00175 Oxidoreductase NAD-binding domain ASA_3218 PF00111 2Fe-2S iron-sulfur cluster binding domain ASA_3218 PF00970 Oxidoreductase FAD-binding domain ASA_3219 PF03063 Prismane/CO dehydrogenase family ASA_3220 PF00210 Ferritin-like domain ASA_3228 PF00106 short chain dehydrogenase ASA_3230 PF03441 FAD binding domain of DNA photolyase ASA_3230 PF00875 DNA photolyase ASA_3231 PF13411 MerR HTH family regulatory protein ASA_3232 PF08349 Protein of unknown function (DUF1722) ASA_3238 PF00800 Prephenate dehydratase ASA_3238 PF01817 Chorismate mutase type II ASA_3243 PF07995 Glucose / Sorbosone dehydrogenase ASA_3245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3246 PF03573 outer membrane porin, OprD family ASA_3247 PF00106 short chain dehydrogenase ASA_3252 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ASA_3254 PF02805 Metal binding domain of Ada ASA_3254 PF12833 Helix-turn-helix domain ASA_3254 PF00730 HhH-GPD superfamily base excision DNA repair protein ASA_3254 PF06029 AlkA N-terminal domain ASA_3255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ASA_3255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ASA_3257 PF06906 Protein of unknown function (DUF1272) ASA_3260 PF01810 LysE type translocator ASA_3261 PF03466 LysR substrate binding domain ASA_3261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3262 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ASA_3262 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ASA_3263 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3263 PF00672 HAMP domain ASA_3263 PF02743 Cache domain ASA_3266 PF02895 Signal transducing histidine kinase, homodimeric domain ASA_3266 PF01627 Hpt domain ASA_3266 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_3266 PF01584 CheW-like domain ASA_3268 PF01584 CheW-like domain ASA_3269 PF00672 HAMP domain ASA_3269 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3269 PF02203 Tar ligand binding domain homologue ASA_3270 PF03705 CheR methyltransferase, all-alpha domain ASA_3270 PF01739 CheR methyltransferase, SAM binding domain ASA_3271 PF03975 CheD chemotactic sensory transduction ASA_3272 PF01339 CheB methylesterase ASA_3272 PF00072 Response regulator receiver domain ASA_3273 PF00266 Aminotransferase class-V ASA_3277 PF00072 Response regulator receiver domain ASA_3277 PF01627 Hpt domain ASA_3277 PF00512 His Kinase A (phospho-acceptor) domain ASA_3277 PF00672 HAMP domain ASA_3277 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ASA_3277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_3283 PF00990 Diguanylate cyclase, GGDEF domain ASA_3283 PF00989 PAS fold ASA_3283 PF00563 EAL domain ASA_3283 PF01590 GAF domain ASA_3285 PF12838 4Fe-4S dicluster domain ASA_3286 PF00842 Alanine racemase, C-terminal domain ASA_3286 PF01168 Alanine racemase, N-terminal domain ASA_3287 PF03796 DnaB-like helicase C terminal domain ASA_3287 PF00772 DnaB-like helicase N terminal domain ASA_3291 PF00149 Calcineurin-like phosphoesterase ASA_3291 PF02872 5'-nucleotidase, C-terminal domain ASA_3295 PF00072 Response regulator receiver domain ASA_3295 PF00158 Sigma-54 interaction domain ASA_3295 PF02954 Bacterial regulatory protein, Fis family ASA_3296 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ASA_3296 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASA_3298 PF04102 SlyX ASA_3299 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASA_3300 PF09526 Probable metal-binding protein (DUF2387) ASA_3302 PF00072 Response regulator receiver domain ASA_3302 PF01584 CheW-like domain ASA_3303 PF00561 alpha/beta hydrolase fold ASA_3304 PF00360 Phytochrome region ASA_3304 PF00990 Diguanylate cyclase, GGDEF domain ASA_3304 PF01590 GAF domain ASA_3304 PF00563 EAL domain ASA_3305 PF06794 Uncharacterised protein family (UPF0270) ASA_3306 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ASA_3306 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ASA_3306 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ASA_3307 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ASA_3308 PF00535 Glycosyl transferase family 2 ASA_3310 PF01522 Polysaccharide deacetylase ASA_3311 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ASA_3312 PF00892 EamA-like transporter family ASA_3314 PF00485 Phosphoribulokinase / Uridine kinase family ASA_3317 PF02566 OsmC-like protein ASA_3318 PF13545 Crp-like helix-turn-helix domain ASA_3318 PF00027 Cyclic nucleotide-binding domain ASA_3319 PF08241 Methyltransferase domain ASA_3320 PF18416 N-acetylglucosamine binding protein domain 2 ASA_3320 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ASA_3321 PF12561 ToxR activated gene A lipoprotein domain ASA_3321 PF17945 Beta/Gamma crystallin ASA_3325 PF13443 Cro/C1-type HTH DNA-binding domain ASA_3327 PF12832 MFS_1 like family ASA_3328 PF00593 TonB dependent receptor ASA_3328 PF07715 TonB-dependent Receptor Plug Domain ASA_3332 PF01243 Pyridoxamine 5'-phosphate oxidase ASA_3333 PF06228 Haem utilisation ChuX/HutX ASA_3335 PF01032 FecCD transport family ASA_3336 PF00005 ABC transporter ASA_3338 PF01370 NAD dependent epimerase/dehydratase family ASA_3341 PF00005 ABC transporter ASA_3341 PF12848 ABC transporter ASA_3344 PF00226 DnaJ domain ASA_3344 PF05099 Tellurite resistance protein TerB ASA_3345 PF00483 Nucleotidyl transferase ASA_3346 PF01636 Phosphotransferase enzyme family ASA_3347 PF04453 LPS transport system D ASA_3347 PF03968 OstA-like protein ASA_3348 PF00639 PPIC-type PPIASE domain ASA_3348 PF09312 SurA N-terminal domain ASA_3349 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ASA_3350 PF00398 Ribosomal RNA adenine dimethylase ASA_3351 PF04379 ApaG domain ASA_3352 PF00149 Calcineurin-like phosphoesterase ASA_3355 PF00296 Luciferase-like monooxygenase ASA_3359 PF13193 AMP-binding enzyme C-terminal domain ASA_3359 PF00501 AMP-binding enzyme ASA_3361 PF01926 50S ribosome-binding GTPase ASA_3361 PF01018 GTP1/OBG ASA_3362 PF01016 Ribosomal L27 protein ASA_3363 PF00829 Ribosomal prokaryotic L21 protein ASA_3364 PF00348 Polyprenyl synthetase ASA_3365 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ASA_3366 PF01145 SPFH domain / Band 7 family ASA_3367 PF12221 Bacterial membrane protein N terminal ASA_3367 PF01145 SPFH domain / Band 7 family ASA_3368 PF16360 GTP-binding GTPase Middle Region ASA_3368 PF13167 GTP-binding GTPase N-terminal ASA_3368 PF01926 50S ribosome-binding GTPase ASA_3369 PF17209 Hfq protein ASA_3371 PF08676 MutL C terminal dimerisation domain ASA_3371 PF01119 DNA mismatch repair protein, C-terminal domain ASA_3372 PF01520 N-acetylmuramoyl-L-alanine amidase ASA_3373 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ASA_3375 PF08331 Domain of unknown function (DUF1730) ASA_3376 PF00480 ROK family ASA_3378 PF09383 NIL domain ASA_3378 PF00005 ABC transporter ASA_3379 PF00528 Binding-protein-dependent transport system inner membrane component ASA_3380 PF03180 NLPA lipoprotein ASA_3381 PF02357 Transcription termination factor nusG ASA_3382 PF12729 Four helix bundle sensory module for signal transduction ASA_3382 PF00672 HAMP domain ASA_3382 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3386 PF01966 HD domain ASA_3387 PF00989 PAS fold ASA_3387 PF00072 Response regulator receiver domain ASA_3387 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_3387 PF00512 His Kinase A (phospho-acceptor) domain ASA_3387 PF18415 Histidine kinase receptor ArcB trans-membrane domain ASA_3387 PF01627 Hpt domain ASA_3392 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3392 PF03466 LysR substrate binding domain ASA_3394 PF01259 