locus-tag class description FE240_00010 PF00585 C-terminal regulatory domain of Threonine dehydratase FE240_00010 PF00291 Pyridoxal-phosphate dependent enzyme FE240_00015 PF00920 Dehydratase family FE240_00020 PF01063 Amino-transferase class IV FE240_00030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE240_00030 PF00205 Thiamine pyrophosphate enzyme, central domain FE240_00030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE240_00040 PF01078 Magnesium chelatase, subunit ChlI FE240_00040 PF13335 Magnesium chelatase, subunit ChlI C-terminal FE240_00045 PF01553 Acyltransferase FE240_00050 PF01553 Acyltransferase FE240_00055 PF04463 Protein of unknown function (DUF523) FE240_00065 PF00857 Isochorismatase family FE240_00070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FE240_00070 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FE240_00075 PF07670 Nucleoside recognition FE240_00075 PF01773 Na+ dependent nucleoside transporter N-terminus FE240_00075 PF07662 Na+ dependent nucleoside transporter C-terminus FE240_00080 PF02592 Putative vitamin uptake transporter FE240_00090 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FE240_00100 PF00270 DEAD/DEAH box helicase FE240_00100 PF00271 Helicase conserved C-terminal domain FE240_00100 PF00570 HRDC domain FE240_00100 PF16124 RecQ zinc-binding FE240_00100 PF09382 RQC domain FE240_00105 PF03061 Thioesterase superfamily FE240_00120 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FE240_00125 PF02602 Uroporphyrinogen-III synthase HemD FE240_00130 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FE240_00130 PF03900 Porphobilinogen deaminase, C-terminal domain FE240_00135 PF01295 Adenylate cyclase, class-I FE240_00135 PF12633 Adenylate cyclase NT domain FE240_00145 PF01491 Frataxin-like domain FE240_00155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FE240_00155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FE240_00160 PF01678 Diaminopimelate epimerase FE240_00170 PF02899 Phage integrase, N-terminal SAM-like domain FE240_00170 PF00589 Phage integrase family FE240_00175 PF13419 Haloacid dehalogenase-like hydrolase FE240_00180 PF02954 Bacterial regulatory protein, Fis family FE240_00180 PF00158 Sigma-54 interaction domain FE240_00180 PF00072 Response regulator receiver domain FE240_00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_00185 PF00989 PAS fold FE240_00185 PF00512 His Kinase A (phospho-acceptor) domain FE240_00195 PF00120 Glutamine synthetase, catalytic domain FE240_00195 PF03951 Glutamine synthetase, beta-Grasp domain FE240_00200 PF00009 Elongation factor Tu GTP binding domain FE240_00200 PF00679 Elongation factor G C-terminus FE240_00200 PF03144 Elongation factor Tu domain 2 FE240_00205 PF03631 Virulence factor BrkB FE240_00210 PF12146 Serine aminopeptidase, S33 FE240_00215 PF12105 SpoU, rRNA methylase, C-terminal FE240_00215 PF00588 SpoU rRNA Methylase family FE240_00220 PF02824 TGS domain FE240_00220 PF13291 ACT domain FE240_00220 PF04607 Region found in RelA / SpoT proteins FE240_00225 PF01192 RNA polymerase Rpb6 FE240_00230 PF00625 Guanylate kinase FE240_00235 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FE240_00250 PF00892 EamA-like transporter family FE240_00265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_00265 PF03466 LysR substrate binding domain FE240_00270 PF00579 tRNA synthetases class I (W and Y) FE240_00275 PF00582 Universal stress protein family FE240_00280 PF07055 Enoyl reductase FAD binding domain FE240_00280 PF12241 Trans-2-enoyl-CoA reductase catalytic region FE240_00280 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FE240_00285 PF00210 Ferritin-like domain FE240_00295 PF01810 LysE type translocator FE240_00310 PF16967 E-set like domain FE240_00310 PF15976 CS1-pili formation C-terminal FE240_00315 PF18649 EcpB C-terminal domain FE240_00320 PF16449 Fimbrillin MatB FE240_00325 PF00072 Response regulator receiver domain FE240_00325 PF00196 Bacterial regulatory proteins, luxR family FE240_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_00330 PF00072 Response regulator receiver domain FE240_00330 PF01627 Hpt domain FE240_00330 