locus-tag class description GO994_00005 PF00308 Bacterial dnaA protein GO994_00005 PF08299 Bacterial dnaA protein helix-turn-helix GO994_00005 PF11638 DnaA N-terminal domain GO994_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GO994_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GO994_00010 PF02767 DNA polymerase III beta subunit, central domain GO994_00015 PF02463 RecF/RecN/SMC N terminal domain GO994_00020 PF01751 Toprim domain GO994_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_00020 PF18053 DNA gyrase B subunit insert domain GO994_00020 PF00986 DNA gyrase B subunit, carboxyl terminus GO994_00020 PF00204 DNA gyrase B GO994_00035 PF08279 HTH domain GO994_00035 PF13280 WYL domain GO994_00040 PF00011 Hsp20/alpha crystallin family GO994_00045 PF00011 Hsp20/alpha crystallin family GO994_00060 PF00155 Aminotransferase class I and II GO994_00075 PF07690 Major Facilitator Superfamily GO994_00085 PF00072 Response regulator receiver domain GO994_00085 PF00486 Transcriptional regulatory protein, C terminal GO994_00090 PF00512 His Kinase A (phospho-acceptor) domain GO994_00090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_00090 PF13492 GAF domain GO994_00090 PF13493 Domain of unknown function (DUF4118) GO994_00090 PF02702 Osmosensitive K+ channel His kinase sensor domain GO994_00095 PF02669 K+-transporting ATPase, c chain GO994_00115 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_00115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO994_00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_00120 PF00512 His Kinase A (phospho-acceptor) domain GO994_00120 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_00125 PF00873 AcrB/AcrD/AcrF family GO994_00130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_00135 PF00440 Bacterial regulatory proteins, tetR family GO994_00170 PF12146 Serine aminopeptidase, S33 GO994_00175 PF12105 SpoU, rRNA methylase, C-terminal GO994_00175 PF00588 SpoU rRNA Methylase family GO994_00180 PF13291 ACT domain GO994_00180 PF04607 Region found in RelA / SpoT proteins GO994_00180 PF02824 TGS domain GO994_00185 PF01192 RNA polymerase Rpb6 GO994_00190 PF00625 Guanylate kinase GO994_00200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GO994_00215 PF00892 EamA-like transporter family GO994_00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_00235 PF03466 LysR substrate binding domain GO994_00240 PF00579 tRNA synthetases class I (W and Y) GO994_00245 PF00582 Universal stress protein family GO994_00250 PF07055 Enoyl reductase FAD binding domain GO994_00250 PF12241 Trans-2-enoyl-CoA reductase catalytic region GO994_00250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GO994_00255 PF08448 PAS fold GO994_00255 PF00990 Diguanylate cyclase, GGDEF domain GO994_00260 PF00210 Ferritin-like domain GO994_00270 PF01810 LysE type translocator GO994_00310 PF13808 DDE_Tnp_1-associated GO994_00310 PF01609 Transposase DDE domain GO994_00315 PF00989 PAS fold GO994_00315 PF01627 Hpt domain GO994_00315 PF00072 Response regulator receiver domain GO994_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_00315 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_00315 PF00512 His Kinase A (phospho-acceptor) domain GO994_00325 PF06580 Histidine kinase GO994_00325 PF07694 5TMR of 5TMR-LYT GO994_00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_00330 PF00072 Response regulator receiver domain GO994_00330 PF04397 LytTr DNA-binding domain GO994_00335 PF07690 Major Facilitator Superfamily GO994_00340 PF02222 ATP-grasp domain GO994_00340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GO994_00345 PF00731 AIR carboxylase GO994_00360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_00360 PF03466 LysR substrate binding domain GO994_00365 PF00593 TonB dependent receptor GO994_00365 PF07715 TonB-dependent Receptor Plug Domain GO994_00370 PF01177 Asp/Glu/Hydantoin racemase GO994_00400 PF13607 Succinyl-CoA ligase like flavodoxin domain GO994_00400 PF13380 CoA binding domain GO994_00400 PF00583 Acetyltransferase (GNAT) family GO994_00415 PF03466 LysR substrate binding domain GO994_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_00420 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GO994_00420 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GO994_00425 PF00342 Phosphoglucose isomerase GO994_00435 PF05552 Conserved TM helix GO994_00435 PF00924 Mechanosensitive ion channel GO994_00440 PF00440 Bacterial regulatory proteins, tetR family GO994_00445 PF00692 dUTPase GO994_00450 PF02441 Flavoprotein GO994_00450 PF04127 DNA / pantothenate metabolism flavoprotein GO994_00455 PF04002 RadC-like JAB domain GO994_00460 PF00830 Ribosomal L28 family GO994_00465 PF00471 Ribosomal protein L33 GO994_00475 PF06827 Zinc finger found in FPG and IleRS GO994_00475 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GO994_00475 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GO994_00480 PF04393 Protein of unknown function (DUF535) GO994_00485 PF01467 Cytidylyltransferase-like GO994_00490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GO994_00495 PF00535 Glycosyl transferase family 2 GO994_00500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GO994_00505 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GO994_00510 PF03611 PTS system sugar-specific permease component GO994_00520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GO994_00525 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GO994_00525 PF00356 Bacterial regulatory proteins, lacI family GO994_00550 PF03748 Flagellar basal body-associated protein FliL GO994_00555 PF04345 Chorismate lyase GO994_00560 PF01040 UbiA prenyltransferase family GO994_00565 PF01553 Acyltransferase GO994_00570 PF01726 LexA DNA binding domain GO994_00570 PF00717 Peptidase S24-like GO994_00580 PF02630 SCO1/SenC GO994_00585 PF01554 MatE GO994_00590 PF00588 SpoU rRNA Methylase family GO994_00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_00595 PF00512 His Kinase A (phospho-acceptor) domain GO994_00595 PF16527 Two-component sensor protein CpxA, periplasmic domain GO994_00595 PF00672 HAMP domain GO994_00600 PF00486 Transcriptional regulatory protein, C terminal GO994_00600 PF00072 Response regulator receiver domain GO994_00605 PF01545 Cation efflux family GO994_00605 PF16916 Dimerisation domain of Zinc Transporter GO994_00610 PF00132 Bacterial transferase hexapeptide (six repeats) GO994_00610 PF06426 Serine acetyltransferase, N-terminal GO994_00620 PF06005 Cell division protein ZapB GO994_00630 PF01367 5'-3' exonuclease, C-terminal SAM fold GO994_00630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GO994_00630 PF00476 DNA polymerase family A GO994_00630 PF01612 3'-5' exonuclease GO994_00635 PF00132 Bacterial transferase hexapeptide (six repeats) GO994_00685 PF00356 Bacterial regulatory proteins, lacI family GO994_00695 PF03781 Sulfatase-modifying factor enzyme 1 GO994_00695 PF12867 DinB superfamily GO994_00705 PF00756 Putative esterase GO994_00710 PF08240 Alcohol dehydrogenase GroES-like domain GO994_00710 PF00107 Zinc-binding dehydrogenase GO994_00715 PF03466 LysR substrate binding domain GO994_00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_00740 PF00580 UvrD/REP helicase N-terminal domain GO994_00740 PF13361 UvrD-like helicase C-terminal domain GO994_00780 PF01810 LysE type translocator GO994_00785 PF04143 Sulphur transport GO994_00790 PF01609 Transposase DDE domain GO994_00790 PF13808 DDE_Tnp_1-associated GO994_00800 PF00202 Aminotransferase class-III GO994_00805 PF00171 Aldehyde dehydrogenase family GO994_00810 PF00117 Glutamine amidotransferase class-I GO994_00810 PF00958 GMP synthase C terminal domain GO994_00810 PF02540 NAD synthase GO994_00815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GO994_00815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GO994_00820 PF00294 pfkB family carbohydrate kinase GO994_00825 PF02082 Transcriptional regulator GO994_00840 PF02646 RmuC family GO994_00845 PF02386 Cation transport protein GO994_00850 PF02254 TrkA-N domain GO994_00850 PF02080 TrkA-C domain GO994_00855 PF01029 NusB family GO994_00855 PF01189 16S rRNA methyltransferase RsmB/F GO994_00860 PF02911 Formyl transferase, C-terminal domain GO994_00860 PF00551 Formyl transferase GO994_00865 PF01327 Polypeptide deformylase GO994_00870 PF01476 LysM domain GO994_00895 PF04361 Protein of unknown function (DUF494) GO994_00900 PF01396 Topoisomerase DNA binding C4 zinc finger GO994_00905 PF00731 AIR carboxylase GO994_00910 PF01300 Telomere recombination GO994_00915 PF01218 Coproporphyrinogen III oxidase GO994_00920 PF08501 Shikimate dehydrogenase substrate binding domain GO994_00920 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GO994_00920 PF01488 Shikimate / quinate 5-dehydrogenase GO994_00925 PF07369 Protein of unknown function (DUF1488) GO994_00940 PF01926 50S ribosome-binding GTPase GO994_00945 PF00034 Cytochrome c GO994_00950 PF04220 Der GTPase activator (YihI) GO994_00955 PF10675 Protein of unknown function (DUF2489) GO994_00960 PF04055 Radical SAM superfamily GO994_00960 PF06969 HemN C-terminal domain GO994_00965 PF00962 Adenosine/AMP deaminase GO994_00970 PF02954 Bacterial regulatory protein, Fis family GO994_00970 PF00072 Response regulator receiver domain GO994_00970 PF00158 Sigma-54 interaction domain GO994_00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_00975 PF00512 His Kinase A (phospho-acceptor) domain GO994_00975 PF00989 PAS fold GO994_00985 PF03951 Glutamine synthetase, beta-Grasp domain GO994_00985 PF00120 Glutamine synthetase, catalytic domain GO994_00995 PF03631 Virulence factor BrkB GO994_01000 PF02580 D-Tyr-tRNA(Tyr) deacylase GO994_01010 PF00583 Acetyltransferase (GNAT) family GO994_01010 PF09500 Putative thioesterase (yiiD_Cterm) GO994_01020 PF00271 Helicase conserved C-terminal domain GO994_01020 PF00270 DEAD/DEAH box helicase GO994_01020 PF17191 RecG wedge domain GO994_01025 PF13091 PLD-like domain GO994_01030 PF02447 GntP family permease GO994_01035 PF01202 Shikimate kinase GO994_01040 PF00920 Dehydratase family GO994_01045 PF01081 KDPG and KHG aldolase GO994_01050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GO994_01050 PF00356 Bacterial regulatory proteins, lacI family GO994_01060 PF01551 Peptidase family M23 GO994_01065 PF01676 Metalloenzyme superfamily GO994_01065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GO994_01070 PF00581 Rhodanese-like domain GO994_01075 PF02556 Preprotein translocase subunit SecB GO994_01080 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GO994_01080 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GO994_01085 PF01106 NifU-like domain GO994_01085 PF01521 Iron-sulphur cluster biosynthesis GO994_01090 PF00156 Phosphoribosyl transferase domain GO994_01095 PF00561 alpha/beta hydrolase fold GO994_01115 PF00575 S1 RNA binding domain GO994_01115 PF17674 HHH domain GO994_01115 PF09371 Tex-like protein N-terminal domain GO994_01115 PF16921 Tex protein YqgF-like domain GO994_01120 PF03449 Transcription elongation factor, N-terminal GO994_01120 PF01272 Transcription elongation factor, GreA/GreB, C-term GO994_01125 PF00486 Transcriptional regulatory protein, C terminal GO994_01125 PF00072 Response regulator receiver domain GO994_01130 PF00672 HAMP domain GO994_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_01130 PF00512 His Kinase A (phospho-acceptor) domain GO994_01140 PF00338 Ribosomal protein S10p/S20e GO994_01145 PF00297 Ribosomal protein L3 GO994_01150 PF00573 Ribosomal protein L4/L1 family GO994_01155 PF00276 Ribosomal protein L23 GO994_01160 PF00181 Ribosomal Proteins L2, RNA binding domain GO994_01160 PF03947 Ribosomal Proteins L2, C-terminal domain GO994_01165 PF00203 Ribosomal protein S19 GO994_01170 PF00237 Ribosomal protein L22p/L17e GO994_01175 PF00189 Ribosomal protein S3, C-terminal domain GO994_01175 PF07650 KH domain GO994_01180 PF00252 Ribosomal protein L16p/L10e GO994_01185 PF00831 Ribosomal L29 protein GO994_01190 PF00366 Ribosomal protein S17 GO994_01195 PF00238 Ribosomal protein L14p/L23e GO994_01200 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GO994_01205 PF00281 Ribosomal protein L5 GO994_01205 PF00673 ribosomal L5P family C-terminus GO994_01210 PF00253 Ribosomal protein S14p/S29e GO994_01215 PF00410 Ribosomal protein S8 GO994_01220 PF00347 Ribosomal protein L6 GO994_01225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GO994_01230 PF03719 Ribosomal protein S5, C-terminal domain GO994_01230 PF00333 Ribosomal protein S5, N-terminal domain GO994_01235 PF00327 Ribosomal protein L30p/L7e GO994_01240 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GO994_01245 PF00344 SecY translocase GO994_01250 PF00444 Ribosomal protein L36 GO994_01255 PF00416 Ribosomal protein S13/S18 GO994_01260 PF00411 Ribosomal protein S11 GO994_01265 PF00163 Ribosomal protein S4/S9 N-terminal domain GO994_01265 PF01479 S4 domain GO994_01270 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GO994_01270 PF01000 RNA polymerase Rpb3/RpoA insert domain GO994_01270 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GO994_01275 PF01196 Ribosomal protein L17 GO994_01320 PF00860 Permease family GO994_01325 PF02733 Dak1 domain GO994_01330 PF02734 DAK2 domain GO994_01335 PF00381 PTS HPr component phosphorylation site GO994_01335 PF05524 PEP-utilising enzyme, N-terminal GO994_01335 PF00391 PEP-utilising enzyme, mobile domain GO994_01335 PF03610 PTS system fructose IIA component GO994_01340 PF00465 Iron-containing alcohol dehydrogenase GO994_01345 PF00989 PAS fold GO994_01345 PF02954 Bacterial regulatory protein, Fis family GO994_01345 PF00158 Sigma-54 interaction domain GO994_01350 PF01594 AI-2E family transporter GO994_01360 PF01609 Transposase DDE domain GO994_01360 PF13808 DDE_Tnp_1-associated GO994_01370 PF00696 Amino acid kinase family GO994_01375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GO994_01375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GO994_01380 PF03606 C4-dicarboxylate anaerobic carrier GO994_01385 PF02863 Arginine repressor, C-terminal domain GO994_01385 PF01316 Arginine repressor, DNA binding domain GO994_01390 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GO994_01390 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GO994_01395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GO994_01395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GO994_01410 PF02666 Phosphatidylserine decarboxylase GO994_01415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_01415 PF00672 HAMP domain GO994_01415 PF02743 Cache domain GO994_01420 PF08212 Lipocalin-like domain GO994_01430 PF00465 Iron-containing alcohol dehydrogenase GO994_01435 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GO994_01435 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GO994_01435 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GO994_01440 PF02233 NAD(P) transhydrogenase beta subunit GO994_01450 PF13309 HTH domain GO994_01450 PF08348 YheO-like PAS domain GO994_01455 PF03313 Serine dehydratase alpha chain GO994_01460 PF00375 Sodium:dicarboxylate symporter family GO994_01465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO994_01465 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_01470 PF13525 Outer membrane lipoprotein GO994_01475 PF01479 S4 domain GO994_01475 PF00849 RNA pseudouridylate synthase GO994_01485 PF02861 Clp amino terminal domain, pathogenicity island component GO994_01485 PF10431 C-terminal, D2-small domain, of ClpB protein GO994_01485 PF00004 ATPase family associated with various cellular activities (AAA) GO994_01485 PF07724 AAA domain (Cdc48 subfamily) GO994_01485 PF17871 AAA lid domain GO994_01490 PF03590 Aspartate-ammonia ligase GO994_01495 PF01037 Lrp/AsnC ligand binding domain GO994_01505 PF10063 Uncharacterized integral membrane protein (DUF2301) GO994_01510 PF00571 CBS domain GO994_01510 PF00478 IMP dehydrogenase / GMP reductase domain GO994_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_01530 PF00512 His Kinase A (phospho-acceptor) domain GO994_01540 PF00072 Response regulator receiver domain GO994_01540 PF00158 Sigma-54 interaction domain GO994_01545 PF06496 Protein of unknown function (DUF1097) GO994_01555 PF00174 Oxidoreductase molybdopterin binding domain GO994_01560 PF01794 Ferric reductase like transmembrane component GO994_01575 PF00072 Response regulator receiver domain GO994_01575 PF00486 Transcriptional regulatory protein, C terminal GO994_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_01580 PF08918 PhoQ Sensor GO994_01590 PF00384 Molybdopterin oxidoreductase GO994_01590 PF18364 Molybdopterin oxidoreductase N-terminal domain GO994_01590 PF01568 Molydopterin dinucleotide binding domain GO994_01595 PF03264 NapC/NirT cytochrome c family, N-terminal region GO994_01600 PF01751 Toprim domain GO994_01600 PF01131 DNA topoisomerase GO994_01605 PF02386 Cation transport protein GO994_01610 PF02080 TrkA-C domain GO994_01610 PF02254 TrkA-N domain GO994_01615 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GO994_01615 PF01565 FAD binding domain GO994_01620 PF02237 Biotin protein ligase C terminal domain GO994_01620 PF03099 Biotin/lipoate A/B protein ligase family GO994_01620 PF08279 HTH domain GO994_01625 PF00485 Phosphoribulokinase / Uridine kinase family GO994_01640 PF03143 Elongation factor Tu C-terminal domain GO994_01640 PF00009 Elongation factor Tu GTP binding domain GO994_01640 PF03144 Elongation factor Tu domain 2 GO994_01650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GO994_01655 PF02357 Transcription termination factor nusG GO994_01655 PF00467 KOW motif GO994_01660 PF03946 Ribosomal protein L11, N-terminal domain GO994_01660 PF00298 Ribosomal protein L11, RNA binding domain GO994_01665 PF00687 Ribosomal protein L1p/L10e family GO994_01670 PF00466 Ribosomal protein L10 GO994_01675 PF00542 Ribosomal protein L7/L12 C-terminal domain GO994_01675 PF16320 Ribosomal protein L7/L12 dimerisation domain GO994_01680 PF04563 RNA polymerase beta subunit GO994_01680 PF00562 RNA polymerase Rpb2, domain 6 GO994_01680 PF04561 RNA polymerase Rpb2, domain 2 GO994_01680 PF10385 RNA polymerase beta subunit external 1 domain GO994_01680 PF04560 RNA polymerase Rpb2, domain 7 GO994_01680 PF04565 RNA polymerase Rpb2, domain 3 GO994_01685 PF00623 RNA polymerase Rpb1, domain 2 GO994_01685 PF04983 RNA polymerase Rpb1, domain 3 GO994_01685 PF04997 RNA polymerase Rpb1, domain 1 GO994_01685 PF05000 RNA polymerase Rpb1, domain 4 GO994_01685 PF04998 RNA polymerase Rpb1, domain 5 GO994_01690 PF13309 HTH domain GO994_01690 PF08348 YheO-like PAS domain GO994_01695 PF01042 Endoribonuclease L-PSP GO994_01700 PF02635 DsrE/DsrF-like family GO994_01705 PF02635 DsrE/DsrF-like family GO994_01710 PF04077 DsrH like protein GO994_01715 PF00164 Ribosomal protein S12/S23 GO994_01720 PF00177 Ribosomal protein S7p/S5e GO994_01725 PF03144 Elongation factor Tu domain 2 GO994_01725 PF00679 Elongation factor G C-terminus GO994_01725 PF00009 Elongation factor Tu GTP binding domain GO994_01725 PF03764 Elongation factor G, domain IV GO994_01725 PF14492 Elongation Factor G, domain II GO994_01730 PF03144 Elongation factor Tu domain 2 GO994_01730 PF03143 Elongation factor Tu C-terminal domain GO994_01730 PF00009 Elongation factor Tu GTP binding domain GO994_01800 PF03922 OmpW family GO994_01820 PF02219 Methylenetetrahydrofolate reductase GO994_01830 PF03594 Benzoate membrane transport protein GO994_01835 PF07883 Cupin domain GO994_01835 PF01381 Helix-turn-helix GO994_01865 PF04363 Protein of unknown function (DUF496) GO994_01875 PF04751 Protein of unknown function (DUF615) GO994_01880 PF01523 Putative modulator of DNA gyrase GO994_01885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GO994_01890 PF01722 BolA-like protein GO994_01900 PF05494 MlaC protein GO994_01905 PF02470 MlaD protein GO994_01910 PF02405 Permease MlaE GO994_01915 PF00005 ABC transporter GO994_01920 PF01380 SIS domain GO994_01920 PF00571 CBS domain GO994_01930 PF06835 Lipopolysaccharide-assembly, LptC-related GO994_01935 PF03968 OstA-like protein GO994_01940 PF12399 Branched-chain amino acid ATP-binding cassette transporter GO994_01940 PF00005 ABC transporter GO994_01945 PF00309 Sigma-54 factor, Activator interacting domain (AID) GO994_01945 PF04963 Sigma-54 factor, core binding domain GO994_01945 PF04552 Sigma-54, DNA binding domain GO994_01950 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GO994_01955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GO994_01960 PF03668 P-loop ATPase protein family GO994_01965 PF00381 PTS HPr component phosphorylation site GO994_01970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GO994_01970 PF02378 Phosphotransferase system, EIIC GO994_01970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GO994_01975 PF07071 KDGP aldolase GO994_01980 PF03841 L-seryl-tRNA selenium transferase GO994_01985 PF01979 Amidohydrolase family GO994_02020 PF13180 PDZ domain GO994_02025 PF00595 PDZ domain GO994_02025 PF13180 PDZ domain GO994_02035 PF03969 AFG1-like ATPase GO994_02040 PF00572 Ribosomal protein L13 GO994_02045 PF00380 Ribosomal protein S9/S16 GO994_02050 PF00355 Rieske [2Fe-2S] domain GO994_02050 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GO994_02055 PF00032 Cytochrome b(C-terminal)/b6/petD GO994_02055 PF00033 Cytochrome b/b6/petB GO994_02060 PF02167 Cytochrome C1 family GO994_02065 PF02798 Glutathione S-transferase, N-terminal domain GO994_02065 PF00043 Glutathione S-transferase, C-terminal domain GO994_02070 PF04386 Stringent starvation protein B GO994_02075 PF04972 BON domain GO994_02080 PF13580 SIS domain GO994_02090 PF04348 LppC putative lipoprotein GO994_02095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GO994_02110 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GO994_02115 PF00813 FliP family GO994_02120 PF01313 Bacterial export proteins, family 3 GO994_02125 PF01311 Bacterial export proteins, family 1 GO994_02130 PF01312 FlhB HrpN YscU SpaS Family GO994_02135 PF00771 FHIPEP family GO994_02140 PF00158 Sigma-54 interaction domain GO994_02140 PF00072 Response regulator receiver domain GO994_02140 PF02954 Bacterial regulatory protein, Fis family GO994_02145 PF02049 Flagellar hook-basal body complex protein FliE GO994_02150 PF08345 Flagellar M-ring protein C-terminal GO994_02150 PF01514 Secretory protein of YscJ/FliF family GO994_02155 PF14841 FliG middle domain GO994_02155 PF01706 FliG C-terminal domain GO994_02155 PF14842 FliG N-terminal domain GO994_02170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO994_02170 PF18269 T3SS EscN ATPase C-terminal domain GO994_02185 PF04316 Anti-sigma-28 factor, FlgM GO994_02195 PF00460 Flagella basal body rod protein GO994_02200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO994_02200 PF00460 Flagella basal body rod protein GO994_02205 PF03963 Flagellar hook capping protein - N-terminal region GO994_02210 PF00460 Flagella basal body rod protein GO994_02210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO994_02210 PF07559 Flagellar basal body protein FlaE GO994_02215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO994_02215 PF00460 Flagella basal body rod protein GO994_02220 PF00460 Flagella basal body rod protein GO994_02220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO994_02225 PF02107 Flagellar L-ring protein GO994_02230 PF02119 Flagellar P-ring protein GO994_02240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO994_02240 PF00460 Flagella basal body rod protein GO994_02270 PF00700 Bacterial flagellin C-terminal helical region GO994_02270 PF00669 Bacterial flagellin N-terminal helical region GO994_02280 PF02561 Flagellar protein FliS GO994_02300 PF04545 Sigma-70, region 4 GO994_02300 PF04542 Sigma-70 region 2 GO994_02305 PF01618 MotA/TolQ/ExbB proton channel family GO994_02310 PF00691 OmpA family GO994_02310 PF13677 Membrane MotB of proton-channel complex MotA/MotB GO994_02315 PF01464 Transglycosylase SLT domain GO994_02315 PF01476 LysM domain GO994_02325 PF02381 MraZ protein, putative antitoxin-like GO994_02330 PF01795 MraW methylase family GO994_02335 PF04999 Cell division protein FtsL GO994_02340 PF03717 Penicillin-binding Protein dimerisation domain GO994_02340 PF00905 Penicillin binding protein transpeptidase domain GO994_02345 PF08245 Mur ligase middle domain GO994_02345 PF01225 Mur ligase family, catalytic domain GO994_02345 PF02875 Mur ligase family, glutamate ligase domain GO994_02350 PF01225 Mur ligase family, catalytic domain GO994_02350 PF02875 Mur ligase family, glutamate ligase domain GO994_02350 PF08245 Mur ligase middle domain GO994_02355 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GO994_02355 PF00953 Glycosyl transferase family 4 GO994_02360 PF02875 Mur ligase family, glutamate ligase domain GO994_02360 PF08245 Mur ligase middle domain GO994_02365 PF01098 Cell cycle protein GO994_02370 PF04101 Glycosyltransferase family 28 C-terminal domain GO994_02370 PF03033 Glycosyltransferase family 28 N-terminal domain GO994_02375 PF08245 Mur ligase middle domain GO994_02375 PF01225 Mur ligase family, catalytic domain GO994_02375 PF02875 Mur ligase family, glutamate ligase domain GO994_02380 PF03799 Cell division protein FtsQ GO994_02380 PF08478 POTRA domain, FtsQ-type GO994_02385 PF02491 SHS2 domain inserted in FTSA GO994_02390 PF00091 Tubulin/FtsZ family, GTPase domain GO994_02390 PF12327 FtsZ family, C-terminal domain GO994_02395 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GO994_02405 PF02810 SEC-C motif GO994_02405 PF07516 SecA Wing and Scaffold domain GO994_02405 PF07517 SecA DEAD-like domain GO994_02405 PF01043 SecA preprotein cross-linking domain GO994_02415 PF00293 NUDIX domain GO994_02420 PF03884 DNA gyrase inhibitor YacG GO994_02425 PF07072 Cell division protein GO994_02430 PF01121 Dephospho-CoA kinase GO994_02435 PF01478 Type IV leader peptidase family GO994_02435 PF06750 Bacterial Peptidase A24 N-terminal domain GO994_02445 PF00437 Type II/IV secretion system protein GO994_02445 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GO994_02450 PF07963 Prokaryotic N-terminal methylation motif GO994_02455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GO994_02455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GO994_02465 PF01510 N-acetylmuramoyl-L-alanine amidase GO994_02470 PF07729 FCD domain GO994_02470 PF00392 Bacterial regulatory proteins, gntR family GO994_02475 PF17831 Pyruvate dehydrogenase E1 component middle domain GO994_02475 PF00456 Transketolase, thiamine diphosphate binding domain