SAICAR synthetase ASA_3395 PF06804 NlpB/DapX lipoprotein ASA_3396 PF00701 Dihydrodipicolinate synthetase family ASA_3397 PF01842 ACT domain ASA_3398 PF00578 AhpC/TSA family ASA_3399 PF03887 YfbU domain ASA_3400 PF04217 Protein of unknown function, DUF412 ASA_3401 PF00871 Acetokinase family ASA_3402 PF07085 DRTGG domain ASA_3402 PF01515 Phosphate acetyl/butaryl transferase ASA_3403 PF10369 Small subunit of acetolactate synthase ASA_3404 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASA_3404 PF00205 Thiamine pyrophosphate enzyme, central domain ASA_3404 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASA_3407 PF01569 PAP2 superfamily ASA_3409 PF08502 LeuA allosteric (dimerisation) domain ASA_3409 PF00682 HMGL-like ASA_3410 PF00180 Isocitrate/isopropylmalate dehydrogenase ASA_3411 PF00330 Aconitase family (aconitate hydratase) ASA_3412 PF00694 Aconitase C-terminal domain ASA_3416 PF00528 Binding-protein-dependent transport system inner membrane component ASA_3417 PF00005 ABC transporter ASA_3418 PF13638 PIN domain ASA_3418 PF02562 PhoH-like protein ASA_3420 PF02867 Ribonucleotide reductase, barrel domain ASA_3420 PF08343 Ribonucleotide reductase N-terminal ASA_3420 PF00317 Ribonucleotide reductase, all-alpha domain ASA_3426 PF18339 RapA N-terminal Tudor like domain 1 ASA_3426 PF00271 Helicase conserved C-terminal domain ASA_3426 PF12137 RNA polymerase recycling family C-terminal ASA_3426 PF00176 SNF2 family N-terminal domain ASA_3426 PF18337 RapA N-terminal Tudor like domain ASA_3427 PF00849 RNA pseudouridylate synthase ASA_3429 PF00563 EAL domain ASA_3429 PF00990 Diguanylate cyclase, GGDEF domain ASA_3429 PF03707 Bacterial signalling protein N terminal repeat ASA_3429 PF13188 PAS domain ASA_3431 PF00118 TCP-1/cpn60 chaperonin family ASA_3432 PF00166 Chaperonin 10 Kd subunit ASA_3434 PF04186 FxsA cytoplasmic membrane protein ASA_3435 PF00206 Lyase ASA_3435 PF10415 Fumarase C C-terminus ASA_3436 PF03605 Anaerobic c4-dicarboxylate membrane transporter ASA_3437 PF00267 Gram-negative porin ASA_3438 PF07690 Major Facilitator Superfamily ASA_3439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3439 PF03466 LysR substrate binding domain ASA_3441 PF13302 Acetyltransferase (GNAT) domain ASA_3442 PF13302 Acetyltransferase (GNAT) domain ASA_3445 PF07690 Major Facilitator Superfamily ASA_3446 PF01725 Ham1 family ASA_3447 PF06969 HemN C-terminal domain ASA_3447 PF04055 Radical SAM superfamily ASA_3448 PF03889 Alternative ribosome-rescue factor A ASA_3450 PF13411 MerR HTH family regulatory protein ASA_3451 PF01808 AICARFT/IMPCHase bienzyme ASA_3451 PF02142 MGS-like domain ASA_3452 PF02844 Phosphoribosylglycinamide synthetase, N domain ASA_3452 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ASA_3452 PF02843 Phosphoribosylglycinamide synthetase, C domain ASA_3455 PF00128 Alpha amylase, catalytic domain ASA_3458 PF13592 Winged helix-turn helix ASA_3458 PF13358 DDE superfamily endonuclease ASA_3461 PF04546 Sigma-70, non-essential region ASA_3461 PF03979 Sigma-70 factor, region 1.1 ASA_3461 PF00140 Sigma-70 factor, region 1.2 ASA_3461 PF04542 Sigma-70 region 2 ASA_3461 PF04539 Sigma-70 region 3 ASA_3461 PF04545 Sigma-70, region 4 ASA_3462 PF08275 DNA primase catalytic core, N-terminal domain ASA_3462 PF10410 DnaB-helicase binding domain of primase ASA_3462 PF08278 DNA primase DnaG DnaB-binding ASA_3462 PF01807 CHC2 zinc finger ASA_3463 PF09424 Yqey-like protein ASA_3464 PF01165 Ribosomal protein S21 ASA_3465 PF00814 Glycoprotease family ASA_3466 PF04545 Sigma-70, region 4 ASA_3466 PF04542 Sigma-70 region 2 ASA_3466 PF04539 Sigma-70 region 3 ASA_3466 PF00140 Sigma-70 factor, region 1.2 ASA_3467 PF01551 Peptidase family M23 ASA_3467 PF01476 LysM domain ASA_3468 PF09335 SNARE associated Golgi protein ASA_3470 PF01975 Survival protein SurE ASA_3471 PF01142 tRNA pseudouridine synthase D (TruD) ASA_3472 PF02542 YgbB family ASA_3473 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ASA_3474 PF04977 Septum formation initiator ASA_3475 PF03952 Enolase, N-terminal domain ASA_3475 PF00113 Enolase, C-terminal TIM barrel domain ASA_3476 PF00117 Glutamine amidotransferase class-I ASA_3476 PF06418 CTP synthase N-terminus ASA_3477 PF03819 MazG nucleotide pyrophosphohydrolase domain ASA_3478 PF04607 Region found in RelA / SpoT proteins ASA_3478 PF02824 TGS domain ASA_3478 PF13291 ACT domain ASA_3479 PF05958 tRNA (Uracil-5-)-methyltransferase ASA_3479 PF01938 TRAM domain ASA_3480 PF00512 His Kinase A (phospho-acceptor) domain ASA_3480 PF00672 HAMP domain ASA_3480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ASA_3480 PF00072 Response regulator receiver domain ASA_3480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_3480 PF01627 Hpt domain ASA_3481 PF07308 Protein of unknown function (DUF1456) ASA_3482 PF01510 N-acetylmuramoyl-L-alanine amidase ASA_3483 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ASA_3484 PF02565 Recombination protein O C terminal ASA_3484 PF11967 Recombination protein O N terminal ASA_3485 PF07650 KH domain ASA_3485 PF01926 50S ribosome-binding GTPase ASA_3486 PF00035 Double-stranded RNA binding motif ASA_3486 PF14622 Ribonuclease-III-like ASA_3487 PF10502 Signal peptidase, peptidase S26 ASA_3488 PF06421 GTP-binding protein LepA C-terminus ASA_3488 PF03144 Elongation factor Tu domain 2 ASA_3488 PF00009 Elongation factor Tu GTP binding domain ASA_3488 PF00679 Elongation factor G C-terminus ASA_3490 PF17188 MucB/RseB C-terminal domain ASA_3490 PF03888 MucB/RseB N-terminal domain ASA_3491 PF03873 Anti sigma-E protein RseA, C-terminal domain ASA_3491 PF03872 Anti sigma-E protein RseA, N-terminal domain ASA_3492 PF04542 Sigma-70 region 2 ASA_3492 PF08281 Sigma-70, region 4 ASA_3493 PF02910 Fumarate reductase flavoprotein C-term ASA_3493 PF00890 FAD binding domain ASA_3495 PF03937 Flavinator of succinate dehydrogenase ASA_3496 PF01571 Aminomethyltransferase folate-binding domain ASA_3500 PF03091 CutA1 divalent ion tolerance protein ASA_3501 PF11412 Disulphide bond corrector protein DsbC ASA_3501 PF02683 Cytochrome C biogenesis protein transmembrane region ASA_3503 PF01266 FAD dependent oxidoreductase ASA_3504 PF01116 Fructose-bisphosphate aldolase class-II ASA_3505 PF00162 Phosphoglycerate kinase ASA_3506 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASA_3506 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASA_3507 PF00480 ROK family ASA_3510 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ASA_3513 PF00005 ABC transporter ASA_3517 PF08447 PAS fold ASA_3517 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3518 PF13358 DDE superfamily endonuclease ASA_3518 PF13592 Winged helix-turn helix ASA_3521 PF02080 TrkA-C domain ASA_3521 PF03600 Citrate transporter ASA_3522 PF00009 Elongation factor Tu GTP binding domain ASA_3523 PF01507 Phosphoadenosine phosphosulfate reductase family ASA_3524 PF10414 Sirohaem synthase dimerisation region ASA_3524 PF14824 Sirohaem biosynthesis protein central ASA_3524 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASA_3525 PF16200 C-terminal region of band_7 ASA_3525 PF01145 SPFH domain / Band 7 family ASA_3526 PF01957 NfeD-like C-terminal, partner-binding ASA_3527 PF00571 CBS domain ASA_3527 PF01380 SIS domain ASA_3528 PF00005 ABC transporter ASA_3528 PF12848 ABC transporter ASA_3530 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ASA_3543 PF13592 Winged helix-turn helix ASA_3543 PF13358 DDE superfamily endonuclease ASA_3544 PF13411 MerR HTH family regulatory protein ASA_3546 PF00474 Sodium:solute symporter family ASA_3547 