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_00330 PF00989 PAS fold FE240_00330 PF00512 His Kinase A (phospho-acceptor) domain FE240_00340 PF02222 ATP-grasp domain FE240_00340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FE240_00345 PF00731 AIR carboxylase FE240_00350 PF00593 TonB dependent receptor FE240_00350 PF07715 TonB-dependent Receptor Plug Domain FE240_00355 PF01177 Asp/Glu/Hydantoin racemase FE240_00390 PF00342 Phosphoglucose isomerase FE240_00395 PF00403 Heavy-metal-associated domain FE240_00400 PF00376 MerR family regulatory protein FE240_00400 PF09278 MerR, DNA binding FE240_00405 PF00360 Phytochrome region FE240_00405 PF00990 Diguanylate cyclase, GGDEF domain FE240_00405 PF01590 GAF domain FE240_00405 PF00563 EAL domain FE240_00410 PF06288 Protein of unknown function (DUF1040) FE240_00415 PF12801 4Fe-4S binding domain FE240_00415 PF13746 4Fe-4S dicluster domain FE240_00415 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FE240_00420 PF01636 Phosphotransferase enzyme family FE240_00425 PF01323 DSBA-like thioredoxin domain FE240_00430 PF16921 Tex protein YqgF-like domain FE240_00430 PF09371 Tex-like protein N-terminal domain FE240_00430 PF00575 S1 RNA binding domain FE240_00430 PF17674 HHH domain FE240_00435 PF01272 Transcription elongation factor, GreA/GreB, C-term FE240_00435 PF03449 Transcription elongation factor, N-terminal FE240_00440 PF00072 Response regulator receiver domain FE240_00440 PF00486 Transcriptional regulatory protein, C terminal FE240_00445 PF00672 HAMP domain FE240_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_00445 PF00512 His Kinase A (phospho-acceptor) domain FE240_00450 PF01293 Phosphoenolpyruvate carboxykinase FE240_00455 PF01430 Hsp33 protein FE240_00460 PF01479 S4 domain FE240_00465 PF11356 Type II secretion system protein C FE240_00470 PF03958 Bacterial type II/III secretion system short domain FE240_00470 PF00263 Bacterial type II and III secretion system protein FE240_00475 PF00437 Type II/IV secretion system protein FE240_00480 PF00482 Type II secretion system (T2SS), protein F FE240_00485 PF08334 Type II secretion system (T2SS), protein G FE240_00485 PF07963 Prokaryotic N-terminal methylation motif FE240_00490 PF12019 Type II transport protein GspH FE240_00490 PF07963 Prokaryotic N-terminal methylation motif FE240_00495 PF07963 Prokaryotic N-terminal methylation motif FE240_00495 PF02501 Type II secretion system (T2SS), protein I FE240_00500 PF11612 Type II secretion system (T2SS), protein J FE240_00500 PF07963 Prokaryotic N-terminal methylation motif FE240_00505 PF03934 Type II secretion system (T2SS), protein K FE240_00510 PF12693 GspL periplasmic domain FE240_00510 PF05134 Type II secretion system (T2SS), protein L FE240_00515 PF04612 Type II secretion system (T2SS), protein M FE240_00520 PF01203 Type II secretion system (T2SS), protein N FE240_00525 PF00528 Binding-protein-dependent transport system inner membrane component FE240_00530 PF00528 Binding-protein-dependent transport system inner membrane component FE240_00535 PF12857 TOBE-like domain FE240_00535 PF00005 ABC transporter FE240_00540 PF03466 LysR substrate binding domain FE240_00540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_00560 PF00106 short chain dehydrogenase FE240_00565 PF00465 Iron-containing alcohol dehydrogenase FE240_00575 PF01053 Cys/Met metabolism PLP-dependent enzyme FE240_00580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_00580 PF12793 Sugar transport-related sRNA regulator N-term FE240_00595 PF00561 alpha/beta hydrolase fold FE240_00605 PF01521 Iron-sulphur cluster biosynthesis FE240_00605 PF01106 NifU-like domain FE240_00610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FE240_00610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FE240_00615 PF02556 Preprotein translocase subunit SecB FE240_00620 PF00581 Rhodanese-like domain FE240_00625 PF01676 Metalloenzyme superfamily FE240_00625 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FE240_00630 PF01551 Peptidase family M23 FE240_00635 PF00909 Ammonium Transporter Family FE240_00640 PF00356 Bacterial regulatory proteins, lacI family FE240_00640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE240_00645 