GO994_02480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GO994_02480 PF00364 Biotin-requiring enzyme GO994_02480 PF02817 e3 binding domain GO994_02485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO994_02485 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_02490 PF00563 EAL domain GO994_02490 PF13426 PAS domain GO994_02490 PF05231 MASE1 GO994_02490 PF08448 PAS fold GO994_02490 PF00990 Diguanylate cyclase, GGDEF domain GO994_02490 PF08447 PAS fold GO994_02500 PF12729 Four helix bundle sensory module for signal transduction GO994_02500 PF00672 HAMP domain GO994_02500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_02505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_02505 PF12729 Four helix bundle sensory module for signal transduction GO994_02505 PF00672 HAMP domain GO994_02515 PF11791 Aconitate B N-terminal domain GO994_02515 PF06434 Aconitate hydratase 2 N-terminus GO994_02515 PF00330 Aconitase family (aconitate hydratase) GO994_02525 PF13808 DDE_Tnp_1-associated GO994_02525 PF01609 Transposase DDE domain GO994_02555 PF03466 LysR substrate binding domain GO994_02555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_02560 PF03466 LysR substrate binding domain GO994_02565 PF01810 LysE type translocator GO994_02575 PF07683 Cobalamin synthesis protein cobW C-terminal domain GO994_02575 PF02492 CobW/HypB/UreG, nucleotide-binding domain GO994_02600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GO994_02605 PF02152 Dihydroneopterin aldolase GO994_02610 PF02660 Glycerol-3-phosphate acyltransferase GO994_02700 PF00999 Sodium/hydrogen exchanger family GO994_02710 PF08443 RimK-like ATP-grasp domain GO994_02710 PF18030 RimK PreATP-grasp domain GO994_02720 PF00072 Response regulator receiver domain GO994_02720 PF00486 Transcriptional regulatory protein, C terminal GO994_02760 PF08668 HDOD domain GO994_02770 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) GO994_02775 PF13426 PAS domain GO994_02775 PF08447 PAS fold GO994_02775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_02780 PF08678 Rsbr N terminal GO994_02780 PF01740 STAS domain GO994_02785 PF13581 Histidine kinase-like ATPase domain GO994_02790 PF00512 His Kinase A (phospho-acceptor) domain GO994_02790 PF00072 Response regulator receiver domain GO994_02790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GO994_02790 PF01627 Hpt domain GO994_02790 PF00672 HAMP domain GO994_02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_02795 PF00072 Response regulator receiver domain GO994_02805 PF07690 Major Facilitator Superfamily GO994_02810 PF01914 MarC family integral membrane protein GO994_02820 PF01523 Putative modulator of DNA gyrase GO994_02825 PF00795 Carbon-nitrogen hydrolase GO994_02835 PF13502 AsmA-like C-terminal region GO994_02835 PF13116 Protein of unknown function GO994_02840 PF00575 S1 RNA binding domain GO994_02840 PF10150 Ribonuclease E/G family GO994_02845 PF02545 Maf-like protein GO994_02850 PF04093 rod shape-determining protein MreD GO994_02855 PF04085 rod shape-determining protein MreC GO994_02915 PF00563 EAL domain GO994_02915 PF00990 Diguanylate cyclase, GGDEF domain GO994_02915 PF17157 Gammaproteobacterial periplasmic sensor domain GO994_02925 PF01699 Sodium/calcium exchanger protein GO994_02930 PF00221 Aromatic amino acid lyase GO994_02935 PF17392 Urocanase C-terminal domain GO994_02935 PF17391 Urocanase N-terminal domain GO994_02935 PF01175 Urocanase Rossmann-like domain GO994_02940 PF00491 Arginase family GO994_02945 PF01979 Amidohydrolase family GO994_02950 PF07702 UTRA domain GO994_02950 PF00392 Bacterial regulatory proteins, gntR family GO994_02955 PF00484 Carbonic anhydrase GO994_02960 PF04542 Sigma-70 region 2 GO994_02960 PF00140 Sigma-70 factor, region 1.2 GO994_02960 PF04545 Sigma-70, region 4 GO994_02965 PF18075 FtsX extracellular domain GO994_02970 PF00005 ABC transporter GO994_02975 PF02881 SRP54-type protein, helical bundle domain GO994_02975 PF00448 SRP54-type protein, GTPase domain GO994_03000 PF00440 Bacterial regulatory proteins, tetR family GO994_03010 PF13091 PLD-like domain GO994_03015 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_03015 PF01464 Transglycosylase SLT domain GO994_03025 PF02416 mttA/Hcf106 family GO994_03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_03030 PF03466 LysR substrate binding domain GO994_03035 PF01914 MarC family integral membrane protein GO994_03040 PF10678 Protein of unknown function (DUF2492) GO994_03045 PF00375 Sodium:dicarboxylate symporter family GO994_03055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_03055 PF03466 LysR substrate binding domain GO994_03060 PF13533 Biotin-lipoyl like GO994_03065 PF07690 Major Facilitator Superfamily GO994_03070 PF07947 YhhN family GO994_03095 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GO994_03095 PF00326 Prolyl oligopeptidase family GO994_03110 PF02525 Flavodoxin-like fold GO994_03115 PF02254 TrkA-N domain GO994_03115 PF00999 Sodium/hydrogen exchanger family GO994_03170 PF00271 Helicase conserved C-terminal domain GO994_03170 PF00270 DEAD/DEAH box helicase GO994_03190 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase GO994_03210 PF00445 Ribonuclease T2 family GO994_03250 PF00293 NUDIX domain GO994_03250 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain GO994_03250 PF09297 NADH pyrophosphatase zinc ribbon domain GO994_03255 PF00512 His Kinase A (phospho-acceptor) domain GO994_03255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_03255 PF00672 HAMP domain GO994_03255 PF16527 Two-component sensor protein CpxA, periplasmic domain GO994_03260 PF00486 Transcriptional regulatory protein, C terminal GO994_03260 PF00072 Response regulator receiver domain GO994_03265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_03275 PF00326 Prolyl oligopeptidase family GO994_03275 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GO994_03280 PF05170 AsmA family GO994_03295 PF13808 DDE_Tnp_1-associated GO994_03295 PF01609 Transposase DDE domain GO994_03310 PF08335 GlnD PII-uridylyltransferase GO994_03310 PF03710 Glutamate-ammonia ligase adenylyltransferase GO994_03335 PF13808 DDE_Tnp_1-associated GO994_03335 PF01609 Transposase DDE domain GO994_03340 PF00106 short chain dehydrogenase GO994_03360 PF00455 DeoR C terminal sensor domain GO994_03360 PF08220 DeoR-like helix-turn-helix domain GO994_03365 PF08335 GlnD PII-uridylyltransferase GO994_03365 PF03710 Glutamate-ammonia ligase adenylyltransferase GO994_03390 PF00293 NUDIX domain GO994_03395 PF00107 Zinc-binding dehydrogenase GO994_03395 PF16884 N-terminal domain of oxidoreductase GO994_03400 PF02566 OsmC-like protein GO994_03405 PF01047 MarR family GO994_03420 PF01037 Lrp/AsnC ligand binding domain GO994_03430 PF07690 Major Facilitator Superfamily GO994_03450 PF00209 Sodium:neurotransmitter symporter family GO994_03460 PF00209 Sodium:neurotransmitter symporter family GO994_03485 PF00392 Bacterial regulatory proteins, gntR family GO994_03485 PF00155 Aminotransferase class I and II GO994_03495 PF01810 LysE type translocator GO994_03500 PF01177 Asp/Glu/Hydantoin racemase GO994_03510 PF04074 YhcH/YjgK/YiaL GO994_03515 PF00871 Acetokinase family GO994_03520 PF00924 Mechanosensitive ion channel GO994_03525 PF03734 L,D-transpeptidase catalytic domain GO994_03525 PF17969 L,D-transpeptidase C-terminal domain GO994_03530 PF00474 Sodium:solute symporter family GO994_03540 PF13411 MerR HTH family regulatory protein GO994_03545 PF13808 DDE_Tnp_1-associated GO994_03545 PF01609 Transposase DDE domain GO994_03560 PF01609 Transposase DDE domain GO994_03560 PF13808 DDE_Tnp_1-associated GO994_03620 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GO994_03630 PF12848 ABC transporter GO994_03630 PF00005 ABC transporter GO994_03635 PF00571 CBS domain GO994_03635 PF01380 SIS domain GO994_03640 PF01957 NfeD-like C-terminal, partner-binding GO994_03645 PF16200 C-terminal region of band_7 GO994_03645 PF01145 SPFH domain / Band 7 family GO994_03655 PF01507 Phosphoadenosine phosphosulfate reductase family GO994_03660 PF00009 Elongation factor Tu GTP binding domain GO994_03665 PF03600 Citrate transporter GO994_03665 PF02080 TrkA-C domain GO994_03690 PF00872 Transposase, Mutator family GO994_03695 PF13808 DDE_Tnp_1-associated GO994_03695 PF01609 Transposase DDE domain GO994_03730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_03730 PF08447 PAS fold GO994_03750 PF00005 ABC transporter GO994_03765 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GO994_03785 PF00480 ROK family GO994_03790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GO994_03790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GO994_03795 PF00162 Phosphoglycerate kinase GO994_03800 PF01116 Fructose-bisphosphate aldolase class-II GO994_03805 PF01266 FAD dependent oxidoreductase GO994_03815 PF11412 Disulphide bond corrector protein DsbC GO994_03815 PF02683 Cytochrome C biogenesis protein transmembrane region GO994_03820 PF03091 CutA1 divalent ion tolerance protein GO994_03840 PF01571 Aminomethyltransferase folate-binding domain GO994_03845 PF03937 Flavinator of succinate dehydrogenase GO994_03855 PF02910 Fumarate reductase flavoprotein C-term GO994_03855 PF00890 FAD binding domain GO994_03860 PF08281 Sigma-70, region 4 GO994_03860 PF04542 Sigma-70 region 2 GO994_03865 PF03873 Anti sigma-E protein RseA, C-terminal domain GO994_03865 PF03872 Anti sigma-E protein RseA, N-terminal domain GO994_03880 PF06421 GTP-binding protein LepA C-terminus GO994_03880 PF03144 Elongation factor Tu domain 2 GO994_03880 PF00009 Elongation factor Tu GTP binding domain GO994_03880 PF00679 Elongation factor G C-terminus GO994_03885 PF10502 Signal peptidase, peptidase S26 GO994_03890 PF00035 Double-stranded RNA binding motif GO994_03890 PF14622 Ribonuclease-III-like GO994_03895 PF07650 KH domain GO994_03895 PF01926 50S ribosome-binding GTPase GO994_03900 PF02565 Recombination protein O C terminal GO994_03900 PF11967 Recombination protein O N terminal GO994_03905 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GO994_03910 PF01510 N-acetylmuramoyl-L-alanine amidase GO994_03915 PF07308 Protein of unknown function (DUF1456) GO994_03920 PF00672 HAMP domain GO994_03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_03920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GO994_03920 PF01627 Hpt domain GO994_03920 PF00072 Response regulator receiver domain GO994_03920 PF00512 His Kinase A (phospho-acceptor) domain GO994_03925 PF01938 TRAM domain GO994_03925 PF05958 tRNA (Uracil-5-)-methyltransferase GO994_03930 PF02824 TGS domain GO994_03930 PF04607 Region found in RelA / SpoT proteins GO994_03930 PF13291 ACT domain GO994_03935 PF03819 MazG nucleotide pyrophosphohydrolase domain GO994_03940 PF00117 Glutamine amidotransferase class-I GO994_03940 PF06418 CTP synthase N-terminus GO994_03945 PF00113 Enolase, C-terminal TIM barrel domain GO994_03945 PF03952 Enolase, N-terminal domain GO994_03950 PF04977 Septum formation initiator GO994_03955 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO994_03960 PF02542 YgbB family GO994_03965 PF01142 tRNA pseudouridine synthase D (TruD) GO994_03970 PF01975 Survival protein SurE GO994_03980 PF09335 SNARE associated Golgi protein GO994_03985 PF01476 LysM domain GO994_03985 PF01551 Peptidase family M23 GO994_03990 PF04542 Sigma-70 region 2 GO994_03990 PF00140 Sigma-70 factor, region 1.2 GO994_03990 PF04545 Sigma-70, region 4 GO994_03990 PF04539 Sigma-70 region 3 GO994_03995 PF00814 Glycoprotease family GO994_04000 PF01165 Ribosomal protein S21 GO994_04005 PF09424 Yqey-like protein GO994_04010 PF10410 DnaB-helicase binding domain of primase GO994_04010 PF01807 CHC2 zinc finger GO994_04010 PF08275 DNA primase catalytic core, N-terminal domain GO994_04010 PF08278 DNA primase DnaG DnaB-binding GO994_04015 PF00140 Sigma-70 factor, region 1.2 GO994_04015 PF03979 Sigma-70 factor, region 1.1 GO994_04015 PF04542 Sigma-70 region 2 GO994_04015 PF04539 Sigma-70 region 3 GO994_04015 PF04546 Sigma-70, non-essential region GO994_04015 PF04545 Sigma-70, region 4 GO994_04025 PF13358 DDE superfamily endonuclease GO994_04025 PF13592 Winged helix-turn helix GO994_04055 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GO994_04055 PF02843 Phosphoribosylglycinamide synthetase, C domain GO994_04055 PF02844 Phosphoribosylglycinamide synthetase, N domain GO994_04060 PF02142 MGS-like domain GO994_04060 PF01808 AICARFT/IMPCHase bienzyme GO994_04065 PF13411 MerR HTH family regulatory protein GO994_04070 PF01872 RibD C-terminal domain GO994_04075 PF03889 Alternative ribosome-rescue factor A GO994_04080 PF06969 HemN C-terminal domain GO994_04080 PF04055 Radical SAM superfamily GO994_04085 PF01725 Ham1 family GO994_04095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GO994_04095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GO994_04110 PF13302 Acetyltransferase (GNAT) domain GO994_04115 PF13302 Acetyltransferase (GNAT) domain GO994_04120 PF07504 Fungalysin/Thermolysin Propeptide Motif GO994_04120 PF04151 Bacterial pre-peptidase C-terminal domain GO994_04120 PF02868 Thermolysin metallopeptidase, alpha-helical domain GO994_04120 PF01447 Thermolysin metallopeptidase, catalytic domain GO994_04120 PF03413 Peptidase propeptide and YPEB domain GO994_04125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_04125 PF03466 LysR substrate binding domain GO994_04130 PF07690 Major Facilitator Superfamily GO994_04135 PF00267 Gram-negative porin GO994_04140 PF03605 Anaerobic c4-dicarboxylate membrane transporter GO994_04145 PF10415 Fumarase C C-terminus GO994_04145 PF00206 Lyase GO994_04150 PF04186 FxsA cytoplasmic membrane protein GO994_04160 PF00166 Chaperonin 10 Kd subunit GO994_04165 PF00118 TCP-1/cpn60 chaperonin family GO994_04175 PF03707 Bacterial signalling protein N terminal repeat GO994_04175 PF00990 Diguanylate cyclase, GGDEF domain GO994_04175 PF13188 PAS domain GO994_04175 PF00563 EAL domain GO994_04185 PF00849 RNA pseudouridylate synthase GO994_04190 PF00176 SNF2 family N-terminal domain GO994_04190 PF12137 RNA polymerase recycling family C-terminal GO994_04190 PF18339 RapA N-terminal Tudor like domain 1 GO994_04190 PF18337 RapA N-terminal Tudor like domain GO994_04190 PF00271 Helicase conserved C-terminal domain GO994_04215 PF01810 LysE type translocator GO994_04220 PF02954 Bacterial regulatory protein, Fis family GO994_04225 PF01207 Dihydrouridine synthase (Dus) GO994_04230 PF02321 Outer membrane efflux protein GO994_04235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_04265 PF00072 Response regulator receiver domain GO994_04270 PF00854 POT family GO994_04275 PF00483 Nucleotidyl transferase GO994_04285 PF00459 Inositol monophosphatase family GO994_04290 PF03795 YCII-related domain GO994_04295 PF04279 Intracellular septation protein A GO994_04300 PF00282 Pyridoxal-dependent decarboxylase conserved domain GO994_04305 PF03006 Haemolysin-III related GO994_04310 PF02080 TrkA-C domain GO994_04310 PF06826 Predicted Permease Membrane Region GO994_04320 PF01584 CheW-like domain GO994_04320 PF00072 Response regulator receiver domain GO994_04325 PF13472 GDSL-like Lipase/Acylhydrolase family GO994_04330 PF00005 ABC transporter GO994_04340 PF08338 Domain of unknown function (DUF1731) GO994_04340 PF01370 NAD dependent epimerase/dehydratase family GO994_04345 PF12792 CSS motif domain associated with EAL GO994_04345 PF00563 EAL domain GO994_04350 PF00155 Aminotransferase class I and II GO994_04355 PF04389 Peptidase family M28 GO994_04355 PF01483 Proprotein convertase P-domain GO994_04360 PF02390 Putative methyltransferase GO994_04365 PF04320 Protein with unknown function (DUF469) GO994_04375 PF00581 Rhodanese-like domain GO994_04380 PF06004 Bacterial protein of unknown function (DUF903) GO994_04385 PF00664 ABC transporter transmembrane region GO994_04385 PF00005 ABC transporter GO994_04390 PF00561 alpha/beta hydrolase fold GO994_04395 PF00171 Aldehyde dehydrogenase family GO994_04400 PF05199 GMC oxidoreductase GO994_04400 PF00732 GMC oxidoreductase GO994_04425 PF05547 Immune inhibitor A peptidase M6 GO994_04425 PF00801 PKD domain GO994_04430 PF06877 Regulator of ribonuclease activity B GO994_04435 PF03707 Bacterial signalling protein N terminal repeat GO994_04435 PF00990 Diguanylate cyclase, GGDEF domain GO994_04435 PF00563 EAL domain GO994_04455 PF09905 DNA-binding protein VF530 GO994_04460 PF02666 Phosphatidylserine decarboxylase GO994_04465 PF03193 RsgA GTPase GO994_04470 PF00929 Exonuclease GO994_04500 PF00313 'Cold-shock' DNA-binding domain GO994_04515 PF00749 tRNA synthetases class I (E and Q), catalytic domain GO994_04555 PF06483 Chitinase C GO994_04555 PF00704 Glycosyl hydrolases family 18 GO994_04570 PF02472 Biopolymer transport protein ExbD/TolR GO994_04575 PF01618 MotA/TolQ/ExbB proton channel family GO994_04580 PF01618 MotA/TolQ/ExbB proton channel family GO994_04590 PF07715 TonB-dependent Receptor Plug Domain GO994_04590 PF00593 TonB dependent receptor GO994_04610 PF00528 Binding-protein-dependent transport system inner membrane component GO994_04610 PF12911 N-terminal TM domain of oligopeptide transport permease C GO994_04615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_04620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO994_04620 PF00005 ABC transporter GO994_04625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO994_04625 PF00005 ABC transporter GO994_04635 PF07687 Peptidase dimerisation domain GO994_04635 PF01546 Peptidase family M20/M25/M40 GO994_04650 PF00156 Phosphoribosyl transferase domain GO994_04660 PF07417 Sigma factor-binding transcriptional regulator Crl GO994_04665 PF00696 Amino acid kinase family GO994_04665 PF01472 PUA domain GO994_04670 PF00171 Aldehyde dehydrogenase family GO994_04680 PF00582 Universal stress protein family GO994_04700 PF00294 pfkB family carbohydrate kinase GO994_04720 PF00034 Cytochrome c GO994_04720 PF03150 Di-haem cytochrome c peroxidase GO994_04760 PF00550 Phosphopantetheine attachment site GO994_04765 PF00550 Phosphopantetheine attachment site GO994_04775 PF00501 AMP-binding enzyme GO994_04775 PF13193 AMP-binding enzyme C-terminal domain GO994_04780 PF07977 FabA-like domain GO994_04790 PF00221 Aromatic amino acid lyase GO994_04815 PF02801 Beta-ketoacyl synthase, C-terminal domain GO994_04815 PF00109 Beta-ketoacyl synthase, N-terminal domain GO994_04830 PF02801 Beta-ketoacyl synthase, C-terminal domain GO994_04830 PF00109 Beta-ketoacyl synthase, N-terminal domain GO994_04840 PF00994 Probable molybdopterin binding domain GO994_04845 PF13358 DDE superfamily endonuclease GO994_04845 PF13592 Winged helix-turn helix GO994_04860 PF13808 DDE_Tnp_1-associated GO994_04860 PF01609 Transposase DDE domain GO994_04870 PF06738 Putative threonine/serine exporter GO994_04875 PF12821 Threonine/Serine exporter, ThrE GO994_04880 PF00186 Dihydrofolate reductase GO994_04885 PF00005 ABC transporter GO994_04885 PF00571 CBS domain GO994_04890 PF00528 Binding-protein-dependent transport system inner membrane component GO994_04895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GO994_04900 PF01507 Phosphoadenosine phosphosulfate reductase family GO994_04905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GO994_04905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GO994_04910 PF00667 FAD binding domain GO994_04910 PF00175 Oxidoreductase NAD-binding domain GO994_04910 PF00258 Flavodoxin GO994_04915 PF02567 Phenazine biosynthesis-like protein GO994_04920 PF00152 tRNA synthetases class II (D, K and N) GO994_04920 PF01336 OB-fold nucleic acid binding domain GO994_04930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_04930 PF00672 HAMP domain GO994_04930 PF02743 Cache domain GO994_04935 PF03616 Sodium/glutamate symporter GO994_04940 PF00710 Asparaginase, N-terminal GO994_04940 PF17763 Glutaminase/Asparaginase C-terminal domain GO994_04945 PF07023 Protein of unknown function (DUF1315) GO994_04950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GO994_04950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GO994_04965 PF01343 Peptidase family S49 GO994_04970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GO994_04970 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_04975 PF00881 Nitroreductase family GO994_04985 PF12464 Maltose acetyltransferase GO994_04985 PF14602 Hexapeptide repeat of succinyl-transferase GO994_04990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO994_04990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO994_04990 PF01842 ACT domain GO994_04995 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GO994_05000 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GO994_05005 PF13520 Amino acid permease GO994_05015 PF00107 Zinc-binding dehydrogenase GO994_05015 PF08240 Alcohol dehydrogenase GroES-like domain GO994_05025 PF03466 LysR substrate binding domain GO994_05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_05030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GO994_05030 PF00367 phosphotransferase system, EIIB GO994_05030 PF02378 Phosphotransferase system, EIIC GO994_05035 PF00474 Sodium:solute symporter family GO994_05040 PF06196 Protein of unknown function (DUF997) GO994_05045 PF00289 Biotin carboxylase, N-terminal domain GO994_05045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GO994_05045 PF02785 Biotin carboxylase C-terminal domain GO994_05050 PF00364 Biotin-requiring enzyme GO994_05055 PF01220 Dehydroquinase class II GO994_05060 PF16177 Acetyl-coenzyme A synthetase N-terminus GO994_05060 PF00501 AMP-binding enzyme GO994_05060 PF13193 AMP-binding enzyme C-terminal domain GO994_05070 PF00563 EAL domain GO994_05070 PF00990 Diguanylate cyclase, GGDEF domain GO994_05070 PF03707 Bacterial signalling protein N terminal repeat GO994_05090 PF02613 Nitrate reductase delta subunit GO994_05100 PF00464 Serine hydroxymethyltransferase GO994_05115 PF03477 ATP cone domain GO994_05120 PF01872 RibD C-terminal domain GO994_05120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GO994_05125 PF00677 Lumazine binding domain GO994_05130 PF00925 GTP cyclohydrolase II GO994_05130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GO994_05135 PF00885 6,7-dimethyl-8-ribityllumazine synthase GO994_05140 PF01029 NusB family GO994_05145 PF02769 AIR synthase related protein, C-terminal domain GO994_05145 PF00586 AIR synthase related protein, N-terminal domain GO994_05150 PF04608 Phosphatidylglycerophosphatase A GO994_05155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO994_05155 PF00005 ABC transporter GO994_05160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_05170 PF12911 N-terminal TM domain of oligopeptide transport permease C GO994_05170 PF00528 Binding-protein-dependent transport system inner membrane component GO994_05175 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GO994_05175 PF02779 Transketolase, pyrimidine binding domain GO994_05175 PF02780 Transketolase, C-terminal domain GO994_05180 PF00348 Polyprenyl synthetase GO994_05185 PF02609 Exonuclease VII small subunit GO994_05190 PF01618 MotA/TolQ/ExbB proton channel family GO994_05195 PF00691 OmpA family GO994_05195 PF13677 Membrane MotB of proton-channel complex MotA/MotB GO994_05205 PF03449 Transcription elongation factor, N-terminal GO994_05205 PF01272 Transcription elongation factor, GreA/GreB, C-term GO994_05215 PF01985 CRS1 / YhbY (CRM) domain GO994_05220 PF01728 FtsJ-like methyltransferase GO994_05225 PF01434 Peptidase family M41 GO994_05225 PF06480 FtsH Extracellular GO994_05225 PF17862 AAA+ lid domain GO994_05225 PF00004 ATPase family associated with various cellular activities (AAA) GO994_05230 PF00809 Pterin binding enzyme GO994_05235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GO994_05235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GO994_05235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GO994_05235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GO994_05240 PF00121 Triosephosphate isomerase GO994_05245 PF03840 Preprotein translocase SecG subunit GO994_05260 PF02576 RimP N-terminal domain GO994_05260 PF17384 RimP C-terminal SH3 domain GO994_05265 PF00575 S1 RNA binding domain GO994_05265 PF13184 NusA-like KH domain GO994_05265 PF08529 NusA N-terminal domain GO994_05270 PF04760 Translation initiation factor IF-2, N-terminal region GO994_05270 PF08364 Bacterial translation initiation factor IF-2 associated region GO994_05270 PF11987 Translation-initiation factor 2 GO994_05270 PF00009 Elongation factor Tu GTP binding domain GO994_05275 PF02033 Ribosome-binding factor A GO994_05280 PF16198 tRNA pseudouridylate synthase B C-terminal domain GO994_05280 PF01509 TruB family pseudouridylate synthase (N terminal domain) GO994_05280 PF09157 Pseudouridine synthase II TruB, C-terminal GO994_05285 PF00312 Ribosomal protein S15 GO994_05290 PF00575 S1 RNA binding domain GO994_05290 PF00013 KH domain GO994_05290 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GO994_05290 PF01138 3' exoribonuclease family, domain 1 GO994_05290 PF03725 3' exoribonuclease family, domain 2 GO994_05295 PF07690 Major Facilitator Superfamily GO994_05300 PF00990 Diguanylate cyclase, GGDEF domain GO994_05305 PF02635 DsrE/DsrF-like family GO994_05310 PF06476 Protein of unknown function (DUF1090) GO994_05325 PF03575 Peptidase family S51 GO994_05365 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GO994_05375 PF03734 L,D-transpeptidase catalytic domain GO994_05375 PF17969 L,D-transpeptidase C-terminal domain GO994_05385 PF01523 Putative modulator of DNA gyrase GO994_05390 PF01523 Putative modulator of DNA gyrase GO994_05395 PF00258 Flavodoxin GO994_05400 PF00589 Phage integrase family GO994_05400 PF02899 Phage integrase, N-terminal SAM-like domain GO994_05420 PF01741 Large-conductance mechanosensitive channel, MscL GO994_05425 PF13808 DDE_Tnp_1-associated GO994_05425 PF01609 Transposase DDE domain GO994_05435 PF02272 DHHA1 domain GO994_05435 PF01368 DHH family GO994_05435 PF17768 RecJ OB domain GO994_05445 PF02508 Rnf-Nqr subunit, membrane protein GO994_05450 PF06821 Serine hydrolase GO994_05455 PF13302 Acetyltransferase (GNAT) domain GO994_05530 PF01609 Transposase DDE domain GO994_05530 PF13808 DDE_Tnp_1-associated GO994_05555 PF04055 Radical SAM superfamily GO994_05555 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GO994_05560 PF03099 Biotin/lipoate A/B protein ligase family GO994_05565 PF04359 Protein of unknown function (DUF493) GO994_05570 PF07943 Penicillin-binding protein 5, C-terminal domain GO994_05570 PF00768 D-alanyl-D-alanine carboxypeptidase