locus-tag class description PI861_00080 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system PI861_00100 PF01066 CDP-alcohol phosphatidyltransferase PI861_00105 PF01541 GIY-YIG catalytic domain PI861_00105 PF02151 UvrB/uvrC motif PI861_00105 PF08459 UvrC Helix-hairpin-helix N-terminal PI861_00110 PF00196 Bacterial regulatory proteins, luxR family PI861_00110 PF00072 Response regulator receiver domain PI861_00115 PF02348 Cytidylyltransferase PI861_00120 PF03966 Trm112p-like protein PI861_00125 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PI861_00130 PF00664 ABC transporter transmembrane region PI861_00130 PF00005 ABC transporter PI861_00135 PF03772 Competence protein PI861_00135 PF00753 Metallo-beta-lactamase superfamily PI861_00150 PF05872 Bacterial protein of unknown function (DUF853) PI861_00155 PF00155 Aminotransferase class I and II PI861_00165 PF13609 Gram-negative porin PI861_00170 PF06733 DEAD_2 PI861_00170 PF13307 Helicase C-terminal domain PI861_00180 PF00850 Histone deacetylase domain PI861_00185 PF01926 50S ribosome-binding GTPase PI861_00190 PF00245 Alkaline phosphatase PI861_00195 PF00245 Alkaline phosphatase PI861_00210 PF01272 Transcription elongation factor, GreA/GreB, C-term PI861_00210 PF14760 Rnk N-terminus PI861_00215 PF00196 Bacterial regulatory proteins, luxR family PI861_00215 PF00072 Response regulator receiver domain PI861_00220 PF05231 MASE1 PI861_00220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_00220 PF07730 Histidine kinase PI861_00225 PF07690 Major Facilitator Superfamily PI861_00230 PF08448 PAS fold PI861_00230 PF00990 Diguanylate cyclase, GGDEF domain PI861_00235 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_00240 PF00528 Binding-protein-dependent transport system inner membrane component PI861_00245 PF00005 ABC transporter PI861_00250 PF04116 Fatty acid hydroxylase superfamily PI861_00255 PF13520 Amino acid permease PI861_00270 PF00571 CBS domain PI861_00270 PF03471 Transporter associated domain PI861_00270 PF01595 Cyclin M transmembrane N-terminal domain PI861_00275 PF01895 PhoU domain PI861_00280 PF00005 ABC transporter PI861_00285 PF00528 Binding-protein-dependent transport system inner membrane component PI861_00290 PF00528 Binding-protein-dependent transport system inner membrane component PI861_00295 PF14437 MafB19-like deaminase PI861_00310 PF01274 Malate synthase PI861_00315 PF00463 Isocitrate lyase family PI861_00320 PF00308 Bacterial dnaA protein PI861_00335 PF02769 AIR synthase related protein, C-terminal domain PI861_00335 PF00586 AIR synthase related protein, N-terminal domain PI861_00340 PF00551 Formyl transferase PI861_00345 PF01784 NIF3 (NGG1p interacting factor 3) PI861_00350 PF02954 Bacterial regulatory protein, Fis family PI861_00350 PF00072 Response regulator receiver domain PI861_00350 PF00158 Sigma-54 interaction domain PI861_00355 PF13188 PAS domain PI861_00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_00355 PF00512 His Kinase A (phospho-acceptor) domain PI861_00375 PF13089 Polyphosphate kinase N-terminal domain PI861_00375 PF17941 Polyphosphate kinase C-terminal domain 1 PI861_00375 PF13090 Polyphosphate kinase C-terminal domain 2 PI861_00375 PF02503 Polyphosphate kinase middle domain PI861_00380 PF02541 Ppx/GppA phosphatase family PI861_00385 PF03448 MgtE intracellular N domain PI861_00385 PF00571 CBS domain PI861_00385 PF01769 Divalent cation transporter PI861_00400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PI861_00400 PF10135 Rod binding protein PI861_00405 PF02119 Flagellar P-ring protein PI861_00410 PF02107 Flagellar L-ring protein PI861_00415 PF00460 Flagella basal body rod protein PI861_00415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_00420 PF00460 Flagella basal body rod protein PI861_00420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_00425 PF00460 Flagella basal body rod protein PI861_00425 PF07559 Flagellar basal body protein FlaE PI861_00425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_00435 PF00460 Flagella basal body rod protein PI861_00435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_00440 PF00460 Flagella basal body rod protein PI861_00450 PF03705 CheR methyltransferase, all-alpha domain PI861_00450 PF01739 CheR methyltransferase, SAM binding domain PI861_00455 PF00072 Response regulator receiver domain PI861_00455 PF01584 CheW-like domain PI861_00475 PF12850 Calcineurin-like phosphoesterase superfamily domain PI861_00480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_00490 PF01479 S4 domain PI861_00490 PF00849 RNA pseudouridylate synthase PI861_00495 PF01966 HD domain PI861_00495 PF11871 Domain of unknown function (DUF3391) PI861_00535 PF00313 'Cold-shock' DNA-binding domain PI861_00540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PI861_00540 PF00364 Biotin-requiring enzyme PI861_00540 PF02817 e3 binding domain PI861_00545 PF13358 DDE superfamily endonuclease PI861_00545 PF13592 Winged helix-turn helix PI861_00550 PF02779 Transketolase, pyrimidine binding domain PI861_00550 PF02780 Transketolase, C-terminal domain PI861_00555 PF00676 Dehydrogenase E1 component PI861_00560 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PI861_00575 PF01695 IstB-like ATP binding protein PI861_00580 PF00665 Integrase core domain PI861_00590 PF04434 SWIM zinc finger PI861_00590 PF00176 SNF2 family N-terminal domain PI861_00590 PF00271 Helicase conserved C-terminal domain PI861_00595 PF04337 Protein of unknown function, DUF480 PI861_00605 PF02397 Bacterial sugar transferase PI861_00620 PF00534 Glycosyl transferases group 1 PI861_00620 PF13439 Glycosyltransferase Family 4 PI861_00635 PF00535 Glycosyl transferase family 2 PI861_00650 PF02719 Polysaccharide biosynthesis protein PI861_00655 PF00953 Glycosyl transferase family 4 PI861_00660 PF01370 NAD dependent epimerase/dehydratase family PI861_00670 PF02080 TrkA-C domain PI861_00670 PF03600 Citrate transporter PI861_00675 PF02080 TrkA-C domain PI861_00675 PF03600 Citrate transporter PI861_00695 PF02350 UDP-N-acetylglucosamine 2-epimerase PI861_00710 PF00005 ABC transporter PI861_00720 PF00263 Bacterial type II and III secretion system protein PI861_00720 PF03958 Bacterial type II/III secretion system short domain PI861_00760 PF07963 Prokaryotic N-terminal methylation motif PI861_00760 PF08334 Type II secretion system (T2SS), protein G PI861_00765 PF00482 Type II secretion system (T2SS), protein F PI861_00770 PF00437 Type II/IV secretion system protein PI861_00770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PI861_00780 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PI861_00785 PF00483 Nucleotidyl transferase PI861_00790 PF04321 RmlD substrate binding domain PI861_00795 PF16363 GDP-mannose 4,6 dehydratase PI861_00800 PF13592 Winged helix-turn helix PI861_00800 PF13358 DDE superfamily endonuclease PI861_00805 PF02321 Outer membrane efflux protein PI861_00810 PF00873 AcrB/AcrD/AcrF family PI861_00815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_00815 PF00529 HlyD membrane-fusion protein of T1SS PI861_00820 PF00440 Bacterial regulatory proteins, tetR family PI861_00820 PF08361 MAATS-type transcriptional repressor, C-terminal region PI861_00845 PF01479 S4 domain PI861_00845 PF00849 RNA pseudouridylate synthase PI861_00850 PF04079 Segregation and condensation complex subunit ScpB PI861_00855 PF02616 Segregation and condensation protein ScpA PI861_00860 PF01300 Telomere recombination PI861_00865 PF02811 PHP domain PI861_00870 PF04715 Anthranilate synthase component I, N terminal region PI861_00870 PF00425 chorismate binding enzyme PI861_00875 PF02885 Glycosyl transferase family, helical bundle domain PI861_00875 PF00117 Glutamine amidotransferase class-I PI861_00875 PF00591 Glycosyl transferase family, a/b domain PI861_00880 PF02885 Glycosyl transferase family, helical bundle domain PI861_00880 PF00591 Glycosyl transferase family, a/b domain PI861_00885 PF00218 Indole-3-glycerol phosphate synthase PI861_00885 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PI861_00890 PF00291 Pyridoxal-phosphate dependent enzyme PI861_00895 PF00290 Tryptophan synthase alpha chain PI861_00905 PF13592 Winged helix-turn helix PI861_00905 PF13358 DDE superfamily endonuclease PI861_00920 PF02378 Phosphotransferase system, EIIC PI861_00920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI861_00920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI861_00925 PF07690 Major Facilitator Superfamily PI861_00930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI861_00940 PF00849 RNA pseudouridylate synthase PI861_00945 PF00293 NUDIX domain PI861_00955 PF04356 Protein of unknown function (DUF489) PI861_00960 PF08328 Adenylosuccinate lyase C-terminal PI861_00960 PF00206 Lyase PI861_00965 PF08007 Cupin superfamily protein PI861_00975 PF13592 Winged helix-turn helix PI861_00975 PF13358 DDE superfamily endonuclease PI861_00985 PF13508 Acetyltransferase (GNAT) domain PI861_01005 PF01243 Pyridoxamine 5'-phosphate oxidase PI861_01005 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PI861_01020 PF01189 16S rRNA methyltransferase RsmB/F PI861_01020 PF01029 NusB family PI861_01025 PF00462 Glutaredoxin PI861_01030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PI861_01030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PI861_01035 PF04333 MlaA lipoprotein PI861_01045 PF03918 Cytochrome C biogenesis protein PI861_01050 PF08534 Redoxin PI861_01055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PI861_01055 PF01578 Cytochrome C assembly protein PI861_01060 PF03100 CcmE PI861_01065 PF04995 Heme exporter protein D (CcmD) PI861_01070 PF01578 Cytochrome C assembly protein PI861_01075 PF03379 CcmB protein PI861_01080 PF00005 ABC transporter PI861_01095 PF01584 CheW-like domain PI861_01105 PF13614 AAA domain PI861_01110 PF00691 OmpA family PI861_01110 PF13677 Membrane MotB of proton-channel complex MotA/MotB PI861_01115 PF01618 MotA/TolQ/ExbB proton channel family PI861_01120 PF00072 Response regulator receiver domain PI861_01120 PF01339 CheB methylesterase PI861_01125 PF01627 Hpt domain PI861_01125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_01125 PF02895 Signal transducing histidine kinase, homodimeric domain PI861_01125 PF01584 CheW-like domain PI861_01125 PF00072 Response regulator receiver domain PI861_01130 PF04344 Chemotaxis phosphatase, CheZ PI861_01135 PF00072 Response regulator receiver domain PI861_01140 PF04539 Sigma-70 region 3 PI861_01140 PF04545 Sigma-70, region 4 PI861_01140 PF04542 Sigma-70 region 2 PI861_01145 PF10609 NUBPL iron-transfer P-loop NTPase PI861_01150 PF00448 SRP54-type protein, GTPase domain PI861_01155 PF00771 FHIPEP family PI861_01160 PF01312 FlhB HrpN YscU SpaS Family PI861_01165 PF01311 Bacterial export proteins, family 1 PI861_01170 PF01313 Bacterial export proteins, family 3 PI861_01175 PF00813 FliP family PI861_01180 PF04347 Flagellar biosynthesis protein, FliO PI861_01185 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI861_01190 PF02154 Flagellar motor switch protein FliM PI861_01190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI861_01210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI861_01210 PF18269 T3SS EscN ATPase C-terminal domain PI861_01220 PF01706 FliG C-terminal domain PI861_01220 PF14841 FliG middle domain PI861_01220 PF14842 FliG N-terminal domain PI861_01225 PF01514 Secretory protein of YscJ/FliF family PI861_01225 PF08345 Flagellar M-ring protein C-terminal PI861_01230 PF02049 Flagellar hook-basal body complex protein FliE PI861_01240 PF07969 Amidohydrolase family PI861_01255 PF02001 Protein of unknown function DUF134 PI861_01270 PF00072 Response regulator receiver domain PI861_01275 PF04055 Radical SAM superfamily PI861_01275 PF18693 TRAM domain PI861_01275 PF00919 Uncharacterized protein family UPF0004 PI861_01285 PF00072 Response regulator receiver domain PI861_01285 PF00486 Transcriptional regulatory protein, C terminal PI861_01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_01295 PF02685 Glucokinase PI861_01300 PF01418 Helix-turn-helix domain, rpiR family PI861_01300 PF01380 SIS domain PI861_01305 PF00224 Pyruvate kinase, barrel domain PI861_01305 PF02887 Pyruvate kinase, alpha/beta domain PI861_01315 PF00873 AcrB/AcrD/AcrF family PI861_01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PI861_01320 PF02770 Acyl-CoA dehydrogenase, middle domain PI861_01320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PI861_01320 PF09317 Domain of unknown function (DUF1974) PI861_01325 PF00440 Bacterial regulatory proteins, tetR family PI861_01365 PF03527 RHS protein PI861_01365 PF05593 RHS Repeat PI861_01375 PF01695 IstB-like ATP binding protein PI861_01380 PF00665 Integrase core domain PI861_01395 PF13592 Winged helix-turn helix PI861_01395 PF13358 DDE superfamily endonuclease PI861_01400 PF14130 Domain of unknown function (DUF4297) PI861_01400 PF08878 Domain of unknown function (DUF1837) PI861_01410 PF17969 L,D-transpeptidase C-terminal domain PI861_01410 PF01476 LysM domain PI861_01410 PF03734 L,D-transpeptidase catalytic domain PI861_01420 PF01575 MaoC like domain PI861_01425 PF05971 RNA methyltransferase PI861_01430 PF00877 NlpC/P60 family PI861_01435 PF01648 4'-phosphopantetheinyl transferase superfamily PI861_01450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PI861_01455 PF01842 ACT domain PI861_01455 PF00551 Formyl transferase PI861_01465 PF13091 PLD-like domain PI861_01465 PF13396 Phospholipase_D-nuclease N-terminal PI861_01480 PF01551 Peptidase family M23 PI861_01485 PF00128 Alpha amylase, catalytic domain PI861_01490 PF01464 Transglycosylase SLT domain PI861_01490 PF01551 Peptidase family M23 PI861_01490 PF10145 Phage-related minor tail protein PI861_01495 PF00230 Major intrinsic protein PI861_01500 PF02075 Crossover junction endodeoxyribonuclease RuvC PI861_01505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PI861_01535 PF11842 Domain of unknown function (DUF3362) PI861_01535 PF04055 Radical SAM superfamily PI861_01535 PF08497 Radical SAM N-terminal PI861_01545 PF00873 AcrB/AcrD/AcrF family PI861_01550 PF13533 Biotin-lipoyl like PI861_01555 PF00990 Diguanylate cyclase, GGDEF domain PI861_01555 PF05230 MASE2 domain PI861_01560 PF01734 Patatin-like phospholipase PI861_01565 PF00209 Sodium:neurotransmitter symporter family PI861_01580 PF00691 OmpA family PI861_01580 PF01389 OmpA-like transmembrane domain PI861_01585 PF00691 OmpA family PI861_01585 PF01389 OmpA-like transmembrane domain PI861_01590 PF00691 OmpA family PI861_01590 PF01389 OmpA-like transmembrane domain PI861_01595 PF00390 Malic enzyme, N-terminal domain PI861_01595 PF03949 Malic enzyme, NAD binding domain PI861_01600 PF12833 Helix-turn-helix domain PI861_01605 PF01554 MatE PI861_01610 PF10692 Protein of unknown function (DUF2498) PI861_01615 PF00990 Diguanylate cyclase, GGDEF domain PI861_01615 PF00072 Response regulator receiver domain PI861_01620 PF00860 Permease family PI861_01630 PF01235 Sodium:alanine symporter family PI861_01635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PI861_01635 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PI861_01640 PF01699 Sodium/calcium exchanger protein PI861_01645 PF08534 Redoxin PI861_01645 PF00462 Glutaredoxin PI861_01655 PF00293 NUDIX domain PI861_01675 PF00005 ABC transporter PI861_01680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI861_01680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PI861_01685 PF03932 CutC family PI861_01690 PF00480 ROK family PI861_01700 PF01435 Peptidase family M48 PI861_01705 PF12849 PBP superfamily domain PI861_01710 PF11808 Phosphate regulon sensor protein PhoR PI861_01710 PF00989 PAS fold PI861_01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_01710 PF00512 His Kinase A (phospho-acceptor) domain PI861_01715 PF00072 Response regulator receiver domain PI861_01715 PF00486 Transcriptional regulatory protein, C terminal PI861_01720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI861_01725 PF07694 5TMR of 5TMR-LYT PI861_01725 PF00990 Diguanylate cyclase, GGDEF domain PI861_01750 PF12431 Transcriptional regulator PI861_01750 PF00072 Response regulator receiver domain PI861_01755 PF17203 Single cache domain 3 PI861_01755 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PI861_01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_01755 PF00989 PAS fold PI861_01760 PF00390 Malic enzyme, N-terminal domain PI861_01760 PF03949 Malic enzyme, NAD binding domain PI861_01775 PF01047 MarR family PI861_01780 PF00529 HlyD membrane-fusion protein of T1SS PI861_01780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_01815 PF03477 ATP cone domain PI861_01815 PF13597 Anaerobic ribonucleoside-triphosphate reductase PI861_01825 PF00533 BRCA1 C Terminus (BRCT) domain PI861_01825 PF01653 NAD-dependent DNA ligase adenylation domain PI861_01825 PF03120 NAD-dependent DNA ligase OB-fold domain PI861_01825 PF12826 Helix-hairpin-helix motif PI861_01825 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PI861_01830 PF04354 ZipA, C-terminal FtsZ-binding domain PI861_01835 PF06470 SMC proteins Flexible Hinge Domain PI861_01835 PF02463 RecF/RecN/SMC N terminal domain PI861_01845 PF03458 UPF0126 domain PI861_01855 PF05951 Bacterial protein of unknown function (DUF882) PI861_01860 PF01471 Putative peptidoglycan binding domain PI861_01860 PF03734 L,D-transpeptidase catalytic domain PI861_01875 PF00535 Glycosyl transferase family 2 PI861_01890 PF00579 tRNA synthetases class I (W and Y) PI861_01895 PF01551 Peptidase family M23 PI861_01895 PF01476 LysM domain PI861_01895 PF08525 Opacity-associated protein A N-terminal motif PI861_01900 PF03702 Anhydro-N-acetylmuramic acid kinase PI861_01905 PF01042 Endoribonuclease L-PSP PI861_01915 PF00456 Transketolase, thiamine diphosphate binding domain PI861_01915 PF02779 Transketolase, pyrimidine binding domain PI861_01915 PF02780 Transketolase, C-terminal domain PI861_01920 PF02773 S-adenosylmethionine synthetase, C-terminal domain PI861_01920 PF02772 S-adenosylmethionine synthetase, central domain PI861_01920 PF00438 S-adenosylmethionine synthetase, N-terminal domain PI861_01925 PF10263 SprT-like family PI861_01925 PF17283 SprT-like zinc ribbon domain PI861_01930 PF04231 Endonuclease I PI861_01935 PF04452 RNA methyltransferase PI861_01940 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PI861_01940 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PI861_01945 PF00672 HAMP domain PI861_01945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_01950 PF12729 Four helix bundle sensory module for signal transduction PI861_01950 PF00672 HAMP domain PI861_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_01955 PF02622 Uncharacterized ACR, COG1678 PI861_01960 PF03652 Holliday junction resolvase PI861_01965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_01965 PF03466 LysR substrate binding domain PI861_01970 PF07690 Major Facilitator Superfamily PI861_01975 PF00144 Beta-lactamase PI861_01980 PF07726 ATPase family associated with various cellular activities (AAA) PI861_01980 PF17863 AAA lid domain PI861_01990 PF13559 Domain of unknown function (DUF4129) PI861_01990 PF01841 Transglutaminase-like superfamily PI861_01990 PF11992 Domain of unknown function (DUF3488) PI861_01995 PF01235 Sodium:alanine symporter family PI861_02000 PF00923 Transaldolase/Fructose-6-phosphate aldolase PI861_02015 PF03167 Uracil DNA glycosylase superfamily PI861_02025 PF13592 Winged helix-turn helix PI861_02025 PF13358 DDE superfamily endonuclease PI861_02030 PF01228 Glycine radical PI861_02035 PF00375 Sodium:dicarboxylate symporter family PI861_02040 PF00793 DAHP synthetase I family PI861_02060 PF03462 PCRF domain PI861_02060 PF00472 RF-1 domain PI861_02065 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PI861_02065 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PI861_02065 PF01488 Shikimate / quinate 5-dehydrogenase PI861_02070 PF03550 Outer membrane lipoprotein LolB PI861_02075 PF08544 GHMP kinases C terminal PI861_02075 PF00288 GHMP kinases N terminal domain PI861_02085 PF14572 Phosphoribosyl synthetase-associated domain PI861_02085 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PI861_02090 PF02872 5'-nucleotidase, C-terminal domain PI861_02090 PF00149 Calcineurin-like phosphoesterase PI861_02095 PF01195 Peptidyl-tRNA hydrolase PI861_02100 PF01926 50S ribosome-binding GTPase PI861_02100 PF06071 Protein of unknown function (DUF933) PI861_02165 PF02080 TrkA-C domain PI861_02165 PF03600 Citrate transporter PI861_02170 PF04973 Nicotinamide mononucleotide transporter PI861_02175 PF01048 Phosphorylase superfamily PI861_02185 PF04266 ASCH domain PI861_02190 PF07859 alpha/beta hydrolase fold PI861_02205 PF00012 Hsp70 protein PI861_02215 PF16657 Maltogenic Amylase, C-terminal domain PI861_02215 PF00128 Alpha amylase, catalytic domain PI861_02225 PF00005 ABC transporter PI861_02225 PF12848 ABC transporter PI861_02230 PF07690 Major Facilitator Superfamily PI861_02235 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PI861_02235 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PI861_02235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PI861_02235 PF10371 Domain of unknown function PI861_02235 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PI861_02240 PF07690 Major Facilitator Superfamily PI861_02245 PF13419 Haloacid dehalogenase-like hydrolase PI861_02255 PF00171 Aldehyde dehydrogenase family PI861_02260 PF04958 Arginine N-succinyltransferase beta subunit PI861_02265 PF00202 Aminotransferase class-III PI861_02270 PF00117 Glutamine amidotransferase class-I PI861_02280 PF00579 tRNA synthetases class I (W and Y) PI861_02285 PF13419 Haloacid dehalogenase-like hydrolase PI861_02290 PF00834 Ribulose-phosphate 3 epimerase family PI861_02295 PF02086 D12 class N6 adenine-specific DNA methyltransferase PI861_02305 PF01761 3-dehydroquinate synthase PI861_02310 PF01202 Shikimate kinase PI861_02315 PF07660 Secretin and TonB N terminus short domain PI861_02315 PF00263 Bacterial type II and III secretion system protein PI861_02315 PF11741 AMIN domain PI861_02315 PF03958 Bacterial type II/III secretion system short domain PI861_02335 PF11104 Type IV pilus assembly protein PilM; PI861_02340 PF17092 Penicillin-binding protein OB-like domain PI861_02340 PF00912 Transglycosylase PI861_02340 PF00905 Penicillin binding protein transpeptidase domain PI861_02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_02345 PF03466 LysR substrate binding domain PI861_02365 PF03466 LysR substrate binding domain PI861_02365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_02380 PF01551 Peptidase family M23 PI861_02380 PF08525 Opacity-associated protein A N-terminal motif PI861_02380 PF01476 LysM domain PI861_02390 PF13592 Winged helix-turn helix PI861_02390 PF13358 DDE superfamily endonuclease PI861_02395 PF12795 Mechanosensitive ion channel porin domain PI861_02395 PF00924 Mechanosensitive ion channel PI861_02395 PF12794 Mechanosensitive ion channel inner membrane domain 1 PI861_02400 PF03009 Glycerophosphoryl diester phosphodiesterase family PI861_02405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_02405 PF02743 Cache domain PI861_02405 PF00672 HAMP domain PI861_02410 PF02910 Fumarate reductase flavoprotein C-term PI861_02410 PF00890 FAD binding domain PI861_02415 PF13183 4Fe-4S dicluster domain PI861_02415 PF13085 2Fe-2S iron-sulfur cluster binding domain PI861_02420 PF02300 Fumarate reductase subunit C PI861_02425 PF02313 Fumarate reductase subunit D PI861_02445 PF06224 Winged helix DNA-binding domain PI861_02460 PF00501 AMP-binding enzyme PI861_02480 PF00486 Transcriptional regulatory protein, C terminal PI861_02480 PF00072 Response regulator receiver domain PI861_02485 PF00512 His Kinase A (phospho-acceptor) domain PI861_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_02485 PF08521 Two-component sensor kinase N-terminal PI861_02495 PF00478 IMP dehydrogenase / GMP reductase domain PI861_02505 PF08207 Elongation factor P (EF-P) KOW-like domain PI861_02505 PF09285 Elongation factor P, C-terminal PI861_02505 PF01132 Elongation factor P (EF-P) OB domain PI861_02515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI861_02515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI861_02535 PF13419 Haloacid dehalogenase-like hydrolase PI861_02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_02545 PF03466 LysR substrate binding domain PI861_02550 PF05230 MASE2 domain PI861_02550 PF00990 Diguanylate cyclase, GGDEF domain PI861_02555 PF00313 'Cold-shock' DNA-binding domain PI861_02560 PF01494 FAD binding domain PI861_02565 PF04055 Radical SAM superfamily PI861_02565 PF01938 TRAM domain PI861_02565 PF00919 Uncharacterized protein family UPF0004 PI861_02570 PF02562 PhoH-like protein PI861_02575 PF02130 Uncharacterized protein family UPF0054 PI861_02580 PF00571 CBS domain PI861_02580 PF03471 Transporter associated domain PI861_02585 PF00795 Carbon-nitrogen hydrolase PI861_02590 PF07295 Zinc-ribbon containing domain PI861_02595 PF08264 Anticodon-binding domain of tRNA PI861_02595 PF00133 tRNA synthetases class I (I, L, M and V) PI861_02595 PF13603 Leucyl-tRNA synthetase, Domain 2 PI861_02615 PF01467 Cytidylyltransferase-like PI861_02625 PF02590 Predicted SPOUT methyltransferase PI861_02630 PF00905 Penicillin binding protein transpeptidase domain PI861_02630 PF03717 Penicillin-binding Protein dimerisation domain PI861_02635 PF01098 Cell cycle protein PI861_02645 PF05036 Sporulation related domain PI861_02645 PF03330 Lytic transglycolase PI861_02650 PF07943 Penicillin-binding protein 5, C-terminal domain PI861_02650 PF00768 D-alanyl-D-alanine carboxypeptidase PI861_02655 PF04359 Protein of unknown function (DUF493) PI861_02660 PF03099 Biotin/lipoate A/B protein ligase family PI861_02665 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PI861_02665 PF04055 Radical SAM superfamily PI861_02680 PF01734 Patatin-like phospholipase PI861_02710 PF01695 IstB-like ATP binding protein PI861_02715 PF00665 Integrase core domain PI861_02730 PF00665 Integrase core domain PI861_02750 PF13302 Acetyltransferase (GNAT) domain PI861_02755 PF06821 Serine hydrolase PI861_02760 PF02508 Rnf-Nqr subunit, membrane protein PI861_02770 PF17768 RecJ OB domain PI861_02770 PF02272 DHHA1 domain PI861_02770 PF01368 DHH family PI861_02780 PF01741 Large-conductance mechanosensitive channel, MscL PI861_02785 PF00990 Diguanylate cyclase, GGDEF domain PI861_02790 PF02899 Phage integrase, N-terminal SAM-like domain PI861_02790 PF00589 Phage integrase family PI861_02795 PF00258 Flavodoxin PI861_02800 PF01523 Putative modulator of DNA gyrase PI861_02805 PF01523 Putative modulator of DNA gyrase PI861_02815 PF17969 L,D-transpeptidase C-terminal domain PI861_02815 PF03734 L,D-transpeptidase catalytic domain PI861_02820 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase PI861_02825 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PI861_02835 PF13358 DDE superfamily endonuclease PI861_02835 PF13592 Winged helix-turn helix PI861_02850 PF03575 Peptidase family S51 PI861_02860 PF06476 Protein of unknown function (DUF1090) PI861_02865 PF02635 DsrE/DsrF-like family PI861_02870 PF00990 Diguanylate cyclase, GGDEF domain PI861_02880 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PI861_02880 PF00013 KH domain PI861_02880 PF01138 3' exoribonuclease family, domain 1 PI861_02880 PF03725 3' exoribonuclease family, domain 2 PI861_02880 PF00575 S1 RNA binding domain PI861_02885 PF00312 Ribosomal protein S15 PI861_02890 PF16198 tRNA pseudouridylate synthase B C-terminal domain PI861_02890 PF01509 TruB family pseudouridylate synthase (N terminal domain) PI861_02890 PF09157 Pseudouridine synthase II TruB, C-terminal PI861_02895 PF02033 Ribosome-binding factor A PI861_02900 PF04760 Translation initiation factor IF-2, N-terminal region PI861_02900 PF08364 Bacterial translation initiation factor IF-2 associated region PI861_02900 PF11987 Translation-initiation factor 2 PI861_02900 PF00009 Elongation factor Tu GTP binding domain PI861_02905 PF13184 NusA-like KH domain PI861_02905 PF00575 S1 RNA binding domain PI861_02905 PF08529 NusA N-terminal domain PI861_02910 PF17384 RimP C-terminal SH3 domain PI861_02910 PF02576 RimP N-terminal domain PI861_02925 PF03840 Preprotein translocase SecG subunit PI861_02930 PF00121 Triosephosphate isomerase PI861_02935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PI861_02935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PI861_02935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PI861_02935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PI861_02940 PF00809 Pterin binding enzyme PI861_02945 PF06480 FtsH Extracellular PI861_02945 PF17862 AAA+ lid domain PI861_02945 PF00004 ATPase family associated with various cellular activities (AAA) PI861_02945 PF01434 Peptidase family M41 PI861_02950 PF01728 FtsJ-like methyltransferase PI861_02955 PF01985 CRS1 / YhbY (CRM) domain PI861_02965 PF01272 Transcription elongation factor, GreA/GreB, C-term PI861_02965 PF03449 Transcription elongation