PF01081 KDPG and KHG aldolase FE240_00650 PF00920 Dehydratase family FE240_00655 PF01202 Shikimate kinase FE240_00660 PF02447 GntP family permease FE240_00665 PF13091 PLD-like domain FE240_00670 PF00270 DEAD/DEAH box helicase FE240_00670 PF00271 Helicase conserved C-terminal domain FE240_00670 PF17191 RecG wedge domain FE240_00680 PF09500 Putative thioesterase (yiiD_Cterm) FE240_00680 PF00583 Acetyltransferase (GNAT) family FE240_00690 PF02580 D-Tyr-tRNA(Tyr) deacylase FE240_00695 PF04204 Homoserine O-succinyltransferase FE240_00700 PF00994 Probable molybdopterin binding domain FE240_00705 PF00034 Cytochrome c FE240_00710 PF01926 50S ribosome-binding GTPase FE240_00715 PF02653 Branched-chain amino acid transport system / permease component FE240_00720 PF02653 Branched-chain amino acid transport system / permease component FE240_00725 PF00005 ABC transporter FE240_00730 PF02608 ABC transporter substrate-binding protein PnrA-like FE240_00735 PF12464 Maltose acetyltransferase FE240_00735 PF14602 Hexapeptide repeat of succinyl-transferase FE240_00740 PF13194 Domain of unknown function (DUF4010) FE240_00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_00750 PF00072 Response regulator receiver domain FE240_00750 PF00486 Transcriptional regulatory protein, C terminal FE240_00765 PF01964 Radical SAM ThiC family FE240_00765 PF13667 ThiC-associated domain FE240_00770 PF02581 Thiamine monophosphate synthase FE240_00775 PF00899 ThiF family FE240_00785 PF05690 Thiazole biosynthesis protein ThiG FE240_00790 PF06968 Biotin and Thiamin Synthesis associated domain FE240_00790 PF04055 Radical SAM superfamily FE240_00805 PF13036 Peptidoglycan-synthase activator LpoB FE240_00810 PF02567 Phenazine biosynthesis-like protein FE240_00815 PF00704 Glycosyl hydrolases family 18 FE240_00815 PF08329 Chitinase A, N-terminal domain FE240_00830 PF03466 LysR substrate binding domain FE240_00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_00840 PF02678 Pirin FE240_00840 PF17954 Quercetinase C-terminal cupin domain FE240_00845 PF07681 DoxX FE240_00850 PF17946 RecC C-terminal domain FE240_00855 PF00580 UvrD/REP helicase N-terminal domain FE240_00855 PF12705 PD-(D/E)XK nuclease superfamily FE240_00855 PF13361 UvrD-like helicase C-terminal domain FE240_00860 PF13538 UvrD-like helicase C-terminal domain FE240_00865 PF03880 DbpA RNA binding domain FE240_00865 PF00270 DEAD/DEAH box helicase FE240_00865 PF00271 Helicase conserved C-terminal domain FE240_00870 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE240_00870 PF07683 Cobalamin synthesis protein cobW C-terminal domain FE240_00875 PF04328 Selenoprotein, putative FE240_00880 PF13722 5TM C-terminal transporter carbon starvation CstA FE240_00880 PF02554 Carbon starvation protein CstA FE240_00885 PF08534 Redoxin FE240_00890 PF00445 Ribonuclease T2 family FE240_00895 PF03060 Nitronate monooxygenase FE240_00900 PF00293 NUDIX domain FE240_00920 PF00128 Alpha amylase, catalytic domain FE240_00925 PF04228 Putative neutral zinc metallopeptidase FE240_00930 PF03313 Serine dehydratase alpha chain FE240_00935 PF00375 Sodium:dicarboxylate symporter family FE240_00940 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_00940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE240_00945 PF13525 Outer membrane lipoprotein FE240_00950 PF00849 RNA pseudouridylate synthase FE240_00950 PF01479 S4 domain FE240_00955 PF00860 Permease family FE240_00960 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FE240_00960 PF02843 Phosphoribosylglycinamide synthetase, C domain FE240_00960 PF02844 Phosphoribosylglycinamide synthetase, N domain FE240_00965 PF02142 MGS-like domain FE240_00965 PF01808 AICARFT/IMPCHase bienzyme FE240_00970 PF13411 MerR HTH family regulatory protein FE240_00980 PF04055 Radical SAM superfamily FE240_00980 PF06969 HemN C-terminal domain FE240_00985 PF01725 Ham1 family FE240_00990 PF00149 Calcineurin-like phosphoesterase FE240_00995 PF07690 Major Facilitator Superfamily FE240_01000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE240_01000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE240_01010 PF13302 Acetyltransferase (GNAT) domain