GO994_05575 PF05036 Sporulation related domain GO994_05575 PF03330 Lytic transglycolase GO994_05580 PF13406 Transglycosylase SLT domain GO994_05585 PF01098 Cell cycle protein GO994_05590 PF03717 Penicillin-binding Protein dimerisation domain GO994_05590 PF00905 Penicillin binding protein transpeptidase domain GO994_05595 PF02590 Predicted SPOUT methyltransferase GO994_05605 PF01467 Cytidylyltransferase-like GO994_05625 PF00133 tRNA synthetases class I (I, L, M and V) GO994_05625 PF13603 Leucyl-tRNA synthetase, Domain 2 GO994_05625 PF08264 Anticodon-binding domain of tRNA GO994_05630 PF07295 Zinc-ribbon containing domain GO994_05635 PF00795 Carbon-nitrogen hydrolase GO994_05640 PF03471 Transporter associated domain GO994_05640 PF00571 CBS domain GO994_05645 PF02130 Uncharacterized protein family UPF0054 GO994_05650 PF02562 PhoH-like protein GO994_05655 PF00919 Uncharacterized protein family UPF0004 GO994_05655 PF04055 Radical SAM superfamily GO994_05655 PF01938 TRAM domain GO994_05660 PF01494 FAD binding domain GO994_05665 PF00313 'Cold-shock' DNA-binding domain GO994_05670 PF00990 Diguanylate cyclase, GGDEF domain GO994_05670 PF05230 MASE2 domain GO994_05675 PF03466 LysR substrate binding domain GO994_05675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_05685 PF13419 Haloacid dehalogenase-like hydrolase GO994_05705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO994_05705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO994_05715 PF09285 Elongation factor P, C-terminal GO994_05715 PF08207 Elongation factor P (EF-P) KOW-like domain GO994_05715 PF01132 Elongation factor P (EF-P) OB domain GO994_05725 PF00478 IMP dehydrogenase / GMP reductase domain GO994_05740 PF00072 Response regulator receiver domain GO994_05740 PF00486 Transcriptional regulatory protein, C terminal GO994_05760 PF00501 AMP-binding enzyme GO994_05775 PF06224 Winged helix DNA-binding domain GO994_05795 PF02313 Fumarate reductase subunit D GO994_05800 PF02300 Fumarate reductase subunit C GO994_05805 PF13085 2Fe-2S iron-sulfur cluster binding domain GO994_05805 PF13183 4Fe-4S dicluster domain GO994_05810 PF02910 Fumarate reductase flavoprotein C-term GO994_05810 PF00890 FAD binding domain GO994_05820 PF03009 Glycerophosphoryl diester phosphodiesterase family GO994_05825 PF00924 Mechanosensitive ion channel GO994_05825 PF12794 Mechanosensitive ion channel inner membrane domain 1 GO994_05825 PF12795 Mechanosensitive ion channel porin domain GO994_05830 PF13592 Winged helix-turn helix GO994_05830 PF13358 DDE superfamily endonuclease GO994_05840 PF01551 Peptidase family M23 GO994_05840 PF01476 LysM domain GO994_05840 PF08525 Opacity-associated protein A N-terminal motif GO994_05855 PF03466 LysR substrate binding domain GO994_05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_05870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_05870 PF17200 Single Cache domain 2 GO994_05870 PF00672 HAMP domain GO994_05875 PF03466 LysR substrate binding domain GO994_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_05880 PF17092 Penicillin-binding protein OB-like domain GO994_05880 PF00912 Transglycosylase GO994_05880 PF00905 Penicillin binding protein transpeptidase domain GO994_05910 PF01202 Shikimate kinase GO994_05915 PF01761 3-dehydroquinate synthase GO994_05925 PF02086 D12 class N6 adenine-specific DNA methyltransferase GO994_05930 PF00834 Ribulose-phosphate 3 epimerase family GO994_05935 PF13419 Haloacid dehalogenase-like hydrolase GO994_05940 PF00579 tRNA synthetases class I (W and Y) GO994_05950 PF00117 Glutamine amidotransferase class-I GO994_05955 PF00202 Aminotransferase class-III GO994_05960 PF04958 Arginine N-succinyltransferase beta subunit GO994_05965 PF00171 Aldehyde dehydrogenase family GO994_05975 PF13419 Haloacid dehalogenase-like hydrolase GO994_05980 PF07690 Major Facilitator Superfamily GO994_06005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GO994_06005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GO994_06005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GO994_06010 PF06794 Uncharacterised protein family (UPF0270) GO994_06035 PF00561 alpha/beta hydrolase fold GO994_06040 PF01584 CheW-like domain GO994_06040 PF00072 Response regulator receiver domain GO994_06050 PF09526 Probable metal-binding protein (DUF2387) GO994_06055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO994_06060 PF04102 SlyX GO994_06070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO994_06070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GO994_06075 PF00072 Response regulator receiver domain GO994_06075 PF02954 Bacterial regulatory protein, Fis family GO994_06075 PF00158 Sigma-54 interaction domain GO994_06095 PF00149 Calcineurin-like phosphoesterase GO994_06095 PF02872 5'-nucleotidase, C-terminal domain GO994_06100 PF12792 CSS motif domain associated with EAL GO994_06100 PF00563 EAL domain GO994_06115 PF00772 DnaB-like helicase N terminal domain GO994_06115 PF03796 DnaB-like helicase C terminal domain GO994_06120 PF00772 DnaB-like helicase N terminal domain GO994_06120 PF03796 DnaB-like helicase C terminal domain GO994_06125 PF01168 Alanine racemase, N-terminal domain GO994_06125 PF00842 Alanine racemase, C-terminal domain GO994_06130 PF12838 4Fe-4S dicluster domain GO994_06140 PF00990 Diguanylate cyclase, GGDEF domain GO994_06140 PF00563 EAL domain GO994_06140 PF00989 PAS fold GO994_06140 PF01590 GAF domain GO994_06145 PF13808 DDE_Tnp_1-associated GO994_06145 PF01609 Transposase DDE domain GO994_06165 PF13808 DDE_Tnp_1-associated GO994_06165 PF01609 Transposase DDE domain GO994_06195 PF00106 short chain dehydrogenase GO994_06220 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GO994_06230 PF00730 HhH-GPD superfamily base excision DNA repair protein GO994_06230 PF02805 Metal binding domain of Ada GO994_06230 PF12833 Helix-turn-helix domain GO994_06230 PF06029 AlkA N-terminal domain GO994_06235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GO994_06235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GO994_06240 PF01209 ubiE/COQ5 methyltransferase family GO994_06245 PF06906 Protein of unknown function (DUF1272) GO994_06260 PF01810 LysE type translocator GO994_06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_06265 PF03466 LysR substrate binding domain GO994_06270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO994_06270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GO994_06275 PF02743 Cache domain GO994_06275 PF00672 HAMP domain GO994_06275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_06290 PF01627 Hpt domain GO994_06290 PF01584 CheW-like domain GO994_06290 PF02895 Signal transducing histidine kinase, homodimeric domain GO994_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_06300 PF01584 CheW-like domain GO994_06305 PF00672 HAMP domain GO994_06305 PF02203 Tar ligand binding domain homologue GO994_06305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_06325 PF03975 CheD chemotactic sensory transduction GO994_06330 PF01339 CheB methylesterase GO994_06330 PF00072 Response regulator receiver domain GO994_06335 PF00266 Aminotransferase class-V GO994_06360 PF00672 HAMP domain GO994_06360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_06360 PF01627 Hpt domain GO994_06360 PF00072 Response regulator receiver domain GO994_06360 PF00512 His Kinase A (phospho-acceptor) domain GO994_06360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GO994_06370 PF03573 outer membrane porin, OprD family GO994_06385 PF07995 Glucose / Sorbosone dehydrogenase GO994_06410 PF00800 Prephenate dehydratase GO994_06410 PF01817 Chorismate mutase type II GO994_06440 PF08349 Protein of unknown function (DUF1722) GO994_06445 PF13411 MerR HTH family regulatory protein GO994_06450 PF00875 DNA photolyase GO994_06450 PF03441 FAD binding domain of DNA photolyase GO994_06460 PF00106 short chain dehydrogenase GO994_06500 PF00210 Ferritin-like domain GO994_06505 PF03063 Prismane/CO dehydrogenase family GO994_06510 PF00970 Oxidoreductase FAD-binding domain GO994_06510 PF00111 2Fe-2S iron-sulfur cluster binding domain GO994_06510 PF00175 Oxidoreductase NAD-binding domain GO994_06515 PF16363 GDP-mannose 4,6 dehydratase GO994_06520 PF13462 Thioredoxin GO994_06520 PF06965 Na+/H+ antiporter 1 GO994_06535 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GO994_06535 PF10091 Putative glucoamylase GO994_06535 PF06165 Glycosyltransferase family 36 GO994_06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_06540 PF03466 LysR substrate binding domain GO994_06545 PF03306 Alpha-acetolactate decarboxylase GO994_06550 PF00205 Thiamine pyrophosphate enzyme, central domain GO994_06550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO994_06550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO994_06555 PF01965 DJ-1/PfpI family GO994_06560 PF02558 Ketopantoate reductase PanE/ApbA GO994_06560 PF08546 Ketopantoate reductase PanE/ApbA C terminal GO994_06565 PF04461 Protein of unknown function (DUF520) GO994_06570 PF03502 Nucleoside-specific channel-forming protein, Tsx GO994_06575 PF07690 Major Facilitator Superfamily GO994_06585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GO994_06595 PF05175 Methyltransferase small domain GO994_06600 PF01722 BolA-like protein GO994_06610 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GO994_06610 PF11973 NQRA C-terminal domain GO994_06615 PF03116 NQR2, RnfD, RnfE family GO994_06620 PF04205 FMN-binding domain GO994_06625 PF02508 Rnf-Nqr subunit, membrane protein GO994_06630 PF02508 Rnf-Nqr subunit, membrane protein GO994_06635 PF00111 2Fe-2S iron-sulfur cluster binding domain GO994_06635 PF00970 Oxidoreductase FAD-binding domain GO994_06635 PF00175 Oxidoreductase NAD-binding domain GO994_06640 PF02424 ApbE family GO994_06655 PF00817 impB/mucB/samB family GO994_06655 PF11799 impB/mucB/samB family C-terminal domain GO994_06655 PF11798 IMS family HHH motif GO994_06660 PF00672 HAMP domain GO994_06660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_06665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_06665 PF03466 LysR substrate binding domain GO994_06675 PF04241 Protein of unknown function (DUF423) GO994_06680 PF18125 RlmM ferredoxin-like domain GO994_06680 PF01728 FtsJ-like methyltransferase GO994_06690 PF00180 Isocitrate/isopropylmalate dehydrogenase GO994_06690 PF18324 Hypothetical protein TT1725 GO994_06695 PF01367 5'-3' exonuclease, C-terminal SAM fold GO994_06695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GO994_06700 PF11892 Domain of unknown function (DUF3412) GO994_06700 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GO994_06700 PF03641 Possible lysine decarboxylase GO994_06705 PF07694 5TMR of 5TMR-LYT GO994_06705 PF00990 Diguanylate cyclase, GGDEF domain GO994_06715 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GO994_06715 PF14489 QueF-like protein GO994_06720 PF07348 Syd protein (SUKH-2) GO994_06725 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GO994_06750 PF04287 tRNA pseudouridine synthase C GO994_06755 PF00849 RNA pseudouridylate synthase GO994_06760 PF00258 Flavodoxin GO994_06765 PF02264 LamB porin GO994_06770 PF07148 Maltose operon periplasmic protein precursor (MalM) GO994_06775 PF02378 Phosphotransferase system, EIIC GO994_06775 PF00367 phosphotransferase system, EIIB GO994_06780 PF11944 Protein of unknown function (DUF3461) GO994_06785 PF14602 Hexapeptide repeat of succinyl-transferase GO994_06785 PF00132 Bacterial transferase hexapeptide (six repeats) GO994_06785 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GO994_06790 PF08335 GlnD PII-uridylyltransferase GO994_06790 PF01966 HD domain GO994_06790 PF01842 ACT domain GO994_06790 PF01909 Nucleotidyltransferase domain GO994_06795 PF00557 Metallopeptidase family M24 GO994_06800 PF00318 Ribosomal protein S2 GO994_06805 PF00889 Elongation factor TS GO994_06810 PF00696 Amino acid kinase family GO994_06815 PF01765 Ribosome recycling factor GO994_06820 PF01255 Putative undecaprenyl diphosphate synthase GO994_06830 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO994_06830 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GO994_06830 PF13288 DXP reductoisomerase C-terminal domain GO994_06835 PF02163 Peptidase family M50 GO994_06835 PF17820 PDZ domain GO994_06840 PF01103 Surface antigen GO994_06840 PF07244 Surface antigen variable number repeat GO994_06845 PF03938 Outer membrane protein (OmpH-like) GO994_06850 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GO994_06850 PF00132 Bacterial transferase hexapeptide (six repeats) GO994_06855 PF07977 FabA-like domain GO994_06860 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GO994_06860 PF00132 Bacterial transferase hexapeptide (six repeats) GO994_06865 PF02684 Lipid-A-disaccharide synthetase GO994_06870 PF01351 Ribonuclease HII GO994_06875 PF01336 OB-fold nucleic acid binding domain GO994_06875 PF07733 Bacterial DNA polymerase III alpha NTPase domain GO994_06875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GO994_06875 PF02811 PHP domain GO994_06875 PF14579 Helix-hairpin-helix motif GO994_06880 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GO994_06885 PF00486 Transcriptional regulatory protein, C terminal GO994_06885 PF18500 CadC C-terminal domain 1 GO994_06890 PF13520 Amino acid permease GO994_06895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GO994_06895 PF01276 Orn/Lys/Arg decarboxylase, major domain GO994_06895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GO994_06900 PF08543 Phosphomethylpyrimidine kinase GO994_06910 PF03466 LysR substrate binding domain GO994_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_06920 PF13520 Amino acid permease GO994_06925 PF13302 Acetyltransferase (GNAT) domain GO994_06930 PF16326 ABC transporter C-terminal domain GO994_06930 PF00005 ABC transporter GO994_06930 PF12848 ABC transporter GO994_06940 PF05649 Peptidase family M13 GO994_06940 PF01431 Peptidase family M13 GO994_06945 PF01171 PP-loop family GO994_06945 PF11734 TilS substrate C-terminal domain GO994_06945 PF09179 TilS substrate binding domain GO994_06950 PF00990 Diguanylate cyclase, GGDEF domain GO994_06955 PF00999 Sodium/hydrogen exchanger family GO994_06955 PF02080 TrkA-C domain GO994_06955 PF02254 TrkA-N domain GO994_06995 PF00072 Response regulator receiver domain GO994_06995 PF00196 Bacterial regulatory proteins, luxR family GO994_07005 PF00128 Alpha amylase, catalytic domain GO994_07025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_07025 PF03466 LysR substrate binding domain GO994_07035 PF00155 Aminotransferase class I and II GO994_07040 PF07690 Major Facilitator Superfamily GO994_07045 PF03466 LysR substrate binding domain GO994_07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_07050 PF00106 short chain dehydrogenase GO994_07055 PF08496 Peptidase family S49 N-terminal GO994_07055 PF01343 Peptidase family S49 GO994_07060 PF04996 Succinylarginine dihydrolase GO994_07065 PF08272 Topoisomerase I zinc-ribbon-like GO994_07065 PF01131 DNA topoisomerase GO994_07065 PF01751 Toprim domain GO994_07065 PF01396 Topoisomerase DNA binding C4 zinc finger GO994_07075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_07075 PF08447 PAS fold GO994_07080 PF00728 Glycosyl hydrolase family 20, catalytic domain GO994_07080 PF02838 Glycosyl hydrolase family 20, domain 2 GO994_07085 PF01869 BadF/BadG/BcrA/BcrD ATPase family GO994_07095 PF00005 ABC transporter GO994_07095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO994_07100 PF00005 ABC transporter GO994_07100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO994_07105 PF12911 N-terminal TM domain of oligopeptide transport permease C GO994_07105 PF00528 Binding-protein-dependent transport system inner membrane component GO994_07110 PF00528 Binding-protein-dependent transport system inner membrane component GO994_07115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_07140 PF10725 Protein of unknown function (DUF2517) GO994_07150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_07150 PF13426 PAS domain GO994_07150 PF08447 PAS fold GO994_07160 PF04632 Fusaric acid resistance protein family GO994_07165 PF03454 MoeA C-terminal region (domain IV) GO994_07165 PF00994 Probable molybdopterin binding domain GO994_07165 PF03453 MoeA N-terminal region (domain I and II) GO994_07170 PF12804 MobA-like NTP transferase domain GO994_07175 PF00005 ABC transporter GO994_07180 PF00528 Binding-protein-dependent transport system inner membrane component GO994_07185 PF12849 PBP superfamily domain GO994_07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_07195 PF00512 His Kinase A (phospho-acceptor) domain GO994_07195 PF00989 PAS fold GO994_07205 PF02634 FdhD/NarQ family GO994_07210 PF00872 Transposase, Mutator family GO994_07260 PF13356 Arm DNA-binding domain GO994_07260 PF00589 Phage integrase family GO994_07270 PF01668 SmpB protein GO994_07280 PF03364 Polyketide cyclase / dehydrase and lipid transport GO994_07290 PF13460 NAD(P)H-binding GO994_07295 PF04355 SmpA / OmlA family GO994_07325 PF13629 Pilus formation protein N terminal region GO994_07325 PF00263 Bacterial type II and III secretion system protein GO994_07325 PF04972 BON domain GO994_07335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GO994_07340 PF00437 Type II/IV secretion system protein GO994_07375 PF00465 Iron-containing alcohol dehydrogenase GO994_07380 PF01048 Phosphorylase superfamily GO994_07385 PF00849 RNA pseudouridylate synthase GO994_07390 PF01156 Inosine-uridine preferring nucleoside hydrolase GO994_07405 PF07509 Protein of unknown function (DUF1523) GO994_07410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_07410 PF12729 Four helix bundle sensory module for signal transduction GO994_07410 PF00672 HAMP domain GO994_07415 PF01810 LysE type translocator GO994_07440 PF02080 TrkA-C domain GO994_07440 PF03471 Transporter associated domain GO994_07440 PF00999 Sodium/hydrogen exchanger family GO994_07450 PF03471 Transporter associated domain GO994_07450 PF02080 TrkA-C domain GO994_07450 PF00999 Sodium/hydrogen exchanger family GO994_07460 PF02557 D-alanyl-D-alanine carboxypeptidase GO994_07465 PF01546 Peptidase family M20/M25/M40 GO994_07465 PF07687 Peptidase dimerisation domain GO994_07470 PF03960 ArsC family GO994_07475 PF03466 LysR substrate binding domain GO994_07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_07490 PF03605 Anaerobic c4-dicarboxylate membrane transporter GO994_07495 PF01336 OB-fold nucleic acid binding domain GO994_07495 PF00152 tRNA synthetases class II (D, K and N) GO994_07510 PF00202 Aminotransferase class-III GO994_07515 PF06968 Biotin and Thiamin Synthesis associated domain GO994_07515 PF04055 Radical SAM superfamily GO994_07520 PF00155 Aminotransferase class I and II GO994_07525 PF08241 Methyltransferase domain GO994_07525 PF12697 Alpha/beta hydrolase family GO994_07535 PF01435 Peptidase family M48 GO994_07540 PF13426 PAS domain GO994_07540 PF08447 PAS fold GO994_07540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_07545 PF00111 2Fe-2S iron-sulfur cluster binding domain GO994_07545 PF03473 MOSC domain GO994_07545 PF03473 MOSC domain GO994_07545 PF03476 MOSC N-terminal beta barrel domain GO994_07545 PF00111 2Fe-2S iron-sulfur cluster binding domain GO994_07545 PF03476 MOSC N-terminal beta barrel domain GO994_07550 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_07550 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GO994_07550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GO994_07575 PF04325 Protein of unknown function (DUF465) GO994_07585 PF01554 MatE GO994_07590 PF00916 Sulfate permease family GO994_07590 PF01740 STAS domain GO994_07605 PF00291 Pyridoxal-phosphate dependent enzyme GO994_07615 PF00465 Iron-containing alcohol dehydrogenase GO994_07625 PF17932 Tetracyclin repressor-like, C-terminal domain GO994_07625 PF00440 Bacterial regulatory proteins, tetR family GO994_07630 PF00171 Aldehyde dehydrogenase family GO994_07640 PF00877 NlpC/P60 family GO994_07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_07655 PF03466 LysR substrate binding domain GO994_07660 PF13358 DDE superfamily endonuclease GO994_07660 PF13592 Winged helix-turn helix GO994_07665 PF01627 Hpt domain GO994_07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_07665 PF02895 Signal transducing histidine kinase, homodimeric domain GO994_07665 PF01584 CheW-like domain GO994_07665 PF07194 P2 response regulator binding domain GO994_07670 PF01339 CheB methylesterase GO994_07670 PF00072 Response regulator receiver domain GO994_07675 PF01618 MotA/TolQ/ExbB proton channel family GO994_07680 PF00691 OmpA family GO994_07680 PF13677 Membrane MotB of proton-channel complex MotA/MotB GO994_07685 PF13614 AAA domain GO994_07695 PF01584 CheW-like domain GO994_07710 PF00005 ABC transporter GO994_07715 PF03379 CcmB protein GO994_07720 PF01578 Cytochrome C assembly protein GO994_07725 PF04995 Heme exporter protein D (CcmD) GO994_07730 PF03100 CcmE GO994_07735 PF01578 Cytochrome C assembly protein GO994_07735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GO994_07740 PF08534 Redoxin GO994_07745 PF03918 Cytochrome C biogenesis protein GO994_07755 PF04333 MlaA lipoprotein GO994_07760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GO994_07760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GO994_07765 PF00462 Glutaredoxin GO994_07770 PF01029 NusB family GO994_07770 PF01189 16S rRNA methyltransferase RsmB/F GO994_07785 PF01243 Pyridoxamine 5'-phosphate oxidase GO994_07785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GO994_07790 PF13417 Glutathione S-transferase, N-terminal domain GO994_07800 PF13508 Acetyltransferase (GNAT) domain GO994_07825 PF08007 Cupin superfamily protein GO994_07830 PF08328 Adenylosuccinate lyase C-terminal GO994_07830 PF00206 Lyase GO994_07835 PF04356 Protein of unknown function (DUF489) GO994_07845 PF00293 NUDIX domain GO994_07850 PF00849 RNA pseudouridylate synthase GO994_07860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GO994_07865 PF07690 Major Facilitator Superfamily GO994_07935 PF01169 Uncharacterized protein family UPF0016 GO994_07940 PF01253 Translation initiation factor SUI1 GO994_07950 PF07664 Ferrous iron transport protein B C terminus GO994_07950 PF02421 Ferrous iron transport protein B GO994_07950 PF07670 Nucleoside recognition GO994_07975 PF00483 Nucleotidyl transferase GO994_07980 PF00437 Type II/IV secretion system protein GO994_07990 PF01627 Hpt domain GO994_07990 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_07990 PF00512 His Kinase A (phospho-acceptor) domain GO994_07990 PF00989 PAS fold GO994_07990 PF00072 Response regulator receiver domain GO994_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_07995 PF01032 FecCD transport family GO994_08000 PF00005 ABC transporter GO994_08005 PF00793 DAHP synthetase I family GO994_08010 PF01219 Prokaryotic diacylglycerol kinase GO994_08015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO994_08015 PF01842 ACT domain GO994_08015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO994_08020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GO994_08025 PF01812 5-formyltetrahydrofolate cyclo-ligase family GO994_08040 PF05173 Dihydrodipicolinate reductase, C-terminus GO994_08040 PF01113 Dihydrodipicolinate reductase, N-terminus GO994_08045 PF00117 Glutamine amidotransferase class-I GO994_08045 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GO994_08050 PF02142 MGS-like domain GO994_08050 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GO994_08050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GO994_08055 PF08502 LeuA allosteric (dimerisation) domain GO994_08055 PF00682 HMGL-like GO994_08080 PF08378 Nuclease-related domain GO994_08095 PF13302 Acetyltransferase (GNAT) domain GO994_08100 PF00270 DEAD/DEAH box helicase GO994_08100 PF00271 Helicase conserved C-terminal domain GO994_08130 PF00376 MerR family regulatory protein GO994_08130 PF09278 MerR, DNA binding GO994_08145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GO994_08145 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_08150 PF01493 GXGXG motif GO994_08150 PF01645 Conserved region in glutamate synthase GO994_08150 PF00310 Glutamine amidotransferases class-II GO994_08150 PF04898 Glutamate synthase central domain GO994_08155 PF04055 Radical SAM superfamily GO994_08155 PF16199 Radical_SAM C-terminal domain GO994_08160 PF00005 ABC transporter GO994_08160 PF03412 Peptidase C39 family GO994_08160 PF00664 ABC transporter transmembrane region GO994_08200 PF13808 DDE_Tnp_1-associated GO994_08200 PF01609 Transposase DDE domain GO994_08235 PF12241 Trans-2-enoyl-CoA reductase catalytic region GO994_08235 PF07055 Enoyl reductase FAD binding domain GO994_08235 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GO994_08240 PF03606 C4-dicarboxylate anaerobic carrier GO994_08255 PF00462 Glutaredoxin GO994_08260 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GO994_08270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_08270 PF00529 HlyD membrane-fusion protein of T1SS GO994_08275 PF11742 Protein of unknown function (DUF3302) GO994_08280 PF02554 Carbon starvation protein CstA GO994_08285 PF00072 Response regulator receiver domain GO994_08285 PF04397 LytTr DNA-binding domain GO994_08310 PF00171 Aldehyde dehydrogenase family GO994_08310 PF00465 Iron-containing alcohol dehydrogenase GO994_08320 PF01914 MarC family integral membrane protein GO994_08325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_08330 PF00528 Binding-protein-dependent transport system inner membrane component GO994_08335 PF12911 N-terminal TM domain of oligopeptide transport permease C GO994_08335 PF00528 Binding-protein-dependent transport system inner membrane component GO994_08340 PF00005 ABC transporter GO994_08340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO994_08350 PF00005 ABC transporter GO994_08350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO994_08355 PF03741 Integral membrane protein TerC family GO994_08375 PF00842 Alanine racemase, C-terminal domain GO994_08375 PF01168 Alanine racemase, N-terminal domain GO994_08385 PF00375 Sodium:dicarboxylate symporter family GO994_08400 PF01979 Amidohydrolase family GO994_08410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_08410 PF00672 HAMP domain GO994_08415 PF01230 HIT domain GO994_08450 PF13721 SecD export protein N-terminal TM region GO994_08450 PF07549 SecD/SecF GG Motif GO994_08450 PF02355 Protein export membrane protein GO994_08455 PF02355 Protein export membrane