factor, N-terminal PI861_02985 PF13677 Membrane MotB of proton-channel complex MotA/MotB PI861_02985 PF00691 OmpA family PI861_02990 PF01618 MotA/TolQ/ExbB proton channel family PI861_02995 PF02609 Exonuclease VII small subunit PI861_03000 PF00348 Polyprenyl synthetase PI861_03005 PF02779 Transketolase, pyrimidine binding domain PI861_03005 PF02780 Transketolase, C-terminal domain PI861_03005 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PI861_03010 PF00528 Binding-protein-dependent transport system inner membrane component PI861_03010 PF12911 N-terminal TM domain of oligopeptide transport permease C PI861_03015 PF00528 Binding-protein-dependent transport system inner membrane component PI861_03020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_03025 PF00005 ABC transporter PI861_03025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI861_03030 PF04608 Phosphatidylglycerophosphatase A PI861_03035 PF02769 AIR synthase related protein, C-terminal domain PI861_03035 PF00586 AIR synthase related protein, N-terminal domain PI861_03040 PF01029 NusB family PI861_03045 PF00885 6,7-dimethyl-8-ribityllumazine synthase PI861_03050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PI861_03050 PF00925 GTP cyclohydrolase II PI861_03055 PF00677 Lumazine binding domain PI861_03060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PI861_03060 PF01872 RibD C-terminal domain PI861_03065 PF03477 ATP cone domain PI861_03080 PF00464 Serine hydroxymethyltransferase PI861_03095 PF02613 Nitrate reductase delta subunit PI861_03115 PF00563 EAL domain PI861_03115 PF00990 Diguanylate cyclase, GGDEF domain PI861_03115 PF03707 Bacterial signalling protein N terminal repeat PI861_03125 PF13193 AMP-binding enzyme C-terminal domain PI861_03125 PF16177 Acetyl-coenzyme A synthetase N-terminus PI861_03125 PF00501 AMP-binding enzyme PI861_03130 PF01220 Dehydroquinase class II PI861_03135 PF00364 Biotin-requiring enzyme PI861_03140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PI861_03140 PF02785 Biotin carboxylase C-terminal domain PI861_03140 PF00289 Biotin carboxylase, N-terminal domain PI861_03145 PF06196 Protein of unknown function (DUF997) PI861_03150 PF00474 Sodium:solute symporter family PI861_03155 PF02378 Phosphotransferase system, EIIC PI861_03155 PF00367 phosphotransferase system, EIIB PI861_03155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PI861_03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_03160 PF03466 LysR substrate binding domain PI861_03165 PF08240 Alcohol dehydrogenase GroES-like domain PI861_03165 PF00107 Zinc-binding dehydrogenase PI861_03180 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PI861_03185 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PI861_03190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI861_03190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI861_03190 PF01842 ACT domain PI861_03195 PF14602 Hexapeptide repeat of succinyl-transferase PI861_03195 PF12464 Maltose acetyltransferase PI861_03200 PF02743 Cache domain PI861_03200 PF00672 HAMP domain PI861_03200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_03210 PF00881 Nitroreductase family PI861_03215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PI861_03215 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_03220 PF01343 Peptidase family S49 PI861_03235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PI861_03235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PI861_03240 PF07023 Protein of unknown function (DUF1315) PI861_03245 PF00710 Asparaginase, N-terminal PI861_03245 PF17763 Glutaminase/Asparaginase C-terminal domain PI861_03250 PF03616 Sodium/glutamate symporter PI861_03255 PF00672 HAMP domain PI861_03255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_03255 PF02743 Cache domain PI861_03265 PF01336 OB-fold nucleic acid binding domain PI861_03265 PF00152 tRNA synthetases class II (D, K and N) PI861_03270 PF02567 Phenazine biosynthesis-like protein PI861_03285 PF01507 Phosphoadenosine phosphosulfate reductase family PI861_03290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PI861_03295 PF00528 Binding-protein-dependent transport system inner membrane component PI861_03300 PF00005 ABC transporter PI861_03300 PF00571 CBS domain PI861_03305 PF00186 Dihydrofolate reductase PI861_03310 PF12821 Threonine/Serine exporter, ThrE PI861_03320 PF06738 Putative threonine/serine exporter PI861_03330 PF00994 Probable molybdopterin binding domain PI861_03340 PF00109 Beta-ketoacyl synthase, N-terminal domain PI861_03340 PF02801 Beta-ketoacyl synthase, C-terminal domain PI861_03355 PF02801 Beta-ketoacyl synthase, C-terminal domain PI861_03355 PF00109 Beta-ketoacyl synthase, N-terminal domain PI861_03380 PF00221 Aromatic amino acid lyase PI861_03390 PF07977 FabA-like domain PI861_03395 PF13193 AMP-binding enzyme C-terminal domain PI861_03395 PF00501 AMP-binding enzyme PI861_03405 PF00550 Phosphopantetheine attachment site PI861_03410 PF00550 Phosphopantetheine attachment site PI861_03445 PF03150 Di-haem cytochrome c peroxidase PI861_03445 PF00034 Cytochrome c PI861_03450 PF00194 Eukaryotic-type carbonic anhydrase PI861_03455 PF04227 Indigoidine synthase A like protein PI861_03460 PF00294 pfkB family carbohydrate kinase PI861_03480 PF00582 Universal stress protein family PI861_03490 PF00171 Aldehyde dehydrogenase family PI861_03495 PF01472 PUA domain PI861_03495 PF00696 Amino acid kinase family PI861_03500 PF07417 Sigma factor-binding transcriptional regulator Crl PI861_03505 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) PI861_03510 PF00156 Phosphoribosyl transferase domain PI861_03520 PF01546 Peptidase family M20/M25/M40 PI861_03520 PF07687 Peptidase dimerisation domain PI861_03525 PF00005 ABC transporter PI861_03525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI861_03530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI861_03530 PF00005 ABC transporter PI861_03535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_03540 PF12911 N-terminal TM domain of oligopeptide transport permease C PI861_03540 PF00528 Binding-protein-dependent transport system inner membrane component PI861_03545 PF00528 Binding-protein-dependent transport system inner membrane component PI861_03550 PF00528 Binding-protein-dependent transport system inner membrane component PI861_03555 PF07715 TonB-dependent Receptor Plug Domain PI861_03555 PF00593 TonB dependent receptor PI861_03565 PF01618 MotA/TolQ/ExbB proton channel family PI861_03570 PF01618 MotA/TolQ/ExbB proton channel family PI861_03575 PF02472 Biopolymer transport protein ExbD/TolR PI861_03590 PF06483 Chitinase C PI861_03590 PF00704 Glycosyl hydrolases family 18 PI861_03620 PF00749 tRNA synthetases class I (E and Q), catalytic domain PI861_03625 PF00672 HAMP domain PI861_03625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_03635 PF00313 'Cold-shock' DNA-binding domain PI861_03665 PF00929 Exonuclease PI861_03670 PF03193 RsgA GTPase PI861_03675 PF02666 Phosphatidylserine decarboxylase PI861_03680 PF09905 DNA-binding protein VF530 PI861_03700 PF00990 Diguanylate cyclase, GGDEF domain PI861_03700 PF03707 Bacterial signalling protein N terminal repeat PI861_03700 PF00563 EAL domain PI861_03705 PF06877 Regulator of ribonuclease activity B PI861_03710 PF05547 Immune inhibitor A peptidase M6 PI861_03710 PF00801 PKD domain PI861_03735 PF00732 GMC oxidoreductase PI861_03735 PF05199 GMC oxidoreductase PI861_03740 PF00732 GMC oxidoreductase PI861_03740 PF05199 GMC oxidoreductase PI861_03745 PF00171 Aldehyde dehydrogenase family PI861_03750 PF00561 alpha/beta hydrolase fold PI861_03755 PF00005 ABC transporter PI861_03755 PF00664 ABC transporter transmembrane region PI861_03760 PF06004 Bacterial protein of unknown function (DUF903) PI861_03765 PF00581 Rhodanese-like domain PI861_03770 PF04960 Glutaminase PI861_03775 PF04320 Protein with unknown function (DUF469) PI861_03780 PF02390 Putative methyltransferase PI861_03795 PF00563 EAL domain PI861_03795 PF12792 CSS motif domain associated with EAL PI861_03800 PF01370 NAD dependent epimerase/dehydratase family PI861_03800 PF08338 Domain of unknown function (DUF1731) PI861_03810 PF00005 ABC transporter PI861_03815 PF13472 GDSL-like Lipase/Acylhydrolase family PI861_03820 PF01584 CheW-like domain PI861_03820 PF00072 Response regulator receiver domain PI861_03830 PF06826 Predicted Permease Membrane Region PI861_03830 PF02080 TrkA-C domain PI861_03835 PF03006 Haemolysin-III related PI861_03840 PF00282 Pyridoxal-dependent decarboxylase conserved domain PI861_03845 PF04279 Intracellular septation protein A PI861_03850 PF03795 YCII-related domain PI861_03855 PF00459 Inositol monophosphatase family PI861_03865 PF00483 Nucleotidyl transferase PI861_03870 PF00854 POT family PI861_03875 PF00072 Response regulator receiver domain PI861_03905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_03910 PF02321 Outer membrane efflux protein PI861_03915 PF01207 Dihydrouridine synthase (Dus) PI861_03920 PF02954 Bacterial regulatory protein, Fis family PI861_03925 PF01810 LysE type translocator PI861_03955 PF01521 Iron-sulphur cluster biosynthesis PI861_03965 PF00654 Voltage gated chloride channel PI861_03970 PF00202 Aminotransferase class-III PI861_03985 PF01569 PAP2 superfamily PI861_03995 PF11849 Domain of unknown function (DUF3369) PI861_04000 PF03466 LysR substrate binding domain PI861_04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_04005 PF00893 Small Multidrug Resistance protein PI861_04010 PF00893 Small Multidrug Resistance protein PI861_04015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI861_04020 PF00905 Penicillin binding protein transpeptidase domain PI861_04020 PF14814 Bifunctional transglycosylase second domain PI861_04020 PF00912 Transglycosylase PI861_04025 PF04408 Helicase associated domain (HA2) PI861_04025 PF00270 DEAD/DEAH box helicase PI861_04025 PF00271 Helicase conserved C-terminal domain PI861_04025 PF08482 ATP-dependent helicase C-terminal PI861_04035 PF03749 Sugar fermentation stimulation protein RE domain PI861_04035 PF17746 SfsA N-terminal OB domain PI861_04040 PF01258 Prokaryotic dksA/traR C4-type zinc finger PI861_04045 PF00749 tRNA synthetases class I (E and Q), catalytic domain PI861_04050 PF01743 Poly A polymerase head domain PI861_04050 PF12626 Polymerase A arginine-rich C-terminus PI861_04050 PF12627 Probable RNA and SrmB- binding site of polymerase A PI861_04055 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PI861_04060 PF02548 Ketopantoate hydroxymethyltransferase PI861_04065 PF02569 Pantoate-beta-alanine ligase PI861_04075 PF01061 ABC-2 type transporter PI861_04080 PF00005 ABC transporter PI861_04085 PF00156 Phosphoribosyl transferase domain PI861_04090 PF00440 Bacterial regulatory proteins, tetR family PI861_04095 PF02441 Flavoprotein PI861_04100 PF08245 Mur ligase middle domain PI861_04100 PF02875 Mur ligase family, glutamate ligase domain PI861_04100 PF01225 Mur ligase family, catalytic domain PI861_04105 PF00719 Inorganic pyrophosphatase PI861_04110 PF01208 Uroporphyrinogen decarboxylase (URO-D) PI861_04115 PF00293 NUDIX domain PI861_04115 PF09297 NADH pyrophosphatase zinc ribbon domain PI861_04120 PF14850 DNA-binding domain of Proline dehydrogenase PI861_04120 PF01619 Proline dehydrogenase PI861_04120 PF00171 Aldehyde dehydrogenase family PI861_04120 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PI861_04125 PF08239 Bacterial SH3 domain PI861_04130 PF00027 Cyclic nucleotide-binding domain PI861_04130 PF07885 Ion channel PI861_04140 PF01641 SelR domain PI861_04145 PF00128 Alpha amylase, catalytic domain PI861_04145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PI861_04150 PF02806 Alpha amylase, C-terminal all-beta domain PI861_04150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PI861_04150 PF00128 Alpha amylase, catalytic domain PI861_04155 PF02446 4-alpha-glucanotransferase PI861_04160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PI861_04160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PI861_04165 PF01263 Aldose 1-epimerase PI861_04170 PF02445 Quinolinate synthetase A protein PI861_04240 PF16331 TolA binding protein trimerisation PI861_04240 PF13174 Tetratricopeptide repeat PI861_04245 PF00691 OmpA family PI861_04250 PF04052 TolB amino-terminal domain PI861_04250 PF07676 WD40-like Beta Propeller Repeat PI861_04260 PF02472 Biopolymer transport protein ExbD/TolR PI861_04265 PF01618 MotA/TolQ/ExbB proton channel family PI861_04270 PF03061 Thioesterase superfamily PI861_04275 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) PI861_04280 PF08173 Membrane bound YbgT-like protein PI861_04285 PF02322 Cytochrome bd terminal oxidase subunit II PI861_04290 PF01654 Cytochrome bd terminal oxidase subunit I PI861_04295 PF17864 RuvB AAA lid domain PI861_04295 PF05496 Holliday junction DNA helicase RuvB P-loop domain PI861_04295 PF05491 RuvB C-terminal winged helix domain PI861_04300 PF07499 RuvA, C-terminal domain PI861_04300 PF01330 RuvA N terminal domain PI861_04305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_04305 PF00672 HAMP domain PI861_04310 PF03129 Anticodon binding domain PI861_04310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PI861_04310 PF04073 Aminoacyl-tRNA editing domain PI861_04320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PI861_04330 PF00009 Elongation factor Tu GTP binding domain PI861_04330 PF03144 Elongation factor Tu domain 2 PI861_04330 PF16658 Class II release factor RF3, C-terminal domain PI861_04335 PF00072 Response regulator receiver domain PI861_04335 PF00990 Diguanylate cyclase, GGDEF domain PI861_04345 PF01037 Lrp/AsnC ligand binding domain PI861_04355 PF05762 VWA domain containing CoxE-like protein PI861_04360 PF17868 AAA lid domain PI861_04360 PF12592 Protein of unknown function (DUF3763) PI861_04360 PF07728 AAA domain (dynein-related subfamily) PI861_04370 PF00583 Acetyltransferase (GNAT) family PI861_04370 PF13673 Acetyltransferase (GNAT) domain PI861_04380 PF00501 AMP-binding enzyme PI861_04390 PF04262 Glutamate-cysteine ligase PI861_04395 PF05193 Peptidase M16 inactive domain PI861_04395 PF00675 Insulinase (Peptidase family M16) PI861_04400 PF09335 SNARE associated Golgi protein PI861_04405 PF00107 Zinc-binding dehydrogenase PI861_04405 PF08240 Alcohol dehydrogenase GroES-like domain PI861_04430 PF00970 Oxidoreductase FAD-binding domain PI861_04430 PF00175 Oxidoreductase NAD-binding domain PI861_04435 PF03948 Ribosomal protein L9, C-terminal domain PI861_04435 PF01281 Ribosomal protein L9, N-terminal domain PI861_04440 PF01084 Ribosomal protein S18 PI861_04445 PF01250 Ribosomal protein S6 PI861_04450 PF01566 Natural resistance-associated macrophage protein PI861_04470 PF13673 Acetyltransferase (GNAT) domain PI861_04480 PF00588 SpoU rRNA Methylase family PI861_04480 PF08032 RNA 2'-O ribose methyltransferase substrate binding PI861_04485 PF08206 Ribonuclease B OB domain PI861_04485 PF00575 S1 RNA binding domain PI861_04485 PF00773 RNB domain PI861_04485 PF17876 Cold shock domain PI861_04485 PF08461 Ribonuclease R winged-helix domain PI861_04490 PF00990 Diguanylate cyclase, GGDEF domain PI861_04495 PF02664 S-Ribosylhomocysteinase (LuxS) PI861_04505 PF00543 Nitrogen regulatory protein P-II PI861_04510 PF00795 Carbon-nitrogen hydrolase PI861_04510 PF02540 NAD synthase PI861_04525 PF05567 Neisseria PilC beta-propeller domain PI861_04545 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor PI861_04545 PF07963 Prokaryotic N-terminal methylation motif PI861_04550 PF02401 LytB protein PI861_04555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI861_04560 PF01252 Signal peptidase (SPase) II PI861_04565 PF08264 Anticodon-binding domain of tRNA PI861_04565 PF00133 tRNA synthetases class I (I, L, M and V) PI861_04565 PF06827 Zinc finger found in FPG and IleRS PI861_04570 PF06574 FAD synthetase PI861_04570 PF01687 Riboflavin kinase PI861_04575 PF03023 Lipid II flippase MurJ PI861_04580 PF01649 Ribosomal protein S20 PI861_04585 PF01022 Bacterial regulatory protein, arsR family PI861_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_04590 PF03466 LysR substrate binding domain PI861_04600 PF06965 Na+/H+ antiporter 1 PI861_04605 PF00303 Thymidylate synthase PI861_04610 PF01790 Prolipoprotein diacylglyceryl transferase PI861_04615 PF05524 PEP-utilising enzyme, N-terminal PI861_04615 PF00391 PEP-utilising enzyme, mobile domain PI861_04615 PF02896 PEP-utilising enzyme, TIM barrel domain PI861_04615 PF01590 GAF domain PI861_04620 PF00293 NUDIX domain PI861_04625 PF02976 DNA mismatch repair enzyme MutH PI861_04635 PF01245 Ribosomal protein L19 PI861_04640 PF01746 tRNA (Guanine-1)-methyltransferase PI861_04645 PF01782 RimM N-terminal domain PI861_04645 PF05239 PRC-barrel domain PI861_04650 PF00886 Ribosomal protein S16 PI861_04655 PF00448 SRP54-type protein, GTPase domain PI861_04655 PF02881 SRP54-type protein, helical bundle domain PI861_04655 PF02978 Signal peptide binding domain PI861_04660 PF01578 Cytochrome C assembly protein PI861_04665 PF00571 CBS domain PI861_04665 PF03471 Transporter associated domain PI861_04665 PF01595 Cyclin M transmembrane N-terminal domain PI861_04670 PF02082 Transcriptional regulator PI861_04675 PF00042 Globin PI861_04675 PF00175 Oxidoreductase NAD-binding domain PI861_04675 PF00970 Oxidoreductase FAD-binding domain PI861_04680 PF08238 Sel1 repeat PI861_04685 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PI861_04685 PF00056 lactate/malate dehydrogenase, NAD binding domain PI861_04690 PF00528 Binding-protein-dependent transport system inner membrane component PI861_04700 PF00528 Binding-protein-dependent transport system inner membrane component PI861_04705 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_04710 PF00005 ABC transporter PI861_04715 PF02863 Arginine repressor, C-terminal domain PI861_04715 PF01316 Arginine repressor, DNA binding domain PI861_04720 PF04261 Dyp-type peroxidase family PI861_04725 PF00005 ABC transporter PI861_04725 PF08402 TOBE domain PI861_04735 PF13416 Bacterial extracellular solute-binding protein PI861_04740 PF00543 Nitrogen regulatory protein P-II PI861_04745 PF00472 RF-1 domain PI861_04750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PI861_04750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PI861_04755 PF07662 Na+ dependent nucleoside transporter C-terminus PI861_04755 PF01773 Na+ dependent nucleoside transporter N-terminus PI861_04755 PF07670 Nucleoside recognition PI861_04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_04760 PF03466 LysR substrate binding domain PI861_04765 PF00255 Glutathione peroxidase PI861_04775 PF02595 Glycerate kinase family PI861_04780 PF02447 GntP family permease PI861_04780 PF02447 GntP family permease PI861_04785 PF17853 GGDEF-like domain PI861_04785 PF05651 Putative sugar diacid recognition PI861_04785 PF13556 PucR C-terminal helix-turn-helix domain PI861_04790 PF06062 Uncharacterised protein family (UPF0231) PI861_04805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_04805 PF08447 PAS fold PI861_04810 PF03372 Endonuclease/Exonuclease/phosphatase family PI861_04825 PF00270 DEAD/DEAH box helicase PI861_04825 PF00271 Helicase conserved C-terminal domain PI861_04835 PF08534 Redoxin PI861_04840 PF00403 Heavy-metal-associated domain PI861_04845 PF17967 Pullulanase N2 domain PI861_04845 PF18494 Pullulanase Ins domain PI861_04845 PF11852 Domain of unknown function (DUF3372) PI861_04845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PI861_04845 PF03714 Bacterial pullanase-associated domain PI861_04860 PF02583 Metal-sensitive transcriptional repressor PI861_04865 PF00155 Aminotransferase class I and II PI861_04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_04870 PF03466 LysR substrate binding domain PI861_04885 PF11230 Protein of unknown function (DUF3029) PI861_04920 PF00535 Glycosyl transferase family 2 PI861_04925 PF14883 Hypothetical glycosyl hydrolase family 13 PI861_04925 PF01522 Polysaccharide deacetylase PI861_04930 PF14883 Hypothetical glycosyl hydrolase family 13 PI861_04930 PF01522 Polysaccharide deacetylase PI861_04970 PF17200 Single Cache domain 2 PI861_04970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_04970 PF00672 HAMP domain PI861_04975 PF18416 N-acetylglucosamine binding protein domain 2 PI861_04975 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading PI861_04980 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_04985 PF00005 ABC transporter PI861_04990 PF00528 Binding-protein-dependent transport system inner membrane component PI861_04995 PF00528 Binding-protein-dependent transport system inner membrane component PI861_05000 PF00291 Pyridoxal-phosphate dependent enzyme PI861_05005 PF03466 LysR substrate binding domain PI861_05005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_05010 PF00005 ABC transporter PI861_05010 PF12857 TOBE-like domain PI861_05015 PF00528 Binding-protein-dependent transport system inner membrane component PI861_05020 PF00528 Binding-protein-dependent transport system inner membrane component PI861_05035 PF13194 Domain of unknown function (DUF4010) PI861_05040 PF14602 Hexapeptide repeat of succinyl-transferase PI861_05040 PF12464 Maltose acetyltransferase PI861_05070 PF14552 Tautomerase enzyme PI861_05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_05080 PF03466 LysR substrate binding domain PI861_05085 PF14698 Argininosuccinate lyase C-terminal PI861_05085 PF00206 Lyase PI861_05090 PF00764 Arginosuccinate synthase PI861_05095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PI861_05095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PI861_05100 PF00696 Amino acid kinase family PI861_05105 PF01118 Semialdehyde dehydrogenase, NAD binding domain PI861_05105 PF02774 Semialdehyde dehydrogenase, dimerisation domain PI861_05110 PF07687 Peptidase dimerisation domain PI861_05110 PF01546 Peptidase family M20/M25/M40 PI861_05115 PF00311 Phosphoenolpyruvate carboxylase PI861_05130 PF03960 ArsC family PI861_05135 PF01758 Sodium Bile acid symporter family PI861_05145 PF06953 Arsenical resistance operon trans-acting repressor ArsD PI861_05155 PF01624 MutS domain I PI861_05155 PF05188 MutS domain II PI861_05155 PF05192 MutS domain III PI861_05155 PF05190 MutS family domain IV PI861_05155 PF00488 MutS domain V PI861_05160 PF02028 BCCT, betaine/carnitine/choline family transporter PI861_05175 PF04222 Protein of unknown function (DUF416) PI861_05180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI861_05185 PF01551 Peptidase family M23 PI861_05185 PF01476 LysM domain PI861_05185 PF08525 Opacity-associated protein A N-terminal motif PI861_05205 PF01297 Zinc-uptake complex component A periplasmic PI861_05210 PF00005 ABC transporter PI861_05215 PF00950 ABC 3 transport family PI861_05220 PF03466 LysR substrate binding domain PI861_05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_05230 PF03167 Uracil DNA glycosylase superfamily PI861_05235 PF00892 EamA-like transporter family PI861_05245 PF01541 GIY-YIG catalytic domain PI861_05260 PF04012 PspA/IM30 family PI861_05265 PF01553 Acyltransferase PI861_05285 PF00085 Thioredoxin PI861_05290 PF07681 DoxX PI861_05295 PF00226 DnaJ domain PI861_05295 PF01556 DnaJ C terminal domain PI861_05295 PF00684 DnaJ central domain PI861_05330 PF00521 DNA gyrase/topoisomerase IV, subunit A PI861_05330 PF03989 DNA gyrase C-terminal domain, beta-propeller PI861_05335 PF00986 DNA gyrase B subunit, carboxyl terminus PI861_05335 PF01751 Toprim domain PI861_05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_05335 PF00204 DNA gyrase B PI861_05345 PF00293 NUDIX domain PI861_05350 PF05728 Uncharacterised protein family (UPF0227) PI861_05355 PF00149 Calcineurin-like phosphoesterase PI861_05360 PF06853 Protein of unknown function (DUF1249) PI861_05365 PF00293 NUDIX domain PI861_05370 PF13358 DDE superfamily endonuclease PI861_05370 PF13592 Winged helix-turn helix PI861_05375 PF02321 Outer membrane efflux protein PI861_05380 PF00294 pfkB family carbohydrate kinase PI861_05380 PF01467 Cytidylyltransferase-like PI861_05385 PF03279 Bacterial lipid A biosynthesis acyltransferase PI861_05400 PF01865 Protein of unknown function DUF47 PI861_05405 PF01384 Phosphate transporter family PI861_05410 PF01966 HD domain PI861_05410 PF01743 Poly A polymerase head domain PI861_05410 PF12627 Probable RNA and SrmB- binding site of polymerase A PI861_05415 PF01471 Putative peptidoglycan binding domain PI861_05415 PF13401 AAA domain PI861_05420 PF16537 Type II secretion system protein B PI861_05425 PF00730 HhH-GPD superfamily base excision DNA repair protein PI861_05425 PF14815 NUDIX domain PI861_05425 PF00633 Helix-hairpin-helix motif PI861_05425 PF10576 Iron-sulfur binding domain of endonuclease III PI861_05430 PF04362 Bacterial Fe(2+) trafficking PI861_05435 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain PI861_05435 PF01464 Transglycosylase SLT domain PI861_05440 PF04076 Bacterial OB fold (BOF) protein PI861_05445 PF00657 GDSL-like Lipase/Acylhydrolase PI861_05455 PF00691 OmpA family PI861_05455 PF01389 OmpA-like transmembrane domain PI861_05460 PF03886 ABC-type transport auxiliary lipoprotein component PI861_05465 PF02470 MlaD protein PI861_05470 PF04403 Paraquat-inducible protein A PI861_05475 PF17209 Hfq protein PI861_05480 PF13419 Haloacid dehalogenase-like hydrolase PI861_05495 PF00701 Dihydrodipicolinate synthetase family PI861_05500 PF05175 Methyltransferase small domain PI861_05500 PF08468 Methyltransferase small domain N-terminal PI861_05505 PF00483 Nucleotidyl transferase PI861_05510 PF08323 Starch synthase catalytic domain PI861_05510 PF00534 Glycosyl transferases group 1 PI861_05550 PF03553 Na+/H+ antiporter family PI861_05560 PF14602 Hexapeptide repeat of succinyl-transferase PI861_05560 PF12464 Maltose acetyltransferase PI861_05565 PF11941 Domain of unknown function (DUF3459) PI861_05565 PF00128 Alpha amylase, catalytic domain PI861_05575 PF00356 Bacterial regulatory proteins, lacI family PI861_05585 PF02378 Phosphotransferase system, EIIC PI861_05590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI861_05595 PF02378 Phosphotransferase system, EIIC PI861_05600 PF00232 Glycosyl hydrolase family 1 PI861_05605 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit PI861_05610 PF00480 ROK family PI861_05620 PF00356 Bacterial regulatory proteins, lacI family PI861_05630 PF17763 Glutaminase/Asparaginase C-terminal domain PI861_05630 PF00710 Asparaginase, N-terminal PI861_05645 PF02142 MGS-like domain PI861_05655 PF00210 Ferritin-like domain PI861_05670 PF08351 Domain of unknown function (DUF1726) PI861_05670 PF17176 tRNA-binding domain PI861_05670 PF05127 Helicase PI861_05670 PF13718 GNAT acetyltransferase 2 PI861_05675 PF00106 short chain dehydrogenase PI861_05680 PF00072 Response regulator receiver domain PI861_05680 PF01584 CheW-like domain PI861_05690 PF07670 Nucleoside recognition PI861_05790 PF02660 Glycerol-3-phosphate acyltransferase PI861_05795 PF02152 Dihydroneopterin aldolase PI861_05800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PI861_05810 PF07690 Major Facilitator Superfamily PI861_05815 PF07683 Cobalamin synthesis protein cobW C-terminal domain PI861_05815 PF02492 CobW/HypB/UreG, nucleotide-binding domain PI861_05825 PF01810 LysE type translocator PI861_05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_05830 PF03466 LysR substrate binding domain PI861_05835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_05835 PF03466 LysR substrate binding domain PI861_05845 PF00563 EAL domain PI861_05845 PF12792 CSS motif domain associated with EAL PI861_05850 PF11791 Aconitate B N-terminal domain PI861_05850 PF00330 Aconitase family (aconitate hydratase) PI861_05850 PF06434 Aconitate hydratase 2 N-terminus PI861_05865 PF12729 Four helix bundle sensory module for signal transduction PI861_05865 PF00672 HAMP domain PI861_05865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_05875 PF13426 PAS domain PI861_05875 PF08448 PAS fold PI861_05875 PF08447 PAS fold PI861_05875 PF05231 MASE1 PI861_05875 PF00990 Diguanylate cyclase, GGDEF domain PI861_05875 PF00563 EAL domain PI861_05880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PI861_05880 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_05885 PF00364 Biotin-requiring enzyme PI861_05885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PI861_05885 PF02817 e3 binding domain PI861_05890 PF17831 Pyruvate dehydrogenase E1 component middle domain PI861_05890 PF00456 Transketolase, thiamine diphosphate binding domain PI861_05895 PF07729 FCD domain PI861_05895 PF00392 Bacterial regulatory proteins, gntR family PI861_05900 PF01510 N-acetylmuramoyl-L-alanine amidase PI861_05910 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PI861_05910 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PI861_05915 PF07963 Prokaryotic N-terminal methylation motif PI861_05920 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PI861_05920 PF00437 Type II/IV secretion system protein PI861_05930 PF06750 Bacterial Peptidase A24 N-terminal