FE240_01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_01020 PF03466 LysR substrate binding domain FE240_01025 PF07690 Major Facilitator Superfamily FE240_01030 PF03605 Anaerobic c4-dicarboxylate membrane transporter FE240_01035 PF10415 Fumarase C C-terminus FE240_01035 PF00206 Lyase FE240_01040 PF04186 FxsA cytoplasmic membrane protein FE240_01045 PF01554 MatE FE240_01050 PF00166 Chaperonin 10 Kd subunit FE240_01055 PF00118 TCP-1/cpn60 chaperonin family FE240_01070 PF13737 Transposase DDE domain FE240_01090 PF00849 RNA pseudouridylate synthase FE240_01095 PF18337 RapA N-terminal Tudor like domain FE240_01095 PF18339 RapA N-terminal Tudor like domain 1 FE240_01095 PF12137 RNA polymerase recycling family C-terminal FE240_01095 PF00271 Helicase conserved C-terminal domain FE240_01095 PF00176 SNF2 family N-terminal domain FE240_01125 PF02562 PhoH-like protein FE240_01125 PF13638 PIN domain FE240_01130 PF00005 ABC transporter FE240_01135 PF00528 Binding-protein-dependent transport system inner membrane component FE240_01155 PF00694 Aconitase C-terminal domain FE240_01160 PF00330 Aconitase family (aconitate hydratase) FE240_01165 PF00180 Isocitrate/isopropylmalate dehydrogenase FE240_01170 PF08502 LeuA allosteric (dimerisation) domain FE240_01170 PF00682 HMGL-like FE240_01190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE240_01190 PF00205 Thiamine pyrophosphate enzyme, central domain FE240_01190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE240_01195 PF10369 Small subunit of acetolactate synthase FE240_01200 PF12792 CSS motif domain associated with EAL FE240_01200 PF00563 EAL domain FE240_01205 PF00155 Aminotransferase class I and II FE240_01215 PF02390 Putative methyltransferase FE240_01220 PF04320 Protein with unknown function (DUF469) FE240_01225 PF04960 Glutaminase FE240_01230 PF00581 Rhodanese-like domain FE240_01235 PF01966 HD domain FE240_01240 PF00561 alpha/beta hydrolase fold FE240_01255 PF06877 Regulator of ribonuclease activity B FE240_01260 PF08448 PAS fold FE240_01260 PF00990 Diguanylate cyclase, GGDEF domain FE240_01260 PF00563 EAL domain FE240_01260 PF08447 PAS fold FE240_01280 PF09905 DNA-binding protein VF530 FE240_01285 PF02666 Phosphatidylserine decarboxylase FE240_01290 PF03193 RsgA GTPase FE240_01295 PF00929 Exonuclease FE240_01340 PF00480 ROK family FE240_01345 PF08331 Domain of unknown function (DUF1730) FE240_01350 PF03853 YjeF-related protein N-terminus FE240_01350 PF01256 Carbohydrate kinase FE240_01355 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FE240_01360 PF01520 N-acetylmuramoyl-L-alanine amidase FE240_01365 PF01119 DNA mismatch repair protein, C-terminal domain FE240_01365 PF08676 MutL C terminal dimerisation domain FE240_01375 PF17209 Hfq protein FE240_01380 PF16360 GTP-binding GTPase Middle Region FE240_01380 PF13167 GTP-binding GTPase N-terminal FE240_01380 PF01926 50S ribosome-binding GTPase FE240_01385 PF12221 Bacterial membrane protein N terminal FE240_01385 PF01145 SPFH domain / Band 7 family FE240_01390 PF01145 SPFH domain / Band 7 family FE240_01395 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FE240_01400 PF00348 Polyprenyl synthetase FE240_01405 PF00829 Ribosomal prokaryotic L21 protein FE240_01410 PF01016 Ribosomal L27 protein FE240_01415 PF01926 50S ribosome-binding GTPase FE240_01415 PF01018 GTP1/OBG FE240_01420 PF06738 Putative threonine/serine exporter FE240_01425 PF12821 Threonine/Serine exporter, ThrE FE240_01430 PF00186 Dihydrofolate reductase FE240_01435 PF00149 Calcineurin-like phosphoesterase FE240_01440 PF04379 ApaG domain FE240_01445 PF00398 Ribosomal RNA adenine dimethylase FE240_01450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FE240_01455 PF09312 SurA N-terminal domain FE240_01455 PF00639 PPIC-type PPIASE domain FE240_01460 PF04453 LPS transport system D FE240_01460 PF03968 OstA-like protein FE240_01465 PF01636 Phosphotransferase enzyme family FE240_01470 PF00483 Nucleotidyl transferase FE240_01475 PF05099 Tellurite resistance protein TerB FE240_01475 PF00226 DnaJ domain FE240_01480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE240_01480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE240_01490 