locus-tag class description PI860_00160 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system PI860_00180 PF01066 CDP-alcohol phosphatidyltransferase PI860_00185 PF01541 GIY-YIG catalytic domain PI860_00185 PF02151 UvrB/uvrC motif PI860_00185 PF08459 UvrC Helix-hairpin-helix N-terminal PI860_00190 PF00196 Bacterial regulatory proteins, luxR family PI860_00190 PF00072 Response regulator receiver domain PI860_00195 PF02348 Cytidylyltransferase PI860_00200 PF03966 Trm112p-like protein PI860_00205 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PI860_00210 PF00664 ABC transporter transmembrane region PI860_00210 PF00005 ABC transporter PI860_00215 PF00753 Metallo-beta-lactamase superfamily PI860_00215 PF03772 Competence protein PI860_00230 PF05872 Bacterial protein of unknown function (DUF853) PI860_00235 PF00155 Aminotransferase class I and II PI860_00245 PF13609 Gram-negative porin PI860_00250 PF06733 DEAD_2 PI860_00250 PF13307 Helicase C-terminal domain PI860_00260 PF00850 Histone deacetylase domain PI860_00265 PF01926 50S ribosome-binding GTPase PI860_00270 PF00245 Alkaline phosphatase PI860_00275 PF00245 Alkaline phosphatase PI860_00290 PF01272 Transcription elongation factor, GreA/GreB, C-term PI860_00290 PF14760 Rnk N-terminus PI860_00295 PF00072 Response regulator receiver domain PI860_00295 PF00196 Bacterial regulatory proteins, luxR family PI860_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_00300 PF07730 Histidine kinase PI860_00300 PF05231 MASE1 PI860_00305 PF07690 Major Facilitator Superfamily PI860_00310 PF00990 Diguanylate cyclase, GGDEF domain PI860_00310 PF08448 PAS fold PI860_00315 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_00320 PF00528 Binding-protein-dependent transport system inner membrane component PI860_00325 PF00005 ABC transporter PI860_00330 PF04116 Fatty acid hydroxylase superfamily PI860_00335 PF13520 Amino acid permease PI860_00350 PF00571 CBS domain PI860_00350 PF03471 Transporter associated domain PI860_00350 PF01595 Cyclin M transmembrane N-terminal domain PI860_00355 PF01895 PhoU domain PI860_00360 PF00005 ABC transporter PI860_00365 PF00528 Binding-protein-dependent transport system inner membrane component PI860_00370 PF00528 Binding-protein-dependent transport system inner membrane component PI860_00375 PF14437 MafB19-like deaminase PI860_00390 PF01274 Malate synthase PI860_00395 PF00463 Isocitrate lyase family PI860_00400 PF00308 Bacterial dnaA protein PI860_00415 PF02769 AIR synthase related protein, C-terminal domain PI860_00415 PF00586 AIR synthase related protein, N-terminal domain PI860_00420 PF00551 Formyl transferase PI860_00425 PF01784 NIF3 (NGG1p interacting factor 3) PI860_00430 PF02954 Bacterial regulatory protein, Fis family PI860_00430 PF00072 Response regulator receiver domain PI860_00430 PF00158 Sigma-54 interaction domain PI860_00435 PF13188 PAS domain PI860_00435 PF00512 His Kinase A (phospho-acceptor) domain PI860_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_00455 PF13089 Polyphosphate kinase N-terminal domain PI860_00455 PF17941 Polyphosphate kinase C-terminal domain 1 PI860_00455 PF13090 Polyphosphate kinase C-terminal domain 2 PI860_00455 PF02503 Polyphosphate kinase middle domain PI860_00460 PF02541 Ppx/GppA phosphatase family PI860_00465 PF00571 CBS domain PI860_00465 PF01769 Divalent cation transporter PI860_00465 PF03448 MgtE intracellular N domain PI860_00480 PF10135 Rod binding protein PI860_00480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PI860_00485 PF02119 Flagellar P-ring protein PI860_00490 PF02107 Flagellar L-ring protein PI860_00495 PF00460 Flagella basal body rod protein PI860_00495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_00500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_00500 PF00460 Flagella basal body rod protein PI860_00505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_00505 PF00460 Flagella basal body rod protein PI860_00505 PF07559 Flagellar basal body protein FlaE PI860_00515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_00515 PF00460 Flagella basal body rod protein PI860_00520 PF00460 Flagella basal body rod protein PI860_00530 PF01739 CheR methyltransferase, SAM binding domain PI860_00530 PF03705 CheR methyltransferase, all-alpha domain PI860_00535 PF00072 Response regulator receiver domain PI860_00535 PF01584 CheW-like domain PI860_00555 PF12850 Calcineurin-like phosphoesterase superfamily domain PI860_00560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_00570 PF01479 S4 domain PI860_00570 PF00849 RNA pseudouridylate synthase PI860_00575 PF01966 HD domain PI860_00575 PF11871 Domain of unknown function (DUF3391) PI860_00615 PF00313 'Cold-shock' DNA-binding domain PI860_00620 PF02817 e3 binding domain PI860_00620 PF00364 Biotin-requiring enzyme PI860_00620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PI860_00625 PF13358 DDE superfamily endonuclease PI860_00625 PF13592 Winged helix-turn helix PI860_00630 PF02780 Transketolase, C-terminal domain PI860_00630 PF02779 Transketolase, pyrimidine binding domain PI860_00635 PF00676 Dehydrogenase E1 component PI860_00640 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PI860_00655 PF01695 IstB-like ATP binding protein PI860_00660 PF00665 Integrase core domain PI860_00670 PF00176 SNF2 family N-terminal domain PI860_00670 PF04434 SWIM zinc finger PI860_00670 PF00271 Helicase conserved C-terminal domain PI860_00675 PF04337 Protein of unknown function, DUF480 PI860_00685 PF02397 Bacterial sugar transferase PI860_00700 PF13439 Glycosyltransferase Family 4 PI860_00700 PF00534 Glycosyl transferases group 1 PI860_00715 PF00535 Glycosyl transferase family 2 PI860_00730 PF02719 Polysaccharide biosynthesis protein PI860_00735 PF00953 Glycosyl transferase family 4 PI860_00740 PF01370 NAD dependent epimerase/dehydratase family PI860_00750 PF02080 TrkA-C domain PI860_00750 PF03600 Citrate transporter PI860_00755 PF03600 Citrate transporter PI860_00755 PF02080 TrkA-C domain PI860_00775 PF02350 UDP-N-acetylglucosamine 2-epimerase PI860_00790 PF00005 ABC transporter PI860_00800 PF03958 Bacterial type II/III secretion system short domain PI860_00800 PF00263 Bacterial type II and III secretion system protein PI860_00840 PF07963 Prokaryotic N-terminal methylation motif PI860_00840 PF08334 Type II secretion system (T2SS), protein G PI860_00845 PF00482 Type II secretion system (T2SS), protein F PI860_00850 PF00437 Type II/IV secretion system protein PI860_00850 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PI860_00860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PI860_00865 PF00483 Nucleotidyl transferase PI860_00870 PF04321 RmlD substrate binding domain PI860_00875 PF16363 GDP-mannose 4,6 dehydratase PI860_00880 PF13358 DDE superfamily endonuclease PI860_00880 PF13592 Winged helix-turn helix PI860_00885 PF02321 Outer membrane efflux protein PI860_00890 PF00873 AcrB/AcrD/AcrF family PI860_00895 PF00529 HlyD membrane-fusion protein of T1SS PI860_00895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_00900 PF08361 MAATS-type transcriptional repressor, C-terminal region PI860_00900 PF00440 Bacterial regulatory proteins, tetR family PI860_00925 PF00849 RNA pseudouridylate synthase PI860_00925 PF01479 S4 domain PI860_00930 PF04079 Segregation and condensation complex subunit ScpB PI860_00935 PF02616 Segregation and condensation protein ScpA PI860_00940 PF01300 Telomere recombination PI860_00945 PF02811 PHP domain PI860_00950 PF04715 Anthranilate synthase component I, N terminal region PI860_00950 PF00425 chorismate binding enzyme PI860_00955 PF00117 Glutamine amidotransferase class-I PI860_00955 PF02885 Glycosyl transferase family, helical bundle domain PI860_00955 PF00591 Glycosyl transferase family, a/b domain PI860_00960 PF02885 Glycosyl transferase family, helical bundle domain PI860_00960 PF00591 Glycosyl transferase family, a/b domain PI860_00965 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PI860_00965 PF00218 Indole-3-glycerol phosphate synthase PI860_00970 PF00291 Pyridoxal-phosphate dependent enzyme PI860_00975 PF00290 Tryptophan synthase alpha chain PI860_00985 PF13592 Winged helix-turn helix PI860_00985 PF13358 DDE superfamily endonuclease PI860_01000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI860_01000 PF02378 Phosphotransferase system, EIIC PI860_01000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI860_01005 PF07690 Major Facilitator Superfamily PI860_01010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI860_01020 PF00849 RNA pseudouridylate synthase PI860_01025 PF00293 NUDIX domain PI860_01035 PF04356 Protein of unknown function (DUF489) PI860_01040 PF08328 Adenylosuccinate lyase C-terminal PI860_01040 PF00206 Lyase PI860_01045 PF08007 Cupin superfamily protein PI860_01055 PF13358 DDE superfamily endonuclease PI860_01055 PF13592 Winged helix-turn helix PI860_01065 PF13508 Acetyltransferase (GNAT) domain PI860_01085 PF01243 Pyridoxamine 5'-phosphate oxidase PI860_01085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PI860_01100 PF01189 16S rRNA methyltransferase RsmB/F PI860_01100 PF01029 NusB family PI860_01105 PF00462 Glutaredoxin PI860_01110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PI860_01110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PI860_01115 PF04333 MlaA lipoprotein PI860_01125 PF03918 Cytochrome C biogenesis protein PI860_01130 PF08534 Redoxin PI860_01135 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PI860_01135 PF01578 Cytochrome C assembly protein PI860_01140 PF03100 CcmE PI860_01145 PF04995 Heme exporter protein D (CcmD) PI860_01150 PF01578 Cytochrome C assembly protein PI860_01155 PF03379 CcmB protein PI860_01160 PF00005 ABC transporter PI860_01175 PF01584 CheW-like domain PI860_01185 PF13614 AAA domain PI860_01190 PF13677 Membrane MotB of proton-channel complex MotA/MotB PI860_01190 PF00691 OmpA family PI860_01195 PF01618 MotA/TolQ/ExbB proton channel family PI860_01200 PF00072 Response regulator receiver domain PI860_01200 PF01339 CheB methylesterase PI860_01205 PF00072 Response regulator receiver domain PI860_01205 PF01584 CheW-like domain PI860_01205 PF02895 Signal transducing histidine kinase, homodimeric domain PI860_01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_01205 PF01627 Hpt domain PI860_01210 PF04344 Chemotaxis phosphatase, CheZ PI860_01215 PF00072 Response regulator receiver domain PI860_01220 PF04545 Sigma-70, region 4 PI860_01220 PF04542 Sigma-70 region 2 PI860_01220 PF04539 Sigma-70 region 3 PI860_01225 PF10609 NUBPL iron-transfer P-loop NTPase PI860_01230 PF00448 SRP54-type protein, GTPase domain PI860_01235 PF00771 FHIPEP family PI860_01240 PF01312 FlhB HrpN YscU SpaS Family PI860_01245 PF01311 Bacterial export proteins, family 1 PI860_01250 PF01313 Bacterial export proteins, family 3 PI860_01255 PF00813 FliP family PI860_01260 PF04347 Flagellar biosynthesis protein, FliO PI860_01265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI860_01270 PF02154 Flagellar motor switch protein FliM PI860_01270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI860_01290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI860_01290 PF18269 T3SS EscN ATPase C-terminal domain PI860_01300 PF01706 FliG C-terminal domain PI860_01300 PF14841 FliG middle domain PI860_01300 PF14842 FliG N-terminal domain PI860_01305 PF08345 Flagellar M-ring protein C-terminal PI860_01305 PF01514 Secretory protein of YscJ/FliF family PI860_01310 PF02049 Flagellar hook-basal body complex protein FliE PI860_01320 PF07969 Amidohydrolase family PI860_01335 PF02001 Protein of unknown function DUF134 PI860_01350 PF00072 Response regulator receiver domain PI860_01355 PF04055 Radical SAM superfamily PI860_01355 PF18693 TRAM domain PI860_01355 PF00919 Uncharacterized protein family UPF0004 PI860_01365 PF00072 Response regulator receiver domain PI860_01365 PF00486 Transcriptional regulatory protein, C terminal PI860_01370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_01375 PF02685 Glucokinase PI860_01380 PF01418 Helix-turn-helix domain, rpiR family PI860_01380 PF01380 SIS domain PI860_01385 PF00224 Pyruvate kinase, barrel domain PI860_01385 PF02887 Pyruvate kinase, alpha/beta domain PI860_01395 PF00873 AcrB/AcrD/AcrF family PI860_01400 PF09317 Domain of unknown function (DUF1974) PI860_01400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PI860_01400 PF02770 Acyl-CoA dehydrogenase, middle domain PI860_01400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PI860_01405 PF00440 Bacterial regulatory proteins, tetR family PI860_01445 PF03527 RHS protein PI860_01445 PF05593 RHS Repeat PI860_01455 PF01695 IstB-like ATP binding protein PI860_01460 PF00665 Integrase core domain PI860_01475 PF13358 DDE superfamily endonuclease PI860_01475 PF13592 Winged helix-turn helix PI860_01480 PF08878 Domain of unknown function (DUF1837) PI860_01480 PF14130 Domain of unknown function (DUF4297) PI860_01490 PF17969 L,D-transpeptidase C-terminal domain PI860_01490 PF01476 LysM domain PI860_01490 PF03734 L,D-transpeptidase catalytic domain PI860_01500 PF01575 MaoC like domain PI860_01505 PF05971 RNA methyltransferase PI860_01510 PF00877 NlpC/P60 family PI860_01515 PF01648 4'-phosphopantetheinyl transferase superfamily PI860_01530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PI860_01535 PF01842 ACT domain PI860_01535 PF00551 Formyl transferase PI860_01545 PF13091 PLD-like domain PI860_01545 PF13396 Phospholipase_D-nuclease N-terminal PI860_01560 PF01551 Peptidase family M23 PI860_01565 PF00128 Alpha amylase, catalytic domain PI860_01570 PF01464 Transglycosylase SLT domain PI860_01570 PF01551 Peptidase family M23 PI860_01570 PF10145 Phage-related minor tail protein PI860_01575 PF00230 Major intrinsic protein PI860_01580 PF02075 Crossover junction endodeoxyribonuclease RuvC PI860_01585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PI860_01615 PF08497 Radical SAM N-terminal PI860_01615 PF11842 Domain of unknown function (DUF3362) PI860_01615 PF04055 Radical SAM superfamily PI860_01625 PF00873 AcrB/AcrD/AcrF family PI860_01630 PF13533 Biotin-lipoyl like PI860_01635 PF00990 Diguanylate cyclase, GGDEF domain PI860_01635 PF05230 MASE2 domain PI860_01640 PF01734 Patatin-like phospholipase PI860_01645 PF00209 Sodium:neurotransmitter symporter family PI860_01660 PF00691 OmpA family PI860_01660 PF01389 OmpA-like transmembrane domain PI860_01665 PF00691 OmpA family PI860_01665 PF01389 OmpA-like transmembrane domain PI860_01670 PF00691 OmpA family PI860_01670 PF01389 OmpA-like transmembrane domain PI860_01675 PF00390 Malic enzyme, N-terminal domain PI860_01675 PF03949 Malic enzyme, NAD binding domain PI860_01680 PF12833 Helix-turn-helix domain PI860_01685 PF01554 MatE PI860_01690 PF10692 Protein of unknown function (DUF2498) PI860_01695 PF00072 Response regulator receiver domain PI860_01695 PF00990 Diguanylate cyclase, GGDEF domain PI860_01700 PF00860 Permease family PI860_01710 PF01235 Sodium:alanine symporter family PI860_01715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PI860_01715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PI860_01720 PF01699 Sodium/calcium exchanger protein PI860_01725 PF00462 Glutaredoxin PI860_01725 PF08534 Redoxin PI860_01735 PF00293 NUDIX domain PI860_01755 PF00005 ABC transporter PI860_01760 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PI860_01760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI860_01765 PF03932 CutC family PI860_01770 PF00480 ROK family PI860_01780 PF01435 Peptidase family M48 PI860_01785 PF12849 PBP superfamily domain PI860_01790 PF11808 Phosphate regulon sensor protein PhoR PI860_01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_01790 PF00512 His Kinase A (phospho-acceptor) domain PI860_01790 PF00989 PAS fold PI860_01795 PF00072 Response regulator receiver domain PI860_01795 PF00486 Transcriptional regulatory protein, C terminal PI860_01800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI860_01805 PF07694 5TMR of 5TMR-LYT PI860_01805 PF00990 Diguanylate cyclase, GGDEF domain PI860_01830 PF12431 Transcriptional regulator PI860_01830 PF00072 Response regulator receiver domain PI860_01835 PF00989 PAS fold PI860_01835 PF17203 Single cache domain 3 PI860_01835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PI860_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_01840 PF00390 Malic enzyme, N-terminal domain PI860_01840 PF03949 Malic enzyme, NAD binding domain PI860_01855 PF01047 MarR family PI860_01860 PF00529 HlyD membrane-fusion protein of T1SS PI860_01860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_01895 PF03477 ATP cone domain PI860_01895 PF13597 Anaerobic ribonucleoside-triphosphate reductase PI860_01905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PI860_01905 PF00533 BRCA1 C Terminus (BRCT) domain PI860_01905 PF01653 NAD-dependent DNA ligase adenylation domain PI860_01905 PF03120 NAD-dependent DNA ligase OB-fold domain PI860_01905 PF12826 Helix-hairpin-helix motif PI860_01910 PF04354 ZipA, C-terminal FtsZ-binding domain PI860_01915 PF02463 RecF/RecN/SMC N terminal domain PI860_01915 PF06470 SMC proteins Flexible Hinge Domain PI860_01925 PF03458 UPF0126 domain PI860_01935 PF05951 Bacterial protein of unknown function (DUF882) PI860_01940 PF03734 L,D-transpeptidase catalytic domain PI860_01940 PF01471 Putative peptidoglycan binding domain PI860_01955 PF00535 Glycosyl transferase family 2 PI860_01970 PF00579 tRNA synthetases class I (W and Y) PI860_01975 PF08525 Opacity-associated protein A N-terminal motif PI860_01975 PF01476 LysM domain PI860_01975 PF01551 Peptidase family M23 PI860_01980 PF03702 Anhydro-N-acetylmuramic acid kinase PI860_01985 PF01042 Endoribonuclease L-PSP PI860_01995 PF02779 Transketolase, pyrimidine binding domain PI860_01995 PF00456 Transketolase, thiamine diphosphate binding domain PI860_01995 PF02780 Transketolase, C-terminal domain PI860_02000 PF02773 S-adenosylmethionine synthetase, C-terminal domain PI860_02000 PF02772 S-adenosylmethionine synthetase, central domain PI860_02000 PF00438 S-adenosylmethionine synthetase, N-terminal domain PI860_02005 PF10263 SprT-like family PI860_02005 PF17283 SprT-like zinc ribbon domain PI860_02010 PF04231 Endonuclease I PI860_02015 PF04452 RNA methyltransferase PI860_02020 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PI860_02020 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PI860_02025 PF00672 HAMP domain PI860_02025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_02030 PF12729 Four helix bundle sensory module for signal transduction PI860_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_02030 PF00672 HAMP domain PI860_02035 PF02622 Uncharacterized ACR, COG1678 PI860_02040 PF03652 Holliday junction resolvase PI860_02045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_02045 PF03466 LysR substrate binding domain PI860_02050 PF07690 Major Facilitator Superfamily PI860_02055 PF00144 Beta-lactamase PI860_02060 PF07726 ATPase family associated with various cellular activities (AAA) PI860_02060 PF17863 AAA lid domain PI860_02070 PF01841 Transglutaminase-like superfamily PI860_02070 PF11992 Domain of unknown function (DUF3488) PI860_02070 PF13559 Domain of unknown function (DUF4129) PI860_02075 PF01235 Sodium:alanine symporter family PI860_02080 PF00923 Transaldolase/Fructose-6-phosphate aldolase PI860_02095 PF03167 Uracil DNA glycosylase superfamily PI860_02105 PF13592 Winged helix-turn helix PI860_02105 PF13358 DDE superfamily endonuclease PI860_02110 PF01228 Glycine radical PI860_02115 PF00375 Sodium:dicarboxylate symporter family PI860_02120 PF00793 DAHP synthetase I family PI860_02135 PF13847 Methyltransferase domain PI860_02135 PF17827 PrmC N-terminal domain PI860_02140 PF00472 RF-1 domain PI860_02140 PF03462 PCRF domain PI860_02145 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PI860_02145 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PI860_02145 PF01488 Shikimate / quinate 5-dehydrogenase PI860_02150 PF03550 Outer membrane lipoprotein LolB PI860_02155 PF00288 GHMP kinases N terminal domain PI860_02155 PF08544 GHMP kinases C terminal PI860_02165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PI860_02165 PF14572 Phosphoribosyl synthetase-associated domain PI860_02170 PF02872 5'-nucleotidase, C-terminal domain PI860_02170 PF00149 Calcineurin-like phosphoesterase PI860_02175 PF01195 Peptidyl-tRNA hydrolase PI860_02180 PF01926 50S ribosome-binding GTPase PI860_02180 PF06071 Protein of unknown function (DUF933) PI860_02245 PF02080 TrkA-C domain PI860_02245 PF03600 Citrate transporter PI860_02250 PF04973 Nicotinamide mononucleotide transporter PI860_02255 PF01048 Phosphorylase superfamily PI860_02265 PF04266 ASCH domain PI860_02270 PF07859 alpha/beta hydrolase fold PI860_02285 PF00012 Hsp70 protein PI860_02295 PF16657 Maltogenic Amylase, C-terminal domain PI860_02295 PF00128 Alpha amylase, catalytic domain PI860_02305 PF12848 ABC transporter PI860_02305 PF00005 ABC transporter PI860_02310 PF07690 Major Facilitator Superfamily PI860_02315 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PI860_02315 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PI860_02315 PF10371 Domain of unknown function PI860_02315 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PI860_02315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PI860_02320 PF07690 Major Facilitator Superfamily PI860_02325 PF13419 Haloacid dehalogenase-like hydrolase PI860_02335 PF00171 Aldehyde dehydrogenase family PI860_02340 PF04958 Arginine N-succinyltransferase beta subunit PI860_02345 PF00202 Aminotransferase class-III PI860_02350 PF00117 Glutamine amidotransferase class-I PI860_02360 PF00579 tRNA synthetases class I (W and Y) PI860_02365 PF13419 Haloacid dehalogenase-like hydrolase PI860_02370 PF00834 Ribulose-phosphate 3 epimerase family PI860_02375 PF02086 D12 class N6 adenine-specific DNA methyltransferase PI860_02385 PF01761 3-dehydroquinate synthase PI860_02390 PF01202 Shikimate kinase PI860_02395 PF03958 Bacterial type II/III secretion system short domain PI860_02395 PF07660 Secretin and TonB N terminus short domain PI860_02395 PF00263 Bacterial type II and III secretion system protein PI860_02395 PF11741 AMIN domain PI860_02415 PF11104 Type IV pilus assembly protein PilM; PI860_02420 PF00905 Penicillin binding protein transpeptidase domain PI860_02420 PF00912 Transglycosylase PI860_02420 PF17092 Penicillin-binding protein OB-like domain PI860_02425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_02425 PF03466 LysR substrate binding domain PI860_02445 PF03466 LysR substrate binding domain PI860_02445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_02460 PF01476 LysM domain PI860_02460 PF08525 Opacity-associated protein A N-terminal motif PI860_02460 PF01551 Peptidase family M23 PI860_02470 PF13592 Winged helix-turn helix PI860_02470 PF13358 DDE superfamily endonuclease PI860_02475 PF12794 Mechanosensitive ion channel inner membrane domain 1 PI860_02475 PF00924 Mechanosensitive ion channel PI860_02475 PF12795 Mechanosensitive ion channel porin domain PI860_02480 PF03009 Glycerophosphoryl diester phosphodiesterase family PI860_02485 PF00672 HAMP domain PI860_02485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_02485 PF02743 Cache domain PI860_02490 PF00890 FAD binding domain PI860_02490 PF02910 Fumarate reductase flavoprotein C-term PI860_02495 PF13085 2Fe-2S iron-sulfur cluster binding domain PI860_02495 PF13183 4Fe-4S dicluster domain PI860_02500 PF02300 Fumarate reductase subunit C PI860_02505 PF02313 Fumarate reductase subunit D PI860_02525 PF06224 Winged helix DNA-binding domain PI860_02540 PF00501 AMP-binding enzyme PI860_02560 PF00486 Transcriptional regulatory protein, C terminal PI860_02560 PF00072 Response regulator receiver domain PI860_02565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_02565 PF00512 His Kinase A (phospho-acceptor) domain PI860_02565 PF08521 Two-component sensor kinase N-terminal PI860_02575 PF00478 IMP dehydrogenase / GMP reductase domain PI860_02585 PF01132 Elongation factor P (EF-P) OB domain PI860_02585 PF08207 Elongation factor P (EF-P) KOW-like domain PI860_02585 PF09285 Elongation factor P, C-terminal PI860_02595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI860_02595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI860_02615 PF13419 Haloacid dehalogenase-like hydrolase PI860_02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_02625 PF03466 LysR substrate binding domain PI860_02630 PF00990 Diguanylate cyclase, GGDEF domain PI860_02630 PF05230 MASE2 domain PI860_02635 PF00313 'Cold-shock' DNA-binding domain PI860_02640 PF01494 FAD binding domain PI860_02645 PF04055 Radical SAM superfamily PI860_02645 PF01938 TRAM domain PI860_02645 PF00919 Uncharacterized protein family UPF0004 PI860_02650 PF02562 PhoH-like protein PI860_02655 PF02130 Uncharacterized protein family UPF0054 PI860_02660 PF00571 CBS domain PI860_02660 PF03471 Transporter associated domain PI860_02665 PF00795 Carbon-nitrogen hydrolase PI860_02670 PF07295 Zinc-ribbon containing domain PI860_02675 PF08264 Anticodon-binding domain of tRNA PI860_02675 PF00133 tRNA synthetases class I (I, L, M and V) PI860_02675 PF13603 Leucyl-tRNA synthetase, Domain 2 PI860_02695 PF01467 Cytidylyltransferase-like PI860_02705 PF02590 Predicted SPOUT methyltransferase PI860_02710 PF03717 Penicillin-binding Protein dimerisation domain PI860_02710 PF00905 Penicillin binding protein transpeptidase domain PI860_02715 PF01098 Cell cycle protein PI860_02725 PF03330 Lytic transglycolase PI860_02725 PF05036 Sporulation related domain PI860_02730 PF07943 Penicillin-binding protein 5, C-terminal domain PI860_02730 PF00768 D-alanyl-D-alanine carboxypeptidase PI860_02735 PF04359 Protein of unknown function (DUF493) PI860_02740 PF03099 Biotin/lipoate A/B protein ligase family PI860_02745 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PI860_02745 PF04055 Radical SAM superfamily PI860_02760 PF01734 Patatin-like phospholipase PI860_02785 PF01695 IstB-like ATP binding protein PI860_02790 PF00665 Integrase core domain PI860_02805 PF00665 Integrase core domain PI860_02825 PF13302 Acetyltransferase (GNAT) domain PI860_02830 PF06821 Serine hydrolase PI860_02835 PF02508 Rnf-Nqr subunit, membrane protein PI860_02845 PF17768 RecJ OB domain PI860_02845 PF02272 DHHA1 domain PI860_02845 PF01368 DHH family PI860_02855 PF01741 Large-conductance mechanosensitive channel, MscL PI860_02860 PF00990 Diguanylate cyclase, GGDEF domain PI860_02865 PF02899 Phage integrase, N-terminal SAM-like domain PI860_02865 PF00589 Phage integrase family PI860_02870 PF00258 Flavodoxin PI860_02875 PF01523 Putative modulator of DNA gyrase PI860_02880 PF01523 Putative modulator of DNA gyrase PI860_02890 PF17969 L,D-transpeptidase C-terminal domain PI860_02890 PF03734 L,D-transpeptidase catalytic domain PI860_02895 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase PI860_02900 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PI860_02910 PF13358 DDE superfamily endonuclease PI860_02910 PF13592 Winged helix-turn helix PI860_02925 PF03575 Peptidase family S51 PI860_02935 PF06476 Protein of unknown function (DUF1090) PI860_02940 PF02635 DsrE/DsrF-like family PI860_02945 PF00990 Diguanylate cyclase, GGDEF domain PI860_02955 PF03725 3' exoribonuclease family, domain 2 PI860_02955 PF00013 KH domain PI860_02955 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PI860_02955 PF01138 3' exoribonuclease family, domain 1 PI860_02955 PF00575 S1 RNA binding domain PI860_02960 PF00312 Ribosomal protein S15 PI860_02965 PF09157 Pseudouridine synthase II TruB, C-terminal PI860_02965 PF16198 tRNA pseudouridylate synthase B C-terminal domain PI860_02965 PF01509 TruB family pseudouridylate synthase (N terminal domain) PI860_02970 PF02033 Ribosome-binding factor A PI860_02975 PF08364 Bacterial translation initiation factor IF-2 associated region PI860_02975 PF04760 Translation initiation factor IF-2, N-terminal region PI860_02975 PF11987 Translation-initiation factor 2 PI860_02975 PF00009 Elongation factor Tu GTP binding domain PI860_02980 PF00575 S1 RNA binding domain PI860_02980 PF08529 NusA N-terminal domain PI860_02980 PF13184 NusA-like KH domain PI860_02985 PF02576 RimP N-terminal domain PI860_02985 PF17384 RimP C-terminal SH3 domain PI860_03000 PF03840 Preprotein translocase SecG subunit PI860_03005 PF00121 Triosephosphate isomerase PI860_03010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PI860_03010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PI860_03010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PI860_03010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PI860_03015 PF00809 Pterin binding enzyme PI860_03020 PF06480 FtsH Extracellular PI860_03020 PF17862 AAA+ lid domain PI860_03020 PF00004 ATPase family associated with various cellular activities (AAA) PI860_03020 PF01434 Peptidase family M41 PI860_03025 PF01728 FtsJ-like methyltransferase PI860_03030 PF01985 CRS1 / YhbY (CRM) domain PI860_03040 PF01272 Transcription elongation factor, GreA/GreB, C-term PI860_03040 PF03449 Transcription elongation factor, N-terminal PI860_03060 PF13677 Membrane MotB of proton-channel complex MotA/MotB PI860_03060 PF00691 OmpA family PI860_03065 PF01618 MotA/TolQ/ExbB proton channel family PI860_03070 PF02609 Exonuclease VII small subunit PI860_03075 PF00348 Polyprenyl synthetase PI860_03080 PF02779 Transketolase, pyrimidine binding domain PI860_03080 PF02780 Transketolase, C-terminal domain PI860_03080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PI860_03085 PF00528 Binding-protein-dependent transport system inner membrane component PI860_03085 PF12911 N-terminal TM domain of oligopeptide transport permease C PI860_03090 PF00528 Binding-protein-dependent transport system inner membrane component PI860_03095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_03100 PF00005 ABC transporter PI860_03100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI860_03105 PF04608 Phosphatidylglycerophosphatase A PI860_03110 PF00586 AIR synthase related protein, N-terminal domain PI860_03110 PF02769 AIR synthase related protein, C-terminal domain PI860_03115 PF01029 NusB family PI860_03120 PF00885 6,7-dimethyl-8-ribityllumazine synthase PI860_03125 PF00925 GTP cyclohydrolase II PI860_03125 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PI860_03130 PF00677 Lumazine binding domain PI860_03135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PI860_03135 PF01872 RibD C-terminal domain PI860_03140 PF03477 ATP cone domain PI860_03155 PF00464 Serine hydroxymethyltransferase PI860_03170 PF02613 Nitrate reductase delta subunit PI860_03190 PF03707 Bacterial signalling protein N terminal repeat PI860_03190 PF00990 Diguanylate cyclase, GGDEF domain PI860_03190 PF00563 EAL domain PI860_03200 PF16177 Acetyl-coenzyme A synthetase N-terminus PI860_03200 PF00501 AMP-binding enzyme PI860_03200 PF13193 AMP-binding enzyme C-terminal domain PI860_03205 PF01220 Dehydroquinase class II PI860_03210 PF00364 Biotin-requiring enzyme PI860_03215 PF02785 Biotin carboxylase C-terminal domain PI860_03215 PF00289 Biotin carboxylase, N-terminal domain PI860_03215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PI860_03220 PF06196 Protein of unknown function (DUF997) PI860_03225 PF00474 Sodium:solute symporter family PI860_03230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PI860_03230 PF00367 phosphotransferase system, EIIB PI860_03230 PF02378 Phosphotransferase system, EIIC PI860_03235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_03235 PF03466 LysR substrate binding domain PI860_03240 PF08240 Alcohol dehydrogenase GroES-like domain PI860_03240 PF00107 Zinc-binding dehydrogenase PI860_03255 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PI860_03260 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PI860_03265 PF01842 ACT domain PI860_03265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI860_03265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI860_03270 PF14602 Hexapeptide repeat of succinyl-transferase PI860_03270 PF12464 Maltose acetyltransferase PI860_03275 PF02743 Cache domain PI860_03275 PF00672 HAMP domain PI860_03275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_03285 PF00881 Nitroreductase family PI860_03290 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_03290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PI860_03295 PF01343 Peptidase family S49 PI860_03310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PI860_03310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PI860_03315 PF07023 Protein of unknown function (DUF1315) PI860_03320 PF00710 Asparaginase, N-terminal PI860_03320 PF17763 Glutaminase/Asparaginase C-terminal domain PI860_03325 PF03616 Sodium/glutamate symporter PI860_03330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_03330 PF00672 HAMP domain PI860_03330 PF02743 Cache domain PI860_03340 PF01336 OB-fold nucleic acid binding domain PI860_03340 PF00152 tRNA synthetases class II (D, K and N) PI860_03345 PF02567 Phenazine biosynthesis-like protein PI860_03360 PF01507 Phosphoadenosine phosphosulfate reductase family PI860_03365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PI860_03370 PF00528 Binding-protein-dependent transport system inner membrane component PI860_03375 PF00571 CBS domain PI860_03375 PF00005 ABC transporter PI860_03380 PF00186 Dihydrofolate reductase PI860_03385 PF12821 Threonine/Serine exporter, ThrE PI860_03395 PF06738 Putative threonine/serine exporter PI860_03405 PF00994 Probable molybdopterin binding domain PI860_03415 PF02801 Beta-ketoacyl synthase, C-terminal domain PI860_03415 PF00109 Beta-ketoacyl synthase, N-terminal domain PI860_03430 PF02801 Beta-ketoacyl synthase, C-terminal domain PI860_03430 PF00109 Beta-ketoacyl synthase, N-terminal domain PI860_03455 PF00221 Aromatic amino acid lyase PI860_03465 PF07977 FabA-like domain PI860_03470 PF13193 AMP-binding enzyme C-terminal domain PI860_03470 PF00501 AMP-binding enzyme PI860_03480 PF00550 Phosphopantetheine attachment site PI860_03485 PF00550 Phosphopantetheine attachment site PI860_03520 PF03150 Di-haem cytochrome c peroxidase PI860_03520 PF00034 Cytochrome c PI860_03525 PF00194 Eukaryotic-type carbonic anhydrase PI860_03530 PF04227 Indigoidine synthase A like protein PI860_03535 PF00294 pfkB family carbohydrate kinase PI860_03555 PF00582 Universal stress protein family PI860_03565 PF00171 Aldehyde dehydrogenase family PI860_03570 PF01472 PUA domain PI860_03570 PF00696 Amino acid kinase family PI860_03575 PF07417 Sigma factor-binding transcriptional regulator Crl PI860_03580 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) PI860_03585 PF00156 Phosphoribosyl transferase domain PI860_03595 PF01546 Peptidase family M20/M25/M40 PI860_03595 PF07687 Peptidase dimerisation domain PI860_03600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI860_03600 PF00005 ABC transporter PI860_03605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI860_03605 PF00005 ABC transporter PI860_03610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_03615 PF00528 Binding-protein-dependent transport system inner membrane component PI860_03615 PF12911 N-terminal TM domain of oligopeptide transport permease C PI860_03620 PF00528 Binding-protein-dependent transport system inner membrane component PI860_03625 PF00528 Binding-protein-dependent transport system inner membrane component PI860_03630 PF07715 TonB-dependent Receptor Plug Domain PI860_03630 PF00593 TonB dependent receptor PI860_03640 PF01618 MotA/TolQ/ExbB proton channel family PI860_03645 PF01618 MotA/TolQ/ExbB proton channel family PI860_03650 PF02472 Biopolymer transport protein ExbD/TolR PI860_03665 PF06483 Chitinase C PI860_03665 PF00704 Glycosyl hydrolases family 18 PI860_03695 PF00749 tRNA synthetases class I (E and Q), catalytic domain PI860_03700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_03700 PF00672 HAMP domain PI860_03710 PF00313 'Cold-shock' DNA-binding domain PI860_03740 PF00929 Exonuclease PI860_03745 PF03193 RsgA GTPase PI860_03750 PF02666 Phosphatidylserine decarboxylase PI860_03755 PF09905 DNA-binding protein VF530 PI860_03775 PF00990 Diguanylate cyclase, GGDEF domain PI860_03775 PF00563 EAL domain PI860_03775 PF03707 Bacterial signalling protein N terminal repeat PI860_03780 PF06877 Regulator of ribonuclease activity B PI860_03785 PF00801 PKD domain PI860_03785 PF05547 Immune inhibitor A peptidase M6 PI860_03810 PF05199 GMC oxidoreductase PI860_03810 PF00732 GMC oxidoreductase PI860_03815 PF05199 GMC oxidoreductase PI860_03815 PF00732 GMC oxidoreductase PI860_03820 PF00171 Aldehyde dehydrogenase family PI860_03825 PF00561 alpha/beta hydrolase fold PI860_03830 PF00664 ABC transporter transmembrane region PI860_03830 PF00005 ABC transporter PI860_03835 PF06004 Bacterial protein of unknown function (DUF903) PI860_03840 PF00581 Rhodanese-like domain PI860_03845 PF04960 Glutaminase PI860_03850 PF04320 Protein with unknown function (DUF469) PI860_03855 PF02390 Putative methyltransferase PI860_03870 PF00563 EAL domain PI860_03870 PF12792 CSS motif domain associated with EAL PI860_03875 PF01370 NAD dependent epimerase/dehydratase family PI860_03875 PF08338 Domain of unknown function (DUF1731) PI860_03885 PF00005 ABC transporter PI860_03890 PF13472 GDSL-like Lipase/Acylhydrolase family PI860_03895 PF01584 CheW-like domain PI860_03895 PF00072 Response regulator receiver domain PI860_03905 PF06826 Predicted Permease Membrane Region PI860_03905 PF02080 TrkA-C domain PI860_03910 PF03006 Haemolysin-III related PI860_03915 PF00282 Pyridoxal-dependent decarboxylase conserved domain PI860_03920 PF04279 Intracellular septation protein A PI860_03925 PF03795 YCII-related domain PI860_03930 PF00459 Inositol monophosphatase family PI860_03940 PF00483 Nucleotidyl transferase PI860_03945 PF00854 POT family PI860_03950 PF00072 Response regulator receiver domain PI860_03980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_03985 PF02321 Outer membrane efflux protein PI860_03990 PF01207 Dihydrouridine synthase (Dus) PI860_03995 PF02954 Bacterial regulatory protein, Fis family PI860_04000 PF01810 LysE type translocator PI860_04030 PF01521 Iron-sulphur cluster biosynthesis PI860_04040 PF00654 Voltage gated chloride channel PI860_04045 PF00202 Aminotransferase class-III PI860_04060 PF01569 PAP2 superfamily PI860_04070 PF11849 Domain of unknown function (DUF3369) PI860_04075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_04075 PF03466 LysR substrate binding domain PI860_04080 PF00893 Small Multidrug Resistance protein PI860_04085 PF00893 Small Multidrug Resistance protein PI860_04090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI860_04095 PF00912 Transglycosylase PI860_04095 PF14814 Bifunctional transglycosylase second domain PI860_04095 PF00905 Penicillin binding protein transpeptidase domain PI860_04100 PF08482 ATP-dependent helicase C-terminal PI860_04100 PF00271 Helicase conserved C-terminal domain PI860_04100 PF04408 Helicase associated domain (HA2) PI860_04100 PF00270 DEAD/DEAH box helicase PI860_04110 PF17746 SfsA N-terminal OB domain PI860_04110 PF03749 Sugar fermentation stimulation protein RE domain PI860_04115 PF01258 Prokaryotic dksA/traR C4-type zinc finger PI860_04120 PF00749 tRNA synthetases class I (E and Q), catalytic domain PI860_04125 PF12627 Probable RNA and SrmB- binding site of polymerase A PI860_04125 PF12626 Polymerase A arginine-rich C-terminus PI860_04125 PF01743 Poly A polymerase head domain PI860_04130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PI860_04135 PF02548 Ketopantoate hydroxymethyltransferase PI860_04140 PF02569 Pantoate-beta-alanine ligase PI860_04150 PF01061 ABC-2 type transporter PI860_04155 PF00005 ABC transporter PI860_04160 PF00156 Phosphoribosyl transferase domain PI860_04165 PF00440 Bacterial regulatory proteins, tetR family PI860_04170 PF02441 Flavoprotein PI860_04175 PF08245 Mur ligase middle domain PI860_04175 PF01225 Mur ligase family, catalytic domain PI860_04175 PF02875 Mur ligase family, glutamate ligase domain PI860_04180 PF00719 Inorganic pyrophosphatase PI860_04185 PF01208 Uroporphyrinogen decarboxylase (URO-D) PI860_04190 PF09297 NADH pyrophosphatase zinc ribbon domain PI860_04190 PF00293 NUDIX domain PI860_04195 PF00171 Aldehyde dehydrogenase family PI860_04195 PF14850 DNA-binding domain of Proline dehydrogenase PI860_04195 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PI860_04195 PF01619 Proline dehydrogenase PI860_04200 PF08239 Bacterial SH3 domain PI860_04205 PF07885 Ion channel PI860_04205 PF00027 Cyclic nucleotide-binding domain PI860_04215 PF01641 SelR domain PI860_04220 PF00128 Alpha amylase, catalytic domain PI860_04220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PI860_04225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PI860_04225 PF00128 Alpha amylase, catalytic domain PI860_04225 PF02806 Alpha amylase, C-terminal all-beta domain PI860_04230 PF02446 4-alpha-glucanotransferase PI860_04235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PI860_04235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PI860_04240 PF01263 Aldose 1-epimerase PI860_04245 PF02445 Quinolinate synthetase A protein PI860_04315 PF16331 TolA binding protein trimerisation PI860_04315 PF13174 Tetratricopeptide repeat PI860_04320 PF00691 OmpA family PI860_04325 PF04052 TolB amino-terminal domain PI860_04325 PF07676 WD40-like Beta Propeller Repeat PI860_04335 PF02472 Biopolymer transport protein ExbD/TolR PI860_04340 PF01618 MotA/TolQ/ExbB proton channel family PI860_04345 PF03061 Thioesterase superfamily PI860_04350 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) PI860_04355 PF08173 Membrane bound YbgT-like protein PI860_04360 PF02322 Cytochrome bd terminal oxidase subunit II PI860_04365 PF01654 Cytochrome bd terminal oxidase subunit I PI860_04370 PF17864 RuvB AAA lid domain PI860_04370 PF05491 RuvB C-terminal winged helix domain PI860_04370 PF05496 Holliday junction DNA helicase RuvB P-loop domain PI860_04375 PF07499 RuvA, C-terminal domain PI860_04375 PF01330 RuvA N terminal domain PI860_04380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_04380 PF00672 HAMP domain PI860_04385 PF04073 Aminoacyl-tRNA editing domain PI860_04385 PF03129 Anticodon binding domain PI860_04385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PI860_04395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PI860_04405 PF00009 Elongation factor Tu GTP binding domain PI860_04405 PF03144 Elongation factor Tu domain 2 PI860_04405 PF16658 Class II release factor RF3, C-terminal domain PI860_04410 PF00072 Response regulator receiver domain PI860_04410 PF00990 Diguanylate cyclase, GGDEF domain PI860_04420 PF01037 Lrp/AsnC ligand binding domain PI860_04430 PF05762 VWA domain containing CoxE-like protein PI860_04435 PF17868 AAA lid domain PI860_04435 PF12592 Protein of unknown function (DUF3763) PI860_04435 PF07728 AAA domain (dynein-related subfamily) PI860_04445 PF00583 Acetyltransferase (GNAT) family PI860_04445 PF13673 Acetyltransferase (GNAT) domain PI860_04455 PF00501 AMP-binding enzyme PI860_04465 PF04262 Glutamate-cysteine ligase PI860_04470 PF00675 Insulinase (Peptidase family M16) PI860_04470 PF05193 Peptidase M16 inactive domain PI860_04475 PF09335 SNARE associated Golgi protein PI860_04480 PF08240 Alcohol dehydrogenase GroES-like domain PI860_04480 PF00107 Zinc-binding dehydrogenase PI860_04505 PF00970 Oxidoreductase FAD-binding domain PI860_04505 PF00175 Oxidoreductase NAD-binding domain PI860_04510 PF03948 Ribosomal protein L9, C-terminal domain PI860_04510 PF01281 Ribosomal protein L9, N-terminal domain PI860_04515 PF01084 Ribosomal protein S18 PI860_04520 PF01250 Ribosomal protein S6 PI860_04525 PF01566 Natural resistance-associated macrophage protein PI860_04545 PF13673 Acetyltransferase (GNAT) domain PI860_04555 PF00588 SpoU rRNA Methylase family PI860_04555 PF08032 RNA 2'-O ribose methyltransferase substrate binding PI860_04560 PF00575 S1 RNA binding domain PI860_04560 PF17876 Cold shock domain PI860_04560 PF08206 Ribonuclease B OB domain PI860_04560 PF00773 RNB domain PI860_04560 PF08461 Ribonuclease R winged-helix domain PI860_04565 PF00990 Diguanylate cyclase, GGDEF domain PI860_04570 PF02664 S-Ribosylhomocysteinase (LuxS) PI860_04580 PF00543 Nitrogen regulatory protein P-II PI860_04585 PF00795 Carbon-nitrogen hydrolase PI860_04585 PF02540 NAD synthase PI860_04600 PF05567 Neisseria PilC beta-propeller domain PI860_04620 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor PI860_04620 PF07963 Prokaryotic N-terminal methylation motif PI860_04625 PF02401 LytB protein PI860_04630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI860_04635 PF01252 Signal peptidase (SPase) II PI860_04640 PF00133 tRNA synthetases class I (I, L, M and V) PI860_04640 PF08264 Anticodon-binding domain of tRNA PI860_04640 PF06827 Zinc finger found in FPG and IleRS PI860_04645 PF01687 Riboflavin kinase PI860_04645 PF06574 FAD synthetase PI860_04650 PF03023 Lipid II flippase MurJ PI860_04655 PF01649 Ribosomal protein S20 PI860_04660 PF01022 Bacterial regulatory protein, arsR family PI860_04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_04665 PF03466 LysR substrate binding domain PI860_04675 PF06965 Na+/H+ antiporter 1 PI860_04680 PF00303 Thymidylate synthase PI860_04685 PF01790 Prolipoprotein diacylglyceryl transferase PI860_04690 PF02896 PEP-utilising enzyme, TIM barrel domain PI860_04690 PF01590 GAF domain PI860_04690 PF05524 PEP-utilising enzyme, N-terminal PI860_04690 PF00391 PEP-utilising enzyme, mobile domain PI860_04695 PF00293 NUDIX domain PI860_04700 PF02976 DNA mismatch repair enzyme MutH PI860_04710 PF01245 Ribosomal protein L19 PI860_04715 PF01746 tRNA (Guanine-1)-methyltransferase PI860_04720 PF01782 RimM N-terminal domain PI860_04720 PF05239 PRC-barrel domain PI860_04725 PF00886 Ribosomal protein S16 PI860_04730 PF00448 SRP54-type protein, GTPase domain PI860_04730 PF02881 SRP54-type protein, helical bundle domain PI860_04730 PF02978 Signal peptide binding domain PI860_04735 PF01578 Cytochrome C assembly protein PI860_04740 PF00571 CBS domain PI860_04740 PF03471 Transporter associated domain PI860_04740 PF01595 Cyclin M transmembrane N-terminal domain PI860_04745 PF02082 Transcriptional regulator PI860_04750 PF00970 Oxidoreductase FAD-binding domain PI860_04750 PF00042 Globin PI860_04750 PF00175 Oxidoreductase NAD-binding domain PI860_04755 PF08238 Sel1 repeat PI860_04760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PI860_04760 PF00056 lactate/malate dehydrogenase, NAD binding domain PI860_04765 PF00528 Binding-protein-dependent transport system inner membrane component PI860_04775 PF00528 Binding-protein-dependent transport system inner membrane component PI860_04780 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_04785 PF00005 ABC transporter PI860_04790 PF01316 Arginine repressor, DNA binding domain PI860_04790 PF02863 Arginine repressor, C-terminal domain PI860_04795 PF04261 Dyp-type peroxidase family PI860_04800 PF00005 ABC transporter PI860_04800 PF08402 TOBE domain PI860_04810 PF13416 Bacterial extracellular solute-binding protein PI860_04815 PF00543 Nitrogen regulatory protein P-II PI860_04820 PF00472 RF-1 domain PI860_04825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PI860_04825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PI860_04830 PF01773 Na+ dependent nucleoside transporter N-terminus PI860_04830 PF07662 Na+ dependent nucleoside transporter C-terminus PI860_04830 PF07670 Nucleoside recognition PI860_04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_04835 PF03466 LysR substrate binding domain PI860_04840 PF00255 Glutathione peroxidase PI860_04850 PF02595 Glycerate kinase family PI860_04855 PF02447 GntP family permease PI860_04855 PF02447 GntP family permease PI860_04860 PF05651 Putative sugar diacid recognition PI860_04860 PF17853 GGDEF-like domain PI860_04860 PF13556 PucR C-terminal helix-turn-helix domain PI860_04865 PF06062 Uncharacterised protein family (UPF0231) PI860_04880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_04880 PF08447 PAS fold PI860_04885 PF03372 Endonuclease/Exonuclease/phosphatase family PI860_04900 PF00270 DEAD/DEAH box helicase PI860_04900 PF00271 Helicase conserved C-terminal domain PI860_04910 PF08534 Redoxin PI860_04915 PF00403 Heavy-metal-associated domain PI860_04920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PI860_04920 PF11852 Domain of unknown function (DUF3372) PI860_04920 PF03714 Bacterial pullanase-associated domain PI860_04920 PF18494 Pullulanase Ins domain PI860_04920 PF17967 Pullulanase N2 domain PI860_04935 PF02583 Metal-sensitive transcriptional repressor PI860_04940 PF00155 Aminotransferase class I and II PI860_04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_04945 PF03466 LysR substrate binding domain PI860_04960 PF11230 Protein of unknown function (DUF3029) PI860_04995 PF00535 Glycosyl transferase family 2 PI860_05000 PF14883 Hypothetical glycosyl hydrolase family 13 PI860_05000 PF01522 Polysaccharide deacetylase PI860_05005 PF14883 Hypothetical glycosyl hydrolase family 13 PI860_05005 PF01522 Polysaccharide deacetylase PI860_05045 PF00672 HAMP domain PI860_05045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_05045 PF17200 Single Cache domain 2 PI860_05050 PF18416 N-acetylglucosamine binding protein domain 2 PI860_05050 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading PI860_05055 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_05060 PF00005 ABC transporter PI860_05065 PF00528 Binding-protein-dependent transport system inner membrane component PI860_05070 PF00528 Binding-protein-dependent transport system inner membrane component PI860_05075 PF00291 Pyridoxal-phosphate dependent enzyme PI860_05080 PF03466 LysR substrate binding domain PI860_05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_05085 PF00005 ABC transporter PI860_05085 PF12857 TOBE-like domain PI860_05090 PF00528 Binding-protein-dependent transport system inner membrane component PI860_05095 PF00528 Binding-protein-dependent transport system inner membrane component PI860_05110 PF13194 Domain of unknown function (DUF4010) PI860_05115 PF12464 Maltose acetyltransferase PI860_05115 PF14602 Hexapeptide repeat of succinyl-transferase PI860_05145 PF14552 Tautomerase enzyme PI860_05155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_05155 PF03466 LysR substrate binding domain PI860_05160 PF00206 Lyase PI860_05160 PF14698 Argininosuccinate lyase C-terminal PI860_05165 PF00764 Arginosuccinate synthase PI860_05170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PI860_05170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PI860_05175 PF00696 Amino acid kinase family PI860_05180 PF01118 Semialdehyde dehydrogenase, NAD binding domain PI860_05180 PF02774 Semialdehyde dehydrogenase, dimerisation domain PI860_05185 PF07687 Peptidase dimerisation domain PI860_05185 PF01546 Peptidase family M20/M25/M40 PI860_05190 PF00311 Phosphoenolpyruvate carboxylase PI860_05205 PF03960 ArsC family PI860_05210 PF01758 Sodium Bile acid symporter family PI860_05220 PF06953 Arsenical resistance operon trans-acting repressor ArsD PI860_05230 PF01624 MutS domain I PI860_05230 PF05188 MutS domain II PI860_05230 PF05192 MutS domain III PI860_05230 PF00488 MutS domain V PI860_05230 PF05190 MutS family domain IV PI860_05235 PF02028 BCCT, betaine/carnitine/choline family transporter PI860_05250 PF04222 Protein of unknown function (DUF416) PI860_05255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI860_05260 PF08525 Opacity-associated protein A N-terminal motif PI860_05260 PF01476 LysM domain PI860_05260 PF01551 Peptidase family M23 PI860_05280 PF01297 Zinc-uptake complex component A periplasmic PI860_05285 PF00005 ABC transporter PI860_05290 PF00950 ABC 3 transport family PI860_05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_05295 PF03466 LysR substrate binding domain PI860_05305 PF03167 Uracil DNA glycosylase superfamily PI860_05310 PF00892 EamA-like transporter family PI860_05320 PF01541 GIY-YIG catalytic domain PI860_05335 PF04012 PspA/IM30 family PI860_05340 PF01553 Acyltransferase PI860_05360 PF00085 Thioredoxin PI860_05365 PF07681 DoxX PI860_05370 PF00226 DnaJ domain PI860_05370 PF01556 DnaJ C terminal domain PI860_05370 PF00684 DnaJ central domain PI860_05405 PF00521 DNA gyrase/topoisomerase IV, subunit A PI860_05405 PF03989 DNA gyrase C-terminal domain, beta-propeller PI860_05410 PF00986 DNA gyrase B subunit, carboxyl terminus PI860_05410 PF01751 Toprim domain PI860_05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_05410 PF00204 DNA gyrase B PI860_05420 PF00293 NUDIX domain PI860_05425 PF05728 Uncharacterised protein family (UPF0227) PI860_05430 PF00149 Calcineurin-like phosphoesterase PI860_05435 PF06853 Protein of unknown function (DUF1249) PI860_05440 PF00293 NUDIX domain PI860_05445 PF13592 Winged helix-turn helix PI860_05445 PF13358 DDE superfamily endonuclease PI860_05450 PF02321 Outer membrane efflux protein PI860_05455 PF01467 Cytidylyltransferase-like PI860_05455 PF00294 pfkB family carbohydrate kinase PI860_05460 PF03279 Bacterial lipid A biosynthesis acyltransferase PI860_05475 PF01865 Protein of unknown function DUF47 PI860_05480 PF01384 Phosphate transporter family PI860_05485 PF12627 Probable RNA and SrmB- binding site of polymerase A PI860_05485 PF01966 HD domain PI860_05485 PF01743 Poly A polymerase head domain PI860_05490 PF13401 AAA domain PI860_05490 PF01471 Putative peptidoglycan binding domain PI860_05495 PF16537 Type II secretion system protein B PI860_05500 PF14815 NUDIX domain PI860_05500 PF10576 Iron-sulfur binding domain of endonuclease III PI860_05500 PF00633 Helix-hairpin-helix motif PI860_05500 PF00730 HhH-GPD superfamily base excision DNA repair protein PI860_05505 PF04362 Bacterial Fe(2+) trafficking PI860_05510 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain PI860_05510 PF01464 Transglycosylase SLT domain PI860_05515 PF04076 Bacterial OB fold (BOF) protein PI860_05520 PF00657 GDSL-like Lipase/Acylhydrolase PI860_05530 PF00691 OmpA family PI860_05530 PF01389 OmpA-like transmembrane domain PI860_05535 PF03886 ABC-type transport auxiliary lipoprotein component PI860_05540 PF02470 MlaD protein PI860_05545 PF04403 Paraquat-inducible protein A PI860_05550 PF17209 Hfq protein PI860_05555 PF13419 Haloacid dehalogenase-like hydrolase PI860_05570 PF00701 Dihydrodipicolinate synthetase family PI860_05575 PF05175 Methyltransferase small domain PI860_05575 PF08468 Methyltransferase small domain N-terminal PI860_05580 PF00483 Nucleotidyl transferase PI860_05585 PF08323 Starch synthase catalytic domain PI860_05585 PF00534 Glycosyl transferases group 1 PI860_05625 PF03553 Na+/H+ antiporter family PI860_05635 PF12464 Maltose acetyltransferase PI860_05635 PF14602 Hexapeptide repeat of succinyl-transferase PI860_05640 PF00128 Alpha amylase, catalytic domain PI860_05640 PF11941 Domain of unknown function (DUF3459) PI860_05650 PF00356 Bacterial regulatory proteins, lacI family PI860_05660 PF02378 Phosphotransferase system, EIIC PI860_05665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI860_05670 PF02378 Phosphotransferase system, EIIC PI860_05675 PF00232 Glycosyl hydrolase family 1 PI860_05680 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit PI860_05685 PF00480 ROK family PI860_05695 PF00356 Bacterial regulatory proteins, lacI family PI860_05705 PF17763 Glutaminase/Asparaginase C-terminal domain PI860_05705 PF00710 Asparaginase, N-terminal PI860_05720 PF02142 MGS-like domain PI860_05730 PF00210 Ferritin-like domain PI860_05745 PF17176 tRNA-binding domain PI860_05745 PF05127 Helicase PI860_05745 PF13718 GNAT acetyltransferase 2 PI860_05745 PF08351 Domain of unknown function (DUF1726) PI860_05750 PF00106 short chain dehydrogenase PI860_05755 PF00072 Response regulator receiver domain PI860_05755 PF01584 CheW-like domain PI860_05765 PF07670 Nucleoside recognition PI860_05865 PF02660 Glycerol-3-phosphate acyltransferase PI860_05870 PF02152 Dihydroneopterin aldolase PI860_05875 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PI860_05885 PF07690 Major Facilitator Superfamily PI860_05890 PF07683 Cobalamin synthesis protein cobW C-terminal domain PI860_05890 PF02492 CobW/HypB/UreG, nucleotide-binding domain PI860_05900 PF01810 LysE type translocator PI860_05905 PF03466 LysR substrate binding domain PI860_05905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_05910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_05910 PF03466 LysR substrate binding domain PI860_05920 PF00563 EAL domain PI860_05920 PF12792 CSS motif domain associated with EAL PI860_05925 PF06434 Aconitate hydratase 2 N-terminus PI860_05925 PF11791 Aconitate B N-terminal domain PI860_05925 PF00330 Aconitase family (aconitate hydratase) PI860_05940 PF12729 Four helix bundle sensory module for signal transduction PI860_05940 PF00672 HAMP domain PI860_05940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_05950 PF08448 PAS fold PI860_05950 PF00990 Diguanylate cyclase, GGDEF domain PI860_05950 PF08447 PAS fold PI860_05950 PF05231 MASE1 PI860_05950 PF13426 PAS domain PI860_05950 PF00563 EAL domain PI860_05955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PI860_05955 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_05960 PF00364 Biotin-requiring enzyme PI860_05960 PF02817 e3 binding domain PI860_05960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PI860_05965 PF17831 Pyruvate dehydrogenase E1 component middle domain PI860_05965 PF00456 Transketolase, thiamine diphosphate binding domain PI860_05970 PF07729 FCD domain PI860_05970 PF00392 Bacterial regulatory proteins, gntR family PI860_05975 PF01510 N-acetylmuramoyl-L-alanine amidase PI860_05985 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PI860_05985 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PI860_05990 PF07963 Prokaryotic