domain PI861_05930 PF01478 Type IV leader peptidase family PI861_05935 PF01121 Dephospho-CoA kinase PI861_05940 PF07072 Cell division protein PI861_05945 PF03884 DNA gyrase inhibitor YacG PI861_05950 PF00293 NUDIX domain PI861_05960 PF07516 SecA Wing and Scaffold domain PI861_05960 PF01043 SecA preprotein cross-linking domain PI861_05960 PF07517 SecA DEAD-like domain PI861_05960 PF02810 SEC-C motif PI861_05970 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PI861_05975 PF00091 Tubulin/FtsZ family, GTPase domain PI861_05975 PF12327 FtsZ family, C-terminal domain PI861_05980 PF02491 SHS2 domain inserted in FTSA PI861_05985 PF08478 POTRA domain, FtsQ-type PI861_05985 PF03799 Cell division protein FtsQ PI861_05990 PF02875 Mur ligase family, glutamate ligase domain PI861_05990 PF08245 Mur ligase middle domain PI861_05990 PF01225 Mur ligase family, catalytic domain PI861_05995 PF04101 Glycosyltransferase family 28 C-terminal domain PI861_05995 PF03033 Glycosyltransferase family 28 N-terminal domain PI861_06000 PF01098 Cell cycle protein PI861_06005 PF02875 Mur ligase family, glutamate ligase domain PI861_06005 PF08245 Mur ligase middle domain PI861_06010 PF00953 Glycosyl transferase family 4 PI861_06010 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PI861_06015 PF02875 Mur ligase family, glutamate ligase domain PI861_06015 PF01225 Mur ligase family, catalytic domain PI861_06015 PF08245 Mur ligase middle domain PI861_06020 PF08245 Mur ligase middle domain PI861_06020 PF01225 Mur ligase family, catalytic domain PI861_06020 PF02875 Mur ligase family, glutamate ligase domain PI861_06025 PF03717 Penicillin-binding Protein dimerisation domain PI861_06025 PF00905 Penicillin binding protein transpeptidase domain PI861_06030 PF04999 Cell division protein FtsL PI861_06035 PF01795 MraW methylase family PI861_06040 PF02381 MraZ protein, putative antitoxin-like PI861_06050 PF01464 Transglycosylase SLT domain PI861_06050 PF01476 LysM domain PI861_06055 PF13677 Membrane MotB of proton-channel complex MotA/MotB PI861_06055 PF00691 OmpA family PI861_06060 PF01618 MotA/TolQ/ExbB proton channel family PI861_06085 PF02561 Flagellar protein FliS PI861_06090 PF02465 Flagellar hook-associated protein 2 N-terminus PI861_06090 PF07195 Flagellar hook-associated protein 2 C-terminus PI861_06090 PF07196 Flagellin hook IN motif PI861_06105 PF00669 Bacterial flagellin N-terminal helical region PI861_06105 PF00700 Bacterial flagellin C-terminal helical region PI861_06125 PF00460 Flagella basal body rod protein PI861_06125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_06135 PF02119 Flagellar P-ring protein PI861_06140 PF02107 Flagellar L-ring protein PI861_06145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_06145 PF00460 Flagella basal body rod protein PI861_06150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_06150 PF00460 Flagella basal body rod protein PI861_06155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_06155 PF00460 Flagella basal body rod protein PI861_06155 PF07559 Flagellar basal body protein FlaE PI861_06165 PF13860 FlgD Ig-like domain PI861_06165 PF03963 Flagellar hook capping protein - N-terminal region PI861_06165 PF13861 FlgD Tudor-like domain PI861_06170 PF00460 Flagella basal body rod protein PI861_06170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PI861_06175 PF00460 Flagella basal body rod protein PI861_06185 PF04316 Anti-sigma-28 factor, FlgM PI861_06200 PF18269 T3SS EscN ATPase C-terminal domain PI861_06200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI861_06210 PF14842 FliG N-terminal domain PI861_06210 PF14841 FliG middle domain PI861_06210 PF01706 FliG C-terminal domain PI861_06215 PF08345 Flagellar M-ring protein C-terminal PI861_06215 PF01514 Secretory protein of YscJ/FliF family PI861_06220 PF02049 Flagellar hook-basal body complex protein FliE PI861_06225 PF02954 Bacterial regulatory protein, Fis family PI861_06225 PF00158 Sigma-54 interaction domain PI861_06225 PF00072 Response regulator receiver domain PI861_06230 PF00771 FHIPEP family PI861_06235 PF01312 FlhB HrpN YscU SpaS Family PI861_06240 PF01311 Bacterial export proteins, family 1 PI861_06245 PF01313 Bacterial export proteins, family 3 PI861_06250 PF00813 FliP family PI861_06255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI861_06270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PI861_06275 PF04348 LppC putative lipoprotein PI861_06280 PF02021 Uncharacterised protein family UPF0102 PI861_06285 PF13580 SIS domain PI861_06290 PF04972 BON domain PI861_06295 PF04386 Stringent starvation protein B PI861_06300 PF00043 Glutathione S-transferase, C-terminal domain PI861_06300 PF02798 Glutathione S-transferase, N-terminal domain PI861_06305 PF02167 Cytochrome C1 family PI861_06310 PF00032 Cytochrome b(C-terminal)/b6/petD PI861_06310 PF00033 Cytochrome b/b6/petB PI861_06315 PF00355 Rieske [2Fe-2S] domain PI861_06315 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PI861_06320 PF00380 Ribosomal protein S9/S16 PI861_06325 PF00572 Ribosomal protein L13 PI861_06330 PF03969 AFG1-like ATPase PI861_06340 PF00595 PDZ domain PI861_06340 PF13180 PDZ domain PI861_06345 PF13180 PDZ domain PI861_06375 PF01979 Amidohydrolase family PI861_06380 PF03841 L-seryl-tRNA selenium transferase PI861_06385 PF07071 KDGP aldolase PI861_06395 PF00381 PTS HPr component phosphorylation site PI861_06400 PF03668 P-loop ATPase protein family PI861_06405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI861_06410 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PI861_06415 PF04963 Sigma-54 factor, core binding domain PI861_06415 PF04552 Sigma-54, DNA binding domain PI861_06415 PF00309 Sigma-54 factor, Activator interacting domain (AID) PI861_06420 PF00005 ABC transporter PI861_06420 PF12399 Branched-chain amino acid ATP-binding cassette transporter PI861_06425 PF03968 OstA-like protein PI861_06430 PF06835 Lipopolysaccharide-assembly, LptC-related PI861_06440 PF00571 CBS domain PI861_06440 PF01380 SIS domain PI861_06445 PF00005 ABC transporter PI861_06450 PF02405 Permease MlaE PI861_06455 PF02470 MlaD protein PI861_06460 PF05494 MlaC protein PI861_06470 PF01722 BolA-like protein PI861_06475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PI861_06480 PF01523 Putative modulator of DNA gyrase PI861_06485 PF04751 Protein of unknown function (DUF615) PI861_06495 PF04363 Protein of unknown function (DUF496) PI861_06525 PF00009 Elongation factor Tu GTP binding domain PI861_06525 PF03144 Elongation factor Tu domain 2 PI861_06525 PF03143 Elongation factor Tu C-terminal domain PI861_06530 PF00679 Elongation factor G C-terminus PI861_06530 PF14492 Elongation Factor G, domain II PI861_06530 PF03764 Elongation factor G, domain IV PI861_06530 PF00009 Elongation factor Tu GTP binding domain PI861_06530 PF03144 Elongation factor Tu domain 2 PI861_06535 PF00177 Ribosomal protein S7p/S5e PI861_06540 PF00164 Ribosomal protein S12/S23 PI861_06545 PF04077 DsrH like protein PI861_06550 PF02635 DsrE/DsrF-like family PI861_06555 PF02635 DsrE/DsrF-like family PI861_06560 PF01042 Endoribonuclease L-PSP PI861_06565 PF13309 HTH domain PI861_06565 PF08348 YheO-like PAS domain PI861_06570 PF04997 RNA polymerase Rpb1, domain 1 PI861_06570 PF00623 RNA polymerase Rpb1, domain 2 PI861_06570 PF04983 RNA polymerase Rpb1, domain 3 PI861_06570 PF05000 RNA polymerase Rpb1, domain 4 PI861_06570 PF04998 RNA polymerase Rpb1, domain 5 PI861_06575 PF04563 RNA polymerase beta subunit PI861_06575 PF04561 RNA polymerase Rpb2, domain 2 PI861_06575 PF04565 RNA polymerase Rpb2, domain 3 PI861_06575 PF10385 RNA polymerase beta subunit external 1 domain PI861_06575 PF00562 RNA polymerase Rpb2, domain 6 PI861_06575 PF04560 RNA polymerase Rpb2, domain 7 PI861_06580 PF16320 Ribosomal protein L7/L12 dimerisation domain PI861_06580 PF00542 Ribosomal protein L7/L12 C-terminal domain PI861_06585 PF00466 Ribosomal protein L10 PI861_06590 PF00687 Ribosomal protein L1p/L10e family PI861_06595 PF00298 Ribosomal protein L11, RNA binding domain PI861_06595 PF03946 Ribosomal protein L11, N-terminal domain PI861_06600 PF00467 KOW motif PI861_06600 PF02357 Transcription termination factor nusG PI861_06605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PI861_06615 PF00009 Elongation factor Tu GTP binding domain PI861_06615 PF03144 Elongation factor Tu domain 2 PI861_06615 PF03143 Elongation factor Tu C-terminal domain PI861_06630 PF00485 Phosphoribulokinase / Uridine kinase family PI861_06635 PF08279 HTH domain PI861_06635 PF02237 Biotin protein ligase C terminal domain PI861_06635 PF03099 Biotin/lipoate A/B protein ligase family PI861_06640 PF01565 FAD binding domain PI861_06640 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PI861_06645 PF02080 TrkA-C domain PI861_06645 PF02254 TrkA-N domain PI861_06650 PF02386 Cation transport protein PI861_06655 PF01131 DNA topoisomerase PI861_06655 PF01751 Toprim domain PI861_06660 PF03264 NapC/NirT cytochrome c family, N-terminal region PI861_06665 PF00384 Molybdopterin oxidoreductase PI861_06665 PF18364 Molybdopterin oxidoreductase N-terminal domain PI861_06665 PF01568 Molydopterin dinucleotide binding domain PI861_06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_06680 PF00486 Transcriptional regulatory protein, C terminal PI861_06680 PF00072 Response regulator receiver domain PI861_06695 PF01794 Ferric reductase like transmembrane component PI861_06700 PF00174 Oxidoreductase molybdopterin binding domain PI861_06705 PF06496 Protein of unknown function (DUF1097) PI861_06710 PF00072 Response regulator receiver domain PI861_06710 PF00158 Sigma-54 interaction domain PI861_06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_06720 PF00512 His Kinase A (phospho-acceptor) domain PI861_06740 PF01743 Poly A polymerase head domain PI861_06740 PF00571 CBS domain PI861_06740 PF01368 DHH family PI861_06740 PF02272 DHHA1 domain PI861_06755 PF01037 Lrp/AsnC ligand binding domain PI861_06760 PF03590 Aspartate-ammonia ligase PI861_06765 PF00004 ATPase family associated with various cellular activities (AAA) PI861_06765 PF07724 AAA domain (Cdc48 subfamily) PI861_06765 PF17871 AAA lid domain PI861_06765 PF02861 Clp amino terminal domain, pathogenicity island component PI861_06765 PF10431 C-terminal, D2-small domain, of ClpB protein PI861_06770 PF02578 Multi-copper polyphenol oxidoreductase laccase PI861_06775 PF01479 S4 domain PI861_06775 PF00849 RNA pseudouridylate synthase PI861_06780 PF13525 Outer membrane lipoprotein PI861_06785 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_06785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PI861_06790 PF00375 Sodium:dicarboxylate symporter family PI861_06795 PF03313 Serine dehydratase alpha chain PI861_06800 PF08348 YheO-like PAS domain PI861_06800 PF13309 HTH domain PI861_06810 PF02233 NAD(P) transhydrogenase beta subunit PI861_06815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PI861_06815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PI861_06815 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PI861_06820 PF00465 Iron-containing alcohol dehydrogenase PI861_06825 PF06719 AraC-type transcriptional regulator N-terminus PI861_06825 PF12833 Helix-turn-helix domain PI861_06830 PF08212 Lipocalin-like domain PI861_06835 PF02743 Cache domain PI861_06835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_06835 PF00672 HAMP domain PI861_06840 PF02666 Phosphatidylserine decarboxylase PI861_06855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PI861_06855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PI861_06860 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain PI861_06860 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain PI861_06865 PF01316 Arginine repressor, DNA binding domain PI861_06865 PF02863 Arginine repressor, C-terminal domain PI861_06870 PF03606 C4-dicarboxylate anaerobic carrier PI861_06875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PI861_06875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PI861_06880 PF00696 Amino acid kinase family PI861_06905 PF02743 Cache domain PI861_06905 PF00672 HAMP domain PI861_06905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_06915 PF00005 ABC transporter PI861_06920 PF13407 Periplasmic binding protein domain PI861_06930 PF00356 Bacterial regulatory proteins, lacI family PI861_06935 PF16363 GDP-mannose 4,6 dehydratase PI861_06940 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain PI861_06940 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain PI861_06945 PF10509 Galactokinase galactose-binding signature PI861_06945 PF08544 GHMP kinases C terminal PI861_06945 PF00288 GHMP kinases N terminal domain PI861_06950 PF01263 Aldose 1-epimerase PI861_06955 PF00248 Aldo/keto reductase family PI861_06960 PF02673 Bacitracin resistance protein BacA PI861_06970 PF04545 Sigma-70, region 4 PI861_06970 PF04542 Sigma-70 region 2 PI861_06980 PF00750 tRNA synthetases class I (R) PI861_06980 PF05746 DALR anticodon binding domain PI861_06980 PF03485 Arginyl tRNA synthetase N terminal domain PI861_06990 PF00227 Proteasome subunit PI861_06995 PF07724 AAA domain (Cdc48 subfamily) PI861_06995 PF00004 ATPase family associated with various cellular activities (AAA) PI861_06995 PF10431 C-terminal, D2-small domain, of ClpB protein PI861_07000 PF07690 Major Facilitator Superfamily PI861_07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_07005 PF03466 LysR substrate binding domain PI861_07010 PF18267 Rubredoxin NAD+ reductase C-terminal domain PI861_07010 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_07010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PI861_07010 PF04324 BFD-like [2Fe-2S] binding domain PI861_07010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PI861_07020 PF13806 Rieske-like [2Fe-2S] domain PI861_07025 PF01226 Formate/nitrite transporter PI861_07030 PF10414 Sirohaem synthase dimerisation region PI861_07030 PF14824 Sirohaem biosynthesis protein central PI861_07030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PI861_07035 PF01769 Divalent cation transporter PI861_07035 PF00571 CBS domain PI861_07035 PF03448 MgtE intracellular N domain PI861_07050 PF03737 Aldolase/RraA PI861_07055 PF02592 Putative vitamin uptake transporter PI861_07065 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PI861_07070 PF00034 Cytochrome c PI861_07075 PF09382 RQC domain PI861_07075 PF00570 HRDC domain PI861_07075 PF00271 Helicase conserved C-terminal domain PI861_07075 PF00270 DEAD/DEAH box helicase PI861_07075 PF16124 RecQ zinc-binding PI861_07080 PF03061 Thioesterase superfamily PI861_07095 PF03475 3-alpha domain PI861_07095 PF03473 MOSC domain PI861_07100 PF00528 Binding-protein-dependent transport system inner membrane component PI861_07105 PF00528 Binding-protein-dependent transport system inner membrane component PI861_07110 PF00005 ABC transporter PI861_07110 PF08402 TOBE domain PI861_07115 PF13416 Bacterial extracellular solute-binding protein PI861_07120 PF13416 Bacterial extracellular solute-binding protein PI861_07125 PF00202 Aminotransferase class-III PI861_07130 PF00120 Glutamine synthetase, catalytic domain PI861_07135 PF01258 Prokaryotic dksA/traR C4-type zinc finger PI861_07145 PF05981 CreA protein PI861_07150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI861_07150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI861_07155 PF00012 Hsp70 protein PI861_07170 PF02903 Alpha amylase, N-terminal ig-like domain PI861_07170 PF00128 Alpha amylase, catalytic domain PI861_07175 PF02719 Polysaccharide biosynthesis protein PI861_07185 PF13592 Winged helix-turn helix PI861_07185 PF13358 DDE superfamily endonuclease PI861_07195 PF08437 Glycosyl transferase family 8 C-terminal PI861_07195 PF01501 Glycosyl transferase family 8 PI861_07215 PF00501 AMP-binding enzyme PI861_07215 PF13193 AMP-binding enzyme C-terminal domain PI861_07235 PF02348 Cytidylyltransferase PI861_07245 PF08666 SAF domain PI861_07245 PF03102 NeuB family PI861_07315 PF05958 tRNA (Uracil-5-)-methyltransferase PI861_07320 PF00486 Transcriptional regulatory protein, C terminal PI861_07320 PF00072 Response regulator receiver domain PI861_07325 PF00512 His Kinase A (phospho-acceptor) domain PI861_07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_07325 PF00672 HAMP domain PI861_07335 PF03949 Malic enzyme, NAD binding domain PI861_07335 PF00390 Malic enzyme, N-terminal domain PI861_07340 PF13460 NAD(P)H-binding PI861_07340 PF11066 Protein of unknown function (DUF2867) PI861_07345 PF01197 Ribosomal protein L31 PI861_07350 PF17764 3′ DNA-binding domain (3′BD) PI861_07350 PF00271 Helicase conserved C-terminal domain PI861_07350 PF18074 Primosomal protein N C-terminal domain PI861_07350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PI861_07350 PF00270 DEAD/DEAH box helicase PI861_07360 PF00440 Bacterial regulatory proteins, tetR family PI861_07370 PF01389 OmpA-like transmembrane domain PI861_07370 PF00691 OmpA family PI861_07375 PF00291 Pyridoxal-phosphate dependent enzyme PI861_07375 PF00585 C-terminal regulatory domain of Threonine dehydratase PI861_07380 PF00920 Dehydratase family PI861_07385 PF01063 Amino-transferase class IV PI861_07395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PI861_07395 PF00205 Thiamine pyrophosphate enzyme, central domain PI861_07395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PI861_07405 PF01553 Acyltransferase PI861_07410 PF04463 Protein of unknown function (DUF523) PI861_07420 PF00857 Isochorismatase family PI861_07425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PI861_07425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PI861_07435 PF00005 ABC transporter PI861_07440 PF00528 Binding-protein-dependent transport system inner membrane component PI861_07445 PF01323 DSBA-like thioredoxin domain PI861_07450 PF01636 Phosphotransferase enzyme family PI861_07455 PF13746 4Fe-4S dicluster domain PI861_07455 PF12801 4Fe-4S binding domain PI861_07455 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PI861_07460 PF06288 Protein of unknown function (DUF1040) PI861_07465 PF00360 Phytochrome region PI861_07465 PF00990 Diguanylate cyclase, GGDEF domain PI861_07465 PF01590 GAF domain PI861_07465 PF00563 EAL domain PI861_07470 PF13411 MerR HTH family regulatory protein PI861_07475 PF00403 Heavy-metal-associated domain PI861_07480 PF00156 Phosphoribosyl transferase domain PI861_07485 PF01138 3' exoribonuclease family, domain 1 PI861_07485 PF03725 3' exoribonuclease family, domain 2 PI861_07490 PF08340 Domain of unknown function (DUF1732) PI861_07490 PF03755 YicC-like family, N-terminal region PI861_07505 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) PI861_07520 PF13439 Glycosyltransferase Family 4 PI861_07520 PF00534 Glycosyl transferases group 1 PI861_07525 PF01370 NAD dependent epimerase/dehydratase family PI861_07530 PF00440 Bacterial regulatory proteins, tetR family PI861_07530 PF08360 QacR-like protein, C-terminal region PI861_07535 PF00155 Aminotransferase class I and II PI861_07540 PF00107 Zinc-binding dehydrogenase PI861_07540 PF08240 Alcohol dehydrogenase GroES-like domain PI861_07555 PF00580 UvrD/REP helicase N-terminal domain PI861_07555 PF13361 UvrD-like helicase C-terminal domain PI861_07560 PF00266 Aminotransferase class-V PI861_07565 PF02657 Fe-S metabolism associated domain PI861_07570 PF00899 ThiF family PI861_07600 PF12724 Flavodoxin domain PI861_07605 PF02386 Cation transport protein PI861_07610 PF01205 Uncharacterized protein family UPF0029 PI861_07610 PF09186 Domain of unknown function (DUF1949) PI861_07615 PF00557 Metallopeptidase family M24 PI861_07620 PF00501 AMP-binding enzyme PI861_07620 PF13193 AMP-binding enzyme C-terminal domain PI861_07625 PF00378 Enoyl-CoA hydratase/isomerase PI861_07625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PI861_07625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PI861_07630 PF02803 Thiolase, C-terminal domain PI861_07630 PF00108 Thiolase, N-terminal domain PI861_07635 PF00072 Response regulator receiver domain PI861_07635 PF00486 Transcriptional regulatory protein, C terminal PI861_07640 PF00672 HAMP domain PI861_07640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_07640 PF00512 His Kinase A (phospho-acceptor) domain PI861_07650 PF01547 Bacterial extracellular solute-binding protein PI861_07660 PF01206 Sulfurtransferase TusA PI861_07665 PF01042 Endoribonuclease L-PSP PI861_07670 PF13488 Glycine zipper PI861_07670 PF00691 OmpA family PI861_07675 PF03352 Methyladenine glycosylase PI861_07680 PF02091 Glycyl-tRNA synthetase alpha subunit PI861_07685 PF05746 DALR anticodon binding domain PI861_07685 PF02092 Glycyl-tRNA synthetase beta subunit PI861_07690 PF11008 Protein of unknown function (DUF2846) PI861_07695 PF01202 Shikimate kinase PI861_07705 PF13426 PAS domain PI861_07705 PF00990 Diguanylate cyclase, GGDEF domain PI861_07705 PF00563 EAL domain PI861_07710 PF03545 Yersinia virulence determinant (YopE) PI861_07710 PF03496 ADP-ribosyltransferase exoenzyme PI861_07715 PF05932 Tir chaperone protein (CesT) family PI861_07720 PF03222 Tryptophan/tyrosine permease family PI861_07725 PF12801 4Fe-4S binding domain PI861_07735 PF18113 Rubredoxin binding C-terminal domain PI861_07735 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_07740 PF00258 Flavodoxin PI861_07740 PF00753 Metallo-beta-lactamase superfamily PI861_07740 PF00301 Rubredoxin PI861_07745 PF01590 GAF domain PI861_07745 PF00158 Sigma-54 interaction domain PI861_07750 PF00392 Bacterial regulatory proteins, gntR family PI861_07750 PF07702 UTRA domain PI861_07755 PF00367 phosphotransferase system, EIIB PI861_07755 PF02378 Phosphotransferase system, EIIC PI861_07760 PF02056 Family 4 glycosyl hydrolase PI861_07760 PF11975 Family 4 glycosyl hydrolase C-terminal domain PI861_07765 PF00356 Bacterial regulatory proteins, lacI family PI861_07770 PF13458 Periplasmic binding protein PI861_07775 PF02653 Branched-chain amino acid transport system / permease component PI861_07780 PF11862 Domain of unknown function (DUF3382) PI861_07780 PF02653 Branched-chain amino acid transport system / permease component PI861_07785 PF12399 Branched-chain amino acid ATP-binding cassette transporter PI861_07785 PF00005 ABC transporter PI861_07790 PF00005 ABC transporter PI861_07800 PF01810 LysE type translocator PI861_07805 PF00581 Rhodanese-like domain PI861_07810 PF01694 Rhomboid family PI861_07810 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease PI861_07815 PF12262 Bacterial virulence factor lipase N-terminal PI861_07820 PF04380 Membrane fusogenic activity PI861_07825 PF00175 Oxidoreductase NAD-binding domain PI861_07830 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PI861_07840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI861_07840 PF07497 Rho termination factor, RNA-binding domain PI861_07840 PF07498 Rho termination factor, N-terminal domain PI861_07845 PF00085 Thioredoxin PI861_07850 PF00271 Helicase conserved C-terminal domain PI861_07850 PF00270 DEAD/DEAH box helicase PI861_07855 PF02541 Ppx/GppA phosphatase family PI861_07865 PF04445 Putative SAM-dependent methyltransferase PI861_07870 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_07875 PF00563 EAL domain PI861_07875 PF03707 Bacterial signalling protein N terminal repeat PI861_07875 PF00990 Diguanylate cyclase, GGDEF domain PI861_07880 PF01432 Peptidase family M3 PI861_07885 PF00490 Delta-aminolevulinic acid dehydratase PI861_07890 PF01026 TatD related DNase PI861_07895 PF00902 Sec-independent protein translocase protein (TatC) PI861_07900 PF02416 mttA/Hcf106 family PI861_07905 PF02416 mttA/Hcf106 family PI861_07910 PF03109 ABC1 family PI861_07915 PF02036 SCP-2 sterol transfer family PI861_07920 PF01209 ubiE/COQ5 methyltransferase family PI861_07925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PI861_07970 PF03544 Gram-negative bacterial TonB protein C-terminal PI861_07975 PF02472 Biopolymer transport protein ExbD/TolR PI861_07980 PF01618 MotA/TolQ/ExbB proton channel family PI861_07985 PF01618 MotA/TolQ/ExbB proton channel family PI861_07995 PF03472 Autoinducer binding domain PI861_07995 PF00196 Bacterial regulatory proteins, luxR family PI861_08010 PF02384 N-6 DNA Methylase PI861_08015 PF13358 DDE superfamily endonuclease PI861_08015 PF13592 Winged helix-turn helix PI861_08020 PF01420 Type I restriction modification DNA specificity domain PI861_08025 PF01695 IstB-like ATP binding protein PI861_08030 PF00665 Integrase core domain PI861_08035 PF01420 Type I restriction modification DNA specificity domain PI861_08055 PF15978 Tn7-like transposition protein D PI861_08055 PF06527 TniQ PI861_08065 PF06527 TniQ PI861_08065 PF15978 Tn7-like transposition protein D PI861_08070 PF11426 Tn7 transposition regulator TnsC PI861_08070 PF13401 AAA domain PI861_08075 PF11426 Tn7 transposition regulator TnsC PI861_08075 PF13401 AAA domain PI861_08080 PF00665 Integrase core domain PI861_08085 PF08721 TnsA endonuclease C terminal PI861_08085 PF08722 TnsA endonuclease N terminal PI861_08090 PF01380 SIS domain PI861_08095 PF08220 DeoR-like helix-turn-helix domain PI861_08095 PF00455 DeoR C terminal sensor domain PI861_08100 PF00072 Response regulator receiver domain PI861_08100 PF00486 Transcriptional regulatory protein, C terminal PI861_08105 PF00672 HAMP domain PI861_08105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_08105 PF00512 His Kinase A (phospho-acceptor) domain PI861_08115 PF06123 Inner membrane protein CreD PI861_08120 PF00132 Bacterial transferase hexapeptide (six repeats) PI861_08120 PF14602 Hexapeptide repeat of succinyl-transferase PI861_08120 PF12804 MobA-like NTP transferase domain PI861_08125 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PI861_08125 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PI861_08130 PF02874 ATP synthase alpha/beta family, beta-barrel domain PI861_08130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI861_08135 PF00231 ATP synthase PI861_08140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI861_08140 PF00306 ATP synthase alpha/beta chain, C terminal domain PI861_08140 PF02874 ATP synthase alpha/beta family, beta-barrel domain PI861_08145 PF00213 ATP synthase delta (OSCP) subunit PI861_08150 PF00430 ATP synthase B/B' CF(0) PI861_08155 PF00137 ATP synthase subunit C PI861_08160 PF00119 ATP synthase A chain PI861_08165 PF03899 ATP synthase I chain PI861_08170 PF02195 ParB-like nuclease domain PI861_08170 PF17762 HTH domain found in ParB protein PI861_08175 PF13614 AAA domain PI861_08180 PF02527 rRNA small subunit methyltransferase G PI861_08185 PF01134 Glucose inhibited division protein A PI861_08185 PF13932 GidA associated domain PI861_08190 PF00258 Flavodoxin PI861_08195 PF07715 TonB-dependent Receptor Plug Domain PI861_08195 PF00593 TonB dependent receptor PI861_08200 PF00005 ABC transporter PI861_08205 PF00005 ABC transporter PI861_08210 PF01497 Periplasmic binding protein PI861_08215 PF01032 FecCD transport family PI861_08220 PF07715 TonB-dependent Receptor Plug Domain PI861_08220 PF00593 TonB dependent receptor PI861_08225 PF01497 Periplasmic binding protein PI861_08230 PF00005 ABC transporter PI861_08235 PF01032 FecCD transport family PI861_08240 PF01032 FecCD transport family PI861_08245 PF00005 ABC transporter PI861_08250 PF00664 ABC transporter transmembrane region PI861_08250 PF00005 ABC transporter PI861_08250 PF08021 Siderophore-interacting FAD-binding domain PI861_08250 PF04954 Siderophore-interacting protein PI861_08260 PF13193 AMP-binding enzyme C-terminal domain PI861_08260 PF00668 Condensation domain PI861_08260 PF00550 Phosphopantetheine attachment site PI861_08260 PF00975 Thioesterase domain PI861_08260 PF00501 AMP-binding enzyme PI861_08265 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PI861_08270 PF00501 AMP-binding enzyme PI861_08270 PF13193 AMP-binding enzyme C-terminal domain PI861_08270 PF00550 Phosphopantetheine attachment site PI861_08270 PF00668 Condensation domain PI861_08275 PF00550 Phosphopantetheine attachment site PI861_08275 PF00668 Condensation domain PI861_08275 PF00501 AMP-binding enzyme PI861_08285 PF00282 Pyridoxal-dependent decarboxylase conserved domain PI861_08290 PF10396 GTP-binding protein TrmE N-terminus PI861_08290 PF12631 MnmE helical domain PI861_08290 PF01926 50S ribosome-binding GTPase PI861_08295 PF02096 60Kd inner membrane protein PI861_08295 PF14849 YidC periplasmic domain PI861_08300 PF01809 Putative membrane protein insertion efficiency factor PI861_08305 PF00825 Ribonuclease P PI861_08310 PF00468 Ribosomal protein L34 PI861_08315 PF00005 ABC transporter PI861_08320 PF00528 Binding-protein-dependent transport system inner membrane component PI861_08325 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_08330 PF11638 DnaA N-terminal domain PI861_08330 PF00308 Bacterial dnaA protein PI861_08330 PF08299 Bacterial dnaA protein helix-turn-helix PI861_08335 PF02767 DNA polymerase III beta subunit, central domain PI861_08335 PF02768 DNA polymerase III beta subunit, C-terminal domain PI861_08335 PF00712 DNA