PF01132 Elongation factor P (EF-P) OB domain FE240_01490 PF08207 Elongation factor P (EF-P) KOW-like domain FE240_01490 PF09285 Elongation factor P, C-terminal FE240_01500 PF00478 IMP dehydrogenase / GMP reductase domain FE240_01505 PF00072 Response regulator receiver domain FE240_01505 PF01584 CheW-like domain FE240_01510 PF08351 Domain of unknown function (DUF1726) FE240_01510 PF13718 GNAT acetyltransferase 2 FE240_01510 PF05127 Helicase FE240_01510 PF17176 tRNA-binding domain FE240_01520 PF04324 BFD-like [2Fe-2S] binding domain FE240_01525 PF00210 Ferritin-like domain FE240_01530 PF01053 Cys/Met metabolism PLP-dependent enzyme FE240_01550 PF00768 D-alanyl-D-alanine carboxypeptidase FE240_01555 PF09335 SNARE associated Golgi protein FE240_01560 PF00571 CBS domain FE240_01560 PF01595 Cyclin M transmembrane N-terminal domain FE240_01560 PF03471 Transporter associated domain FE240_01565 PF08264 Anticodon-binding domain of tRNA FE240_01565 PF00133 tRNA synthetases class I (I, L, M and V) FE240_01565 PF10458 Valyl tRNA synthetase tRNA binding arm FE240_01575 PF00883 Cytosol aminopeptidase family, catalytic domain FE240_01575 PF02789 Cytosol aminopeptidase family, N-terminal domain FE240_01580 PF03739 Lipopolysaccharide export system permease LptF/LptG FE240_01585 PF03739 Lipopolysaccharide export system permease LptF/LptG FE240_01600 PF00589 Phage integrase family FE240_01600 PF13356 Arm DNA-binding domain FE240_01630 PF13362 Toprim domain FE240_01630 PF08401 Domain of unknown function (DUF1738) FE240_01630 PF18818 Metallopeptidase superfamily domain FE240_01655 PF00909 Ammonium Transporter Family FE240_01660 PF05958 tRNA (Uracil-5-)-methyltransferase FE240_01660 PF01938 TRAM domain FE240_01665 PF01026 TatD related DNase FE240_01670 PF01773 Na+ dependent nucleoside transporter N-terminus FE240_01670 PF07662 Na+ dependent nucleoside transporter C-terminus FE240_01670 PF07670 Nucleoside recognition FE240_01680 PF01791 DeoC/LacD family aldolase FE240_01685 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FE240_01685 PF00591 Glycosyl transferase family, a/b domain FE240_01685 PF02885 Glycosyl transferase family, helical bundle domain FE240_01690 PF01676 Metalloenzyme superfamily FE240_01695 PF01048 Phosphorylase superfamily FE240_01710 PF18429 Domain of unknown function (DUF5609) FE240_01725 PF18073 Rubredoxin metal binding domain FE240_01730 PF03553 Na+/H+ antiporter family FE240_01770 PF00534 Glycosyl transferases group 1 FE240_01770 PF08323 Starch synthase catalytic domain FE240_01775 PF00483 Nucleotidyl transferase FE240_01780 PF05175 Methyltransferase small domain FE240_01780 PF08468 Methyltransferase small domain N-terminal FE240_01785 PF00701 Dihydrodipicolinate synthetase family FE240_01790 PF17209 Hfq protein FE240_01795 PF04403 Paraquat-inducible protein A FE240_01800 PF02470 MlaD protein FE240_01810 PF01389 OmpA-like transmembrane domain FE240_01810 PF00691 OmpA family FE240_01815 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FE240_01815 PF01464 Transglycosylase SLT domain FE240_01820 PF04362 Bacterial Fe(2+) trafficking FE240_01825 PF10576 Iron-sulfur binding domain of endonuclease III FE240_01825 PF00633 Helix-hairpin-helix motif FE240_01825 PF14815 NUDIX domain FE240_01825 PF00730 HhH-GPD superfamily base excision DNA repair protein FE240_01830 PF16537 Type II secretion system protein B FE240_01835 PF13401 AAA domain FE240_01835 PF01471 Putative peptidoglycan binding domain FE240_01840 PF01743 Poly A polymerase head domain FE240_01840 PF12627 Probable RNA and SrmB- binding site of polymerase A FE240_01840 PF01966 HD domain FE240_01845 PF01384 Phosphate transporter family FE240_01850 PF01865 Protein of unknown function DUF47 FE240_01860 PF03279 Bacterial lipid A biosynthesis acyltransferase FE240_01865 PF01467 Cytidylyltransferase-like FE240_01865 PF00294 pfkB family carbohydrate kinase FE240_01870 PF01541 GIY-YIG catalytic domain FE240_01875 PF00892 EamA-like transporter family FE240_01880 PF03167 Uracil DNA glycosylase superfamily FE240_01890 PF03466 LysR substrate binding domain FE240_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_01895 