PF17969 L,D-transpeptidase C-terminal domain ASA_3547 PF03734 L,D-transpeptidase catalytic domain ASA_3548 PF00924 Mechanosensitive ion channel ASA_3549 PF00871 Acetokinase family ASA_3550 PF04074 YhcH/YjgK/YiaL ASA_3552 PF01177 Asp/Glu/Hydantoin racemase ASA_3553 PF01810 LysE type translocator ASA_3560 PF00209 Sodium:neurotransmitter symporter family ASA_3562 PF00209 Sodium:neurotransmitter symporter family ASA_3566 PF07690 Major Facilitator Superfamily ASA_3568 PF01037 Lrp/AsnC ligand binding domain ASA_3571 PF01047 MarR family ASA_3572 PF02566 OsmC-like protein ASA_3573 PF00107 Zinc-binding dehydrogenase ASA_3573 PF16884 N-terminal domain of oxidoreductase ASA_3574 PF00293 NUDIX domain ASA_3577 PF08335 GlnD PII-uridylyltransferase ASA_3577 PF03710 Glutamate-ammonia ligase adenylyltransferase ASA_3578 PF00455 DeoR C terminal sensor domain ASA_3578 PF08220 DeoR-like helix-turn-helix domain ASA_3580 PF00106 short chain dehydrogenase ASA_3581 PF03829 PTS system glucitol/sorbitol-specific IIA component ASA_3582 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ASA_3582 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ASA_3583 PF03608 PTS system enzyme II sorbitol-specific factor ASA_3588 PF05170 AsmA family ASA_3589 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ASA_3589 PF00326 Prolyl oligopeptidase family ASA_3590 PF12704 MacB-like periplasmic core domain ASA_3590 PF00005 ABC transporter ASA_3590 PF02687 FtsX-like permease family ASA_3591 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASA_3592 PF00486 Transcriptional regulatory protein, C terminal ASA_3592 PF00072 Response regulator receiver domain ASA_3593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_3593 PF00512 His Kinase A (phospho-acceptor) domain ASA_3593 PF16527 Two-component sensor protein CpxA, periplasmic domain ASA_3593 PF00672 HAMP domain ASA_3594 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ASA_3594 PF09297 NADH pyrophosphatase zinc ribbon domain ASA_3594 PF00293 NUDIX domain ASA_3600 PF03060 Nitronate monooxygenase ASA_3602 PF00445 Ribonuclease T2 family ASA_3606 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase ASA_3609 PF03466 LysR substrate binding domain ASA_3609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3610 PF00270 DEAD/DEAH box helicase ASA_3610 PF00271 Helicase conserved C-terminal domain ASA_3612 PF00753 Metallo-beta-lactamase superfamily ASA_3615 PF01425 Amidase ASA_3616 PF04371 Porphyromonas-type peptidyl-arginine deiminase ASA_3617 PF03466 LysR substrate binding domain ASA_3617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3618 PF00106 short chain dehydrogenase ASA_3621 PF00378 Enoyl-CoA hydratase/isomerase ASA_3622 PF10952 Protein of unknown function (DUF2753) ASA_3623 PF00132 Bacterial transferase hexapeptide (six repeats) ASA_3625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_3628 PF02594 Uncharacterised ACR, YggU family COG1872 ASA_3629 PF02325 YGGT family ASA_3630 PF14748 Pyrroline-5-carboxylate reductase dimerisation ASA_3630 PF03807 NADP oxidoreductase coenzyme F420-dependent ASA_3631 PF01168 Alanine racemase, N-terminal domain ASA_3632 PF00437 Type II/IV secretion system protein ASA_3633 PF00437 Type II/IV secretion system protein ASA_3634 PF03883 Peroxide stress protein YaaA ASA_3635 PF00271 Helicase conserved C-terminal domain ASA_3635 PF00270 DEAD/DEAH box helicase ASA_3636 PF05175 Methyltransferase small domain ASA_3637 PF05525 Branched-chain amino acid transport protein ASA_3640 PF01475 Ferric uptake regulator family ASA_3641 PF01207 Dihydrouridine synthase (Dus) ASA_3644 PF00216 Bacterial DNA-binding protein ASA_3645 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ASA_3646 PF07238 PilZ domain ASA_3647 PF18073 Rubredoxin metal binding domain ASA_3650 PF18429 Domain of unknown function (DUF5609) ASA_3652 PF01048 Phosphorylase superfamily ASA_3653 PF01676 Metalloenzyme superfamily ASA_3654 PF00591 Glycosyl transferase family, a/b domain ASA_3654 PF02885 Glycosyl transferase family, helical bundle domain ASA_3654 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ASA_3655 PF01791 DeoC/LacD family aldolase ASA_3657 PF07670 Nucleoside recognition ASA_3657 PF01773 Na+ dependent nucleoside transporter N-terminus ASA_3657 PF07662 Na+ dependent nucleoside transporter C-terminus ASA_3658 PF01026 TatD related DNase ASA_3661 PF00583 Acetyltransferase (GNAT) family ASA_3662 PF01938 TRAM domain ASA_3662 PF05958 tRNA (Uracil-5-)-methyltransferase ASA_3663 PF00909 Ammonium Transporter Family ASA_3666 PF02661 Fic/DOC family ASA_3666 PF13784 Fic/DOC family N-terminal ASA_3672 PF18818 Metallopeptidase superfamily domain ASA_3672 PF08401 Domain of unknown function (DUF1738) ASA_3672 PF13362 Toprim domain ASA_3674 PF10548 P22AR C-terminal domain ASA_3674 PF08346 AntA/AntB antirepressor ASA_3677 PF13592 Winged helix-turn helix ASA_3677 PF13358 DDE superfamily endonuclease ASA_3678 PF01491 Frataxin-like domain ASA_3679 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ASA_3679 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ASA_3680 PF01678 Diaminopimelate epimerase ASA_3682 PF02899 Phage integrase, N-terminal SAM-like domain ASA_3682 PF00589 Phage integrase family ASA_3683 PF13419 Haloacid dehalogenase-like hydrolase ASA_3685 PF00924 Mechanosensitive ion channel ASA_3687 PF07722 Peptidase C26 ASA_3691 PF00005 ABC transporter ASA_3693 PF00994 Probable molybdopterin binding domain ASA_3693 PF02464 Competence-damaged protein ASA_3694 PF01966 HD domain ASA_3694 PF00013 KH domain ASA_3694 PF12072 Domain of unknown function (DUF3552) ASA_3695 PF04204 Homoserine O-succinyltransferase ASA_3697 PF01037 Lrp/AsnC ligand binding domain ASA_3698 PF00884 Sulfatase ASA_3701 PF16657 Maltogenic Amylase, C-terminal domain ASA_3701 PF02903 Alpha amylase, N-terminal ig-like domain ASA_3701 PF00128 Alpha amylase, catalytic domain ASA_3702 PF02308 MgtC family ASA_3706 PF00106 short chain dehydrogenase ASA_3707 PF03577 Peptidase family C69 ASA_3710 PF00465 Iron-containing alcohol dehydrogenase ASA_3712 PF01053 Cys/Met metabolism PLP-dependent enzyme ASA_3714 PF12793 Sugar transport-related sRNA regulator N-term ASA_3714 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASA_3715 PF00141 Peroxidase ASA_3718 PF03280 Proteobacterial lipase chaperone protein ASA_3719 PF00561 alpha/beta hydrolase fold ASA_3721 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ASA_3721 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ASA_3722 PF02698 DUF218 domain ASA_3723 PF01752 Collagenase ASA_3723 PF08453 Peptidase family M9 N-terminal ASA_3725 PF00419 Fimbrial protein ASA_3727 PF13953 PapC C-terminal domain ASA_3727 PF00577 Outer membrane usher protein ASA_3727 PF13954 PapC N-terminal domain ASA_3728 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ASA_3728 PF02753 Pili assembly chaperone PapD, C-terminal domain ASA_3729 PF00419 Fimbrial protein ASA_3730 PF00419 Fimbrial protein ASA_3733 PF00501 AMP-binding enzyme ASA_3734 PF13378 Enolase C-terminal domain-like ASA_3735 PF00378 Enoyl-CoA hydratase/isomerase ASA_3736 PF12697 Alpha/beta hydrolase family ASA_3737 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASA_3737 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASA_3737 PF16582 Middle domain of thiamine pyrophosphate ASA_3738 PF00425 chorismate binding enzyme ASA_3739 PF01040 UbiA prenyltransferase family ASA_3744 PF00271 Helicase conserved C-terminal domain ASA_3744 PF00270 DEAD/DEAH box helicase ASA_3744 PF03880 DbpA RNA binding domain ASA_3745 PF07662 Na+ dependent nucleoside transporter C-terminus ASA_3745 PF07670 Nucleoside recognition ASA_3745 PF01773 Na+ dependent nucleoside transporter N-terminus ASA_3746 PF04307 LexA-binding, inner membrane-associated putative hydrolase ASA_3749 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ASA_3750 PF01544 CorA-like Mg2+ transporter protein ASA_3753 PF00226 DnaJ domain ASA_3753 PF00684 DnaJ central domain ASA_3753 PF01556 DnaJ C terminal domain ASA_3754 PF02080 TrkA-C domain ASA_3754 PF03471 Transporter associated domain ASA_3754 PF00999 Sodium/hydrogen exchanger family ASA_3755 PF05068 Mannitol repressor ASA_3756 PF01232 Mannitol dehydrogenase Rossmann domain ASA_3756 PF08125 Mannitol dehydrogenase C-terminal domain ASA_3757 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASA_3757 PF02378 Phosphotransferase system, EIIC ASA_3757 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASA_3760 PF00773 RNB domain ASA_3760 PF17876 Cold shock domain ASA_3760 PF08206 Ribonuclease B OB domain ASA_3761 PF03466 LysR substrate binding domain ASA_3761 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3762 PF00765 Autoinducer synthase ASA_3763 PF00196 Bacterial regulatory proteins, luxR family ASA_3763 PF03472 Autoinducer binding domain ASA_3764 PF01810 LysE type translocator ASA_3765 PF00149 Calcineurin-like phosphoesterase ASA_3765 PF02872 5'-nucleotidase, C-terminal domain ASA_3766 PF05433 Glycine zipper 2TM domain ASA_3767 PF00583 Acetyltransferase (GNAT) family ASA_3768 PF11756 Nitrous oxide-stimulated promoter ASA_3769 PF00557 Metallopeptidase family M24 ASA_3769 PF01321 Creatinase/Prolidase N-terminal domain ASA_3770 PF00392 Bacterial regulatory proteins, gntR family ASA_3771 PF01293 Phosphoenolpyruvate carboxykinase ASA_3772 PF01430 Hsp33 protein ASA_3773 PF01479 S4 domain ASA_3774 PF11356 Type II secretion system protein C ASA_3775 PF03958 Bacterial type II/III secretion system short domain ASA_3775 PF00263 Bacterial type II and III secretion system protein ASA_3776 PF00437 Type II/IV secretion system protein ASA_3777 PF00482 Type II secretion system (T2SS), protein F ASA_3778 PF07963 Prokaryotic N-terminal methylation motif ASA_3778 PF08334 Type II secretion system (T2SS), protein G ASA_3779 PF12019 Type II transport protein GspH ASA_3779 PF07963 Prokaryotic N-terminal methylation motif ASA_3780 PF07963 Prokaryotic N-terminal methylation motif ASA_3780 PF02501 Type II secretion system (T2SS), protein I ASA_3781 PF07963 Prokaryotic N-terminal methylation motif ASA_3781 PF11612 Type II secretion system (T2SS), protein J ASA_3782 PF03934 Type II secretion system (T2SS), protein K ASA_3783 PF12693 GspL periplasmic domain ASA_3783 PF05134 Type II secretion system (T2SS), protein L ASA_3784 PF04612 Type II secretion system (T2SS), protein M ASA_3785 PF01203 Type II secretion system (T2SS), protein N ASA_3786 PF00196 Bacterial regulatory proteins, luxR family ASA_3787 PF00579 tRNA synthetases class I (W and Y) ASA_3787 PF01479 S4 domain ASA_3788 PF13419 Haloacid dehalogenase-like hydrolase ASA_3789 PF00293 NUDIX domain ASA_3790 PF00459 Inositol monophosphatase family ASA_3791 PF03222 Tryptophan/tyrosine permease family ASA_3792 PF01588 Putative tRNA binding domain ASA_3793 PF12833 Helix-turn-helix domain ASA_3793 PF02311 AraC-like ligand binding domain ASA_3794 PF01340 Met Apo-repressor, MetJ ASA_3795 PF01053 Cys/Met metabolism PLP-dependent enzyme ASA_3796 PF00696 Amino acid kinase family ASA_3796 PF03447 Homoserine dehydrogenase, NAD binding domain ASA_3796 PF00742 Homoserine dehydrogenase ASA_3799 PF04172 LrgB-like family ASA_3800 PF03788 LrgA family ASA_3803 PF00392 Bacterial regulatory proteins, gntR family ASA_3803 PF00155 Aminotransferase class I and II ASA_3807 PF04073 Aminoacyl-tRNA editing domain ASA_3808 PF02464 Competence-damaged protein ASA_3809 PF00154 recA bacterial DNA recombination protein ASA_3810 PF02631 RecX family ASA_3811 PF02272 DHHA1 domain ASA_3811 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASA_3811 PF01411 tRNA synthetases class II (A) ASA_3812 PF01842 ACT domain ASA_3812 PF00696 Amino acid kinase family ASA_3812 PF13840 ACT domain ASA_3813 PF02599 Global regulator protein family ASA_3818 PF00768 D-alanyl-D-alanine carboxypeptidase ASA_3819 PF09335 SNARE associated Golgi protein ASA_3820 PF00571 CBS domain ASA_3820 PF03471 Transporter associated domain ASA_3820 PF01595 Cyclin M transmembrane N-terminal domain ASA_3821 PF00133 tRNA synthetases class I (I, L, M and V) ASA_3821 PF08264 Anticodon-binding domain of tRNA ASA_3821 PF10458 Valyl tRNA synthetase tRNA binding arm ASA_3822 PF04364 DNA polymerase III chi subunit, HolC ASA_3823 PF02789 Cytosol aminopeptidase family, N-terminal domain ASA_3823 PF00883 Cytosol aminopeptidase family, catalytic domain ASA_3824 PF03739 Lipopolysaccharide export system permease LptF/LptG ASA_3825 PF03739 Lipopolysaccharide export system permease LptF/LptG ASA_3868 PF06892 Phage regulatory protein CII (CP76) ASA_3870 PF00717 Peptidase S24-like ASA_3870 PF01381 Helix-turn-helix ASA_3871 PF02899 Phage integrase, N-terminal SAM-like domain ASA_3871 PF00589 Phage integrase family ASA_3872 PF00589 Phage integrase family ASA_3872 PF13356 Arm DNA-binding domain ASA_3873 PF13358 DDE superfamily endonuclease ASA_3873 PF13592 Winged helix-turn helix ASA_3874 PF12633 Adenylate cyclase NT domain ASA_3874 PF01295 Adenylate cyclase, class-I ASA_3875 PF03900 Porphobilinogen deaminase, C-terminal domain ASA_3875 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ASA_3876 PF02602 Uroporphyrinogen-III synthase HemD ASA_3877 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ASA_3880 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ASA_3883 PF00593 TonB dependent receptor ASA_3883 PF07715 TonB-dependent Receptor Plug Domain ASA_3888 PF08803 Putative mono-oxygenase ydhR ASA_3890 PF06055 Exopolysaccharide synthesis, ExoD ASA_3894 PF13036 Peptidoglycan-synthase activator LpoB ASA_3895 PF00132 Bacterial transferase hexapeptide (six repeats) ASA_3900 PF04055 Radical SAM superfamily ASA_3900 PF06968 Biotin and Thiamin Synthesis associated domain ASA_3901 PF05690 Thiazole biosynthesis protein ThiG ASA_3903 PF00899 ThiF family ASA_3904 PF02581 Thiamine monophosphate synthase ASA_3905 PF13667 ThiC-associated domain ASA_3905 PF01964 Radical SAM ThiC family ASA_3906 PF03440 Aerolysin/Pertussis toxin (APT) domain ASA_3906 PF01117 Aerolysin toxin ASA_3909 PF00486 Transcriptional regulatory protein, C terminal ASA_3909 PF00072 Response regulator receiver domain ASA_3911 PF08443 RimK-like ATP-grasp domain ASA_3911 PF18030 RimK PreATP-grasp domain ASA_3912 PF02607 B12 binding domain ASA_3912 PF00809 Pterin binding enzyme ASA_3912 PF02965 Vitamin B12 dependent methionine synthase, activation domain ASA_3912 PF02310 B12 binding domain ASA_3912 PF02574 Homocysteine S-methyltransferase ASA_3913 PF00999 Sodium/hydrogen exchanger family ASA_3917 PF08668 HDOD domain ASA_3919 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ASA_3920 PF13426 PAS domain ASA_3920 PF08447 PAS fold ASA_3920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_3921 PF01740 STAS domain ASA_3921 PF08678 Rsbr N terminal ASA_3922 PF13581 Histidine kinase-like ATPase domain ASA_3923 PF01627 Hpt domain ASA_3923 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ASA_3923 PF00072 Response regulator receiver domain ASA_3923 PF00672 HAMP domain ASA_3923 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_3923 PF00512 His Kinase A (phospho-acceptor) domain ASA_3924 PF00072 Response regulator receiver