polymerase III beta subunit, N-terminal domain PI861_08340 PF02463 RecF/RecN/SMC N terminal domain PI861_08345 PF01751 Toprim domain PI861_08345 PF00204 DNA gyrase B PI861_08345 PF00986 DNA gyrase B subunit, carboxyl terminus PI861_08345 PF18053 DNA gyrase B subunit insert domain PI861_08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_08360 PF13280 WYL domain PI861_08360 PF08279 HTH domain PI861_08365 PF00011 Hsp20/alpha crystallin family PI861_08370 PF00011 Hsp20/alpha crystallin family PI861_08395 PF00155 Aminotransferase class I and II PI861_08420 PF00072 Response regulator receiver domain PI861_08420 PF00486 Transcriptional regulatory protein, C terminal PI861_08425 PF13493 Domain of unknown function (DUF4118) PI861_08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_08425 PF00512 His Kinase A (phospho-acceptor) domain PI861_08425 PF02702 Osmosensitive K+ channel His kinase sensor domain PI861_08425 PF13492 GAF domain PI861_08430 PF02669 K+-transporting ATPase, c chain PI861_08440 PF03814 Potassium-transporting ATPase A subunit PI861_08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_08445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PI861_08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_08450 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_08450 PF00512 His Kinase A (phospho-acceptor) domain PI861_08455 PF00873 AcrB/AcrD/AcrF family PI861_08460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_08465 PF00440 Bacterial regulatory proteins, tetR family PI861_08500 PF12146 Serine aminopeptidase, S33 PI861_08505 PF12105 SpoU, rRNA methylase, C-terminal PI861_08505 PF00588 SpoU rRNA Methylase family PI861_08510 PF02824 TGS domain PI861_08510 PF13291 ACT domain PI861_08510 PF04607 Region found in RelA / SpoT proteins PI861_08515 PF01192 RNA polymerase Rpb6 PI861_08520 PF00625 Guanylate kinase PI861_08525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PI861_08540 PF00892 EamA-like transporter family PI861_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_08560 PF03466 LysR substrate binding domain PI861_08565 PF00579 tRNA synthetases class I (W and Y) PI861_08570 PF00582 Universal stress protein family PI861_08575 PF12241 Trans-2-enoyl-CoA reductase catalytic region PI861_08575 PF07055 Enoyl reductase FAD binding domain PI861_08575 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PI861_08580 PF00990 Diguanylate cyclase, GGDEF domain PI861_08580 PF08448 PAS fold PI861_08590 PF00210 Ferritin-like domain PI861_08600 PF01810 LysE type translocator PI861_08625 PF15976 CS1-pili formation C-terminal PI861_08625 PF16967 E-set like domain PI861_08645 PF00665 Integrase core domain PI861_08650 PF01695 IstB-like ATP binding protein PI861_08655 PF18649 EcpB C-terminal domain PI861_08660 PF16449 Fimbrillin MatB PI861_08665 PF00196 Bacterial regulatory proteins, luxR family PI861_08665 PF00072 Response regulator receiver domain PI861_08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_08670 PF00512 His Kinase A (phospho-acceptor) domain PI861_08670 PF00989 PAS fold PI861_08670 PF00072 Response regulator receiver domain PI861_08670 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_08670 PF01627 Hpt domain PI861_08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_08680 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_08680 PF00072 Response regulator receiver domain PI861_08680 PF00989 PAS fold PI861_08680 PF01627 Hpt domain PI861_08680 PF00512 His Kinase A (phospho-acceptor) domain PI861_08690 PF06580 Histidine kinase PI861_08690 PF07694 5TMR of 5TMR-LYT PI861_08690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_08695 PF00072 Response regulator receiver domain PI861_08695 PF04397 LytTr DNA-binding domain PI861_08700 PF07690 Major Facilitator Superfamily PI861_08705 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PI861_08705 PF02222 ATP-grasp domain PI861_08710 PF00731 AIR carboxylase PI861_08725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_08725 PF03466 LysR substrate binding domain PI861_08730 PF07715 TonB-dependent Receptor Plug Domain PI861_08730 PF00593 TonB dependent receptor PI861_08735 PF01177 Asp/Glu/Hydantoin racemase PI861_08765 PF13380 CoA binding domain PI861_08765 PF00583 Acetyltransferase (GNAT) family PI861_08765 PF13607 Succinyl-CoA ligase like flavodoxin domain PI861_08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_08780 PF03466 LysR substrate binding domain PI861_08785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PI861_08785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PI861_08790 PF00342 Phosphoglucose isomerase PI861_08800 PF05552 Conserved TM helix PI861_08800 PF00924 Mechanosensitive ion channel PI861_08805 PF00440 Bacterial regulatory proteins, tetR family PI861_08810 PF00692 dUTPase PI861_08815 PF04127 DNA / pantothenate metabolism flavoprotein PI861_08815 PF02441 Flavoprotein PI861_08820 PF04002 RadC-like JAB domain PI861_08825 PF00830 Ribosomal L28 family PI861_08830 PF00471 Ribosomal protein L33 PI861_08840 PF06827 Zinc finger found in FPG and IleRS PI861_08840 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PI861_08840 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PI861_08845 PF04393 Protein of unknown function (DUF535) PI861_08850 PF01467 Cytidylyltransferase-like PI861_08855 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PI861_08860 PF00535 Glycosyl transferase family 2 PI861_08865 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PI861_08870 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PI861_08875 PF03611 PTS system sugar-specific permease component PI861_08885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI861_08890 PF00356 Bacterial regulatory proteins, lacI family PI861_08890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI861_08915 PF03748 Flagellar basal body-associated protein FliL PI861_08920 PF04345 Chorismate lyase PI861_08925 PF01040 UbiA prenyltransferase family PI861_08930 PF01553 Acyltransferase PI861_08935 PF01726 LexA DNA binding domain PI861_08935 PF00717 Peptidase S24-like PI861_08945 PF02630 SCO1/SenC PI861_08955 PF00588 SpoU rRNA Methylase family PI861_08960 PF16527 Two-component sensor protein CpxA, periplasmic domain PI861_08960 PF00672 HAMP domain PI861_08960 PF00512 His Kinase A (phospho-acceptor) domain PI861_08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_08965 PF00072 Response regulator receiver domain PI861_08965 PF00486 Transcriptional regulatory protein, C terminal PI861_08970 PF16916 Dimerisation domain of Zinc Transporter PI861_08970 PF01545 Cation efflux family PI861_08975 PF00132 Bacterial transferase hexapeptide (six repeats) PI861_08975 PF06426 Serine acetyltransferase, N-terminal PI861_08985 PF06005 Cell division protein ZapB PI861_08995 PF01367 5'-3' exonuclease, C-terminal SAM fold PI861_08995 PF01612 3'-5' exonuclease PI861_08995 PF00476 DNA polymerase family A PI861_08995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PI861_09000 PF00132 Bacterial transferase hexapeptide (six repeats) PI861_09050 PF13593 SBF-like CPA transporter family (DUF4137) PI861_09055 PF12867 DinB superfamily PI861_09055 PF03781 Sulfatase-modifying factor enzyme 1 PI861_09065 PF00756 Putative esterase PI861_09070 PF00107 Zinc-binding dehydrogenase PI861_09070 PF08240 Alcohol dehydrogenase GroES-like domain PI861_09075 PF03466 LysR substrate binding domain PI861_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_09080 PF02653 Branched-chain amino acid transport system / permease component PI861_09085 PF02653 Branched-chain amino acid transport system / permease component PI861_09090 PF00005 ABC transporter PI861_09100 PF02608 ABC transporter substrate-binding protein PnrA-like PI861_09105 PF13361 UvrD-like helicase C-terminal domain PI861_09105 PF00580 UvrD/REP helicase N-terminal domain PI861_09145 PF04972 BON domain PI861_09165 PF03466 LysR substrate binding domain PI861_09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_09170 PF01810 LysE type translocator PI861_09175 PF04143 Sulphur transport PI861_09180 PF00689 Cation transporting ATPase, C-terminus PI861_09180 PF00690 Cation transporter/ATPase, N-terminus PI861_09185 PF01810 LysE type translocator PI861_09190 PF12833 Helix-turn-helix domain PI861_09195 PF00892 EamA-like transporter family PI861_09205 PF00171 Aldehyde dehydrogenase family PI861_09210 PF01381 Helix-turn-helix PI861_09215 PF00202 Aminotransferase class-III PI861_09220 PF00171 Aldehyde dehydrogenase family PI861_09225 PF00117 Glutamine amidotransferase class-I PI861_09225 PF00958 GMP synthase C terminal domain PI861_09225 PF02540 NAD synthase PI861_09230 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PI861_09230 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PI861_09235 PF00294 pfkB family carbohydrate kinase PI861_09240 PF02082 Transcriptional regulator PI861_09255 PF02646 RmuC family PI861_09260 PF02386 Cation transport protein PI861_09265 PF02080 TrkA-C domain PI861_09265 PF02254 TrkA-N domain PI861_09270 PF01029 NusB family PI861_09270 PF01189 16S rRNA methyltransferase RsmB/F PI861_09275 PF00551 Formyl transferase PI861_09275 PF02911 Formyl transferase, C-terminal domain PI861_09280 PF01327 Polypeptide deformylase PI861_09285 PF01476 LysM domain PI861_09290 PF17782 DprA winged helix domain PI861_09290 PF02481 DNA recombination-mediator protein A PI861_09295 PF04361 Protein of unknown function (DUF494) PI861_09300 PF01396 Topoisomerase DNA binding C4 zinc finger PI861_09305 PF00731 AIR carboxylase PI861_09310 PF01300 Telomere recombination PI861_09315 PF01218 Coproporphyrinogen III oxidase PI861_09320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PI861_09320 PF01488 Shikimate / quinate 5-dehydrogenase PI861_09320 PF08501 Shikimate dehydrogenase substrate binding domain PI861_09325 PF07369 Protein of unknown function (DUF1488) PI861_09330 PF01926 50S ribosome-binding GTPase PI861_09335 PF00034 Cytochrome c PI861_09340 PF04220 Der GTPase activator (YihI) PI861_09345 PF10675 Protein of unknown function (DUF2489) PI861_09350 PF04055 Radical SAM superfamily PI861_09350 PF06969 HemN C-terminal domain PI861_09355 PF00962 Adenosine/AMP deaminase PI861_09360 PF02954 Bacterial regulatory protein, Fis family PI861_09360 PF00072 Response regulator receiver domain PI861_09360 PF00158 Sigma-54 interaction domain PI861_09365 PF00989 PAS fold PI861_09365 PF00512 His Kinase A (phospho-acceptor) domain PI861_09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_09375 PF00120 Glutamine synthetase, catalytic domain PI861_09375 PF03951 Glutamine synthetase, beta-Grasp domain PI861_09380 PF00679 Elongation factor G C-terminus PI861_09380 PF00009 Elongation factor Tu GTP binding domain PI861_09380 PF03144 Elongation factor Tu domain 2 PI861_09385 PF03631 Virulence factor BrkB PI861_09400 PF00583 Acetyltransferase (GNAT) family PI861_09400 PF09500 Putative thioesterase (yiiD_Cterm) PI861_09410 PF00270 DEAD/DEAH box helicase PI861_09410 PF00271 Helicase conserved C-terminal domain PI861_09410 PF17191 RecG wedge domain PI861_09415 PF13091 PLD-like domain PI861_09420 PF02447 GntP family permease PI861_09425 PF01202 Shikimate kinase PI861_09430 PF00920 Dehydratase family PI861_09435 PF01081 KDPG and KHG aldolase PI861_09440 PF00356 Bacterial regulatory proteins, lacI family PI861_09440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI861_09450 PF01551 Peptidase family M23 PI861_09455 PF01676 Metalloenzyme superfamily PI861_09455 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PI861_09460 PF00581 Rhodanese-like domain PI861_09465 PF02556 Preprotein translocase subunit SecB PI861_09470 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PI861_09470 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PI861_09475 PF01521 Iron-sulphur cluster biosynthesis PI861_09475 PF01106 NifU-like domain PI861_09480 PF00156 Phosphoribosyl transferase domain PI861_09485 PF00561 alpha/beta hydrolase fold PI861_09505 PF17674 HHH domain PI861_09505 PF00575 S1 RNA binding domain PI861_09505 PF09371 Tex-like protein N-terminal domain PI861_09505 PF16921 Tex protein YqgF-like domain PI861_09510 PF03449 Transcription elongation factor, N-terminal PI861_09510 PF01272 Transcription elongation factor, GreA/GreB, C-term PI861_09515 PF00486 Transcriptional regulatory protein, C terminal PI861_09515 PF00072 Response regulator receiver domain PI861_09520 PF00512 His Kinase A (phospho-acceptor) domain PI861_09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_09520 PF00672 HAMP domain PI861_09530 PF00338 Ribosomal protein S10p/S20e PI861_09535 PF00297 Ribosomal protein L3 PI861_09540 PF00573 Ribosomal protein L4/L1 family PI861_09545 PF00276 Ribosomal protein L23 PI861_09550 PF00181 Ribosomal Proteins L2, RNA binding domain PI861_09550 PF03947 Ribosomal Proteins L2, C-terminal domain PI861_09555 PF00203 Ribosomal protein S19 PI861_09560 PF00237 Ribosomal protein L22p/L17e PI861_09565 PF07650 KH domain PI861_09565 PF00189 Ribosomal protein S3, C-terminal domain PI861_09570 PF00252 Ribosomal protein L16p/L10e PI861_09575 PF00831 Ribosomal L29 protein PI861_09580 PF00366 Ribosomal protein S17 PI861_09585 PF00238 Ribosomal protein L14p/L23e PI861_09590 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PI861_09595 PF00281 Ribosomal protein L5 PI861_09595 PF00673 ribosomal L5P family C-terminus PI861_09600 PF00253 Ribosomal protein S14p/S29e PI861_09605 PF00410 Ribosomal protein S8 PI861_09610 PF00347 Ribosomal protein L6 PI861_09615 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PI861_09620 PF00333 Ribosomal protein S5, N-terminal domain PI861_09620 PF03719 Ribosomal protein S5, C-terminal domain PI861_09625 PF00327 Ribosomal protein L30p/L7e PI861_09630 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PI861_09635 PF00344 SecY translocase PI861_09640 PF00444 Ribosomal protein L36 PI861_09645 PF00416 Ribosomal protein S13/S18 PI861_09650 PF00411 Ribosomal protein S11 PI861_09655 PF00163 Ribosomal protein S4/S9 N-terminal domain PI861_09655 PF01479 S4 domain PI861_09660 PF01000 RNA polymerase Rpb3/RpoA insert domain PI861_09660 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PI861_09660 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PI861_09665 PF01196 Ribosomal protein L17 PI861_09715 PF01695 IstB-like ATP binding protein PI861_09720 PF00665 Integrase core domain PI861_09730 PF02733 Dak1 domain PI861_09735 PF02734 DAK2 domain PI861_09740 PF03610 PTS system fructose IIA component PI861_09740 PF05524 PEP-utilising enzyme, N-terminal PI861_09740 PF00391 PEP-utilising enzyme, mobile domain PI861_09740 PF00381 PTS HPr component phosphorylation site PI861_09745 PF00465 Iron-containing alcohol dehydrogenase PI861_09750 PF00158 Sigma-54 interaction domain PI861_09750 PF00989 PAS fold PI861_09750 PF02954 Bacterial regulatory protein, Fis family PI861_09755 PF01594 AI-2E family transporter PI861_09760 PF00293 NUDIX domain PI861_09785 PF00199 Catalase PI861_09785 PF06628 Catalase-related immune-responsive PI861_09810 PF00990 Diguanylate cyclase, GGDEF domain PI861_09820 PF00005 ABC transporter PI861_09820 PF08402 TOBE domain PI861_09830 PF00528 Binding-protein-dependent transport system inner membrane component PI861_09845 PF00392 Bacterial regulatory proteins, gntR family PI861_09845 PF07702 UTRA domain PI861_09865 PF17954 Quercetinase C-terminal cupin domain PI861_09865 PF02678 Pirin PI861_09870 PF07681 DoxX PI861_09875 PF17946 RecC C-terminal domain PI861_09880 PF12705 PD-(D/E)XK nuclease superfamily PI861_09880 PF13361 UvrD-like helicase C-terminal domain PI861_09880 PF00580 UvrD/REP helicase N-terminal domain PI861_09885 PF13538 UvrD-like helicase C-terminal domain PI861_09895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI861_09910 PF00909 Ammonium Transporter Family PI861_09915 PF00543 Nitrogen regulatory protein P-II PI861_09920 PF00990 Diguanylate cyclase, GGDEF domain PI861_09920 PF00072 Response regulator receiver domain PI861_09930 PF02743 Cache domain PI861_09930 PF00672 HAMP domain PI861_09930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_09950 PF00486 Transcriptional regulatory protein, C terminal PI861_09950 PF00072 Response regulator receiver domain PI861_09955 PF00512 His Kinase A (phospho-acceptor) domain PI861_09955 PF00672 HAMP domain PI861_09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_09960 PF00990 Diguanylate cyclase, GGDEF domain PI861_09965 PF07715 TonB-dependent Receptor Plug Domain PI861_09965 PF00593 TonB dependent receptor PI861_09970 PF00313 'Cold-shock' DNA-binding domain PI861_09975 PF08448 PAS fold PI861_09975 PF00990 Diguanylate cyclase, GGDEF domain PI861_09980 PF17755 UvrA DNA-binding domain PI861_09980 PF17760 UvrA interaction domain PI861_09980 PF00005 ABC transporter PI861_09985 PF00196 Bacterial regulatory proteins, luxR family PI861_09990 PF00436 Single-strand binding protein family PI861_10005 PF16916 Dimerisation domain of Zinc Transporter PI861_10005 PF01545 Cation efflux family PI861_10035 PF02254 TrkA-N domain PI861_10035 PF00999 Sodium/hydrogen exchanger family PI861_10040 PF02525 Flavodoxin-like fold PI861_10055 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PI861_10055 PF00326 Prolyl oligopeptidase family PI861_10075 PF07947 YhhN family PI861_10080 PF07690 Major Facilitator Superfamily PI861_10085 PF13533 Biotin-lipoyl like PI861_10100 PF00375 Sodium:dicarboxylate symporter family PI861_10105 PF10678 Protein of unknown function (DUF2492) PI861_10110 PF01914 MarC family integral membrane protein PI861_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_10115 PF03466 LysR substrate binding domain PI861_10120 PF02416 mttA/Hcf106 family PI861_10130 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_10130 PF01464 Transglycosylase SLT domain PI861_10140 PF13091 PLD-like domain PI861_10150 PF00440 Bacterial regulatory proteins, tetR family PI861_10170 PF00448 SRP54-type protein, GTPase domain PI861_10170 PF02881 SRP54-type protein, helical bundle domain PI861_10175 PF00005 ABC transporter PI861_10180 PF18075 FtsX extracellular domain PI861_10185 PF04545 Sigma-70, region 4 PI861_10185 PF04542 Sigma-70 region 2 PI861_10185 PF00140 Sigma-70 factor, region 1.2 PI861_10190 PF00484 Carbonic anhydrase PI861_10195 PF00392 Bacterial regulatory proteins, gntR family PI861_10195 PF07702 UTRA domain PI861_10200 PF01979 Amidohydrolase family PI861_10205 PF00491 Arginase family PI861_10210 PF01175 Urocanase Rossmann-like domain PI861_10210 PF17392 Urocanase C-terminal domain PI861_10210 PF17391 Urocanase N-terminal domain PI861_10215 PF00221 Aromatic amino acid lyase PI861_10220 PF01699 Sodium/calcium exchanger protein PI861_10230 PF00563 EAL domain PI861_10230 PF17157 Gammaproteobacterial periplasmic sensor domain PI861_10230 PF00990 Diguanylate cyclase, GGDEF domain PI861_10260 PF00263 Bacterial type II and III secretion system protein PI861_10260 PF03958 Bacterial type II/III secretion system short domain PI861_10295 PF04085 rod shape-determining protein MreC PI861_10300 PF04093 rod shape-determining protein MreD PI861_10305 PF02545 Maf-like protein PI861_10310 PF10150 Ribonuclease E/G family PI861_10310 PF00575 S1 RNA binding domain PI861_10315 PF13502 AsmA-like C-terminal region PI861_10315 PF13116 Protein of unknown function PI861_10325 PF00795 Carbon-nitrogen hydrolase PI861_10330 PF01523 Putative modulator of DNA gyrase PI861_10340 PF01914 MarC family integral membrane protein PI861_10355 PF00072 Response regulator receiver domain PI861_10360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI861_10360 PF00072 Response regulator receiver domain PI861_10360 PF01627 Hpt domain PI861_10360 PF00672 HAMP domain PI861_10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_10360 PF00512 His Kinase A (phospho-acceptor) domain PI861_10365 PF13581 Histidine kinase-like ATPase domain PI861_10370 PF08678 Rsbr N terminal PI861_10370 PF01740 STAS domain PI861_10375 PF13426 PAS domain PI861_10375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_10375 PF08447 PAS fold PI861_10380 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) PI861_10390 PF08668 HDOD domain PI861_10405 PF00999 Sodium/hydrogen exchanger family PI861_10410 PF02965 Vitamin B12 dependent methionine synthase, activation domain PI861_10410 PF02607 B12 binding domain PI861_10410 PF02574 Homocysteine S-methyltransferase PI861_10410 PF00809 Pterin binding enzyme PI861_10410 PF02310 B12 binding domain PI861_10415 PF18030 RimK PreATP-grasp domain PI861_10415 PF08443 RimK-like ATP-grasp domain PI861_10420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_10425 PF00486 Transcriptional regulatory protein, C terminal PI861_10425 PF00072 Response regulator receiver domain PI861_10440 PF03440 Aerolysin/Pertussis toxin (APT) domain PI861_10440 PF01117 Aerolysin toxin PI861_10445 PF01964 Radical SAM ThiC family PI861_10445 PF13667 ThiC-associated domain PI861_10450 PF02581 Thiamine monophosphate synthase PI861_10455 PF00899 ThiF family PI861_10465 PF05690 Thiazole biosynthesis protein ThiG PI861_10470 PF06968 Biotin and Thiamin Synthesis associated domain PI861_10470 PF04055 Radical SAM superfamily PI861_10490 PF00132 Bacterial transferase hexapeptide (six repeats) PI861_10495 PF13036 Peptidoglycan-synthase activator LpoB PI861_10515 PF06055 Exopolysaccharide synthesis, ExoD PI861_10525 PF08803 Putative mono-oxygenase ydhR PI861_10530 PF01638 HxlR-like helix-turn-helix PI861_10555 PF07715 TonB-dependent Receptor Plug Domain PI861_10555 PF00593 TonB dependent receptor PI861_10570 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded PI861_10585 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase PI861_10590 PF02602 Uroporphyrinogen-III synthase HemD PI861_10595 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PI861_10595 PF03900 Porphobilinogen deaminase, C-terminal domain PI861_10600 PF12633 Adenylate cyclase NT domain PI861_10600 PF01295 Adenylate cyclase, class-I PI861_10610 PF13358 DDE superfamily endonuclease PI861_10610 PF13592 Winged helix-turn helix PI861_10620 PF01491 Frataxin-like domain PI861_10630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PI861_10630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PI861_10635 PF01678 Diaminopimelate epimerase PI861_10645 PF02899 Phage integrase, N-terminal SAM-like domain PI861_10645 PF00589 Phage integrase family PI861_10650 PF13419 Haloacid dehalogenase-like hydrolase PI861_10660 PF00924 Mechanosensitive ion channel PI861_10670 PF07722 Peptidase C26 PI861_10690 PF00005 ABC transporter PI861_10700 PF00994 Probable molybdopterin binding domain PI861_10700 PF02464 Competence-damaged protein PI861_10705 PF01966 HD domain PI861_10705 PF00013 KH domain PI861_10705 PF12072 Domain of unknown function (DUF3552) PI861_10710 PF04204 Homoserine O-succinyltransferase PI861_10720 PF01037 Lrp/AsnC ligand binding domain PI861_10725 PF00884 Sulfatase PI861_10740 PF00128 Alpha amylase, catalytic domain PI861_10740 PF02903 Alpha amylase, N-terminal ig-like domain PI861_10740 PF16657 Maltogenic Amylase, C-terminal domain PI861_10745 PF02308 MgtC family PI861_10765 PF00106 short chain dehydrogenase PI861_10770 PF03577 Peptidase family C69 PI861_10785 PF00465 Iron-containing alcohol dehydrogenase PI861_10795 PF01053 Cys/Met metabolism PLP-dependent enzyme PI861_10805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_10805 PF12793 Sugar transport-related sRNA regulator N-term PI861_10810 PF00141 Peroxidase PI861_10825 PF03280 Proteobacterial lipase chaperone protein PI861_10830 PF00561 alpha/beta hydrolase fold PI861_10840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PI861_10840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PI861_10845 PF02698 DUF218 domain PI861_10850 PF01752 Collagenase PI861_10850 PF08453 Peptidase family M9 N-terminal PI861_10860 PF00419 Fimbrial protein PI861_10870 PF13954 PapC N-terminal domain PI861_10870 PF00577 Outer membrane usher protein PI861_10870 PF13953 PapC C-terminal domain PI861_10875 PF02753 Pili assembly chaperone PapD, C-terminal domain PI861_10875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PI861_10880 PF00419 Fimbrial protein PI861_10885 PF00419 Fimbrial protein PI861_10895 PF00486 Transcriptional regulatory protein, C terminal PI861_10895 PF00072 Response regulator receiver domain PI861_10900 PF00501 AMP-binding enzyme PI861_10905 PF13378 Enolase C-terminal domain-like PI861_10910 PF00378 Enoyl-CoA hydratase/isomerase PI861_10915 PF12697 Alpha/beta hydrolase family PI861_10920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PI861_10920 PF16582 Middle domain of thiamine pyrophosphate PI861_10920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PI861_10925 PF00425 chorismate binding enzyme PI861_10930 PF01040 UbiA prenyltransferase family PI861_10960 PF00271 Helicase conserved C-terminal domain PI861_10960 PF03880 DbpA RNA binding domain PI861_10960 PF00270 DEAD/DEAH box helicase PI861_10965 PF07670 Nucleoside recognition PI861_10965 PF07662 Na+ dependent nucleoside transporter C-terminus PI861_10965 PF01773 Na+ dependent nucleoside transporter N-terminus PI861_10970 PF04307 LexA-binding, inner membrane-associated putative hydrolase PI861_10985 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PI861_10990 PF01544 CorA-like Mg2+ transporter protein PI861_11005 PF00226 DnaJ domain PI861_11005 PF01556 DnaJ C terminal domain PI861_11005 PF00684 DnaJ central domain PI861_11010 PF03471 Transporter associated domain PI861_11010 PF00999 Sodium/hydrogen exchanger family PI861_11010 PF02080 TrkA-C domain PI861_11015 PF05068 Mannitol repressor PI861_11020 PF08125 Mannitol dehydrogenase C-terminal domain PI861_11020 PF01232 Mannitol dehydrogenase Rossmann domain PI861_11025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI861_11025 PF02378 Phosphotransferase system, EIIC PI861_11025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI861_11040 PF17876 Cold shock domain PI861_11040 PF08206 Ribonuclease B OB domain PI861_11040 PF00773 RNB domain PI861_11045 PF03466 LysR substrate binding domain PI861_11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_11050 PF00765 Autoinducer synthase PI861_11055 PF00196 Bacterial regulatory proteins, luxR family PI861_11055 PF03472 Autoinducer binding domain PI861_11060 PF01810 LysE type translocator PI861_11065 PF02872 5'-nucleotidase, C-terminal domain PI861_11065 PF00149 Calcineurin-like phosphoesterase PI861_11070 PF05433 Glycine zipper 2TM domain PI861_11075 PF00583 Acetyltransferase (GNAT) family PI861_11080 PF11756 Nitrous oxide-stimulated promoter PI861_11085 PF00557 Metallopeptidase family M24 PI861_11085 PF01321 Creatinase/Prolidase N-terminal domain PI861_11090 PF00392 Bacterial regulatory proteins, gntR family PI861_11095 PF01293 Phosphoenolpyruvate carboxykinase PI861_11100 PF01430 Hsp33 protein PI861_11105 PF01479 S4 domain PI861_11110 PF11356 Type II secretion system protein C PI861_11115 PF00263 Bacterial type II and III secretion system protein PI861_11115 PF03958 Bacterial type II/III secretion system short domain PI861_11120 PF00437 Type II/IV secretion system protein PI861_11125 PF00482 Type II secretion system (T2SS), protein F PI861_11130 PF07963 Prokaryotic N-terminal methylation motif PI861_11130 PF08334 Type II secretion system (T2SS), protein G PI861_11135 PF12019 Type II transport protein GspH PI861_11135 PF07963 Prokaryotic N-terminal methylation motif PI861_11140 PF07963 Prokaryotic N-terminal methylation motif PI861_11140 PF02501 Type II secretion system (T2SS), protein I PI861_11145 PF11612 Type II secretion system (T2SS), protein J PI861_11145 PF07963 Prokaryotic N-terminal methylation motif PI861_11150 PF03934 Type II secretion system (T2SS), protein K PI861_11155 PF12693 GspL periplasmic domain PI861_11155 PF05134 Type II secretion system (T2SS), protein L PI861_11160 PF04612 Type II secretion system (T2SS), protein M PI861_11165 PF01203 Type II secretion system (T2SS), protein N PI861_11170 PF00196 Bacterial regulatory proteins, luxR family PI861_11175 PF01479 S4 domain PI861_11175 PF00579 tRNA synthetases class I (W and Y) PI861_11180 PF13419 Haloacid dehalogenase-like hydrolase PI861_11185 PF00293 NUDIX domain PI861_11190 PF00459 Inositol monophosphatase family PI861_11195 PF03222 Tryptophan/tyrosine permease family PI861_11200 PF01588 Putative tRNA binding domain PI861_11205 PF02311 AraC-like ligand binding domain PI861_11205 PF12833 Helix-turn-helix domain PI861_11210 PF01340 Met Apo-repressor, MetJ PI861_11215 PF01053 Cys/Met metabolism PLP-dependent enzyme PI861_11220 PF00696 Amino acid kinase family PI861_11220 PF00742 Homoserine dehydrogenase PI861_11220 PF03447 Homoserine dehydrogenase, NAD binding domain PI861_11235 PF04172 LrgB-like family PI861_11240 PF03788 LrgA family PI861_11255 PF00392 Bacterial regulatory proteins, gntR family PI861_11255 PF00155 Aminotransferase class I and II PI861_11275 PF04073 Aminoacyl-tRNA editing domain PI861_11280 PF02464 Competence-damaged protein PI861_11285 PF00154 recA bacterial DNA recombination protein PI861_11290 