PF00950 ABC 3 transport family FE240_01900 PF00005 ABC transporter FE240_01905 PF01297 Zinc-uptake complex component A periplasmic FE240_01915 PF16868 NMT1-like family FE240_01925 PF08525 Opacity-associated protein A N-terminal motif FE240_01925 PF01551 Peptidase family M23 FE240_01925 PF01476 LysM domain FE240_01930 PF08240 Alcohol dehydrogenase GroES-like domain FE240_01930 PF00107 Zinc-binding dehydrogenase FE240_01935 PF09335 SNARE associated Golgi protein FE240_01940 PF00675 Insulinase (Peptidase family M16) FE240_01940 PF05193 Peptidase M16 inactive domain FE240_01945 PF04262 Glutamate-cysteine ligase FE240_01955 PF00501 AMP-binding enzyme FE240_01965 PF00583 Acetyltransferase (GNAT) family FE240_01975 PF12592 Protein of unknown function (DUF3763) FE240_01975 PF17868 AAA lid domain FE240_01975 PF07728 AAA domain (dynein-related subfamily) FE240_01980 PF05762 VWA domain containing CoxE-like protein FE240_01985 PF00990 Diguanylate cyclase, GGDEF domain FE240_01985 PF17151 Periplasmic sensor domain FE240_01990 PF16658 Class II release factor RF3, C-terminal domain FE240_01990 PF03144 Elongation factor Tu domain 2 FE240_01990 PF00009 Elongation factor Tu GTP binding domain FE240_02000 PF00583 Acetyltransferase (GNAT) family FE240_02005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE240_02015 PF03466 LysR substrate binding domain FE240_02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_02020 PF04371 Porphyromonas-type peptidyl-arginine deiminase FE240_02025 PF01425 Amidase FE240_02060 PF00271 Helicase conserved C-terminal domain FE240_02060 PF00270 DEAD/DEAH box helicase FE240_02065 PF02627 Carboxymuconolactone decarboxylase family FE240_02070 PF13411 MerR HTH family regulatory protein FE240_02090 PF00005 ABC transporter FE240_02090 PF12704 MacB-like periplasmic core domain FE240_02090 PF02687 FtsX-like permease family FE240_02095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_02100 PF00072 Response regulator receiver domain FE240_02100 PF00486 Transcriptional regulatory protein, C terminal FE240_02105 PF00512 His Kinase A (phospho-acceptor) domain FE240_02105 PF16750 Sensor domain of 2-component histidine kinase FE240_02105 PF00672 HAMP domain FE240_02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_02110 PF05977 Transmembrane secretion effector FE240_02115 PF02678 Pirin FE240_02115 PF17954 Quercetinase C-terminal cupin domain FE240_02120 PF07969 Amidohydrolase family FE240_02130 PF00857 Isochorismatase family FE240_02135 PF03466 LysR substrate binding domain FE240_02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_02140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE240_02145 PF12833 Helix-turn-helix domain FE240_02145 PF02311 AraC-like ligand binding domain FE240_02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_02175 PF00512 His Kinase A (phospho-acceptor) domain FE240_02185 PF00158 Sigma-54 interaction domain FE240_02185 PF00072 Response regulator receiver domain FE240_02190 PF06496 Protein of unknown function (DUF1097) FE240_02195 PF00174 Oxidoreductase molybdopterin binding domain FE240_02200 PF01794 Ferric reductase like transmembrane component FE240_02215 PF00072 Response regulator receiver domain FE240_02215 PF00486 Transcriptional regulatory protein, C terminal FE240_02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_02225 PF02540 NAD synthase FE240_02225 PF00795 Carbon-nitrogen hydrolase FE240_02230 PF00543 Nitrogen regulatory protein P-II FE240_02240 PF02664 S-Ribosylhomocysteinase (LuxS) FE240_02245 PF00990 Diguanylate cyclase, GGDEF domain FE240_02250 PF07859 alpha/beta hydrolase fold FE240_02255 PF17876 Cold shock domain FE240_02255 PF08206 Ribonuclease B OB domain FE240_02255 PF00773 RNB domain FE240_02255 PF00575 S1 RNA binding domain FE240_02255 PF08461 Ribonuclease R winged-helix domain FE240_02260 PF08032 RNA 2'-O ribose methyltransferase substrate binding FE240_02260 PF00588 SpoU rRNA Methylase family FE240_02270 PF13673 Acetyltransferase (GNAT) domain FE240_02295 PF03958 Bacterial type II/III secretion system short domain FE240_02295 PF07660 Secretin and TonB N terminus short domain FE240_02295 PF00263 Bacterial type II