protein GO994_08455 PF07549 SecD/SecF GG Motif GO994_08490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GO994_08495 PF13677 Membrane MotB of proton-channel complex MotA/MotB GO994_08495 PF00691 OmpA family GO994_08515 PF04536 TPM domain GO994_08525 PF03411 Penicillin-insensitive murein endopeptidase GO994_08530 PF00528 Binding-protein-dependent transport system inner membrane component GO994_08535 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_08540 PF00528 Binding-protein-dependent transport system inner membrane component GO994_08565 PF00478 IMP dehydrogenase / GMP reductase domain GO994_08565 PF00571 CBS domain GO994_08570 PF00117 Glutamine amidotransferase class-I GO994_08570 PF00958 GMP synthase C terminal domain GO994_08570 PF02540 NAD synthase GO994_08590 PF13808 DDE_Tnp_1-associated GO994_08590 PF01609 Transposase DDE domain GO994_08600 PF05724 Thiopurine S-methyltransferase (TPMT) GO994_08605 PF05193 Peptidase M16 inactive domain GO994_08605 PF16187 Middle or third domain of peptidase_M16 GO994_08605 PF00675 Insulinase (Peptidase family M16) GO994_08610 PF00300 Histidine phosphatase superfamily (branch 1) GO994_08620 PF00892 EamA-like transporter family GO994_08625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_08630 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GO994_08635 PF03461 TRCF domain GO994_08635 PF02559 CarD-like/TRCF domain GO994_08635 PF00270 DEAD/DEAH box helicase GO994_08635 PF00271 Helicase conserved C-terminal domain GO994_08635 PF17757 UvrB interaction domain GO994_08645 PF12704 MacB-like periplasmic core domain GO994_08645 PF02687 FtsX-like permease family GO994_08650 PF00005 ABC transporter GO994_08655 PF02687 FtsX-like permease family GO994_08655 PF12704 MacB-like periplasmic core domain GO994_08670 PF05698 Bacterial trigger factor protein (TF) C-terminus GO994_08670 PF05697 Bacterial trigger factor protein (TF) GO994_08670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO994_08675 PF00574 Clp protease GO994_08680 PF06689 ClpX C4-type zinc finger GO994_08680 PF10431 C-terminal, D2-small domain, of ClpB protein GO994_08680 PF07724 AAA domain (Cdc48 subfamily) GO994_08685 PF02190 ATP-dependent protease La (LON) substrate-binding domain GO994_08685 PF05362 Lon protease (S16) C-terminal proteolytic domain GO994_08685 PF00004 ATPase family associated with various cellular activities (AAA) GO994_08690 PF00216 Bacterial DNA-binding protein GO994_08695 PF13145 PPIC-type PPIASE domain GO994_08700 PF12848 ABC transporter GO994_08700 PF00005 ABC transporter GO994_08705 PF00474 Sodium:solute symporter family GO994_08710 PF04341 Protein of unknown function, DUF485 GO994_08735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GO994_08735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GO994_08735 PF00378 Enoyl-CoA hydratase/isomerase GO994_08740 PF01235 Sodium:alanine symporter family GO994_08745 PF00583 Acetyltransferase (GNAT) family GO994_08755 PF01184 GPR1/FUN34/yaaH family GO994_08775 PF13808 DDE_Tnp_1-associated GO994_08775 PF01609 Transposase DDE domain GO994_08795 PF03553 Na+/H+ antiporter family GO994_08800 PF00265 Thymidine kinase GO994_08810 PF10722 Putative bacterial sensory transduction regulator GO994_08820 PF01168 Alanine racemase, N-terminal domain GO994_08820 PF00842 Alanine racemase, C-terminal domain GO994_08825 PF01609 Transposase DDE domain GO994_08825 PF13808 DDE_Tnp_1-associated GO994_08840 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal GO994_08840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GO994_08845 PF13247 4Fe-4S dicluster domain GO994_08850 PF03916 Polysulphide reductase, NrfD GO994_08855 PF00374 Nickel-dependent hydrogenase GO994_08860 PF01750 Hydrogenase maturation protease GO994_08865 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE GO994_08870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_08875 PF00528 Binding-protein-dependent transport system inner membrane component GO994_08880 PF12911 N-terminal TM domain of oligopeptide transport permease C GO994_08880 PF00528 Binding-protein-dependent transport system inner membrane component GO994_08885 PF00005 ABC transporter GO994_08890 PF08402 TOBE domain GO994_08890 PF00005 ABC transporter GO994_08895 PF02492 CobW/HypB/UreG, nucleotide-binding domain GO994_08900 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GO994_08905 PF00586 AIR synthase related protein, N-terminal domain GO994_08905 PF02769 AIR synthase related protein, C-terminal domain GO994_08910 PF01924 Hydrogenase formation hypA family GO994_08915 PF01455 HupF/HypC family GO994_08920 PF01300 Telomere recombination GO994_08920 PF00708 Acylphosphatase GO994_08920 PF17788 HypF Kae1-like domain GO994_08920 PF07503 HypF finger GO994_08925 PF09106 Elongation factor SelB, winged helix GO994_08925 PF03144 Elongation factor Tu domain 2 GO994_08925 PF09105 Elongation factor SelB, winged helix GO994_08925 PF00009 Elongation factor Tu GTP binding domain GO994_08925 PF09107 Elongation factor SelB, winged helix GO994_08930 PF12390 Selenocysteine synthase N terminal GO994_08930 PF03841 L-seryl-tRNA selenium transferase GO994_08940 PF01750 Hydrogenase maturation protease GO994_08945 PF07450 Formate hydrogenlyase maturation protein HycH GO994_08950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GO994_08955 PF12838 4Fe-4S dicluster domain GO994_08960 PF00374 Nickel-dependent hydrogenase GO994_08960 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GO994_08960 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GO994_08965 PF00146 NADH dehydrogenase GO994_08970 PF00361 Proton-conducting membrane transporter GO994_08975 PF00037 4Fe-4S binding domain GO994_08975 PF12798 4Fe-4S binding domain GO994_08980 PF02705 K+ potassium transporter GO994_09005 PF00872 Transposase, Mutator family GO994_09010 PF01609 Transposase DDE domain GO994_09020 PF09013 YopH, N-terminal GO994_09020 PF00102 Protein-tyrosine phosphatase GO994_09060 PF01047 MarR family GO994_09060 PF00480 ROK family GO994_09065 PF01979 Amidohydrolase family GO994_09070 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GO994_09080 PF02838 Glycosyl hydrolase family 20, domain 2 GO994_09080 PF00728 Glycosyl hydrolase family 20, catalytic domain GO994_09080 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GO994_09080 PF03173 Putative carbohydrate binding domain GO994_09085 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GO994_09085 PF00749 tRNA synthetases class I (E and Q), catalytic domain GO994_09090 PF01475 Ferric uptake regulator family GO994_09100 PF00258 Flavodoxin GO994_09105 PF01402 Ribbon-helix-helix protein, copG family GO994_09115 PF12697 Alpha/beta hydrolase family GO994_09120 PF03925 SeqA protein C-terminal domain GO994_09120 PF17206 SeqA protein N-terminal domain GO994_09125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GO994_09125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GO994_09125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GO994_09125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GO994_09135 PF01047 MarR family GO994_09140 PF13406 Transglycosylase SLT domain GO994_09145 PF01066 CDP-alcohol phosphatidyltransferase GO994_09150 PF00005 ABC transporter GO994_09155 PF00528 Binding-protein-dependent transport system inner membrane component GO994_09160 PF13416 Bacterial extracellular solute-binding protein GO994_09165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO994_09165 PF00403 Heavy-metal-associated domain GO994_09165 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_09170 PF02627 Carboxymuconolactone decarboxylase family GO994_09180 PF01625 Peptide methionine sulfoxide reductase GO994_09200 PF17243 POTRA domain TamA domain 1 GO994_09200 PF07244 Surface antigen variable number repeat GO994_09200 PF01103 Surface antigen GO994_09205 PF04357 TamB, inner membrane protein subunit of TAM complex GO994_09220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GO994_09225 PF00990 Diguanylate cyclase, GGDEF domain GO994_09225 PF03707 Bacterial signalling protein N terminal repeat GO994_09225 PF00563 EAL domain GO994_09230 PF01464 Transglycosylase SLT domain GO994_09230 PF14718 Soluble lytic murein transglycosylase L domain GO994_09235 PF00356 Bacterial regulatory proteins, lacI family GO994_09245 PF03061 Thioesterase superfamily GO994_09255 PF03372 Endonuclease/Exonuclease/phosphatase family GO994_09260 PF01464 Transglycosylase SLT domain GO994_09260 PF01476 LysM domain GO994_09265 PF16123 Hydroxyacylglutathione hydrolase C-terminus GO994_09265 PF00753 Metallo-beta-lactamase superfamily GO994_09270 PF08241 Methyltransferase domain GO994_09275 PF00075 RNase H GO994_09280 PF00929 Exonuclease GO994_09310 PF09317 Domain of unknown function (DUF1974) GO994_09310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GO994_09310 PF02770 Acyl-CoA dehydrogenase, middle domain GO994_09310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GO994_09315 PF13580 SIS domain GO994_09320 PF13230 Glutamine amidotransferases class-II GO994_09330 PF01933 Uncharacterised protein family UPF0052 GO994_09340 PF00072 Response regulator receiver domain GO994_09340 PF17149 Periplasmic sensor domain found in signal transduction proteins GO994_09340 PF00672 HAMP domain GO994_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_09340 PF00512 His Kinase A (phospho-acceptor) domain GO994_09340 PF01627 Hpt domain GO994_09350 PF00072 Response regulator receiver domain GO994_09350 PF00196 Bacterial regulatory proteins, luxR family GO994_09355 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GO994_09355 PF07730 Histidine kinase GO994_09355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_09355 PF00672 HAMP domain GO994_09360 PF06463 Molybdenum Cofactor Synthesis C GO994_09360 PF04055 Radical SAM superfamily GO994_09365 PF13187 4Fe-4S dicluster domain GO994_09365 PF12838 4Fe-4S dicluster domain GO994_09375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO994_09375 PF10518 TAT (twin-arginine translocation) pathway signal sequence GO994_09375 PF01568 Molydopterin dinucleotide binding domain GO994_09375 PF00384 Molybdopterin oxidoreductase GO994_09380 PF12838 4Fe-4S dicluster domain GO994_09380 PF12800 4Fe-4S binding domain GO994_09385 PF12837 4Fe-4S binding domain GO994_09385 PF12801 4Fe-4S binding domain GO994_09390 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GO994_09395 PF03264 NapC/NirT cytochrome c family, N-terminal region GO994_09405 PF01967 MoaC family GO994_09410 PF02597 ThiS family GO994_09415 PF02391 MoaE protein GO994_09425 PF00528 Binding-protein-dependent transport system inner membrane component GO994_09430 PF00005 ABC transporter GO994_09430 PF03459 TOBE domain GO994_09435 PF00561 alpha/beta hydrolase fold GO994_09440 PF06406 StbA protein GO994_09450 PF06291 Bor protein GO994_09455 PF06291 Bor protein GO994_09460 PF00899 ThiF family GO994_09465 PF00994 Probable molybdopterin binding domain GO994_09465 PF03454 MoeA C-terminal region (domain IV) GO994_09465 PF03453 MoeA N-terminal region (domain I and II) GO994_09470 PF01227 GTP cyclohydrolase I GO994_09475 PF17200 Single Cache domain 2 GO994_09475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_09475 PF00672 HAMP domain GO994_09480 PF01268 Formate--tetrahydrofolate ligase GO994_09490 PF03466 LysR substrate binding domain GO994_09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_09495 PF04264 YceI-like domain GO994_09530 PF07687 Peptidase dimerisation domain GO994_09530 PF01546 Peptidase family M20/M25/M40 GO994_09540 PF17810 Arginine decarboxylase helical bundle domain GO994_09540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GO994_09540 PF17944 Arginine decarboxylase C-terminal helical extension GO994_09555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GO994_09565 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GO994_09565 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GO994_09570 PF00849 RNA pseudouridylate synthase GO994_09570 PF01479 S4 domain GO994_09575 PF07690 Major Facilitator Superfamily GO994_09585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_09585 PF03466 LysR substrate binding domain GO994_09595 PF10689 Protein of unknown function (DUF2496) GO994_09605 PF04391 Protein of unknown function (DUF533) GO994_09610 PF00392 Bacterial regulatory proteins, gntR family GO994_09610 PF00155 Aminotransferase class I and II GO994_09615 PF01654 Cytochrome bd terminal oxidase subunit I GO994_09645 PF07690 Major Facilitator Superfamily GO994_09650 PF00248 Aldo/keto reductase family GO994_09655 PF03992 Antibiotic biosynthesis monooxygenase GO994_09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_09680 PF03466 LysR substrate binding domain GO994_09685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GO994_09685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GO994_09690 PF00230 Major intrinsic protein GO994_09695 PF07690 Major Facilitator Superfamily GO994_09700 PF08220 DeoR-like helix-turn-helix domain GO994_09700 PF00455 DeoR C terminal sensor domain GO994_09710 PF01266 FAD dependent oxidoreductase GO994_09710 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GO994_09715 PF03009 Glycerophosphoryl diester phosphodiesterase family GO994_09720 PF00793 DAHP synthetase I family GO994_09725 PF01817 Chorismate mutase type II GO994_09725 PF02153 Prephenate dehydrogenase GO994_09730 PF03466 LysR substrate binding domain GO994_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_09735 PF04219 Protein of unknown function, DUF GO994_09740 PF03974 Ecotin GO994_09760 PF00326 Prolyl oligopeptidase family GO994_09760 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GO994_09765 PF07715 TonB-dependent Receptor Plug Domain GO994_09765 PF00593 TonB dependent receptor GO994_09770 PF11893 Domain of unknown function (DUF3413) GO994_09770 PF00884 Sulfatase GO994_09775 PF07208 Protein of unknown function (DUF1414) GO994_09780 PF04245 37-kD nucleoid-associated bacterial protein GO994_09790 PF01547 Bacterial extracellular solute-binding protein GO994_09795 PF14785 Maltose transport system permease protein MalF P2 domain GO994_09795 PF00528 Binding-protein-dependent transport system inner membrane component GO994_09800 PF00528 Binding-protein-dependent transport system inner membrane component GO994_09805 PF08402 TOBE domain GO994_09805 PF00005 ABC transporter GO994_09810 PF03976 Polyphosphate kinase 2 (PPK2) GO994_09815 PF00561 alpha/beta hydrolase fold GO994_09820 PF01594 AI-2E family transporter GO994_09825 PF01206 Sulfurtransferase TusA GO994_09830 PF07720 Tetratricopeptide repeat GO994_09830 PF01435 Peptidase family M48 GO994_09840 PF03960 ArsC family GO994_09850 PF04336 Acyl carrier protein phosphodiesterase GO994_09855 PF03956 Lysine exporter LysO GO994_09860 PF00005 ABC transporter GO994_09865 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_09870 PF00528 Binding-protein-dependent transport system inner membrane component GO994_09875 PF00528 Binding-protein-dependent transport system inner membrane component GO994_09890 PF04055 Radical SAM superfamily GO994_09895 PF00563 EAL domain GO994_09895 PF00990 Diguanylate cyclase, GGDEF domain GO994_09895 PF03707 Bacterial signalling protein N terminal repeat GO994_09900 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_09900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO994_09905 PF01835 MG2 domain GO994_09905 PF00207 Alpha-2-macroglobulin family GO994_09905 PF07703 Alpha-2-macroglobulin bait region domain GO994_09905 PF17962 Bacterial macroglobulin domain 6 GO994_09905 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain GO994_09905 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain GO994_09905 PF11974 Bacterial alpha-2-macroglobulin MG3 domain GO994_09905 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain GO994_09905 PF07678 A-macroglobulin TED domain GO994_09910 PF00905 Penicillin binding protein transpeptidase domain GO994_09910 PF00912 Transglycosylase GO994_09910 PF06832 Penicillin-Binding Protein C-terminus Family GO994_09920 PF02568 Thiamine biosynthesis protein (ThiI) GO994_09920 PF02926 THUMP domain GO994_09930 PF03458 UPF0126 domain GO994_09950 PF00700 Bacterial flagellin C-terminal helical region GO994_09950 PF00669 Bacterial flagellin N-terminal helical region GO994_09965 PF01497 Periplasmic binding protein GO994_09975 PF01048 Phosphorylase superfamily GO994_09985 PF02535 ZIP Zinc transporter GO994_09990 PF12729 Four helix bundle sensory module for signal transduction GO994_09990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_09990 PF00672 HAMP domain GO994_09995 PF00459 Inositol monophosphatase family GO994_10020 PF00043 Glutathione S-transferase, C-terminal domain GO994_10020 PF02798 Glutathione S-transferase, N-terminal domain GO994_10030 PF00528 Binding-protein-dependent transport system inner membrane component GO994_10035 PF00528 Binding-protein-dependent transport system inner membrane component GO994_10035 PF12911 N-terminal TM domain of oligopeptide transport permease C GO994_10040 PF00005 ABC transporter GO994_10045 PF07690 Major Facilitator Superfamily GO994_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_10050 PF03466 LysR substrate binding domain GO994_10055 PF02634 FdhD/NarQ family GO994_10060 PF00384 Molybdopterin oxidoreductase GO994_10070 PF05164 Cell division protein ZapA GO994_10075 PF03695 Uncharacterised protein family (UPF0149) GO994_10080 PF01494 FAD binding domain GO994_10085 PF01494 FAD binding domain GO994_10090 PF08669 Glycine cleavage T-protein C-terminal barrel domain GO994_10090 PF01571 Aminomethyltransferase folate-binding domain GO994_10095 PF01597 Glycine cleavage H-protein GO994_10100 PF02347 Glycine cleavage system P-protein GO994_10110 PF07690 Major Facilitator Superfamily GO994_10115 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_10115 PF13192 Thioredoxin domain GO994_10120 PF10417 C-terminal domain of 1-Cys peroxiredoxin GO994_10120 PF00578 AhpC/TSA family GO994_10125 PF00571 CBS domain GO994_10130 PF02547 Queuosine biosynthesis protein GO994_10135 PF01702 Queuine tRNA-ribosyltransferase GO994_10140 PF02699 Preprotein translocase subunit GO994_10145 PF02355 Protein export membrane protein GO994_10145 PF07549 SecD/SecF GG Motif GO994_10145 PF13721 SecD export protein N-terminal TM region GO994_10150 PF02355 Protein export membrane protein GO994_10150 PF07549 SecD/SecF GG Motif GO994_10155 PF00581 Rhodanese-like domain GO994_10160 PF13181 Tetratricopeptide repeat GO994_10160 PF07719 Tetratricopeptide repeat GO994_10185 PF00588 SpoU rRNA Methylase family GO994_10190 PF02082 Transcriptional regulator GO994_10195 PF00266 Aminotransferase class-V GO994_10200 PF01592 NifU-like N terminal domain GO994_10205 PF01521 Iron-sulphur cluster biosynthesis GO994_10210 PF00226 DnaJ domain GO994_10210 PF07743 HSCB C-terminal oligomerisation domain GO994_10215 PF00012 Hsp70 protein GO994_10220 PF00111 2Fe-2S iron-sulfur cluster binding domain GO994_10225 PF12404 Peptidase GO994_10225 PF00883 Cytosol aminopeptidase family, catalytic domain GO994_10230 PF00883 Cytosol aminopeptidase family, catalytic domain GO994_10230 PF12404 Peptidase GO994_10235 PF00334 Nucleoside diphosphate kinase GO994_10240 PF04055 Radical SAM superfamily GO994_10250 PF13464 Domain of unknown function (DUF4115) GO994_10255 PF04551 GcpE protein GO994_10260 PF13393 Histidyl-tRNA synthetase GO994_10260 PF03129 Anticodon binding domain GO994_10265 PF09976 Tetratricopeptide repeat-like domain GO994_10270 PF13360 PQQ-like domain GO994_10275 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GO994_10275 PF01926 50S ribosome-binding GTPase GO994_10280 PF07191 zinc-ribbons GO994_10285 PF01464 Transglycosylase SLT domain GO994_10285 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_10290 PF02769 AIR synthase related protein, C-terminal domain GO994_10290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GO994_10290 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GO994_10300 PF05661 Protein of unknown function (DUF808) GO994_10305 PF01432 Peptidase family M3 GO994_10305 PF08439 Oligopeptidase F GO994_10320 PF13808 DDE_Tnp_1-associated GO994_10320 PF01609 Transposase DDE domain GO994_10330 PF00682 HMGL-like GO994_10350 PF00378 Enoyl-CoA hydratase/isomerase GO994_10355 PF01039 Carboxyl transferase domain GO994_10360 PF02770 Acyl-CoA dehydrogenase, middle domain GO994_10360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GO994_10360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GO994_10365 PF00171 Aldehyde dehydrogenase family GO994_10375 PF00378 Enoyl-CoA hydratase/isomerase GO994_10380 PF00378 Enoyl-CoA hydratase/isomerase GO994_10385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GO994_10385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GO994_10395 PF13520 Amino acid permease GO994_10400 PF01925 Sulfite exporter TauE/SafE GO994_10420 PF00872 Transposase, Mutator family GO994_10440 PF00356 Bacterial regulatory proteins, lacI family GO994_10440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GO994_10445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GO994_10445 PF00381 PTS HPr component phosphorylation site GO994_10450 PF00294 pfkB family carbohydrate kinase GO994_10455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GO994_10455 PF02378 Phosphotransferase system, EIIC GO994_10460 PF06945 Protein of unknown function (DUF1289) GO994_10465 PF03562 MltA specific insert domain GO994_10465 PF06725 3D domain GO994_10470 PF00111 2Fe-2S iron-sulfur cluster binding domain GO994_10475 PF00268 Ribonucleotide reductase, small chain GO994_10480 PF00317 Ribonucleotide reductase, all-alpha domain GO994_10480 PF02867 Ribonucleotide reductase, barrel domain GO994_10480 PF03477 ATP cone domain GO994_10485 PF13419 Haloacid dehalogenase-like hydrolase GO994_10495 PF03989 DNA gyrase C-terminal domain, beta-propeller GO994_10495 PF00521 DNA gyrase/topoisomerase IV, subunit A GO994_10510 PF02824 TGS domain GO994_10510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GO994_10510 PF03129 Anticodon binding domain GO994_10510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GO994_10515 PF05198 Translation initiation factor IF-3, N-terminal domain GO994_10515 PF00707 Translation initiation factor IF-3, C-terminal domain GO994_10520 PF01632 Ribosomal protein L35 GO994_10525 PF00453 Ribosomal protein L20 GO994_10530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GO994_10530 PF01409 tRNA synthetases class II core domain (F) GO994_10535 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GO994_10535 PF03484 tRNA synthetase B5 domain GO994_10535 PF03147 Ferredoxin-fold anticodon binding domain GO994_10535 PF03483 B3/4 domain GO994_10535 PF01588 Putative tRNA binding domain GO994_10540 PF00216 Bacterial DNA-binding protein GO994_10560 PF02146 Sir2 family GO994_10570 PF00990 Diguanylate cyclase, GGDEF domain GO994_10570 PF00563 EAL domain GO994_10570 PF03707 Bacterial signalling protein N terminal repeat GO994_10575 PF00356 Bacterial regulatory proteins, lacI family GO994_10580 PF00294 pfkB family carbohydrate kinase GO994_10585 PF13407 Periplasmic binding protein domain GO994_10590 PF02653 Branched-chain amino acid transport system / permease component GO994_10595 PF00005 ABC transporter GO994_10600 PF05025 RbsD / FucU transport protein family GO994_10605 PF02798 Glutathione S-transferase, N-terminal domain GO994_10605 PF00043 Glutathione S-transferase, C-terminal domain GO994_10620 PF01171 PP-loop family GO994_10625 PF00582 Universal stress protein family GO994_10630 PF13545 Crp-like helix-turn-helix domain GO994_10630 PF00027 Cyclic nucleotide-binding domain GO994_10645 PF00403 Heavy-metal-associated domain GO994_10655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GO994_10655 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GO994_10670 PF00115 Cytochrome C and Quinol oxidase polypeptide I GO994_10680 PF13185 GAF domain GO994_10685 PF17516 ProQ C-terminal domain GO994_10685 PF04352 ProQ/FINO family GO994_10690 PF03572 Peptidase family S41 GO994_10690 PF00595 PDZ domain GO994_10690 PF11818 C-terminal domain of tail specific protease (DUF3340) GO994_10690 PF17804 Tail specific protease N-terminal domain GO994_10695 PF11940 Domain of unknown function (DUF3458) Ig-like fold GO994_10695 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GO994_10695 PF01433 Peptidase family M1 domain GO994_10720 PF01180 Dihydroorotate dehydrogenase GO994_10725 PF07126 Cell-division protein ZapC GO994_10740 PF07745 Glycosyl hydrolase family 53 GO994_10745 PF08533 Beta-galactosidase C-terminal domain GO994_10745 PF08532 Beta-galactosidase trimerisation domain GO994_10745 PF02449 Beta-galactosidase GO994_10750 PF00367 phosphotransferase system, EIIB GO994_10750 PF02378 Phosphotransferase system, EIIC GO994_10760 PF00444 Ribosomal protein L36 GO994_10765 PF01197 Ribosomal protein L31 GO994_10780 PF01863 Protein of unknown function DUF45 GO994_10795 PF03606 C4-dicarboxylate anaerobic carrier GO994_10805 PF01266 FAD dependent oxidoreductase GO994_10805 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GO994_10810 PF00109 Beta-ketoacyl synthase, N-terminal domain GO994_10810 PF02801 Beta-ketoacyl synthase, C-terminal domain GO994_10825 PF00285 Citrate synthase, C-terminal domain GO994_10830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GO994_10835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GO994_10840 PF02910 Fumarate reductase flavoprotein C-term GO994_10840 PF00890 FAD binding domain GO994_10845 PF13085 2Fe-2S iron-sulfur cluster binding domain GO994_10850 PF02779 Transketolase, pyrimidine binding domain GO994_10850 PF16870 2-oxoglutarate dehydrogenase C-terminal GO994_10850 PF00676 Dehydrogenase E1 component GO994_10850 PF16078 2-oxoglutarate dehydrogenase N-terminus GO994_10855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GO994_10855 PF02817 e3 binding domain GO994_10855 PF00364 Biotin-requiring enzyme GO994_10860 PF08442 ATP-grasp domain GO994_10860 PF00549 CoA-ligase GO994_10865 PF00549 CoA-ligase GO994_10865 PF02629 CoA binding domain GO994_10870 PF03692 Putative zinc- or iron-chelating domain GO994_10875 PF02901 Pyruvate formate lyase-like GO994_10875 PF01228 Glycine radical GO994_10880 PF01226 Formate/nitrite transporter GO994_10885 PF18381 YcaO cyclodehydratase C-terminal domain GO994_10885 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding GO994_10890 PF01118 Semialdehyde dehydrogenase, NAD binding domain GO994_10890 PF02774 