PF02631 RecX family PI861_11295 PF02272 DHHA1 domain PI861_11295 PF01411 tRNA synthetases class II (A) PI861_11295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PI861_11300 PF00696 Amino acid kinase family PI861_11300 PF01842 ACT domain PI861_11300 PF13840 ACT domain PI861_11305 PF02599 Global regulator protein family PI861_11330 PF00768 D-alanyl-D-alanine carboxypeptidase PI861_11335 PF09335 SNARE associated Golgi protein PI861_11340 PF01595 Cyclin M transmembrane N-terminal domain PI861_11340 PF00571 CBS domain PI861_11340 PF03471 Transporter associated domain PI861_11345 PF08264 Anticodon-binding domain of tRNA PI861_11345 PF00133 tRNA synthetases class I (I, L, M and V) PI861_11345 PF10458 Valyl tRNA synthetase tRNA binding arm PI861_11350 PF04364 DNA polymerase III chi subunit, HolC PI861_11355 PF00883 Cytosol aminopeptidase family, catalytic domain PI861_11355 PF02789 Cytosol aminopeptidase family, N-terminal domain PI861_11360 PF03739 Lipopolysaccharide export system permease LptF/LptG PI861_11365 PF03739 Lipopolysaccharide export system permease LptF/LptG PI861_11585 PF06892 Phage regulatory protein CII (CP76) PI861_11595 PF01381 Helix-turn-helix PI861_11595 PF00717 Peptidase S24-like PI861_11600 PF00589 Phage integrase family PI861_11600 PF02899 Phage integrase, N-terminal SAM-like domain PI861_11605 PF13356 Arm DNA-binding domain PI861_11605 PF00589 Phage integrase family PI861_11610 PF13358 DDE superfamily endonuclease PI861_11610 PF13592 Winged helix-turn helix PI861_11625 PF10548 P22AR C-terminal domain PI861_11625 PF08346 AntA/AntB antirepressor PI861_11645 PF08401 Domain of unknown function (DUF1738) PI861_11645 PF18818 Metallopeptidase superfamily domain PI861_11645 PF13362 Toprim domain PI861_11670 PF02661 Fic/DOC family PI861_11670 PF13784 Fic/DOC family N-terminal PI861_11675 PF00909 Ammonium Transporter Family PI861_11680 PF01938 TRAM domain PI861_11680 PF05958 tRNA (Uracil-5-)-methyltransferase PI861_11685 PF00583 Acetyltransferase (GNAT) family PI861_11695 PF07963 Prokaryotic N-terminal methylation motif PI861_11700 PF01026 TatD related DNase PI861_11705 PF01773 Na+ dependent nucleoside transporter N-terminus PI861_11705 PF07662 Na+ dependent nucleoside transporter C-terminus PI861_11705 PF07670 Nucleoside recognition PI861_11715 PF01791 DeoC/LacD family aldolase PI861_11720 PF00591 Glycosyl transferase family, a/b domain PI861_11720 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PI861_11720 PF02885 Glycosyl transferase family, helical bundle domain PI861_11725 PF01676 Metalloenzyme superfamily PI861_11730 PF01048 Phosphorylase superfamily PI861_11740 PF18429 Domain of unknown function (DUF5609) PI861_11755 PF18073 Rubredoxin metal binding domain PI861_11760 PF07238 PilZ domain PI861_11765 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PI861_11770 PF00216 Bacterial DNA-binding protein PI861_11785 PF01207 Dihydrouridine synthase (Dus) PI861_11790 PF01475 Ferric uptake regulator family PI861_11805 PF05525 Branched-chain amino acid transport protein PI861_11810 PF05175 Methyltransferase small domain PI861_11815 PF00271 Helicase conserved C-terminal domain PI861_11815 PF00270 DEAD/DEAH box helicase PI861_11820 PF03883 Peroxide stress protein YaaA PI861_11825 PF00437 Type II/IV secretion system protein PI861_11830 PF00437 Type II/IV secretion system protein PI861_11835 PF01168 Alanine racemase, N-terminal domain PI861_11840 PF14748 Pyrroline-5-carboxylate reductase dimerisation PI861_11840 PF03807 NADP oxidoreductase coenzyme F420-dependent PI861_11845 PF02325 YGGT family PI861_11850 PF02594 Uncharacterised ACR, YggU family COG1872 PI861_11865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_11875 PF00132 Bacterial transferase hexapeptide (six repeats) PI861_11880 PF10952 Protein of unknown function (DUF2753) PI861_11885 PF00378 Enoyl-CoA hydratase/isomerase PI861_11900 PF00106 short chain dehydrogenase PI861_11905 PF03466 LysR substrate binding domain PI861_11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_11910 PF04371 Porphyromonas-type peptidyl-arginine deiminase PI861_11915 PF01425 Amidase PI861_11925 PF00753 Metallo-beta-lactamase superfamily PI861_11935 PF00270 DEAD/DEAH box helicase PI861_11935 PF00271 Helicase conserved C-terminal domain PI861_11940 PF03466 LysR substrate binding domain PI861_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_11955 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase PI861_11975 PF00445 Ribonuclease T2 family PI861_11985 PF03060 Nitronate monooxygenase PI861_12020 PF00293 NUDIX domain PI861_12020 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PI861_12020 PF09297 NADH pyrophosphatase zinc ribbon domain PI861_12025 PF16527 Two-component sensor protein CpxA, periplasmic domain PI861_12025 PF00672 HAMP domain PI861_12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_12025 PF00512 His Kinase A (phospho-acceptor) domain PI861_12030 PF00072 Response regulator receiver domain PI861_12030 PF00486 Transcriptional regulatory protein, C terminal PI861_12035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_12040 PF02687 FtsX-like permease family PI861_12040 PF00005 ABC transporter PI861_12040 PF12704 MacB-like periplasmic core domain PI861_12045 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PI861_12045 PF00326 Prolyl oligopeptidase family PI861_12050 PF05170 AsmA family PI861_12070 PF08335 GlnD PII-uridylyltransferase PI861_12070 PF03710 Glutamate-ammonia ligase adenylyltransferase PI861_12075 PF03608 PTS system enzyme II sorbitol-specific factor PI861_12080 PF03612 Sorbitol phosphotransferase enzyme II N-terminus PI861_12080 PF07663 Sorbitol phosphotransferase enzyme II C-terminus PI861_12085 PF03829 PTS system glucitol/sorbitol-specific IIA component PI861_12090 PF00106 short chain dehydrogenase PI861_12100 PF08220 DeoR-like helix-turn-helix domain PI861_12100 PF00455 DeoR C terminal sensor domain PI861_12105 PF08335 GlnD PII-uridylyltransferase PI861_12105 PF03710 Glutamate-ammonia ligase adenylyltransferase PI861_12120 PF00293 NUDIX domain PI861_12125 PF16884 N-terminal domain of oxidoreductase PI861_12125 PF00107 Zinc-binding dehydrogenase PI861_12130 PF02566 OsmC-like protein PI861_12135 PF01047 MarR family PI861_12150 PF01037 Lrp/AsnC ligand binding domain PI861_12160 PF07690 Major Facilitator Superfamily PI861_12180 PF00209 Sodium:neurotransmitter symporter family PI861_12190 PF00209 Sodium:neurotransmitter symporter family PI861_12225 PF01810 LysE type translocator PI861_12230 PF01177 Asp/Glu/Hydantoin racemase PI861_12240 PF04074 YhcH/YjgK/YiaL PI861_12245 PF00871 Acetokinase family PI861_12250 PF00924 Mechanosensitive ion channel PI861_12255 PF17969 L,D-transpeptidase C-terminal domain PI861_12255 PF03734 L,D-transpeptidase catalytic domain PI861_12260 PF00474 Sodium:solute symporter family PI861_12270 PF13411 MerR HTH family regulatory protein PI861_12280 PF13358 DDE superfamily endonuclease PI861_12280 PF13592 Winged helix-turn helix PI861_12335 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PI861_12345 PF12848 ABC transporter PI861_12345 PF00005 ABC transporter PI861_12350 PF00571 CBS domain PI861_12350 PF01380 SIS domain PI861_12355 PF01957 NfeD-like C-terminal, partner-binding PI861_12360 PF01145 SPFH domain / Band 7 family PI861_12360 PF16200 C-terminal region of band_7 PI861_12365 PF10414 Sirohaem synthase dimerisation region PI861_12365 PF14824 Sirohaem biosynthesis protein central PI861_12365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PI861_12370 PF01507 Phosphoadenosine phosphosulfate reductase family PI861_12375 PF00009 Elongation factor Tu GTP binding domain PI861_12380 PF03600 Citrate transporter PI861_12380 PF02080 TrkA-C domain PI861_12395 PF13358 DDE superfamily endonuclease PI861_12395 PF13592 Winged helix-turn helix PI861_12400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_12400 PF08447 PAS fold PI861_12420 PF00005 ABC transporter PI861_12435 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) PI861_12450 PF00480 ROK family PI861_12455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PI861_12455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PI861_12460 PF00162 Phosphoglycerate kinase PI861_12465 PF01116 Fructose-bisphosphate aldolase class-II PI861_12470 PF01266 FAD dependent oxidoreductase PI861_12480 PF11412 Disulphide bond corrector protein DsbC PI861_12480 PF02683 Cytochrome C biogenesis protein transmembrane region PI861_12485 PF03091 CutA1 divalent ion tolerance protein PI861_12505 PF01571 Aminomethyltransferase folate-binding domain PI861_12510 PF03937 Flavinator of succinate dehydrogenase PI861_12520 PF00890 FAD binding domain PI861_12520 PF02910 Fumarate reductase flavoprotein C-term PI861_12525 PF04542 Sigma-70 region 2 PI861_12525 PF08281 Sigma-70, region 4 PI861_12530 PF03873 Anti sigma-E protein RseA, C-terminal domain PI861_12530 PF03872 Anti sigma-E protein RseA, N-terminal domain PI861_12535 PF03888 MucB/RseB N-terminal domain PI861_12535 PF17188 MucB/RseB C-terminal domain PI861_12545 PF00679 Elongation factor G C-terminus PI861_12545 PF00009 Elongation factor Tu GTP binding domain PI861_12545 PF03144 Elongation factor Tu domain 2 PI861_12545 PF06421 GTP-binding protein LepA C-terminus PI861_12550 PF10502 Signal peptidase, peptidase S26 PI861_12555 PF00035 Double-stranded RNA binding motif PI861_12555 PF14622 Ribonuclease-III-like PI861_12560 PF01926 50S ribosome-binding GTPase PI861_12560 PF07650 KH domain PI861_12565 PF02565 Recombination protein O C terminal PI861_12565 PF11967 Recombination protein O N terminal PI861_12570 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PI861_12575 PF01510 N-acetylmuramoyl-L-alanine amidase PI861_12580 PF07308 Protein of unknown function (DUF1456) PI861_12585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI861_12585 PF01627 Hpt domain PI861_12585 PF00072 Response regulator receiver domain PI861_12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_12585 PF00672 HAMP domain PI861_12585 PF00512 His Kinase A (phospho-acceptor) domain PI861_12590 PF05958 tRNA (Uracil-5-)-methyltransferase PI861_12590 PF01938 TRAM domain PI861_12595 PF02824 TGS domain PI861_12595 PF04607 Region found in RelA / SpoT proteins PI861_12595 PF13291 ACT domain PI861_12600 PF03819 MazG nucleotide pyrophosphohydrolase domain PI861_12605 PF06418 CTP synthase N-terminus PI861_12605 PF00117 Glutamine amidotransferase class-I PI861_12610 PF00113 Enolase, C-terminal TIM barrel domain PI861_12610 PF03952 Enolase, N-terminal domain PI861_12615 PF04977 Septum formation initiator PI861_12620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PI861_12625 PF02542 YgbB family PI861_12630 PF01142 tRNA pseudouridine synthase D (TruD) PI861_12635 PF01975 Survival protein SurE PI861_12645 PF09335 SNARE associated Golgi protein PI861_12650 PF01551 Peptidase family M23 PI861_12650 PF01476 LysM domain PI861_12655 PF00140 Sigma-70 factor, region 1.2 PI861_12655 PF04542 Sigma-70 region 2 PI861_12655 PF04545 Sigma-70, region 4 PI861_12655 PF04539 Sigma-70 region 3 PI861_12660 PF00814 Glycoprotease family PI861_12665 PF01165 Ribosomal protein S21 PI861_12670 PF09424 Yqey-like protein PI861_12680 PF04545 Sigma-70, region 4 PI861_12680 PF04539 Sigma-70 region 3 PI861_12680 PF04542 Sigma-70 region 2 PI861_12680 PF00140 Sigma-70 factor, region 1.2 PI861_12680 PF04546 Sigma-70, non-essential region PI861_12680 PF03979 Sigma-70 factor, region 1.1 PI861_12690 PF13358 DDE superfamily endonuclease PI861_12690 PF13592 Winged helix-turn helix PI861_12705 PF00128 Alpha amylase, catalytic domain PI861_12720 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PI861_12720 PF02844 Phosphoribosylglycinamide synthetase, N domain PI861_12720 PF02843 Phosphoribosylglycinamide synthetase, C domain PI861_12725 PF02142 MGS-like domain PI861_12725 PF01808 AICARFT/IMPCHase bienzyme PI861_12730 PF13411 MerR HTH family regulatory protein PI861_12735 PF01872 RibD C-terminal domain PI861_12740 PF03889 Alternative ribosome-rescue factor A PI861_12745 PF04055 Radical SAM superfamily PI861_12745 PF06969 HemN C-terminal domain PI861_12750 PF01725 Ham1 family PI861_12755 PF07690 Major Facilitator Superfamily PI861_12775 PF13302 Acetyltransferase (GNAT) domain PI861_12780 PF13302 Acetyltransferase (GNAT) domain PI861_12790 PF03466 LysR substrate binding domain PI861_12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_12795 PF07690 Major Facilitator Superfamily PI861_12800 PF00267 Gram-negative porin PI861_12805 PF03605 Anaerobic c4-dicarboxylate membrane transporter PI861_12810 PF00206 Lyase PI861_12810 PF10415 Fumarase C C-terminus PI861_12815 PF04186 FxsA cytoplasmic membrane protein PI861_12820 PF01554 MatE PI861_12825 PF00166 Chaperonin 10 Kd subunit PI861_12830 PF00118 TCP-1/cpn60 chaperonin family PI861_12840 PF03707 Bacterial signalling protein N terminal repeat PI861_12840 PF00990 Diguanylate cyclase, GGDEF domain PI861_12840 PF00563 EAL domain PI861_12840 PF13188 PAS domain PI861_12850 PF00849 RNA pseudouridylate synthase PI861_12855 PF00176 SNF2 family N-terminal domain PI861_12855 PF12137 RNA polymerase recycling family C-terminal PI861_12855 PF18339 RapA N-terminal Tudor like domain 1 PI861_12855 PF00271 Helicase conserved C-terminal domain PI861_12855 PF18337 RapA N-terminal Tudor like domain PI861_12885 PF08343 Ribonucleotide reductase N-terminal PI861_12885 PF00317 Ribonucleotide reductase, all-alpha domain PI861_12885 PF02867 Ribonucleotide reductase, barrel domain PI861_12895 PF13638 PIN domain PI861_12895 PF02562 PhoH-like protein PI861_12900 PF00005 ABC transporter PI861_12905 PF00528 Binding-protein-dependent transport system inner membrane component PI861_12925 PF00694 Aconitase C-terminal domain PI861_12930 PF00330 Aconitase family (aconitate hydratase) PI861_12935 PF00180 Isocitrate/isopropylmalate dehydrogenase PI861_12940 PF00682 HMGL-like PI861_12940 PF08502 LeuA allosteric (dimerisation) domain PI861_12950 PF01569 PAP2 superfamily PI861_12965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PI861_12965 PF00205 Thiamine pyrophosphate enzyme, central domain PI861_12965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PI861_12970 PF10369 Small subunit of acetolactate synthase PI861_12975 PF07085 DRTGG domain PI861_12975 PF01515 Phosphate acetyl/butaryl transferase PI861_12980 PF00871 Acetokinase family PI861_12985 PF04217 Protein of unknown function, DUF412 PI861_12990 PF03887 YfbU domain PI861_12995 PF00578 AhpC/TSA family PI861_13000 PF01842 ACT domain PI861_13005 PF00701 Dihydrodipicolinate synthetase family PI861_13010 PF06804 NlpB/DapX lipoprotein PI861_13015 PF01259 SAICAR synthetase PI861_13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_13025 PF03466 LysR substrate binding domain PI861_13050 PF00072 Response regulator receiver domain PI861_13050 PF00989 PAS fold PI861_13050 PF18415 Histidine kinase receptor ArcB trans-membrane domain PI861_13050 PF01627 Hpt domain PI861_13050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_13050 PF00512 His Kinase A (phospho-acceptor) domain PI861_13055 PF01966 HD domain PI861_13065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI861_13065 PF00072 Response regulator receiver domain PI861_13065 PF01627 Hpt domain PI861_13065 PF00672 HAMP domain PI861_13065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_13065 PF00512 His Kinase A (phospho-acceptor) domain PI861_13080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_13080 PF00672 HAMP domain PI861_13080 PF12729 Four helix bundle sensory module for signal transduction PI861_13085 PF02357 Transcription termination factor nusG PI861_13090 PF03180 NLPA lipoprotein PI861_13095 PF00528 Binding-protein-dependent transport system inner membrane component PI861_13100 PF00005 ABC transporter PI861_13100 PF09383 NIL domain PI861_13110 PF00480 ROK family PI861_13115 PF08331 Domain of unknown function (DUF1730) PI861_13120 PF03853 YjeF-related protein N-terminus PI861_13120 PF01256 Carbohydrate kinase PI861_13125 PF01256 Carbohydrate kinase PI861_13125 PF03853 YjeF-related protein N-terminus PI861_13130 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PI861_13135 PF01520 N-acetylmuramoyl-L-alanine amidase PI861_13145 PF08676 MutL C terminal dimerisation domain PI861_13145 PF01119 DNA mismatch repair protein, C-terminal domain PI861_13155 PF17209 Hfq protein PI861_13160 PF16360 GTP-binding GTPase Middle Region PI861_13160 PF13167 GTP-binding GTPase N-terminal PI861_13160 PF01926 50S ribosome-binding GTPase PI861_13165 PF01145 SPFH domain / Band 7 family PI861_13165 PF12221 Bacterial membrane protein N terminal PI861_13170 PF01145 SPFH domain / Band 7 family PI861_13175 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) PI861_13180 PF00348 Polyprenyl synthetase PI861_13185 PF00829 Ribosomal prokaryotic L21 protein PI861_13190 PF01016 Ribosomal L27 protein PI861_13195 PF01926 50S ribosome-binding GTPase PI861_13195 PF01018 GTP1/OBG PI861_13200 PF07670 Nucleoside recognition PI861_13205 PF00501 AMP-binding enzyme PI861_13205 PF13193 AMP-binding enzyme C-terminal domain PI861_13225 PF00296 Luciferase-like monooxygenase PI861_13240 PF00149 Calcineurin-like phosphoesterase PI861_13245 PF04379 ApaG domain PI861_13250 PF00398 Ribosomal RNA adenine dimethylase PI861_13255 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PI861_13260 PF00639 PPIC-type PPIASE domain PI861_13260 PF09312 SurA N-terminal domain PI861_13265 PF04453 LPS transport system D PI861_13265 PF03968 OstA-like protein PI861_13270 PF01636 Phosphotransferase enzyme family PI861_13275 PF00483 Nucleotidyl transferase PI861_13280 PF00226 DnaJ domain PI861_13280 PF05099 Tellurite resistance protein TerB PI861_13295 PF12848 ABC transporter PI861_13295 PF00005 ABC transporter PI861_13305 PF01370 NAD dependent epimerase/dehydratase family PI861_13315 PF00005 ABC transporter PI861_13320 PF01032 FecCD transport family PI861_13330 PF06228 Haem utilisation ChuX/HutX PI861_13335 PF01243 Pyridoxamine 5'-phosphate oxidase PI861_13355 PF07715 TonB-dependent Receptor Plug Domain PI861_13355 PF00593 TonB dependent receptor PI861_13360 PF12832 MFS_1 like family PI861_13370 PF13443 Cro/C1-type HTH DNA-binding domain PI861_13390 PF17945 Beta/Gamma crystallin PI861_13390 PF12561 ToxR activated gene A lipoprotein domain PI861_13395 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading PI861_13395 PF18416 N-acetylglucosamine binding protein domain 2 PI861_13400 PF08241 Methyltransferase domain PI861_13405 PF00027 Cyclic nucleotide-binding domain PI861_13405 PF13545 Crp-like helix-turn-helix domain PI861_13410 PF02566 OsmC-like protein PI861_13425 PF00485 Phosphoribulokinase / Uridine kinase family PI861_13435 PF00892 EamA-like transporter family PI861_13440 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PI861_13445 PF01522 Polysaccharide deacetylase PI861_13455 PF00535 Glycosyl transferase family 2 PI861_13460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PI861_13465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PI861_13465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PI861_13465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PI861_13470 PF06794 Uncharacterised protein family (UPF0270) PI861_13475 PF00563 EAL domain PI861_13475 PF00360 Phytochrome region PI861_13475 PF00990 Diguanylate cyclase, GGDEF domain PI861_13475 PF01590 GAF domain PI861_13480 PF00561 alpha/beta hydrolase fold PI861_13485 PF01584 CheW-like domain PI861_13485 PF00072 Response regulator receiver domain PI861_13495 PF09526 Probable metal-binding protein (DUF2387) PI861_13500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI861_13505 PF04102 SlyX PI861_13515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI861_13515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PI861_13520 PF02954 Bacterial regulatory protein, Fis family PI861_13520 PF00072 Response regulator receiver domain PI861_13520 PF00158 Sigma-54 interaction domain PI861_13540 PF02872 5'-nucleotidase, C-terminal domain PI861_13540 PF00149 Calcineurin-like phosphoesterase PI861_13545 PF12792 CSS motif domain associated with EAL PI861_13545 PF00563 EAL domain PI861_13560 PF00772 DnaB-like helicase N terminal domain PI861_13560 PF03796 DnaB-like helicase C terminal domain PI861_13565 PF00842 Alanine racemase, C-terminal domain PI861_13565 PF01168 Alanine racemase, N-terminal domain PI861_13570 PF12838 4Fe-4S dicluster domain PI861_13575 PF01136 Peptidase family U32 PI861_13575 PF16325 Peptidase family U32 C-terminal domain PI861_13580 PF00989 PAS fold PI861_13580 PF01590 GAF domain PI861_13580 PF00563 EAL domain PI861_13580 PF00990 Diguanylate cyclase, GGDEF domain PI861_13600 PF15976 CS1-pili formation C-terminal PI861_13600 PF16967 E-set like domain PI861_13610 PF00196 Bacterial regulatory proteins, luxR family PI861_13610 PF00072 Response regulator receiver domain PI861_13615 PF00196 Bacterial regulatory proteins, luxR family PI861_13615 PF00072 Response regulator receiver domain PI861_13620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI861_13620 PF00072 Response regulator receiver domain PI861_13620 PF01627 Hpt domain PI861_13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_13620 PF00672 HAMP domain PI861_13620 PF00512 His Kinase A (phospho-acceptor) domain PI861_13645 PF00266 Aminotransferase class-V PI861_13650 PF01339 CheB methylesterase PI861_13650 PF00072 Response regulator receiver domain PI861_13655 PF03975 CheD chemotactic sensory transduction PI861_13660 PF01739 CheR methyltransferase, SAM binding domain PI861_13660 PF03705 CheR methyltransferase, all-alpha domain PI861_13665 PF02203 Tar ligand binding domain homologue PI861_13665 PF00672 HAMP domain PI861_13665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_13670 PF01584 CheW-like domain PI861_13675 PF12729 Four helix bundle sensory module for signal transduction PI861_13675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_13675 PF00672 HAMP domain PI861_13680 PF01584 CheW-like domain PI861_13680 PF01627 Hpt domain PI861_13680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_13680 PF02895 Signal transducing histidine kinase, homodimeric domain PI861_13690 PF00072 Response regulator receiver domain PI861_13700 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PI861_13700 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PI861_13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_13705 PF03466 LysR substrate binding domain PI861_13710 PF01810 LysE type translocator PI861_13725 PF06906 Protein of unknown function (DUF1272) PI861_13730 PF01209 ubiE/COQ5 methyltransferase family PI861_13740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PI861_13740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PI861_13745 PF06029 AlkA N-terminal domain PI861_13745 PF12833 Helix-turn-helix domain PI861_13745 PF00730 HhH-GPD superfamily base excision DNA repair protein PI861_13745 PF02805 Metal binding domain of Ada PI861_13755 PF02074 Carboxypeptidase Taq (M32) metallopeptidase PI861_13780 PF00106 short chain dehydrogenase PI861_13790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_13800 PF07995 Glucose / Sorbosone dehydrogenase PI861_13825 PF01817 Chorismate mutase type II PI861_13825 PF00800 Prephenate dehydratase PI861_13855 PF08349 Protein of unknown function (DUF1722) PI861_13860 PF13411 MerR HTH family regulatory protein PI861_13865 PF03441 FAD binding domain of DNA photolyase PI861_13865 PF00875 DNA photolyase PI861_13875 PF00106 short chain dehydrogenase PI861_13915 PF00210 Ferritin-like domain PI861_13920 PF03063 Prismane/CO dehydrogenase family PI861_13925 PF00970 Oxidoreductase FAD-binding domain PI861_13925 PF00111 2Fe-2S iron-sulfur cluster binding domain PI861_13925 PF00175 Oxidoreductase NAD-binding domain PI861_13930 PF16363 GDP-mannose 4,6 dehydratase PI861_13935 PF06965 Na+/H+ antiporter 1 PI861_13935 PF13462 Thioredoxin PI861_13945 PF06165 Glycosyltransferase family 36 PI861_13945 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain PI861_13945 PF10091 Putative glucoamylase PI861_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_13950 PF03466 LysR substrate binding domain PI861_13955 PF03306 Alpha-acetolactate decarboxylase PI861_13965 PF01965 DJ-1/PfpI family PI861_13970 PF02558 Ketopantoate reductase PanE/ApbA PI861_13970 PF08546 Ketopantoate reductase PanE/ApbA C terminal PI861_13975 PF04461 Protein of unknown function (DUF520) PI861_13980 PF03502 Nucleoside-specific channel-forming protein, Tsx PI861_13985 PF07690 Major Facilitator Superfamily PI861_13995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PI861_14005 PF05175 Methyltransferase small domain PI861_14010 PF01722 BolA-like protein PI861_14020 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PI861_14020 PF11973 NQRA C-terminal domain PI861_14025 PF03116 NQR2, RnfD, RnfE family PI861_14030 PF04205 FMN-binding domain PI861_14035 PF02508 Rnf-Nqr subunit, membrane protein PI861_14040 PF02508 Rnf-Nqr subunit, membrane protein PI861_14045 PF00970 Oxidoreductase FAD-binding domain PI861_14045 PF00111 2Fe-2S iron-sulfur cluster binding domain PI861_14045 PF00175 Oxidoreductase NAD-binding domain PI861_14050 PF02424 ApbE family PI861_14065 PF11798 IMS family HHH motif PI861_14065 PF00817 impB/mucB/samB family PI861_14065 PF11799 impB/mucB/samB family C-terminal domain PI861_14070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_14070 PF00672 HAMP domain PI861_14075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_14075 PF03466 LysR substrate binding domain PI861_14085 PF04241 Protein of unknown function (DUF423) PI861_14090 PF01728 FtsJ-like methyltransferase PI861_14090 PF18125 RlmM ferredoxin-like domain PI861_14100 PF00180 Isocitrate/isopropylmalate dehydrogenase PI861_14100 PF18324 Hypothetical protein TT1725 PI861_14105 PF01367 5'-3' exonuclease, C-terminal SAM fold PI861_14105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PI861_14110 PF11892 Domain of unknown function (DUF3412) PI861_14110 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PI861_14110 PF03641 Possible lysine decarboxylase PI861_14115 PF00990 Diguanylate cyclase, GGDEF domain PI861_14125 PF14489 QueF-like protein PI861_14125 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PI861_14130 PF07348 Syd protein (SUKH-2) PI861_14135 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) PI861_14160 PF04287 tRNA pseudouridine synthase C PI861_14165 PF00849 RNA pseudouridylate synthase PI861_14170 PF00258 Flavodoxin PI861_14175 PF02264 LamB porin PI861_14190 PF07148 Maltose operon periplasmic protein precursor (MalM) PI861_14195 PF00367 phosphotransferase system, EIIB PI861_14195 PF02378 Phosphotransferase system, EIIC PI861_14200 PF11944 Protein of unknown function (DUF3461) PI861_14205 PF14602 Hexapeptide repeat of succinyl-transferase PI861_14205 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PI861_14205 PF00132 Bacterial transferase hexapeptide (six repeats) PI861_14215 PF00557 Metallopeptidase family M24 PI861_14220 PF00318 Ribosomal protein S2 PI861_14225 PF00889 Elongation factor TS PI861_14230 PF00696 Amino acid kinase family PI861_14235 PF01765 Ribosome recycling factor PI861_14240 PF01255 Putative undecaprenyl diphosphate synthase PI861_14250 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PI861_14250 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PI861_14250 PF13288 DXP reductoisomerase C-terminal domain PI861_14255 PF17820 PDZ domain PI861_14255 PF02163 Peptidase family M50 PI861_14260 PF07244 Surface antigen variable number repeat PI861_14260 PF01103 Surface antigen PI861_14265 PF03938 Outer membrane protein (OmpH-like) PI861_14270 PF00132 Bacterial transferase hexapeptide (six repeats) PI861_14270 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PI861_14275 PF07977 FabA-like domain PI861_14280 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PI861_14280 PF00132 Bacterial transferase hexapeptide (six repeats) PI861_14285 PF02684 Lipid-A-disaccharide synthetase PI861_14290 PF01351 Ribonuclease HII PI861_14295 PF01336 OB-fold nucleic acid binding domain PI861_14295 PF07733 Bacterial DNA polymerase III alpha NTPase domain PI861_14295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PI861_14295 PF14579 Helix-hairpin-helix motif PI861_14295 PF02811 PHP domain PI861_14300 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PI861_14305 PF18500 CadC C-terminal domain 1 PI861_14305 PF00486 Transcriptional regulatory protein, C terminal PI861_14310 PF13520 Amino acid permease PI861_14315 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain PI861_14315 PF01276 Orn/Lys/Arg decarboxylase, major domain PI861_14315 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PI861_14320 PF08543 Phosphomethylpyrimidine kinase PI861_14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_14330 PF03466 LysR substrate binding domain PI861_14340 PF13520 Amino acid permease PI861_14345 PF13302 Acetyltransferase (GNAT) domain PI861_14350 PF12848 ABC transporter PI861_14350 PF00005 