N-terminal methylation motif PI860_05995 PF00437 Type II/IV secretion system protein PI860_05995 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PI860_06005 PF06750 Bacterial Peptidase A24 N-terminal domain PI860_06005 PF01478 Type IV leader peptidase family PI860_06010 PF01121 Dephospho-CoA kinase PI860_06015 PF07072 Cell division protein PI860_06020 PF03884 DNA gyrase inhibitor YacG PI860_06025 PF00293 NUDIX domain PI860_06035 PF02810 SEC-C motif PI860_06035 PF07517 SecA DEAD-like domain PI860_06035 PF01043 SecA preprotein cross-linking domain PI860_06035 PF07516 SecA Wing and Scaffold domain PI860_06045 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PI860_06050 PF12327 FtsZ family, C-terminal domain PI860_06050 PF00091 Tubulin/FtsZ family, GTPase domain PI860_06055 PF02491 SHS2 domain inserted in FTSA PI860_06060 PF08478 POTRA domain, FtsQ-type PI860_06060 PF03799 Cell division protein FtsQ PI860_06065 PF08245 Mur ligase middle domain PI860_06065 PF02875 Mur ligase family, glutamate ligase domain PI860_06065 PF01225 Mur ligase family, catalytic domain PI860_06070 PF03033 Glycosyltransferase family 28 N-terminal domain PI860_06070 PF04101 Glycosyltransferase family 28 C-terminal domain PI860_06075 PF01098 Cell cycle protein PI860_06080 PF08245 Mur ligase middle domain PI860_06080 PF02875 Mur ligase family, glutamate ligase domain PI860_06085 PF00953 Glycosyl transferase family 4 PI860_06085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PI860_06090 PF01225 Mur ligase family, catalytic domain PI860_06090 PF02875 Mur ligase family, glutamate ligase domain PI860_06090 PF08245 Mur ligase middle domain PI860_06095 PF01225 Mur ligase family, catalytic domain PI860_06095 PF02875 Mur ligase family, glutamate ligase domain PI860_06095 PF08245 Mur ligase middle domain PI860_06100 PF03717 Penicillin-binding Protein dimerisation domain PI860_06100 PF00905 Penicillin binding protein transpeptidase domain PI860_06105 PF04999 Cell division protein FtsL PI860_06110 PF01795 MraW methylase family PI860_06115 PF02381 MraZ protein, putative antitoxin-like PI860_06125 PF01464 Transglycosylase SLT domain PI860_06125 PF01476 LysM domain PI860_06130 PF00691 OmpA family PI860_06130 PF13677 Membrane MotB of proton-channel complex MotA/MotB PI860_06135 PF01618 MotA/TolQ/ExbB proton channel family PI860_06160 PF02561 Flagellar protein FliS PI860_06165 PF07195 Flagellar hook-associated protein 2 C-terminus PI860_06165 PF02465 Flagellar hook-associated protein 2 N-terminus PI860_06165 PF07196 Flagellin hook IN motif PI860_06180 PF00669 Bacterial flagellin N-terminal helical region PI860_06180 PF00700 Bacterial flagellin C-terminal helical region PI860_06200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_06200 PF00460 Flagella basal body rod protein PI860_06210 PF02119 Flagellar P-ring protein PI860_06215 PF02107 Flagellar L-ring protein PI860_06220 PF00460 Flagella basal body rod protein PI860_06220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_06225 PF00460 Flagella basal body rod protein PI860_06225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_06230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_06230 PF00460 Flagella basal body rod protein PI860_06230 PF07559 Flagellar basal body protein FlaE PI860_06240 PF03963 Flagellar hook capping protein - N-terminal region PI860_06240 PF13860 FlgD Ig-like domain PI860_06240 PF13861 FlgD Tudor-like domain PI860_06245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI860_06245 PF00460 Flagella basal body rod protein PI860_06250 PF00460 Flagella basal body rod protein PI860_06260 PF04316 Anti-sigma-28 factor, FlgM PI860_06275 PF18269 T3SS EscN ATPase C-terminal domain PI860_06275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI860_06285 PF14841 FliG middle domain PI860_06285 PF14842 FliG N-terminal domain PI860_06285 PF01706 FliG C-terminal domain PI860_06290 PF08345 Flagellar M-ring protein C-terminal PI860_06290 PF01514 Secretory protein of YscJ/FliF family PI860_06295 PF02049 Flagellar hook-basal body complex protein FliE PI860_06300 PF02954 Bacterial regulatory protein, Fis family PI860_06300 PF00072 Response regulator receiver domain PI860_06300 PF00158 Sigma-54 interaction domain PI860_06305 PF00771 FHIPEP family PI860_06310 PF01312 FlhB HrpN YscU SpaS Family PI860_06315 PF01311 Bacterial export proteins, family 1 PI860_06320 PF01313 Bacterial export proteins, family 3 PI860_06325 PF00813 FliP family PI860_06330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI860_06345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PI860_06350 PF04348 LppC putative lipoprotein PI860_06355 PF02021 Uncharacterised protein family UPF0102 PI860_06360 PF13580 SIS domain PI860_06365 PF04972 BON domain PI860_06370 PF04386 Stringent starvation protein B PI860_06375 PF00043 Glutathione S-transferase, C-terminal domain PI860_06375 PF02798 Glutathione S-transferase, N-terminal domain PI860_06380 PF02167 Cytochrome C1 family PI860_06385 PF00033 Cytochrome b/b6/petB PI860_06385 PF00032 Cytochrome b(C-terminal)/b6/petD PI860_06390 PF00355 Rieske [2Fe-2S] domain PI860_06390 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PI860_06395 PF00380 Ribosomal protein S9/S16 PI860_06400 PF00572 Ribosomal protein L13 PI860_06405 PF03969 AFG1-like ATPase PI860_06415 PF00595 PDZ domain PI860_06415 PF13180 PDZ domain PI860_06420 PF13180 PDZ domain PI860_06450 PF01979 Amidohydrolase family PI860_06455 PF03841 L-seryl-tRNA selenium transferase PI860_06460 PF07071 KDGP aldolase PI860_06470 PF00381 PTS HPr component phosphorylation site PI860_06475 PF03668 P-loop ATPase protein family PI860_06480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI860_06485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PI860_06490 PF04552 Sigma-54, DNA binding domain PI860_06490 PF00309 Sigma-54 factor, Activator interacting domain (AID) PI860_06490 PF04963 Sigma-54 factor, core binding domain PI860_06495 PF00005 ABC transporter PI860_06495 PF12399 Branched-chain amino acid ATP-binding cassette transporter PI860_06500 PF03968 OstA-like protein PI860_06505 PF06835 Lipopolysaccharide-assembly, LptC-related PI860_06515 PF01380 SIS domain PI860_06515 PF00571 CBS domain PI860_06520 PF00005 ABC transporter PI860_06525 PF02405 Permease MlaE PI860_06530 PF02470 MlaD protein PI860_06535 PF05494 MlaC protein PI860_06545 PF01722 BolA-like protein PI860_06550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PI860_06555 PF01523 Putative modulator of DNA gyrase PI860_06560 PF04751 Protein of unknown function (DUF615) PI860_06570 PF04363 Protein of unknown function (DUF496) PI860_06600 PF03144 Elongation factor Tu domain 2 PI860_06600 PF00009 Elongation factor Tu GTP binding domain PI860_06600 PF03143 Elongation factor Tu C-terminal domain PI860_06605 PF00679 Elongation factor G C-terminus PI860_06605 PF14492 Elongation Factor G, domain II PI860_06605 PF03764 Elongation factor G, domain IV PI860_06605 PF00009 Elongation factor Tu GTP binding domain PI860_06605 PF03144 Elongation factor Tu domain 2 PI860_06610 PF00177 Ribosomal protein S7p/S5e PI860_06615 PF00164 Ribosomal protein S12/S23 PI860_06620 PF04077 DsrH like protein PI860_06625 PF02635 DsrE/DsrF-like family PI860_06630 PF02635 DsrE/DsrF-like family PI860_06635 PF01042 Endoribonuclease L-PSP PI860_06640 PF13309 HTH domain PI860_06640 PF08348 YheO-like PAS domain PI860_06645 PF04997 RNA polymerase Rpb1, domain 1 PI860_06645 PF00623 RNA polymerase Rpb1, domain 2 PI860_06645 PF04983 RNA polymerase Rpb1, domain 3 PI860_06645 PF05000 RNA polymerase Rpb1, domain 4 PI860_06645 PF04998 RNA polymerase Rpb1, domain 5 PI860_06650 PF04563 RNA polymerase beta subunit PI860_06650 PF04561 RNA polymerase Rpb2, domain 2 PI860_06650 PF04565 RNA polymerase Rpb2, domain 3 PI860_06650 PF10385 RNA polymerase beta subunit external 1 domain PI860_06650 PF00562 RNA polymerase Rpb2, domain 6 PI860_06650 PF04560 RNA polymerase Rpb2, domain 7 PI860_06655 PF16320 Ribosomal protein L7/L12 dimerisation domain PI860_06655 PF00542 Ribosomal protein L7/L12 C-terminal domain PI860_06660 PF00466 Ribosomal protein L10 PI860_06665 PF00687 Ribosomal protein L1p/L10e family PI860_06670 PF00298 Ribosomal protein L11, RNA binding domain PI860_06670 PF03946 Ribosomal protein L11, N-terminal domain PI860_06675 PF02357 Transcription termination factor nusG PI860_06675 PF00467 KOW motif PI860_06680 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PI860_06690 PF03143 Elongation factor Tu C-terminal domain PI860_06690 PF03144 Elongation factor Tu domain 2 PI860_06690 PF00009 Elongation factor Tu GTP binding domain PI860_06705 PF00485 Phosphoribulokinase / Uridine kinase family PI860_06710 PF02237 Biotin protein ligase C terminal domain PI860_06710 PF03099 Biotin/lipoate A/B protein ligase family PI860_06710 PF08279 HTH domain PI860_06715 PF01565 FAD binding domain PI860_06715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PI860_06720 PF02080 TrkA-C domain PI860_06720 PF02254 TrkA-N domain PI860_06725 PF02386 Cation transport protein PI860_06730 PF01751 Toprim domain PI860_06730 PF01131 DNA topoisomerase PI860_06735 PF03264 NapC/NirT cytochrome c family, N-terminal region PI860_06740 PF01568 Molydopterin dinucleotide binding domain PI860_06740 PF00384 Molybdopterin oxidoreductase PI860_06740 PF18364 Molybdopterin oxidoreductase N-terminal domain PI860_06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_06755 PF00486 Transcriptional regulatory protein, C terminal PI860_06755 PF00072 Response regulator receiver domain PI860_06770 PF01794 Ferric reductase like transmembrane component PI860_06775 PF00174 Oxidoreductase molybdopterin binding domain PI860_06780 PF06496 Protein of unknown function (DUF1097) PI860_06785 PF00072 Response regulator receiver domain PI860_06785 PF00158 Sigma-54 interaction domain PI860_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_06795 PF00512 His Kinase A (phospho-acceptor) domain PI860_06815 PF00571 CBS domain PI860_06815 PF01368 DHH family PI860_06815 PF02272 DHHA1 domain PI860_06815 PF01743 Poly A polymerase head domain PI860_06830 PF01037 Lrp/AsnC ligand binding domain PI860_06835 PF03590 Aspartate-ammonia ligase PI860_06840 PF10431 C-terminal, D2-small domain, of ClpB protein PI860_06840 PF00004 ATPase family associated with various cellular activities (AAA) PI860_06840 PF02861 Clp amino terminal domain, pathogenicity island component PI860_06840 PF17871 AAA lid domain PI860_06840 PF07724 AAA domain (Cdc48 subfamily) PI860_06845 PF02578 Multi-copper polyphenol oxidoreductase laccase PI860_06850 PF01479 S4 domain PI860_06850 PF00849 RNA pseudouridylate synthase PI860_06855 PF13525 Outer membrane lipoprotein PI860_06860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PI860_06860 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_06865 PF00375 Sodium:dicarboxylate symporter family PI860_06870 PF03313 Serine dehydratase alpha chain PI860_06875 PF13309 HTH domain PI860_06875 PF08348 YheO-like PAS domain PI860_06885 PF02233 NAD(P) transhydrogenase beta subunit PI860_06890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PI860_06890 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PI860_06890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PI860_06895 PF00465 Iron-containing alcohol dehydrogenase PI860_06900 PF06719 AraC-type transcriptional regulator N-terminus PI860_06900 PF12833 Helix-turn-helix domain PI860_06905 PF08212 Lipocalin-like domain PI860_06910 PF00672 HAMP domain PI860_06910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_06910 PF02743 Cache domain PI860_06915 PF02666 Phosphatidylserine decarboxylase PI860_06930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PI860_06930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PI860_06935 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain PI860_06935 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain PI860_06940 PF01316 Arginine repressor, DNA binding domain PI860_06940 PF02863 Arginine repressor, C-terminal domain PI860_06945 PF03606 C4-dicarboxylate anaerobic carrier PI860_06950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PI860_06950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PI860_06955 PF00696 Amino acid kinase family PI860_06980 PF02743 Cache domain PI860_06980 PF00672 HAMP domain PI860_06980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_06990 PF00005 ABC transporter PI860_06995 PF13407 Periplasmic binding protein domain PI860_07005 PF00356 Bacterial regulatory proteins, lacI family PI860_07010 PF16363 GDP-mannose 4,6 dehydratase PI860_07015 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain PI860_07015 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain PI860_07020 PF00288 GHMP kinases N terminal domain PI860_07020 PF10509 Galactokinase galactose-binding signature PI860_07020 PF08544 GHMP kinases C terminal PI860_07025 PF01263 Aldose 1-epimerase PI860_07030 PF00248 Aldo/keto reductase family PI860_07035 PF02673 Bacitracin resistance protein BacA PI860_07045 PF04542 Sigma-70 region 2 PI860_07045 PF04545 Sigma-70, region 4 PI860_07055 PF05746 DALR anticodon binding domain PI860_07055 PF00750 tRNA synthetases class I (R) PI860_07055 PF03485 Arginyl tRNA synthetase N terminal domain PI860_07065 PF00227 Proteasome subunit PI860_07070 PF10431 C-terminal, D2-small domain, of ClpB protein PI860_07070 PF00004 ATPase family associated with various cellular activities (AAA) PI860_07070 PF07724 AAA domain (Cdc48 subfamily) PI860_07075 PF07690 Major Facilitator Superfamily PI860_07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_07080 PF03466 LysR substrate binding domain PI860_07085 PF18267 Rubredoxin NAD+ reductase C-terminal domain PI860_07085 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PI860_07085 PF04324 BFD-like [2Fe-2S] binding domain PI860_07085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PI860_07085 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_07095 PF13806 Rieske-like [2Fe-2S] domain PI860_07100 PF01226 Formate/nitrite transporter PI860_07105 PF10414 Sirohaem synthase dimerisation region PI860_07105 PF14824 Sirohaem biosynthesis protein central PI860_07105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PI860_07110 PF00571 CBS domain PI860_07110 PF01769 Divalent cation transporter PI860_07110 PF03448 MgtE intracellular N domain PI860_07125 PF03737 Aldolase/RraA PI860_07130 PF02592 Putative vitamin uptake transporter PI860_07140 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PI860_07145 PF00034 Cytochrome c PI860_07150 PF00271 Helicase conserved C-terminal domain PI860_07150 PF09382 RQC domain PI860_07150 PF16124 RecQ zinc-binding PI860_07150 PF00570 HRDC domain PI860_07150 PF00270 DEAD/DEAH box helicase PI860_07155 PF03061 Thioesterase superfamily PI860_07170 PF03475 3-alpha domain PI860_07170 PF03473 MOSC domain PI860_07175 PF00528 Binding-protein-dependent transport system inner membrane component PI860_07180 PF00528 Binding-protein-dependent transport system inner membrane component PI860_07185 PF00005 ABC transporter PI860_07185 PF08402 TOBE domain PI860_07190 PF13416 Bacterial extracellular solute-binding protein PI860_07195 PF13416 Bacterial extracellular solute-binding protein PI860_07200 PF00202 Aminotransferase class-III PI860_07205 PF00120 Glutamine synthetase, catalytic domain PI860_07210 PF01258 Prokaryotic dksA/traR C4-type zinc finger PI860_07220 PF05981 CreA protein PI860_07225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI860_07225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI860_07230 PF00012 Hsp70 protein PI860_07245 PF02903 Alpha amylase, N-terminal ig-like domain PI860_07245 PF00128 Alpha amylase, catalytic domain PI860_07250 PF02719 Polysaccharide biosynthesis protein PI860_07260 PF13592 Winged helix-turn helix PI860_07260 PF13358 DDE superfamily endonuclease PI860_07270 PF08437 Glycosyl transferase family 8 C-terminal PI860_07270 PF01501 Glycosyl transferase family 8 PI860_07290 PF13193 AMP-binding enzyme C-terminal domain PI860_07290 PF00501 AMP-binding enzyme PI860_07310 PF02348 Cytidylyltransferase PI860_07320 PF03102 NeuB family PI860_07320 PF08666 SAF domain PI860_07390 PF05958 tRNA (Uracil-5-)-methyltransferase PI860_07395 PF00072 Response regulator receiver domain PI860_07395 PF00486 Transcriptional regulatory protein, C terminal PI860_07400 PF00512 His Kinase A (phospho-acceptor) domain PI860_07400 PF00672 HAMP domain PI860_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_07410 PF00390 Malic enzyme, N-terminal domain PI860_07410 PF03949 Malic enzyme, NAD binding domain PI860_07415 PF11066 Protein of unknown function (DUF2867) PI860_07415 PF13460 NAD(P)H-binding PI860_07420 PF01197 Ribosomal protein L31 PI860_07425 PF18074 Primosomal protein N C-terminal domain PI860_07425 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PI860_07425 PF17764 3′ DNA-binding domain (3′BD) PI860_07425 PF00270 DEAD/DEAH box helicase PI860_07425 PF00271 Helicase conserved C-terminal domain PI860_07435 PF00440 Bacterial regulatory proteins, tetR family PI860_07445 PF01389 OmpA-like transmembrane domain PI860_07445 PF00691 OmpA family PI860_07450 PF00291 Pyridoxal-phosphate dependent enzyme PI860_07450 PF00585 C-terminal regulatory domain of Threonine dehydratase PI860_07455 PF00920 Dehydratase family PI860_07460 PF01063 Amino-transferase class IV PI860_07470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PI860_07470 PF00205 Thiamine pyrophosphate enzyme, central domain PI860_07470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PI860_07480 PF01553 Acyltransferase PI860_07485 PF04463 Protein of unknown function (DUF523) PI860_07495 PF00857 Isochorismatase family PI860_07500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PI860_07500 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PI860_07510 PF00005 ABC transporter PI860_07515 PF00528 Binding-protein-dependent transport system inner membrane component PI860_07520 PF01323 DSBA-like thioredoxin domain PI860_07525 PF01636 Phosphotransferase enzyme family PI860_07530 PF13746 4Fe-4S dicluster domain PI860_07530 PF12801 4Fe-4S binding domain PI860_07530 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PI860_07535 PF06288 Protein of unknown function (DUF1040) PI860_07540 PF00360 Phytochrome region PI860_07540 PF00990 Diguanylate cyclase, GGDEF domain PI860_07540 PF00563 EAL domain PI860_07540 PF01590 GAF domain PI860_07545 PF13411 MerR HTH family regulatory protein PI860_07550 PF00403 Heavy-metal-associated domain PI860_07555 PF00156 Phosphoribosyl transferase domain PI860_07560 PF03725 3' exoribonuclease family, domain 2 PI860_07560 PF01138 3' exoribonuclease family, domain 1 PI860_07565 PF03755 YicC-like family, N-terminal region PI860_07565 PF08340 Domain of unknown function (DUF1732) PI860_07580 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) PI860_07595 PF13439 Glycosyltransferase Family 4 PI860_07595 PF00534 Glycosyl transferases group 1 PI860_07600 PF01370 NAD dependent epimerase/dehydratase family PI860_07605 PF08360 QacR-like protein, C-terminal region PI860_07605 PF00440 Bacterial regulatory proteins, tetR family PI860_07610 PF00155 Aminotransferase class I and II PI860_07615 PF08240 Alcohol dehydrogenase GroES-like domain PI860_07615 PF00107 Zinc-binding dehydrogenase PI860_07630 PF13361 UvrD-like helicase C-terminal domain PI860_07630 PF00580 UvrD/REP helicase N-terminal domain PI860_07635 PF00266 Aminotransferase class-V PI860_07640 PF02657 Fe-S metabolism associated domain PI860_07645 PF00899 ThiF family PI860_07675 PF12724 Flavodoxin domain PI860_07680 PF02386 Cation transport protein PI860_07685 PF09186 Domain of unknown function (DUF1949) PI860_07685 PF01205 Uncharacterized protein family UPF0029 PI860_07690 PF00557 Metallopeptidase family M24 PI860_07695 PF13193 AMP-binding enzyme C-terminal domain PI860_07695 PF00501 AMP-binding enzyme PI860_07700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PI860_07700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PI860_07700 PF00378 Enoyl-CoA hydratase/isomerase PI860_07705 PF02803 Thiolase, C-terminal domain PI860_07705 PF00108 Thiolase, N-terminal domain PI860_07710 PF00486 Transcriptional regulatory protein, C terminal PI860_07710 PF00072 Response regulator receiver domain PI860_07715 PF00512 His Kinase A (phospho-acceptor) domain PI860_07715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_07715 PF00672 HAMP domain PI860_07725 PF01547 Bacterial extracellular solute-binding protein PI860_07735 PF01206 Sulfurtransferase TusA PI860_07740 PF01042 Endoribonuclease L-PSP PI860_07745 PF13488 Glycine zipper PI860_07745 PF00691 OmpA family PI860_07750 PF03352 Methyladenine glycosylase PI860_07755 PF02091 Glycyl-tRNA synthetase alpha subunit PI860_07760 PF05746 DALR anticodon binding domain PI860_07760 PF02092 Glycyl-tRNA synthetase beta subunit PI860_07765 PF11008 Protein of unknown function (DUF2846) PI860_07770 PF01202 Shikimate kinase PI860_07780 PF13426 PAS domain PI860_07780 PF00990 Diguanylate cyclase, GGDEF domain PI860_07780 PF00563 EAL domain PI860_07785 PF03496 ADP-ribosyltransferase exoenzyme PI860_07785 PF03545 Yersinia virulence determinant (YopE) PI860_07790 PF05932 Tir chaperone protein (CesT) family PI860_07795 PF03222 Tryptophan/tyrosine permease family PI860_07800 PF12801 4Fe-4S binding domain PI860_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_07810 PF18113 Rubredoxin binding C-terminal domain PI860_07815 PF00258 Flavodoxin PI860_07815 PF00753 Metallo-beta-lactamase superfamily PI860_07815 PF00301 Rubredoxin PI860_07820 PF01590 GAF domain PI860_07820 PF00158 Sigma-54 interaction domain PI860_07825 PF00392 Bacterial regulatory proteins, gntR family PI860_07825 PF07702 UTRA domain PI860_07830 PF02378 Phosphotransferase system, EIIC PI860_07830 PF00367 phosphotransferase system, EIIB PI860_07835 PF02056 Family 4 glycosyl hydrolase PI860_07835 PF11975 Family 4 glycosyl hydrolase C-terminal domain PI860_07840 PF00356 Bacterial regulatory proteins, lacI family PI860_07845 PF13458 Periplasmic binding protein PI860_07850 PF02653 Branched-chain amino acid transport system / permease component PI860_07855 PF02653 Branched-chain amino acid transport system / permease component PI860_07855 PF11862 Domain of unknown function (DUF3382) PI860_07860 PF00005 ABC transporter PI860_07860 PF12399 Branched-chain amino acid ATP-binding cassette transporter PI860_07865 PF00005 ABC transporter PI860_07875 PF01810 LysE type translocator PI860_07880 PF00581 Rhodanese-like domain PI860_07885 PF01694 Rhomboid family PI860_07885 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease PI860_07890 PF12262 Bacterial virulence factor lipase N-terminal PI860_07895 PF04380 Membrane fusogenic activity PI860_07900 PF00175 Oxidoreductase NAD-binding domain PI860_07905 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PI860_07915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI860_07915 PF07498 Rho termination factor, N-terminal domain PI860_07915 PF07497 Rho termination factor, RNA-binding domain PI860_07920 PF00085 Thioredoxin PI860_07925 PF00271 Helicase conserved C-terminal domain PI860_07925 PF00270 DEAD/DEAH box helicase PI860_07930 PF02541 Ppx/GppA phosphatase family PI860_07940 PF04445 Putative SAM-dependent methyltransferase PI860_07945 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_07950 PF00563 EAL domain PI860_07950 PF00990 Diguanylate cyclase, GGDEF domain PI860_07950 PF03707 Bacterial signalling protein N terminal repeat PI860_07955 PF01432 Peptidase family M3 PI860_07960 PF00490 Delta-aminolevulinic acid dehydratase PI860_07965 PF01026 TatD related DNase PI860_07970 PF00902 Sec-independent protein translocase protein (TatC) PI860_07975 PF02416 mttA/Hcf106 family PI860_07980 PF02416 mttA/Hcf106 family PI860_07985 PF03109 ABC1 family PI860_07990 PF02036 SCP-2 sterol transfer family PI860_07995 PF01209 ubiE/COQ5 methyltransferase family PI860_08000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PI860_08045 PF03544 Gram-negative bacterial TonB protein C-terminal PI860_08050 PF02472 Biopolymer transport protein ExbD/TolR PI860_08055 PF01618 MotA/TolQ/ExbB proton channel family PI860_08060 PF01618 MotA/TolQ/ExbB proton channel family PI860_08070 PF00196 Bacterial regulatory proteins, luxR family PI860_08070 PF03472 Autoinducer binding domain PI860_08085 PF02384 N-6 DNA Methylase PI860_08090 PF13358 DDE superfamily endonuclease PI860_08090 PF13592 Winged helix-turn helix PI860_08095 PF01420 Type I restriction modification DNA specificity domain PI860_08100 PF01695 IstB-like ATP binding protein PI860_08105 PF00665 Integrase core domain PI860_08110 PF01420 Type I restriction modification DNA specificity domain PI860_08130 PF15978 Tn7-like transposition protein D PI860_08130 PF06527 TniQ PI860_08140 PF15978 Tn7-like transposition protein D PI860_08140 PF06527 TniQ PI860_08145 PF13401 AAA domain PI860_08145 PF11426 Tn7 transposition regulator TnsC PI860_08150 PF13401 AAA domain PI860_08150 PF11426 Tn7 transposition regulator TnsC PI860_08155 PF00665 Integrase core domain PI860_08160 PF08721 TnsA endonuclease C terminal PI860_08160 PF08722 TnsA endonuclease N terminal PI860_08165 PF01380 SIS domain PI860_08170 PF00455 DeoR C terminal sensor domain PI860_08170 PF08220 DeoR-like helix-turn-helix domain PI860_08175 PF00072 Response regulator receiver domain PI860_08175 PF00486 Transcriptional regulatory protein, C terminal PI860_08180 PF00672 HAMP domain PI860_08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_08180 PF00512 His Kinase A (phospho-acceptor) domain PI860_08190 PF06123 Inner membrane protein CreD PI860_08195 PF00132 Bacterial transferase hexapeptide (six repeats) PI860_08195 PF12804 MobA-like NTP transferase domain PI860_08195 PF14602 Hexapeptide repeat of succinyl-transferase PI860_08200 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PI860_08200 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PI860_08205 PF02874 ATP synthase alpha/beta family, beta-barrel domain PI860_08205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI860_08210 PF00231 ATP synthase PI860_08215 PF00306 ATP synthase alpha/beta chain, C terminal domain PI860_08215 PF02874 ATP synthase alpha/beta family, beta-barrel domain PI860_08215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI860_08220 PF00213 ATP synthase delta (OSCP) subunit PI860_08225 PF00430 ATP synthase B/B' CF(0) PI860_08230 PF00137 ATP synthase subunit C PI860_08235 PF00119 ATP synthase A chain PI860_08240 PF03899 ATP synthase I chain PI860_08245 PF17762 HTH domain found in ParB protein PI860_08245 PF02195 ParB-like nuclease domain PI860_08250 PF13614 AAA domain PI860_08255 PF02527 rRNA small subunit methyltransferase G PI860_08260 PF13932 GidA associated domain PI860_08260 PF01134 Glucose inhibited division protein A PI860_08265 PF00258 Flavodoxin PI860_08270 PF07715 TonB-dependent Receptor Plug Domain PI860_08270 PF00593 TonB dependent receptor PI860_08275 PF00005 ABC transporter PI860_08280 PF00005 ABC transporter PI860_08285 PF01497 Periplasmic binding protein PI860_08290 PF01032 FecCD transport family PI860_08295 PF07715 TonB-dependent Receptor Plug Domain PI860_08295 PF00593 TonB dependent receptor PI860_08300 PF01497 Periplasmic binding protein PI860_08305 PF00005 ABC transporter PI860_08310 PF01032 FecCD transport family PI860_08315 PF01032 FecCD transport family PI860_08320 PF00005 ABC transporter PI860_08325 PF00664 ABC transporter transmembrane region PI860_08325 PF00005 ABC transporter PI860_08325 PF08021 Siderophore-interacting FAD-binding domain PI860_08325 PF04954 Siderophore-interacting protein PI860_08335 PF00550 Phosphopantetheine attachment site PI860_08335 PF00975 Thioesterase domain PI860_08335 PF00668 Condensation domain PI860_08335 PF13193 AMP-binding enzyme C-terminal domain PI860_08335 PF00501 AMP-binding enzyme PI860_08340 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PI860_08345 PF00501 AMP-binding enzyme PI860_08345 PF13193 AMP-binding enzyme C-terminal domain PI860_08345 PF00668 Condensation domain PI860_08345 PF00550 Phosphopantetheine attachment site PI860_08350 PF00501 AMP-binding enzyme PI860_08350 PF00668 Condensation domain PI860_08350 PF00550 Phosphopantetheine attachment site PI860_08360 PF00282 Pyridoxal-dependent decarboxylase conserved domain PI860_08365 PF01926 50S ribosome-binding GTPase PI860_08365 PF12631 MnmE helical domain PI860_08365 PF10396 GTP-binding protein TrmE N-terminus PI860_08370 PF14849 YidC periplasmic domain PI860_08370 PF02096 60Kd inner membrane protein PI860_08375 PF01809 Putative membrane protein insertion efficiency factor PI860_08380 PF00825 Ribonuclease P PI860_08385 PF00468 Ribosomal protein L34 PI860_08390 PF00005 ABC transporter PI860_08395 PF00528 Binding-protein-dependent transport system inner membrane component PI860_08400 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_08405 PF00308 Bacterial dnaA protein PI860_08405 PF08299 Bacterial