Semialdehyde dehydrogenase, dimerisation domain GO994_10910 PF01609 Transposase DDE domain GO994_10910 PF13808 DDE_Tnp_1-associated GO994_10950 PF07152 YaeQ protein GO994_10960 PF07690 Major Facilitator Superfamily GO994_10965 PF00005 ABC transporter GO994_10970 PF01032 FecCD transport family GO994_10990 PF05433 Glycine zipper 2TM domain GO994_11000 PF03606 C4-dicarboxylate anaerobic carrier GO994_11035 PF00343 Carbohydrate phosphorylase GO994_11040 PF00939 Sodium:sulfate symporter transmembrane region GO994_11045 PF00085 Thioredoxin GO994_11050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_11050 PF01627 Hpt domain GO994_11050 PF00072 Response regulator receiver domain GO994_11050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GO994_11050 PF00672 HAMP domain GO994_11050 PF00512 His Kinase A (phospho-acceptor) domain GO994_11060 PF00664 ABC transporter transmembrane region GO994_11060 PF00005 ABC transporter GO994_11075 PF01575 MaoC like domain GO994_11080 PF00561 alpha/beta hydrolase fold GO994_11080 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GO994_11100 PF08543 Phosphomethylpyrimidine kinase GO994_11105 PF03992 Antibiotic biosynthesis monooxygenase GO994_11110 PF00465 Iron-containing alcohol dehydrogenase GO994_11130 PF01928 CYTH domain GO994_11155 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GO994_11165 PF13673 Acetyltransferase (GNAT) domain GO994_11170 PF00271 Helicase conserved C-terminal domain GO994_11170 PF00270 DEAD/DEAH box helicase GO994_11175 PF00255 Glutathione peroxidase GO994_11185 PF01820 D-ala D-ala ligase N-terminus GO994_11185 PF07478 D-ala D-ala ligase C-terminus GO994_11200 PF01925 Sulfite exporter TauE/SafE GO994_11205 PF03466 LysR substrate binding domain GO994_11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_11220 PF11398 Protein of unknown function (DUF2813) GO994_11230 PF00128 Alpha amylase, catalytic domain GO994_11230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GO994_11280 PF13419 Haloacid dehalogenase-like hydrolase GO994_11295 PF13808 DDE_Tnp_1-associated GO994_11295 PF01609 Transposase DDE domain GO994_11355 PF00102 Protein-tyrosine phosphatase GO994_11355 PF09013 YopH, N-terminal GO994_11365 PF13358 DDE superfamily endonuclease GO994_11365 PF13592 Winged helix-turn helix GO994_11390 PF01713 Smr domain GO994_11395 PF05175 Methyltransferase small domain GO994_11400 PF01264 Chorismate synthase GO994_11410 PF00270 DEAD/DEAH box helicase GO994_11410 PF00271 Helicase conserved C-terminal domain GO994_11445 PF05362 Lon protease (S16) C-terminal proteolytic domain GO994_11445 PF13654 AAA domain GO994_11450 PF07977 FabA-like domain GO994_11455 PF04957 Ribosome modulation factor GO994_11475 PF10672 S-adenosylmethionine-dependent methyltransferase GO994_11475 PF02926 THUMP domain GO994_11475 PF01170 Putative RNA methylase family UPF0020 GO994_11490 PF01381 Helix-turn-helix GO994_11520 PF00106 short chain dehydrogenase GO994_11545 PF06974 Protein of unknown function (DUF1298) GO994_11545 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain GO994_11560 PF03972 MmgE/PrpD family GO994_11565 PF00285 Citrate synthase, C-terminal domain GO994_11580 PF04403 Paraquat-inducible protein A GO994_11585 PF02470 MlaD protein GO994_11590 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GO994_11590 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GO994_11590 PF01189 16S rRNA methyltransferase RsmB/F GO994_11600 PF00589 Phage integrase family GO994_11605 PF01026 TatD related DNase GO994_11610 PF09115 DNA polymerase III, delta subunit, C terminal GO994_11615 PF02223 Thymidylate kinase GO994_11620 PF02618 YceG-like family GO994_11625 PF01063 Amino-transferase class IV GO994_11630 PF02801 Beta-ketoacyl synthase, C-terminal domain GO994_11630 PF00109 Beta-ketoacyl synthase, N-terminal domain GO994_11635 PF00550 Phosphopantetheine attachment site GO994_11645 PF00698 Acyl transferase domain GO994_11650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GO994_11650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO994_11655 PF02504 Fatty acid synthesis protein GO994_11660 PF01783 Ribosomal L32p protein family GO994_11665 PF02620 Large ribosomal RNA subunit accumulation protein YceD GO994_11670 PF02545 Maf-like protein GO994_11680 PF01479 S4 domain GO994_11680 PF00849 RNA pseudouridylate synthase GO994_11685 PF00575 S1 RNA binding domain GO994_11685 PF12111 Polyribonucleotide phosphorylase C terminal GO994_11685 PF10150 Ribonuclease E/G family GO994_11695 PF00692 dUTPase GO994_11700 PF00485 Phosphoribulokinase / Uridine kinase family GO994_11705 PF10609 NUBPL iron-transfer P-loop NTPase GO994_11710 PF09334 tRNA synthetases class I (M) GO994_11710 PF08264 Anticodon-binding domain of tRNA GO994_11710 PF01588 Putative tRNA binding domain GO994_11715 PF00043 Glutathione S-transferase, C-terminal domain GO994_11715 PF13417 Glutathione S-transferase, N-terminal domain GO994_11720 PF00708 Acylphosphatase GO994_11735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_11735 PF00672 HAMP domain GO994_11735 PF12729 Four helix bundle sensory module for signal transduction GO994_11740 PF17785 PUA-like domain GO994_11740 PF10672 S-adenosylmethionine-dependent methyltransferase GO994_11755 PF02769 AIR synthase related protein, C-terminal domain GO994_11755 PF00586 AIR synthase related protein, N-terminal domain GO994_11765 PF00753 Metallo-beta-lactamase superfamily GO994_11770 PF01386 Ribosomal L25p family GO994_11780 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GO994_11780 PF11898 Domain of unknown function (DUF3418) GO994_11780 PF00271 Helicase conserved C-terminal domain GO994_11780 PF00270 DEAD/DEAH box helicase GO994_11780 PF04408 Helicase associated domain (HA2) GO994_11790 PF00196 Bacterial regulatory proteins, luxR family GO994_11790 PF00072 Response regulator receiver domain GO994_11800 PF02575 YbaB/EbfC DNA-binding family GO994_11805 PF12169 DNA polymerase III subunits gamma and tau domain III GO994_11805 PF12170 DNA polymerase III tau subunit V interacting with alpha GO994_11805 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GO994_11810 PF00156 Phosphoribosyl transferase domain GO994_11815 PF04304 Protein of unknown function (DUF454) GO994_11820 PF01207 Dihydrouridine synthase (Dus) GO994_11835 PF01612 3'-5' exonuclease GO994_11835 PF00570 HRDC domain GO994_11840 PF00501 AMP-binding enzyme GO994_11840 PF13193 AMP-binding enzyme C-terminal domain GO994_11845 PF12697 Alpha/beta hydrolase family GO994_11855 PF00814 Glycoprotease family GO994_11860 PF04851 Type III restriction enzyme, res subunit GO994_11860 PF13307 Helicase C-terminal domain GO994_11870 PF08029 HisG, C-terminal domain GO994_11870 PF01634 ATP phosphoribosyltransferase GO994_11875 PF00815 Histidinol dehydrogenase GO994_11880 PF00155 Aminotransferase class I and II GO994_11885 PF00475 Imidazoleglycerol-phosphate dehydratase GO994_11885 PF08645 Polynucleotide kinase 3 phosphatase GO994_11890 PF00117 Glutamine amidotransferase class-I GO994_11895 PF00977 Histidine biosynthesis protein GO994_11900 PF00072 Response regulator receiver domain GO994_11910 PF01627 Hpt domain GO994_11910 PF00512 His Kinase A (phospho-acceptor) domain GO994_11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_11910 PF00072 Response regulator receiver domain GO994_11915 PF00977 Histidine biosynthesis protein GO994_11920 PF01502 Phosphoribosyl-AMP cyclohydrolase GO994_11920 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GO994_11930 PF08279 HTH domain GO994_11930 PF13280 WYL domain GO994_11965 PF00293 NUDIX domain GO994_11970 PF03222 Tryptophan/tyrosine permease family GO994_11975 PF00375 Sodium:dicarboxylate symporter family GO994_11980 PF16124 RecQ zinc-binding GO994_11980 PF00270 DEAD/DEAH box helicase GO994_11980 PF00271 Helicase conserved C-terminal domain GO994_11980 PF00570 HRDC domain GO994_11980 PF09382 RQC domain GO994_11985 PF06798 PrkA serine protein kinase C-terminal domain GO994_11985 PF08298 PrkA AAA domain GO994_11990 PF04285 Protein of unknown function (DUF444) GO994_11995 PF04293 SpoVR like protein GO994_12000 PF00392 Bacterial regulatory proteins, gntR family GO994_12000 PF07840 FadR C-terminal domain GO994_12005 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GO994_12010 PF02600 Disulfide bond formation protein DsbB GO994_12015 PF09335 SNARE associated Golgi protein GO994_12025 PF00271 Helicase conserved C-terminal domain GO994_12025 PF04851 Type III restriction enzyme, res subunit GO994_12025 PF12344 Ultra-violet resistance protein B GO994_12025 PF02151 UvrB/uvrC motif GO994_12025 PF17757 UvrB interaction domain GO994_12035 PF06826 Predicted Permease Membrane Region GO994_12035 PF02080 TrkA-C domain GO994_12040 PF01464 Transglycosylase SLT domain GO994_12040 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_12055 PF01970 Tripartite tricarboxylate transporter TctA family GO994_12060 PF12431 Transcriptional regulator GO994_12060 PF08279 HTH domain GO994_12060 PF00072 Response regulator receiver domain GO994_12070 PF01047 MarR family GO994_12070 PF00480 ROK family GO994_12075 PF17200 Single Cache domain 2 GO994_12075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_12075 PF00672 HAMP domain GO994_12080 PF02810 SEC-C motif GO994_12085 PF04324 BFD-like [2Fe-2S] binding domain GO994_12085 PF01266 FAD dependent oxidoreductase GO994_12090 PF00890 FAD binding domain GO994_12095 PF02754 Cysteine-rich domain GO994_12095 PF13183 4Fe-4S dicluster domain GO994_12100 PF02335 Cytochrome c552 GO994_12105 PF13435 Cytochrome c554 and c-prime GO994_12105 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) GO994_12110 PF13247 4Fe-4S dicluster domain GO994_12110 PF00037 4Fe-4S binding domain GO994_12115 PF03916 Polysulphide reductase, NrfD GO994_12120 PF01578 Cytochrome C assembly protein GO994_12120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GO994_12125 PF08534 Redoxin GO994_12130 PF03918 Cytochrome C biogenesis protein GO994_12140 PF00768 D-alanyl-D-alanine carboxypeptidase GO994_12145 PF01212 Beta-eliminating lyase GO994_12160 PF01266 FAD dependent oxidoreductase GO994_12195 PF01717 Cobalamin-independent synthase, Catalytic domain GO994_12195 PF08267 Cobalamin-independent synthase, N-terminal domain GO994_12210 PF07715 TonB-dependent Receptor Plug Domain GO994_12210 PF00593 TonB dependent receptor GO994_12215 PF12833 Helix-turn-helix domain GO994_12215 PF06445 GyrI-like small molecule binding domain GO994_12220 PF00106 short chain dehydrogenase GO994_12225 PF03466 LysR substrate binding domain GO994_12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_12240 PF01053 Cys/Met metabolism PLP-dependent enzyme GO994_12280 PF05036 Sporulation related domain GO994_12280 PF03330 Lytic transglycolase GO994_12285 PF16330 MukB hinge domain GO994_12285 PF04310 MukB N-terminal GO994_12290 PF04288 MukE-like family GO994_12295 PF17193 MukF C-terminal domain GO994_12295 PF03882 MukF winged-helix domain GO994_12295 PF17192 MukF middle domain GO994_12305 PF02698 DUF218 domain GO994_12310 PF00121 Triosephosphate isomerase GO994_12315 PF00365 Phosphofructokinase GO994_12355 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GO994_12385 PF08274 PhnA Zinc-Ribbon GO994_12385 PF03831 PhnA domain GO994_12390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GO994_12390 PF00378 Enoyl-CoA hydratase/isomerase GO994_12390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GO994_12395 PF00108 Thiolase, N-terminal domain GO994_12395 PF02803 Thiolase, C-terminal domain GO994_12400 PF17863 AAA lid domain GO994_12400 PF07726 ATPase family associated with various cellular activities (AAA) GO994_12415 PF17863 AAA lid domain GO994_12415 PF07728 AAA domain (dynein-related subfamily) GO994_12415 PF13519 von Willebrand factor type A domain GO994_12430 PF04545 Sigma-70, region 4 GO994_12430 PF04542 Sigma-70 region 2 GO994_12440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GO994_12445 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GO994_12450 PF08668 HDOD domain GO994_12450 PF00563 EAL domain GO994_12455 PF02803 Thiolase, C-terminal domain GO994_12455 PF00108 Thiolase, N-terminal domain GO994_12460 PF00376 MerR family regulatory protein GO994_12460 PF09278 MerR, DNA binding GO994_12465 PF00375 Sodium:dicarboxylate symporter family GO994_12470 PF06865 Pyrimidine/purine nucleoside phosphorylase GO994_12475 PF03315 Serine dehydratase beta chain GO994_12475 PF03313 Serine dehydratase alpha chain GO994_12480 PF03313 Serine dehydratase alpha chain GO994_12480 PF03315 Serine dehydratase beta chain GO994_12485 PF13406 Transglycosylase SLT domain GO994_12490 PF05166 YcgL domain GO994_12495 PF03775 Septum formation inhibitor MinC, C-terminal domain GO994_12495 PF05209 Septum formation inhibitor MinC, N-terminal domain GO994_12500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GO994_12505 PF03776 Septum formation topological specificity factor MinE GO994_12510 PF04269 Protein of unknown function, DUF440 GO994_12515 PF00912 Transglycosylase GO994_12520 PF04269 Protein of unknown function, DUF440 GO994_12530 PF13509 S1 domain GO994_12530 PF17783 CvfB-like winged helix domain GO994_12555 PF02525 Flavodoxin-like fold GO994_12560 PF00892 EamA-like transporter family GO994_12565 PF02222 ATP-grasp domain GO994_12570 PF13419 Haloacid dehalogenase-like hydrolase GO994_12580 PF00677 Lumazine binding domain GO994_12585 PF06786 Uncharacterised protein family (UPF0253) GO994_12590 PF01554 MatE GO994_12625 PF03104 DNA polymerase family B, exonuclease domain GO994_12625 PF00136 DNA polymerase family B GO994_12635 PF00990 Diguanylate cyclase, GGDEF domain GO994_12650 PF03279 Bacterial lipid A biosynthesis acyltransferase GO994_12655 PF03279 Bacterial lipid A biosynthesis acyltransferase GO994_12665 PF03466 LysR substrate binding domain GO994_12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_12670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GO994_12670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GO994_12675 PF01261 Xylose isomerase-like TIM barrel GO994_12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_12680 PF03466 LysR substrate binding domain GO994_12690 PF00232 Glycosyl hydrolase family 1 GO994_12695 PF03466 LysR substrate binding domain GO994_12695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_12700 PF01609 Transposase DDE domain GO994_12700 PF13808 DDE_Tnp_1-associated GO994_12735 PF00005 ABC transporter GO994_12735 PF17912 MalK OB fold domain GO994_12745 PF00672 HAMP domain GO994_12745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_12755 PF07745 Glycosyl hydrolase family 53 GO994_12760 PF07745 Glycosyl hydrolase family 53 GO994_12765 PF02264 LamB porin GO994_12770 PF00356 Bacterial regulatory proteins, lacI family GO994_12775 PF16363 GDP-mannose 4,6 dehydratase GO994_12785 PF08544 GHMP kinases C terminal GO994_12785 PF10509 Galactokinase galactose-binding signature GO994_12785 PF00288 GHMP kinases N terminal domain GO994_12795 PF02653 Branched-chain amino acid transport system / permease component GO994_12800 PF00005 ABC transporter GO994_12805 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GO994_12810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GO994_12815 PF00596 Class II Aldolase and Adducin N-terminal domain GO994_12820 PF11762 L-arabinose isomerase C-terminal domain GO994_12820 PF02610 L-arabinose isomerase GO994_12825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_12825 PF03466 LysR substrate binding domain GO994_12830 PF00155 Aminotransferase class I and II GO994_12835 PF00795 Carbon-nitrogen hydrolase GO994_12840 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_12850 PF00929 Exonuclease GO994_12850 PF08411 Exonuclease C-terminal GO994_12865 PF03788 LrgA family GO994_12870 PF04172 LrgB-like family GO994_12875 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GO994_12875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GO994_12880 PF00501 AMP-binding enzyme GO994_12885 PF08891 YfcL protein GO994_12895 PF03741 Integral membrane protein TerC family GO994_12900 PF00691 OmpA family GO994_12905 PF00990 Diguanylate cyclase, GGDEF domain GO994_12905 PF17152 Periplasmic sensor domain GO994_12910 PF13689 YfiR/HmsC-like GO994_12915 PF00158 Sigma-54 interaction domain GO994_12915 PF18024 Helix-turn-helix domain GO994_12920 PF01329 Pterin 4 alpha carbinolamine dehydratase GO994_12925 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GO994_12930 PF05128 Domain of unknown function (DUF697) GO994_12935 PF04317 YcjX-like family, DUF463 GO994_12945 PF06667 Phage shock protein B GO994_12950 PF04012 PspA/IM30 family GO994_12955 PF02954 Bacterial regulatory protein, Fis family GO994_12955 PF00158 Sigma-54 interaction domain GO994_12960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_12965 PF00528 Binding-protein-dependent transport system inner membrane component GO994_12970 PF12911 N-terminal TM domain of oligopeptide transport permease C GO994_12970 PF00528 Binding-protein-dependent transport system inner membrane component GO994_12975 PF00005 ABC transporter GO994_12975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO994_12980 PF00005 ABC transporter GO994_12985 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GO994_12990 PF00156 Phosphoribosyl transferase domain GO994_12995 PF02674 Colicin V production protein GO994_13000 PF02403 Seryl-tRNA synthetase N-terminal domain GO994_13000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GO994_13005 PF00004 ATPase family associated with various cellular activities (AAA) GO994_13005 PF16193 AAA C-terminal domain GO994_13005 PF12002 MgsA AAA+ ATPase C terminal GO994_13010 PF03548 Outer membrane lipoprotein carrier protein LolA GO994_13015 PF09397 Ftsk gamma domain GO994_13015 PF17854 FtsK alpha domain GO994_13015 PF01580 FtsK/SpoIIIE family GO994_13015 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GO994_13020 PF01037 Lrp/AsnC ligand binding domain GO994_13035 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_13045 PF05433 Glycine zipper 2TM domain GO994_13050 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GO994_13055 PF04376 Arginine-tRNA-protein transferase, N terminus GO994_13055 PF04377 Arginine-tRNA-protein transferase, C terminus GO994_13060 PF01176 Translation initiation factor 1A / IF-1 GO994_13065 PF10431 C-terminal, D2-small domain, of ClpB protein GO994_13065 PF02861 Clp amino terminal domain, pathogenicity island component GO994_13065 PF00004 ATPase family associated with various cellular activities (AAA) GO994_13065 PF07724 AAA domain (Cdc48 subfamily) GO994_13065 PF17871 AAA lid domain GO994_13070 PF02617 ATP-dependent Clp protease adaptor protein ClpS GO994_13075 PF00313 'Cold-shock' DNA-binding domain GO994_13080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO994_13080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO994_13140 PF02830 V4R domain GO994_13140 PF06505 Activator of aromatic catabolism GO994_13140 PF00158 Sigma-54 interaction domain GO994_13140 PF02954 Bacterial regulatory protein, Fis family GO994_13195 PF00916 Sulfate permease family GO994_13195 PF01740 STAS domain GO994_13225 PF00892 EamA-like transporter family GO994_13230 PF02508 Rnf-Nqr subunit, membrane protein GO994_13235 PF04060 Putative Fe-S cluster GO994_13240 PF10531 SLBB domain GO994_13240 PF12838 4Fe-4S dicluster domain GO994_13240 PF13375 RnfC Barrel sandwich hybrid domain GO994_13240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GO994_13245 PF03116 NQR2, RnfD, RnfE family GO994_13250 PF04205 FMN-binding domain GO994_13255 PF02508 Rnf-Nqr subunit, membrane protein GO994_13260 PF00730 HhH-GPD superfamily base excision DNA repair protein GO994_13260 PF00633 Helix-hairpin-helix motif GO994_13260 PF10576 Iron-sulfur binding domain of endonuclease III GO994_13265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GO994_13270 PF00691 OmpA family GO994_13270 PF18393 MotY N-terminal domain GO994_13275 PF00672 HAMP domain GO994_13275 PF12729 Four helix bundle sensory module for signal transduction GO994_13275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_13280 PF00929 Exonuclease GO994_13285 PF03553 Na+/H+ antiporter family GO994_13285 PF13726 Na+-H+ antiporter family GO994_13290 PF00872 Transposase, Mutator family GO994_13305 PF00271 Helicase conserved C-terminal domain GO994_13305 PF00270 DEAD/DEAH box helicase GO994_13305 PF03880 DbpA RNA binding domain GO994_13310 PF03061 Thioesterase superfamily GO994_13320 PF02913 FAD linked oxidases, C-terminal domain GO994_13320 PF01565 FAD binding domain GO994_13320 PF13183 4Fe-4S dicluster domain GO994_13330 PF03741 Integral membrane protein TerC family GO994_13330 PF03471 Transporter associated domain GO994_13335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GO994_13340 PF00962 Adenosine/AMP deaminase GO994_13345 PF13344 Haloacid dehalogenase-like hydrolase GO994_13350 PF02254 TrkA-N domain GO994_13350 PF00999 Sodium/hydrogen exchanger family GO994_13360 PF13537 Glutamine amidotransferase domain GO994_13360 PF00733 Asparagine synthase GO994_13365 PF03577 Peptidase family C69 GO994_13385 PF00043 Glutathione S-transferase, C-terminal domain GO994_13385 PF13417 Glutathione S-transferase, N-terminal domain GO994_13390 PF02798 Glutathione S-transferase, N-terminal domain GO994_13390 PF14497 Glutathione S-transferase, C-terminal domain GO994_13405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GO994_13415 PF00849 RNA pseudouridylate synthase GO994_13435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_13435 PF08447 PAS fold GO994_13445 PF01027 Inhibitor of apoptosis-promoting Bax1 GO994_13450 PF12805 FUSC-like inner membrane protein yccS GO994_13455 PF04358 DsrC like protein GO994_13460 PF05036 Sporulation related domain GO994_13465 PF02875 Mur ligase family, glutamate ligase domain GO994_13465 PF08245 Mur ligase middle domain GO994_13470 PF01039 Carboxyl transferase domain GO994_13470 PF17848 Acetyl-coA carboxylase zinc finger domain GO994_13475 PF01416 tRNA pseudouridine synthase GO994_13485 PF02774 Semialdehyde dehydrogenase, dimerisation domain GO994_13485 PF01118 Semialdehyde dehydrogenase, NAD binding domain GO994_13490 PF11890 Domain of unknown function (DUF3410) GO994_13490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO994_13490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO994_13495 PF01569 PAP2 superfamily GO994_13500 PF03180 NLPA lipoprotein GO994_13560 PF00082 Subtilase family GO994_13560 PF01483 Proprotein convertase P-domain GO994_13575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GO994_13575 PF02896 PEP-utilising enzyme, TIM barrel domain GO994_13575 PF00391 PEP-utilising enzyme, mobile domain GO994_13580 PF03618 Kinase/pyrophosphorylase GO994_13590 PF00324 Amino acid permease GO994_13620 PF03239 Iron permease FTR1 family GO994_13625 PF01593 Flavin containing amine oxidoreductase GO994_13645 PF07690 Major Facilitator Superfamily GO994_13650 PF03600 Citrate transporter GO994_13660 PF00005 ABC transporter GO994_13680 PF02308 MgtC family GO994_13735 PF01625 Peptide methionine sulfoxide reductase GO994_13740 PF00696 Amino acid kinase family GO994_13740 PF00583 Acetyltransferase (GNAT) family GO994_13755 PF00884 Sulfatase GO994_13780 PF01906 Putative heavy-metal-binding GO994_13785 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_13790 PF05728 Uncharacterised protein family (UPF0227) GO994_13795 PF13592 Winged helix-turn helix GO994_13795 PF13358 DDE superfamily endonuclease GO994_13815 PF00816 H-NS histone family GO994_13820 PF01923 Cobalamin adenosyltransferase GO994_13825 PF12843 Putative quorum-sensing-regulated virulence factor GO994_13830 PF04055 Radical SAM superfamily GO994_13835 PF06508 Queuosine biosynthesis protein QueC GO994_13850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GO994_13855 PF18073 Rubredoxin metal binding domain GO994_13865 PF00216 Bacterial DNA-binding protein GO994_13870 PF00575 S1 RNA binding domain GO994_13875 PF02224 Cytidylate kinase GO994_13880 PF00925 GTP cyclohydrolase II GO994_13885 PF03466 LysR substrate binding domain GO994_13885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_13890 PF03466 LysR substrate binding domain GO994_13890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_13895 PF07690 Major Facilitator Superfamily GO994_13910 PF00881 Nitroreductase family GO994_13915 PF00990 Diguanylate cyclase, GGDEF domain GO994_13915 PF00563 EAL domain GO994_13915 PF03707 Bacterial signalling protein N terminal repeat GO994_13915 PF13188 PAS domain GO994_13920 PF13358 DDE superfamily endonuclease GO994_13920 PF13592 Winged helix-turn helix GO994_13930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_13930 PF03466 LysR substrate binding domain GO994_13945 PF01212 Beta-eliminating lyase GO994_13950 PF00106 short chain dehydrogenase GO994_13960 PF00248 Aldo/keto reductase family GO994_13965 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GO994_13990 PF13742 OB-fold nucleic acid binding domain GO994_13990 PF02601 Exonuclease VII, large subunit GO994_13995 PF04055 Radical SAM superfamily GO994_14000 PF00672 HAMP domain GO994_14000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_14005 PF00793 DAHP synthetase I family GO994_14010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GO994_14015 PF00266 Aminotransferase class-V GO994_14020 PF01012 Electron transfer flavoprotein domain GO994_14020 PF00766 Electron transfer flavoprotein FAD-binding domain GO994_14025 PF01012 Electron transfer flavoprotein domain GO994_14040 PF01544 CorA-like Mg2+ transporter protein GO994_14045 PF11143 Protein of unknown function (DUF2919) GO994_14060 PF00593 TonB dependent receptor GO994_14060 PF07715 TonB-dependent Receptor Plug Domain GO994_14065 PF01032 FecCD transport family GO994_14070 PF01032 FecCD transport family GO994_14075 PF00005 ABC transporter GO994_14080 PF17837 4'-phosphopantetheinyl transferase N-terminal domain GO994_14080 PF01648 4'-phosphopantetheinyl transferase superfamily GO994_14085 PF01497 Periplasmic binding protein GO994_14090 PF16197 Ketoacyl-synthetase C-terminal extension GO994_14090 PF00668 Condensation domain GO994_14090 PF00109 Beta-ketoacyl synthase, N-terminal domain GO994_14090 PF00501 AMP-binding enzyme GO994_14090 PF02801 Beta-ketoacyl synthase, C-terminal domain GO994_14090 PF08659 KR domain GO994_14090 PF14765 Polyketide synthase dehydratase GO994_14090 PF00550 Phosphopantetheine attachment site GO994_14090 PF13193 AMP-binding enzyme C-terminal domain GO994_14095 