and III secretion system protein FE240_02295 PF11741 AMIN domain FE240_02300 PF01202 Shikimate kinase FE240_02305 PF01761 3-dehydroquinate synthase FE240_02315 PF02086 D12 class N6 adenine-specific DNA methyltransferase FE240_02320 PF00834 Ribulose-phosphate 3 epimerase family FE240_02325 PF13419 Haloacid dehalogenase-like hydrolase FE240_02330 PF00579 tRNA synthetases class I (W and Y) FE240_02340 PF00117 Glutamine amidotransferase class-I FE240_02345 PF00202 Aminotransferase class-III FE240_02350 PF04958 Arginine N-succinyltransferase beta subunit FE240_02355 PF00171 Aldehyde dehydrogenase family FE240_02370 PF13419 Haloacid dehalogenase-like hydrolase FE240_02375 PF00175 Oxidoreductase NAD-binding domain FE240_02375 PF00258 Flavodoxin FE240_02375 PF00667 FAD binding domain FE240_02380 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FE240_02380 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FE240_02385 PF01507 Phosphoadenosine phosphosulfate reductase family FE240_02395 PF00990 Diguanylate cyclase, GGDEF domain FE240_02395 PF17151 Periplasmic sensor domain FE240_02400 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FE240_02405 PF00528 Binding-protein-dependent transport system inner membrane component FE240_02410 PF00571 CBS domain FE240_02410 PF00005 ABC transporter FE240_02415 PF00296 Luciferase-like monooxygenase FE240_02430 PF07683 Cobalamin synthesis protein cobW C-terminal domain FE240_02430 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE240_02435 PF07690 Major Facilitator Superfamily FE240_02440 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FE240_02445 PF02152 Dihydroneopterin aldolase FE240_02450 PF02660 Glycerol-3-phosphate acyltransferase FE240_02480 PF07670 Nucleoside recognition FE240_02485 PF01810 LysE type translocator FE240_02495 PF04226 Transglycosylase associated protein FE240_02500 PF02313 Fumarate reductase subunit D FE240_02510 PF13183 4Fe-4S dicluster domain FE240_02510 PF13085 2Fe-2S iron-sulfur cluster binding domain FE240_02515 PF02910 Fumarate reductase flavoprotein C-term FE240_02515 PF00890 FAD binding domain FE240_02525 PF03009 Glycerophosphoryl diester phosphodiesterase family FE240_02530 PF12795 Mechanosensitive ion channel porin domain FE240_02530 PF12794 Mechanosensitive ion channel inner membrane domain 1 FE240_02530 PF00924 Mechanosensitive ion channel FE240_02535 PF01551 Peptidase family M23 FE240_02550 PF00271 Helicase conserved C-terminal domain FE240_02550 PF00270 DEAD/DEAH box helicase FE240_02555 PF05175 Methyltransferase small domain FE240_02560 PF05525 Branched-chain amino acid transport protein FE240_02575 PF01475 Ferric uptake regulator family FE240_02580 PF00361 Proton-conducting membrane transporter FE240_02585 PF00361 Proton-conducting membrane transporter FE240_02590 PF00361 Proton-conducting membrane transporter FE240_02590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FE240_02595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FE240_02600 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FE240_02605 PF12838 4Fe-4S dicluster domain FE240_02610 PF00146 NADH dehydrogenase FE240_02615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE240_02615 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FE240_02615 PF00384 Molybdopterin oxidoreductase FE240_02620 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FE240_02620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FE240_02630 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FE240_02630 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FE240_02635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE240_02640 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FE240_02645 PF00691 OmpA family FE240_02645 PF13677 Membrane MotB of proton-channel complex MotA/MotB FE240_02650 PF01618 MotA/TolQ/ExbB proton channel family FE240_02665 PF00072 Response regulator receiver domain FE240_02670 PF00854 POT family FE240_02675 PF00483 Nucleotidyl transferase FE240_02685 PF00459 Inositol monophosphatase family FE240_02690 PF03795 YCII-related domain FE240_02695 PF04279 Intracellular septation protein A FE240_02700 PF00282 Pyridoxal-dependent decarboxylase