dnaA protein helix-turn-helix PI860_08405 PF11638 DnaA N-terminal domain PI860_08410 PF00712 DNA polymerase III beta subunit, N-terminal domain PI860_08410 PF02767 DNA polymerase III beta subunit, central domain PI860_08410 PF02768 DNA polymerase III beta subunit, C-terminal domain PI860_08415 PF02463 RecF/RecN/SMC N terminal domain PI860_08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_08420 PF00204 DNA gyrase B PI860_08420 PF00986 DNA gyrase B subunit, carboxyl terminus PI860_08420 PF18053 DNA gyrase B subunit insert domain PI860_08420 PF01751 Toprim domain PI860_08435 PF13280 WYL domain PI860_08435 PF08279 HTH domain PI860_08440 PF00011 Hsp20/alpha crystallin family PI860_08445 PF00011 Hsp20/alpha crystallin family PI860_08470 PF00155 Aminotransferase class I and II PI860_08495 PF00072 Response regulator receiver domain PI860_08495 PF00486 Transcriptional regulatory protein, C terminal PI860_08500 PF13493 Domain of unknown function (DUF4118) PI860_08500 PF13492 GAF domain PI860_08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_08500 PF00512 His Kinase A (phospho-acceptor) domain PI860_08500 PF02702 Osmosensitive K+ channel His kinase sensor domain PI860_08505 PF02669 K+-transporting ATPase, c chain PI860_08515 PF03814 Potassium-transporting ATPase A subunit PI860_08520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PI860_08520 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_08525 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_08525 PF00512 His Kinase A (phospho-acceptor) domain PI860_08530 PF00873 AcrB/AcrD/AcrF family PI860_08535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_08540 PF00440 Bacterial regulatory proteins, tetR family PI860_08575 PF12146 Serine aminopeptidase, S33 PI860_08580 PF00588 SpoU rRNA Methylase family PI860_08580 PF12105 SpoU, rRNA methylase, C-terminal PI860_08585 PF13291 ACT domain PI860_08585 PF02824 TGS domain PI860_08585 PF04607 Region found in RelA / SpoT proteins PI860_08590 PF01192 RNA polymerase Rpb6 PI860_08595 PF00625 Guanylate kinase PI860_08600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PI860_08615 PF00892 EamA-like transporter family PI860_08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_08635 PF03466 LysR substrate binding domain PI860_08640 PF00579 tRNA synthetases class I (W and Y) PI860_08645 PF00582 Universal stress protein family PI860_08650 PF07055 Enoyl reductase FAD binding domain PI860_08650 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PI860_08650 PF12241 Trans-2-enoyl-CoA reductase catalytic region PI860_08655 PF00990 Diguanylate cyclase, GGDEF domain PI860_08655 PF08448 PAS fold PI860_08665 PF00210 Ferritin-like domain PI860_08675 PF01810 LysE type translocator PI860_08705 PF16967 E-set like domain PI860_08705 PF15976 CS1-pili formation C-terminal PI860_08725 PF00665 Integrase core domain PI860_08730 PF01695 IstB-like ATP binding protein PI860_08735 PF18649 EcpB C-terminal domain PI860_08740 PF16449 Fimbrillin MatB PI860_08745 PF00072 Response regulator receiver domain PI860_08745 PF00196 Bacterial regulatory proteins, luxR family PI860_08750 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_08750 PF00989 PAS fold PI860_08750 PF00072 Response regulator receiver domain PI860_08750 PF01627 Hpt domain PI860_08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_08750 PF00512 His Kinase A (phospho-acceptor) domain PI860_08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_08760 PF00512 His Kinase A (phospho-acceptor) domain PI860_08760 PF01627 Hpt domain PI860_08760 PF00989 PAS fold PI860_08760 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_08760 PF00072 Response regulator receiver domain PI860_08770 PF06580 Histidine kinase PI860_08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_08770 PF07694 5TMR of 5TMR-LYT PI860_08775 PF00072 Response regulator receiver domain PI860_08775 PF04397 LytTr DNA-binding domain PI860_08780 PF07690 Major Facilitator Superfamily PI860_08785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PI860_08785 PF02222 ATP-grasp domain PI860_08790 PF00731 AIR carboxylase PI860_08805 PF03466 LysR substrate binding domain PI860_08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_08810 PF00593 TonB dependent receptor PI860_08810 PF07715 TonB-dependent Receptor Plug Domain PI860_08815 PF01177 Asp/Glu/Hydantoin racemase PI860_08845 PF00583 Acetyltransferase (GNAT) family PI860_08845 PF13380 CoA binding domain PI860_08845 PF13607 Succinyl-CoA ligase like flavodoxin domain PI860_08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_08860 PF03466 LysR substrate binding domain PI860_08865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PI860_08865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PI860_08870 PF00342 Phosphoglucose isomerase PI860_08880 PF05552 Conserved TM helix PI860_08880 PF00924 Mechanosensitive ion channel PI860_08885 PF00440 Bacterial regulatory proteins, tetR family PI860_08890 PF00692 dUTPase PI860_08895 PF02441 Flavoprotein PI860_08895 PF04127 DNA / pantothenate metabolism flavoprotein PI860_08900 PF04002 RadC-like JAB domain PI860_08905 PF00830 Ribosomal L28 family PI860_08910 PF00471 Ribosomal protein L33 PI860_08920 PF06827 Zinc finger found in FPG and IleRS PI860_08920 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PI860_08920 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PI860_08925 PF04393 Protein of unknown function (DUF535) PI860_08930 PF01467 Cytidylyltransferase-like PI860_08935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PI860_08940 PF00535 Glycosyl transferase family 2 PI860_08945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PI860_08950 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PI860_08955 PF03611 PTS system sugar-specific permease component PI860_08965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI860_08970 PF00356 Bacterial regulatory proteins, lacI family PI860_08970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI860_08995 PF03748 Flagellar basal body-associated protein FliL PI860_09000 PF04345 Chorismate lyase PI860_09005 PF01040 UbiA prenyltransferase family PI860_09010 PF01553 Acyltransferase PI860_09015 PF01726 LexA DNA binding domain PI860_09015 PF00717 Peptidase S24-like PI860_09025 PF02630 SCO1/SenC PI860_09035 PF00588 SpoU rRNA Methylase family PI860_09040 PF00512 His Kinase A (phospho-acceptor) domain PI860_09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_09040 PF00672 HAMP domain PI860_09040 PF16527 Two-component sensor protein CpxA, periplasmic domain PI860_09045 PF00072 Response regulator receiver domain PI860_09045 PF00486 Transcriptional regulatory protein, C terminal PI860_09050 PF01545 Cation efflux family PI860_09050 PF16916 Dimerisation domain of Zinc Transporter PI860_09055 PF00132 Bacterial transferase hexapeptide (six repeats) PI860_09055 PF06426 Serine acetyltransferase, N-terminal PI860_09065 PF06005 Cell division protein ZapB PI860_09075 PF01367 5'-3' exonuclease, C-terminal SAM fold PI860_09075 PF01612 3'-5' exonuclease PI860_09075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PI860_09075 PF00476 DNA polymerase family A PI860_09080 PF00132 Bacterial transferase hexapeptide (six repeats) PI860_09130 PF13593 SBF-like CPA transporter family (DUF4137) PI860_09135 PF12867 DinB superfamily PI860_09135 PF03781 Sulfatase-modifying factor enzyme 1 PI860_09145 PF00756 Putative esterase PI860_09150 PF08240 Alcohol dehydrogenase GroES-like domain PI860_09150 PF00107 Zinc-binding dehydrogenase PI860_09155 PF03466 LysR substrate binding domain PI860_09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_09160 PF02653 Branched-chain amino acid transport system / permease component PI860_09165 PF02653 Branched-chain amino acid transport system / permease component PI860_09170 PF00005 ABC transporter PI860_09180 PF02608 ABC transporter substrate-binding protein PnrA-like PI860_09185 PF13361 UvrD-like helicase C-terminal domain PI860_09185 PF00580 UvrD/REP helicase N-terminal domain PI860_09225 PF04972 BON domain PI860_09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_09245 PF03466 LysR substrate binding domain PI860_09250 PF01810 LysE type translocator PI860_09255 PF04143 Sulphur transport PI860_09260 PF00689 Cation transporting ATPase, C-terminus PI860_09260 PF00690 Cation transporter/ATPase, N-terminus PI860_09265 PF01810 LysE type translocator PI860_09270 PF12833 Helix-turn-helix domain PI860_09275 PF00892 EamA-like transporter family PI860_09285 PF00171 Aldehyde dehydrogenase family PI860_09290 PF01381 Helix-turn-helix PI860_09295 PF00202 Aminotransferase class-III PI860_09300 PF00171 Aldehyde dehydrogenase family PI860_09305 PF00958 GMP synthase C terminal domain PI860_09305 PF00117 Glutamine amidotransferase class-I PI860_09305 PF02540 NAD synthase PI860_09310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PI860_09310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PI860_09315 PF00294 pfkB family carbohydrate kinase PI860_09320 PF02082 Transcriptional regulator PI860_09335 PF02646 RmuC family PI860_09340 PF02386 Cation transport protein PI860_09345 PF02080 TrkA-C domain PI860_09345 PF02254 TrkA-N domain PI860_09350 PF01189 16S rRNA methyltransferase RsmB/F PI860_09350 PF01029 NusB family PI860_09355 PF02911 Formyl transferase, C-terminal domain PI860_09355 PF00551 Formyl transferase PI860_09360 PF01327 Polypeptide deformylase PI860_09365 PF01476 LysM domain PI860_09370 PF02481 DNA recombination-mediator protein A PI860_09370 PF17782 DprA winged helix domain PI860_09375 PF04361 Protein of unknown function (DUF494) PI860_09380 PF01396 Topoisomerase DNA binding C4 zinc finger PI860_09385 PF00731 AIR carboxylase PI860_09390 PF01300 Telomere recombination PI860_09395 PF01218 Coproporphyrinogen III oxidase PI860_09400 PF01488 Shikimate / quinate 5-dehydrogenase PI860_09400 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PI860_09400 PF08501 Shikimate dehydrogenase substrate binding domain PI860_09405 PF07369 Protein of unknown function (DUF1488) PI860_09410 PF01926 50S ribosome-binding GTPase PI860_09415 PF00034 Cytochrome c PI860_09420 PF04220 Der GTPase activator (YihI) PI860_09425 PF10675 Protein of unknown function (DUF2489) PI860_09430 PF06969 HemN C-terminal domain PI860_09430 PF04055 Radical SAM superfamily PI860_09435 PF00962 Adenosine/AMP deaminase PI860_09440 PF02954 Bacterial regulatory protein, Fis family PI860_09440 PF00158 Sigma-54 interaction domain PI860_09440 PF00072 Response regulator receiver domain PI860_09445 PF00512 His Kinase A (phospho-acceptor) domain PI860_09445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_09445 PF00989 PAS fold PI860_09455 PF00120 Glutamine synthetase, catalytic domain PI860_09455 PF03951 Glutamine synthetase, beta-Grasp domain PI860_09460 PF03144 Elongation factor Tu domain 2 PI860_09460 PF00009 Elongation factor Tu GTP binding domain PI860_09460 PF00679 Elongation factor G C-terminus PI860_09465 PF03631 Virulence factor BrkB PI860_09480 PF00583 Acetyltransferase (GNAT) family PI860_09480 PF09500 Putative thioesterase (yiiD_Cterm) PI860_09490 PF00270 DEAD/DEAH box helicase PI860_09490 PF00271 Helicase conserved C-terminal domain PI860_09490 PF17191 RecG wedge domain PI860_09495 PF13091 PLD-like domain PI860_09500 PF02447 GntP family permease PI860_09505 PF01202 Shikimate kinase PI860_09510 PF00920 Dehydratase family PI860_09515 PF01081 KDPG and KHG aldolase PI860_09520 PF00356 Bacterial regulatory proteins, lacI family PI860_09520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI860_09530 PF01551 Peptidase family M23 PI860_09535 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PI860_09535 PF01676 Metalloenzyme superfamily PI860_09540 PF00581 Rhodanese-like domain PI860_09545 PF02556 Preprotein translocase subunit SecB PI860_09550 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PI860_09550 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PI860_09555 PF01521 Iron-sulphur cluster biosynthesis PI860_09555 PF01106 NifU-like domain PI860_09560 PF00156 Phosphoribosyl transferase domain PI860_09565 PF00561 alpha/beta hydrolase fold PI860_09585 PF09371 Tex-like protein N-terminal domain PI860_09585 PF17674 HHH domain PI860_09585 PF00575 S1 RNA binding domain PI860_09585 PF16921 Tex protein YqgF-like domain PI860_09590 PF01272 Transcription elongation factor, GreA/GreB, C-term PI860_09590 PF03449 Transcription elongation factor, N-terminal PI860_09595 PF00072 Response regulator receiver domain PI860_09595 PF00486 Transcriptional regulatory protein, C terminal PI860_09600 PF00512 His Kinase A (phospho-acceptor) domain PI860_09600 PF00672 HAMP domain PI860_09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_09610 PF00338 Ribosomal protein S10p/S20e PI860_09615 PF00297 Ribosomal protein L3 PI860_09620 PF00573 Ribosomal protein L4/L1 family PI860_09625 PF00276 Ribosomal protein L23 PI860_09630 PF00181 Ribosomal Proteins L2, RNA binding domain PI860_09630 PF03947 Ribosomal Proteins L2, C-terminal domain PI860_09635 PF00203 Ribosomal protein S19 PI860_09640 PF00237 Ribosomal protein L22p/L17e PI860_09645 PF00189 Ribosomal protein S3, C-terminal domain PI860_09645 PF07650 KH domain PI860_09650 PF00252 Ribosomal protein L16p/L10e PI860_09655 PF00831 Ribosomal L29 protein PI860_09660 PF00366 Ribosomal protein S17 PI860_09665 PF00238 Ribosomal protein L14p/L23e PI860_09670 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PI860_09675 PF00281 Ribosomal protein L5 PI860_09675 PF00673 ribosomal L5P family C-terminus PI860_09680 PF00253 Ribosomal protein S14p/S29e PI860_09685 PF00410 Ribosomal protein S8 PI860_09690 PF00347 Ribosomal protein L6 PI860_09695 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PI860_09700 PF00333 Ribosomal protein S5, N-terminal domain PI860_09700 PF03719 Ribosomal protein S5, C-terminal domain PI860_09705 PF00327 Ribosomal protein L30p/L7e PI860_09710 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PI860_09715 PF00344 SecY translocase PI860_09720 PF00444 Ribosomal protein L36 PI860_09725 PF00416 Ribosomal protein S13/S18 PI860_09730 PF00411 Ribosomal protein S11 PI860_09735 PF01479 S4 domain PI860_09735 PF00163 Ribosomal protein S4/S9 N-terminal domain PI860_09740 PF01000 RNA polymerase Rpb3/RpoA insert domain PI860_09740 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PI860_09740 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PI860_09745 PF01196 Ribosomal protein L17 PI860_09795 PF01695 IstB-like ATP binding protein PI860_09800 PF00665 Integrase core domain PI860_09810 PF02733 Dak1 domain PI860_09815 PF02734 DAK2 domain PI860_09820 PF03610 PTS system fructose IIA component PI860_09820 PF05524 PEP-utilising enzyme, N-terminal PI860_09820 PF00391 PEP-utilising enzyme, mobile domain PI860_09820 PF00381 PTS HPr component phosphorylation site PI860_09825 PF00465 Iron-containing alcohol dehydrogenase PI860_09830 PF02954 Bacterial regulatory protein, Fis family PI860_09830 PF00989 PAS fold PI860_09830 PF00158 Sigma-54 interaction domain PI860_09835 PF01594 AI-2E family transporter PI860_09840 PF00293 NUDIX domain PI860_09865 PF00199 Catalase PI860_09865 PF06628 Catalase-related immune-responsive PI860_09890 PF00990 Diguanylate cyclase, GGDEF domain PI860_09900 PF00005 ABC transporter PI860_09900 PF08402 TOBE domain PI860_09910 PF00528 Binding-protein-dependent transport system inner membrane component PI860_09925 PF00392 Bacterial regulatory proteins, gntR family PI860_09925 PF07702 UTRA domain PI860_09945 PF02678 Pirin PI860_09945 PF17954 Quercetinase C-terminal cupin domain PI860_09950 PF07681 DoxX PI860_09955 PF17946 RecC C-terminal domain PI860_09960 PF13361 UvrD-like helicase C-terminal domain PI860_09960 PF12705 PD-(D/E)XK nuclease superfamily PI860_09960 PF00580 UvrD/REP helicase N-terminal domain PI860_09965 PF13538 UvrD-like helicase C-terminal domain PI860_09975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI860_09990 PF00909 Ammonium Transporter Family PI860_09995 PF00543 Nitrogen regulatory protein P-II PI860_10000 PF00072 Response regulator receiver domain PI860_10000 PF00990 Diguanylate cyclase, GGDEF domain PI860_10010 PF02743 Cache domain PI860_10010 PF00672 HAMP domain PI860_10010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_10030 PF00072 Response regulator receiver domain PI860_10030 PF00486 Transcriptional regulatory protein, C terminal PI860_10035 PF00672 HAMP domain PI860_10035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_10035 PF00512 His Kinase A (phospho-acceptor) domain PI860_10040 PF00990 Diguanylate cyclase, GGDEF domain PI860_10045 PF00593 TonB dependent receptor PI860_10045 PF07715 TonB-dependent Receptor Plug Domain PI860_10050 PF00313 'Cold-shock' DNA-binding domain PI860_10055 PF08448 PAS fold PI860_10055 PF00990 Diguanylate cyclase, GGDEF domain PI860_10060 PF17760 UvrA interaction domain PI860_10060 PF17755 UvrA DNA-binding domain PI860_10060 PF00005 ABC transporter PI860_10065 PF00196 Bacterial regulatory proteins, luxR family PI860_10070 PF00436 Single-strand binding protein family PI860_10085 PF01545 Cation efflux family PI860_10085 PF16916 Dimerisation domain of Zinc Transporter PI860_10115 PF00999 Sodium/hydrogen exchanger family PI860_10115 PF02254 TrkA-N domain PI860_10120 PF02525 Flavodoxin-like fold PI860_10135 PF00326 Prolyl oligopeptidase family PI860_10135 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PI860_10155 PF07947 YhhN family PI860_10160 PF07690 Major Facilitator Superfamily PI860_10165 PF13533 Biotin-lipoyl like PI860_10180 PF00375 Sodium:dicarboxylate symporter family PI860_10185 PF10678 Protein of unknown function (DUF2492) PI860_10190 PF01914 MarC family integral membrane protein PI860_10195 PF03466 LysR substrate binding domain PI860_10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_10200 PF02416 mttA/Hcf106 family PI860_10210 PF01464 Transglycosylase SLT domain PI860_10210 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_10220 PF13091 PLD-like domain PI860_10230 PF00440 Bacterial regulatory proteins, tetR family PI860_10250 PF00448 SRP54-type protein, GTPase domain PI860_10250 PF02881 SRP54-type protein, helical bundle domain PI860_10255 PF00005 ABC transporter PI860_10260 PF18075 FtsX extracellular domain PI860_10265 PF00140 Sigma-70 factor, region 1.2 PI860_10265 PF04545 Sigma-70, region 4 PI860_10265 PF04542 Sigma-70 region 2 PI860_10270 PF00484 Carbonic anhydrase PI860_10275 PF07702 UTRA domain PI860_10275 PF00392 Bacterial regulatory proteins, gntR family PI860_10280 PF01979 Amidohydrolase family PI860_10285 PF00491 Arginase family PI860_10290 PF17391 Urocanase N-terminal domain PI860_10290 PF17392 Urocanase C-terminal domain PI860_10290 PF01175 Urocanase Rossmann-like domain PI860_10295 PF00221 Aromatic amino acid lyase PI860_10300 PF01699 Sodium/calcium exchanger protein PI860_10310 PF00990 Diguanylate cyclase, GGDEF domain PI860_10310 PF17157 Gammaproteobacterial periplasmic sensor domain PI860_10310 PF00563 EAL domain PI860_10340 PF03958 Bacterial type II/III secretion system short domain PI860_10340 PF00263 Bacterial type II and III secretion system protein PI860_10375 PF04085 rod shape-determining protein MreC PI860_10380 PF04093 rod shape-determining protein MreD PI860_10385 PF02545 Maf-like protein PI860_10390 PF10150 Ribonuclease E/G family PI860_10390 PF00575 S1 RNA binding domain PI860_10395 PF13502 AsmA-like C-terminal region PI860_10395 PF13116 Protein of unknown function PI860_10405 PF00795 Carbon-nitrogen hydrolase PI860_10410 PF01523 Putative modulator of DNA gyrase PI860_10420 PF01914 MarC family integral membrane protein PI860_10435 PF00072 Response regulator receiver domain PI860_10440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI860_10440 PF00072 Response regulator receiver domain PI860_10440 PF01627 Hpt domain PI860_10440 PF00512 His Kinase A (phospho-acceptor) domain PI860_10440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_10440 PF00672 HAMP domain PI860_10445 PF13581 Histidine kinase-like ATPase domain PI860_10450 PF01740 STAS domain PI860_10450 PF08678 Rsbr N terminal PI860_10455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_10455 PF08447 PAS fold PI860_10455 PF13426 PAS domain PI860_10460 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) PI860_10470 PF08668 HDOD domain PI860_10485 PF00999 Sodium/hydrogen exchanger family PI860_10490 PF02310 B12 binding domain PI860_10490 PF02607 B12 binding domain PI860_10490 PF02574 Homocysteine S-methyltransferase PI860_10490 PF00809 Pterin binding enzyme PI860_10490 PF02965 Vitamin B12 dependent methionine synthase, activation domain PI860_10495 PF18030 RimK PreATP-grasp domain PI860_10495 PF08443 RimK-like ATP-grasp domain PI860_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_10505 PF00486 Transcriptional regulatory protein, C terminal PI860_10505 PF00072 Response regulator receiver domain PI860_10520 PF03440 Aerolysin/Pertussis toxin (APT) domain PI860_10520 PF01117 Aerolysin toxin PI860_10525 PF13667 ThiC-associated domain PI860_10525 PF01964 Radical SAM ThiC family PI860_10530 PF02581 Thiamine monophosphate synthase PI860_10535 PF00899 ThiF family PI860_10545 PF05690 Thiazole biosynthesis protein ThiG PI860_10550 PF06968 Biotin and Thiamin Synthesis associated domain PI860_10550 PF04055 Radical SAM superfamily PI860_10570 PF00132 Bacterial transferase hexapeptide (six repeats) PI860_10575 PF13036 Peptidoglycan-synthase activator LpoB PI860_10595 PF06055 Exopolysaccharide synthesis, ExoD PI860_10605 PF08803 Putative mono-oxygenase ydhR PI860_10610 PF01638 HxlR-like helix-turn-helix PI860_10635 PF00593 TonB dependent receptor PI860_10635 PF07715 TonB-dependent Receptor Plug Domain PI860_10650 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded PI860_10665 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase PI860_10670 PF02602 Uroporphyrinogen-III synthase HemD PI860_10675 PF03900 Porphobilinogen deaminase, C-terminal domain PI860_10675 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PI860_10680 PF01295 Adenylate cyclase, class-I PI860_10680 PF12633 Adenylate cyclase NT domain PI860_10690 PF13358 DDE superfamily endonuclease PI860_10690 PF13592 Winged helix-turn helix PI860_10700 PF01491 Frataxin-like domain PI860_10710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PI860_10710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PI860_10715 PF01678 Diaminopimelate epimerase PI860_10725 PF00589 Phage integrase family PI860_10725 PF02899 Phage integrase, N-terminal SAM-like domain PI860_10730 PF13419 Haloacid dehalogenase-like hydrolase PI860_10740 PF00924 Mechanosensitive ion channel PI860_10750 PF07722 Peptidase C26 PI860_10770 PF00005 ABC transporter PI860_10780 PF02464 Competence-damaged protein PI860_10780 PF00994 Probable molybdopterin binding domain PI860_10785 PF01966 HD domain PI860_10785 PF00013 KH domain PI860_10785 PF12072 Domain of unknown function (DUF3552) PI860_10790 PF04204 Homoserine O-succinyltransferase PI860_10800 PF01037 Lrp/AsnC ligand binding domain PI860_10805 PF00884 Sulfatase PI860_10825 PF02308 MgtC family PI860_10845 PF00106 short chain dehydrogenase PI860_10850 PF03577 Peptidase family C69 PI860_10875 PF01053 Cys/Met metabolism PLP-dependent enzyme PI860_10885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_10885 PF12793 Sugar transport-related sRNA regulator N-term PI860_10890 PF00141 Peroxidase PI860_10905 PF03280 Proteobacterial lipase chaperone protein PI860_10910 PF00561 alpha/beta hydrolase fold PI860_10920 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PI860_10920 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PI860_10925 PF02698 DUF218 domain PI860_10930 PF01752 Collagenase PI860_10930 PF08453 Peptidase family M9 N-terminal PI860_10940 PF00419 Fimbrial protein PI860_10950 PF13954 PapC N-terminal domain PI860_10950 PF13953 PapC C-terminal domain PI860_10950 PF00577 Outer membrane usher protein PI860_10955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PI860_10955 PF02753 Pili assembly chaperone PapD, C-terminal domain PI860_10960 PF00419 Fimbrial protein PI860_10965 PF00419 Fimbrial protein PI860_10975 PF00072 Response regulator receiver domain PI860_10975 PF00486 Transcriptional regulatory protein, C terminal PI860_10980 PF00501 AMP-binding enzyme PI860_10985 PF13378 Enolase C-terminal domain-like PI860_10990 PF00378 Enoyl-CoA hydratase/isomerase PI860_10995 PF12697 Alpha/beta hydrolase family PI860_11000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PI860_11000 PF16582 Middle domain of thiamine pyrophosphate PI860_11000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PI860_11005 PF00425 chorismate binding enzyme PI860_11010 PF01040 UbiA prenyltransferase family PI860_11040 PF03880 DbpA RNA binding domain PI860_11040 PF00270 DEAD/DEAH box helicase PI860_11040 PF00271 Helicase conserved C-terminal domain PI860_11045 PF07670 Nucleoside recognition PI860_11045 PF07662 Na+ dependent nucleoside transporter C-terminus PI860_11045 PF01773 Na+ dependent nucleoside transporter N-terminus PI860_11050 PF04307 LexA-binding, inner membrane-associated putative hydrolase PI860_11065 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PI860_11070 PF01544 CorA-like Mg2+ transporter protein PI860_11085 PF01556 DnaJ C terminal domain PI860_11085 PF00684 DnaJ central domain PI860_11085 PF00226 DnaJ domain PI860_11090 PF00999 Sodium/hydrogen exchanger family PI860_11090 PF03471 Transporter associated domain PI860_11090 PF02080 TrkA-C domain PI860_11095 PF05068 Mannitol repressor PI860_11100 PF01232 Mannitol dehydrogenase Rossmann domain PI860_11100 PF08125 Mannitol dehydrogenase C-terminal domain PI860_11105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI860_11105 PF02378 Phosphotransferase system, EIIC PI860_11105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI860_11120 PF17876 Cold shock domain PI860_11120 PF08206 Ribonuclease B OB domain PI860_11120 PF00773 RNB domain PI860_11125 PF03466 LysR substrate binding domain PI860_11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_11130 PF00765 Autoinducer synthase PI860_11135 PF00196 Bacterial regulatory proteins, luxR family PI860_11135 PF03472 Autoinducer binding domain PI860_11140 PF01810 LysE type translocator PI860_11145 PF02872 5'-nucleotidase, C-terminal domain PI860_11145 PF00149 Calcineurin-like phosphoesterase PI860_11150 PF05433 Glycine zipper 2TM domain PI860_11155 PF00583 Acetyltransferase (GNAT) family PI860_11160 PF11756 Nitrous oxide-stimulated promoter PI860_11165 PF01321 Creatinase/Prolidase N-terminal domain PI860_11165 PF00557 Metallopeptidase family M24 PI860_11170 PF00392 Bacterial regulatory proteins, gntR family PI860_11175 PF01293 Phosphoenolpyruvate carboxykinase PI860_11180 PF01430 Hsp33 protein PI860_11185 PF01479 S4 domain PI860_11190 PF11356 Type II secretion system protein C PI860_11195 PF03958 Bacterial type II/III secretion system short domain PI860_11195 PF00263 Bacterial type II and III secretion system protein PI860_11200 PF00437 Type II/IV secretion system protein PI860_11205 PF00482 Type II secretion system (T2SS), protein F PI860_11210 PF07963 Prokaryotic N-terminal methylation motif PI860_11210 PF08334 Type II secretion system (T2SS), protein G PI860_11215 PF12019 Type II transport protein GspH PI860_11215 PF07963 Prokaryotic N-terminal methylation motif PI860_11220 PF07963 Prokaryotic N-terminal methylation motif PI860_11220 PF02501 Type II secretion system (T2SS), protein I PI860_11225 PF07963 Prokaryotic N-terminal methylation motif PI860_11225 PF11612 Type II secretion system (T2SS), protein J PI860_11230 PF03934 Type II secretion system (T2SS), protein K PI860_11235 PF12693 GspL periplasmic domain PI860_11235 PF05134 Type II secretion system (T2SS), protein L PI860_11240 PF04612 Type II secretion system (T2SS), protein M PI860_11245 PF01203 Type II secretion system (T2SS), protein N PI860_11250 PF00196 Bacterial regulatory proteins, luxR family PI860_11255 PF00579 tRNA synthetases class I (W and Y) PI860_11255 PF01479 S4 domain PI860_11260 PF13419 Haloacid dehalogenase-like hydrolase PI860_11265 PF00293 NUDIX domain PI860_11270 PF00459 Inositol monophosphatase family PI860_11275 PF03222 Tryptophan/tyrosine permease family PI860_11280 PF01588 Putative tRNA binding domain PI860_11285 PF02311 AraC-like ligand binding domain PI860_11285 PF12833 Helix-turn-helix domain PI860_11290 PF01340 Met Apo-repressor, MetJ PI860_11295 PF01053 Cys/Met metabolism PLP-dependent enzyme PI860_11300 PF00696 Amino acid kinase family PI860_11300 PF00742 Homoserine dehydrogenase PI860_11300 PF03447 Homoserine dehydrogenase, NAD binding domain PI860_11315 PF04172 LrgB-like family PI860_11320 PF03788 LrgA family PI860_11335 PF00155 Aminotransferase class I and II PI860_11335 PF00392 Bacterial regulatory proteins, gntR family PI860_11355 PF04073 Aminoacyl-tRNA editing domain PI860_11360 PF02464 Competence-damaged protein PI860_11365 PF00154 recA bacterial DNA recombination protein