domain ASA_3927 PF01914 MarC family integral membrane protein ASA_3929 PF01523 Putative modulator of DNA gyrase ASA_3930 PF00795 Carbon-nitrogen hydrolase ASA_3932 PF13116 Protein of unknown function ASA_3932 PF13502 AsmA-like C-terminal region ASA_3933 PF00575 S1 RNA binding domain ASA_3933 PF10150 Ribonuclease E/G family ASA_3934 PF02545 Maf-like protein ASA_3935 PF04093 rod shape-determining protein MreD ASA_3936 PF04085 rod shape-determining protein MreC ASA_3943 PF03958 Bacterial type II/III secretion system short domain ASA_3943 PF00263 Bacterial type II and III secretion system protein ASA_3949 PF00563 EAL domain ASA_3949 PF00990 Diguanylate cyclase, GGDEF domain ASA_3949 PF17157 Gammaproteobacterial periplasmic sensor domain ASA_3951 PF01699 Sodium/calcium exchanger protein ASA_3952 PF00221 Aromatic amino acid lyase ASA_3953 PF17391 Urocanase N-terminal domain ASA_3953 PF01175 Urocanase Rossmann-like domain ASA_3953 PF17392 Urocanase C-terminal domain ASA_3954 PF00491 Arginase family ASA_3955 PF01979 Amidohydrolase family ASA_3956 PF07702 UTRA domain ASA_3956 PF00392 Bacterial regulatory proteins, gntR family ASA_3957 PF00484 Carbonic anhydrase ASA_3958 PF00140 Sigma-70 factor, region 1.2 ASA_3958 PF04542 Sigma-70 region 2 ASA_3958 PF04545 Sigma-70, region 4 ASA_3959 PF18075 FtsX extracellular domain ASA_3960 PF00005 ABC transporter ASA_3961 PF02881 SRP54-type protein, helical bundle domain ASA_3961 PF00448 SRP54-type protein, GTPase domain ASA_3965 PF00440 Bacterial regulatory proteins, tetR family ASA_3967 PF13091 PLD-like domain ASA_3968 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_3968 PF01464 Transglycosylase SLT domain ASA_3970 PF02416 mttA/Hcf106 family ASA_3971 PF03466 LysR substrate binding domain ASA_3971 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_3972 PF01914 MarC family integral membrane protein ASA_3973 PF10678 Protein of unknown function (DUF2492) ASA_3974 PF00375 Sodium:dicarboxylate symporter family ASA_3977 PF13533 Biotin-lipoyl like ASA_3978 PF07690 Major Facilitator Superfamily ASA_3979 PF07947 YhhN family ASA_3983 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ASA_3983 PF00326 Prolyl oligopeptidase family ASA_3986 PF02525 Flavodoxin-like fold ASA_3987 PF00999 Sodium/hydrogen exchanger family ASA_3987 PF02254 TrkA-N domain ASA_3991 PF03400 IS1 transposase ASA_3992 PF03811 InsA N-terminal domain ASA_3992 PF12759 InsA C-terminal domain ASA_3994 PF01545 Cation efflux family ASA_3994 PF16916 Dimerisation domain of Zinc Transporter ASA_3997 PF00436 Single-strand binding protein family ASA_3998 PF00196 Bacterial regulatory proteins, luxR family ASA_3999 PF00005 ABC transporter ASA_3999 PF17760 UvrA interaction domain ASA_3999 PF17755 UvrA DNA-binding domain ASA_4000 PF17151 Periplasmic sensor domain ASA_4000 PF00990 Diguanylate cyclase, GGDEF domain ASA_4001 PF00313 'Cold-shock' DNA-binding domain ASA_4003 PF00990 Diguanylate cyclase, GGDEF domain ASA_4004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_4004 PF00672 HAMP domain ASA_4004 PF00512 His Kinase A (phospho-acceptor) domain ASA_4005 PF00072 Response regulator receiver domain ASA_4005 PF00486 Transcriptional regulatory protein, C terminal ASA_4010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASA_4010 PF00672 HAMP domain ASA_4010 PF02743 Cache domain ASA_4012 PF00990 Diguanylate cyclase, GGDEF domain ASA_4012 PF00072 Response regulator receiver domain ASA_4013 PF00543 Nitrogen regulatory protein P-II ASA_4014 PF00909 Ammonium Transporter Family ASA_4018 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ASA_4020 PF13538 UvrD-like helicase C-terminal domain ASA_4021 PF13361 UvrD-like helicase C-terminal domain ASA_4021 PF00580 UvrD/REP helicase N-terminal domain ASA_4021 PF12705 PD-(D/E)XK nuclease superfamily ASA_4022 PF17946 RecC C-terminal domain ASA_4023 PF07681 DoxX ASA_4024 PF02678 Pirin ASA_4024 PF17954 Quercetinase C-terminal cupin domain ASA_4028 PF07702 UTRA domain ASA_4028 PF00392 Bacterial regulatory proteins, gntR family ASA_4031 PF00528 Binding-protein-dependent transport system inner membrane component ASA_4033 PF00005 ABC transporter ASA_4033 PF08402 TOBE domain ASA_4035 PF00990 Diguanylate cyclase, GGDEF domain ASA_4040 PF06628 Catalase-related immune-responsive ASA_4040 PF00199 Catalase ASA_4045 PF00293 NUDIX domain ASA_4046 PF01594 AI-2E family transporter ASA_4047 PF00158 Sigma-54 interaction domain ASA_4047 PF00989 PAS fold ASA_4047 PF02954 Bacterial regulatory protein, Fis family ASA_4048 PF00465 Iron-containing alcohol dehydrogenase ASA_4049 PF00381 PTS HPr component phosphorylation site ASA_4049 PF00391 PEP-utilising enzyme, mobile domain ASA_4049 PF05524 PEP-utilising enzyme, N-terminal ASA_4049 PF03610 PTS system fructose IIA component ASA_4050 PF02734 DAK2 domain ASA_4051 PF02733 Dak1 domain ASA_4053 PF00665 Integrase core domain ASA_4054 PF01695 IstB-like ATP binding protein ASA_4061 PF01196 Ribosomal protein L17 ASA_4062 PF01000 RNA polymerase Rpb3/RpoA insert domain ASA_4062 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ASA_4062 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ASA_4063 PF00163 Ribosomal protein S4/S9 N-terminal domain ASA_4063 PF01479 S4 domain ASA_4064 PF00411 Ribosomal protein S11 ASA_4065 PF00416 Ribosomal protein S13/S18 ASA_4066 PF00444 Ribosomal protein L36 ASA_4067 PF00344 SecY translocase ASA_4068 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ASA_4069 PF00327 Ribosomal protein L30p/L7e ASA_4070 PF00333 Ribosomal protein S5, N-terminal domain ASA_4070 PF03719 Ribosomal protein S5, C-terminal domain ASA_4071 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ASA_4072 PF00347 Ribosomal protein L6 ASA_4073 PF00410 Ribosomal protein S8 ASA_4074 PF00253 Ribosomal protein S14p/S29e ASA_4075 PF00281 Ribosomal protein L5 ASA_4075 PF00673 ribosomal L5P family C-terminus ASA_4076 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ASA_4077 PF00238 Ribosomal protein L14p/L23e ASA_4078 PF00366 Ribosomal protein S17 ASA_4079 PF00831 Ribosomal L29 protein ASA_4080 PF00252 Ribosomal protein L16p/L10e ASA_4081 PF00189 Ribosomal protein S3, C-terminal domain ASA_4081 PF07650 KH domain ASA_4082 PF00237 Ribosomal protein L22p/L17e ASA_4083 PF00203 Ribosomal protein S19 ASA_4084 PF00181 Ribosomal Proteins L2, RNA binding domain ASA_4084 PF03947 Ribosomal Proteins L2, C-terminal domain ASA_4085 PF00276 Ribosomal protein L23 ASA_4086 PF00573 Ribosomal protein L4/L1 family ASA_4087 PF00297 Ribosomal protein L3 ASA_4088 PF00338 Ribosomal protein S10p/S20e ASA_4090 PF00512 His Kinase A (phospho-acceptor) domain ASA_4090 PF00672 HAMP domain ASA_4090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_4091 PF00486 Transcriptional regulatory protein, C terminal ASA_4091 PF00072 Response regulator receiver domain ASA_4092 PF01272 Transcription elongation factor, GreA/GreB, C-term ASA_4092 PF03449 Transcription elongation factor, N-terminal ASA_4094 PF16921 Tex protein YqgF-like domain ASA_4094 PF09371 Tex-like protein N-terminal domain ASA_4094 PF00575 S1 RNA binding domain ASA_4094 PF17674 HHH domain ASA_4098 PF00561 alpha/beta hydrolase fold ASA_4099 PF00156 Phosphoribosyl transferase domain ASA_4100 PF01106 NifU-like domain ASA_4100 PF01521 Iron-sulphur cluster biosynthesis ASA_4101 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ASA_4101 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ASA_4102 PF02556 Preprotein translocase subunit SecB ASA_4103 PF00581 Rhodanese-like domain ASA_4104 PF01676 Metalloenzyme superfamily