PF07993 Male sterility protein GO994_14095 PF13193 AMP-binding enzyme C-terminal domain GO994_14095 PF00668 Condensation domain GO994_14095 PF00550 Phosphopantetheine attachment site GO994_14095 PF00501 AMP-binding enzyme GO994_14110 PF00857 Isochorismatase family GO994_14110 PF00550 Phosphopantetheine attachment site GO994_14115 PF13193 AMP-binding enzyme C-terminal domain GO994_14115 PF00501 AMP-binding enzyme GO994_14120 PF00425 chorismate binding enzyme GO994_14125 PF07273 Protein of unknown function (DUF1439) GO994_14140 PF00563 EAL domain GO994_14140 PF00990 Diguanylate cyclase, GGDEF domain GO994_14140 PF03707 Bacterial signalling protein N terminal repeat GO994_14155 PF17200 Single Cache domain 2 GO994_14155 PF00672 HAMP domain GO994_14155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_14160 PF00294 pfkB family carbohydrate kinase GO994_14165 PF01124 MAPEG family GO994_14170 PF00762 Ferrochelatase GO994_14175 PF05191 Adenylate kinase, active site lid GO994_14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_14185 PF00183 Hsp90 protein GO994_14190 PF13662 Toprim domain GO994_14190 PF02132 RecR protein GO994_14195 PF02634 FdhD/NarQ family GO994_14200 PF01590 GAF domain GO994_14200 PF00158 Sigma-54 interaction domain GO994_14200 PF02954 Bacterial regulatory protein, Fis family GO994_14210 PF01609 Transposase DDE domain GO994_14210 PF13808 DDE_Tnp_1-associated GO994_14230 PF02801 Beta-ketoacyl synthase, C-terminal domain GO994_14230 PF00550 Phosphopantetheine attachment site GO994_14230 PF00109 Beta-ketoacyl synthase, N-terminal domain GO994_14230 PF16197 Ketoacyl-synthetase C-terminal extension GO994_14230 PF00668 Condensation domain GO994_14230 PF00698 Acyl transferase domain GO994_14235 PF01609 Transposase DDE domain GO994_14235 PF13808 DDE_Tnp_1-associated GO994_14240 PF02801 Beta-ketoacyl synthase, C-terminal domain GO994_14240 PF14765 Polyketide synthase dehydratase GO994_14240 PF00550 Phosphopantetheine attachment site GO994_14240 PF08659 KR domain GO994_14240 PF00109 Beta-ketoacyl synthase, N-terminal domain GO994_14240 PF13193 AMP-binding enzyme C-terminal domain GO994_14240 PF00668 Condensation domain GO994_14240 PF00501 AMP-binding enzyme GO994_14240 PF16197 Ketoacyl-synthetase C-terminal extension GO994_14255 PF13193 AMP-binding enzyme C-terminal domain GO994_14255 PF00975 Thioesterase domain GO994_14255 PF00550 Phosphopantetheine attachment site GO994_14255 PF00668 Condensation domain GO994_14255 PF00501 AMP-binding enzyme GO994_14270 PF00884 Sulfatase GO994_14270 PF08019 Phosphoethanolamine transferase EptA/EptB GO994_14275 PF01709 Transcriptional regulator GO994_14280 PF02938 GAD domain GO994_14280 PF00152 tRNA synthetases class II (D, K and N) GO994_14280 PF01336 OB-fold nucleic acid binding domain GO994_14300 PF13649 Methyltransferase domain GO994_14305 PF08003 Protein of unknown function (DUF1698) GO994_14325 PF10417 C-terminal domain of 1-Cys peroxiredoxin GO994_14325 PF00578 AhpC/TSA family GO994_14330 PF13808 DDE_Tnp_1-associated GO994_14330 PF01609 Transposase DDE domain GO994_14335 PF13592 Winged helix-turn helix GO994_14335 PF13358 DDE superfamily endonuclease GO994_14340 PF04344 Chemotaxis phosphatase, CheZ GO994_14345 PF00072 Response regulator receiver domain GO994_14350 PF04545 Sigma-70, region 4 GO994_14350 PF04539 Sigma-70 region 3 GO994_14350 PF04542 Sigma-70 region 2 GO994_14355 PF10609 NUBPL iron-transfer P-loop NTPase GO994_14360 PF00448 SRP54-type protein, GTPase domain GO994_14365 PF00771 FHIPEP family GO994_14370 PF01312 FlhB HrpN YscU SpaS Family GO994_14375 PF01311 Bacterial export proteins, family 1 GO994_14380 PF01313 Bacterial export proteins, family 3 GO994_14385 PF00813 FliP family GO994_14390 PF04347 Flagellar biosynthesis protein, FliO GO994_14395 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GO994_14400 PF02154 Flagellar motor switch protein FliM GO994_14400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GO994_14430 PF14842 FliG N-terminal domain GO994_14430 PF14841 FliG middle domain GO994_14430 PF01706 FliG C-terminal domain GO994_14435 PF01514 Secretory protein of YscJ/FliF family GO994_14435 PF08345 Flagellar M-ring protein C-terminal GO994_14440 PF02049 Flagellar hook-basal body complex protein FliE GO994_14450 PF07969 Amidohydrolase family GO994_14465 PF02001 Protein of unknown function DUF134 GO994_14480 PF00072 Response regulator receiver domain GO994_14485 PF04055 Radical SAM superfamily GO994_14485 PF18693 TRAM domain GO994_14485 PF00919 Uncharacterized protein family UPF0004 GO994_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_14500 PF17203 Single cache domain 3 GO994_14500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GO994_14500 PF00989 PAS fold GO994_14505 PF02685 Glucokinase GO994_14510 PF01380 SIS domain GO994_14510 PF01418 Helix-turn-helix domain, rpiR family GO994_14515 PF00224 Pyruvate kinase, barrel domain GO994_14515 PF02887 Pyruvate kinase, alpha/beta domain GO994_14525 PF00873 AcrB/AcrD/AcrF family GO994_14530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GO994_14530 PF02770 Acyl-CoA dehydrogenase, middle domain GO994_14530 PF09317 Domain of unknown function (DUF1974) GO994_14530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GO994_14535 PF00440 Bacterial regulatory proteins, tetR family GO994_14545 PF01609 Transposase DDE domain GO994_14545 PF13808 DDE_Tnp_1-associated GO994_14555 PF13808 DDE_Tnp_1-associated GO994_14555 PF01609 Transposase DDE domain GO994_14575 PF01406 tRNA synthetases class I (C) catalytic domain GO994_14575 PF09190 DALR domain GO994_14580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GO994_14590 PF00149 Calcineurin-like phosphoesterase GO994_14595 PF04226 Transglycosylase associated protein GO994_14610 PF03466 LysR substrate binding domain GO994_14610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_14630 PF01066 CDP-alcohol phosphatidyltransferase GO994_14635 PF08459 UvrC Helix-hairpin-helix N-terminal GO994_14635 PF02151 UvrB/uvrC motif GO994_14635 PF01541 GIY-YIG catalytic domain GO994_14640 PF00072 Response regulator receiver domain GO994_14640 PF00196 Bacterial regulatory proteins, luxR family GO994_14645 PF02348 Cytidylyltransferase GO994_14650 PF03966 Trm112p-like protein GO994_14655 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GO994_14660 PF00664 ABC transporter transmembrane region GO994_14660 PF00005 ABC transporter GO994_14665 PF03772 Competence protein GO994_14665 PF00753 Metallo-beta-lactamase superfamily GO994_14680 PF05872 Bacterial protein of unknown function (DUF853) GO994_14685 PF00155 Aminotransferase class I and II GO994_14700 PF13609 Gram-negative porin GO994_14705 PF13307 Helicase C-terminal domain GO994_14705 PF06733 DEAD_2 GO994_14715 PF00850 Histone deacetylase domain GO994_14720 PF01926 50S ribosome-binding GTPase GO994_14725 PF00245 Alkaline phosphatase GO994_14730 PF00245 Alkaline phosphatase GO994_14745 PF01272 Transcription elongation factor, GreA/GreB, C-term GO994_14745 PF14760 Rnk N-terminus GO994_14750 PF00196 Bacterial regulatory proteins, luxR family GO994_14750 PF00072 Response regulator receiver domain GO994_14755 PF05231 MASE1 GO994_14755 PF07730 Histidine kinase GO994_14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_14760 PF07690 Major Facilitator Superfamily GO994_14765 PF00990 Diguanylate cyclase, GGDEF domain GO994_14765 PF08448 PAS fold GO994_14770 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_14775 PF00528 Binding-protein-dependent transport system inner membrane component GO994_14780 PF00005 ABC transporter GO994_14785 PF04116 Fatty acid hydroxylase superfamily GO994_14790 PF13520 Amino acid permease GO994_14805 PF03471 Transporter associated domain GO994_14805 PF01595 Cyclin M transmembrane N-terminal domain GO994_14805 PF00571 CBS domain GO994_14810 PF01895 PhoU domain GO994_14820 PF00528 Binding-protein-dependent transport system inner membrane component GO994_14825 PF00528 Binding-protein-dependent transport system inner membrane component GO994_14830 PF14437 MafB19-like deaminase GO994_14840 PF01274 Malate synthase GO994_14845 PF00463 Isocitrate lyase family GO994_14850 PF00308 Bacterial dnaA protein GO994_14865 PF02769 AIR synthase related protein, C-terminal domain GO994_14865 PF00586 AIR synthase related protein, N-terminal domain GO994_14870 PF00551 Formyl transferase GO994_14875 PF01784 NIF3 (NGG1p interacting factor 3) GO994_14880 PF00158 Sigma-54 interaction domain GO994_14880 PF02954 Bacterial regulatory protein, Fis family GO994_14885 PF00989 PAS fold GO994_14885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_14885 PF00512 His Kinase A (phospho-acceptor) domain GO994_14890 PF02954 Bacterial regulatory protein, Fis family GO994_14890 PF00072 Response regulator receiver domain GO994_14890 PF00158 Sigma-54 interaction domain GO994_14905 PF02503 Polyphosphate kinase middle domain GO994_14905 PF17941 Polyphosphate kinase C-terminal domain 1 GO994_14905 PF13089 Polyphosphate kinase N-terminal domain GO994_14905 PF13090 Polyphosphate kinase C-terminal domain 2 GO994_14910 PF02541 Ppx/GppA phosphatase family GO994_14915 PF01769 Divalent cation transporter GO994_14915 PF03448 MgtE intracellular N domain GO994_14915 PF00571 CBS domain GO994_14955 PF12850 Calcineurin-like phosphoesterase superfamily domain GO994_14960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_14970 PF01479 S4 domain GO994_14970 PF00849 RNA pseudouridylate synthase GO994_14975 PF01966 HD domain GO994_14975 PF11871 Domain of unknown function (DUF3391) GO994_14990 PF00892 EamA-like transporter family GO994_15020 PF00313 'Cold-shock' DNA-binding domain GO994_15025 PF00364 Biotin-requiring enzyme GO994_15025 PF02817 e3 binding domain GO994_15025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GO994_15040 PF13592 Winged helix-turn helix GO994_15040 PF13358 DDE superfamily endonuclease GO994_15045 PF02779 Transketolase, pyrimidine binding domain GO994_15045 PF02780 Transketolase, C-terminal domain GO994_15050 PF00676 Dehydrogenase E1 component GO994_15055 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GO994_15065 PF05472 DNA replication terminus site-binding protein (Ter protein) GO994_15070 PF04434 SWIM zinc finger GO994_15070 PF00271 Helicase conserved C-terminal domain GO994_15070 PF00176 SNF2 family N-terminal domain GO994_15075 PF04337 Protein of unknown function, DUF480 GO994_15085 PF02397 Bacterial sugar transferase GO994_15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_15115 PF03466 LysR substrate binding domain GO994_15120 PF02447 GntP family permease GO994_15125 PF00291 Pyridoxal-phosphate dependent enzyme GO994_15135 PF00180 Isocitrate/isopropylmalate dehydrogenase GO994_15140 PF12833 Helix-turn-helix domain GO994_15145 PF01238 Phosphomannose isomerase type I GO994_15185 PF01609 Transposase DDE domain GO994_15185 PF13808 DDE_Tnp_1-associated GO994_15215 PF13533 Biotin-lipoyl like GO994_15220 PF05230 MASE2 domain GO994_15220 PF00990 Diguanylate cyclase, GGDEF domain GO994_15225 PF01734 Patatin-like phospholipase GO994_15230 PF00209 Sodium:neurotransmitter symporter family GO994_15245 PF00691 OmpA family GO994_15245 PF01389 OmpA-like transmembrane domain GO994_15250 PF00691 OmpA family GO994_15250 PF01389 OmpA-like transmembrane domain GO994_15255 PF01389 OmpA-like transmembrane domain GO994_15255 PF00691 OmpA family GO994_15260 PF00390 Malic enzyme, N-terminal domain GO994_15260 PF03949 Malic enzyme, NAD binding domain GO994_15265 PF12833 Helix-turn-helix domain GO994_15275 PF10692 Protein of unknown function (DUF2498) GO994_15280 PF00990 Diguanylate cyclase, GGDEF domain GO994_15280 PF00072 Response regulator receiver domain GO994_15285 PF00860 Permease family GO994_15295 PF01235 Sodium:alanine symporter family GO994_15300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GO994_15300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GO994_15305 PF01699 Sodium/calcium exchanger protein GO994_15310 PF08534 Redoxin GO994_15310 PF00462 Glutaredoxin GO994_15320 PF00293 NUDIX domain GO994_15340 PF00005 ABC transporter GO994_15345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO994_15345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GO994_15350 PF03932 CutC family GO994_15355 PF00480 ROK family GO994_15365 PF01435 Peptidase family M48 GO994_15370 PF12849 PBP superfamily domain GO994_15375 PF11808 Phosphate regulon sensor protein PhoR GO994_15375 PF00989 PAS fold GO994_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_15375 PF00512 His Kinase A (phospho-acceptor) domain GO994_15380 PF00486 Transcriptional regulatory protein, C terminal GO994_15380 PF00072 Response regulator receiver domain GO994_15385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GO994_15390 PF07694 5TMR of 5TMR-LYT GO994_15390 PF00990 Diguanylate cyclase, GGDEF domain GO994_15395 PF00158 Sigma-54 interaction domain GO994_15395 PF01590 GAF domain GO994_15395 PF02954 Bacterial regulatory protein, Fis family GO994_15400 PF00171 Aldehyde dehydrogenase family GO994_15405 PF01361 Tautomerase enzyme GO994_15410 PF12697 Alpha/beta hydrolase family GO994_15420 PF03466 LysR substrate binding domain GO994_15420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_15430 PF00892 EamA-like transporter family GO994_15440 PF00248 Aldo/keto reductase family GO994_15450 PF12431 Transcriptional regulator GO994_15450 PF00072 Response regulator receiver domain GO994_15455 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GO994_15455 PF17203 Single cache domain 3 GO994_15455 PF00989 PAS fold GO994_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_15460 PF03949 Malic enzyme, NAD binding domain GO994_15460 PF00390 Malic enzyme, N-terminal domain GO994_15515 PF10282 Lactonase, 7-bladed beta-propeller GO994_15525 PF12729 Four helix bundle sensory module for signal transduction GO994_15525 PF00672 HAMP domain GO994_15525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_15530 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_15535 PF00860 Permease family GO994_15540 PF00390 Malic enzyme, N-terminal domain GO994_15540 PF03949 Malic enzyme, NAD binding domain GO994_15555 PF13247 4Fe-4S dicluster domain GO994_15560 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GO994_15560 PF01568 Molydopterin dinucleotide binding domain GO994_15560 PF00384 Molybdopterin oxidoreductase GO994_15560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO994_15560 PF12838 4Fe-4S dicluster domain GO994_15605 PF13808 DDE_Tnp_1-associated GO994_15605 PF01609 Transposase DDE domain GO994_15620 PF02719 Polysaccharide biosynthesis protein GO994_15625 PF00953 Glycosyl transferase family 4 GO994_15630 PF01370 NAD dependent epimerase/dehydratase family GO994_15670 PF02080 TrkA-C domain GO994_15670 PF03600 Citrate transporter GO994_15690 PF02350 UDP-N-acetylglucosamine 2-epimerase GO994_15705 PF00005 ABC transporter GO994_15715 PF03958 Bacterial type II/III secretion system short domain GO994_15715 PF00263 Bacterial type II and III secretion system protein GO994_15750 PF08334 Type II secretion system (T2SS), protein G GO994_15750 PF07963 Prokaryotic N-terminal methylation motif GO994_15755 PF00482 Type II secretion system (T2SS), protein F GO994_15760 PF00437 Type II/IV secretion system protein GO994_15760 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GO994_15770 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GO994_15775 PF00483 Nucleotidyl transferase GO994_15780 PF04321 RmlD substrate binding domain GO994_15785 PF16363 GDP-mannose 4,6 dehydratase GO994_15790 PF02321 Outer membrane efflux protein GO994_15800 PF00529 HlyD membrane-fusion protein of T1SS GO994_15800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_15805 PF08361 MAATS-type transcriptional repressor, C-terminal region GO994_15805 PF00440 Bacterial regulatory proteins, tetR family GO994_15825 PF01479 S4 domain GO994_15825 PF00849 RNA pseudouridylate synthase GO994_15830 PF04079 Segregation and condensation complex subunit ScpB GO994_15835 PF02616 Segregation and condensation protein ScpA GO994_15840 PF01300 Telomere recombination GO994_15845 PF02811 PHP domain GO994_15855 PF04715 Anthranilate synthase component I, N terminal region GO994_15855 PF00425 chorismate binding enzyme GO994_15860 PF00117 Glutamine amidotransferase class-I GO994_15860 PF02885 Glycosyl transferase family, helical bundle domain GO994_15860 PF00591 Glycosyl transferase family, a/b domain GO994_15865 PF00591 Glycosyl transferase family, a/b domain GO994_15865 PF02885 Glycosyl transferase family, helical bundle domain GO994_15870 PF00218 Indole-3-glycerol phosphate synthase GO994_15870 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GO994_15875 PF00291 Pyridoxal-phosphate dependent enzyme GO994_15905 PF17969 L,D-transpeptidase C-terminal domain GO994_15905 PF03734 L,D-transpeptidase catalytic domain GO994_15905 PF01476 LysM domain GO994_15915 PF01575 MaoC like domain GO994_15920 PF05971 RNA methyltransferase GO994_15925 PF00877 NlpC/P60 family GO994_15930 PF01648 4'-phosphopantetheinyl transferase superfamily GO994_15945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GO994_15950 PF00551 Formyl transferase GO994_15950 PF01842 ACT domain GO994_15960 PF13091 PLD-like domain GO994_15960 PF13396 Phospholipase_D-nuclease N-terminal GO994_15975 PF01551 Peptidase family M23 GO994_15980 PF00128 Alpha amylase, catalytic domain GO994_15985 PF01464 Transglycosylase SLT domain GO994_15985 PF10145 Phage-related minor tail protein GO994_15985 PF01551 Peptidase family M23 GO994_15990 PF00230 Major intrinsic protein GO994_15995 PF02075 Crossover junction endodeoxyribonuclease RuvC GO994_16000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GO994_16030 PF07690 Major Facilitator Superfamily GO994_16035 PF01040 UbiA prenyltransferase family GO994_16045 PF00115 Cytochrome C and Quinol oxidase polypeptide I GO994_16050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GO994_16050 PF06481 COX Aromatic Rich Motif GO994_16060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GO994_16060 PF00034 Cytochrome c GO994_16070 PF01156 Inosine-uridine preferring nucleoside hydrolase GO994_16085 PF00127 Copper binding proteins, plastocyanin/azurin family GO994_16090 PF02424 ApbE family GO994_16095 PF00486 Transcriptional regulatory protein, C terminal GO994_16095 PF00072 Response regulator receiver domain GO994_16115 PF03372 Endonuclease/Exonuclease/phosphatase family GO994_16120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_16125 PF00873 AcrB/AcrD/AcrF family GO994_16140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_16140 PF00529 HlyD membrane-fusion protein of T1SS GO994_16145 PF00873 AcrB/AcrD/AcrF family GO994_16155 PF03099 Biotin/lipoate A/B protein ligase family GO994_16155 PF10437 Bacterial lipoate protein ligase C-terminus GO994_16160 PF00990 Diguanylate cyclase, GGDEF domain GO994_16160 PF03707 Bacterial signalling protein N terminal repeat GO994_16160 PF00563 EAL domain GO994_16165 PF00873 AcrB/AcrD/AcrF family GO994_16180 PF04143 Sulphur transport GO994_16200 PF02308 MgtC family GO994_16205 PF00356 Bacterial regulatory proteins, lacI family GO994_16205 PF13407 Periplasmic binding protein domain GO994_16210 PF08244 Glycosyl hydrolases family 32 C terminal GO994_16210 PF00251 Glycosyl hydrolases family 32 N-terminal domain GO994_16215 PF02378 Phosphotransferase system, EIIC GO994_16215 PF00367 phosphotransferase system, EIIB GO994_16220 PF00294 pfkB family carbohydrate kinase GO994_16225 PF11471 Maltoporin periplasmic N-terminal extension GO994_16225 PF02264 LamB porin GO994_16230 PF00226 DnaJ domain GO994_16230 PF01556 DnaJ C terminal domain GO994_16230 PF00684 DnaJ central domain GO994_16235 PF00012 Hsp70 protein GO994_16240 PF01025 GrpE GO994_16245 PF01513 ATP-NAD kinase GO994_16250 PF02463 RecF/RecN/SMC N terminal domain GO994_16255 PF02833 DHHA2 domain GO994_16255 PF01368 DHH family GO994_16265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_16270 PF00005 ABC transporter GO994_16270 PF12704 MacB-like periplasmic core domain GO994_16270 PF02687 FtsX-like permease family GO994_16275 PF02321 Outer membrane efflux protein GO994_16280 PF04954 Siderophore-interacting protein GO994_16280 PF08021 Siderophore-interacting FAD-binding domain GO994_16285 PF00793 DAHP synthetase I family GO994_16295 PF00872 Transposase, Mutator family GO994_16300 PF00816 H-NS histone family GO994_16335 PF07883 Cupin domain GO994_16335 PF12833 Helix-turn-helix domain GO994_16355 PF07883 Cupin domain GO994_16355 PF01381 Helix-turn-helix GO994_16365 PF00202 Aminotransferase class-III GO994_16370 PF00324 Amino acid permease GO994_16375 PF00324 Amino acid permease GO994_16380 PF02690 Na+/Pi-cotransporter GO994_16385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO994_16385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GO994_16390 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GO994_16405 PF01048 Phosphorylase superfamily GO994_16425 PF13358 DDE superfamily endonuclease GO994_16425 PF13592 Winged helix-turn helix GO994_16430 PF14821 Threonine synthase N terminus GO994_16430 PF00291 Pyridoxal-phosphate dependent enzyme GO994_16435 PF00288 GHMP kinases N terminal domain GO994_16435 PF08544 GHMP kinases C terminal GO994_16440 PF00696 Amino acid kinase family GO994_16440 PF03447 Homoserine dehydrogenase, NAD binding domain GO994_16440 PF01842 ACT domain GO994_16440 PF13840 ACT domain GO994_16440 PF00742 Homoserine dehydrogenase GO994_16450 PF00588 SpoU rRNA Methylase family GO994_16455 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) GO994_16470 PF03737 Aldolase/RraA GO994_16480 PF00486 Transcriptional regulatory protein, C terminal GO994_16480 PF00072 Response regulator receiver domain GO994_16495 PF00005 ABC transporter GO994_16495 PF00664 ABC transporter transmembrane region GO994_16500 PF00005 ABC transporter GO994_16500 PF00664 ABC transporter transmembrane region GO994_16520 PF18389 TrmO C-terminal domain GO994_16520 PF01980 tRNA-methyltransferase O GO994_16525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO994_16525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GO994_16540 PF00291 Pyridoxal-phosphate dependent enzyme GO994_16545 PF00381 PTS HPr component phosphorylation site GO994_16550 PF05524 PEP-utilising enzyme, N-terminal GO994_16550 PF02896 PEP-utilising enzyme, TIM barrel domain GO994_16550 PF00391 PEP-utilising enzyme, mobile domain GO994_16555 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GO994_16560 PF00990 Diguanylate cyclase, GGDEF domain GO994_16560 PF08448 PAS fold GO994_16570 PF01292 Prokaryotic cytochrome b561 GO994_16580 PF13476 AAA domain GO994_16585 PF12320 Type 5 capsule protein repressor C-terminal domain GO994_16585 PF00149 Calcineurin-like phosphoesterase GO994_16595 PF04381 Putative exonuclease, RdgC GO994_16605 PF02254 TrkA-N domain GO994_16605 PF00999 Sodium/hydrogen exchanger family GO994_16610 PF00999 Sodium/hydrogen exchanger family GO994_16610 PF02254 TrkA-N domain GO994_16615 PF04151 Bacterial pre-peptidase C-terminal domain GO994_16615 PF04389 Peptidase family M28 GO994_16625 PF00224 Pyruvate kinase, barrel domain GO994_16625 PF02887 Pyruvate kinase, alpha/beta domain GO994_16630 PF12794 Mechanosensitive ion channel inner membrane domain 1 GO994_16630 PF12795 Mechanosensitive ion channel porin domain GO994_16630 PF00924 Mechanosensitive ion channel GO994_16635 PF13356 Arm DNA-binding domain GO994_16635 PF00589 Phage integrase family GO994_16660 PF01047 MarR family GO994_16665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO994_16665 PF00529 HlyD membrane-fusion protein of T1SS GO994_16685 PF01679 Proteolipid membrane potential modulator GO994_16700 PF03477 ATP cone domain GO994_16700 PF13597 Anaerobic ribonucleoside-triphosphate reductase GO994_16710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GO994_16710 PF01653 NAD-dependent DNA ligase adenylation domain GO994_16710 PF00533 BRCA1 C Terminus (BRCT) domain GO994_16710 PF12826 Helix-hairpin-helix motif GO994_16710 PF03120 NAD-dependent DNA ligase OB-fold domain GO994_16715 PF04354 ZipA, C-terminal FtsZ-binding domain GO994_16720 PF06470 SMC proteins Flexible Hinge Domain GO994_16720 PF02463 RecF/RecN/SMC N terminal domain GO994_16730 PF03458 UPF0126 domain GO994_16740 PF05951 Bacterial protein of unknown function (DUF882) GO994_16745 PF03734 L,D-transpeptidase catalytic domain GO994_16745 PF01471 Putative peptidoglycan binding domain GO994_16755 PF01609 Transposase DDE domain GO994_16755 PF13808 DDE_Tnp_1-associated GO994_16765 PF00535 Glycosyl transferase family 2 GO994_16780 PF00579 tRNA synthetases class I (W and Y) GO994_16785 PF01476 LysM domain GO994_16785 PF08525 Opacity-associated protein A N-terminal motif GO994_16785 PF01551 Peptidase family M23 GO994_16790 PF03702 Anhydro-N-acetylmuramic acid kinase GO994_16795 PF13808 DDE_Tnp_1-associated GO994_16795 PF01609 Transposase DDE domain GO994_16825 PF02779 Transketolase, pyrimidine binding domain GO994_16825 PF02780 Transketolase, C-terminal domain GO994_16825 PF00456 Transketolase, thiamine diphosphate binding domain GO994_16830 PF00438 S-adenosylmethionine synthetase, N-terminal domain GO994_16830 PF02772 S-adenosylmethionine synthetase, central domain GO994_16830 PF02773 S-adenosylmethionine synthetase, C-terminal domain GO994_16835 PF10263 SprT-like family GO994_16835 PF17283 SprT-like zinc ribbon domain GO994_16840 PF04231 Endonuclease I GO994_16845 PF04452 RNA methyltransferase GO994_16850 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GO994_16850 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GO994_16855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_16855 PF12729 Four helix bundle sensory module for signal transduction GO994_16855 PF00672 HAMP domain GO994_16865 PF02622 Uncharacterized ACR, COG1678 GO994_16870 PF03652 Holliday junction resolvase GO994_16875 PF03466 LysR substrate binding domain GO994_16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_16880 PF07690 Major Facilitator Superfamily GO994_16900 PF17863 AAA lid domain GO994_16900 PF07726 ATPase family associated with various cellular activities (AAA) GO994_16915 PF01235 Sodium:alanine symporter family GO994_16920 PF13808 DDE_Tnp_1-associated GO994_16920 PF01609 Transposase DDE domain GO994_16925 PF00923 Transaldolase/Fructose-6-phosphate aldolase GO994_16940 PF03167 Uracil DNA glycosylase superfamily GO994_16950 PF13358 DDE superfamily endonuclease GO994_16950 PF13592 Winged