ABC transporter PI861_14350 PF16326 ABC transporter C-terminal domain PI861_14360 PF05649 Peptidase family M13 PI861_14360 PF01431 Peptidase family M13 PI861_14365 PF11734 TilS substrate C-terminal domain PI861_14365 PF09179 TilS substrate binding domain PI861_14365 PF01171 PP-loop family PI861_14370 PF00990 Diguanylate cyclase, GGDEF domain PI861_14405 PF00072 Response regulator receiver domain PI861_14405 PF00196 Bacterial regulatory proteins, luxR family PI861_14415 PF00128 Alpha amylase, catalytic domain PI861_14425 PF01161 Phosphatidylethanolamine-binding protein PI861_14430 PF00709 Adenylosuccinate synthetase PI861_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_14435 PF03466 LysR substrate binding domain PI861_14445 PF00155 Aminotransferase class I and II PI861_14450 PF07690 Major Facilitator Superfamily PI861_14455 PF03466 LysR substrate binding domain PI861_14455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_14460 PF00106 short chain dehydrogenase PI861_14465 PF08496 Peptidase family S49 N-terminal PI861_14465 PF01343 Peptidase family S49 PI861_14470 PF04996 Succinylarginine dihydrolase PI861_14475 PF08272 Topoisomerase I zinc-ribbon-like PI861_14475 PF01131 DNA topoisomerase PI861_14475 PF01751 Toprim domain PI861_14475 PF01396 Topoisomerase DNA binding C4 zinc finger PI861_14490 PF08447 PAS fold PI861_14490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_14495 PF02838 Glycosyl hydrolase family 20, domain 2 PI861_14495 PF00728 Glycosyl hydrolase family 20, catalytic domain PI861_14500 PF01869 BadF/BadG/BcrA/BcrD ATPase family PI861_14510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI861_14510 PF00005 ABC transporter PI861_14515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI861_14515 PF00005 ABC transporter PI861_14520 PF12911 N-terminal TM domain of oligopeptide transport permease C PI861_14520 PF00528 Binding-protein-dependent transport system inner membrane component PI861_14525 PF00528 Binding-protein-dependent transport system inner membrane component PI861_14530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_14535 PF00072 Response regulator receiver domain PI861_14535 PF09308 LuxQ, periplasmic PI861_14535 PF00512 His Kinase A (phospho-acceptor) domain PI861_14555 PF10725 Protein of unknown function (DUF2517) PI861_14565 PF13426 PAS domain PI861_14565 PF08447 PAS fold PI861_14565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_14575 PF04632 Fusaric acid resistance protein family PI861_14580 PF03454 MoeA C-terminal region (domain IV) PI861_14580 PF00994 Probable molybdopterin binding domain PI861_14580 PF03453 MoeA N-terminal region (domain I and II) PI861_14585 PF12804 MobA-like NTP transferase domain PI861_14590 PF00005 ABC transporter PI861_14595 PF00528 Binding-protein-dependent transport system inner membrane component PI861_14600 PF12849 PBP superfamily domain PI861_14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_14610 PF00512 His Kinase A (phospho-acceptor) domain PI861_14610 PF00989 PAS fold PI861_14620 PF02634 FdhD/NarQ family PI861_14630 PF13358 DDE superfamily endonuclease PI861_14630 PF13592 Winged helix-turn helix PI861_14655 PF12794 Mechanosensitive ion channel inner membrane domain 1 PI861_14655 PF12795 Mechanosensitive ion channel porin domain PI861_14655 PF00924 Mechanosensitive ion channel PI861_14660 PF00224 Pyruvate kinase, barrel domain PI861_14660 PF02887 Pyruvate kinase, alpha/beta domain PI861_14670 PF04389 Peptidase family M28 PI861_14670 PF04151 Bacterial pre-peptidase C-terminal domain PI861_14685 PF04381 Putative exonuclease, RdgC PI861_14695 PF00149 Calcineurin-like phosphoesterase PI861_14695 PF12320 Type 5 capsule protein repressor C-terminal domain PI861_14700 PF13476 AAA domain PI861_14710 PF01292 Prokaryotic cytochrome b561 PI861_14720 PF00990 Diguanylate cyclase, GGDEF domain PI861_14725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PI861_14730 PF05524 PEP-utilising enzyme, N-terminal PI861_14730 PF00391 PEP-utilising enzyme, mobile domain PI861_14730 PF02896 PEP-utilising enzyme, TIM barrel domain PI861_14735 PF00381 PTS HPr component phosphorylation site PI861_14740 PF00291 Pyridoxal-phosphate dependent enzyme PI861_14755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PI861_14755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PI861_14760 PF18389 TrmO C-terminal domain PI861_14760 PF01980 tRNA-methyltransferase O PI861_14780 PF00664 ABC transporter transmembrane region PI861_14780 PF00005 ABC transporter PI861_14785 PF00664 ABC transporter transmembrane region PI861_14785 PF00005 ABC transporter PI861_14800 PF00486 Transcriptional regulatory protein, C terminal PI861_14800 PF00072 Response regulator receiver domain PI861_14810 PF03737 Aldolase/RraA PI861_14825 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) PI861_14830 PF00588 SpoU rRNA Methylase family PI861_14835 PF00696 Amino acid kinase family PI861_14835 PF13840 ACT domain PI861_14835 PF00742 Homoserine dehydrogenase PI861_14835 PF03447 Homoserine dehydrogenase, NAD binding domain PI861_14835 PF01842 ACT domain PI861_14840 PF08544 GHMP kinases C terminal PI861_14840 PF00288 GHMP kinases N terminal domain PI861_14845 PF14821 Threonine synthase N terminus PI861_14845 PF00291 Pyridoxal-phosphate dependent enzyme PI861_14850 PF13592 Winged helix-turn helix PI861_14850 PF13358 DDE superfamily endonuclease PI861_14865 PF13592 Winged helix-turn helix PI861_14865 PF13358 DDE superfamily endonuclease PI861_14875 PF01797 Transposase IS200 like PI861_14895 PF01048 Phosphorylase superfamily PI861_14910 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PI861_14915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PI861_14915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI861_14920 PF02690 Na+/Pi-cotransporter PI861_14925 PF00324 Amino acid permease PI861_14930 PF00324 Amino acid permease PI861_14935 PF00202 Aminotransferase class-III PI861_14940 PF00171 Aldehyde dehydrogenase family PI861_14945 PF07883 Cupin domain PI861_14945 PF01381 Helix-turn-helix PI861_14950 PF01266 FAD dependent oxidoreductase PI861_14960 PF07883 Cupin domain PI861_14960 PF12833 Helix-turn-helix domain PI861_14985 PF00816 H-NS histone family PI861_14990 PF00872 Transposase, Mutator family PI861_14995 PF00793 DAHP synthetase I family PI861_15000 PF08021 Siderophore-interacting FAD-binding domain PI861_15000 PF04954 Siderophore-interacting protein PI861_15005 PF02321 Outer membrane efflux protein PI861_15010 PF12704 MacB-like periplasmic core domain PI861_15010 PF00005 ABC transporter PI861_15010 PF02687 FtsX-like permease family PI861_15015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_15025 PF01368 DHH family PI861_15025 PF02833 DHHA2 domain PI861_15030 PF02463 RecF/RecN/SMC N terminal domain PI861_15035 PF01513 ATP-NAD kinase PI861_15040 PF01025 GrpE PI861_15045 PF00012 Hsp70 protein PI861_15050 PF00684 DnaJ central domain PI861_15050 PF00226 DnaJ domain PI861_15050 PF01556 DnaJ C terminal domain PI861_15055 PF02264 LamB porin PI861_15055 PF11471 Maltoporin periplasmic N-terminal extension PI861_15060 PF00294 pfkB family carbohydrate kinase PI861_15065 PF00367 phosphotransferase system, EIIB PI861_15065 PF02378 Phosphotransferase system, EIIC PI861_15075 PF13407 Periplasmic binding protein domain PI861_15075 PF00356 Bacterial regulatory proteins, lacI family PI861_15080 PF02308 MgtC family PI861_15100 PF04143 Sulphur transport PI861_15115 PF00873 AcrB/AcrD/AcrF family PI861_15120 PF00990 Diguanylate cyclase, GGDEF domain PI861_15120 PF00563 EAL domain PI861_15120 PF03707 Bacterial signalling protein N terminal repeat PI861_15125 PF03099 Biotin/lipoate A/B protein ligase family PI861_15125 PF10437 Bacterial lipoate protein ligase C-terminus PI861_15135 PF00873 AcrB/AcrD/AcrF family PI861_15140 PF00529 HlyD membrane-fusion protein of T1SS PI861_15140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_15155 PF00873 AcrB/AcrD/AcrF family PI861_15160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_15165 PF03372 Endonuclease/Exonuclease/phosphatase family PI861_15180 PF02424 ApbE family PI861_15185 PF00127 Copper binding proteins, plastocyanin/azurin family PI861_15200 PF01156 Inosine-uridine preferring nucleoside hydrolase PI861_15210 PF00034 Cytochrome c PI861_15210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PI861_15220 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PI861_15220 PF06481 COX Aromatic Rich Motif PI861_15225 PF00115 Cytochrome C and Quinol oxidase polypeptide I PI861_15230 PF00510 Cytochrome c oxidase subunit III PI861_15235 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PI861_15240 PF01040 UbiA prenyltransferase family PI861_15245 PF07690 Major Facilitator Superfamily PI861_15250 PF00561 alpha/beta hydrolase fold PI861_15265 PF00356 Bacterial regulatory proteins, lacI family PI861_15265 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI861_15270 PF00367 phosphotransferase system, EIIB PI861_15270 PF02378 Phosphotransferase system, EIIC PI861_15275 PF00155 Aminotransferase class I and II PI861_15300 PF01238 Phosphomannose isomerase type I PI861_15305 PF12833 Helix-turn-helix domain PI861_15310 PF00180 Isocitrate/isopropylmalate dehydrogenase PI861_15320 PF00291 Pyridoxal-phosphate dependent enzyme PI861_15325 PF02447 GntP family permease PI861_15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_15330 PF03466 LysR substrate binding domain PI861_15405 PF01668 SmpB protein PI861_15410 PF03364 Polyketide cyclase / dehydrase and lipid transport PI861_15415 PF03658 RnfH family Ubiquitin PI861_15420 PF13460 NAD(P)H-binding PI861_15425 PF04355 SmpA / OmlA family PI861_15460 PF04972 BON domain PI861_15460 PF00263 Bacterial type II and III secretion system protein PI861_15460 PF13629 Pilus formation protein N terminal region PI861_15470 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PI861_15475 PF00437 Type II/IV secretion system protein PI861_15510 PF00465 Iron-containing alcohol dehydrogenase PI861_15515 PF01048 Phosphorylase superfamily PI861_15520 PF00849 RNA pseudouridylate synthase PI861_15525 PF01156 Inosine-uridine preferring nucleoside hydrolase PI861_15540 PF07509 Protein of unknown function (DUF1523) PI861_15545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_15545 PF00672 HAMP domain PI861_15545 PF12729 Four helix bundle sensory module for signal transduction PI861_15550 PF01810 LysE type translocator PI861_15560 PF03471 Transporter associated domain PI861_15560 PF00999 Sodium/hydrogen exchanger family PI861_15560 PF02080 TrkA-C domain PI861_15570 PF03471 Transporter associated domain PI861_15570 PF00999 Sodium/hydrogen exchanger family PI861_15570 PF02080 TrkA-C domain PI861_15580 PF02557 D-alanyl-D-alanine carboxypeptidase PI861_15585 PF07687 Peptidase dimerisation domain PI861_15585 PF01546 Peptidase family M20/M25/M40 PI861_15590 PF03960 ArsC family PI861_15595 PF03466 LysR substrate binding domain PI861_15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_15610 PF03605 Anaerobic c4-dicarboxylate membrane transporter PI861_15615 PF00152 tRNA synthetases class II (D, K and N) PI861_15615 PF01336 OB-fold nucleic acid binding domain PI861_15630 PF00202 Aminotransferase class-III PI861_15635 PF06968 Biotin and Thiamin Synthesis associated domain PI861_15635 PF04055 Radical SAM superfamily PI861_15640 PF00155 Aminotransferase class I and II PI861_15645 PF12697 Alpha/beta hydrolase family PI861_15645 PF08241 Methyltransferase domain PI861_15655 PF01435 Peptidase family M48 PI861_15660 PF08447 PAS fold PI861_15660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_15660 PF13426 PAS domain PI861_15665 PF03476 MOSC N-terminal beta barrel domain PI861_15665 PF03473 MOSC domain PI861_15665 PF00111 2Fe-2S iron-sulfur cluster binding domain PI861_15665 PF03476 MOSC N-terminal beta barrel domain PI861_15665 PF03473 MOSC domain PI861_15665 PF00111 2Fe-2S iron-sulfur cluster binding domain PI861_15680 PF04325 Protein of unknown function (DUF465) PI861_15690 PF01554 MatE PI861_15695 PF01740 STAS domain PI861_15695 PF00916 Sulfate permease family PI861_15710 PF00291 Pyridoxal-phosphate dependent enzyme PI861_15720 PF00465 Iron-containing alcohol dehydrogenase PI861_15730 PF17932 Tetracyclin repressor-like, C-terminal domain PI861_15730 PF00440 Bacterial regulatory proteins, tetR family PI861_15735 PF00171 Aldehyde dehydrogenase family PI861_15745 PF00877 NlpC/P60 family PI861_15750 PF12563 Hemolytic toxin N terminal PI861_15750 PF07968 Leukocidin/Hemolysin toxin family PI861_15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_15755 PF03466 LysR substrate binding domain PI861_15760 PF13358 DDE superfamily endonuclease PI861_15760 PF13592 Winged helix-turn helix PI861_15765 PF10417 C-terminal domain of 1-Cys peroxiredoxin PI861_15765 PF00578 AhpC/TSA family PI861_15785 PF08003 Protein of unknown function (DUF1698) PI861_15790 PF13649 Methyltransferase domain PI861_15800 PF02938 GAD domain PI861_15800 PF01336 OB-fold nucleic acid binding domain PI861_15800 PF00152 tRNA synthetases class II (D, K and N) PI861_15805 PF01709 Transcriptional regulator PI861_15810 PF08019 Phosphoethanolamine transferase EptA/EptB PI861_15810 PF00884 Sulfatase PI861_15815 PF00728 Glycosyl hydrolase family 20, catalytic domain PI861_15815 PF03173 Putative carbohydrate binding domain PI861_15815 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain PI861_15815 PF02838 Glycosyl hydrolase family 20, domain 2 PI861_15825 PF00550 Phosphopantetheine attachment site PI861_15825 PF00668 Condensation domain PI861_15825 PF13193 AMP-binding enzyme C-terminal domain PI861_15825 PF00501 AMP-binding enzyme PI861_15825 PF00975 Thioesterase domain PI861_15835 PF00665 Integrase core domain PI861_15840 PF01695 IstB-like ATP binding protein PI861_15850 PF00668 Condensation domain PI861_15850 PF16197 Ketoacyl-synthetase C-terminal extension PI861_15850 PF00109 Beta-ketoacyl synthase, N-terminal domain PI861_15850 PF02801 Beta-ketoacyl synthase, C-terminal domain PI861_15850 PF00698 Acyl transferase domain PI861_15850 PF00550 Phosphopantetheine attachment site PI861_15855 PF00698 Acyl transferase domain PI861_15855 PF08240 Alcohol dehydrogenase GroES-like domain PI861_15855 PF16197 Ketoacyl-synthetase C-terminal extension PI861_15855 PF00109 Beta-ketoacyl synthase, N-terminal domain PI861_15855 PF02801 Beta-ketoacyl synthase, C-terminal domain PI861_15855 PF08659 KR domain PI861_15855 PF00550 Phosphopantetheine attachment site PI861_15855 PF14765 Polyketide synthase dehydratase PI861_15860 PF00550 Phosphopantetheine attachment site PI861_15860 PF00501 AMP-binding enzyme PI861_15860 PF13193 AMP-binding enzyme C-terminal domain PI861_15860 PF00668 Condensation domain PI861_15870 PF13439 Glycosyltransferase Family 4 PI861_15870 PF00534 Glycosyl transferases group 1 PI861_15880 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PI861_15880 PF01648 4'-phosphopantetheinyl transferase superfamily PI861_15900 PF00480 ROK family PI861_15900 PF01047 MarR family PI861_15905 PF01979 Amidohydrolase family PI861_15910 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PI861_15915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PI861_15915 PF00367 phosphotransferase system, EIIB PI861_15915 PF02378 Phosphotransferase system, EIIC PI861_15920 PF02838 Glycosyl hydrolase family 20, domain 2 PI861_15920 PF00728 Glycosyl hydrolase family 20, catalytic domain PI861_15920 PF03173 Putative carbohydrate binding domain PI861_15920 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain PI861_15925 PF00749 tRNA synthetases class I (E and Q), catalytic domain PI861_15925 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PI861_15930 PF01475 Ferric uptake regulator family PI861_15940 PF00258 Flavodoxin PI861_15945 PF01402 Ribbon-helix-helix protein, copG family PI861_15955 PF12697 Alpha/beta hydrolase family PI861_15960 PF17206 SeqA protein N-terminal domain PI861_15960 PF03925 SeqA protein C-terminal domain PI861_15965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PI861_15965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PI861_15965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PI861_15965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PI861_15975 PF01047 MarR family PI861_15980 PF13406 Transglycosylase SLT domain PI861_15985 PF01066 CDP-alcohol phosphatidyltransferase PI861_15990 PF00005 ABC transporter PI861_15995 PF00528 Binding-protein-dependent transport system inner membrane component PI861_16000 PF13416 Bacterial extracellular solute-binding protein PI861_16005 PF00403 Heavy-metal-associated domain PI861_16005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PI861_16005 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_16010 PF02627 Carboxymuconolactone decarboxylase family PI861_16020 PF01625 Peptide methionine sulfoxide reductase PI861_16040 PF01103 Surface antigen PI861_16040 PF07244 Surface antigen variable number repeat PI861_16040 PF17243 POTRA domain TamA domain 1 PI861_16045 PF04357 TamB, inner membrane protein subunit of TAM complex PI861_16060 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PI861_16065 PF00563 EAL domain PI861_16065 PF03707 Bacterial signalling protein N terminal repeat PI861_16065 PF00990 Diguanylate cyclase, GGDEF domain PI861_16070 PF14718 Soluble lytic murein transglycosylase L domain PI861_16070 PF01464 Transglycosylase SLT domain PI861_16075 PF00356 Bacterial regulatory proteins, lacI family PI861_16085 PF03061 Thioesterase superfamily PI861_16090 PF03372 Endonuclease/Exonuclease/phosphatase family PI861_16095 PF01464 Transglycosylase SLT domain PI861_16095 PF01476 LysM domain PI861_16100 PF00753 Metallo-beta-lactamase superfamily PI861_16100 PF16123 Hydroxyacylglutathione hydrolase C-terminus PI861_16105 PF08241 Methyltransferase domain PI861_16110 PF00075 RNase H PI861_16115 PF00929 Exonuclease PI861_16125 PF11849 Domain of unknown function (DUF3369) PI861_16130 PF09317 Domain of unknown function (DUF1974) PI861_16130 PF02770 Acyl-CoA dehydrogenase, middle domain PI861_16130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PI861_16130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PI861_16135 PF13580 SIS domain PI861_16140 PF13230 Glutamine amidotransferases class-II PI861_16150 PF01933 Uncharacterised protein family UPF0052 PI861_16160 PF00072 Response regulator receiver domain PI861_16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_16160 PF00512 His Kinase A (phospho-acceptor) domain PI861_16160 PF09456 RcsC Alpha-Beta-Loop (ABL) PI861_16170 PF00072 Response regulator receiver domain PI861_16170 PF00196 Bacterial regulatory proteins, luxR family PI861_16175 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PI861_16175 PF07730 Histidine kinase PI861_16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_16175 PF00672 HAMP domain PI861_16180 PF04055 Radical SAM superfamily PI861_16180 PF06463 Molybdenum Cofactor Synthesis C PI861_16185 PF12838 4Fe-4S dicluster domain PI861_16185 PF13187 4Fe-4S dicluster domain PI861_16195 PF10518 TAT (twin-arginine translocation) pathway signal sequence PI861_16195 PF01568 Molydopterin dinucleotide binding domain PI861_16195 PF00384 Molybdopterin oxidoreductase PI861_16195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PI861_16200 PF12800 4Fe-4S binding domain PI861_16200 PF12838 4Fe-4S dicluster domain PI861_16205 PF13237 4Fe-4S dicluster domain PI861_16205 PF12801 4Fe-4S binding domain PI861_16210 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) PI861_16215 PF03264 NapC/NirT cytochrome c family, N-terminal region PI861_16220 PF00994 Probable molybdopterin binding domain PI861_16225 PF01967 MoaC family PI861_16230 PF02597 ThiS family PI861_16235 PF02391 MoaE protein PI861_16245 PF00528 Binding-protein-dependent transport system inner membrane component PI861_16250 PF00005 ABC transporter PI861_16250 PF03459 TOBE domain PI861_16255 PF00561 alpha/beta hydrolase fold PI861_16260 PF06406 StbA protein PI861_16270 PF06291 Bor protein PI861_16275 PF06291 Bor protein PI861_16280 PF00899 ThiF family PI861_16285 PF03453 MoeA N-terminal region (domain I and II) PI861_16285 PF03454 MoeA C-terminal region (domain IV) PI861_16285 PF00994 Probable molybdopterin binding domain PI861_16290 PF01227 GTP cyclohydrolase I PI861_16295 PF00672 HAMP domain PI861_16295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_16295 PF17200 Single Cache domain 2 PI861_16300 PF01268 Formate--tetrahydrofolate ligase PI861_16310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_16310 PF03466 LysR substrate binding domain PI861_16315 PF04264 YceI-like domain PI861_16340 PF01546 Peptidase family M20/M25/M40 PI861_16340 PF07687 Peptidase dimerisation domain PI861_16345 PF17944 Arginine decarboxylase C-terminal helical extension PI861_16345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PI861_16345 PF17810 Arginine decarboxylase helical bundle domain PI861_16360 PF00300 Histidine phosphatase superfamily (branch 1) PI861_16375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI861_16385 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PI861_16385 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PI861_16395 PF00849 RNA pseudouridylate synthase PI861_16395 PF01479 S4 domain PI861_16400 PF07690 Major Facilitator Superfamily PI861_16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_16410 PF03466 LysR substrate binding domain PI861_16420 PF10689 Protein of unknown function (DUF2496) PI861_16430 PF04391 Protein of unknown function (DUF533) PI861_16435 PF00155 Aminotransferase class I and II PI861_16435 PF00392 Bacterial regulatory proteins, gntR family PI861_16440 PF01654 Cytochrome bd terminal oxidase subunit I PI861_16445 PF02322 Cytochrome bd terminal oxidase subunit II PI861_16455 PF07690 Major Facilitator Superfamily PI861_16460 PF00248 Aldo/keto reductase family PI861_16465 PF03992 Antibiotic biosynthesis monooxygenase PI861_16495 PF03466 LysR substrate binding domain PI861_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_16500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PI861_16500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PI861_16505 PF00230 Major intrinsic protein PI861_16510 PF07690 Major Facilitator Superfamily PI861_16515 PF00455 DeoR C terminal sensor domain PI861_16515 PF08220 DeoR-like helix-turn-helix domain PI861_16525 PF01266 FAD dependent oxidoreductase PI861_16525 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PI861_16530 PF03009 Glycerophosphoryl diester phosphodiesterase family PI861_16535 PF00793 DAHP synthetase I family PI861_16540 PF01817 Chorismate mutase type II PI861_16540 PF02153 Prephenate dehydrogenase PI861_16545 PF03466 LysR substrate binding domain PI861_16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_16550 PF04219 Protein of unknown function, DUF PI861_16555 PF03974 Ecotin PI861_16575 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PI861_16575 PF00326 Prolyl oligopeptidase family PI861_16580 PF00593 TonB dependent receptor PI861_16580 PF07715 TonB-dependent Receptor Plug Domain PI861_16585 PF00884 Sulfatase PI861_16585 PF11893 Domain of unknown function (DUF3413) PI861_16590 PF07208 Protein of unknown function (DUF1414) PI861_16595 PF04245 37-kD nucleoid-associated bacterial protein PI861_16600 PF01547 Bacterial extracellular solute-binding protein PI861_16605 PF00528 Binding-protein-dependent transport system inner membrane component PI861_16605 PF14785 Maltose transport system permease protein MalF P2 domain PI861_16610 PF00528 Binding-protein-dependent transport system inner membrane component PI861_16615 PF00005 ABC transporter PI861_16615 PF08402 TOBE domain PI861_16620 PF03976 Polyphosphate kinase 2 (PPK2) PI861_16625 PF00561 alpha/beta hydrolase fold PI861_16630 PF01594 AI-2E family transporter PI861_16635 PF01206 Sulfurtransferase TusA PI861_16640 PF01435 Peptidase family M48 PI861_16640 PF07720 Tetratricopeptide repeat PI861_16650 PF03960 ArsC family PI861_16660 PF04336 Acyl carrier protein phosphodiesterase PI861_16665 PF03956 Lysine exporter LysO PI861_16670 PF00005 ABC transporter PI861_16675 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_16680 PF00528 Binding-protein-dependent transport system inner membrane component PI861_16685 PF00528 Binding-protein-dependent transport system inner membrane component PI861_16700 PF04055 Radical SAM superfamily PI861_16705 PF03707 Bacterial signalling protein N terminal repeat PI861_16705 PF00563 EAL domain PI861_16705 PF00990 Diguanylate cyclase, GGDEF domain PI861_16715 PF00207 Alpha-2-macroglobulin family PI861_16715 PF07703 Alpha-2-macroglobulin bait region domain PI861_16715 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain PI861_16715 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain PI861_16715 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain PI861_16715 PF17962 Bacterial macroglobulin domain 6 PI861_16715 PF01835 MG2 domain PI861_16715 PF07678 A-macroglobulin TED domain PI861_16715 PF11974 Bacterial alpha-2-macroglobulin MG3 domain PI861_16720 PF06832 Penicillin-Binding Protein C-terminus Family PI861_16720 PF00912 Transglycosylase PI861_16720 PF00905 Penicillin binding protein transpeptidase domain PI861_16730 PF02568 Thiamine biosynthesis protein (ThiI) PI861_16730 PF02926 THUMP domain PI861_16740 PF03458 UPF0126 domain PI861_16745 PF00700 Bacterial flagellin C-terminal helical region PI861_16745 PF07196 Flagellin hook IN motif PI861_16745 PF00669 Bacterial flagellin N-terminal helical region PI861_16750 PF00700 Bacterial flagellin C-terminal helical region PI861_16750 PF00669 Bacterial flagellin N-terminal helical region PI861_16760 PF07196 Flagellin hook IN motif PI861_16760 PF07195 Flagellar hook-associated protein 2 C-terminus PI861_16760 PF02465 Flagellar hook-associated protein 2 N-terminus PI861_16765 PF02561 Flagellar protein FliS PI861_16785 PF01497 Periplasmic binding protein PI861_16795 PF01048 Phosphorylase superfamily PI861_16805 PF02535 ZIP Zinc transporter PI861_16810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_16810 PF00672 HAMP domain PI861_16815 PF00459 Inositol monophosphatase family PI861_16825 PF00043 Glutathione S-transferase, C-terminal domain PI861_16825 PF02798 Glutathione S-transferase, N-terminal domain PI861_16840 PF00528 Binding-protein-dependent transport system inner membrane component PI861_16845 PF00528 Binding-protein-dependent transport system inner membrane component PI861_16845 PF12911 N-terminal TM domain of oligopeptide transport permease C PI861_16850 PF00005 ABC transporter PI861_16855 PF07690 Major Facilitator Superfamily PI861_16860 PF03466 LysR substrate binding domain PI861_16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_16865 PF02634 FdhD/NarQ family PI861_16880 PF05164 Cell division protein ZapA PI861_16885 PF03695 Uncharacterised protein family (UPF0149) PI861_16890 PF01494 FAD binding domain PI861_16895 PF01494 FAD binding domain PI861_16900 PF08669 Glycine cleavage T-protein C-terminal barrel domain PI861_16900 PF01571 Aminomethyltransferase folate-binding domain PI861_16905 PF01597 Glycine cleavage H-protein PI861_16910 PF02347 Glycine cleavage system P-protein PI861_16920 PF07690 Major Facilitator Superfamily PI861_16925 PF13192 Thioredoxin domain PI861_16925 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_16930 PF10417 C-terminal domain of 1-Cys peroxiredoxin PI861_16930 PF00578 AhpC/TSA family PI861_16935 PF00571 CBS domain PI861_16940 PF02547 Queuosine biosynthesis protein PI861_16945 PF01702 Queuine tRNA-ribosyltransferase PI861_16950 PF02699 Preprotein translocase subunit PI861_16955 PF13721 SecD export protein N-terminal TM region PI861_16955 PF07549 SecD/SecF GG Motif PI861_16955 PF02355 Protein export membrane protein PI861_16960 PF02355 Protein export membrane protein PI861_16960 PF07549 SecD/SecF GG Motif PI861_16965 PF00581 Rhodanese-like domain PI861_16970 PF07719 Tetratricopeptide repeat PI861_16970 PF13181 Tetratricopeptide repeat PI861_16975 PF01136 Peptidase family U32 PI861_16980 PF01136 Peptidase family U32 PI861_16985 PF02036 SCP-2 sterol transfer family PI861_16995 PF00588 SpoU rRNA Methylase family PI861_17000 PF02082 Transcriptional regulator PI861_17005 PF00266 Aminotransferase class-V PI861_17010 PF01592 NifU-like N terminal domain PI861_17015 PF01521 Iron-sulphur cluster biosynthesis PI861_17020 PF07743 HSCB C-terminal oligomerisation domain PI861_17020 PF00226 DnaJ domain PI861_17025 PF00012 Hsp70 protein PI861_17030 PF00111 2Fe-2S iron-sulfur cluster binding domain PI861_17035 PF12404 Peptidase PI861_17035 PF00883 Cytosol aminopeptidase family, catalytic domain PI861_17040 PF12404 Peptidase PI861_17040 PF00883 Cytosol aminopeptidase family, catalytic domain PI861_17045 PF00334 Nucleoside diphosphate kinase PI861_17050 PF04055 Radical SAM superfamily PI861_17060 PF13464 Domain of unknown function (DUF4115) PI861_17065 PF04551 GcpE protein PI861_17070 PF03129 Anticodon binding domain PI861_17070 PF13393 Histidyl-tRNA synthetase