PI860_11370 PF02631 RecX family PI860_11375 PF02272 DHHA1 domain PI860_11375 PF01411 tRNA synthetases class II (A) PI860_11375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PI860_11380 PF13840 ACT domain PI860_11380 PF01842 ACT domain PI860_11380 PF00696 Amino acid kinase family PI860_11385 PF02599 Global regulator protein family PI860_11410 PF00768 D-alanyl-D-alanine carboxypeptidase PI860_11415 PF09335 SNARE associated Golgi protein PI860_11420 PF00571 CBS domain PI860_11420 PF03471 Transporter associated domain PI860_11420 PF01595 Cyclin M transmembrane N-terminal domain PI860_11425 PF08264 Anticodon-binding domain of tRNA PI860_11425 PF10458 Valyl tRNA synthetase tRNA binding arm PI860_11425 PF00133 tRNA synthetases class I (I, L, M and V) PI860_11430 PF04364 DNA polymerase III chi subunit, HolC PI860_11435 PF02789 Cytosol aminopeptidase family, N-terminal domain PI860_11435 PF00883 Cytosol aminopeptidase family, catalytic domain PI860_11440 PF03739 Lipopolysaccharide export system permease LptF/LptG PI860_11445 PF03739 Lipopolysaccharide export system permease LptF/LptG PI860_11665 PF06892 Phage regulatory protein CII (CP76) PI860_11675 PF01381 Helix-turn-helix PI860_11675 PF00717 Peptidase S24-like PI860_11680 PF02899 Phage integrase, N-terminal SAM-like domain PI860_11680 PF00589 Phage integrase family PI860_11685 PF13356 Arm DNA-binding domain PI860_11685 PF00589 Phage integrase family PI860_11690 PF13358 DDE superfamily endonuclease PI860_11690 PF13592 Winged helix-turn helix PI860_11705 PF08346 AntA/AntB antirepressor PI860_11705 PF10548 P22AR C-terminal domain PI860_11725 PF18818 Metallopeptidase superfamily domain PI860_11725 PF13362 Toprim domain PI860_11725 PF08401 Domain of unknown function (DUF1738) PI860_11750 PF02661 Fic/DOC family PI860_11750 PF13784 Fic/DOC family N-terminal PI860_11755 PF00909 Ammonium Transporter Family PI860_11760 PF01938 TRAM domain PI860_11760 PF05958 tRNA (Uracil-5-)-methyltransferase PI860_11765 PF00583 Acetyltransferase (GNAT) family PI860_11775 PF07963 Prokaryotic N-terminal methylation motif PI860_11780 PF01026 TatD related DNase PI860_11785 PF01773 Na+ dependent nucleoside transporter N-terminus PI860_11785 PF07670 Nucleoside recognition PI860_11785 PF07662 Na+ dependent nucleoside transporter C-terminus PI860_11795 PF01791 DeoC/LacD family aldolase PI860_11800 PF02885 Glycosyl transferase family, helical bundle domain PI860_11800 PF00591 Glycosyl transferase family, a/b domain PI860_11800 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PI860_11805 PF01676 Metalloenzyme superfamily PI860_11810 PF01048 Phosphorylase superfamily PI860_11820 PF18429 Domain of unknown function (DUF5609) PI860_11835 PF18073 Rubredoxin metal binding domain PI860_11840 PF07238 PilZ domain PI860_11845 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PI860_11850 PF00216 Bacterial DNA-binding protein PI860_11865 PF01207 Dihydrouridine synthase (Dus) PI860_11870 PF01475 Ferric uptake regulator family PI860_11885 PF05525 Branched-chain amino acid transport protein PI860_11890 PF05175 Methyltransferase small domain PI860_11895 PF00270 DEAD/DEAH box helicase PI860_11895 PF00271 Helicase conserved C-terminal domain PI860_11900 PF03883 Peroxide stress protein YaaA PI860_11905 PF00437 Type II/IV secretion system protein PI860_11910 PF00437 Type II/IV secretion system protein PI860_11915 PF01168 Alanine racemase, N-terminal domain PI860_11920 PF14748 Pyrroline-5-carboxylate reductase dimerisation PI860_11920 PF03807 NADP oxidoreductase coenzyme F420-dependent PI860_11925 PF02325 YGGT family PI860_11930 PF02594 Uncharacterised ACR, YggU family COG1872 PI860_11945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_11955 PF00132 Bacterial transferase hexapeptide (six repeats) PI860_11960 PF10952 Protein of unknown function (DUF2753) PI860_11965 PF00378 Enoyl-CoA hydratase/isomerase PI860_11980 PF00106 short chain dehydrogenase PI860_11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_11985 PF03466 LysR substrate binding domain PI860_11990 PF04371 Porphyromonas-type peptidyl-arginine deiminase PI860_11995 PF01425 Amidase PI860_12005 PF00753 Metallo-beta-lactamase superfamily PI860_12015 PF00271 Helicase conserved C-terminal domain PI860_12015 PF00270 DEAD/DEAH box helicase PI860_12020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_12020 PF03466 LysR substrate binding domain PI860_12035 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase PI860_12055 PF00445 Ribonuclease T2 family PI860_12065 PF03060 Nitronate monooxygenase PI860_12100 PF09297 NADH pyrophosphatase zinc ribbon domain PI860_12100 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PI860_12100 PF00293 NUDIX domain PI860_12105 PF00512 His Kinase A (phospho-acceptor) domain PI860_12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_12105 PF00672 HAMP domain PI860_12105 PF16527 Two-component sensor protein CpxA, periplasmic domain PI860_12110 PF00072 Response regulator receiver domain PI860_12110 PF00486 Transcriptional regulatory protein, C terminal PI860_12115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_12120 PF00005 ABC transporter PI860_12120 PF02687 FtsX-like permease family PI860_12120 PF12704 MacB-like periplasmic core domain PI860_12125 PF00326 Prolyl oligopeptidase family PI860_12125 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PI860_12130 PF05170 AsmA family PI860_12150 PF03710 Glutamate-ammonia ligase adenylyltransferase PI860_12150 PF08335 GlnD PII-uridylyltransferase PI860_12155 PF03608 PTS system enzyme II sorbitol-specific factor PI860_12160 PF03612 Sorbitol phosphotransferase enzyme II N-terminus PI860_12160 PF07663 Sorbitol phosphotransferase enzyme II C-terminus PI860_12165 PF03829 PTS system glucitol/sorbitol-specific IIA component PI860_12170 PF00106 short chain dehydrogenase PI860_12180 PF08220 DeoR-like helix-turn-helix domain PI860_12180 PF00455 DeoR C terminal sensor domain PI860_12185 PF03710 Glutamate-ammonia ligase adenylyltransferase PI860_12185 PF08335 GlnD PII-uridylyltransferase PI860_12200 PF00293 NUDIX domain PI860_12205 PF16884 N-terminal domain of oxidoreductase PI860_12205 PF00107 Zinc-binding dehydrogenase PI860_12210 PF02566 OsmC-like protein PI860_12215 PF01047 MarR family PI860_12230 PF01037 Lrp/AsnC ligand binding domain PI860_12240 PF07690 Major Facilitator Superfamily PI860_12260 PF00209 Sodium:neurotransmitter symporter family PI860_12270 PF00209 Sodium:neurotransmitter symporter family PI860_12305 PF01810 LysE type translocator PI860_12310 PF01177 Asp/Glu/Hydantoin racemase PI860_12320 PF04074 YhcH/YjgK/YiaL PI860_12325 PF00871 Acetokinase family PI860_12330 PF00924 Mechanosensitive ion channel PI860_12335 PF17969 L,D-transpeptidase C-terminal domain PI860_12335 PF03734 L,D-transpeptidase catalytic domain PI860_12340 PF00474 Sodium:solute symporter family PI860_12350 PF13411 MerR HTH family regulatory protein PI860_12360 PF13592 Winged helix-turn helix PI860_12360 PF13358 DDE superfamily endonuclease PI860_12415 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PI860_12425 PF00005 ABC transporter PI860_12425 PF12848 ABC transporter PI860_12430 PF01380 SIS domain PI860_12430 PF00571 CBS domain PI860_12435 PF01957 NfeD-like C-terminal, partner-binding PI860_12440 PF01145 SPFH domain / Band 7 family PI860_12440 PF16200 C-terminal region of band_7 PI860_12445 PF10414 Sirohaem synthase dimerisation region PI860_12445 PF14824 Sirohaem biosynthesis protein central PI860_12445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PI860_12450 PF01507 Phosphoadenosine phosphosulfate reductase family PI860_12455 PF00009 Elongation factor Tu GTP binding domain PI860_12460 PF03600 Citrate transporter PI860_12460 PF02080 TrkA-C domain PI860_12475 PF13592 Winged helix-turn helix PI860_12475 PF13358 DDE superfamily endonuclease PI860_12480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_12480 PF08447 PAS fold PI860_12500 PF00005 ABC transporter PI860_12515 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) PI860_12530 PF00480 ROK family PI860_12535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PI860_12535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PI860_12540 PF00162 Phosphoglycerate kinase PI860_12545 PF01116 Fructose-bisphosphate aldolase class-II PI860_12550 PF01266 FAD dependent oxidoreductase PI860_12560 PF02683 Cytochrome C biogenesis protein transmembrane region PI860_12560 PF11412 Disulphide bond corrector protein DsbC PI860_12565 PF03091 CutA1 divalent ion tolerance protein PI860_12585 PF01571 Aminomethyltransferase folate-binding domain PI860_12590 PF03937 Flavinator of succinate dehydrogenase PI860_12600 PF00890 FAD binding domain PI860_12600 PF02910 Fumarate reductase flavoprotein C-term PI860_12605 PF04542 Sigma-70 region 2 PI860_12605 PF08281 Sigma-70, region 4 PI860_12610 PF03872 Anti sigma-E protein RseA, N-terminal domain PI860_12610 PF03873 Anti sigma-E protein RseA, C-terminal domain PI860_12625 PF00679 Elongation factor G C-terminus PI860_12625 PF00009 Elongation factor Tu GTP binding domain PI860_12625 PF06421 GTP-binding protein LepA C-terminus PI860_12625 PF03144 Elongation factor Tu domain 2 PI860_12630 PF10502 Signal peptidase, peptidase S26 PI860_12635 PF00035 Double-stranded RNA binding motif PI860_12635 PF14622 Ribonuclease-III-like PI860_12640 PF07650 KH domain PI860_12640 PF01926 50S ribosome-binding GTPase PI860_12645 PF02565 Recombination protein O C terminal PI860_12645 PF11967 Recombination protein O N terminal PI860_12650 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PI860_12655 PF01510 N-acetylmuramoyl-L-alanine amidase PI860_12660 PF07308 Protein of unknown function (DUF1456) PI860_12665 PF00672 HAMP domain PI860_12665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI860_12665 PF00072 Response regulator receiver domain PI860_12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_12665 PF00512 His Kinase A (phospho-acceptor) domain PI860_12665 PF01627 Hpt domain PI860_12670 PF01938 TRAM domain PI860_12670 PF05958 tRNA (Uracil-5-)-methyltransferase PI860_12675 PF02824 TGS domain PI860_12675 PF13291 ACT domain PI860_12675 PF04607 Region found in RelA / SpoT proteins PI860_12680 PF03819 MazG nucleotide pyrophosphohydrolase domain PI860_12685 PF00117 Glutamine amidotransferase class-I PI860_12685 PF06418 CTP synthase N-terminus PI860_12690 PF03952 Enolase, N-terminal domain PI860_12690 PF00113 Enolase, C-terminal TIM barrel domain PI860_12695 PF04977 Septum formation initiator PI860_12700 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PI860_12705 PF02542 YgbB family PI860_12710 PF01142 tRNA pseudouridine synthase D (TruD) PI860_12715 PF01975 Survival protein SurE PI860_12725 PF09335 SNARE associated Golgi protein PI860_12730 PF01551 Peptidase family M23 PI860_12730 PF01476 LysM domain PI860_12735 PF04545 Sigma-70, region 4 PI860_12735 PF04539 Sigma-70 region 3 PI860_12735 PF00140 Sigma-70 factor, region 1.2 PI860_12735 PF04542 Sigma-70 region 2 PI860_12740 PF00814 Glycoprotease family PI860_12745 PF01165 Ribosomal protein S21 PI860_12750 PF09424 Yqey-like protein PI860_12755 PF01807 CHC2 zinc finger PI860_12755 PF08278 DNA primase DnaG DnaB-binding PI860_12755 PF08275 DNA primase catalytic core, N-terminal domain PI860_12755 PF10410 DnaB-helicase binding domain of primase PI860_12760 PF04546 Sigma-70, non-essential region PI860_12760 PF03979 Sigma-70 factor, region 1.1 PI860_12760 PF00140 Sigma-70 factor, region 1.2 PI860_12760 PF04542 Sigma-70 region 2 PI860_12760 PF04545 Sigma-70, region 4 PI860_12760 PF04539 Sigma-70 region 3 PI860_12770 PF13358 DDE superfamily endonuclease PI860_12770 PF13592 Winged helix-turn helix PI860_12785 PF00128 Alpha amylase, catalytic domain PI860_12800 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PI860_12800 PF02843 Phosphoribosylglycinamide synthetase, C domain PI860_12800 PF02844 Phosphoribosylglycinamide synthetase, N domain PI860_12805 PF02142 MGS-like domain PI860_12805 PF01808 AICARFT/IMPCHase bienzyme PI860_12810 PF13411 MerR HTH family regulatory protein PI860_12815 PF01872 RibD C-terminal domain PI860_12820 PF03889 Alternative ribosome-rescue factor A PI860_12825 PF06969 HemN C-terminal domain PI860_12825 PF04055 Radical SAM superfamily PI860_12830 PF01725 Ham1 family PI860_12835 PF07690 Major Facilitator Superfamily PI860_12855 PF13302 Acetyltransferase (GNAT) domain PI860_12860 PF13302 Acetyltransferase (GNAT) domain PI860_12870 PF03466 LysR substrate binding domain PI860_12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_12875 PF07690 Major Facilitator Superfamily PI860_12880 PF00267 Gram-negative porin PI860_12885 PF03605 Anaerobic c4-dicarboxylate membrane transporter PI860_12890 PF10415 Fumarase C C-terminus PI860_12890 PF00206 Lyase PI860_12895 PF04186 FxsA cytoplasmic membrane protein PI860_12900 PF01554 MatE PI860_12905 PF00166 Chaperonin 10 Kd subunit PI860_12910 PF00118 TCP-1/cpn60 chaperonin family PI860_12920 PF00990 Diguanylate cyclase, GGDEF domain PI860_12920 PF00563 EAL domain PI860_12920 PF03707 Bacterial signalling protein N terminal repeat PI860_12920 PF13188 PAS domain PI860_12930 PF00849 RNA pseudouridylate synthase PI860_12935 PF00271 Helicase conserved C-terminal domain PI860_12935 PF12137 RNA polymerase recycling family C-terminal PI860_12935 PF00176 SNF2 family N-terminal domain PI860_12935 PF18337 RapA N-terminal Tudor like domain PI860_12935 PF18339 RapA N-terminal Tudor like domain 1 PI860_12965 PF08343 Ribonucleotide reductase N-terminal PI860_12965 PF02867 Ribonucleotide reductase, barrel domain PI860_12965 PF00317 Ribonucleotide reductase, all-alpha domain PI860_12975 PF02562 PhoH-like protein PI860_12975 PF13638 PIN domain PI860_12980 PF00005 ABC transporter PI860_12985 PF00528 Binding-protein-dependent transport system inner membrane component PI860_13005 PF00694 Aconitase C-terminal domain PI860_13010 PF00330 Aconitase family (aconitate hydratase) PI860_13015 PF00180 Isocitrate/isopropylmalate dehydrogenase PI860_13020 PF08502 LeuA allosteric (dimerisation) domain PI860_13020 PF00682 HMGL-like PI860_13030 PF01569 PAP2 superfamily PI860_13045 PF00205 Thiamine pyrophosphate enzyme, central domain PI860_13045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PI860_13045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PI860_13050 PF10369 Small subunit of acetolactate synthase PI860_13055 PF01515 Phosphate acetyl/butaryl transferase PI860_13055 PF07085 DRTGG domain PI860_13060 PF00871 Acetokinase family PI860_13065 PF04217 Protein of unknown function, DUF412 PI860_13070 PF03887 YfbU domain PI860_13075 PF00578 AhpC/TSA family PI860_13080 PF01842 ACT domain PI860_13085 PF00701 Dihydrodipicolinate synthetase family PI860_13090 PF06804 NlpB/DapX lipoprotein PI860_13095 PF01259 SAICAR synthetase PI860_13105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_13105 PF03466 LysR substrate binding domain PI860_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_13130 PF00512 His Kinase A (phospho-acceptor) domain PI860_13130 PF18415 Histidine kinase receptor ArcB trans-membrane domain PI860_13130 PF01627 Hpt domain PI860_13130 PF00989 PAS fold PI860_13130 PF00072 Response regulator receiver domain PI860_13135 PF01966 HD domain PI860_13145 PF00672 HAMP domain PI860_13145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI860_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_13145 PF01627 Hpt domain PI860_13145 PF00072 Response regulator receiver domain PI860_13145 PF00512 His Kinase A (phospho-acceptor) domain PI860_13160 PF12729 Four helix bundle sensory module for signal transduction PI860_13160 PF00672 HAMP domain PI860_13160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_13165 PF02357 Transcription termination factor nusG PI860_13170 PF03180 NLPA lipoprotein PI860_13175 PF00528 Binding-protein-dependent transport system inner membrane component PI860_13180 PF00005 ABC transporter PI860_13180 PF09383 NIL domain PI860_13190 PF00480 ROK family PI860_13195 PF08331 Domain of unknown function (DUF1730) PI860_13200 PF01256 Carbohydrate kinase PI860_13200 PF03853 YjeF-related protein N-terminus PI860_13205 PF01256 Carbohydrate kinase PI860_13205 PF03853 YjeF-related protein N-terminus PI860_13210 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PI860_13215 PF01520 N-acetylmuramoyl-L-alanine amidase PI860_13225 PF08676 MutL C terminal dimerisation domain PI860_13225 PF01119 DNA mismatch repair protein, C-terminal domain PI860_13235 PF17209 Hfq protein PI860_13240 PF13167 GTP-binding GTPase N-terminal PI860_13240 PF01926 50S ribosome-binding GTPase PI860_13240 PF16360 GTP-binding GTPase Middle Region PI860_13245 PF01145 SPFH domain / Band 7 family PI860_13245 PF12221 Bacterial membrane protein N terminal PI860_13250 PF01145 SPFH domain / Band 7 family PI860_13255 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) PI860_13260 PF00348 Polyprenyl synthetase PI860_13265 PF00829 Ribosomal prokaryotic L21 protein PI860_13270 PF01016 Ribosomal L27 protein PI860_13275 PF01926 50S ribosome-binding GTPase PI860_13275 PF01018 GTP1/OBG PI860_13280 PF07670 Nucleoside recognition PI860_13285 PF00501 AMP-binding enzyme PI860_13285 PF13193 AMP-binding enzyme C-terminal domain PI860_13305 PF00296 Luciferase-like monooxygenase PI860_13320 PF00149 Calcineurin-like phosphoesterase PI860_13325 PF04379 ApaG domain PI860_13330 PF00398 Ribosomal RNA adenine dimethylase PI860_13335 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PI860_13340 PF09312 SurA N-terminal domain PI860_13340 PF00639 PPIC-type PPIASE domain PI860_13345 PF04453 LPS transport system D PI860_13345 PF03968 OstA-like protein PI860_13350 PF01636 Phosphotransferase enzyme family PI860_13355 PF00483 Nucleotidyl transferase PI860_13360 PF00226 DnaJ domain PI860_13360 PF05099 Tellurite resistance protein TerB PI860_13375 PF00005 ABC transporter PI860_13375 PF12848 ABC transporter PI860_13385 PF01370 NAD dependent epimerase/dehydratase family PI860_13395 PF00005 ABC transporter PI860_13400 PF01032 FecCD transport family PI860_13410 PF06228 Haem utilisation ChuX/HutX PI860_13415 PF01243 Pyridoxamine 5'-phosphate oxidase PI860_13435 PF07715 TonB-dependent Receptor Plug Domain PI860_13435 PF00593 TonB dependent receptor PI860_13440 PF12832 MFS_1 like family PI860_13450 PF13443 Cro/C1-type HTH DNA-binding domain PI860_13470 PF17945 Beta/Gamma crystallin PI860_13470 PF12561 ToxR activated gene A lipoprotein domain PI860_13475 PF18416 N-acetylglucosamine binding protein domain 2 PI860_13475 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading PI860_13480 PF08241 Methyltransferase domain PI860_13485 PF00027 Cyclic nucleotide-binding domain PI860_13485 PF13545 Crp-like helix-turn-helix domain PI860_13490 PF02566 OsmC-like protein PI860_13505 PF00485 Phosphoribulokinase / Uridine kinase family PI860_13515 PF00892 EamA-like transporter family PI860_13520 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PI860_13525 PF01522 Polysaccharide deacetylase PI860_13535 PF00535 Glycosyl transferase family 2 PI860_13540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PI860_13545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PI860_13545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PI860_13545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PI860_13550 PF06794 Uncharacterised protein family (UPF0270) PI860_13555 PF00360 Phytochrome region PI860_13555 PF00990 Diguanylate cyclase, GGDEF domain PI860_13555 PF01590 GAF domain PI860_13555 PF00563 EAL domain PI860_13560 PF00561 alpha/beta hydrolase fold PI860_13565 PF01584 CheW-like domain PI860_13565 PF00072 Response regulator receiver domain PI860_13575 PF09526 Probable metal-binding protein (DUF2387) PI860_13580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI860_13585 PF04102 SlyX PI860_13595 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PI860_13595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI860_13600 PF00158 Sigma-54 interaction domain PI860_13600 PF00072 Response regulator receiver domain PI860_13600 PF02954 Bacterial regulatory protein, Fis family PI860_13620 PF02872 5'-nucleotidase, C-terminal domain PI860_13620 PF00149 Calcineurin-like phosphoesterase PI860_13625 PF00563 EAL domain PI860_13625 PF12792 CSS motif domain associated with EAL PI860_13640 PF03796 DnaB-like helicase C terminal domain PI860_13640 PF00772 DnaB-like helicase N terminal domain PI860_13645 PF01168 Alanine racemase, N-terminal domain PI860_13645 PF00842 Alanine racemase, C-terminal domain PI860_13650 PF12838 4Fe-4S dicluster domain PI860_13655 PF01136 Peptidase family U32 PI860_13655 PF16325 Peptidase family U32 C-terminal domain PI860_13660 PF00989 PAS fold PI860_13660 PF00990 Diguanylate cyclase, GGDEF domain PI860_13660 PF01590 GAF domain PI860_13660 PF00563 EAL domain PI860_13680 PF16967 E-set like domain PI860_13680 PF15976 CS1-pili formation C-terminal PI860_13690 PF00072 Response regulator receiver domain PI860_13690 PF00196 Bacterial regulatory proteins, luxR family PI860_13695 PF00072 Response regulator receiver domain PI860_13695 PF00196 Bacterial regulatory proteins, luxR family PI860_13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_13700 PF01627 Hpt domain PI860_13700 PF00072 Response regulator receiver domain PI860_13700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI860_13700 PF00672 HAMP domain PI860_13700 PF00512 His Kinase A (phospho-acceptor) domain PI860_13725 PF00266 Aminotransferase class-V PI860_13730 PF01339 CheB methylesterase PI860_13730 PF00072 Response regulator receiver domain PI860_13735 PF03975 CheD chemotactic sensory transduction PI860_13740 PF03705 CheR methyltransferase, all-alpha domain PI860_13740 PF01739 CheR methyltransferase, SAM binding domain PI860_13745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_13745 PF00672 HAMP domain PI860_13745 PF02203 Tar ligand binding domain homologue PI860_13750 PF01584 CheW-like domain PI860_13755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_13755 PF00672 HAMP domain PI860_13755 PF12729 Four helix bundle sensory module for signal transduction PI860_13760 PF01584 CheW-like domain PI860_13760 PF01627 Hpt domain PI860_13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_13760 PF02895 Signal transducing histidine kinase, homodimeric domain PI860_13770 PF00072 Response regulator receiver domain PI860_13780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PI860_13780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PI860_13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_13785 PF03466 LysR substrate binding domain PI860_13790 PF01810 LysE type translocator PI860_13805 PF06906 Protein of unknown function (DUF1272) PI860_13810 PF01209 ubiE/COQ5 methyltransferase family PI860_13820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PI860_13820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PI860_13825 PF00730 HhH-GPD superfamily base excision DNA repair protein PI860_13825 PF06029 AlkA N-terminal domain PI860_13825 PF02805 Metal binding domain of Ada PI860_13825 PF12833 Helix-turn-helix domain PI860_13835 PF02074 Carboxypeptidase Taq (M32) metallopeptidase PI860_13860 PF00106 short chain dehydrogenase PI860_13870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_13880 PF07995 Glucose / Sorbosone dehydrogenase PI860_13905 PF00800 Prephenate dehydratase PI860_13905 PF01817 Chorismate mutase type II PI860_13935 PF08349 Protein of unknown function (DUF1722) PI860_13940 PF13411 MerR HTH family regulatory protein PI860_13945 PF03441 FAD binding domain of DNA photolyase PI860_13945 PF00875 DNA photolyase PI860_13955 PF00106 short chain dehydrogenase PI860_13995 PF00210 Ferritin-like domain PI860_14000 PF03063 Prismane/CO dehydrogenase family PI860_14005 PF00970 Oxidoreductase FAD-binding domain PI860_14005 PF00111 2Fe-2S iron-sulfur cluster binding domain PI860_14005 PF00175 Oxidoreductase NAD-binding domain PI860_14010 PF16363 GDP-mannose 4,6 dehydratase PI860_14015 PF06965 Na+/H+ antiporter 1 PI860_14015 PF13462 Thioredoxin PI860_14025 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain PI860_14025 PF06165 Glycosyltransferase family 36 PI860_14025 PF10091 Putative glucoamylase PI860_14030 PF03466 LysR substrate binding domain PI860_14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_14035 PF03306 Alpha-acetolactate decarboxylase PI860_14045 PF01965 DJ-1/PfpI family PI860_14050 PF02558 Ketopantoate reductase PanE/ApbA PI860_14050 PF08546 Ketopantoate reductase PanE/ApbA C terminal PI860_14055 PF04461 Protein of unknown function (DUF520) PI860_14060 PF03502 Nucleoside-specific channel-forming protein, Tsx PI860_14065 PF07690 Major Facilitator Superfamily PI860_14075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PI860_14085 PF05175 Methyltransferase small domain PI860_14090 PF01722 BolA-like protein PI860_14100 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PI860_14100 PF11973 NQRA C-terminal domain PI860_14105 PF03116 NQR2, RnfD, RnfE family PI860_14110 PF04205 FMN-binding domain PI860_14115 PF02508 Rnf-Nqr subunit, membrane protein PI860_14120 PF02508 Rnf-Nqr subunit, membrane protein PI860_14125 PF00970 Oxidoreductase FAD-binding domain PI860_14125 PF00111 2Fe-2S iron-sulfur cluster binding domain PI860_14125 PF00175 Oxidoreductase NAD-binding domain PI860_14130 PF02424 ApbE family PI860_14145 PF00817 impB/mucB/samB family PI860_14145 PF11799 impB/mucB/samB family C-terminal domain PI860_14145 PF11798 IMS family HHH motif PI860_14150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_14150 PF00672 HAMP domain PI860_14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_14155 PF03466 LysR substrate binding domain PI860_14165 PF04241 Protein of unknown function (DUF423) PI860_14170 PF18125 RlmM ferredoxin-like domain PI860_14170 PF01728 FtsJ-like methyltransferase PI860_14180 PF00180 Isocitrate/isopropylmalate dehydrogenase PI860_14180 PF18324 Hypothetical protein TT1725 PI860_14185 PF01367 5'-3' exonuclease, C-terminal SAM fold PI860_14185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PI860_14190 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PI860_14190 PF11892 Domain of unknown function (DUF3412) PI860_14190 PF03641 Possible lysine decarboxylase PI860_14195 PF00990 Diguanylate cyclase, GGDEF domain PI860_14205 PF14489 QueF-like protein PI860_14205 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PI860_14210 PF07348 Syd protein (SUKH-2) PI860_14215 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) PI860_14240 PF04287 tRNA pseudouridine synthase C PI860_14245 PF00849 RNA pseudouridylate synthase PI860_14250 PF00258 Flavodoxin PI860_14255 PF02264 LamB porin PI860_14270 PF07148 Maltose operon periplasmic protein precursor (MalM) PI860_14275 PF02378 Phosphotransferase system, EIIC PI860_14275 PF00367 phosphotransferase system, EIIB PI860_14280 PF11944 Protein of unknown function (DUF3461) PI860_14285 PF14602 Hexapeptide repeat of succinyl-transferase PI860_14285 PF00132 Bacterial transferase hexapeptide (six repeats) PI860_14285 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PI860_14295 PF00557 Metallopeptidase family M24 PI860_14300 PF00318 Ribosomal protein S2 PI860_14305 PF00889 Elongation factor TS PI860_14310 PF00696 Amino acid kinase family PI860_14315 PF01765 Ribosome recycling factor PI860_14320 PF01255 Putative undecaprenyl diphosphate synthase PI860_14330 PF13288 DXP reductoisomerase C-terminal domain PI860_14330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PI860_14330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PI860_14335 PF02163 Peptidase family M50 PI860_14335 PF17820 PDZ domain PI860_14340 PF01103 Surface antigen PI860_14340 PF07244 Surface antigen variable number repeat PI860_14345 PF03938 Outer membrane protein (OmpH-like) PI860_14350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PI860_14350 PF00132 Bacterial transferase hexapeptide (six repeats) PI860_14355 PF07977 FabA-like domain PI860_14360 PF00132 Bacterial transferase hexapeptide (six repeats) PI860_14360 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PI860_14365 PF02684 Lipid-A-disaccharide synthetase PI860_14370 PF01351 Ribonuclease HII PI860_14375 PF07733 Bacterial DNA polymerase III alpha NTPase domain PI860_14375 PF14579 Helix-hairpin-helix motif PI860_14375 PF02811 PHP domain PI860_14375 PF01336 OB-fold nucleic acid binding domain PI860_14375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PI860_14380 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PI860_14385 PF00486 Transcriptional regulatory protein, C terminal PI860_14385 PF18500 CadC C-terminal domain 1 PI860_14390 PF13520 Amino acid permease PI860_14395 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain PI860_14395 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PI860_14395 PF01276 Orn/Lys/Arg decarboxylase, major domain PI860_14400 PF08543 Phosphomethylpyrimidine kinase PI860_14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_14410 PF03466 LysR