ASA_4104 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ASA_4105 PF01551 Peptidase family M23 ASA_4107 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ASA_4107 PF00356 Bacterial regulatory proteins, lacI family ASA_4108 PF01081 KDPG and KHG aldolase ASA_4109 PF00920 Dehydratase family ASA_4110 PF01202 Shikimate kinase ASA_4111 PF02447 GntP family permease ASA_4112 PF13091 PLD-like domain ASA_4113 PF00270 DEAD/DEAH box helicase ASA_4113 PF00271 Helicase conserved C-terminal domain ASA_4113 PF17191 RecG wedge domain ASA_4115 PF00583 Acetyltransferase (GNAT) family ASA_4115 PF09500 Putative thioesterase (yiiD_Cterm) ASA_4118 PF03631 Virulence factor BrkB ASA_4120 PF00120 Glutamine synthetase, catalytic domain ASA_4120 PF03951 Glutamine synthetase, beta-Grasp domain ASA_4122 PF00989 PAS fold ASA_4122 PF00512 His Kinase A (phospho-acceptor) domain ASA_4122 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_4123 PF02954 Bacterial regulatory protein, Fis family ASA_4123 PF00072 Response regulator receiver domain ASA_4123 PF00158 Sigma-54 interaction domain ASA_4124 PF00962 Adenosine/AMP deaminase ASA_4125 PF06969 HemN C-terminal domain ASA_4125 PF04055 Radical SAM superfamily ASA_4126 PF10675 Protein of unknown function (DUF2489) ASA_4127 PF04220 Der GTPase activator (YihI) ASA_4128 PF00034 Cytochrome c ASA_4129 PF01926 50S ribosome-binding GTPase ASA_4131 PF07369 Protein of unknown function (DUF1488) ASA_4132 PF01488 Shikimate / quinate 5-dehydrogenase ASA_4132 PF08501 Shikimate dehydrogenase substrate binding domain ASA_4132 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ASA_4133 PF01218 Coproporphyrinogen III oxidase ASA_4134 PF01300 Telomere recombination ASA_4135 PF00731 AIR carboxylase ASA_4136 PF01396 Topoisomerase DNA binding C4 zinc finger ASA_4137 PF04361 Protein of unknown function (DUF494) ASA_4138 PF02481 DNA recombination-mediator protein A ASA_4138 PF17782 DprA winged helix domain ASA_4139 PF01476 LysM domain ASA_4140 PF01327 Polypeptide deformylase ASA_4141 PF00551 Formyl transferase ASA_4141 PF02911 Formyl transferase, C-terminal domain ASA_4142 PF01029 NusB family ASA_4142 PF01189 16S rRNA methyltransferase RsmB/F ASA_4143 PF02080 TrkA-C domain ASA_4143 PF02254 TrkA-N domain ASA_4144 PF02386 Cation transport protein ASA_4145 PF02646 RmuC family ASA_4148 PF02082 Transcriptional regulator ASA_4149 PF00294 pfkB family carbohydrate kinase ASA_4150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ASA_4150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ASA_4151 PF00958 GMP synthase C terminal domain ASA_4151 PF02540 NAD synthase ASA_4151 PF00117 Glutamine amidotransferase class-I ASA_4152 PF00171 Aldehyde dehydrogenase family ASA_4153 PF00202 Aminotransferase class-III ASA_4154 PF01381 Helix-turn-helix ASA_4155 PF00171 Aldehyde dehydrogenase family ASA_4157 PF00892 EamA-like transporter family ASA_4158 PF12833 Helix-turn-helix domain ASA_4159 PF01810 LysE type translocator ASA_4160 PF00690 Cation transporter/ATPase, N-terminus ASA_4160 PF00689 Cation transporting ATPase, C-terminus ASA_4161 PF04143 Sulphur transport ASA_4162 PF01810 LysE type translocator ASA_4163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_4163 PF03466 LysR substrate binding domain ASA_4167 PF04972 BON domain ASA_4174 PF13361 UvrD-like helicase C-terminal domain ASA_4174 PF00580 UvrD/REP helicase N-terminal domain ASA_4179 PF03466 LysR substrate binding domain ASA_4179 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_4180 PF08240 Alcohol dehydrogenase GroES-like domain ASA_4180 PF00107 Zinc-binding dehydrogenase ASA_4181 PF00756 Putative esterase ASA_4183 PF03781 Sulfatase-modifying factor enzyme 1 ASA_4183 PF12867 DinB superfamily ASA_4184 PF13593 SBF-like CPA transporter family (DUF4137) ASA_4193 PF00132 Bacterial transferase hexapeptide (six repeats) ASA_4194 PF01612 3'-5' exonuclease ASA_4194 PF00476 DNA polymerase family A ASA_4194 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ASA_4194 PF01367 5'-3' exonuclease, C-terminal SAM fold ASA_4196 PF06005 Cell division protein ZapB ASA_4198 PF00132 Bacterial transferase hexapeptide (six repeats) ASA_4198 PF06426 Serine acetyltransferase, N-terminal ASA_4199 PF01545 Cation efflux family ASA_4199 PF16916 Dimerisation domain of Zinc Transporter ASA_4200 PF00072 Response regulator receiver domain ASA_4200 PF00486 Transcriptional regulatory protein, C terminal ASA_4201 PF16527 Two-component sensor protein CpxA, periplasmic domain ASA_4201 PF00672 HAMP domain ASA_4201 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_4201 PF00512 His Kinase A (phospho-acceptor) domain ASA_4202 PF00588 SpoU rRNA Methylase family ASA_4204 PF02630 SCO1/SenC ASA_4206 PF00717 Peptidase S24-like ASA_4206 PF01726 LexA DNA binding domain ASA_4207 PF01553 Acyltransferase ASA_4208 PF01040 UbiA prenyltransferase family ASA_4209 PF04345 Chorismate lyase ASA_4210 PF03748 Flagellar basal body-associated protein FliL ASA_4215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ASA_4215 PF00356 Bacterial regulatory proteins, lacI family ASA_4216 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASA_4218 PF03611 PTS system sugar-specific permease component ASA_4219 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ASA_4220 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ASA_4221 PF00535 Glycosyl transferase family 2 ASA_4222 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ASA_4223 PF01467 Cytidylyltransferase-like ASA_4224 PF04393 Protein of unknown function (DUF535) ASA_4225 PF06827 Zinc finger found in FPG and IleRS ASA_4225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ASA_4225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ASA_4227 PF00471 Ribosomal protein L33 ASA_4228 PF00830 Ribosomal L28 family ASA_4229 PF04002 RadC-like JAB domain ASA_4230 PF02441 Flavoprotein ASA_4230 PF04127 DNA / pantothenate metabolism flavoprotein ASA_4231 PF00692 dUTPase ASA_4232 PF00440 Bacterial regulatory proteins, tetR family ASA_4233 PF05552 Conserved TM helix ASA_4233 PF00924 Mechanosensitive ion channel ASA_4235 PF00342 Phosphoglucose isomerase ASA_4236 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ASA_4236 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ASA_4237 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASA_4237 PF03466 LysR substrate binding domain ASA_4240 PF13607 Succinyl-CoA ligase like flavodoxin domain ASA_4240 PF13380 CoA binding domain ASA_4240 PF00583 Acetyltransferase (GNAT) family ASA_4245 PF12724 Flavodoxin domain ASA_4246 PF02386 Cation transport protein ASA_4247 PF09186 Domain of unknown function (DUF1949) ASA_4247 PF01205 Uncharacterized protein family UPF0029 ASA_4248 PF00557 Metallopeptidase family M24 ASA_4249 PF00501 AMP-binding enzyme ASA_4249 PF13193 AMP-binding enzyme C-terminal domain ASA_4250 PF00378 Enoyl-CoA hydratase/isomerase ASA_4250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ASA_4250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ASA_4251 PF02803 Thiolase, C-terminal domain ASA_4251 PF00108 Thiolase, N-terminal domain ASA_4252 PF00072 Response regulator receiver domain ASA_4252 PF00486 Transcriptional regulatory protein, C terminal ASA_4253 PF00672 HAMP domain ASA_4253 PF00512 His Kinase A (phospho-acceptor) domain ASA_4253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_4254 PF01547 Bacterial extracellular solute-binding protein ASA_4256 PF01206 Sulfurtransferase TusA ASA_4257 PF01042 Endoribonuclease L-PSP ASA_4258 PF00691 OmpA family ASA_4258 PF13488 Glycine zipper ASA_4259 