PI861_17075 PF09976 Tetratricopeptide repeat-like domain PI861_17080 PF13360 PQQ-like domain PI861_17085 PF01926 50S ribosome-binding GTPase PI861_17085 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PI861_17090 PF07191 zinc-ribbons PI861_17095 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_17095 PF01464 Transglycosylase SLT domain PI861_17100 PF02769 AIR synthase related protein, C-terminal domain PI861_17100 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PI861_17100 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PI861_17110 PF05661 Protein of unknown function (DUF808) PI861_17120 PF01432 Peptidase family M3 PI861_17120 PF08439 Oligopeptidase F PI861_17125 PF05728 Uncharacterised protein family (UPF0227) PI861_17130 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_17135 PF01906 Putative heavy-metal-binding PI861_17145 PF17676 LD-carboxypeptidase C-terminal domain PI861_17145 PF02016 LD-carboxypeptidase N-terminal domain PI861_17150 PF00884 Sulfatase PI861_17160 PF00696 Amino acid kinase family PI861_17160 PF01842 ACT domain PI861_17165 PF00696 Amino acid kinase family PI861_17165 PF00583 Acetyltransferase (GNAT) family PI861_17170 PF01625 Peptide methionine sulfoxide reductase PI861_17210 PF02308 MgtC family PI861_17225 PF02687 FtsX-like permease family PI861_17225 PF12704 MacB-like periplasmic core domain PI861_17240 PF03600 Citrate transporter PI861_17265 PF01593 Flavin containing amine oxidoreductase PI861_17270 PF03239 Iron permease FTR1 family PI861_17300 PF00324 Amino acid permease PI861_17310 PF03618 Kinase/pyrophosphorylase PI861_17315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PI861_17315 PF00391 PEP-utilising enzyme, mobile domain PI861_17315 PF02896 PEP-utilising enzyme, TIM barrel domain PI861_17325 PF14310 Fibronectin type III-like domain PI861_17325 PF00933 Glycosyl hydrolase family 3 N terminal domain PI861_17325 PF01915 Glycosyl hydrolase family 3 C-terminal domain PI861_17335 PF01483 Proprotein convertase P-domain PI861_17335 PF00082 Subtilase family PI861_17355 PF03180 NLPA lipoprotein PI861_17360 PF01569 PAP2 superfamily PI861_17365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI861_17365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI861_17365 PF11890 Domain of unknown function (DUF3410) PI861_17370 PF01118 Semialdehyde dehydrogenase, NAD binding domain PI861_17370 PF02774 Semialdehyde dehydrogenase, dimerisation domain PI861_17380 PF01416 tRNA pseudouridine synthase PI861_17385 PF01039 Carboxyl transferase domain PI861_17385 PF17848 Acetyl-coA carboxylase zinc finger domain PI861_17390 PF08245 Mur ligase middle domain PI861_17390 PF02875 Mur ligase family, glutamate ligase domain PI861_17395 PF05036 Sporulation related domain PI861_17400 PF04358 DsrC like protein PI861_17405 PF12805 FUSC-like inner membrane protein yccS PI861_17410 PF01027 Inhibitor of apoptosis-promoting Bax1 PI861_17420 PF08447 PAS fold PI861_17420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_17430 PF00849 RNA pseudouridylate synthase PI861_17440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI861_17455 PF14497 Glutathione S-transferase, C-terminal domain PI861_17455 PF02798 Glutathione S-transferase, N-terminal domain PI861_17460 PF00043 Glutathione S-transferase, C-terminal domain PI861_17460 PF13417 Glutathione S-transferase, N-terminal domain PI861_17470 PF13592 Winged helix-turn helix PI861_17470 PF13358 DDE superfamily endonuclease PI861_17475 PF03577 Peptidase family C69 PI861_17480 PF13537 Glutamine amidotransferase domain PI861_17480 PF00733 Asparagine synthase PI861_17490 PF00999 Sodium/hydrogen exchanger family PI861_17490 PF02254 TrkA-N domain PI861_17495 PF13344 Haloacid dehalogenase-like hydrolase PI861_17500 PF00962 Adenosine/AMP deaminase PI861_17505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PI861_17510 PF03471 Transporter associated domain PI861_17510 PF03741 Integral membrane protein TerC family PI861_17520 PF02913 FAD linked oxidases, C-terminal domain PI861_17520 PF01565 FAD binding domain PI861_17520 PF13183 4Fe-4S dicluster domain PI861_17530 PF03061 Thioesterase superfamily PI861_17535 PF00271 Helicase conserved C-terminal domain PI861_17535 PF00270 DEAD/DEAH box helicase PI861_17535 PF03880 DbpA RNA binding domain PI861_17545 PF00563 EAL domain PI861_17545 PF00990 Diguanylate cyclase, GGDEF domain PI861_17545 PF13188 PAS domain PI861_17545 PF03707 Bacterial signalling protein N terminal repeat PI861_17550 PF03553 Na+/H+ antiporter family PI861_17550 PF13726 Na+-H+ antiporter family PI861_17555 PF00929 Exonuclease PI861_17560 PF00672 HAMP domain PI861_17560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_17560 PF12729 Four helix bundle sensory module for signal transduction PI861_17565 PF00691 OmpA family PI861_17565 PF18393 MotY N-terminal domain PI861_17570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PI861_17575 PF00730 HhH-GPD superfamily base excision DNA repair protein PI861_17575 PF00633 Helix-hairpin-helix motif PI861_17575 PF10576 Iron-sulfur binding domain of endonuclease III PI861_17580 PF02508 Rnf-Nqr subunit, membrane protein PI861_17585 PF04205 FMN-binding domain PI861_17590 PF03116 NQR2, RnfD, RnfE family PI861_17595 PF10531 SLBB domain PI861_17595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PI861_17595 PF12838 4Fe-4S dicluster domain PI861_17595 PF13375 RnfC Barrel sandwich hybrid domain PI861_17600 PF04060 Putative Fe-S cluster PI861_17605 PF02508 Rnf-Nqr subunit, membrane protein PI861_17610 PF00892 EamA-like transporter family PI861_17640 PF13358 DDE superfamily endonuclease PI861_17640 PF13592 Winged helix-turn helix PI861_17655 PF01740 STAS domain PI861_17655 PF00916 Sulfate permease family PI861_17690 PF05947 Type VI secretion system, TssF PI861_17710 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE PI861_17720 PF00004 ATPase family associated with various cellular activities (AAA) PI861_17720 PF07724 AAA domain (Cdc48 subfamily) PI861_17720 PF17871 AAA lid domain PI861_17720 PF10431 C-terminal, D2-small domain, of ClpB protein PI861_17725 PF02954 Bacterial regulatory protein, Fis family PI861_17725 PF00158 Sigma-54 interaction domain PI861_17735 PF06744 Type VI secretion protein IcmF C-terminal PI861_17735 PF06761 Intracellular multiplication and human macrophage-killing PI861_17735 PF14331 ImcF-related N-terminal domain PI861_17785 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PI861_17785 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PI861_17790 PF00313 'Cold-shock' DNA-binding domain PI861_17795 PF02617 ATP-dependent Clp protease adaptor protein ClpS PI861_17800 PF10431 C-terminal, D2-small domain, of ClpB protein PI861_17800 PF07724 AAA domain (Cdc48 subfamily) PI861_17800 PF00004 ATPase family associated with various cellular activities (AAA) PI861_17800 PF17871 AAA lid domain PI861_17800 PF02861 Clp amino terminal domain, pathogenicity island component PI861_17805 PF01176 Translation initiation factor 1A / IF-1 PI861_17810 PF04377 Arginine-tRNA-protein transferase, C terminus PI861_17810 PF04376 Arginine-tRNA-protein transferase, N terminus PI861_17815 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PI861_17820 PF05433 Glycine zipper 2TM domain PI861_17825 PF17158 Membrane-associated sensor, integral membrane domain PI861_17825 PF00990 Diguanylate cyclase, GGDEF domain PI861_17830 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_17840 PF01037 Lrp/AsnC ligand binding domain PI861_17845 PF01580 FtsK/SpoIIIE family PI861_17845 PF09397 Ftsk gamma domain PI861_17845 PF17854 FtsK alpha domain PI861_17845 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PI861_17850 PF17854 FtsK alpha domain PI861_17850 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PI861_17850 PF01580 FtsK/SpoIIIE family PI861_17850 PF09397 Ftsk gamma domain PI861_17855 PF03548 Outer membrane lipoprotein carrier protein LolA PI861_17860 PF00004 ATPase family associated with various cellular activities (AAA) PI861_17860 PF16193 AAA C-terminal domain PI861_17860 PF12002 MgsA AAA+ ATPase C terminal PI861_17865 PF02403 Seryl-tRNA synthetase N-terminal domain PI861_17865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PI861_17870 PF02674 Colicin V production protein PI861_17875 PF00156 Phosphoribosyl transferase domain PI861_17885 PF00005 ABC transporter PI861_17890 PF00005 ABC transporter PI861_17890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI861_17895 PF00528 Binding-protein-dependent transport system inner membrane component PI861_17895 PF12911 N-terminal TM domain of oligopeptide transport permease C PI861_17900 PF00528 Binding-protein-dependent transport system inner membrane component PI861_17905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_17910 PF02954 Bacterial regulatory protein, Fis family PI861_17910 PF00158 Sigma-54 interaction domain PI861_17915 PF04012 PspA/IM30 family PI861_17920 PF06667 Phage shock protein B PI861_17930 PF04317 YcjX-like family, DUF463 PI861_17935 PF05128 Domain of unknown function (DUF697) PI861_17940 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PI861_17945 PF01329 Pterin 4 alpha carbinolamine dehydratase PI861_17950 PF00158 Sigma-54 interaction domain PI861_17950 PF18024 Helix-turn-helix domain PI861_17955 PF13689 YfiR/HmsC-like PI861_17960 PF17152 Periplasmic sensor domain PI861_17960 PF00990 Diguanylate cyclase, GGDEF domain PI861_17965 PF00691 OmpA family PI861_17970 PF03741 Integral membrane protein TerC family PI861_17980 PF08891 YfcL protein PI861_17985 PF00501 AMP-binding enzyme PI861_17990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PI861_17990 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region PI861_17995 PF04172 LrgB-like family PI861_18000 PF03788 LrgA family PI861_18015 PF08411 Exonuclease C-terminal PI861_18015 PF00929 Exonuclease PI861_18025 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_18030 PF00795 Carbon-nitrogen hydrolase PI861_18035 PF00155 Aminotransferase class I and II PI861_18045 PF03466 LysR substrate binding domain PI861_18045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_18050 PF11762 L-arabinose isomerase C-terminal domain PI861_18050 PF02610 L-arabinose isomerase PI861_18055 PF00596 Class II Aldolase and Adducin N-terminal domain PI861_18060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PI861_18065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI861_18070 PF00005 ABC transporter PI861_18075 PF02653 Branched-chain amino acid transport system / permease component PI861_18080 PF02311 AraC-like ligand binding domain PI861_18080 PF12833 Helix-turn-helix domain PI861_18085 PF10509 Galactokinase galactose-binding signature PI861_18085 PF08544 GHMP kinases C terminal PI861_18085 PF00288 GHMP kinases N terminal domain PI861_18090 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain PI861_18090 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain PI861_18095 PF16363 GDP-mannose 4,6 dehydratase PI861_18100 PF00356 Bacterial regulatory proteins, lacI family PI861_18105 PF02264 LamB porin PI861_18110 PF07745 Glycosyl hydrolase family 53 PI861_18115 PF07745 Glycosyl hydrolase family 53 PI861_18125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_18125 PF12729 Four helix bundle sensory module for signal transduction PI861_18125 PF00672 HAMP domain PI861_18145 PF13416 Bacterial extracellular solute-binding protein PI861_18150 PF00528 Binding-protein-dependent transport system inner membrane component PI861_18155 PF00528 Binding-protein-dependent transport system inner membrane component PI861_18160 PF07745 Glycosyl hydrolase family 53 PI861_18165 PF02449 Beta-galactosidase PI861_18165 PF08533 Beta-galactosidase C-terminal domain PI861_18165 PF08532 Beta-galactosidase trimerisation domain PI861_18170 PF02378 Phosphotransferase system, EIIC PI861_18170 PF00367 phosphotransferase system, EIIB PI861_18175 PF00224 Pyruvate kinase, barrel domain PI861_18175 PF02887 Pyruvate kinase, alpha/beta domain PI861_18180 PF00444 Ribosomal protein L36 PI861_18185 PF01197 Ribosomal protein L31 PI861_18200 PF01863 Protein of unknown function DUF45 PI861_18215 PF03606 C4-dicarboxylate anaerobic carrier PI861_18225 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PI861_18225 PF01266 FAD dependent oxidoreductase PI861_18230 PF02801 Beta-ketoacyl synthase, C-terminal domain PI861_18230 PF00109 Beta-ketoacyl synthase, N-terminal domain PI861_18245 PF00285 Citrate synthase, C-terminal domain PI861_18250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PI861_18255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PI861_18260 PF00890 FAD binding domain PI861_18260 PF02910 Fumarate reductase flavoprotein C-term PI861_18265 PF13085 2Fe-2S iron-sulfur cluster binding domain PI861_18270 PF16078 2-oxoglutarate dehydrogenase N-terminus PI861_18270 PF00676 Dehydrogenase E1 component PI861_18270 PF16870 2-oxoglutarate dehydrogenase C-terminal PI861_18270 PF02779 Transketolase, pyrimidine binding domain PI861_18275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PI861_18275 PF00364 Biotin-requiring enzyme PI861_18275 PF02817 e3 binding domain PI861_18280 PF00549 CoA-ligase PI861_18280 PF08442 ATP-grasp domain PI861_18285 PF02629 CoA binding domain PI861_18285 PF00549 CoA-ligase PI861_18290 PF03692 Putative zinc- or iron-chelating domain PI861_18295 PF01228 Glycine radical PI861_18295 PF02901 Pyruvate formate lyase-like PI861_18300 PF01226 Formate/nitrite transporter PI861_18305 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding PI861_18305 PF18381 YcaO cyclodehydratase C-terminal domain PI861_18310 PF01118 Semialdehyde dehydrogenase, NAD binding domain PI861_18310 PF02774 Semialdehyde dehydrogenase, dimerisation domain PI861_18315 PF05193 Peptidase M16 inactive domain PI861_18315 PF00675 Insulinase (Peptidase family M16) PI861_18320 PF01053 Cys/Met metabolism PLP-dependent enzyme PI861_18330 PF13460 NAD(P)H-binding PI861_18335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_18335 PF03466 LysR substrate binding domain PI861_18340 PF00106 short chain dehydrogenase PI861_18345 PF06445 GyrI-like small molecule binding domain PI861_18345 PF12833 Helix-turn-helix domain PI861_18350 PF07715 TonB-dependent Receptor Plug Domain PI861_18350 PF00593 TonB dependent receptor PI861_18360 PF03466 LysR substrate binding domain PI861_18360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_18365 PF08267 Cobalamin-independent synthase, N-terminal domain PI861_18365 PF01717 Cobalamin-independent synthase, Catalytic domain PI861_18380 PF07969 Amidohydrolase family PI861_18390 PF01266 FAD dependent oxidoreductase PI861_18395 PF04244 Deoxyribodipyrimidine photo-lyase-related protein PI861_18405 PF01212 Beta-eliminating lyase PI861_18410 PF00768 D-alanyl-D-alanine carboxypeptidase PI861_18420 PF03918 Cytochrome C biogenesis protein PI861_18425 PF08534 Redoxin PI861_18430 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PI861_18430 PF01578 Cytochrome C assembly protein PI861_18435 PF03916 Polysulphide reductase, NrfD PI861_18440 PF13247 4Fe-4S dicluster domain PI861_18440 PF00037 4Fe-4S binding domain PI861_18445 PF13435 Cytochrome c554 and c-prime PI861_18445 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) PI861_18450 PF02335 Cytochrome c552 PI861_18455 PF02754 Cysteine-rich domain PI861_18455 PF13183 4Fe-4S dicluster domain PI861_18460 PF00890 FAD binding domain PI861_18465 PF01266 FAD dependent oxidoreductase PI861_18465 PF04324 BFD-like [2Fe-2S] binding domain PI861_18470 PF02810 SEC-C motif PI861_18475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_18475 PF00672 HAMP domain PI861_18475 PF17200 Single Cache domain 2 PI861_18480 PF01047 MarR family PI861_18480 PF00480 ROK family PI861_18485 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PI861_18485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_18485 PF00989 PAS fold PI861_18485 PF17203 Single cache domain 3 PI861_18490 PF12431 Transcriptional regulator PI861_18490 PF08279 HTH domain PI861_18490 PF00072 Response regulator receiver domain PI861_18495 PF01970 Tripartite tricarboxylate transporter TctA family PI861_18510 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_18510 PF01464 Transglycosylase SLT domain PI861_18515 PF06826 Predicted Permease Membrane Region PI861_18515 PF02080 TrkA-C domain PI861_18525 PF17757 UvrB interaction domain PI861_18525 PF12344 Ultra-violet resistance protein B PI861_18525 PF02151 UvrB/uvrC motif PI861_18525 PF04851 Type III restriction enzyme, res subunit PI861_18525 PF00271 Helicase conserved C-terminal domain PI861_18535 PF09335 SNARE associated Golgi protein PI861_18540 PF02600 Disulfide bond formation protein DsbB PI861_18545 PF06450 Bacterial Na+/H+ antiporter B (NhaB) PI861_18550 PF07840 FadR C-terminal domain PI861_18550 PF00392 Bacterial regulatory proteins, gntR family PI861_18555 PF04293 SpoVR like protein PI861_18560 PF04285 Protein of unknown function (DUF444) PI861_18565 PF06798 PrkA serine protein kinase C-terminal domain PI861_18565 PF08298 PrkA AAA domain PI861_18570 PF00271 Helicase conserved C-terminal domain PI861_18570 PF00570 HRDC domain PI861_18570 PF16124 RecQ zinc-binding PI861_18570 PF09382 RQC domain PI861_18570 PF00270 DEAD/DEAH box helicase PI861_18575 PF00375 Sodium:dicarboxylate symporter family PI861_18580 PF03222 Tryptophan/tyrosine permease family PI861_18585 PF00293 NUDIX domain PI861_18615 PF00343 Carbohydrate phosphorylase PI861_18620 PF00939 Sodium:sulfate symporter transmembrane region PI861_18625 PF00085 Thioredoxin PI861_18630 PF01627 Hpt domain PI861_18630 PF00072 Response regulator receiver domain PI861_18630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PI861_18630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_18630 PF00512 His Kinase A (phospho-acceptor) domain PI861_18630 PF00672 HAMP domain PI861_18640 PF00664 ABC transporter transmembrane region PI861_18640 PF00005 ABC transporter PI861_18655 PF01575 MaoC like domain PI861_18660 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PI861_18660 PF00561 alpha/beta hydrolase fold PI861_18680 PF08543 Phosphomethylpyrimidine kinase PI861_18685 PF03992 Antibiotic biosynthesis monooxygenase PI861_18690 PF00465 Iron-containing alcohol dehydrogenase PI861_18710 PF01928 CYTH domain PI861_18725 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PI861_18735 PF13673 Acetyltransferase (GNAT) domain PI861_18740 PF00270 DEAD/DEAH box helicase PI861_18740 PF00271 Helicase conserved C-terminal domain PI861_18745 PF00255 Glutathione peroxidase PI861_18755 PF01820 D-ala D-ala ligase N-terminus PI861_18755 PF07478 D-ala D-ala ligase C-terminus PI861_18765 PF03942 DTW domain PI861_18770 PF01925 Sulfite exporter TauE/SafE PI861_18775 PF03466 LysR substrate binding domain PI861_18775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_18785 PF12833 Helix-turn-helix domain PI861_18785 PF14525 AraC-binding-like domain PI861_18790 PF11398 Protein of unknown function (DUF2813) PI861_18800 PF13592 Winged helix-turn helix PI861_18800 PF13358 DDE superfamily endonuclease PI861_18845 PF00883 Cytosol aminopeptidase family, catalytic domain PI861_18845 PF02789 Cytosol aminopeptidase family, N-terminal domain PI861_18850 PF13419 Haloacid dehalogenase-like hydrolase PI861_18880 PF13592 Winged helix-turn helix PI861_18880 PF13358 DDE superfamily endonuclease PI861_18900 PF00365 Phosphofructokinase PI861_18905 PF00121 Triosephosphate isomerase PI861_18910 PF02698 DUF218 domain PI861_18915 PF13847 Methyltransferase domain PI861_18920 PF03882 MukF winged-helix domain PI861_18920 PF17192 MukF middle domain PI861_18920 PF17193 MukF C-terminal domain PI861_18925 PF04288 MukE-like family PI861_18930 PF16330 MukB hinge domain PI861_18930 PF04310 MukB N-terminal PI861_18935 PF05036 Sporulation related domain PI861_18935 PF03330 Lytic transglycolase PI861_18995 PF07152 YaeQ protein PI861_19005 PF07690 Major Facilitator Superfamily PI861_19010 PF00005 ABC transporter PI861_19015 PF01032 FecCD transport family PI861_19035 PF05433 Glycine zipper 2TM domain PI861_19045 PF03606 C4-dicarboxylate anaerobic carrier PI861_19060 PF03466 LysR substrate binding domain PI861_19060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_19065 PF01261 Xylose isomerase-like TIM barrel PI861_19070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PI861_19070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PI861_19075 PF03466 LysR substrate binding domain PI861_19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_19085 PF03279 Bacterial lipid A biosynthesis acyltransferase PI861_19090 PF03279 Bacterial lipid A biosynthesis acyltransferase PI861_19105 PF00990 Diguanylate cyclase, GGDEF domain PI861_19115 PF00136 DNA polymerase family B PI861_19115 PF03104 DNA polymerase family B, exonuclease domain PI861_19140 PF01554 MatE PI861_19145 PF06786 Uncharacterised protein family (UPF0253) PI861_19150 PF00677 Lumazine binding domain PI861_19160 PF13419 Haloacid dehalogenase-like hydrolase PI861_19165 PF02222 ATP-grasp domain PI861_19170 PF00892 EamA-like transporter family PI861_19175 PF02525 Flavodoxin-like fold PI861_19200 PF13509 S1 domain PI861_19200 PF17783 CvfB-like winged helix domain PI861_19210 PF04269 Protein of unknown function, DUF440 PI861_19220 PF00912 Transglycosylase PI861_19225 PF04269 Protein of unknown function, DUF440 PI861_19230 PF03776 Septum formation topological specificity factor MinE PI861_19235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PI861_19240 PF03775 Septum formation inhibitor MinC, C-terminal domain PI861_19240 PF05209 Septum formation inhibitor MinC, N-terminal domain PI861_19245 PF05166 YcgL domain PI861_19250 PF13406 Transglycosylase SLT domain PI861_19255 PF03313 Serine dehydratase alpha chain PI861_19255 PF03315 Serine dehydratase beta chain PI861_19260 PF03313 Serine dehydratase alpha chain PI861_19260 PF03315 Serine dehydratase beta chain PI861_19265 PF06865 Pyrimidine/purine nucleoside phosphorylase PI861_19270 PF00375 Sodium:dicarboxylate symporter family PI861_19275 PF09278 MerR, DNA binding PI861_19275 PF00376 MerR family regulatory protein PI861_19280 PF02803 Thiolase, C-terminal domain PI861_19280 PF00108 Thiolase, N-terminal domain PI861_19285 PF00563 EAL domain PI861_19285 PF08668 HDOD domain PI861_19290 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PI861_19295 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PI861_19305 PF04542 Sigma-70 region 2 PI861_19305 PF04545 Sigma-70, region 4 PI861_19320 PF13519 von Willebrand factor type A domain PI861_19320 PF17863 AAA lid domain PI861_19320 PF07728 AAA domain (dynein-related subfamily) PI861_19330 PF01882 Protein of unknown function DUF58 PI861_19335 PF07726 ATPase family associated with various cellular activities (AAA) PI861_19335 PF17863 AAA lid domain PI861_19340 PF00108 Thiolase, N-terminal domain PI861_19340 PF02803 Thiolase, C-terminal domain PI861_19345 PF00378 Enoyl-CoA hydratase/isomerase PI861_19345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PI861_19345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PI861_19350 PF03831 PhnA domain PI861_19350 PF08274 PhnA Zinc-Ribbon PI861_19360 PF00704 Glycosyl hydrolases family 18 PI861_19360 PF08329 Chitinase A, N-terminal domain PI861_19365 PF13358 DDE superfamily endonuclease PI861_19365 PF13592 Winged helix-turn helix PI861_19370 PF13407 Periplasmic binding protein domain PI861_19375 PF00005 ABC transporter PI861_19380 PF02653 Branched-chain amino acid transport system / permease component PI861_19385 PF02653 Branched-chain amino acid transport system / permease component PI861_19390 PF00360 Phytochrome region PI861_19390 PF01590 GAF domain PI861_19390 PF00990 Diguanylate cyclase, GGDEF domain PI861_19390 PF00563 EAL domain PI861_19395 PF04972 BON domain PI861_19420 PF01338 Bacillus thuringiensis toxin PI861_19445 PF13193 AMP-binding enzyme C-terminal domain PI861_19445 PF00501 AMP-binding enzyme PI861_19450 PF08279 HTH domain PI861_19450 PF13280 WYL domain PI861_19460 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PI861_19460 PF01502 Phosphoribosyl-AMP cyclohydrolase PI861_19465 PF00977 Histidine biosynthesis protein PI861_19470 PF00072 Response regulator receiver domain PI861_19470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_19470 PF00512 His Kinase A (phospho-acceptor) domain PI861_19470 PF01627 Hpt domain PI861_19475 PF08448 PAS fold PI861_19475 PF00990 Diguanylate cyclase, GGDEF domain PI861_19480 PF00072 Response regulator receiver domain PI861_19485 PF00977 Histidine biosynthesis protein PI861_19490 PF00117 Glutamine amidotransferase class-I PI861_19495 PF00475 Imidazoleglycerol-phosphate dehydratase PI861_19495 PF08645 Polynucleotide kinase 3 phosphatase PI861_19500 PF00155 Aminotransferase class I and II PI861_19505 PF00815 Histidinol dehydrogenase PI861_19510 PF01634 ATP phosphoribosyltransferase PI861_19510 PF08029 HisG, C-terminal domain PI861_19520 PF04851 Type III restriction enzyme, res subunit PI861_19520 PF13307 Helicase C-terminal domain PI861_19525 PF00814 Glycoprotease family PI861_19535 PF12697 Alpha/beta hydrolase family PI861_19540 PF13193 AMP-binding enzyme C-terminal domain PI861_19540 PF00501 AMP-binding enzyme PI861_19545 PF00570 HRDC domain PI861_19545 PF01612 3'-5' exonuclease PI861_19560 PF01207 Dihydrouridine synthase (Dus) PI861_19565 PF04304 Protein of unknown function (DUF454) PI861_19570 PF00156 Phosphoribosyl transferase domain PI861_19575 PF12169 DNA polymerase III subunits gamma and tau domain III PI861_19575 PF12170 DNA polymerase III tau subunit V interacting with alpha PI861_19575 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PI861_19580 PF02575 YbaB/EbfC DNA-binding family PI861_19585 PF07670 Nucleoside recognition PI861_19590 PF00196 Bacterial regulatory proteins, luxR family PI861_19590 PF00072 Response regulator receiver domain PI861_19595 PF01743 Poly A polymerase head domain PI861_19595 PF02272 DHHA1 domain PI861_19595 PF01368 DHH family PI861_19595 PF00571 CBS domain PI861_19600 PF11898 Domain of unknown function (DUF3418) PI861_19600 PF04408 Helicase associated domain (HA2) PI861_19600 PF00271 Helicase conserved C-terminal domain PI861_19600 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PI861_19600 PF00270 DEAD/DEAH box helicase PI861_19610 PF01386 Ribosomal L25p family PI861_19615 PF00753 Metallo-beta-lactamase superfamily PI861_19625 PF02769 AIR synthase related protein, C-terminal domain PI861_19625 PF00586 AIR synthase related protein, N-terminal domain PI861_19640 PF10672 S-adenosylmethionine-dependent methyltransferase PI861_19640 PF17785 PUA-like domain PI861_19645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_19645 PF00672 HAMP domain PI861_19645 PF12729 Four helix bundle sensory module for signal transduction PI861_19650 PF00708 Acylphosphatase PI861_19655 PF00043 Glutathione S-transferase, C-terminal domain PI861_19655 PF02798 Glutathione S-transferase, N-terminal domain PI861_19665 PF08264 Anticodon-binding domain of tRNA PI861_19665 PF09334 tRNA synthetases class I (M) PI861_19665 PF01588 Putative tRNA binding domain PI861_19670 PF10609 NUBPL iron-transfer P-loop NTPase PI861_19675 PF00485 Phosphoribulokinase / Uridine kinase family PI861_19680 PF00692 dUTPase PI861_19685 PF01384 Phosphate transporter family PI861_19690 PF00575 S1 RNA binding domain PI861_19690 PF12111 Polyribonucleotide phosphorylase C terminal PI861_19690 PF10150 Ribonuclease E/G family PI861_19695 PF00849 RNA pseudouridylate synthase PI861_19695 PF01479 S4 domain PI861_19700 PF13419 Haloacid dehalogenase-like hydrolase PI861_19705 PF02545 Maf-like protein PI861_19710 PF02620 Large ribosomal RNA subunit accumulation protein YceD PI861_19715 PF01783 Ribosomal L32p protein family PI861_19720 PF02504 Fatty acid synthesis protein PI861_19725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PI861_19725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PI861_19730 PF00698 Acyl transferase domain PI861_19740 PF00550 Phosphopantetheine attachment site PI861_19745 PF00109 Beta-ketoacyl synthase, N-terminal domain PI861_19745 PF02801 Beta-ketoacyl synthase, C-terminal domain PI861_19750 PF01063 Amino-transferase class IV PI861_19755 PF02618 YceG-like family PI861_19760 PF02223 Thymidylate kinase PI861_19765 PF09115 DNA polymerase III, delta subunit, C terminal PI861_19770 PF01026 TatD related DNase PI861_19785 PF01189 16S rRNA methyltransferase RsmB/F PI861_19785 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF PI861_19785 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF PI861_19795 PF04403 Paraquat-inducible protein A PI861_19815 PF03972 MmgE/PrpD family PI861_19830 PF06974 Protein of unknown function (DUF1298) PI861_19830 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain PI861_19855 PF00106 short chain dehydrogenase PI861_19925 PF05707 Zonular occludens toxin (Zot) PI861_19930 PF00665 Integrase core domain PI861_19935 PF01695 IstB-like ATP binding protein PI861_20000 PF05707 Zonular occludens toxin (Zot) PI861_20015 PF13654 AAA domain PI861_20015 PF05362 Lon protease (S16) C-terminal proteolytic domain PI861_20020 PF07977 FabA-like domain PI861_20025 PF04957 Ribosome modulation factor PI861_20035 PF00005 ABC transporter PI861_20035 PF16326 ABC transporter C-terminal domain PI861_20035 PF12848 ABC transporter PI861_20045 PF02926 THUMP domain PI861_20045 PF10672 S-adenosylmethionine-dependent methyltransferase PI861_20045 PF01170 Putative RNA methylase family UPF0020 PI861_20050 PF07126 Cell-division protein ZapC PI861_20055 PF01180 Dihydroorotate dehydrogenase PI861_20060 PF05088 Bacterial NAD-glutamate dehydrogenase PI861_20070 PF11940 Domain of unknown function (DUF3458) Ig-like fold PI861_20070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PI861_20070 PF01433 Peptidase family M1 domain PI861_20075 PF17804 Tail specific protease N-terminal domain PI861_20075 PF11818 C-terminal domain of tail specific protease (DUF3340) PI861_20075 PF00595 PDZ domain PI861_20075 PF03572 Peptidase family S41 PI861_20080 PF04352 ProQ/FINO family PI861_20080 PF17516 ProQ C-terminal domain PI861_20085 PF13185 GAF domain PI861_20095 PF00115 Cytochrome C and Quinol oxidase polypeptide I PI861_20110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PI861_20110 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PI861_20120 PF00403 Heavy-metal-associated domain PI861_20135 PF00027 Cyclic nucleotide-binding domain PI861_20135 PF13545 Crp-like helix-turn-helix domain PI861_20140 PF00582 Universal stress protein family PI861_20145 PF01171 PP-loop family PI861_20160 PF00043 Glutathione S-transferase, C-terminal domain PI861_20160 PF02798 Glutathione S-transferase, N-terminal domain PI861_20165 PF05025 RbsD / FucU transport protein family PI861_20175 PF02653 Branched-chain amino acid transport system / permease component PI861_20180 PF13407 Periplasmic binding protein domain PI861_20185 PF00294 pfkB family carbohydrate kinase PI861_20190 PF00356 Bacterial regulatory proteins, lacI family PI861_20195 PF17152 Periplasmic sensor domain PI861_20195 PF00990 Diguanylate cyclase, GGDEF domain PI861_20205 PF02146 Sir2 family PI861_20225 PF00216 Bacterial DNA-binding protein PI861_20230 PF03147 Ferredoxin-fold anticodon binding domain PI861_20230 PF01588 Putative tRNA binding domain PI861_20230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PI861_20230 PF03483 B3/4 domain PI861_20230 PF03484 tRNA synthetase B5 domain PI861_20235 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PI861_20235 PF01409 tRNA synthetases class II core domain (F) PI861_20240 PF00453 Ribosomal protein L20 PI861_20245 PF01632 Ribosomal protein L35 PI861_20250 PF00707 Translation initiation factor IF-3, C-terminal domain PI861_20250 PF05198 Translation initiation factor IF-3, N-terminal domain PI861_20255 PF03129 Anticodon binding domain PI861_20255 PF02824 TGS domain PI861_20255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PI861_20255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PI861_20265 PF04055 Radical SAM superfamily PI861_20275 PF00521 DNA gyrase/topoisomerase IV, subunit A PI861_20275 PF03989 DNA gyrase C-terminal domain, beta-propeller PI861_20285 PF13419 Haloacid dehalogenase-like hydrolase PI861_20290 PF00317 Ribonucleotide reductase, all-alpha domain PI861_20290 PF02867 Ribonucleotide reductase, barrel domain PI861_20290 PF03477 ATP cone domain PI861_20295 PF00268 Ribonucleotide reductase, small chain PI861_20300 PF00111 2Fe-2S iron-sulfur cluster binding domain PI861_20305 PF06725 3D domain PI861_20305 PF03562 MltA specific insert domain PI861_20310 PF06945 Protein of unknown function (DUF1289) PI861_20315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PI861_20315 PF02378 Phosphotransferase system, EIIC PI861_20320 PF00294 pfkB family carbohydrate kinase PI861_20325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PI861_20325 PF00381 PTS HPr component phosphorylation site PI861_20330 PF00356 Bacterial regulatory proteins, lacI family PI861_20330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PI861_20335 PF03222 Tryptophan/tyrosine permease family PI861_20350 PF00270 DEAD/DEAH box helicase PI861_20350 PF00271 Helicase conserved C-terminal domain PI861_20360 PF01264 Chorismate synthase PI861_20365 PF05175 Methyltransferase small domain PI861_20370 PF01713 Smr domain PI861_20375 PF08448 PAS fold PI861_20375 PF00990 Diguanylate cyclase, GGDEF domain PI861_20395 PF13592 Winged helix-turn helix PI861_20395 PF13358 DDE superfamily endonuclease PI861_20430 PF01925 Sulfite exporter TauE/SafE PI861_20435 PF13520 Amino acid permease PI861_20445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PI861_20445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PI861_20450 PF00378 Enoyl-CoA hydratase/isomerase PI861_20455 PF00378 Enoyl-CoA hydratase/isomerase PI861_20460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PI861_20460 PF02770 Acyl-CoA dehydrogenase, middle domain PI861_20460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PI861_20465 PF00171 Aldehyde dehydrogenase family PI861_20470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PI861_20470 PF02770 Acyl-CoA dehydrogenase, middle domain PI861_20470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PI861_20475 PF01039 Carboxyl transferase domain PI861_20480 PF00378 Enoyl-CoA hydratase/isomerase PI861_20485 PF00289 Biotin carboxylase, N-terminal domain PI861_20485 PF00364 Biotin-requiring enzyme PI861_20485 PF02785 Biotin carboxylase C-terminal domain PI861_20485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PI861_20490 PF00682 HMGL-like PI861_20495 PF00376 MerR family regulatory protein PI861_20495 PF09278 MerR, DNA binding PI861_20510 PF01184 GPR1/FUN34/yaaH family PI861_20520 PF00583 Acetyltransferase (GNAT) family PI861_20525 PF01235 Sodium:alanine symporter family PI861_20530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PI861_20530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PI861_20530 PF00378 Enoyl-CoA hydratase/isomerase PI861_20545 PF04341 Protein of unknown function, DUF485 PI861_20550 PF00474 Sodium:solute symporter family PI861_20555 PF00005 ABC transporter PI861_20555 PF12848 ABC transporter PI861_20560 PF13145 PPIC-type PPIASE domain PI861_20565 PF00216 Bacterial DNA-binding protein PI861_20570 PF00004 ATPase family associated with various cellular activities (AAA) PI861_20570 PF05362 Lon protease (S16) C-terminal proteolytic domain PI861_20570 PF02190 ATP-dependent protease La (LON) substrate-binding domain PI861_20575 PF06689 ClpX C4-type zinc finger PI861_20575 PF10431 C-terminal, D2-small domain, of ClpB protein PI861_20575 PF07724 AAA domain (Cdc48 subfamily) PI861_20580 PF00574 Clp protease PI861_20585 PF05697 Bacterial trigger factor protein (TF) PI861_20585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PI861_20585 PF05698 Bacterial trigger factor protein (TF) C-terminus PI861_20600 PF02687 FtsX-like permease family PI861_20600 PF12704 MacB-like periplasmic core domain PI861_20605 PF00005 ABC transporter PI861_20610 PF02687 FtsX-like permease family PI861_20610 PF12704 MacB-like periplasmic core domain PI861_20620 PF02559 CarD-like/TRCF domain PI861_20620 PF00270 DEAD/DEAH box helicase PI861_20620 PF00271 Helicase conserved C-terminal domain PI861_20620 PF03461 TRCF domain PI861_20620 PF17757 UvrB interaction domain PI861_20625 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PI861_20630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_20635 PF00892 EamA-like transporter family PI861_20645 PF00300 Histidine phosphatase superfamily (branch 1) PI861_20650 PF05193 Peptidase M16 inactive domain PI861_20650 PF16187 Middle or third domain of peptidase_M16 PI861_20650 PF00675 Insulinase (Peptidase family M16) PI861_20655 PF05724 Thiopurine S-methyltransferase (TPMT) PI861_20670 PF13592 Winged helix-turn helix PI861_20670 PF13358 DDE superfamily endonuclease PI861_20685 PF00958 GMP synthase C terminal domain PI861_20685 PF00117 Glutamine amidotransferase class-I PI861_20685 PF02540 NAD synthase PI861_20690 PF00571 CBS domain PI861_20690 PF00478 IMP dehydrogenase / GMP reductase domain PI861_20700 PF01618 MotA/TolQ/ExbB proton channel family PI861_20705 PF02472 Biopolymer transport protein ExbD/TolR PI861_20710 PF01292 Prokaryotic cytochrome b561 PI861_20715 PF02601 Exonuclease VII, large subunit PI861_20715 PF13742 OB-fold nucleic acid binding domain PI861_20720 PF04055 Radical SAM superfamily PI861_20730 PF00793 DAHP synthetase I family PI861_20735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PI861_20740 PF00266 Aminotransferase class-V PI861_20745 PF01012 Electron transfer flavoprotein domain PI861_20745 PF00766 Electron transfer flavoprotein FAD-binding domain PI861_20750 PF01012 Electron transfer flavoprotein domain PI861_20760 PF01544 CorA-like Mg2+ transporter protein PI861_20765 PF11143 Protein of unknown function (DUF2919) PI861_20780 PF07715 TonB-dependent Receptor Plug Domain PI861_20780 PF00593 TonB dependent receptor PI861_20785 PF01032 FecCD transport family PI861_20790 PF01032 FecCD transport family PI861_20795 PF00005 ABC transporter PI861_20800 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PI861_20800 PF01648 4'-phosphopantetheinyl transferase superfamily PI861_20805 PF01497 Periplasmic binding protein PI861_20810 PF00668 Condensation domain PI861_20810 PF16197 Ketoacyl-synthetase C-terminal extension PI861_20810 PF00109 Beta-ketoacyl synthase, N-terminal domain PI861_20810 PF02801 Beta-ketoacyl synthase, C-terminal domain PI861_20810 PF08659 KR domain PI861_20810 PF00550 Phosphopantetheine attachment site PI861_20810 PF14765 Polyketide synthase dehydratase PI861_20810 PF13193 AMP-binding enzyme C-terminal domain PI861_20810 PF00501 AMP-binding enzyme PI861_20815 PF00501 AMP-binding enzyme PI861_20815 PF13193 AMP-binding enzyme C-terminal domain PI861_20815 PF00668 Condensation domain PI861_20815 PF07993 Male sterility protein PI861_20815 PF00550 Phosphopantetheine attachment site PI861_20825 PF00550 Phosphopantetheine attachment site PI861_20825 PF00668 Condensation domain PI861_20825 PF00975 Thioesterase domain PI861_20825 PF00501 AMP-binding enzyme PI861_20825 PF13193 AMP-binding enzyme C-terminal domain PI861_20830 PF00857 Isochorismatase family PI861_20830 PF00550 Phosphopantetheine attachment site PI861_20835 PF00501 AMP-binding enzyme PI861_20835 PF13193 AMP-binding enzyme C-terminal domain PI861_20840 PF00425 chorismate binding enzyme PI861_20845 PF07273 Protein of unknown function (DUF1439) PI861_20855 PF00483 Nucleotidyl transferase PI861_20860 PF00990 Diguanylate cyclase, GGDEF domain PI861_20860 PF00563 EAL domain PI861_20860 PF03707 Bacterial signalling protein N terminal repeat PI861_20875 PF00672 HAMP domain PI861_20875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_20875 PF17200 Single Cache domain 2 PI861_20880 PF00294 pfkB family carbohydrate kinase PI861_20885 PF01124 MAPEG family PI861_20890 PF00762 Ferrochelatase PI861_20895 PF05191 Adenylate kinase, active site lid PI861_20900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_20900 PF00183 Hsp90 protein PI861_20905 PF13662 Toprim domain PI861_20905 PF02132 RecR protein PI861_20910 PF02634 FdhD/NarQ family PI861_20915 PF00158 Sigma-54 interaction domain PI861_20915 PF01590 GAF domain PI861_20915 PF02954 Bacterial regulatory protein, Fis family PI861_20930 PF13247 4Fe-4S dicluster domain PI861_20930 PF12800 4Fe-4S binding domain PI861_20935 PF07693 KAP family P-loop domain PI861_20950 PF02705 K+ potassium transporter PI861_20955 PF00037 4Fe-4S binding domain PI861_20955 PF12798 4Fe-4S binding domain PI861_20960 PF00361 Proton-conducting membrane transporter PI861_20965 PF00146 NADH dehydrogenase PI861_20970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PI861_20970 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PI861_20970 PF00374 Nickel-dependent hydrogenase PI861_20975 PF12838 4Fe-4S dicluster domain PI861_20980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PI861_20985 PF07450 Formate hydrogenlyase maturation protein HycH PI861_20990 PF01750 Hydrogenase maturation protease PI861_21000 PF12390 Selenocysteine synthase N terminal PI861_21000 PF03841 L-seryl-tRNA selenium transferase PI861_21005 PF00009 Elongation factor Tu GTP binding domain PI861_21005 PF03144 Elongation factor Tu domain 2 PI861_21005 PF09106 Elongation factor SelB, winged helix PI861_21005 PF09107 Elongation factor SelB, winged helix PI861_21010 PF07503 HypF finger PI861_21010 PF00708 Acylphosphatase PI861_21010 PF01300 Telomere recombination PI861_21010 PF17788 HypF Kae1-like domain PI861_21015 PF01455 HupF/HypC family PI861_21020 PF01924 Hydrogenase formation hypA family PI861_21025 PF00586 AIR synthase related protein, N-terminal domain PI861_21025 PF02769 AIR synthase related protein, C-terminal domain PI861_21030 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PI861_21035 PF02492 CobW/HypB/UreG, nucleotide-binding domain PI861_21040 PF08402 TOBE domain PI861_21040 PF00005 ABC transporter PI861_21045 PF00005 ABC transporter PI861_21050 PF12911 N-terminal TM domain of oligopeptide transport permease C PI861_21050 PF00528 Binding-protein-dependent transport system inner membrane component PI861_21055 PF00528 Binding-protein-dependent transport system inner membrane component PI861_21060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_21065 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE PI861_21070 PF01750 Hydrogenase maturation protease PI861_21075 PF00374 Nickel-dependent hydrogenase PI861_21080 PF03916 Polysulphide reductase, NrfD PI861_21085 PF13247 4Fe-4S dicluster domain PI861_21090 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal PI861_21090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PI861_21095 PF00842 Alanine racemase, C-terminal domain PI861_21095 PF01168 Alanine racemase, N-terminal domain PI861_21110 PF10722 Putative bacterial sensory transduction regulator PI861_21120 PF00265 Thymidine kinase PI861_21125 PF03553 Na+/H+ antiporter family PI861_21130 PF13358 DDE superfamily endonuclease PI861_21130 PF13592 Winged helix-turn helix PI861_21135 PF00816 H-NS histone family PI861_21140 PF01923 Cobalamin adenosyltransferase PI861_21145 PF12843 Putative quorum-sensing-regulated virulence factor PI861_21150 PF04055 Radical SAM superfamily PI861_21155 PF06508 Queuosine biosynthesis protein QueC PI861_21170 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PI861_21175 PF18073 Rubredoxin metal binding domain PI861_21185 PF00216 Bacterial DNA-binding protein PI861_21190 PF00575 S1 RNA binding domain PI861_21195 PF02224 Cytidylate kinase PI861_21200 PF00925 GTP cyclohydrolase II PI861_21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_21205 PF03466 LysR substrate binding domain PI861_21210 PF03466 LysR substrate binding domain PI861_21210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_21215 PF07690 Major Facilitator Superfamily PI861_21230 PF00881 Nitroreductase family PI861_21235 PF03707 Bacterial signalling protein N terminal repeat PI861_21235 PF00563 EAL domain PI861_21235 PF00990 Diguanylate cyclase, GGDEF domain PI861_21240 PF13358 DDE superfamily endonuclease PI861_21240 PF13592 Winged helix-turn helix PI861_21250 PF03466 LysR substrate binding domain PI861_21250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_21255 PF00072 Response regulator receiver domain PI861_21265 PF01212 Beta-eliminating lyase PI861_21270 PF00106 short chain dehydrogenase PI861_21280 PF00248 Aldo/keto reductase family PI861_21285 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PI861_21295 PF00005 ABC transporter PI861_21300 PF00528 Binding-protein-dependent transport system inner membrane component PI861_21305 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_21310 PF00528 Binding-protein-dependent transport system inner membrane component PI861_21315 PF03411 Penicillin-insensitive murein endopeptidase PI861_21325 PF04536 TPM domain PI861_21340 PF01618 MotA/TolQ/ExbB proton channel family PI861_21345 PF13677 Membrane MotB of proton-channel complex MotA/MotB PI861_21345 PF00691 OmpA family PI861_21350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PI861_21355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PI861_21360 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PI861_21360 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PI861_21370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PI861_21370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PI861_21375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PI861_21375 PF00384 Molybdopterin oxidoreductase PI861_21375 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PI861_21380 PF00146 NADH dehydrogenase PI861_21385 PF12838 4Fe-4S dicluster domain PI861_21390 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PI861_21395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PI861_21400 PF00361 Proton-conducting membrane transporter PI861_21400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PI861_21405 PF00361 Proton-conducting membrane transporter PI861_21410 PF00361 Proton-conducting membrane transporter PI861_21425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_21425 PF08447 PAS fold PI861_21425 PF13426 PAS domain PI861_21430 PF02355 Protein export membrane protein PI861_21430 PF07549 SecD/SecF GG Motif PI861_21435 PF02355 Protein export membrane protein PI861_21435 PF07549 SecD/SecF GG Motif PI861_21435 PF13721 SecD export protein N-terminal TM region PI861_21470 PF01230 HIT domain PI861_21475 PF00672 HAMP domain PI861_21475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PI861_21485 PF01979 Amidohydrolase family PI861_21500 PF00375 Sodium:dicarboxylate symporter family PI861_21510 PF01168 Alanine racemase, N-terminal domain PI861_21510 PF00842 Alanine racemase, C-terminal domain PI861_21515 PF03741 Integral membrane protein TerC family PI861_21520 PF00005 ABC transporter PI861_21520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI861_21530 PF00005 ABC transporter PI861_21530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PI861_21535 PF00528 Binding-protein-dependent transport system inner membrane component PI861_21535 PF12911 N-terminal TM domain of oligopeptide transport permease C PI861_21540 PF00528 Binding-protein-dependent transport system inner membrane component PI861_21545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PI861_21550 PF01914 MarC family integral membrane protein PI861_21560 PF00465 Iron-containing alcohol dehydrogenase PI861_21560 PF00171 Aldehyde dehydrogenase family PI861_21565 PF01966 HD domain PI861_21565 PF11871 Domain of unknown function (DUF3391) PI861_21570 PF06580 Histidine kinase PI861_21570 PF07694 5TMR of 5TMR-LYT PI861_21575 PF00072 Response regulator receiver domain PI861_21575 PF04397 LytTr DNA-binding domain PI861_21580 PF02554 Carbon starvation protein CstA PI861_21585 PF11742 Protein of unknown function (DUF3302) PI861_21590 PF00529 HlyD membrane-fusion protein of T1SS PI861_21590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PI861_21595 PF04851 Type III restriction enzyme, res subunit PI861_21595 PF00271 Helicase conserved C-terminal domain PI861_21600 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PI861_21605 PF00462 Glutaredoxin PI861_21615 PF00155 Aminotransferase class I and II PI861_21620 PF03606 C4-dicarboxylate anaerobic carrier PI861_21625 PF07055 Enoyl reductase FAD binding domain PI861_21625 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PI861_21625 PF12241 Trans-2-enoyl-CoA reductase catalytic region PI861_21705 PF00005 ABC transporter PI861_21705 PF00664 ABC transporter transmembrane region PI861_21705 PF03412 Peptidase C39 family PI861_21710 PF16199 Radical_SAM C-terminal domain PI861_21710 PF04055 Radical SAM superfamily PI861_21715 PF00310 Glutamine amidotransferases class-II PI861_21715 PF04898 Glutamate synthase central domain PI861_21715 PF01645 Conserved region in glutamate synthase PI861_21715 PF01493 GXGXG motif PI861_21720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PI861_21720 PF07992 Pyridine nucleotide-disulphide oxidoreductase PI861_21735 PF00376 MerR family regulatory protein PI861_21735 PF09278 MerR, DNA binding PI861_21760 PF00271 Helicase conserved C-terminal domain PI861_21760 PF00270 DEAD/DEAH box helicase PI861_21765 PF13302 Acetyltransferase (GNAT) domain PI861_21780 PF08378 Nuclease-related domain PI861_21790 PF13592 Winged helix-turn helix PI861_21790 PF13358 DDE superfamily endonuclease PI861_21800 PF07759 Protein of unknown function (DUF1615) PI861_21805 PF00682 HMGL-like PI861_21805 PF08502 LeuA allosteric (dimerisation) domain PI861_21810 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PI861_21810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PI861_21810 PF02142 MGS-like domain PI861_21815 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PI861_21815 PF00117 Glutamine amidotransferase class-I PI861_21820 PF05173 Dihydrodipicolinate reductase, C-terminus PI861_21820 PF01113 Dihydrodipicolinate reductase, N-terminus PI861_21840 PF01812 5-formyltetrahydrofolate cyclo-ligase family PI861_21845 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PI861_21850 PF01842 ACT domain PI861_21850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PI861_21850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PI861_21855 PF01219 Prokaryotic diacylglycerol kinase PI861_21860 PF00793 DAHP synthetase I family PI861_21865 PF00005 ABC transporter PI861_21870 PF01032 FecCD transport family PI861_21875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PI861_21875 PF00512 His Kinase A (phospho-acceptor) domain PI861_21875 PF00989 PAS fold PI861_21875 PF00072 Response regulator receiver domain PI861_21875 PF00497 Bacterial extracellular solute-binding proteins, family 3 PI861_21875 PF01627 Hpt domain PI861_21885 PF00437 Type II/IV secretion system protein PI861_21890 PF00483 Nucleotidyl transferase PI861_21905 PF07664 Ferrous iron transport protein B C terminus PI861_21905 PF02421 Ferrous iron transport protein B PI861_21905 PF07670 Nucleoside recognition PI861_21915 PF01253 Translation initiation factor SUI1 PI861_21920 PF01169 Uncharacterized protein family UPF0016 PI861_21970 PF13358 DDE superfamily endonuclease PI861_21970 PF13592 Winged helix-turn helix PI861_21975 PF09190 DALR domain PI861_21975 PF01406 tRNA synthetases class I (C) catalytic domain PI861_21980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PI861_21990 PF00149 Calcineurin-like phosphoesterase PI861_22010 PF03466 LysR substrate binding domain PI861_22010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PI861_22020 PF02899 Phage integrase, N-terminal SAM-like domain PI861_22020 PF00589 Phage integrase family PI861_22030 PF00717 Peptidase S24-like PI861_22045 PF06892 Phage regulatory protein CII (CP76) PI861_22245 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system PI861_22275 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PI861_22280 PF04221 RelB antitoxin PI861_22330 PF05713 Bacterial mobilisation protein (MobC) PI861_22345 PF04837 MbeB-like, N-term conserved region PI861_22370 PF00872 Transposase, Mutator family PI861_22455 PF03496 ADP-ribosyltransferase exoenzyme PI861_22465 PF01312 FlhB HrpN YscU SpaS Family PI861_22470 PF01311 Bacterial export proteins, family 1 PI861_22475 PF01313 Bacterial export proteins, family 3 PI861_22480 PF00813 FliP family PI861_22485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI861_22500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI861_22500 PF18269 T3SS EscN ATPase C-terminal domain PI861_22500 PF02874 ATP synthase alpha/beta family, beta-barrel domain PI861_22505 PF07201 HrpJ-like domain PI861_22510 PF09059 TyeA PI861_22520 PF09474 Type III secretion system YscX (type_III_YscX) PI861_22530 PF00771 FHIPEP family PI861_22535 PF09621 Type III secretion system regulator (LcrR) PI861_22540 PF07216 LcrG protein PI861_22545 PF04792 V antigen (LcrV) protein PI861_22550 PF07720 Tetratricopeptide repeat PI861_22555 PF04888 Secretion system effector C (SseC) like family PI861_22560 PF05844 YopD protein PI861_22565 PF05932 Tir chaperone protein (CesT) family PI861_22575 PF09619 Type III secretion system lipoprotein chaperone (YscW) PI861_22580 PF12833 Helix-turn-helix domain PI861_22590 PF05932 Tir chaperone protein (CesT) family PI861_22595 PF03958 Bacterial type II/III secretion system short domain PI861_22595 PF00263 Bacterial type II and III secretion system protein PI861_22600 PF16693 Inner membrane component of T3SS, periplasmic domain PI861_22600 PF16697 Inner membrane component of T3SS, cytoplasmic domain PI861_22610 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF PI861_22615 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) PI861_22620 PF09025 YopR, type III needle-polymerisation regulator PI861_22625 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI PI861_22630 PF01514 Secretory protein of YscJ/FliF family PI861_22635 PF06578 YOP proteins translocation protein K (YscK) PI861_22640 PF02108 Flagellar assembly protein FliH PI861_22650 PF01548 Transposase PI861_22650 PF02371 Transposase IS116/IS110/IS902 family PI861_22670 PF00872 Transposase, Mutator family PI861_22675 PF18340 DNA relaxase TraI 2B/2B-like domain PI861_22675 PF07057 DNA helicase TraI PI861_22675 PF18272 single-stranded DNA binding TraI N-terminal subdomain PI861_22675 PF08751 TrwC relaxase PI861_22680 PF12615 F sex factor protein N terminal PI861_22680 PF10412 Type IV secretion-system coupling protein DNA-binding domain PI861_22685 PF05818 Enterobacterial TraT complement resistance protein PI861_22695 PF07916 TraG-like protein, N-terminal region PI861_22700 PF06122 Conjugative relaxosome accessory transposon protein PI861_22705 PF13728 F plasmid transfer operon protein PI861_22715 PF06986 Type-1V conjugative transfer system mating pair stabilisation PI861_22725 PF09673 Type-F conjugative transfer system pilin assembly protein PI861_22730 PF06834 TraU protein PI861_22735 PF12477 Sex factor F TraW protein N terminal PI861_22745 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer PI861_22750 PF09676 Type IV conjugative transfer system lipoprotein (TraV) PI861_22755 PF03743 Bacterial conjugation TrbI-like protein PI861_22765 PF05309 TraE protein PI861_22770 PF07178 TraL protein PI861_22775 PF05513 TraA PI861_22800 PF13614 AAA domain PI861_22815 PF00816 H-NS histone family PI861_22840 PF00665 Integrase core domain PI861_22845 PF01695 IstB-like ATP binding protein PI861_22870 PF01906 Putative heavy-metal-binding PI861_22875 PF13358 DDE superfamily endonuclease PI861_22875 PF13592 Winged helix-turn helix PI861_22885 PF09013 YopH, N-terminal PI861_22885 PF00102 Protein-tyrosine phosphatase PI861_22900 PF00872 Transposase, Mutator family PI861_22910 PF13614 AAA domain PI861_22920 PF00816 H-NS histone family PI861_22950 PF13614 AAA domain PI861_22955 PF02796 Helix-turn-helix domain of resolvase PI861_22955 PF00239 Resolvase, N terminal domain PI861_22965 PF00884 Sulfatase PI861_22965 PF08019 Phosphoethanolamine transferase EptA/EptB PI861_22970 PF00884 Sulfatase PI861_22970 PF08019 Phosphoethanolamine transferase EptA/EptB PI861_22990 PF01848 Hok/gef family PI861_22995 PF01695 IstB-like ATP binding protein PI861_23000 PF00665 Integrase core domain PI861_23030 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PI861_23040 PF04002 RadC-like JAB domain PI861_23060 PF01555 DNA methylase PI861_23075 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A PI861_23090 PF01464 Transglycosylase SLT domain PI861_23105 PF02796 Helix-turn-helix domain of resolvase PI861_23105 PF00239 Resolvase, N terminal domain PI861_23120 PF13700 Domain of unknown function (DUF4158) PI861_23120 PF01526 Tn3 transposase DDE domain PI861_23140 PF13614 AAA domain PI861_23155 PF00589 Phage integrase family PI861_23250 PF01548 Transposase PI861_23250 PF02371 Transposase IS116/IS110/IS902 family PI861_23265 PF00069 Protein kinase domain PI861_23265 PF09632 Rac1-binding domain PI861_23275 PF01848 Hok/gef family PI861_23300 PF13592 Winged helix-turn helix PI861_23300 PF13358 DDE superfamily endonuclease PI861_23305 PF00665 Integrase core domain PI861_23310 PF01695 IstB-like ATP binding protein PI861_23315 PF00872 Transposase, Mutator family PI861_23320 PF00561 alpha/beta hydrolase fold PI861_23340 PF03496 ADP-ribosyltransferase exoenzyme PI861_23350 PF01312 FlhB HrpN YscU SpaS Family PI861_23355 PF01311 Bacterial export proteins, family 1 PI861_23360 PF01313 Bacterial export proteins, family 3 PI861_23365 PF00813 FliP family PI861_23370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PI861_23385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PI861_23385 PF02874 ATP synthase alpha/beta family, beta-barrel domain PI861_23385 PF18269 T3SS EscN ATPase C-terminal domain PI861_23390 PF07201 HrpJ-like domain PI861_23395 PF09059 TyeA PI861_23405 PF09474 Type III secretion system YscX (type_III_YscX) PI861_23425 PF07216 LcrG protein