substrate binding domain PI860_14420 PF13520 Amino acid permease PI860_14425 PF13302 Acetyltransferase (GNAT) domain PI860_14430 PF00005 ABC transporter PI860_14430 PF16326 ABC transporter C-terminal domain PI860_14430 PF12848 ABC transporter PI860_14440 PF01431 Peptidase family M13 PI860_14440 PF05649 Peptidase family M13 PI860_14445 PF01171 PP-loop family PI860_14445 PF09179 TilS substrate binding domain PI860_14445 PF11734 TilS substrate C-terminal domain PI860_14450 PF00990 Diguanylate cyclase, GGDEF domain PI860_14485 PF00072 Response regulator receiver domain PI860_14485 PF00196 Bacterial regulatory proteins, luxR family PI860_14495 PF00128 Alpha amylase, catalytic domain PI860_14505 PF01161 Phosphatidylethanolamine-binding protein PI860_14510 PF00709 Adenylosuccinate synthetase PI860_14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_14515 PF03466 LysR substrate binding domain PI860_14525 PF00155 Aminotransferase class I and II PI860_14530 PF07690 Major Facilitator Superfamily PI860_14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_14535 PF03466 LysR substrate binding domain PI860_14540 PF00106 short chain dehydrogenase PI860_14545 PF01343 Peptidase family S49 PI860_14545 PF08496 Peptidase family S49 N-terminal PI860_14550 PF04996 Succinylarginine dihydrolase PI860_14555 PF01751 Toprim domain PI860_14555 PF01396 Topoisomerase DNA binding C4 zinc finger PI860_14555 PF01131 DNA topoisomerase PI860_14555 PF08272 Topoisomerase I zinc-ribbon-like PI860_14570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_14570 PF08447 PAS fold PI860_14575 PF00728 Glycosyl hydrolase family 20, catalytic domain PI860_14575 PF02838 Glycosyl hydrolase family 20, domain 2 PI860_14580 PF01869 BadF/BadG/BcrA/BcrD ATPase family PI860_14590 PF00005 ABC transporter PI860_14590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI860_14595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI860_14595 PF00005 ABC transporter PI860_14600 PF12911 N-terminal TM domain of oligopeptide transport permease C PI860_14600 PF00528 Binding-protein-dependent transport system inner membrane component PI860_14605 PF00528 Binding-protein-dependent transport system inner membrane component PI860_14610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_14615 PF00512 His Kinase A (phospho-acceptor) domain PI860_14615 PF09308 LuxQ, periplasmic PI860_14615 PF00072 Response regulator receiver domain PI860_14615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_14635 PF10725 Protein of unknown function (DUF2517) PI860_14645 PF08447 PAS fold PI860_14645 PF13426 PAS domain PI860_14645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_14655 PF04632 Fusaric acid resistance protein family PI860_14660 PF00994 Probable molybdopterin binding domain PI860_14660 PF03454 MoeA C-terminal region (domain IV) PI860_14660 PF03453 MoeA N-terminal region (domain I and II) PI860_14665 PF12804 MobA-like NTP transferase domain PI860_14670 PF00005 ABC transporter PI860_14675 PF00528 Binding-protein-dependent transport system inner membrane component PI860_14680 PF12849 PBP superfamily domain PI860_14690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_14690 PF00512 His Kinase A (phospho-acceptor) domain PI860_14690 PF00989 PAS fold PI860_14700 PF02634 FdhD/NarQ family PI860_14710 PF13358 DDE superfamily endonuclease PI860_14710 PF13592 Winged helix-turn helix PI860_14735 PF12795 Mechanosensitive ion channel porin domain PI860_14735 PF12794 Mechanosensitive ion channel inner membrane domain 1 PI860_14735 PF00924 Mechanosensitive ion channel PI860_14740 PF00224 Pyruvate kinase, barrel domain PI860_14740 PF02887 Pyruvate kinase, alpha/beta domain PI860_14750 PF04389 Peptidase family M28 PI860_14750 PF04151 Bacterial pre-peptidase C-terminal domain PI860_14765 PF04381 Putative exonuclease, RdgC PI860_14775 PF00149 Calcineurin-like phosphoesterase PI860_14775 PF12320 Type 5 capsule protein repressor C-terminal domain PI860_14780 PF13476 AAA domain PI860_14790 PF01292 Prokaryotic cytochrome b561 PI860_14800 PF00990 Diguanylate cyclase, GGDEF domain PI860_14805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PI860_14810 PF02896 PEP-utilising enzyme, TIM barrel domain PI860_14810 PF00391 PEP-utilising enzyme, mobile domain PI860_14810 PF05524 PEP-utilising enzyme, N-terminal PI860_14815 PF00381 PTS HPr component phosphorylation site PI860_14820 PF00291 Pyridoxal-phosphate dependent enzyme PI860_14835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PI860_14835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PI860_14840 PF18389 TrmO C-terminal domain PI860_14840 PF01980 tRNA-methyltransferase O PI860_14860 PF00005 ABC transporter PI860_14860 PF00664 ABC transporter transmembrane region PI860_14865 PF00664 ABC transporter transmembrane region PI860_14865 PF00005 ABC transporter PI860_14880 PF00072 Response regulator receiver domain PI860_14880 PF00486 Transcriptional regulatory protein, C terminal PI860_14890 PF03737 Aldolase/RraA PI860_14905 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) PI860_14910 PF00588 SpoU rRNA Methylase family PI860_14915 PF00742 Homoserine dehydrogenase PI860_14915 PF13840 ACT domain PI860_14915 PF01842 ACT domain PI860_14915 PF03447 Homoserine dehydrogenase, NAD binding domain PI860_14915 PF00696 Amino acid kinase family PI860_14920 PF08544 GHMP kinases C terminal PI860_14920 PF00288 GHMP kinases N terminal domain PI860_14925 PF00291 Pyridoxal-phosphate dependent enzyme PI860_14925 PF14821 Threonine synthase N terminus PI860_14930 PF13592 Winged helix-turn helix PI860_14930 PF13358 DDE superfamily endonuclease PI860_14945 PF13358 DDE superfamily endonuclease PI860_14945 PF13592 Winged helix-turn helix PI860_14955 PF01797 Transposase IS200 like PI860_14975 PF01048 Phosphorylase superfamily PI860_14990 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PI860_14995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PI860_14995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI860_15000 PF02690 Na+/Pi-cotransporter PI860_15005 PF00324 Amino acid permease PI860_15010 PF00324 Amino acid permease PI860_15015 PF00202 Aminotransferase class-III PI860_15020 PF00171 Aldehyde dehydrogenase family PI860_15025 PF01381 Helix-turn-helix PI860_15025 PF07883 Cupin domain PI860_15030 PF01266 FAD dependent oxidoreductase PI860_15040 PF12833 Helix-turn-helix domain PI860_15040 PF07883 Cupin domain PI860_15065 PF00816 H-NS histone family PI860_15070 PF00872 Transposase, Mutator family PI860_15075 PF00793 DAHP synthetase I family PI860_15080 PF08021 Siderophore-interacting FAD-binding domain PI860_15080 PF04954 Siderophore-interacting protein PI860_15085 PF02321 Outer membrane efflux protein PI860_15090 PF12704 MacB-like periplasmic core domain PI860_15090 PF00005 ABC transporter PI860_15090 PF02687 FtsX-like permease family PI860_15095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_15105 PF01368 DHH family PI860_15105 PF02833 DHHA2 domain PI860_15110 PF02463 RecF/RecN/SMC N terminal domain PI860_15115 PF01513 ATP-NAD kinase PI860_15120 PF01025 GrpE PI860_15125 PF00012 Hsp70 protein PI860_15130 PF00226 DnaJ domain PI860_15130 PF01556 DnaJ C terminal domain PI860_15130 PF00684 DnaJ central domain PI860_15135 PF02264 LamB porin PI860_15135 PF11471 Maltoporin periplasmic N-terminal extension PI860_15140 PF00294 pfkB family carbohydrate kinase PI860_15145 PF00367 phosphotransferase system, EIIB PI860_15145 PF02378 Phosphotransferase system, EIIC PI860_15155 PF13407 Periplasmic binding protein domain PI860_15155 PF00356 Bacterial regulatory proteins, lacI family PI860_15160 PF02308 MgtC family PI860_15180 PF04143 Sulphur transport PI860_15195 PF00873 AcrB/AcrD/AcrF family PI860_15200 PF00563 EAL domain PI860_15200 PF03707 Bacterial signalling protein N terminal repeat PI860_15200 PF00990 Diguanylate cyclase, GGDEF domain PI860_15205 PF03099 Biotin/lipoate A/B protein ligase family PI860_15205 PF10437 Bacterial lipoate protein ligase C-terminus PI860_15215 PF00873 AcrB/AcrD/AcrF family PI860_15220 PF00529 HlyD membrane-fusion protein of T1SS PI860_15220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_15235 PF00873 AcrB/AcrD/AcrF family PI860_15240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_15245 PF03372 Endonuclease/Exonuclease/phosphatase family PI860_15260 PF02424 ApbE family PI860_15265 PF00127 Copper binding proteins, plastocyanin/azurin family PI860_15280 PF01156 Inosine-uridine preferring nucleoside hydrolase PI860_15290 PF00034 Cytochrome c PI860_15290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PI860_15300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PI860_15300 PF06481 COX Aromatic Rich Motif PI860_15305 PF00115 Cytochrome C and Quinol oxidase polypeptide I PI860_15310 PF00510 Cytochrome c oxidase subunit III PI860_15315 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PI860_15320 PF01040 UbiA prenyltransferase family PI860_15325 PF07690 Major Facilitator Superfamily PI860_15330 PF00561 alpha/beta hydrolase fold PI860_15345 PF00356 Bacterial regulatory proteins, lacI family PI860_15345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI860_15350 PF00367 phosphotransferase system, EIIB PI860_15350 PF02378 Phosphotransferase system, EIIC PI860_15355 PF00155 Aminotransferase class I and II PI860_15380 PF01238 Phosphomannose isomerase type I PI860_15385 PF12833 Helix-turn-helix domain PI860_15390 PF00180 Isocitrate/isopropylmalate dehydrogenase PI860_15400 PF00291 Pyridoxal-phosphate dependent enzyme PI860_15405 PF02447 GntP family permease PI860_15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_15410 PF03466 LysR substrate binding domain PI860_15485 PF01668 SmpB protein PI860_15490 PF03364 Polyketide cyclase / dehydrase and lipid transport PI860_15495 PF03658 RnfH family Ubiquitin PI860_15500 PF13460 NAD(P)H-binding PI860_15505 PF04355 SmpA / OmlA family PI860_15540 PF04972 BON domain PI860_15540 PF00263 Bacterial type II and III secretion system protein PI860_15540 PF13629 Pilus formation protein N terminal region PI860_15550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PI860_15555 PF00437 Type II/IV secretion system protein PI860_15590 PF00465 Iron-containing alcohol dehydrogenase PI860_15595 PF01048 Phosphorylase superfamily PI860_15600 PF00849 RNA pseudouridylate synthase PI860_15605 PF01156 Inosine-uridine preferring nucleoside hydrolase PI860_15620 PF07509 Protein of unknown function (DUF1523) PI860_15625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_15625 PF00672 HAMP domain PI860_15625 PF12729 Four helix bundle sensory module for signal transduction PI860_15630 PF01810 LysE type translocator PI860_15640 PF03471 Transporter associated domain PI860_15640 PF00999 Sodium/hydrogen exchanger family PI860_15640 PF02080 TrkA-C domain PI860_15650 PF03471 Transporter associated domain PI860_15650 PF00999 Sodium/hydrogen exchanger family PI860_15650 PF02080 TrkA-C domain PI860_15660 PF02557 D-alanyl-D-alanine carboxypeptidase PI860_15665 PF07687 Peptidase dimerisation domain PI860_15665 PF01546 Peptidase family M20/M25/M40 PI860_15670 PF03960 ArsC family PI860_15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_15675 PF03466 LysR substrate binding domain PI860_15690 PF03605 Anaerobic c4-dicarboxylate membrane transporter PI860_15695 PF01336 OB-fold nucleic acid binding domain PI860_15695 PF00152 tRNA synthetases class II (D, K and N) PI860_15710 PF00202 Aminotransferase class-III PI860_15715 PF06968 Biotin and Thiamin Synthesis associated domain PI860_15715 PF04055 Radical SAM superfamily PI860_15720 PF00155 Aminotransferase class I and II PI860_15725 PF12697 Alpha/beta hydrolase family PI860_15725 PF08241 Methyltransferase domain PI860_15735 PF01435 Peptidase family M48 PI860_15740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_15740 PF13426 PAS domain PI860_15740 PF08447 PAS fold PI860_15745 PF03476 MOSC N-terminal beta barrel domain PI860_15745 PF00111 2Fe-2S iron-sulfur cluster binding domain PI860_15745 PF00111 2Fe-2S iron-sulfur cluster binding domain PI860_15745 PF03476 MOSC N-terminal beta barrel domain PI860_15745 PF03473 MOSC domain PI860_15745 PF03473 MOSC domain PI860_15760 PF04325 Protein of unknown function (DUF465) PI860_15770 PF01554 MatE PI860_15775 PF01740 STAS domain PI860_15775 PF00916 Sulfate permease family PI860_15790 PF00291 Pyridoxal-phosphate dependent enzyme PI860_15800 PF00465 Iron-containing alcohol dehydrogenase PI860_15810 PF17932 Tetracyclin repressor-like, C-terminal domain PI860_15810 PF00440 Bacterial regulatory proteins, tetR family PI860_15815 PF00171 Aldehyde dehydrogenase family PI860_15825 PF00877 NlpC/P60 family PI860_15830 PF12563 Hemolytic toxin N terminal PI860_15830 PF07968 Leukocidin/Hemolysin toxin family PI860_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_15835 PF03466 LysR substrate binding domain PI860_15840 PF13358 DDE superfamily endonuclease PI860_15840 PF13592 Winged helix-turn helix PI860_15845 PF10417 C-terminal domain of 1-Cys peroxiredoxin PI860_15845 PF00578 AhpC/TSA family PI860_15865 PF08003 Protein of unknown function (DUF1698) PI860_15870 PF13649 Methyltransferase domain PI860_15880 PF02938 GAD domain PI860_15880 PF00152 tRNA synthetases class II (D, K and N) PI860_15880 PF01336 OB-fold nucleic acid binding domain PI860_15885 PF01709 Transcriptional regulator PI860_15890 PF00884 Sulfatase PI860_15890 PF08019 Phosphoethanolamine transferase EptA/EptB PI860_15895 PF02838 Glycosyl hydrolase family 20, domain 2 PI860_15895 PF00728 Glycosyl hydrolase family 20, catalytic domain PI860_15895 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain PI860_15895 PF03173 Putative carbohydrate binding domain PI860_15905 PF00550 Phosphopantetheine attachment site PI860_15905 PF00975 Thioesterase domain PI860_15905 PF00501 AMP-binding enzyme PI860_15905 PF13193 AMP-binding enzyme C-terminal domain PI860_15905 PF00668 Condensation domain PI860_15915 PF00665 Integrase core domain PI860_15920 PF01695 IstB-like ATP binding protein PI860_15930 PF00668 Condensation domain PI860_15930 PF16197 Ketoacyl-synthetase C-terminal extension PI860_15930 PF02801 Beta-ketoacyl synthase, C-terminal domain PI860_15930 PF00550 Phosphopantetheine attachment site PI860_15930 PF00698 Acyl transferase domain PI860_15930 PF00109 Beta-ketoacyl synthase, N-terminal domain PI860_15935 PF02801 Beta-ketoacyl synthase, C-terminal domain PI860_15935 PF00698 Acyl transferase domain PI860_15935 PF08240 Alcohol dehydrogenase GroES-like domain PI860_15935 PF16197 Ketoacyl-synthetase C-terminal extension PI860_15935 PF00109 Beta-ketoacyl synthase, N-terminal domain PI860_15935 PF08659 KR domain PI860_15935 PF14765 Polyketide synthase dehydratase PI860_15935 PF00550 Phosphopantetheine attachment site PI860_15940 PF00501 AMP-binding enzyme PI860_15940 PF13193 AMP-binding enzyme C-terminal domain PI860_15940 PF00668 Condensation domain PI860_15940 PF00550 Phosphopantetheine attachment site PI860_15950 PF13439 Glycosyltransferase Family 4 PI860_15950 PF00534 Glycosyl transferases group 1 PI860_15960 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PI860_15960 PF01648 4'-phosphopantetheinyl transferase superfamily PI860_15980 PF01047 MarR family PI860_15980 PF00480 ROK family PI860_15985 PF01979 Amidohydrolase family PI860_15990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PI860_15995 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PI860_15995 PF00367 phosphotransferase system, EIIB PI860_15995 PF02378 Phosphotransferase system, EIIC PI860_16000 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain PI860_16000 PF00728 Glycosyl hydrolase family 20, catalytic domain PI860_16000 PF02838 Glycosyl hydrolase family 20, domain 2 PI860_16000 PF03173 Putative carbohydrate binding domain PI860_16005 PF00749 tRNA synthetases class I (E and Q), catalytic domain PI860_16005 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PI860_16010 PF01475 Ferric uptake regulator family PI860_16020 PF00258 Flavodoxin PI860_16025 PF01402 Ribbon-helix-helix protein, copG family PI860_16035 PF12697 Alpha/beta hydrolase family PI860_16040 PF03925 SeqA protein C-terminal domain PI860_16040 PF17206 SeqA protein N-terminal domain PI860_16045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PI860_16045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PI860_16045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PI860_16045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PI860_16055 PF01047 MarR family PI860_16060 PF13406 Transglycosylase SLT domain PI860_16065 PF01066 CDP-alcohol phosphatidyltransferase PI860_16070 PF00005 ABC transporter PI860_16075 PF00528 Binding-protein-dependent transport system inner membrane component PI860_16080 PF13416 Bacterial extracellular solute-binding protein PI860_16085 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_16085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PI860_16085 PF00403 Heavy-metal-associated domain PI860_16090 PF02627 Carboxymuconolactone decarboxylase family PI860_16100 PF01625 Peptide methionine sulfoxide reductase PI860_16120 PF01103 Surface antigen PI860_16120 PF07244 Surface antigen variable number repeat PI860_16120 PF17243 POTRA domain TamA domain 1 PI860_16125 PF04357 TamB, inner membrane protein subunit of TAM complex PI860_16140 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PI860_16150 PF01464 Transglycosylase SLT domain PI860_16150 PF14718 Soluble lytic murein transglycosylase L domain PI860_16155 PF00356 Bacterial regulatory proteins, lacI family PI860_16165 PF03061 Thioesterase superfamily PI860_16170 PF03372 Endonuclease/Exonuclease/phosphatase family PI860_16175 PF01476 LysM domain PI860_16175 PF01464 Transglycosylase SLT domain PI860_16180 PF16123 Hydroxyacylglutathione hydrolase C-terminus PI860_16180 PF00753 Metallo-beta-lactamase superfamily PI860_16185 PF08241 Methyltransferase domain PI860_16190 PF00075 RNase H PI860_16195 PF00929 Exonuclease PI860_16205 PF11849 Domain of unknown function (DUF3369) PI860_16210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PI860_16210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PI860_16210 PF09317 Domain of unknown function (DUF1974) PI860_16210 PF02770 Acyl-CoA dehydrogenase, middle domain PI860_16215 PF13580 SIS domain PI860_16220 PF13230 Glutamine amidotransferases class-II PI860_16230 PF01933 Uncharacterised protein family UPF0052 PI860_16240 PF00072 Response regulator receiver domain PI860_16240 PF09456 RcsC Alpha-Beta-Loop (ABL) PI860_16240 PF00512 His Kinase A (phospho-acceptor) domain PI860_16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_16250 PF00072 Response regulator receiver domain PI860_16250 PF00196 Bacterial regulatory proteins, luxR family PI860_16255 PF00672 HAMP domain PI860_16255 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PI860_16255 PF07730 Histidine kinase PI860_16255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_16260 PF04055 Radical SAM superfamily PI860_16260 PF06463 Molybdenum Cofactor Synthesis C PI860_16265 PF12838 4Fe-4S dicluster domain PI860_16265 PF13187 4Fe-4S dicluster domain PI860_16275 PF10518 TAT (twin-arginine translocation) pathway signal sequence PI860_16275 PF01568 Molydopterin dinucleotide binding domain PI860_16275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PI860_16275 PF00384 Molybdopterin oxidoreductase PI860_16280 PF12838 4Fe-4S dicluster domain PI860_16280 PF12800 4Fe-4S binding domain PI860_16285 PF13237 4Fe-4S dicluster domain PI860_16285 PF12801 4Fe-4S binding domain PI860_16290 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) PI860_16295 PF03264 NapC/NirT cytochrome c family, N-terminal region PI860_16300 PF00994 Probable molybdopterin binding domain PI860_16305 PF01967 MoaC family PI860_16310 PF02597 ThiS family PI860_16315 PF02391 MoaE protein PI860_16325 PF00528 Binding-protein-dependent transport system inner membrane component PI860_16330 PF03459 TOBE domain PI860_16330 PF00005 ABC transporter PI860_16335 PF00561 alpha/beta hydrolase fold PI860_16340 PF06406 StbA protein PI860_16350 PF06291 Bor protein PI860_16355 PF06291 Bor protein PI860_16360 PF00899 ThiF family PI860_16365 PF00994 Probable molybdopterin binding domain PI860_16365 PF03453 MoeA N-terminal region (domain I and II) PI860_16365 PF03454 MoeA C-terminal region (domain IV) PI860_16370 PF01227 GTP cyclohydrolase I PI860_16375 PF00672 HAMP domain PI860_16375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_16375 PF17200 Single Cache domain 2 PI860_16380 PF01268 Formate--tetrahydrofolate ligase PI860_16390 PF03466 LysR substrate binding domain PI860_16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_16395 PF04264 YceI-like domain PI860_16420 PF07687 Peptidase dimerisation domain PI860_16420 PF01546 Peptidase family M20/M25/M40 PI860_16425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PI860_16425 PF17944 Arginine decarboxylase C-terminal helical extension PI860_16425 PF17810 Arginine decarboxylase helical bundle domain PI860_16440 PF00300 Histidine phosphatase superfamily (branch 1) PI860_16455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI860_16465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PI860_16465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PI860_16475 PF00849 RNA pseudouridylate synthase PI860_16475 PF01479 S4 domain PI860_16480 PF07690 Major Facilitator Superfamily PI860_16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_16490 PF03466 LysR substrate binding domain PI860_16500 PF10689 Protein of unknown function (DUF2496) PI860_16510 PF04391 Protein of unknown function (DUF533) PI860_16515 PF00155 Aminotransferase class I and II PI860_16515 PF00392 Bacterial regulatory proteins, gntR family PI860_16520 PF01654 Cytochrome bd terminal oxidase subunit I PI860_16525 PF02322 Cytochrome bd terminal oxidase subunit II PI860_16535 PF07690 Major Facilitator Superfamily PI860_16540 PF00248 Aldo/keto reductase family PI860_16545 PF03992 Antibiotic biosynthesis monooxygenase PI860_16575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_16575 PF03466 LysR substrate binding domain PI860_16580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PI860_16580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PI860_16585 PF00230 Major intrinsic protein PI860_16590 PF07690 Major Facilitator Superfamily PI860_16595 PF00455 DeoR C terminal sensor domain PI860_16595 PF08220 DeoR-like helix-turn-helix domain PI860_16605 PF01266 FAD dependent oxidoreductase PI860_16605 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PI860_16610 PF03009 Glycerophosphoryl diester phosphodiesterase family PI860_16615 PF00793 DAHP synthetase I family PI860_16620 PF01817 Chorismate mutase type II PI860_16620 PF02153 Prephenate dehydrogenase PI860_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_16625 PF03466 LysR substrate binding domain PI860_16630 PF04219 Protein of unknown function, DUF PI860_16635 PF03974 Ecotin PI860_16655 PF00326 Prolyl oligopeptidase family PI860_16655 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PI860_16660 PF07715 TonB-dependent Receptor Plug Domain PI860_16660 PF00593 TonB dependent receptor PI860_16665 PF11893 Domain of unknown function (DUF3413) PI860_16665 PF00884 Sulfatase PI860_16670 PF07208 Protein of unknown function (DUF1414) PI860_16675 PF04245 37-kD nucleoid-associated bacterial protein PI860_16680 PF01547 Bacterial extracellular solute-binding protein PI860_16685 PF00528 Binding-protein-dependent transport system inner membrane component PI860_16685 PF14785 Maltose transport system permease protein MalF P2 domain PI860_16690 PF00528 Binding-protein-dependent transport system inner membrane component PI860_16695 PF00005 ABC transporter PI860_16695 PF08402 TOBE domain PI860_16700 PF03976 Polyphosphate kinase 2 (PPK2) PI860_16705 PF00561 alpha/beta hydrolase fold PI860_16710 PF01594 AI-2E family transporter PI860_16715 PF01206 Sulfurtransferase TusA PI860_16720 PF01435 Peptidase family M48 PI860_16720 PF07720 Tetratricopeptide repeat PI860_16730 PF03960 ArsC family PI860_16740 PF04336 Acyl carrier protein phosphodiesterase PI860_16745 PF03956 Lysine exporter LysO PI860_16750 PF00005 ABC transporter PI860_16755 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_16760 PF00528 Binding-protein-dependent transport system inner membrane component PI860_16765 PF00528 Binding-protein-dependent transport system inner membrane component PI860_16780 PF04055 Radical SAM superfamily PI860_16785 PF00563 EAL domain PI860_16785 PF03707 Bacterial signalling protein N terminal repeat PI860_16785 PF00990 Diguanylate cyclase, GGDEF domain PI860_16795 PF00207 Alpha-2-macroglobulin family PI860_16795 PF07703 Alpha-2-macroglobulin bait region domain PI860_16795 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain PI860_16795 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain PI860_16795 PF11974 Bacterial alpha-2-macroglobulin MG3 domain PI860_16795 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain PI860_16795 PF17962 Bacterial macroglobulin domain 6 PI860_16795 PF01835 MG2 domain PI860_16795 PF07678 A-macroglobulin TED domain PI860_16800 PF06832 Penicillin-Binding Protein C-terminus Family PI860_16800 PF00912 Transglycosylase PI860_16800 PF00905 Penicillin binding protein transpeptidase domain PI860_16810 PF02568 Thiamine biosynthesis protein (ThiI) PI860_16810 PF02926 THUMP domain PI860_16820 PF03458 UPF0126 domain PI860_16825 PF07196 Flagellin hook IN motif PI860_16825 PF00700 Bacterial flagellin C-terminal helical region PI860_16825 PF00669 Bacterial flagellin N-terminal helical region PI860_16830 PF00669 Bacterial flagellin N-terminal helical region PI860_16830 PF00700 Bacterial flagellin C-terminal helical region PI860_16840 PF07196 Flagellin hook IN motif PI860_16840 PF07195 Flagellar hook-associated protein 2 C-terminus PI860_16840 PF02465 Flagellar hook-associated protein 2 N-terminus PI860_16845 PF02561 Flagellar protein FliS PI860_16865 PF01497 Periplasmic binding protein PI860_16875 PF01048 Phosphorylase superfamily PI860_16885 PF02535 ZIP Zinc transporter PI860_16890 PF00672 HAMP domain PI860_16890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_16895 PF00459 Inositol monophosphatase family PI860_16905 PF00043 Glutathione S-transferase, C-terminal domain PI860_16905 PF02798 Glutathione S-transferase, N-terminal domain PI860_16920 PF00528 Binding-protein-dependent transport system inner membrane component PI860_16925 PF00528 Binding-protein-dependent transport system inner membrane component PI860_16925 PF12911 N-terminal TM domain of oligopeptide transport permease C PI860_16930 PF00005 ABC transporter PI860_16935 PF07690 Major Facilitator Superfamily PI860_16940 PF03466 LysR substrate binding domain PI860_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_16945 PF02634 FdhD/NarQ family PI860_16960 PF05164 Cell division protein ZapA PI860_16965 PF03695 Uncharacterised protein family (UPF0149) PI860_16970 PF01494 FAD binding domain PI860_16975 PF01494 FAD binding domain PI860_16980 PF01571 Aminomethyltransferase folate-binding domain PI860_16980 PF08669 Glycine cleavage T-protein C-terminal barrel domain PI860_16985 PF01597 Glycine cleavage H-protein PI860_16990 PF02347 Glycine cleavage system P-protein PI860_17000 PF07690 Major Facilitator Superfamily PI860_17005 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_17005 PF13192 Thioredoxin domain PI860_17010 PF10417 C-terminal domain of 1-Cys peroxiredoxin PI860_17010 PF00578 AhpC/TSA family PI860_17015 PF00571 CBS domain PI860_17020 PF02547 Queuosine biosynthesis protein PI860_17025 PF01702 Queuine tRNA-ribosyltransferase PI860_17030 PF02699 Preprotein translocase subunit PI860_17035 PF07549 SecD/SecF GG Motif PI860_17035 PF13721 SecD export protein N-terminal TM region PI860_17035 PF02355 Protein export membrane protein PI860_17040 PF07549 SecD/SecF GG Motif PI860_17040 PF02355 Protein export membrane protein PI860_17045 PF00581 Rhodanese-like domain PI860_17050 PF13181 Tetratricopeptide repeat PI860_17050 PF07719 Tetratricopeptide repeat PI860_17055 PF01136 Peptidase family U32 PI860_17060 PF01136 Peptidase family U32 PI860_17065 PF02036 SCP-2 sterol transfer family PI860_17075 PF00588 SpoU rRNA Methylase family PI860_17080 PF02082 Transcriptional regulator PI860_17085 PF00266 Aminotransferase class-V PI860_17090 PF01592 NifU-like N terminal domain PI860_17095 PF01521 Iron-sulphur cluster biosynthesis PI860_17100 PF07743 HSCB C-terminal oligomerisation domain PI860_17100 PF00226 DnaJ domain PI860_17105 PF00012 Hsp70 protein PI860_17110 PF00111 2Fe-2S iron-sulfur cluster binding domain PI860_17115 PF00883 Cytosol aminopeptidase family, catalytic domain PI860_17115 PF12404 Peptidase PI860_17120 PF12404 Peptidase PI860_17120 PF00883 Cytosol aminopeptidase family, catalytic domain PI860_17125 PF00334 Nucleoside diphosphate kinase PI860_17130 PF04055 Radical SAM superfamily PI860_17140 PF13464 Domain of unknown function (DUF4115) PI860_17145 PF04551 GcpE protein PI860_17150 PF03129 Anticodon binding domain PI860_17150 PF13393 Histidyl-tRNA synthetase PI860_17155 PF09976 Tetratricopeptide repeat-like domain PI860_17165 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PI860_17165 PF01926 50S ribosome-binding GTPase PI860_17170 PF07191 zinc-ribbons PI860_17180 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_17180 PF01464 Transglycosylase SLT domain PI860_17185 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PI860_17185 PF02769 AIR synthase related protein, C-terminal domain PI860_17185 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PI860_17195 PF05661 Protein of unknown function (DUF808) PI860_17205 PF01432 Peptidase family M3 PI860_17205 PF08439 Oligopeptidase F PI860_17210 PF05728 Uncharacterised protein family (UPF0227) PI860_17215 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_17220 PF01906 Putative heavy-metal-binding PI860_17230 PF02016 LD-carboxypeptidase N-terminal domain PI860_17230 PF17676 LD-carboxypeptidase C-terminal domain PI860_17245 PF00696 Amino acid kinase family PI860_17245 PF01842 ACT domain PI860_17250 PF00583 Acetyltransferase (GNAT) family PI860_17250 PF00696 Amino acid kinase family PI860_17255 PF01625 Peptide methionine sulfoxide reductase PI860_17295 PF02308 MgtC family PI860_17310 PF02687 FtsX-like permease family PI860_17310 PF12704 MacB-like periplasmic core domain PI860_17325 PF03600 Citrate transporter PI860_17350 PF01593 Flavin containing amine oxidoreductase PI860_17355 PF03239 Iron permease FTR1 family PI860_17385 PF00324 Amino acid permease PI860_17395 PF03618 Kinase/pyrophosphorylase PI860_17400 PF00391 PEP-utilising enzyme, mobile domain PI860_17400 PF02896 PEP-utilising enzyme, TIM barrel domain PI860_17400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PI860_17410 PF01915 Glycosyl hydrolase family 3 C-terminal domain PI860_17410 PF00933 Glycosyl hydrolase family 3 N terminal domain PI860_17410 PF14310 Fibronectin type III-like domain PI860_17420 PF01483 Proprotein convertase P-domain PI860_17420 PF00082 Subtilase family PI860_17440 PF03180 NLPA lipoprotein PI860_17445 PF01569 PAP2 superfamily PI860_17450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI860_17450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI860_17450 PF11890 Domain of unknown function (DUF3410) PI860_17455 PF01118 Semialdehyde dehydrogenase, NAD binding domain PI860_17455 PF02774 Semialdehyde dehydrogenase, dimerisation domain PI860_17465 PF01416 tRNA pseudouridine synthase PI860_17470 PF17848 Acetyl-coA carboxylase zinc finger domain PI860_17470 PF01039 Carboxyl transferase domain PI860_17475 PF02875 Mur ligase family, glutamate ligase domain PI860_17475 PF08245 Mur ligase middle domain PI860_17480 PF05036 Sporulation related domain PI860_17485 PF04358 DsrC like protein PI860_17490 PF12805 FUSC-like inner membrane protein yccS PI860_17495 PF01027 Inhibitor of apoptosis-promoting Bax1 PI860_17505 PF08447 PAS fold PI860_17505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_17515 PF00849 RNA pseudouridylate synthase PI860_17525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI860_17540 PF14497 Glutathione S-transferase, C-terminal domain PI860_17540 PF02798 Glutathione S-transferase, N-terminal domain PI860_17545 PF00043 Glutathione S-transferase, C-terminal domain PI860_17545 PF13417 Glutathione S-transferase, N-terminal domain PI860_17555 PF13358 DDE superfamily endonuclease PI860_17555 PF13592 Winged helix-turn helix PI860_17560 PF03577 Peptidase family C69 PI860_17565 PF00733 Asparagine synthase PI860_17565 PF13537 Glutamine amidotransferase domain PI860_17575 PF00999 Sodium/hydrogen exchanger family PI860_17575 PF02254 TrkA-N domain PI860_17580 PF13344 Haloacid dehalogenase-like hydrolase PI860_17585 PF00962 Adenosine/AMP deaminase PI860_17590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PI860_17595 PF03471 Transporter associated domain PI860_17595 PF03741 Integral membrane protein TerC family PI860_17605 PF02913 FAD linked oxidases, C-terminal domain PI860_17605 PF01565 FAD binding domain PI860_17605 PF13183 4Fe-4S dicluster domain PI860_17615 PF03061 Thioesterase superfamily PI860_17620 PF03880 DbpA RNA binding domain PI860_17620 PF00270 DEAD/DEAH box helicase PI860_17620 PF00271 Helicase conserved C-terminal domain PI860_17630 PF13188 PAS domain PI860_17630 PF00563 EAL domain PI860_17630 PF00990 Diguanylate cyclase, GGDEF domain PI860_17630 PF03707 Bacterial signalling protein N terminal repeat PI860_17635 PF03553 Na+/H+ antiporter family PI860_17635 PF13726 Na+-H+ antiporter family PI860_17640 PF00929 Exonuclease PI860_17645 PF12729 Four helix bundle sensory module for signal transduction PI860_17645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_17645 PF00672 HAMP domain PI860_17650 PF00691 OmpA family PI860_17650 PF18393 MotY N-terminal domain PI860_17655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI860_17660 PF00633 Helix-hairpin-helix motif PI860_17660 PF00730 HhH-GPD superfamily base excision DNA repair protein PI860_17660 PF10576 Iron-sulfur binding domain of endonuclease III PI860_17665 PF02508 Rnf-Nqr subunit, membrane protein PI860_17670 PF04205 FMN-binding domain PI860_17675 PF03116 NQR2, RnfD, RnfE family PI860_17680 PF13375 RnfC Barrel sandwich hybrid domain PI860_17680 PF12838 4Fe-4S dicluster domain PI860_17680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PI860_17680 PF10531 SLBB domain PI860_17685 PF04060 Putative Fe-S cluster PI860_17690 PF02508 Rnf-Nqr subunit, membrane protein PI860_17695 PF00892 EamA-like transporter family PI860_17725 PF13592 Winged helix-turn helix PI860_17725 PF13358 DDE superfamily endonuclease PI860_17740 PF01740 STAS domain PI860_17740 PF00916 Sulfate permease family PI860_17775 PF05947 Type VI secretion system, TssF PI860_17795 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE PI860_17805 PF17871 AAA lid domain PI860_17805 PF07724 AAA domain (Cdc48 subfamily) PI860_17805 PF00004 ATPase family associated with various cellular activities (AAA) PI860_17805 PF10431 C-terminal, D2-small domain, of ClpB protein PI860_17810 PF00158 Sigma-54 interaction domain PI860_17810 PF02954 Bacterial regulatory protein, Fis family PI860_17820 PF06761 Intracellular multiplication and human macrophage-killing PI860_17820 PF14331 ImcF-related N-terminal domain PI860_17820 PF06744 Type VI secretion protein IcmF C-terminal PI860_17870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PI860_17870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PI860_17875 PF00313 'Cold-shock' DNA-binding domain PI860_17880 PF02617 ATP-dependent Clp protease adaptor protein ClpS PI860_17885 PF00004 ATPase family associated with various cellular activities (AAA) PI860_17885 PF07724 AAA domain (Cdc48 subfamily) PI860_17885 PF17871 AAA lid domain PI860_17885 PF02861 Clp amino terminal domain, pathogenicity island component PI860_17885 PF10431 C-terminal, D2-small domain, of ClpB protein PI860_17890 PF01176 Translation initiation factor 1A / IF-1 PI860_17895 PF04377 Arginine-tRNA-protein transferase, C terminus PI860_17895 PF04376 Arginine-tRNA-protein transferase, N terminus PI860_17900 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PI860_17905 PF05433 Glycine zipper 2TM domain PI860_17910 PF00990 Diguanylate cyclase, GGDEF domain PI860_17910 PF17158 Membrane-associated sensor, integral membrane domain PI860_17915 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_17925 PF01037 Lrp/AsnC ligand binding domain PI860_17930 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PI860_17930 PF17854 FtsK alpha domain PI860_17930 PF01580 FtsK/SpoIIIE family PI860_17930 PF09397 Ftsk gamma domain PI860_17935 PF03548 Outer membrane lipoprotein carrier protein LolA PI860_17940 PF00004 ATPase family associated with various cellular activities (AAA) PI860_17940 PF12002 MgsA AAA+ ATPase C terminal PI860_17940 PF16193 AAA C-terminal domain PI860_17945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PI860_17945 PF02403 Seryl-tRNA synthetase N-terminal domain PI860_17950 PF02674 Colicin V production protein PI860_17955 PF00156 Phosphoribosyl transferase domain PI860_17965 PF00005 ABC transporter PI860_17970 PF00005 ABC transporter PI860_17970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI860_17975 PF00528 Binding-protein-dependent transport system inner membrane component PI860_17975 PF12911 N-terminal TM domain of oligopeptide transport permease C PI860_17980 PF00528 Binding-protein-dependent transport system inner membrane component PI860_17985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_17990 PF02954 Bacterial regulatory protein, Fis family PI860_17990 PF00158 Sigma-54 interaction domain PI860_17995 PF04012 PspA/IM30 family PI860_18000 PF06667 Phage shock protein B PI860_18010 PF04317 YcjX-like family, DUF463 PI860_18015 PF05128 Domain of unknown function (DUF697) PI860_18020 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PI860_18025 PF01329 Pterin 4 alpha carbinolamine dehydratase PI860_18030 PF18024 Helix-turn-helix domain PI860_18030 PF00158 Sigma-54 interaction domain PI860_18035 PF13689 YfiR/HmsC-like PI860_18040 PF17152 Periplasmic sensor domain PI860_18040 PF00990 Diguanylate cyclase, GGDEF domain PI860_18045 PF00691 OmpA family PI860_18050 PF03741 Integral membrane protein TerC family PI860_18060 PF08891 YfcL protein PI860_18065 PF00501 AMP-binding enzyme PI860_18070 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region PI860_18070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PI860_18075 PF04172 LrgB-like family PI860_18080 PF03788 LrgA family PI860_18095 PF08411 Exonuclease C-terminal PI860_18095 PF00929 Exonuclease PI860_18105 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_18110 PF00795 Carbon-nitrogen hydrolase PI860_18115 PF00155 Aminotransferase class I and II PI860_18125 PF03466 LysR substrate binding domain PI860_18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_18130 PF11762 L-arabinose isomerase C-terminal domain PI860_18130 PF02610 L-arabinose isomerase PI860_18135 PF00596 Class II Aldolase and Adducin N-terminal domain PI860_18140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PI860_18145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI860_18150 PF00005 ABC transporter PI860_18155 PF02653 Branched-chain amino acid transport system / permease component PI860_18160 PF02311 AraC-like ligand binding domain PI860_18160 PF12833 Helix-turn-helix domain PI860_18165 PF00288 GHMP kinases N terminal domain PI860_18165 PF08544 GHMP kinases C terminal PI860_18165 PF10509 Galactokinase galactose-binding signature PI860_18170 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain PI860_18170 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain PI860_18175 PF16363 GDP-mannose 4,6 dehydratase PI860_18180 PF00356 Bacterial regulatory proteins, lacI family PI860_18185 PF02264 LamB porin PI860_18190 PF07745 Glycosyl hydrolase family 53 PI860_18195 PF07745 Glycosyl hydrolase family 53 PI860_18205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_18205 PF12729 Four helix bundle sensory module for signal transduction PI860_18205 PF00672 HAMP domain PI860_18225 PF13416 Bacterial extracellular solute-binding protein PI860_18230 PF00528 Binding-protein-dependent transport system inner membrane component PI860_18235 PF00528 Binding-protein-dependent transport system inner membrane component PI860_18240 PF07745 Glycosyl hydrolase family 53 PI860_18245 PF08532 Beta-galactosidase trimerisation domain PI860_18245 PF08533 Beta-galactosidase C-terminal domain PI860_18245 PF02449 Beta-galactosidase PI860_18250 PF02378 Phosphotransferase system, EIIC PI860_18250 PF00367 phosphotransferase system, EIIB PI860_18255 PF00224 Pyruvate kinase, barrel domain PI860_18255 PF02887 Pyruvate kinase, alpha/beta domain PI860_18260 PF00444 Ribosomal protein L36 PI860_18265 PF01197 Ribosomal protein L31 PI860_18280 PF01863 Protein of unknown function DUF45 PI860_18295 PF03606 C4-dicarboxylate anaerobic carrier PI860_18305 PF01266 FAD dependent oxidoreductase PI860_18305 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PI860_18310 PF00109 Beta-ketoacyl synthase, N-terminal domain PI860_18310 PF02801 Beta-ketoacyl synthase, C-terminal domain PI860_18325 PF00285 Citrate synthase, C-terminal domain PI860_18330 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PI860_18335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PI860_18340 PF00890 FAD binding domain PI860_18340 PF02910 Fumarate reductase flavoprotein C-term PI860_18345 PF13085 2Fe-2S iron-sulfur cluster binding domain PI860_18350 PF02779 Transketolase, pyrimidine binding domain PI860_18350 PF16870 2-oxoglutarate dehydrogenase C-terminal PI860_18350 PF16078 2-oxoglutarate dehydrogenase N-terminus PI860_18350 PF00676 Dehydrogenase E1 component PI860_18355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PI860_18355 PF00364 Biotin-requiring enzyme PI860_18355 PF02817 e3 binding domain PI860_18360 PF08442 ATP-grasp domain PI860_18360 PF00549 CoA-ligase PI860_18365 PF02629 CoA binding domain PI860_18365 PF00549 CoA-ligase PI860_18370 PF03692 Putative zinc- or iron-chelating domain PI860_18375 PF02901 Pyruvate formate lyase-like PI860_18375 PF01228 Glycine radical PI860_18380 PF01226 Formate/nitrite transporter PI860_18385 PF18381 YcaO cyclodehydratase C-terminal domain PI860_18385 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding PI860_18390 PF01118 Semialdehyde dehydrogenase, NAD binding domain PI860_18390 PF02774 Semialdehyde dehydrogenase, dimerisation domain PI860_18395 PF05193 Peptidase M16 inactive domain PI860_18395 PF00675 Insulinase (Peptidase family M16) PI860_18400 PF01053 Cys/Met metabolism PLP-dependent enzyme PI860_18410 PF13460 NAD(P)H-binding PI860_18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_18415 PF03466 LysR substrate binding domain PI860_18420 PF00106 short chain dehydrogenase PI860_18425 PF12833 Helix-turn-helix domain PI860_18425 PF06445 GyrI-like small molecule binding domain PI860_18430 PF00593 TonB dependent receptor PI860_18430 PF07715 TonB-dependent Receptor Plug Domain PI860_18440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_18440 PF03466 LysR substrate binding domain PI860_18445 PF08267 Cobalamin-independent synthase, N-terminal domain PI860_18445 PF01717 Cobalamin-independent synthase, Catalytic domain PI860_18460 PF07969 Amidohydrolase family PI860_18470 PF01266 FAD dependent oxidoreductase PI860_18475 PF04244 Deoxyribodipyrimidine photo-lyase-related protein PI860_18485 PF01212 Beta-eliminating lyase PI860_18490 PF00768 D-alanyl-D-alanine carboxypeptidase PI860_18500 PF03918 Cytochrome C biogenesis protein PI860_18505 PF08534 Redoxin PI860_18510 PF01578 Cytochrome C assembly protein PI860_18510 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PI860_18515 PF03916 Polysulphide reductase, NrfD PI860_18520 PF00037 4Fe-4S binding domain PI860_18520 PF13247 4Fe-4S dicluster domain PI860_18525 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) PI860_18525 PF13435 Cytochrome c554 and c-prime PI860_18530 PF02335 Cytochrome c552 PI860_18535 PF13183 4Fe-4S dicluster domain PI860_18535 PF02754 Cysteine-rich domain PI860_18540 PF00890 FAD binding domain PI860_18545 PF01266 FAD dependent oxidoreductase PI860_18545 PF04324 BFD-like [2Fe-2S] binding domain PI860_18550 PF02810 SEC-C motif PI860_18555 PF17200 Single Cache domain 2 PI860_18555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_18555 PF00672 HAMP domain PI860_18560 PF01047 MarR family PI860_18560 PF00480 ROK family PI860_18565 PF17203 Single cache domain 3 PI860_18565 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PI860_18565 PF00989 PAS fold PI860_18565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_18570 PF12431 Transcriptional regulator PI860_18570 PF08279 HTH domain PI860_18570 PF00072 Response regulator receiver domain PI860_18575 PF01970 Tripartite tricarboxylate transporter TctA family PI860_18590 PF01464 Transglycosylase SLT domain PI860_18590 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_18595 PF06826 Predicted Permease Membrane Region PI860_18595 PF02080 TrkA-C domain PI860_18605 PF02151 UvrB/uvrC motif PI860_18605 PF12344 Ultra-violet resistance protein B PI860_18605 PF04851 Type III restriction enzyme, res subunit PI860_18605 PF00271 Helicase conserved C-terminal domain PI860_18605 PF17757 UvrB interaction domain PI860_18615 PF09335 SNARE associated Golgi protein PI860_18620 PF02600 Disulfide bond formation protein DsbB PI860_18625 PF06450 Bacterial Na+/H+ antiporter B (NhaB) PI860_18630 PF07840 FadR C-terminal domain PI860_18630 PF00392 Bacterial regulatory proteins, gntR family PI860_18635 PF04293 SpoVR like protein PI860_18640 PF04285 Protein of unknown function (DUF444) PI860_18645 PF08298 PrkA AAA domain PI860_18645 PF06798 PrkA serine protein kinase C-terminal domain PI860_18650 PF00271 Helicase conserved C-terminal domain PI860_18650 PF00270 DEAD/DEAH box helicase PI860_18650 PF00570 HRDC domain PI860_18650 PF16124 RecQ zinc-binding PI860_18650 PF09382 RQC domain PI860_18655 PF00375 Sodium:dicarboxylate symporter family PI860_18660 PF03222 Tryptophan/tyrosine permease family PI860_18665 PF00293 NUDIX domain PI860_18670 PF04715 Anthranilate synthase component I, N terminal region PI860_18670 PF00425 chorismate binding enzyme PI860_18695 PF00343 Carbohydrate phosphorylase PI860_18700 PF00939 Sodium:sulfate symporter transmembrane region PI860_18705 PF00085 Thioredoxin PI860_18710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI860_18710 PF00072 Response regulator receiver domain PI860_18710 PF01627 Hpt domain PI860_18710 PF00512 His Kinase A (phospho-acceptor) domain PI860_18710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_18710 PF00672 HAMP domain PI860_18720 PF00664 ABC transporter transmembrane region PI860_18720 PF00005 ABC transporter PI860_18735 PF01575 MaoC like domain PI860_18740 PF00561 alpha/beta hydrolase fold PI860_18740 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PI860_18760 PF08543 Phosphomethylpyrimidine kinase PI860_18765 PF03992 Antibiotic biosynthesis monooxygenase PI860_18770 PF00465 Iron-containing alcohol dehydrogenase PI860_18790 PF01928 CYTH domain PI860_18805 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PI860_18815 PF13673 Acetyltransferase (GNAT) domain PI860_18820 PF00270 DEAD/DEAH box helicase PI860_18820 PF00271 Helicase conserved C-terminal domain PI860_18825 PF00255 Glutathione peroxidase PI860_18835 PF01820 D-ala D-ala ligase N-terminus PI860_18835 PF07478 D-ala D-ala ligase C-terminus PI860_18845 PF03942 DTW domain PI860_18850 PF01925 Sulfite exporter TauE/SafE PI860_18855 PF03466 LysR substrate binding domain PI860_18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_18865 PF12833 Helix-turn-helix domain PI860_18865 PF14525 AraC-binding-like domain PI860_18870 PF11398 Protein of unknown function (DUF2813) PI860_18880 PF13592 Winged helix-turn helix PI860_18880 PF13358 DDE superfamily endonuclease PI860_18925 PF00883 Cytosol aminopeptidase family, catalytic domain PI860_18925 PF02789 Cytosol aminopeptidase family, N-terminal domain PI860_18930 PF13419 Haloacid dehalogenase-like hydrolase PI860_18960 PF13592 Winged helix-turn helix PI860_18960 PF13358 DDE superfamily endonuclease PI860_18980 PF00365 Phosphofructokinase PI860_18985 PF00121 Triosephosphate isomerase PI860_18990 PF02698 DUF218 domain PI860_18995 PF13847 Methyltransferase domain PI860_19000 PF17192 MukF middle domain PI860_19000 PF17193 MukF C-terminal domain PI860_19000 PF03882 MukF winged-helix domain PI860_19005 PF04288 MukE-like family PI860_19010 PF04310 MukB N-terminal PI860_19010 PF16330 MukB hinge domain PI860_19015 PF05036 Sporulation related domain PI860_19015 PF03330 Lytic transglycolase PI860_19075 PF07152 YaeQ protein PI860_19085 PF07690 Major Facilitator Superfamily PI860_19090 PF00005 ABC transporter PI860_19095 PF01032 FecCD transport family PI860_19115 PF05433 Glycine zipper 2TM domain PI860_19125 PF03606 C4-dicarboxylate anaerobic carrier PI860_19140 PF03466 LysR substrate binding domain PI860_19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_19145 PF01261 Xylose isomerase-like TIM barrel PI860_19150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PI860_19150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PI860_19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_19155 PF03466 LysR substrate binding domain PI860_19165 PF03279 Bacterial lipid A biosynthesis acyltransferase PI860_19170 PF03279 Bacterial lipid A biosynthesis acyltransferase PI860_19185 PF00990 Diguanylate cyclase, GGDEF domain PI860_19195 PF03104 DNA polymerase family B, exonuclease domain PI860_19195 PF00136 DNA polymerase family B PI860_19220 PF01554 MatE PI860_19225 PF06786 Uncharacterised protein family (UPF0253) PI860_19230 PF00677 Lumazine binding domain PI860_19240 PF13419 Haloacid dehalogenase-like hydrolase PI860_19245 PF02222 ATP-grasp domain PI860_19250 PF00892 EamA-like transporter family PI860_19255 PF02525 Flavodoxin-like fold PI860_19280 PF13509 S1 domain PI860_19280 PF17783 CvfB-like winged helix domain PI860_19290 PF04269 Protein of unknown function, DUF440 PI860_19300 PF00912 Transglycosylase PI860_19305 PF04269 Protein of unknown function, DUF440 PI860_19310 PF03776 Septum formation topological specificity factor MinE PI860_19315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PI860_19320 PF03775 Septum formation inhibitor MinC, C-terminal domain PI860_19320 PF05209 Septum formation inhibitor MinC, N-terminal domain PI860_19325 PF05166 YcgL domain PI860_19330 PF13406 Transglycosylase SLT domain PI860_19335 PF03313 Serine dehydratase alpha chain PI860_19335 PF03315 Serine dehydratase beta chain PI860_19340 PF03313 Serine dehydratase alpha chain PI860_19340 PF03315 Serine dehydratase beta chain PI860_19345 PF06865 Pyrimidine/purine nucleoside phosphorylase PI860_19350 PF00375 Sodium:dicarboxylate symporter family PI860_19355 PF00376 MerR family regulatory protein PI860_19355 PF09278 MerR, DNA binding PI860_19360 PF02803 Thiolase, C-terminal domain PI860_19360 PF00108 Thiolase, N-terminal domain PI860_19365 PF00563 EAL domain PI860_19365 PF08668 HDOD domain PI860_19370 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PI860_19375 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PI860_19385 PF04542 Sigma-70 region 2 PI860_19385 PF04545 Sigma-70, region 4 PI860_19400 PF07728 AAA domain (dynein-related subfamily) PI860_19400 PF17863 AAA lid domain PI860_19400 PF13519 von Willebrand factor type A domain PI860_19410 PF01882 Protein of unknown function DUF58 PI860_19415 PF07726 ATPase family associated with various cellular activities (AAA) PI860_19415 PF17863 AAA lid domain PI860_19420 PF00108 Thiolase, N-terminal domain PI860_19420 PF02803 Thiolase, C-terminal domain PI860_19425 PF00378 Enoyl-CoA hydratase/isomerase PI860_19425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PI860_19425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PI860_19430 PF03831 PhnA domain PI860_19430 PF08274 PhnA Zinc-Ribbon PI860_19440 PF08329 Chitinase A, N-terminal domain PI860_19440 PF00704 Glycosyl hydrolases family 18 PI860_19445 PF13592 Winged helix-turn helix PI860_19445 PF13358 DDE superfamily endonuclease PI860_19450 PF13407 Periplasmic binding protein domain PI860_19455 PF00005 ABC transporter PI860_19460 PF02653 Branched-chain amino acid transport system / permease component PI860_19465 PF02653 Branched-chain amino acid transport system / permease component PI860_19470 PF00990 Diguanylate cyclase, GGDEF domain PI860_19470 PF00360 Phytochrome region PI860_19470 PF00563 EAL domain PI860_19470 PF01590 GAF domain PI860_19475 PF04972 BON domain PI860_19500 PF01338 Bacillus thuringiensis toxin PI860_19525 PF00501 AMP-binding enzyme PI860_19525 PF13193 AMP-binding enzyme C-terminal domain PI860_19530 PF08279 HTH domain PI860_19530 PF13280 WYL domain PI860_19540 PF01502 Phosphoribosyl-AMP cyclohydrolase PI860_19540 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PI860_19545 PF00977 Histidine biosynthesis protein PI860_19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_19550 PF00512 His Kinase A (phospho-acceptor) domain PI860_19550 PF01627 Hpt domain PI860_19550 PF00072 Response regulator receiver domain PI860_19555 PF00990 Diguanylate cyclase, GGDEF domain PI860_19555 PF08448 PAS fold PI860_19560 PF00072 Response regulator receiver domain PI860_19565 PF00977 Histidine biosynthesis protein PI860_19570 PF00117 Glutamine amidotransferase class-I PI860_19575 PF08645 Polynucleotide kinase 3 phosphatase PI860_19575 PF00475 Imidazoleglycerol-phosphate dehydratase PI860_19580 PF00155 Aminotransferase class I and II PI860_19585 PF00815 Histidinol dehydrogenase PI860_19590 PF01634 ATP phosphoribosyltransferase PI860_19590 PF08029 HisG, C-terminal domain PI860_19600 PF13307 Helicase C-terminal domain PI860_19600 PF04851 Type III restriction enzyme, res subunit PI860_19605 PF00814 Glycoprotease family PI860_19615 PF12697 Alpha/beta hydrolase family PI860_19620 PF13193 AMP-binding enzyme C-terminal domain PI860_19620 PF00501 AMP-binding enzyme PI860_19625 PF01612 3'-5' exonuclease PI860_19625 PF00570 HRDC domain PI860_19640 PF01207 Dihydrouridine synthase (Dus) PI860_19645 PF04304 Protein of unknown function (DUF454) PI860_19650 PF00156 Phosphoribosyl transferase domain PI860_19655 PF12169 DNA polymerase III subunits gamma and tau domain III PI860_19655 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PI860_19655 PF12170 DNA polymerase III tau subunit V interacting with alpha PI860_19660 PF02575 YbaB/EbfC DNA-binding family PI860_19665 PF07670 Nucleoside recognition PI860_19670 PF00072 Response regulator receiver domain PI860_19670 PF00196 Bacterial regulatory proteins, luxR family PI860_19675 PF00571 CBS domain PI860_19675 PF01368 DHH family PI860_19675 PF02272 DHHA1 domain PI860_19675 PF01743 Poly A polymerase head domain PI860_19680 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PI860_19680 PF00271 Helicase conserved C-terminal domain PI860_19680 PF11898 Domain of unknown function (DUF3418) PI860_19680 PF00270 DEAD/DEAH box helicase PI860_19680 PF04408 Helicase associated domain (HA2) PI860_19690 PF01386 Ribosomal L25p family PI860_19695 PF00753 Metallo-beta-lactamase superfamily PI860_19705 PF00586 AIR synthase related protein, N-terminal domain PI860_19705 PF02769 AIR synthase related protein, C-terminal domain PI860_19720 PF10672 S-adenosylmethionine-dependent methyltransferase PI860_19720 PF17785 PUA-like domain PI860_19725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_19725 PF00672 HAMP domain PI860_19725 PF12729 Four helix bundle sensory module for signal transduction PI860_19730 PF00708 Acylphosphatase PI860_19735 PF02798 Glutathione S-transferase, N-terminal domain PI860_19735 PF00043 Glutathione S-transferase, C-terminal domain PI860_19745 PF08264 Anticodon-binding domain of tRNA PI860_19745 PF09334 tRNA synthetases class I (M) PI860_19745 PF01588 Putative tRNA binding domain PI860_19750 PF10609 NUBPL iron-transfer P-loop NTPase PI860_19755 PF00485 Phosphoribulokinase / Uridine kinase family PI860_19760 PF00692 dUTPase PI860_19765 PF01384 Phosphate transporter family PI860_19770 PF12111 Polyribonucleotide phosphorylase C terminal PI860_19770 PF10150 Ribonuclease E/G family PI860_19770 PF00575 S1 RNA binding domain PI860_19775 PF00849 RNA pseudouridylate synthase PI860_19775 PF01479 S4 domain PI860_19780 PF13419 Haloacid dehalogenase-like hydrolase PI860_19785 PF02545 Maf-like protein PI860_19790 PF02620 Large ribosomal RNA subunit accumulation protein YceD PI860_19795 PF01783 Ribosomal L32p protein family PI860_19800 PF02504 Fatty acid synthesis protein PI860_19805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PI860_19805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PI860_19810 PF00698 Acyl transferase domain PI860_19820 PF00550 Phosphopantetheine attachment site PI860_19825 PF00109 Beta-ketoacyl synthase, N-terminal domain PI860_19825 PF02801 Beta-ketoacyl synthase, C-terminal domain PI860_19830 PF01063 Amino-transferase class IV PI860_19835 PF02618 YceG-like family PI860_19840 PF02223 Thymidylate kinase PI860_19845 PF09115 DNA polymerase III, delta subunit, C terminal PI860_19850 PF01026 TatD related DNase PI860_19865 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF PI860_19865 PF01189 16S rRNA methyltransferase RsmB/F PI860_19865 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF PI860_19875 PF04403 Paraquat-inducible protein A PI860_19895 PF03972 MmgE/PrpD family PI860_19910 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain PI860_19910 PF06974 Protein of unknown function (DUF1298) PI860_19935 PF00106 short chain dehydrogenase PI860_20010 PF05707 Zonular occludens toxin (Zot) PI860_20015 PF00665 Integrase core domain PI860_20020 PF01695 IstB-like ATP binding protein PI860_20090 