helix-turn helix GO994_16955 PF01228 Glycine radical GO994_16960 PF00375 Sodium:dicarboxylate symporter family GO994_16965 PF00793 DAHP synthetase I family GO994_16970 PF13369 Transglutaminase-like superfamily GO994_16980 PF17827 PrmC N-terminal domain GO994_16980 PF13847 Methyltransferase domain GO994_16985 PF00472 RF-1 domain GO994_16985 PF03462 PCRF domain GO994_16990 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GO994_16990 PF01488 Shikimate / quinate 5-dehydrogenase GO994_16990 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GO994_16995 PF03550 Outer membrane lipoprotein LolB GO994_17000 PF08544 GHMP kinases C terminal GO994_17000 PF00288 GHMP kinases N terminal domain GO994_17010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GO994_17010 PF14572 Phosphoribosyl synthetase-associated domain GO994_17015 PF02872 5'-nucleotidase, C-terminal domain GO994_17015 PF00149 Calcineurin-like phosphoesterase GO994_17020 PF01195 Peptidyl-tRNA hydrolase GO994_17025 PF01926 50S ribosome-binding GTPase GO994_17025 PF06071 Protein of unknown function (DUF933) GO994_17070 PF02080 TrkA-C domain GO994_17070 PF03600 Citrate transporter GO994_17075 PF04973 Nicotinamide mononucleotide transporter GO994_17080 PF01048 Phosphorylase superfamily GO994_17095 PF07859 alpha/beta hydrolase fold GO994_17115 PF00535 Glycosyl transferase family 2 GO994_17130 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GO994_17135 PF00892 EamA-like transporter family GO994_17145 PF00485 Phosphoribulokinase / Uridine kinase family GO994_17160 PF02566 OsmC-like protein GO994_17165 PF00027 Cyclic nucleotide-binding domain GO994_17165 PF13545 Crp-like helix-turn-helix domain GO994_17170 PF08241 Methyltransferase domain GO994_17175 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GO994_17175 PF18416 N-acetylglucosamine binding protein domain 2 GO994_17180 PF12561 ToxR activated gene A lipoprotein domain GO994_17180 PF17945 Beta/Gamma crystallin GO994_17190 PF00989 PAS fold GO994_17190 PF00512 His Kinase A (phospho-acceptor) domain GO994_17190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_17200 PF13443 Cro/C1-type HTH DNA-binding domain GO994_17210 PF12832 MFS_1 like family GO994_17215 PF07715 TonB-dependent Receptor Plug Domain GO994_17215 PF00593 TonB dependent receptor GO994_17235 PF01243 Pyridoxamine 5'-phosphate oxidase GO994_17240 PF06228 Haem utilisation ChuX/HutX GO994_17250 PF01032 FecCD transport family GO994_17255 PF00005 ABC transporter GO994_17265 PF01370 NAD dependent epimerase/dehydratase family GO994_17275 PF12848 ABC transporter GO994_17275 PF00005 ABC transporter GO994_17285 PF00860 Permease family GO994_17290 PF05099 Tellurite resistance protein TerB GO994_17290 PF00226 DnaJ domain GO994_17295 PF00483 Nucleotidyl transferase GO994_17300 PF01636 Phosphotransferase enzyme family GO994_17305 PF03968 OstA-like protein GO994_17305 PF04453 LPS transport system D GO994_17310 PF09312 SurA N-terminal domain GO994_17310 PF00639 PPIC-type PPIASE domain GO994_17315 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GO994_17320 PF00398 Ribosomal RNA adenine dimethylase GO994_17325 PF04379 ApaG domain GO994_17330 PF00149 Calcineurin-like phosphoesterase GO994_17345 PF00296 Luciferase-like monooxygenase GO994_17365 PF13193 AMP-binding enzyme C-terminal domain GO994_17365 PF00501 AMP-binding enzyme GO994_17375 PF01018 GTP1/OBG GO994_17375 PF01926 50S ribosome-binding GTPase GO994_17380 PF01016 Ribosomal L27 protein GO994_17385 PF00829 Ribosomal prokaryotic L21 protein GO994_17390 PF00348 Polyprenyl synthetase GO994_17395 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GO994_17400 PF01145 SPFH domain / Band 7 family GO994_17405 PF01145 SPFH domain / Band 7 family GO994_17405 PF12221 Bacterial membrane protein N terminal GO994_17410 PF13167 GTP-binding GTPase N-terminal GO994_17410 PF16360 GTP-binding GTPase Middle Region GO994_17410 PF01926 50S ribosome-binding GTPase GO994_17415 PF17209 Hfq protein GO994_17425 PF01119 DNA mismatch repair protein, C-terminal domain GO994_17425 PF08676 MutL C terminal dimerisation domain GO994_17430 PF01520 N-acetylmuramoyl-L-alanine amidase GO994_17435 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GO994_17440 PF01256 Carbohydrate kinase GO994_17440 PF03853 YjeF-related protein N-terminus GO994_17445 PF08331 Domain of unknown function (DUF1730) GO994_17450 PF00480 ROK family GO994_17460 PF00005 ABC transporter GO994_17460 PF09383 NIL domain GO994_17465 PF00528 Binding-protein-dependent transport system inner membrane component GO994_17470 PF03180 NLPA lipoprotein GO994_17475 PF02357 Transcription termination factor nusG GO994_17485 PF00990 Diguanylate cyclase, GGDEF domain GO994_17485 PF00563 EAL domain GO994_17485 PF03707 Bacterial signalling protein N terminal repeat GO994_17500 PF01966 HD domain GO994_17505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_17505 PF00072 Response regulator receiver domain GO994_17505 PF00989 PAS fold GO994_17505 PF01627 Hpt domain GO994_17505 PF00512 His Kinase A (phospho-acceptor) domain GO994_17505 PF18415 Histidine kinase receptor ArcB trans-membrane domain GO994_17530 PF03466 LysR substrate binding domain GO994_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_17540 PF01259 SAICAR synthetase GO994_17545 PF06804 NlpB/DapX lipoprotein GO994_17550 PF00701 Dihydrodipicolinate synthetase family GO994_17555 PF01842 ACT domain GO994_17560 PF00578 AhpC/TSA family GO994_17565 PF03887 YfbU domain GO994_17570 PF04217 Protein of unknown function, DUF412 GO994_17575 PF00871 Acetokinase family GO994_17580 PF01515 Phosphate acetyl/butaryl transferase GO994_17580 PF07085 DRTGG domain GO994_17585 PF10369 Small subunit of acetolactate synthase GO994_17590 PF00205 Thiamine pyrophosphate enzyme, central domain GO994_17590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO994_17590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO994_17605 PF01569 PAP2 superfamily GO994_17615 PF08502 LeuA allosteric (dimerisation) domain GO994_17615 PF00682 HMGL-like GO994_17620 PF00180 Isocitrate/isopropylmalate dehydrogenase GO994_17625 PF00330 Aconitase family (aconitate hydratase) GO994_17630 PF00694 Aconitase C-terminal domain GO994_17650 PF00528 Binding-protein-dependent transport system inner membrane component GO994_17655 PF00005 ABC transporter GO994_17660 PF13638 PIN domain GO994_17660 PF02562 PhoH-like protein GO994_17670 PF02867 Ribonucleotide reductase, barrel domain GO994_17670 PF00317 Ribonucleotide reductase, all-alpha domain GO994_17670 PF08343 Ribonucleotide reductase N-terminal GO994_17700 PF01521 Iron-sulphur cluster biosynthesis GO994_17710 PF00654 Voltage gated chloride channel GO994_17715 PF00202 Aminotransferase class-III GO994_17730 PF01569 PAP2 superfamily GO994_17740 PF11849 Domain of unknown function (DUF3369) GO994_17745 PF03466 LysR substrate binding domain GO994_17745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_17750 PF00893 Small Multidrug Resistance protein GO994_17755 PF00893 Small Multidrug Resistance protein GO994_17760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GO994_17765 PF00912 Transglycosylase GO994_17765 PF14814 Bifunctional transglycosylase second domain GO994_17765 PF00905 Penicillin binding protein transpeptidase domain GO994_17770 PF00271 Helicase conserved C-terminal domain GO994_17770 PF08482 ATP-dependent helicase C-terminal GO994_17770 PF00270 DEAD/DEAH box helicase GO994_17770 PF04408 Helicase associated domain (HA2) GO994_17780 PF17746 SfsA N-terminal OB domain GO994_17780 PF03749 Sugar fermentation stimulation protein RE domain GO994_17785 PF01258 Prokaryotic dksA/traR C4-type zinc finger GO994_17790 PF00749 tRNA synthetases class I (E and Q), catalytic domain GO994_17795 PF01743 Poly A polymerase head domain GO994_17795 PF12627 Probable RNA and SrmB- binding site of polymerase A GO994_17795 PF12626 Polymerase A arginine-rich C-terminus GO994_17800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GO994_17805 PF02548 Ketopantoate hydroxymethyltransferase GO994_17810 PF02569 Pantoate-beta-alanine ligase GO994_17820 PF01061 ABC-2 type transporter GO994_17825 PF00005 ABC transporter GO994_17830 PF00156 Phosphoribosyl transferase domain GO994_17835 PF00440 Bacterial regulatory proteins, tetR family GO994_17840 PF02441 Flavoprotein GO994_17845 PF01225 Mur ligase family, catalytic domain GO994_17845 PF08245 Mur ligase middle domain GO994_17845 PF02875 Mur ligase family, glutamate ligase domain GO994_17850 PF00719 Inorganic pyrophosphatase GO994_17855 PF01208 Uroporphyrinogen decarboxylase (URO-D) GO994_17860 PF00293 NUDIX domain GO994_17860 PF09297 NADH pyrophosphatase zinc ribbon domain GO994_17865 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GO994_17865 PF00171 Aldehyde dehydrogenase family GO994_17865 PF01619 Proline dehydrogenase GO994_17865 PF14850 DNA-binding domain of Proline dehydrogenase GO994_17870 PF08239 Bacterial SH3 domain GO994_17875 PF07885 Ion channel GO994_17875 PF00027 Cyclic nucleotide-binding domain GO994_17885 PF01641 SelR domain GO994_17890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GO994_17890 PF00128 Alpha amylase, catalytic domain GO994_17895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GO994_17895 PF02806 Alpha amylase, C-terminal all-beta domain GO994_17895 PF00128 Alpha amylase, catalytic domain GO994_17900 PF02446 4-alpha-glucanotransferase GO994_17905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GO994_17905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GO994_17910 PF01263 Aldose 1-epimerase GO994_17915 PF02445 Quinolinate synthetase A protein GO994_17920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_17920 PF00672 HAMP domain GO994_17985 PF16331 TolA binding protein trimerisation GO994_17985 PF13174 Tetratricopeptide repeat GO994_17990 PF00691 OmpA family GO994_17995 PF04052 TolB amino-terminal domain GO994_17995 PF07676 WD40-like Beta Propeller Repeat GO994_18005 PF02472 Biopolymer transport protein ExbD/TolR GO994_18010 PF01618 MotA/TolQ/ExbB proton channel family GO994_18015 PF03061 Thioesterase superfamily GO994_18020 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) GO994_18025 PF08173 Membrane bound YbgT-like protein GO994_18030 PF02322 Cytochrome bd terminal oxidase subunit II GO994_18035 PF01654 Cytochrome bd terminal oxidase subunit I GO994_18040 PF05496 Holliday junction DNA helicase RuvB P-loop domain GO994_18040 PF17864 RuvB AAA lid domain GO994_18040 PF05491 RuvB C-terminal winged helix domain GO994_18045 PF01330 RuvA N terminal domain GO994_18045 PF07499 RuvA, C-terminal domain GO994_18050 PF00672 HAMP domain GO994_18050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_18055 PF04073 Aminoacyl-tRNA editing domain GO994_18055 PF03129 Anticodon binding domain GO994_18055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GO994_18065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GO994_18070 PF00583 Acetyltransferase (GNAT) family GO994_18075 PF00009 Elongation factor Tu GTP binding domain GO994_18075 PF03144 Elongation factor Tu domain 2 GO994_18075 PF16658 Class II release factor RF3, C-terminal domain GO994_18080 PF00990 Diguanylate cyclase, GGDEF domain GO994_18080 PF00072 Response regulator receiver domain GO994_18090 PF01037 Lrp/AsnC ligand binding domain GO994_18100 PF05762 VWA domain containing CoxE-like protein GO994_18105 PF17868 AAA lid domain GO994_18105 PF07728 AAA domain (dynein-related subfamily) GO994_18105 PF12592 Protein of unknown function (DUF3763) GO994_18115 PF13673 Acetyltransferase (GNAT) domain GO994_18115 PF00583 Acetyltransferase (GNAT) family GO994_18125 PF00501 AMP-binding enzyme GO994_18135 PF04262 Glutamate-cysteine ligase GO994_18140 PF05193 Peptidase M16 inactive domain GO994_18140 PF00675 Insulinase (Peptidase family M16) GO994_18145 PF09335 SNARE associated Golgi protein GO994_18150 PF08240 Alcohol dehydrogenase GroES-like domain GO994_18150 PF00107 Zinc-binding dehydrogenase GO994_18175 PF00970 Oxidoreductase FAD-binding domain GO994_18175 PF00175 Oxidoreductase NAD-binding domain GO994_18180 PF03948 Ribosomal protein L9, C-terminal domain GO994_18180 PF01281 Ribosomal protein L9, N-terminal domain GO994_18185 PF01084 Ribosomal protein S18 GO994_18190 PF01250 Ribosomal protein S6 GO994_18195 PF01566 Natural resistance-associated macrophage protein GO994_18200 PF02272 DHHA1 domain GO994_18200 PF01411 tRNA synthetases class II (A) GO994_18200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GO994_18215 PF13673 Acetyltransferase (GNAT) domain GO994_18225 PF00588 SpoU rRNA Methylase family GO994_18225 PF08032 RNA 2'-O ribose methyltransferase substrate binding GO994_18230 PF17876 Cold shock domain GO994_18230 PF00575 S1 RNA binding domain GO994_18230 PF08461 Ribonuclease R winged-helix domain GO994_18230 PF00773 RNB domain GO994_18230 PF08206 Ribonuclease B OB domain GO994_18235 PF00990 Diguanylate cyclase, GGDEF domain GO994_18240 PF02664 S-Ribosylhomocysteinase (LuxS) GO994_18250 PF00543 Nitrogen regulatory protein P-II GO994_18255 PF02540 NAD synthase GO994_18255 PF00795 Carbon-nitrogen hydrolase GO994_18270 PF05567 Neisseria PilC beta-propeller domain GO994_18290 PF07963 Prokaryotic N-terminal methylation motif GO994_18290 PF14245 Type IV pilin PilA GO994_18295 PF02401 LytB protein GO994_18300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO994_18305 PF01252 Signal peptidase (SPase) II GO994_18310 PF06827 Zinc finger found in FPG and IleRS GO994_18310 PF08264 Anticodon-binding domain of tRNA GO994_18310 PF00133 tRNA synthetases class I (I, L, M and V) GO994_18315 PF06574 FAD synthetase GO994_18315 PF01687 Riboflavin kinase GO994_18320 PF03023 Lipid II flippase MurJ GO994_18325 PF01649 Ribosomal protein S20 GO994_18330 PF01022 Bacterial regulatory protein, arsR family GO994_18335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_18335 PF03466 LysR substrate binding domain GO994_18345 PF06965 Na+/H+ antiporter 1 GO994_18350 PF00303 Thymidylate synthase GO994_18355 PF01790 Prolipoprotein diacylglyceryl transferase GO994_18375 PF00293 NUDIX domain GO994_18380 PF02976 DNA mismatch repair enzyme MutH GO994_18390 PF01245 Ribosomal protein L19 GO994_18395 PF01746 tRNA (Guanine-1)-methyltransferase GO994_18400 PF05239 PRC-barrel domain GO994_18400 PF01782 RimM N-terminal domain GO994_18405 PF00886 Ribosomal protein S16 GO994_18410 PF02978 Signal peptide binding domain GO994_18410 PF02881 SRP54-type protein, helical bundle domain GO994_18410 PF00448 SRP54-type protein, GTPase domain GO994_18415 PF01578 Cytochrome C assembly protein GO994_18420 PF03471 Transporter associated domain GO994_18420 PF01595 Cyclin M transmembrane N-terminal domain GO994_18420 PF00571 CBS domain GO994_18425 PF02082 Transcriptional regulator GO994_18430 PF00175 Oxidoreductase NAD-binding domain GO994_18430 PF00970 Oxidoreductase FAD-binding domain GO994_18430 PF00042 Globin GO994_18435 PF08238 Sel1 repeat GO994_18440 PF00056 lactate/malate dehydrogenase, NAD binding domain GO994_18440 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GO994_18445 PF00528 Binding-protein-dependent transport system inner membrane component GO994_18450 PF00528 Binding-protein-dependent transport system inner membrane component GO994_18455 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_18460 PF00005 ABC transporter GO994_18465 PF02863 Arginine repressor, C-terminal domain GO994_18465 PF01316 Arginine repressor, DNA binding domain GO994_18470 PF04261 Dyp-type peroxidase family GO994_18475 PF00005 ABC transporter GO994_18475 PF08402 TOBE domain GO994_18485 PF13416 Bacterial extracellular solute-binding protein GO994_18490 PF00543 Nitrogen regulatory protein P-II GO994_18510 PF00909 Ammonium Transporter Family GO994_18515 PF05958 tRNA (Uracil-5-)-methyltransferase GO994_18515 PF01938 TRAM domain GO994_18520 PF00583 Acetyltransferase (GNAT) family GO994_18530 PF01026 TatD related DNase GO994_18545 PF01791 DeoC/LacD family aldolase GO994_18550 PF02885 Glycosyl transferase family, helical bundle domain GO994_18550 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GO994_18550 PF00591 Glycosyl transferase family, a/b domain GO994_18555 PF01676 Metalloenzyme superfamily GO994_18560 PF01048 Phosphorylase superfamily GO994_18570 PF18429 Domain of unknown function (DUF5609) GO994_18585 PF18073 Rubredoxin metal binding domain GO994_18590 PF07238 PilZ domain GO994_18595 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO994_18605 PF00216 Bacterial DNA-binding protein GO994_18620 PF01207 Dihydrouridine synthase (Dus) GO994_18625 PF01475 Ferric uptake regulator family GO994_18640 PF05525 Branched-chain amino acid transport protein GO994_18645 PF05175 Methyltransferase small domain GO994_18650 PF00271 Helicase conserved C-terminal domain GO994_18650 PF00270 DEAD/DEAH box helicase GO994_18655 PF03883 Peroxide stress protein YaaA GO994_18660 PF00437 Type II/IV secretion system protein GO994_18665 PF00437 Type II/IV secretion system protein GO994_18670 PF01168 Alanine racemase, N-terminal domain GO994_18675 PF03807 NADP oxidoreductase coenzyme F420-dependent GO994_18675 PF14748 Pyrroline-5-carboxylate reductase dimerisation GO994_18680 PF02325 YGGT family GO994_18685 PF02594 Uncharacterised ACR, YggU family COG1872 GO994_18700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_18710 PF00132 Bacterial transferase hexapeptide (six repeats) GO994_18715 PF10952 Protein of unknown function (DUF2753) GO994_18720 PF00378 Enoyl-CoA hydratase/isomerase GO994_18735 PF00106 short chain dehydrogenase GO994_18740 PF03466 LysR substrate binding domain GO994_18740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_18745 PF04371 Porphyromonas-type peptidyl-arginine deiminase GO994_18750 PF01425 Amidase GO994_18775 PF00909 Ammonium Transporter Family GO994_18780 PF00543 Nitrogen regulatory protein P-II GO994_18785 PF00990 Diguanylate cyclase, GGDEF domain GO994_18785 PF00072 Response regulator receiver domain GO994_18805 PF00990 Diguanylate cyclase, GGDEF domain GO994_18815 PF00313 'Cold-shock' DNA-binding domain GO994_18820 PF17151 Periplasmic sensor domain GO994_18820 PF00990 Diguanylate cyclase, GGDEF domain GO994_18825 PF00005 ABC transporter GO994_18825 PF17760 UvrA interaction domain GO994_18825 PF17755 UvrA DNA-binding domain GO994_18830 PF00196 Bacterial regulatory proteins, luxR family GO994_18835 PF00436 Single-strand binding protein family GO994_18865 PF03372 Endonuclease/Exonuclease/phosphatase family GO994_18880 PF00270 DEAD/DEAH box helicase GO994_18880 PF00271 Helicase conserved C-terminal domain GO994_18890 PF08534 Redoxin GO994_18895 PF00403 Heavy-metal-associated domain GO994_18915 PF02583 Metal-sensitive transcriptional repressor GO994_18920 PF00155 Aminotransferase class I and II GO994_18925 PF03466 LysR substrate binding domain GO994_18925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_18935 PF04055 Radical SAM superfamily GO994_18940 PF11230 Protein of unknown function (DUF3029) GO994_18980 PF00535 Glycosyl transferase family 2 GO994_18985 PF01522 Polysaccharide deacetylase GO994_18985 PF14883 Hypothetical glycosyl hydrolase family 13 GO994_19030 PF12857 TOBE-like domain GO994_19030 PF00005 ABC transporter GO994_19035 PF00528 Binding-protein-dependent transport system inner membrane component GO994_19040 PF00528 Binding-protein-dependent transport system inner membrane component GO994_19065 PF13194 Domain of unknown function (DUF4010) GO994_19070 PF14602 Hexapeptide repeat of succinyl-transferase GO994_19070 PF12464 Maltose acetyltransferase GO994_19100 PF14552 Tautomerase enzyme GO994_19110 PF03466 LysR substrate binding domain GO994_19110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_19115 PF14698 Argininosuccinate lyase C-terminal GO994_19115 PF00206 Lyase GO994_19135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GO994_19135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GO994_19160 PF06055 Exopolysaccharide synthesis, ExoD GO994_19170 PF08803 Putative mono-oxygenase ydhR GO994_19195 PF07715 TonB-dependent Receptor Plug Domain GO994_19195 PF00593 TonB dependent receptor GO994_19215 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GO994_19230 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GO994_19235 PF02602 Uroporphyrinogen-III synthase HemD GO994_19240 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GO994_19240 PF03900 Porphobilinogen deaminase, C-terminal domain GO994_19245 PF12633 Adenylate cyclase NT domain GO994_19245 PF01295 Adenylate cyclase, class-I GO994_19250 PF02230 Phospholipase/Carboxylesterase GO994_19255 PF01491 Frataxin-like domain GO994_19265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GO994_19265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GO994_19270 PF01678 Diaminopimelate epimerase GO994_19280 PF00589 Phage integrase family GO994_19280 PF02899 Phage integrase, N-terminal SAM-like domain GO994_19285 PF13419 Haloacid dehalogenase-like hydrolase GO994_19295 PF00924 Mechanosensitive ion channel GO994_19305 PF07722 Peptidase C26 GO994_19325 PF00005 ABC transporter GO994_19335 PF00994 Probable molybdopterin binding domain GO994_19335 PF02464 Competence-damaged protein GO994_19340 PF12072 Domain of unknown function (DUF3552) GO994_19340 PF01966 HD domain GO994_19340 PF00013 KH domain GO994_19345 PF04204 Homoserine O-succinyltransferase GO994_19355 PF01037 Lrp/AsnC ligand binding domain GO994_19360 PF00884 Sulfatase GO994_19375 PF02903 Alpha amylase, N-terminal ig-like domain GO994_19375 PF16657 Maltogenic Amylase, C-terminal domain GO994_19375 PF00128 Alpha amylase, catalytic domain GO994_19380 PF02308 MgtC family GO994_19400 PF00106 short chain dehydrogenase GO994_19405 PF03577 Peptidase family C69 GO994_19420 PF00465 Iron-containing alcohol dehydrogenase GO994_19430 PF01053 Cys/Met metabolism PLP-dependent enzyme GO994_19440 PF12793 Sugar transport-related sRNA regulator N-term GO994_19440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO994_19445 PF00141 Peroxidase GO994_19460 PF03280 Proteobacterial lipase chaperone protein GO994_19465 PF00561 alpha/beta hydrolase fold GO994_19475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GO994_19475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GO994_19480 PF02698 DUF218 domain GO994_19485 PF08453 Peptidase family M9 N-terminal GO994_19485 PF01752 Collagenase GO994_19505 PF00521 DNA gyrase/topoisomerase IV, subunit A GO994_19505 PF03989 DNA gyrase C-terminal domain, beta-propeller GO994_19510 PF00986 DNA gyrase B subunit, carboxyl terminus GO994_19510 PF01751 Toprim domain GO994_19510 PF00204 DNA gyrase B GO994_19510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_19520 PF00293 NUDIX domain GO994_19525 PF05728 Uncharacterised protein family (UPF0227) GO994_19530 PF00149 Calcineurin-like phosphoesterase GO994_19535 PF06853 Protein of unknown function (DUF1249) GO994_19540 PF00293 NUDIX domain GO994_19545 PF02321 Outer membrane efflux protein GO994_19550 PF01467 Cytidylyltransferase-like GO994_19550 PF00294 pfkB family carbohydrate kinase GO994_19555 PF03279 Bacterial lipid A biosynthesis acyltransferase GO994_19570 PF01865 Protein of unknown function DUF47 GO994_19575 PF01384 Phosphate transporter family GO994_19580 PF12627 Probable RNA and SrmB- binding site of polymerase A GO994_19580 PF01966 HD domain GO994_19580 PF01743 Poly A polymerase head domain GO994_19585 PF13401 AAA domain GO994_19585 PF01471 Putative peptidoglycan binding domain GO994_19590 PF16537 Type II secretion system protein B GO994_19595 PF10576 Iron-sulfur binding domain of endonuclease III GO994_19595 PF00730 HhH-GPD superfamily base excision DNA repair protein GO994_19595 PF00633 Helix-hairpin-helix motif GO994_19595 PF14815 NUDIX domain GO994_19600 PF04362 Bacterial Fe(2+) trafficking GO994_19605 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GO994_19605 PF01464 Transglycosylase SLT domain GO994_19610 PF04076 Bacterial OB fold (BOF) protein GO994_19615 PF00657 GDSL-like Lipase/Acylhydrolase GO994_19625 PF01389 OmpA-like transmembrane domain GO994_19625 PF00691 OmpA family GO994_19630 PF03886 ABC-type transport auxiliary lipoprotein component GO994_19635 PF02470 MlaD protein GO994_19640 PF04403 Paraquat-inducible protein A GO994_19645 PF17209 Hfq protein GO994_19650 PF13419 Haloacid dehalogenase-like hydrolase GO994_19665 PF00701 Dihydrodipicolinate synthetase family GO994_19670 PF05175 Methyltransferase small domain GO994_19670 PF08468 Methyltransferase small domain N-terminal GO994_19675 PF00483 Nucleotidyl transferase GO994_19680 PF08323 Starch synthase catalytic domain GO994_19680 PF00534 Glycosyl transferases group 1 GO994_19715 PF03553 Na+/H+ antiporter family GO994_19725 PF14602 Hexapeptide repeat of succinyl-transferase GO994_19725 PF12464 Maltose acetyltransferase GO994_19730 PF11941 Domain of unknown function (DUF3459) GO994_19730 PF00128 Alpha amylase, catalytic domain GO994_19735 PF02378 Phosphotransferase system, EIIC GO994_19735 PF00367 phosphotransferase system, EIIB GO994_19740 PF00356 Bacterial regulatory proteins, lacI family GO994_19750 PF02378 Phosphotransferase system, EIIC GO994_19755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GO994_19760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GO994_19760 PF02378 Phosphotransferase system, EIIC GO994_19765 PF00232 Glycosyl hydrolase family 1 GO994_19770 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GO994_19775 PF00480 ROK family GO994_19785 PF00356 Bacterial regulatory proteins, lacI family GO994_19795 PF00710 Asparaginase, N-terminal GO994_19795 PF17763 Glutaminase/Asparaginase C-terminal domain GO994_19810 PF02142 MGS-like domain GO994_19820 PF00210 Ferritin-like domain GO994_19835 PF08351 Domain of unknown function (DUF1726) GO994_19835 PF17176 tRNA-binding domain GO994_19835 PF13718 GNAT acetyltransferase 2 GO994_19835 PF05127 Helicase GO994_19840 PF00106 short chain dehydrogenase GO994_19845 PF01584 CheW-like domain GO994_19845 PF00072 Response regulator receiver domain GO994_19885 PF13808 DDE_Tnp_1-associated GO994_19885 PF01609 Transposase DDE domain GO994_19890 PF00589 Phage integrase family GO994_19890 PF13356 Arm DNA-binding domain GO994_19905 PF03739 Lipopolysaccharide export system permease LptF/LptG GO994_19910 PF03739 Lipopolysaccharide export system permease LptF/LptG GO994_19915 PF00883 Cytosol aminopeptidase family, catalytic domain GO994_19915 PF02789 Cytosol aminopeptidase family, N-terminal domain GO994_19920 PF04364 DNA polymerase III chi subunit, HolC