PF03352 Methyladenine glycosylase ASA_4260 PF02091 Glycyl-tRNA synthetase alpha subunit ASA_4261 PF05746 DALR anticodon binding domain ASA_4261 PF02092 Glycyl-tRNA synthetase beta subunit ASA_4262 PF11008 Protein of unknown function (DUF2846) ASA_4263 PF01202 Shikimate kinase ASA_4265 PF00563 EAL domain ASA_4265 PF00990 Diguanylate cyclase, GGDEF domain ASA_4265 PF13426 PAS domain ASA_4266 PF03496 ADP-ribosyltransferase exoenzyme ASA_4266 PF03545 Yersinia virulence determinant (YopE) ASA_4267 PF05932 Tir chaperone protein (CesT) family ASA_4268 PF03222 Tryptophan/tyrosine permease family ASA_4269 PF12801 4Fe-4S binding domain ASA_4271 PF18113 Rubredoxin binding C-terminal domain ASA_4271 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_4272 PF00258 Flavodoxin ASA_4272 PF00301 Rubredoxin ASA_4272 PF00753 Metallo-beta-lactamase superfamily ASA_4273 PF01590 GAF domain ASA_4273 PF00158 Sigma-54 interaction domain ASA_4274 PF07702 UTRA domain ASA_4274 PF00392 Bacterial regulatory proteins, gntR family ASA_4276 PF02378 Phosphotransferase system, EIIC ASA_4276 PF00367 phosphotransferase system, EIIB ASA_4277 PF11975 Family 4 glycosyl hydrolase C-terminal domain ASA_4277 PF02056 Family 4 glycosyl hydrolase ASA_4278 PF00356 Bacterial regulatory proteins, lacI family ASA_4279 PF13458 Periplasmic binding protein ASA_4280 PF02653 Branched-chain amino acid transport system / permease component ASA_4281 PF02653 Branched-chain amino acid transport system / permease component ASA_4281 PF11862 Domain of unknown function (DUF3382) ASA_4282 PF00005 ABC transporter ASA_4282 PF12399 Branched-chain amino acid ATP-binding cassette transporter ASA_4283 PF00005 ABC transporter ASA_4285 PF01810 LysE type translocator ASA_4286 PF00581 Rhodanese-like domain ASA_4287 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ASA_4287 PF01694 Rhomboid family ASA_4288 PF12262 Bacterial virulence factor lipase N-terminal ASA_4289 PF04380 Membrane fusogenic activity ASA_4290 PF00175 Oxidoreductase NAD-binding domain ASA_4291 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ASA_4293 PF07498 Rho termination factor, N-terminal domain ASA_4293 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASA_4293 PF07497 Rho termination factor, RNA-binding domain ASA_4294 PF00085 Thioredoxin ASA_4295 PF00270 DEAD/DEAH box helicase ASA_4295 PF00271 Helicase conserved C-terminal domain ASA_4296 PF02541 Ppx/GppA phosphatase family ASA_4298 PF04445 Putative SAM-dependent methyltransferase ASA_4299 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_4300 PF03707 Bacterial signalling protein N terminal repeat ASA_4300 PF00990 Diguanylate cyclase, GGDEF domain ASA_4300 PF00563 EAL domain ASA_4301 PF01432 Peptidase family M3 ASA_4302 PF00490 Delta-aminolevulinic acid dehydratase ASA_4303 PF01026 TatD related DNase ASA_4304 PF00902 Sec-independent protein translocase protein (TatC) ASA_4305 PF02416 mttA/Hcf106 family ASA_4306 PF02416 mttA/Hcf106 family ASA_4307 PF03109 ABC1 family ASA_4308 PF02036 SCP-2 sterol transfer family ASA_4309 PF01209 ubiE/COQ5 methyltransferase family ASA_4310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ASA_4319 PF03544 Gram-negative bacterial TonB protein C-terminal ASA_4320 PF02472 Biopolymer transport protein ExbD/TolR ASA_4321 PF01618 MotA/TolQ/ExbB proton channel family ASA_4322 PF01618 MotA/TolQ/ExbB proton channel family ASA_4324 PF00196 Bacterial regulatory proteins, luxR family ASA_4324 PF03472 Autoinducer binding domain ASA_4326 PF02384 N-6 DNA Methylase ASA_4327 PF13592 Winged helix-turn helix ASA_4327 PF13358 DDE superfamily endonuclease ASA_4329 PF01695 IstB-like ATP binding protein ASA_4330 PF00665 Integrase core domain ASA_4337 PF13333 Integrase core domain ASA_4337 PF13276 HTH-like domain ASA_4337 PF00665 Integrase core domain ASA_4340 PF00665 Integrase core domain ASA_4341 PF08721 TnsA endonuclease C terminal ASA_4341 PF08722 TnsA endonuclease N terminal ASA_4342 PF01380 SIS domain ASA_4343 PF08220 DeoR-like helix-turn-helix domain ASA_4343 PF00455 DeoR C terminal sensor domain ASA_4344 PF00072 Response regulator receiver domain ASA_4344 PF00486 Transcriptional regulatory protein, C terminal ASA_4345 PF00512 His Kinase A (phospho-acceptor) domain ASA_4345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASA_4345 PF00672 HAMP domain ASA_4346 PF00905 Penicillin binding protein transpeptidase domain ASA_4347 PF06123 Inner membrane protein CreD ASA_4348 PF14602 Hexapeptide repeat of succinyl-transferase ASA_4348 PF00132 Bacterial transferase hexapeptide (six repeats) ASA_4348 PF12804 MobA-like NTP transferase domain ASA_4349 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ASA_4349 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ASA_4350 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASA_4350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASA_4351 PF00231 ATP synthase ASA_4352 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASA_4352 PF00306 ATP synthase alpha/beta chain, C terminal domain ASA_4352 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASA_4353 PF00213 ATP synthase delta (OSCP) subunit ASA_4354 PF00430 ATP synthase B/B' CF(0) ASA_4355 PF00137 ATP synthase subunit C ASA_4356 PF00119 ATP synthase A chain ASA_4357 PF03899 ATP synthase I chain ASA_4358 PF02195 ParB-like nuclease domain ASA_4358 PF17762 HTH domain found in ParB protein ASA_4359 PF13614 AAA domain ASA_4360 PF02527 rRNA small subunit methyltransferase G ASA_4361 PF01134 Glucose inhibited division protein A ASA_4361 PF13932 GidA associated domain ASA_4362 PF00258 Flavodoxin ASA_4363 PF00593 TonB dependent receptor ASA_4363 PF07715 TonB-dependent Receptor Plug Domain ASA_4364 PF00005 ABC transporter ASA_4365 PF00005 ABC transporter ASA_4366 PF01497 Periplasmic binding protein ASA_4367 PF01032 FecCD transport family ASA_4368 PF07715 TonB-dependent Receptor Plug Domain ASA_4368 PF00593 TonB dependent receptor ASA_4369 PF01497 Periplasmic binding protein ASA_4370 PF00005 ABC transporter ASA_4371 PF01032 FecCD transport family ASA_4372 PF01032 FecCD transport family ASA_4373 PF00005 ABC transporter ASA_4374 PF00664 ABC transporter transmembrane region ASA_4374 PF00005 ABC transporter ASA_4374 PF08021 Siderophore-interacting FAD-binding domain ASA_4374 PF04954 Siderophore-interacting protein ASA_4376 PF00550 Phosphopantetheine attachment site ASA_4376 PF00668 Condensation domain ASA_4376 PF13193 AMP-binding enzyme C-terminal domain ASA_4376 PF00975 Thioesterase domain ASA_4376 PF00501 AMP-binding enzyme ASA_4377 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ASA_4378 PF00550 Phosphopantetheine attachment site ASA_4378 PF00668 Condensation domain ASA_4378 PF00501 AMP-binding enzyme ASA_4380 PF00282 Pyridoxal-dependent decarboxylase conserved domain ASA_4381 PF10396 GTP-binding protein TrmE N-terminus ASA_4381 PF12631 MnmE helical domain ASA_4381 PF01926 50S ribosome-binding GTPase ASA_4382 PF02096 60Kd inner membrane protein ASA_4382 PF14849 YidC periplasmic domain ASA_4383 PF01809 Putative membrane protein insertion efficiency factor ASA_4384 PF00825 Ribonuclease P ASA_4385 PF00468 Ribosomal protein L34 ASA_4387 PF00528 Binding-protein-dependent transport system inner membrane component ASA_4388 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASA_P4G001 PF00665 Integrase core domain ASA_P4G002 PF01695 IstB-like ATP binding protein ASA_P4G004 PF00440 Bacterial regulatory proteins, tetR family ASA_P4G004 PF02909 Tetracyclin repressor-like, C-terminal domain ASA_P4G005 PF07690 Major Facilitator