PF05707 Zonular occludens toxin (Zot) PI860_20105 PF13654 AAA domain PI860_20105 PF05362 Lon protease (S16) C-terminal proteolytic domain PI860_20110 PF07977 FabA-like domain PI860_20115 PF04957 Ribosome modulation factor PI860_20125 PF00005 ABC transporter PI860_20125 PF16326 ABC transporter C-terminal domain PI860_20125 PF12848 ABC transporter PI860_20135 PF10672 S-adenosylmethionine-dependent methyltransferase PI860_20135 PF02926 THUMP domain PI860_20135 PF01170 Putative RNA methylase family UPF0020 PI860_20140 PF07126 Cell-division protein ZapC PI860_20145 PF01180 Dihydroorotate dehydrogenase PI860_20150 PF05088 Bacterial NAD-glutamate dehydrogenase PI860_20160 PF01433 Peptidase family M1 domain PI860_20160 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PI860_20160 PF11940 Domain of unknown function (DUF3458) Ig-like fold PI860_20165 PF11818 C-terminal domain of tail specific protease (DUF3340) PI860_20165 PF00595 PDZ domain PI860_20165 PF03572 Peptidase family S41 PI860_20165 PF17804 Tail specific protease N-terminal domain PI860_20170 PF17516 ProQ C-terminal domain PI860_20170 PF04352 ProQ/FINO family PI860_20175 PF13185 GAF domain PI860_20185 PF00115 Cytochrome C and Quinol oxidase polypeptide I PI860_20200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PI860_20200 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PI860_20210 PF00403 Heavy-metal-associated domain PI860_20225 PF00027 Cyclic nucleotide-binding domain PI860_20225 PF13545 Crp-like helix-turn-helix domain PI860_20230 PF00582 Universal stress protein family PI860_20235 PF01171 PP-loop family PI860_20250 PF02798 Glutathione S-transferase, N-terminal domain PI860_20250 PF00043 Glutathione S-transferase, C-terminal domain PI860_20255 PF05025 RbsD / FucU transport protein family PI860_20265 PF02653 Branched-chain amino acid transport system / permease component PI860_20270 PF13407 Periplasmic binding protein domain PI860_20275 PF00294 pfkB family carbohydrate kinase PI860_20280 PF00356 Bacterial regulatory proteins, lacI family PI860_20285 PF17152 Periplasmic sensor domain PI860_20285 PF00990 Diguanylate cyclase, GGDEF domain PI860_20295 PF02146 Sir2 family PI860_20315 PF00216 Bacterial DNA-binding protein PI860_20320 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PI860_20320 PF03483 B3/4 domain PI860_20320 PF03147 Ferredoxin-fold anticodon binding domain PI860_20320 PF01588 Putative tRNA binding domain PI860_20320 PF03484 tRNA synthetase B5 domain PI860_20325 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PI860_20325 PF01409 tRNA synthetases class II core domain (F) PI860_20330 PF00453 Ribosomal protein L20 PI860_20335 PF01632 Ribosomal protein L35 PI860_20340 PF05198 Translation initiation factor IF-3, N-terminal domain PI860_20340 PF00707 Translation initiation factor IF-3, C-terminal domain PI860_20345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PI860_20345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PI860_20345 PF03129 Anticodon binding domain PI860_20345 PF02824 TGS domain PI860_20355 PF04055 Radical SAM superfamily PI860_20365 PF03989 DNA gyrase C-terminal domain, beta-propeller PI860_20365 PF00521 DNA gyrase/topoisomerase IV, subunit A PI860_20375 PF13419 Haloacid dehalogenase-like hydrolase PI860_20380 PF03477 ATP cone domain PI860_20380 PF02867 Ribonucleotide reductase, barrel domain PI860_20380 PF00317 Ribonucleotide reductase, all-alpha domain PI860_20385 PF00268 Ribonucleotide reductase, small chain PI860_20390 PF00111 2Fe-2S iron-sulfur cluster binding domain PI860_20395 PF06725 3D domain PI860_20395 PF03562 MltA specific insert domain PI860_20400 PF06945 Protein of unknown function (DUF1289) PI860_20405 PF02378 Phosphotransferase system, EIIC PI860_20405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI860_20410 PF00294 pfkB family carbohydrate kinase PI860_20415 PF00381 PTS HPr component phosphorylation site PI860_20415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI860_20420 PF00356 Bacterial regulatory proteins, lacI family PI860_20420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI860_20425 PF03222 Tryptophan/tyrosine permease family PI860_20440 PF00270 DEAD/DEAH box helicase PI860_20440 PF00271 Helicase conserved C-terminal domain PI860_20450 PF01264 Chorismate synthase PI860_20455 PF05175 Methyltransferase small domain PI860_20460 PF01713 Smr domain PI860_20465 PF08448 PAS fold PI860_20465 PF00990 Diguanylate cyclase, GGDEF domain PI860_20485 PF13358 DDE superfamily endonuclease PI860_20485 PF13592 Winged helix-turn helix PI860_20520 PF01925 Sulfite exporter TauE/SafE PI860_20525 PF13520 Amino acid permease PI860_20535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PI860_20535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PI860_20540 PF00378 Enoyl-CoA hydratase/isomerase PI860_20545 PF00378 Enoyl-CoA hydratase/isomerase PI860_20550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PI860_20550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PI860_20550 PF02770 Acyl-CoA dehydrogenase, middle domain PI860_20555 PF00171 Aldehyde dehydrogenase family PI860_20560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PI860_20560 PF02770 Acyl-CoA dehydrogenase, middle domain PI860_20560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PI860_20565 PF01039 Carboxyl transferase domain PI860_20570 PF00378 Enoyl-CoA hydratase/isomerase PI860_20575 PF02785 Biotin carboxylase C-terminal domain PI860_20575 PF00289 Biotin carboxylase, N-terminal domain PI860_20575 PF00364 Biotin-requiring enzyme PI860_20575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PI860_20580 PF00682 HMGL-like PI860_20585 PF00376 MerR family regulatory protein PI860_20585 PF09278 MerR, DNA binding PI860_20600 PF01184 GPR1/FUN34/yaaH family PI860_20610 PF00583 Acetyltransferase (GNAT) family PI860_20615 PF01235 Sodium:alanine symporter family PI860_20620 PF00378 Enoyl-CoA hydratase/isomerase PI860_20620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PI860_20620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PI860_20635 PF04341 Protein of unknown function, DUF485 PI860_20640 PF00474 Sodium:solute symporter family PI860_20645 PF00005 ABC transporter PI860_20645 PF12848 ABC transporter PI860_20650 PF13145 PPIC-type PPIASE domain PI860_20655 PF00216 Bacterial DNA-binding protein PI860_20660 PF00004 ATPase family associated with various cellular activities (AAA) PI860_20660 PF05362 Lon protease (S16) C-terminal proteolytic domain PI860_20660 PF02190 ATP-dependent protease La (LON) substrate-binding domain PI860_20665 PF07724 AAA domain (Cdc48 subfamily) PI860_20665 PF10431 C-terminal, D2-small domain, of ClpB protein PI860_20665 PF06689 ClpX C4-type zinc finger PI860_20670 PF00574 Clp protease PI860_20675 PF05698 Bacterial trigger factor protein (TF) C-terminus PI860_20675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI860_20675 PF05697 Bacterial trigger factor protein (TF) PI860_20690 PF02687 FtsX-like permease family PI860_20690 PF12704 MacB-like periplasmic core domain PI860_20695 PF00005 ABC transporter PI860_20700 PF02687 FtsX-like permease family PI860_20700 PF12704 MacB-like periplasmic core domain PI860_20710 PF02559 CarD-like/TRCF domain PI860_20710 PF00271 Helicase conserved C-terminal domain PI860_20710 PF03461 TRCF domain PI860_20710 PF17757 UvrB interaction domain PI860_20710 PF00270 DEAD/DEAH box helicase PI860_20715 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PI860_20720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_20725 PF00892 EamA-like transporter family PI860_20735 PF00300 Histidine phosphatase superfamily (branch 1) PI860_20740 PF16187 Middle or third domain of peptidase_M16 PI860_20740 PF00675 Insulinase (Peptidase family M16) PI860_20740 PF05193 Peptidase M16 inactive domain PI860_20745 PF05724 Thiopurine S-methyltransferase (TPMT) PI860_20775 PF02540 NAD synthase PI860_20775 PF00117 Glutamine amidotransferase class-I PI860_20775 PF00958 GMP synthase C terminal domain PI860_20780 PF00571 CBS domain PI860_20780 PF00478 IMP dehydrogenase / GMP reductase domain PI860_20790 PF01618 MotA/TolQ/ExbB proton channel family PI860_20795 PF02472 Biopolymer transport protein ExbD/TolR PI860_20800 PF01292 Prokaryotic cytochrome b561 PI860_20805 PF02601 Exonuclease VII, large subunit PI860_20805 PF13742 OB-fold nucleic acid binding domain PI860_20810 PF04055 Radical SAM superfamily PI860_20820 PF00793 DAHP synthetase I family PI860_20825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PI860_20830 PF00266 Aminotransferase class-V PI860_20835 PF00766 Electron transfer flavoprotein FAD-binding domain PI860_20835 PF01012 Electron transfer flavoprotein domain PI860_20840 PF01012 Electron transfer flavoprotein domain PI860_20850 PF01544 CorA-like Mg2+ transporter protein PI860_20855 PF11143 Protein of unknown function (DUF2919) PI860_20870 PF07715 TonB-dependent Receptor Plug Domain PI860_20870 PF00593 TonB dependent receptor PI860_20875 PF01032 FecCD transport family PI860_20880 PF01032 FecCD transport family PI860_20885 PF00005 ABC transporter PI860_20890 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PI860_20890 PF01648 4'-phosphopantetheinyl transferase superfamily PI860_20895 PF01497 Periplasmic binding protein PI860_20900 PF00501 AMP-binding enzyme PI860_20900 PF00109 Beta-ketoacyl synthase, N-terminal domain PI860_20900 PF16197 Ketoacyl-synthetase C-terminal extension PI860_20900 PF02801 Beta-ketoacyl synthase, C-terminal domain PI860_20900 PF08659 KR domain PI860_20900 PF00550 Phosphopantetheine attachment site PI860_20900 PF14765 Polyketide synthase dehydratase PI860_20900 PF00668 Condensation domain PI860_20900 PF13193 AMP-binding enzyme C-terminal domain PI860_20905 PF00501 AMP-binding enzyme PI860_20905 PF13193 AMP-binding enzyme C-terminal domain PI860_20905 PF00668 Condensation domain PI860_20905 PF07993 Male sterility protein PI860_20905 PF00550 Phosphopantetheine attachment site PI860_20915 PF00550 Phosphopantetheine attachment site PI860_20915 PF00975 Thioesterase domain PI860_20915 PF00501 AMP-binding enzyme PI860_20915 PF13193 AMP-binding enzyme C-terminal domain PI860_20915 PF00668 Condensation domain PI860_20920 PF00857 Isochorismatase family PI860_20920 PF00550 Phosphopantetheine attachment site PI860_20925 PF13193 AMP-binding enzyme C-terminal domain PI860_20925 PF00501 AMP-binding enzyme PI860_20930 PF00425 chorismate binding enzyme PI860_20935 PF07273 Protein of unknown function (DUF1439) PI860_20945 PF00483 Nucleotidyl transferase PI860_20950 PF00563 EAL domain PI860_20950 PF00990 Diguanylate cyclase, GGDEF domain PI860_20950 PF03707 Bacterial signalling protein N terminal repeat PI860_20965 PF00672 HAMP domain PI860_20965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_20965 PF17200 Single Cache domain 2 PI860_20970 PF00294 pfkB family carbohydrate kinase PI860_20975 PF01124 MAPEG family PI860_20980 PF00762 Ferrochelatase PI860_20985 PF05191 Adenylate kinase, active site lid PI860_20990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_20990 PF00183 Hsp90 protein PI860_20995 PF02132 RecR protein PI860_20995 PF13662 Toprim domain PI860_21000 PF02634 FdhD/NarQ family PI860_21005 PF02954 Bacterial regulatory protein, Fis family PI860_21005 PF00158 Sigma-54 interaction domain PI860_21005 PF01590 GAF domain PI860_21020 PF12800 4Fe-4S binding domain PI860_21020 PF13247 4Fe-4S dicluster domain PI860_21025 PF07693 KAP family P-loop domain PI860_21040 PF02705 K+ potassium transporter PI860_21045 PF12798 4Fe-4S binding domain PI860_21045 PF00037 4Fe-4S binding domain PI860_21050 PF00361 Proton-conducting membrane transporter PI860_21055 PF00146 NADH dehydrogenase PI860_21060 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PI860_21060 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PI860_21060 PF00374 Nickel-dependent hydrogenase PI860_21065 PF12838 4Fe-4S dicluster domain PI860_21070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PI860_21075 PF07450 Formate hydrogenlyase maturation protein HycH PI860_21080 PF01750 Hydrogenase maturation protease PI860_21090 PF03841 L-seryl-tRNA selenium transferase PI860_21090 PF12390 Selenocysteine synthase N terminal PI860_21095 PF09107 Elongation factor SelB, winged helix PI860_21095 PF00009 Elongation factor Tu GTP binding domain PI860_21095 PF03144 Elongation factor Tu domain 2 PI860_21095 PF09106 Elongation factor SelB, winged helix PI860_21100 PF01300 Telomere recombination PI860_21100 PF17788 HypF Kae1-like domain PI860_21100 PF07503 HypF finger PI860_21100 PF00708 Acylphosphatase PI860_21105 PF01455 HupF/HypC family PI860_21110 PF01924 Hydrogenase formation hypA family PI860_21115 PF02769 AIR synthase related protein, C-terminal domain PI860_21115 PF00586 AIR synthase related protein, N-terminal domain PI860_21120 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PI860_21125 PF02492 CobW/HypB/UreG, nucleotide-binding domain PI860_21130 PF08402 TOBE domain PI860_21130 PF00005 ABC transporter PI860_21135 PF00005 ABC transporter PI860_21140 PF00528 Binding-protein-dependent transport system inner membrane component PI860_21140 PF12911 N-terminal TM domain of oligopeptide transport permease C PI860_21145 PF00528 Binding-protein-dependent transport system inner membrane component PI860_21150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_21155 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE PI860_21160 PF01750 Hydrogenase maturation protease PI860_21165 PF00374 Nickel-dependent hydrogenase PI860_21170 PF03916 Polysulphide reductase, NrfD PI860_21175 PF13247 4Fe-4S dicluster domain PI860_21180 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal PI860_21180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PI860_21185 PF01168 Alanine racemase, N-terminal domain PI860_21185 PF00842 Alanine racemase, C-terminal domain PI860_21200 PF10722 Putative bacterial sensory transduction regulator PI860_21210 PF00265 Thymidine kinase PI860_21215 PF03553 Na+/H+ antiporter family PI860_21225 PF00816 H-NS histone family PI860_21230 PF01923 Cobalamin adenosyltransferase PI860_21235 PF12843 Putative quorum-sensing-regulated virulence factor PI860_21240 PF04055 Radical SAM superfamily PI860_21245 PF06508 Queuosine biosynthesis protein QueC PI860_21260 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PI860_21265 PF18073 Rubredoxin metal binding domain PI860_21275 PF00216 Bacterial DNA-binding protein PI860_21280 PF00575 S1 RNA binding domain PI860_21285 PF02224 Cytidylate kinase PI860_21290 PF00925 GTP cyclohydrolase II PI860_21295 PF03466 LysR substrate binding domain PI860_21295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_21300 PF03466 LysR substrate binding domain PI860_21300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_21305 PF07690 Major Facilitator Superfamily PI860_21320 PF00881 Nitroreductase family PI860_21325 PF00563 EAL domain PI860_21325 PF00990 Diguanylate cyclase, GGDEF domain PI860_21325 PF03707 Bacterial signalling protein N terminal repeat PI860_21330 PF13358 DDE superfamily endonuclease PI860_21330 PF13592 Winged helix-turn helix PI860_21340 PF03466 LysR substrate binding domain PI860_21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_21345 PF00072 Response regulator receiver domain PI860_21355 PF01212 Beta-eliminating lyase PI860_21360 PF00106 short chain dehydrogenase PI860_21370 PF00248 Aldo/keto reductase family PI860_21375 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PI860_21385 PF00005 ABC transporter PI860_21390 PF00528 Binding-protein-dependent transport system inner membrane component PI860_21395 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_21400 PF00528 Binding-protein-dependent transport system inner membrane component PI860_21405 PF03411 Penicillin-insensitive murein endopeptidase PI860_21415 PF04536 TPM domain PI860_21430 PF01618 MotA/TolQ/ExbB proton channel family PI860_21435 PF00691 OmpA family PI860_21435 PF13677 Membrane MotB of proton-channel complex MotA/MotB PI860_21440 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PI860_21445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PI860_21450 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PI860_21450 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PI860_21460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PI860_21460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PI860_21465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PI860_21465 PF00384 Molybdopterin oxidoreductase PI860_21465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PI860_21470 PF00146 NADH dehydrogenase PI860_21475 PF12838 4Fe-4S dicluster domain PI860_21480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PI860_21485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PI860_21490 PF00361 Proton-conducting membrane transporter PI860_21490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PI860_21495 PF00361 Proton-conducting membrane transporter PI860_21500 PF00361 Proton-conducting membrane transporter PI860_21515 PF13426 PAS domain PI860_21515 PF08447 PAS fold PI860_21515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_21520 PF02355 Protein export membrane protein PI860_21520 PF07549 SecD/SecF GG Motif PI860_21525 PF07549 SecD/SecF GG Motif PI860_21525 PF13721 SecD export protein N-terminal TM region PI860_21525 PF02355 Protein export membrane protein PI860_21560 PF01230 HIT domain PI860_21565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI860_21565 PF00672 HAMP domain PI860_21575 PF01979 Amidohydrolase family PI860_21590 PF00375 Sodium:dicarboxylate symporter family PI860_21600 PF01168 Alanine racemase, N-terminal domain PI860_21600 PF00842 Alanine racemase, C-terminal domain PI860_21605 PF03741 Integral membrane protein TerC family PI860_21610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI860_21610 PF00005 ABC transporter PI860_21620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI860_21620 PF00005 ABC transporter PI860_21625 PF12911 N-terminal TM domain of oligopeptide transport permease C PI860_21625 PF00528 Binding-protein-dependent transport system inner membrane component PI860_21630 PF00528 Binding-protein-dependent transport system inner membrane component PI860_21635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI860_21640 PF01914 MarC family integral membrane protein PI860_21650 PF00171 Aldehyde dehydrogenase family PI860_21650 PF00465 Iron-containing alcohol dehydrogenase PI860_21655 PF11871 Domain of unknown function (DUF3391) PI860_21655 PF01966 HD domain PI860_21660 PF07694 5TMR of 5TMR-LYT PI860_21660 PF06580 Histidine kinase PI860_21665 PF04397 LytTr DNA-binding domain PI860_21665 PF00072 Response regulator receiver domain PI860_21670 PF02554 Carbon starvation protein CstA PI860_21675 PF11742 Protein of unknown function (DUF3302) PI860_21680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI860_21680 PF00529 HlyD membrane-fusion protein of T1SS PI860_21685 PF00271 Helicase conserved C-terminal domain PI860_21685 PF04851 Type III restriction enzyme, res subunit PI860_21690 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PI860_21695 PF00462 Glutaredoxin PI860_21705 PF00155 Aminotransferase class I and II PI860_21710 PF03606 C4-dicarboxylate anaerobic carrier PI860_21715 PF07055 Enoyl reductase FAD binding domain PI860_21715 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PI860_21715 PF12241 Trans-2-enoyl-CoA reductase catalytic region PI860_21795 PF00664 ABC transporter transmembrane region PI860_21795 PF00005 ABC transporter PI860_21795 PF03412 Peptidase C39 family PI860_21800 PF16199 Radical_SAM C-terminal domain PI860_21800 PF04055 Radical SAM superfamily PI860_21805 PF00310 Glutamine amidotransferases class-II PI860_21805 PF04898 Glutamate synthase central domain PI860_21805 PF01645 Conserved region in glutamate synthase PI860_21805 PF01493 GXGXG motif PI860_21810 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI860_21810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PI860_21825 PF00376 MerR family regulatory protein PI860_21825 PF09278 MerR, DNA binding PI860_21850 PF00271 Helicase conserved C-terminal domain PI860_21850 PF00270 DEAD/DEAH box helicase PI860_21855 PF13302 Acetyltransferase (GNAT) domain PI860_21870 PF08378 Nuclease-related domain PI860_21880 PF13592 Winged helix-turn helix PI860_21880 PF13358 DDE superfamily endonuclease PI860_21890 PF07759 Protein of unknown function (DUF1615) PI860_21895 PF00682 HMGL-like PI860_21895 PF08502 LeuA allosteric (dimerisation) domain PI860_21900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PI860_21900 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PI860_21900 PF02142 MGS-like domain PI860_21905 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PI860_21905 PF00117 Glutamine amidotransferase class-I PI860_21910 PF05173 Dihydrodipicolinate reductase, C-terminus PI860_21910 PF01113 Dihydrodipicolinate reductase, N-terminus PI860_21930 PF01812 5-formyltetrahydrofolate cyclo-ligase family PI860_21935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PI860_21940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI860_21940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI860_21940 PF01842 ACT domain PI860_21945 PF01219 Prokaryotic diacylglycerol kinase PI860_21950 PF00793 DAHP synthetase I family PI860_21955 PF00005 ABC transporter PI860_21960 PF01032 FecCD transport family PI860_21965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI860_21965 PF00512 His Kinase A (phospho-acceptor) domain PI860_21965 PF01627 Hpt domain PI860_21965 PF00989 PAS fold PI860_21965 PF00072 Response regulator receiver domain PI860_21965 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI860_21975 PF00437 Type II/IV secretion system protein PI860_21980 PF00483 Nucleotidyl transferase PI860_21995 PF07670 Nucleoside recognition PI860_21995 PF02421 Ferrous iron transport protein B PI860_21995 PF07664 Ferrous iron transport protein B C terminus PI860_22005 PF01253 Translation initiation factor SUI1 PI860_22010 PF01169 Uncharacterized protein family UPF0016 PI860_22060 PF13592 Winged helix-turn helix PI860_22060 PF13358 DDE superfamily endonuclease PI860_22065 PF09190 DALR domain PI860_22065 PF01406 tRNA synthetases class I (C) catalytic domain PI860_22070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PI860_22080 PF00149 Calcineurin-like phosphoesterase PI860_22100 PF03466 LysR substrate binding domain PI860_22100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI860_22110 PF02899 Phage integrase, N-terminal SAM-like domain PI860_22110 PF00589 Phage integrase family PI860_22120 PF00717 Peptidase S24-like PI860_22135 PF06892 Phage regulatory protein CII (CP76) PI860_22245 PF07178 TraL protein PI860_22250 PF05309 TraE protein PI860_22270 PF03743 Bacterial conjugation TrbI-like protein PI860_22275 PF03743 Bacterial conjugation TrbI-like protein PI860_22280 PF09676 Type IV conjugative transfer system lipoprotein (TraV) PI860_22285 PF09676 Type IV conjugative transfer system lipoprotein (TraV) PI860_22290 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer PI860_22300 PF12477 Sex factor F TraW protein N terminal PI860_22305 PF06834 TraU protein PI860_22310 PF09673 Type-F conjugative transfer system pilin assembly protein PI860_22320 PF06986 Type-1V conjugative transfer system mating pair stabilisation PI860_22330 PF13728 F plasmid transfer operon protein PI860_22335 PF06122 Conjugative relaxosome accessory transposon protein PI860_22340 PF07916 TraG-like protein, N-terminal region PI860_22350 PF05818 Enterobacterial TraT complement resistance protein PI860_22355 PF10412 Type IV secretion-system coupling protein DNA-binding domain PI860_22355 PF12615 F sex factor protein N terminal PI860_22360 PF07057 DNA helicase TraI PI860_22360 PF18340 DNA relaxase TraI 2B/2B-like domain PI860_22360 PF08751 TrwC relaxase PI860_22360 PF18272 single-stranded DNA binding TraI N-terminal subdomain PI860_22365 PF00872 Transposase, Mutator family PI860_22385 PF01548 Transposase PI860_22385 PF02371 Transposase IS116/IS110/IS902 family PI860_22395 PF02108 Flagellar assembly protein FliH PI860_22400 PF06578 YOP proteins translocation protein K (YscK) PI860_22405 PF01514 Secretory protein of YscJ/FliF family PI860_22410 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI PI860_22415 PF09025 YopR, type III needle-polymerisation regulator PI860_22420 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) PI860_22425 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF PI860_22435 PF16697 Inner membrane component of T3SS, cytoplasmic domain PI860_22435 PF16693 Inner membrane component of T3SS, periplasmic domain PI860_22440 PF00263 Bacterial type II and III secretion system protein PI860_22440 PF03958 Bacterial type II/III secretion system short domain PI860_22445 PF05932 Tir chaperone protein (CesT) family PI860_22455 PF12833 Helix-turn-helix domain PI860_22460 PF09619 Type III secretion system lipoprotein chaperone (YscW) PI860_22470 PF05932 Tir chaperone protein (CesT) family PI860_22475 PF05844 YopD protein PI860_22480 PF04888 Secretion system effector C (SseC) like family PI860_22485 PF07720 Tetratricopeptide repeat PI860_22490 PF04792 V antigen (LcrV) protein PI860_22495 PF07216 LcrG protein PI860_22500 PF09621 Type III secretion system regulator (LcrR) PI860_22505 PF00771 FHIPEP family PI860_22515 PF09474 Type III secretion system YscX (type_III_YscX) PI860_22525 PF09059 TyeA PI860_22530 PF07201 HrpJ-like domain PI860_22535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI860_22535 PF02874 ATP synthase alpha/beta family, beta-barrel domain PI860_22535 PF18269 T3SS EscN ATPase C-terminal domain PI860_22550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI860_22555 PF00813 FliP family PI860_22560 PF01313 Bacterial export proteins, family 3 PI860_22565 PF01311 Bacterial export proteins, family 1 PI860_22570 PF01312 FlhB HrpN YscU SpaS Family PI860_22580 PF03496 ADP-ribosyltransferase exoenzyme PI860_22600 PF00561 alpha/beta hydrolase fold PI860_22605 PF00872 Transposase, Mutator family PI860_22610 PF01695 IstB-like ATP binding protein PI860_22615 PF00665 Integrase core domain PI860_22620 PF13358 DDE superfamily endonuclease PI860_22620 PF13592 Winged helix-turn helix PI860_22645 PF01848 Hok/gef family PI860_22655 PF09632 Rac1-binding domain PI860_22655 PF00069 Protein kinase domain PI860_22670 PF02371 Transposase IS116/IS110/IS902 family PI860_22670 PF01548 Transposase PI860_22760 PF00589 Phage integrase family PI860_22775 PF13614 AAA domain PI860_22795 PF13700 Domain of unknown function (DUF4158) PI860_22795 PF01526 Tn3 transposase DDE domain PI860_22810 PF02796 Helix-turn-helix domain of resolvase PI860_22810 PF00239 Resolvase, N terminal domain PI860_22815 PF18340 DNA relaxase TraI 2B/2B-like domain PI860_22815 PF07057 DNA helicase TraI PI860_22815 PF18272 single-stranded DNA binding TraI N-terminal subdomain PI860_22815 PF08751 TrwC relaxase PI860_22825 PF01464 Transglycosylase SLT domain PI860_22840 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A PI860_22855 PF01555 DNA methylase PI860_22875 PF04002 RadC-like JAB domain PI860_22885 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PI860_22915 PF00665 Integrase core domain PI860_22920 PF01695 IstB-like ATP binding protein PI860_22925 PF01848 Hok/gef family PI860_22945 PF08019 Phosphoethanolamine transferase EptA/EptB PI860_22945 PF00884 Sulfatase PI860_22950 PF00884 Sulfatase PI860_22950 PF08019 Phosphoethanolamine transferase EptA/EptB PI860_22960 PF02796 Helix-turn-helix domain of resolvase PI860_22960 PF00239 Resolvase, N terminal domain PI860_22965 PF13614 AAA domain PI860_22995 PF00816 H-NS histone family PI860_23005 PF13614 AAA domain PI860_23015 PF00872 Transposase, Mutator family PI860_23030 PF09013 YopH, N-terminal PI860_23030 PF00102 Protein-tyrosine phosphatase PI860_23040 PF13358 DDE superfamily endonuclease PI860_23040 PF13592 Winged helix-turn helix PI860_23045 PF01906 Putative heavy-metal-binding PI860_23070 PF01695 IstB-like ATP binding protein PI860_23075 PF00665 Integrase core domain PI860_23100 PF00816 H-NS histone family PI860_23115 PF13614 AAA domain PI860_23140 PF05513 TraA PI860_23145 PF07178 TraL protein PI860_23150 PF05309 TraE protein PI860_23160 PF03743 Bacterial conjugation TrbI-like protein PI860_23165 PF09676 Type IV conjugative transfer system lipoprotein (TraV) PI860_23170 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer PI860_23180 PF12477 Sex factor F TraW protein N terminal PI860_23185 PF06834 TraU protein PI860_23190 PF09673 Type-F conjugative transfer system pilin assembly protein PI860_23200 PF06986 Type-1V conjugative transfer system mating pair stabilisation PI860_23225 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PI860_23230 PF04221 RelB antitoxin PI860_23290 PF04837 MbeB-like, N-term conserved region PI860_23350 PF03421 YopJ Serine/Threonine acetyltransferase PI860_23355 PF00872 Transposase, Mutator family