GO994_19925 PF10458 Valyl tRNA synthetase tRNA binding arm GO994_19925 PF00133 tRNA synthetases class I (I, L, M and V) GO994_19925 PF08264 Anticodon-binding domain of tRNA GO994_19935 PF09335 SNARE associated Golgi protein GO994_19940 PF00768 D-alanyl-D-alanine carboxypeptidase GO994_19965 PF02599 Global regulator protein family GO994_19970 PF00696 Amino acid kinase family GO994_19970 PF13840 ACT domain GO994_19970 PF01842 ACT domain GO994_19975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GO994_19975 PF02272 DHHA1 domain GO994_19975 PF01411 tRNA synthetases class II (A) GO994_19980 PF02631 RecX family GO994_19985 PF00154 recA bacterial DNA recombination protein GO994_19995 PF04073 Aminoacyl-tRNA editing domain GO994_20015 PF00392 Bacterial regulatory proteins, gntR family GO994_20015 PF00155 Aminotransferase class I and II GO994_20030 PF03788 LrgA family GO994_20035 PF04172 LrgB-like family GO994_20050 PF00742 Homoserine dehydrogenase GO994_20050 PF00696 Amino acid kinase family GO994_20050 PF03447 Homoserine dehydrogenase, NAD binding domain GO994_20055 PF01053 Cys/Met metabolism PLP-dependent enzyme GO994_20060 PF01340 Met Apo-repressor, MetJ GO994_20065 PF02311 AraC-like ligand binding domain GO994_20065 PF12833 Helix-turn-helix domain GO994_20070 PF01588 Putative tRNA binding domain GO994_20075 PF03222 Tryptophan/tyrosine permease family GO994_20080 PF00459 Inositol monophosphatase family GO994_20085 PF00293 NUDIX domain GO994_20090 PF13419 Haloacid dehalogenase-like hydrolase GO994_20095 PF00579 tRNA synthetases class I (W and Y) GO994_20095 PF01479 S4 domain GO994_20100 PF00196 Bacterial regulatory proteins, luxR family GO994_20105 PF01203 Type II secretion system (T2SS), protein N GO994_20110 PF04612 Type II secretion system (T2SS), protein M GO994_20115 PF12693 GspL periplasmic domain GO994_20115 PF05134 Type II secretion system (T2SS), protein L GO994_20120 PF03934 Type II secretion system (T2SS), protein K GO994_20125 PF11612 Type II secretion system (T2SS), protein J GO994_20125 PF07963 Prokaryotic N-terminal methylation motif GO994_20130 PF07963 Prokaryotic N-terminal methylation motif GO994_20130 PF02501 Type II secretion system (T2SS), protein I GO994_20135 PF07963 Prokaryotic N-terminal methylation motif GO994_20135 PF12019 Type II transport protein GspH GO994_20140 PF07963 Prokaryotic N-terminal methylation motif GO994_20140 PF08334 Type II secretion system (T2SS), protein G GO994_20145 PF00482 Type II secretion system (T2SS), protein F GO994_20150 PF00437 Type II/IV secretion system protein GO994_20155 PF00263 Bacterial type II and III secretion system protein GO994_20155 PF03958 Bacterial type II/III secretion system short domain GO994_20160 PF11356 Type II secretion system protein C GO994_20165 PF01479 S4 domain GO994_20170 PF01430 Hsp33 protein GO994_20175 PF01293 Phosphoenolpyruvate carboxykinase GO994_20180 PF00392 Bacterial regulatory proteins, gntR family GO994_20185 PF00557 Metallopeptidase family M24 GO994_20185 PF01321 Creatinase/Prolidase N-terminal domain GO994_20190 PF11756 Nitrous oxide-stimulated promoter GO994_20195 PF00583 Acetyltransferase (GNAT) family GO994_20200 PF05433 Glycine zipper 2TM domain GO994_20205 PF02872 5'-nucleotidase, C-terminal domain GO994_20205 PF00149 Calcineurin-like phosphoesterase GO994_20210 PF01810 LysE type translocator GO994_20215 PF03472 Autoinducer binding domain GO994_20215 PF00196 Bacterial regulatory proteins, luxR family GO994_20220 PF00765 Autoinducer synthase GO994_20225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_20225 PF03466 LysR substrate binding domain GO994_20230 PF00773 RNB domain GO994_20230 PF17876 Cold shock domain GO994_20230 PF08206 Ribonuclease B OB domain GO994_20250 PF01232 Mannitol dehydrogenase Rossmann domain GO994_20250 PF08125 Mannitol dehydrogenase C-terminal domain GO994_20255 PF05068 Mannitol repressor GO994_20260 PF00999 Sodium/hydrogen exchanger family GO994_20260 PF03471 Transporter associated domain GO994_20260 PF02080 TrkA-C domain GO994_20265 PF00226 DnaJ domain GO994_20265 PF01556 DnaJ C terminal domain GO994_20265 PF00684 DnaJ central domain GO994_20280 PF01544 CorA-like Mg2+ transporter protein GO994_20285 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GO994_20300 PF04307 LexA-binding, inner membrane-associated putative hydrolase GO994_20305 PF07670 Nucleoside recognition GO994_20305 PF07662 Na+ dependent nucleoside transporter C-terminus GO994_20305 PF01773 Na+ dependent nucleoside transporter N-terminus GO994_20325 PF00270 DEAD/DEAH box helicase GO994_20325 PF03880 DbpA RNA binding domain GO994_20325 PF00271 Helicase conserved C-terminal domain GO994_20345 PF01609 Transposase DDE domain GO994_20345 PF13808 DDE_Tnp_1-associated GO994_20360 PF01040 UbiA prenyltransferase family GO994_20365 PF00425 chorismate binding enzyme GO994_20370 PF16582 Middle domain of thiamine pyrophosphate GO994_20370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO994_20370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO994_20375 PF12697 Alpha/beta hydrolase family GO994_20380 PF00378 Enoyl-CoA hydratase/isomerase GO994_20385 PF13378 Enolase C-terminal domain-like GO994_20390 PF00501 AMP-binding enzyme GO994_20405 PF00472 RF-1 domain GO994_20410 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GO994_20410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GO994_20415 PF07662 Na+ dependent nucleoside transporter C-terminus GO994_20415 PF07670 Nucleoside recognition GO994_20415 PF01773 Na+ dependent nucleoside transporter N-terminus GO994_20420 PF03466 LysR substrate binding domain GO994_20420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_20425 PF00255 Glutathione peroxidase GO994_20435 PF02595 Glycerate kinase family GO994_20440 PF02447 GntP family permease GO994_20445 PF05651 Putative sugar diacid recognition GO994_20445 PF13556 PucR C-terminal helix-turn-helix domain GO994_20445 PF17853 GGDEF-like domain GO994_20450 PF06062 Uncharacterised protein family (UPF0231) GO994_20515 PF00226 DnaJ domain GO994_20515 PF01556 DnaJ C terminal domain GO994_20515 PF00684 DnaJ central domain GO994_20520 PF07681 DoxX GO994_20525 PF00085 Thioredoxin GO994_20545 PF01553 Acyltransferase GO994_20565 PF01541 GIY-YIG catalytic domain GO994_20580 PF03167 Uracil DNA glycosylase superfamily GO994_20590 PF03466 LysR substrate binding domain GO994_20590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_20595 PF00950 ABC 3 transport family GO994_20600 PF00005 ABC transporter GO994_20605 PF01297 Zinc-uptake complex component A periplasmic GO994_20625 PF08525 Opacity-associated protein A N-terminal motif GO994_20625 PF01476 LysM domain GO994_20625 PF01551 Peptidase family M23 GO994_20630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO994_20635 PF04222 Protein of unknown function (DUF416) GO994_20650 PF02028 BCCT, betaine/carnitine/choline family transporter GO994_20655 PF05188 MutS domain II GO994_20655 PF01624 MutS domain I GO994_20655 PF05192 MutS domain III GO994_20655 PF05190 MutS family domain IV GO994_20655 PF00488 MutS domain V GO994_20665 PF06953 Arsenical resistance operon trans-acting repressor ArsD GO994_20675 PF01758 Sodium Bile acid symporter family GO994_20680 PF03960 ArsC family GO994_20700 PF00311 Phosphoenolpyruvate carboxylase GO994_20705 PF07687 Peptidase dimerisation domain GO994_20705 PF01546 Peptidase family M20/M25/M40 GO994_20710 PF02774 Semialdehyde dehydrogenase, dimerisation domain GO994_20710 PF01118 Semialdehyde dehydrogenase, NAD binding domain GO994_20735 PF01609 Transposase DDE domain GO994_20735 PF13808 DDE_Tnp_1-associated GO994_20740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GO994_20745 PF02719 Polysaccharide biosynthesis protein GO994_20750 PF00128 Alpha amylase, catalytic domain GO994_20750 PF02903 Alpha amylase, N-terminal ig-like domain GO994_20765 PF00012 Hsp70 protein GO994_20770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO994_20770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO994_20775 PF05981 CreA protein GO994_20785 PF01258 Prokaryotic dksA/traR C4-type zinc finger GO994_20790 PF00120 Glutamine synthetase, catalytic domain GO994_20795 PF00202 Aminotransferase class-III GO994_20800 PF13416 Bacterial extracellular solute-binding protein GO994_20805 PF13416 Bacterial extracellular solute-binding protein GO994_20810 PF00005 ABC transporter GO994_20810 PF08402 TOBE domain GO994_20815 PF00528 Binding-protein-dependent transport system inner membrane component GO994_20820 PF00528 Binding-protein-dependent transport system inner membrane component GO994_20825 PF03475 3-alpha domain GO994_20825 PF03473 MOSC domain GO994_20840 PF03061 Thioesterase superfamily GO994_20845 PF00570 HRDC domain GO994_20845 PF00270 DEAD/DEAH box helicase GO994_20845 PF16124 RecQ zinc-binding GO994_20845 PF09382 RQC domain GO994_20845 PF00271 Helicase conserved C-terminal domain GO994_20850 PF00034 Cytochrome c GO994_20865 PF02592 Putative vitamin uptake transporter GO994_20870 PF03737 Aldolase/RraA GO994_20875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_20875 PF00672 HAMP domain GO994_20880 PF03448 MgtE intracellular N domain GO994_20880 PF00571 CBS domain GO994_20880 PF01769 Divalent cation transporter GO994_20885 PF14824 Sirohaem biosynthesis protein central GO994_20885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GO994_20885 PF10414 Sirohaem synthase dimerisation region GO994_20890 PF01226 Formate/nitrite transporter GO994_20895 PF13806 Rieske-like [2Fe-2S] domain GO994_20900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GO994_20900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GO994_20900 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_20900 PF18267 Rubredoxin NAD+ reductase C-terminal domain GO994_20900 PF04324 BFD-like [2Fe-2S] binding domain GO994_20905 PF03466 LysR substrate binding domain GO994_20905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_20910 PF07690 Major Facilitator Superfamily GO994_20915 PF10431 C-terminal, D2-small domain, of ClpB protein GO994_20915 PF00004 ATPase family associated with various cellular activities (AAA) GO994_20915 PF07724 AAA domain (Cdc48 subfamily) GO994_20920 PF00227 Proteasome subunit GO994_20930 PF00750 tRNA synthetases class I (R) GO994_20930 PF05746 DALR anticodon binding domain GO994_20930 PF03485 Arginyl tRNA synthetase N terminal domain GO994_20940 PF04545 Sigma-70, region 4 GO994_20940 PF04542 Sigma-70 region 2 GO994_20950 PF02673 Bacitracin resistance protein BacA GO994_20955 PF00248 Aldo/keto reductase family GO994_20960 PF01263 Aldose 1-epimerase GO994_20965 PF08544 GHMP kinases C terminal GO994_20965 PF00288 GHMP kinases N terminal domain GO994_20965 PF10509 Galactokinase galactose-binding signature GO994_20970 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GO994_20970 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GO994_20975 PF16363 GDP-mannose 4,6 dehydratase GO994_20980 PF00356 Bacterial regulatory proteins, lacI family GO994_20985 PF02929 Beta galactosidase small chain GO994_20985 PF16353 Domain of unknown function(DUF4981) GO994_20985 PF00703 Glycosyl hydrolases family 2 GO994_20985 PF02837 Glycosyl hydrolases family 2, sugar binding domain GO994_20985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GO994_20990 PF13407 Periplasmic binding protein domain GO994_20995 PF00005 ABC transporter GO994_21000 PF02653 Branched-chain amino acid transport system / permease component GO994_21005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO994_21005 PF02743 Cache domain GO994_21005 PF00672 HAMP domain GO994_21010 PF00872 Transposase, Mutator family GO994_21030 PF01609 Transposase DDE domain GO994_21030 PF13808 DDE_Tnp_1-associated GO994_21060 PF06628 Catalase-related immune-responsive GO994_21060 PF00199 Catalase GO994_21065 PF00583 Acetyltransferase (GNAT) family GO994_21085 PF00990 Diguanylate cyclase, GGDEF domain GO994_21095 PF00005 ABC transporter GO994_21095 PF08402 TOBE domain GO994_21105 PF00528 Binding-protein-dependent transport system inner membrane component GO994_21120 PF00392 Bacterial regulatory proteins, gntR family GO994_21120 PF07702 UTRA domain GO994_21130 PF03466 LysR substrate binding domain GO994_21130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO994_21140 PF17954 Quercetinase C-terminal cupin domain GO994_21140 PF02678 Pirin GO994_21145 PF07681 DoxX GO994_21150 PF17946 RecC C-terminal domain GO994_21155 PF00580 UvrD/REP helicase N-terminal domain GO994_21155 PF13361 UvrD-like helicase C-terminal domain GO994_21155 PF12705 PD-(D/E)XK nuclease superfamily GO994_21160 PF13538 UvrD-like helicase C-terminal domain GO994_21235 PF05958 tRNA (Uracil-5-)-methyltransferase GO994_21240 PF00486 Transcriptional regulatory protein, C terminal GO994_21240 PF00072 Response regulator receiver domain GO994_21245 PF00512 His Kinase A (phospho-acceptor) domain GO994_21245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_21245 PF00672 HAMP domain GO994_21255 PF00390 Malic enzyme, N-terminal domain GO994_21255 PF03949 Malic enzyme, NAD binding domain GO994_21260 PF13460 NAD(P)H-binding GO994_21260 PF11066 Protein of unknown function (DUF2867) GO994_21265 PF01197 Ribosomal protein L31 GO994_21270 PF00270 DEAD/DEAH box helicase GO994_21270 PF18074 Primosomal protein N C-terminal domain GO994_21270 PF00271 Helicase conserved C-terminal domain GO994_21270 PF17764 3′ DNA-binding domain (3′BD) GO994_21270 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GO994_21280 PF00440 Bacterial regulatory proteins, tetR family GO994_21290 PF00691 OmpA family GO994_21290 PF01389 OmpA-like transmembrane domain GO994_21295 PF00585 C-terminal regulatory domain of Threonine dehydratase GO994_21295 PF00291 Pyridoxal-phosphate dependent enzyme GO994_21300 PF00920 Dehydratase family GO994_21305 PF01063 Amino-transferase class IV GO994_21315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO994_21315 PF00205 Thiamine pyrophosphate enzyme, central domain GO994_21315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO994_21325 PF01078 Magnesium chelatase, subunit ChlI GO994_21325 PF13335 Magnesium chelatase, subunit ChlI C-terminal GO994_21335 PF04463 Protein of unknown function (DUF523) GO994_21345 PF00857 Isochorismatase family GO994_21350 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GO994_21350 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GO994_21360 PF00005 ABC transporter GO994_21370 PF01323 DSBA-like thioredoxin domain GO994_21375 PF01636 Phosphotransferase enzyme family GO994_21380 PF13746 4Fe-4S dicluster domain GO994_21380 PF12801 4Fe-4S binding domain GO994_21380 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GO994_21385 PF06288 Protein of unknown function (DUF1040) GO994_21390 PF00563 EAL domain GO994_21390 PF01590 GAF domain GO994_21390 PF00990 Diguanylate cyclase, GGDEF domain GO994_21390 PF00360 Phytochrome region GO994_21395 PF13411 MerR HTH family regulatory protein GO994_21400 PF00403 Heavy-metal-associated domain GO994_21405 PF00156 Phosphoribosyl transferase domain GO994_21410 PF01138 3' exoribonuclease family, domain 1 GO994_21410 PF03725 3' exoribonuclease family, domain 2 GO994_21415 PF03755 YicC-like family, N-terminal region GO994_21415 PF08340 Domain of unknown function (DUF1732) GO994_21430 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) GO994_21460 PF13808 DDE_Tnp_1-associated GO994_21460 PF01609 Transposase DDE domain GO994_21465 PF13592 Winged helix-turn helix GO994_21465 PF13358 DDE superfamily endonuclease GO994_21475 PF01370 NAD dependent epimerase/dehydratase family GO994_21480 PF00440 Bacterial regulatory proteins, tetR family GO994_21480 PF08360 QacR-like protein, C-terminal region GO994_21485 PF00155 Aminotransferase class I and II GO994_21490 PF08240 Alcohol dehydrogenase GroES-like domain GO994_21490 PF00107 Zinc-binding dehydrogenase GO994_21515 PF00580 UvrD/REP helicase N-terminal domain GO994_21515 PF13361 UvrD-like helicase C-terminal domain GO994_21520 PF00266 Aminotransferase class-V GO994_21525 PF02657 Fe-S metabolism associated domain GO994_21530 PF00899 ThiF family GO994_21560 PF12724 Flavodoxin domain GO994_21565 PF02386 Cation transport protein GO994_21570 PF01205 Uncharacterized protein family UPF0029 GO994_21570 PF09186 Domain of unknown function (DUF1949) GO994_21575 PF00557 Metallopeptidase family M24 GO994_21580 PF00501 AMP-binding enzyme GO994_21580 PF13193 AMP-binding enzyme C-terminal domain GO994_21585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GO994_21585 PF00378 Enoyl-CoA hydratase/isomerase GO994_21585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GO994_21590 PF02803 Thiolase, C-terminal domain GO994_21590 PF00108 Thiolase, N-terminal domain GO994_21595 PF00486 Transcriptional regulatory protein, C terminal GO994_21595 PF00072 Response regulator receiver domain GO994_21600 PF00672 HAMP domain GO994_21600 PF00512 His Kinase A (phospho-acceptor) domain GO994_21600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO994_21605 PF01547 Bacterial extracellular solute-binding protein GO994_21615 PF01206 Sulfurtransferase TusA GO994_21620 PF01042 Endoribonuclease L-PSP GO994_21625 PF00691 OmpA family GO994_21625 PF13488 Glycine zipper GO994_21630 PF03352 Methyladenine glycosylase GO994_21635 PF02091 Glycyl-tRNA synthetase alpha subunit GO994_21640 PF05746 DALR anticodon binding domain GO994_21640 PF02092 Glycyl-tRNA synthetase beta subunit GO994_21650 PF00872 Transposase, Mutator family GO994_21655 PF01609 Transposase DDE domain GO994_21665 PF09013 YopH, N-terminal GO994_21665 PF00102 Protein-tyrosine phosphatase GO994_21690 PF01202 Shikimate kinase GO994_21700 PF00990 Diguanylate cyclase, GGDEF domain GO994_21700 PF13426 PAS domain GO994_21700 PF00563 EAL domain GO994_21710 PF05932 Tir chaperone protein (CesT) family GO994_21715 PF03222 Tryptophan/tyrosine permease family GO994_21720 PF12801 4Fe-4S binding domain GO994_21730 PF18113 Rubredoxin binding C-terminal domain GO994_21730 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO994_21735 PF00301 Rubredoxin GO994_21735 PF00753 Metallo-beta-lactamase superfamily GO994_21735 PF00258 Flavodoxin GO994_21740 PF01590 GAF domain GO994_21740 PF00158 Sigma-54 interaction domain GO994_21745 PF07702 UTRA domain GO994_21745 PF00392 Bacterial regulatory proteins, gntR family GO994_21750 PF01609 Transposase DDE domain GO994_21750 PF13808 DDE_Tnp_1-associated GO994_21755 PF00367 phosphotransferase system, EIIB GO994_21755 PF02378 Phosphotransferase system, EIIC GO994_21775 PF00356 Bacterial regulatory proteins, lacI family GO994_21780 PF13458 Periplasmic binding protein GO994_21785 PF02653 Branched-chain amino acid transport system / permease component GO994_21790 PF11862 Domain of unknown function (DUF3382) GO994_21790 PF02653 Branched-chain amino acid transport system / permease component GO994_21795 PF12399 Branched-chain amino acid ATP-binding cassette transporter GO994_21795 PF00005 ABC transporter GO994_21810 PF01810 LysE type translocator GO994_21815 PF00581 Rhodanese-like domain GO994_21820 PF01694 Rhomboid family GO994_21820 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GO994_21825 PF12262 Bacterial virulence factor lipase N-terminal GO994_21830 PF04380 Membrane fusogenic activity GO994_21835 PF00175 Oxidoreductase NAD-binding domain GO994_21840 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GO994_21850 PF07497 Rho termination factor, RNA-binding domain GO994_21850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO994_21850 PF07498 Rho termination factor, N-terminal domain GO994_21855 PF00085 Thioredoxin GO994_21860 PF00270 DEAD/DEAH box helicase GO994_21860 PF00271 Helicase conserved C-terminal domain GO994_21865 PF02541 Ppx/GppA phosphatase family GO994_21875 PF04445 Putative SAM-dependent methyltransferase GO994_21880 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_21885 PF00563 EAL domain GO994_21885 PF00990 Diguanylate cyclase, GGDEF domain GO994_21885 PF03707 Bacterial signalling protein N terminal repeat GO994_21890 PF01432 Peptidase family M3 GO994_21895 PF00490 Delta-aminolevulinic acid dehydratase GO994_21900 PF01026 TatD related DNase GO994_21905 PF00902 Sec-independent protein translocase protein (TatC) GO994_21910 PF02416 mttA/Hcf106 family GO994_21915 PF02416 mttA/Hcf106 family GO994_21920 PF03109 ABC1 family GO994_21925 PF02036 SCP-2 sterol transfer family GO994_21930 PF01209 ubiE/COQ5 methyltransferase family GO994_21935 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GO994_21940 PF07969 Amidohydrolase family GO994_21980 PF03544 Gram-negative bacterial TonB protein C-terminal GO994_21985 PF02472 Biopolymer transport protein ExbD/TolR GO994_21990 PF01618 MotA/TolQ/ExbB proton channel family GO994_21995 PF01618 MotA/TolQ/ExbB proton channel family GO994_22005 PF03472 Autoinducer binding domain GO994_22005 PF00196 Bacterial regulatory proteins, luxR family GO994_22010 PF01380 SIS domain GO994_22015 PF08220 DeoR-like helix-turn-helix domain GO994_22015 PF00455 DeoR C terminal sensor domain GO994_22020 PF00072 Response regulator receiver domain GO994_22020 PF00486 Transcriptional regulatory protein, C terminal GO994_22030 PF00905 Penicillin binding protein transpeptidase domain GO994_22035 PF06123 Inner membrane protein CreD GO994_22040 PF00132 Bacterial transferase hexapeptide (six repeats) GO994_22040 PF12804 MobA-like NTP transferase domain GO994_22040 PF14602 Hexapeptide repeat of succinyl-transferase GO994_22045 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GO994_22045 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GO994_22050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO994_22050 PF02874 ATP synthase alpha/beta family, beta-barrel domain GO994_22055 PF00231 ATP synthase GO994_22060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO994_22060 PF02874 ATP synthase alpha/beta family, beta-barrel domain GO994_22060 PF00306 ATP synthase alpha/beta chain, C terminal domain GO994_22065 PF00213 ATP synthase delta (OSCP) subunit GO994_22070 PF00430 ATP synthase B/B' CF(0) GO994_22075 PF00137 ATP synthase subunit C GO994_22080 PF00119 ATP synthase A chain GO994_22085 PF03899 ATP synthase I chain GO994_22090 PF17762 HTH domain found in ParB protein GO994_22090 PF02195 ParB-like nuclease domain GO994_22095 PF13614 AAA domain GO994_22100 PF02527 rRNA small subunit methyltransferase G GO994_22105 PF01134 Glucose inhibited division protein A GO994_22105 PF13932 GidA associated domain GO994_22110 PF00258 Flavodoxin GO994_22115 PF07715 TonB-dependent Receptor Plug Domain GO994_22115 PF00593 TonB dependent receptor GO994_22120 PF00005 ABC transporter GO994_22125 PF00005 ABC transporter GO994_22130 PF01497 Periplasmic binding protein GO994_22135 PF01032 FecCD transport family GO994_22140 PF07715 TonB-dependent Receptor Plug Domain GO994_22140 PF00593 TonB dependent receptor GO994_22145 PF01497 Periplasmic binding protein GO994_22150 PF00005 ABC transporter GO994_22155 PF01032 FecCD transport family GO994_22160 PF01032 FecCD transport family GO994_22165 PF00005 ABC transporter GO994_22170 PF04954 Siderophore-interacting protein GO994_22170 PF08021 Siderophore-interacting FAD-binding domain GO994_22170 PF00005 ABC transporter GO994_22170 PF00664 ABC transporter transmembrane region GO994_22180 PF00501 AMP-binding enzyme GO994_22180 PF00975 Thioesterase domain GO994_22180 PF13193 AMP-binding enzyme C-terminal domain GO994_22180 PF00668 Condensation domain GO994_22180 PF00550 Phosphopantetheine attachment site GO994_22185 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GO994_22190 PF00550 Phosphopantetheine attachment site GO994_22190 PF00668 Condensation domain GO994_22190 PF00501 AMP-binding enzyme GO994_22200 PF00282 Pyridoxal-dependent decarboxylase conserved domain GO994_22205 PF01926 50S ribosome-binding GTPase GO994_22205 PF10396 GTP-binding protein TrmE N-terminus GO994_22205 PF12631 MnmE helical domain GO994_22210 PF14849 YidC periplasmic domain GO994_22210 PF02096 60Kd inner membrane protein GO994_22215 PF01809 Putative membrane protein insertion efficiency factor GO994_22220 PF00825 Ribonuclease P GO994_22225 PF00468 Ribosomal protein L34 GO994_22235 PF00528 Binding-protein-dependent transport system inner membrane component GO994_22240 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO994_22250 PF01548 Transposase GO994_22250 PF02371 Transposase IS116/IS110/IS902 family GO994_22260 PF02108 Flagellar assembly protein FliH GO994_22265 PF06578 YOP proteins translocation protein K (YscK) GO994_22270 PF01514 Secretory protein of YscJ/FliF family GO994_22275 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI GO994_22280 PF09025 YopR, type III needle-polymerisation regulator GO994_22285 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) GO994_22290 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF GO994_22300 PF16693 Inner membrane component of T3SS, periplasmic domain GO994_22300 PF16697 Inner membrane component of T3SS, cytoplasmic domain GO994_22310 PF05932 Tir chaperone protein (CesT) family GO994_22320 PF12833 Helix-turn-helix domain GO994_22335 PF05932 Tir chaperone protein (CesT) family GO994_22340 PF05844 YopD protein GO994_22345 PF04888 Secretion system effector C (SseC) like family GO994_22350 PF07720 Tetratricopeptide repeat GO994_22355 PF04792 V antigen (LcrV) protein GO994_22360 PF07216 LcrG protein GO994_22365 PF09621 Type III secretion system regulator (LcrR) GO994_22370 PF00771 FHIPEP family GO994_22380 PF09474 Type III secretion system YscX (type_III_YscX) GO994_22390 PF09059 TyeA GO994_22395 PF07201 HrpJ-like domain GO994_22400 PF02874 ATP synthase alpha/beta family, beta-barrel domain GO994_22400 PF18269 T3SS EscN ATPase C-terminal domain GO994_22400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO994_22420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GO994_22425 PF00813 FliP family GO994_22430 PF01313 Bacterial export proteins, family 3 GO994_22440 PF01312 FlhB HrpN YscU SpaS Family GO994_22465 PF00561 alpha/beta hydrolase fold GO994_22480 PF13614 AAA domain GO994_22545 PF01848 Hok/gef family GO994_22565 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GO994_22610 PF02796 Helix-turn-helix domain of resolvase GO994_22610 PF00239 Resolvase, N terminal domain GO994_22625 PF01695 IstB-like ATP binding protein GO994_22640 PF01848 Hok/gef family GO994_22685 PF00816 H-NS histone family GO994_22695 PF13614 AAA domain GO994_22705 PF00872 Transposase, Mutator family