Superfamily ASA_P4G013 PF00665 Integrase core domain ASA_P4G024 PF08535 KorB domain ASA_P4G024 PF02195 ParB-like nuclease domain ASA_P4G024 PF06613 KorB C-terminal beta-barrel domain ASA_P4G025 PF13614 AAA domain ASA_P4G030 PF00216 Bacterial DNA-binding protein ASA_P4G031 PF00565 Staphylococcal nuclease homologue ASA_P4G040 PF04381 Putative exonuclease, RdgC ASA_P4G062 PF06122 Conjugative relaxosome accessory transposon protein ASA_P4G072 PF02463 RecF/RecN/SMC N terminal domain ASA_P4G080 PF04717 Type VI secretion system, phage-baseplate injector ASA_P4G085 PF00665 Integrase core domain ASA_P4G087 PF09278 MerR, DNA binding ASA_P4G087 PF00376 MerR family regulatory protein ASA_P4G088 PF02411 MerT mercuric transport protein ASA_P4G089 PF00403 Heavy-metal-associated domain ASA_P4G090 PF03203 MerC mercury resistance protein ASA_P4G091 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASA_P4G091 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASA_P4G091 PF00403 Heavy-metal-associated domain ASA_P4G092 PF13411 MerR HTH family regulatory protein ASA_P4G093 PF05052 MerE protein ASA_P4G094 PF00563 EAL domain ASA_P4G094 PF00990 Diguanylate cyclase, GGDEF domain ASA_P4G094 PF13188 PAS domain ASA_P4G094 PF03707 Bacterial signalling protein N terminal repeat ASA_P4G098 PF00809 Pterin binding enzyme ASA_P4G099 PF00893 Small Multidrug Resistance protein ASA_P4G100 PF01909 Nucleotidyltransferase domain ASA_P4G100 PF13427 Domain of unknown function (DUF4111) ASA_P4G101 PF00302 Chloramphenicol acetyltransferase ASA_P4G103 PF00589 Phage integrase family ASA_P4G103 PF13495 Phage integrase, N-terminal SAM-like domain ASA_P4G104 PF00563 EAL domain ASA_P4G104 PF11809 Domain of unknown function (DUF3330) ASA_P4G105 PF00239 Resolvase, N terminal domain ASA_P4G105 PF02796 Helix-turn-helix domain of resolvase ASA_P4G106 PF13700 Domain of unknown function (DUF4158) ASA_P4G106 PF01526 Tn3 transposase DDE domain ASA_P4G110 PF07804 HipA-like C-terminal domain ASA_P4G110 PF13657 HipA N-terminal domain ASA_P4G111 PF01381 Helix-turn-helix ASA_P4G112 PF00589 Phage integrase family ASA_P4G112 PF02899 Phage integrase, N-terminal SAM-like domain ASA_P4G141 PF00111 2Fe-2S iron-sulfur cluster binding domain ASA_P4G151 PF01609 Transposase DDE domain ASA_P4G151 PF13808 DDE_Tnp_1-associated ASA_P4G164 PF13808 DDE_Tnp_1-associated ASA_P4G164 PF01609 Transposase DDE domain ASA_P4G171 PF01131 DNA topoisomerase ASA_P4G171 PF01751 Toprim domain ASA_P4G176 PF10544 T5orf172 domain ASA_P5G002 PF00816 H-NS histone family ASA_P5G004 PF13614 AAA domain ASA_P5G006 PF00872 Transposase, Mutator family ASA_P5G009 PF00102 Protein-tyrosine phosphatase ASA_P5G009 PF09013 YopH, N-terminal ASA_P5G010 PF13358 DDE superfamily endonuclease ASA_P5G010 PF13592 Winged helix-turn helix ASA_P5G011 PF01906 Putative heavy-metal-binding ASA_P5G018 PF00816 H-NS histone family ASA_P5G021 PF13614 AAA domain ASA_P5G024 PF05513 TraA ASA_P5G025 PF07178 TraL protein ASA_P5G026 PF05309 TraE protein ASA_P5G028 PF03743 Bacterial conjugation TrbI-like protein ASA_P5G029 PF09676 Type IV conjugative transfer system lipoprotein (TraV) ASA_P5G030 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer ASA_P5G032 PF12477 Sex factor F TraW protein N terminal ASA_P5G033 PF06834 TraU protein ASA_P5G034 PF09673 Type-F conjugative transfer system pilin assembly protein ASA_P5G037 PF13728 F plasmid transfer operon protein ASA_P5G038 PF06122 Conjugative relaxosome accessory transposon protein ASA_P5G041 PF05818 Enterobacterial TraT complement resistance protein ASA_P5G042 PF10412 Type IV secretion-system coupling protein DNA-binding domain ASA_P5G042 PF12615 F sex factor protein N terminal ASA_P5G043 PF07057 DNA helicase TraI ASA_P5G043 PF18340 DNA relaxase TraI 2B/2B-like domain ASA_P5G043 PF08751 TrwC relaxase ASA_P5G043 PF18272 single-stranded DNA binding TraI N-terminal subdomain ASA_P5G044 PF00872 Transposase, Mutator family ASA_P5G047 PF02371 Transposase IS116/IS110/IS902 family ASA_P5G047 PF01548 Transposase ASA_P5G048 PF02108 Flagellar assembly protein FliH ASA_P5G049 PF06578 YOP proteins translocation protein K (YscK) ASA_P5G050 PF01514 Secretory protein of YscJ/FliF family ASA_P5G051 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI ASA_P5G052 PF09025 YopR, type III needle-polymerisation regulator ASA_P5G053 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) ASA_P5G054 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF ASA_P5G056 PF16693 Inner membrane component of T3SS, periplasmic domain ASA_P5G056 PF16697 Inner membrane component of T3SS, cytoplasmic domain ASA_P5G058 PF05932 Tir chaperone protein (CesT) family ASA_P5G060 PF12833 Helix-turn-helix domain ASA_P5G063 PF05932 Tir chaperone protein (CesT) family ASA_P5G064 PF05844 YopD protein ASA_P5G065 PF04888 Secretion system effector C (SseC) like family ASA_P5G066 PF07720 Tetratricopeptide repeat ASA_P5G067 PF04792 V antigen (LcrV) protein ASA_P5G068 PF07216 LcrG protein ASA_P5G069 PF09621 Type III secretion system regulator (LcrR) ASA_P5G070 PF00771 FHIPEP family ASA_P5G072 PF09474 Type III secretion system YscX (type_III_YscX) ASA_P5G074 PF09059 TyeA ASA_P5G075 PF07201 HrpJ-like domain ASA_P5G076 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASA_P5G076 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASA_P5G076 PF18269 T3SS EscN ATPase C-terminal domain ASA_P5G079 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ASA_P5G080 PF00813 FliP family ASA_P5G081 PF01313 Bacterial export proteins, family 3 ASA_P5G082 PF01311 Bacterial export proteins, family 1 ASA_P5G083 PF01312 FlhB HrpN YscU SpaS Family ASA_P5G088 PF00561 alpha/beta hydrolase fold ASA_P5G090 PF00872 Transposase, Mutator family ASA_P5G091 PF01695 IstB-like ATP binding protein ASA_P5G092 PF00665 Integrase core domain ASA_P5G093 PF13358 DDE superfamily endonuclease ASA_P5G093 PF13592 Winged helix-turn helix ASA_P5G096 PF01848 Hok/gef family ASA_P5G098 PF00069 Protein kinase domain ASA_P5G098 PF09632 Rac1-binding domain ASA_P5G116 PF13276 HTH-like domain ASA_P5G116 PF13333 Integrase core domain ASA_P5G116 PF00665 Integrase core domain ASA_P5G118 PF00589 Phage integrase family ASA_P5G120 PF13614 AAA domain ASA_P5G122 PF02371 Transposase IS116/IS110/IS902 family ASA_P5G122 PF01548 Transposase ASA_P5G123 PF03695 Uncharacterised protein family (UPF0149) ASA_P5G123 PF02810 SEC-C motif ASA_P5G124 PF01526 Tn3 transposase DDE domain ASA_P5G124 PF13700 Domain of unknown function (DUF4158) ASA_P5G127 PF02796 Helix-turn-helix domain of resolvase ASA_P5G127 PF00239 Resolvase, N terminal domain ASA_P5G128 PF18340 DNA relaxase TraI 2B/2B-like domain ASA_P5G128 PF18272 single-stranded DNA binding TraI N-terminal subdomain ASA_P5G128 PF08751 TrwC relaxase ASA_P5G128 PF07057 DNA helicase TraI ASA_P5G130 PF01464 Transglycosylase SLT domain ASA_P5G133 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ASA_P5G137 PF01555 DNA methylase ASA_P5G141 PF04002 RadC-like JAB domain ASA_P5G143 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ASA_P5G148 PF00665 Integrase core domain ASA_P5G149 PF01695 IstB-like ATP binding protein ASA_P5G151 PF01848 Hok/gef family ASA_P5G154 PF13333 Integrase core domain ASA_P5G154 PF00665 Integrase core domain ASA_P5G154 PF13276 HTH-like domain ASA_P5G157 PF08019 Phosphoethanolamine transferase EptA/EptB ASA_P5G157 PF00884 Sulfatase ASA_P5G158 PF00884 Sulfatase ASA_P5G158 PF08019 Phosphoethanolamine transferase EptA/EptB ASA_P5G160 PF00239 Resolvase, N terminal domain ASA_P5G160 PF02796 Helix-turn-helix domain of resolvase