conserved domain FE240_02705 PF02080 TrkA-C domain FE240_02705 PF06826 Predicted Permease Membrane Region FE240_02715 PF00313 'Cold-shock' DNA-binding domain FE240_02725 PF00672 HAMP domain FE240_02725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_02730 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE240_02760 PF06483 Chitinase C FE240_02760 PF00704 Glycosyl hydrolases family 18 FE240_02765 PF01584 CheW-like domain FE240_02765 PF00072 Response regulator receiver domain FE240_02770 PF13472 GDSL-like Lipase/Acylhydrolase family FE240_02775 PF00005 ABC transporter FE240_02785 PF01370 NAD dependent epimerase/dehydratase family FE240_02785 PF08338 Domain of unknown function (DUF1731) FE240_02790 PF01515 Phosphate acetyl/butaryl transferase FE240_02790 PF07085 DRTGG domain FE240_02795 PF00871 Acetokinase family FE240_02800 PF04217 Protein of unknown function, DUF412 FE240_02805 PF03887 YfbU domain FE240_02810 PF00578 AhpC/TSA family FE240_02815 PF01842 ACT domain FE240_02820 PF00701 Dihydrodipicolinate synthetase family FE240_02825 PF06804 NlpB/DapX lipoprotein FE240_02830 PF01259 SAICAR synthetase FE240_02835 PF02780 Transketolase, C-terminal domain FE240_02835 PF02779 Transketolase, pyrimidine binding domain FE240_02835 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FE240_02840 PF00348 Polyprenyl synthetase FE240_02845 PF02609 Exonuclease VII small subunit FE240_02850 PF01618 MotA/TolQ/ExbB proton channel family FE240_02855 PF13677 Membrane MotB of proton-channel complex MotA/MotB FE240_02855 PF00691 OmpA family FE240_02860 PF01272 Transcription elongation factor, GreA/GreB, C-term FE240_02860 PF03449 Transcription elongation factor, N-terminal FE240_02870 PF01985 CRS1 / YhbY (CRM) domain FE240_02875 PF01728 FtsJ-like methyltransferase FE240_02880 PF06480 FtsH Extracellular FE240_02880 PF01434 Peptidase family M41 FE240_02880 PF00004 ATPase family associated with various cellular activities (AAA) FE240_02880 PF17862 AAA+ lid domain FE240_02885 PF00809 Pterin binding enzyme FE240_02890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FE240_02890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FE240_02890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FE240_02890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FE240_02895 PF03840 Preprotein translocase SecG subunit FE240_02910 PF17384 RimP C-terminal SH3 domain FE240_02910 PF02576 RimP N-terminal domain FE240_02915 PF08529 NusA N-terminal domain FE240_02915 PF00575 S1 RNA binding domain FE240_02915 PF13184 NusA-like KH domain FE240_02920 PF04760 Translation initiation factor IF-2, N-terminal region FE240_02920 PF00009 Elongation factor Tu GTP binding domain FE240_02920 PF11987 Translation-initiation factor 2 FE240_02920 PF08364 Bacterial translation initiation factor IF-2 associated region FE240_02925 PF02033 Ribosome-binding factor A FE240_02930 PF01509 TruB family pseudouridylate synthase (N terminal domain) FE240_02930 PF16198 tRNA pseudouridylate synthase B C-terminal domain FE240_02930 PF09157 Pseudouridine synthase II TruB, C-terminal FE240_02935 PF00312 Ribosomal protein S15 FE240_02940 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FE240_02940 PF01138 3' exoribonuclease family, domain 1 FE240_02940 PF00575 S1 RNA binding domain FE240_02940 PF03725 3' exoribonuclease family, domain 2 FE240_02940 PF00013 KH domain FE240_02945 PF00700 Bacterial flagellin C-terminal helical region FE240_02945 PF00669 Bacterial flagellin N-terminal helical region FE240_02950 PF07195 Flagellar hook-associated protein 2 C-terminus FE240_02950 PF07196 Flagellin hook IN motif FE240_02950 PF02465 Flagellar hook-associated protein 2 N-terminus FE240_02965 PF03466 LysR substrate binding domain FE240_02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_02985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_02985 PF00672 HAMP domain FE240_02985 PF02743 Cache domain FE240_02995 PF02272 DHHA1 domain FE240_02995 PF01411 tRNA synthetases class II (A) FE240_02995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FE240_03005 PF00155 Aminotransferase class I and II FE240_03005 PF00392 Bacterial regulatory proteins, gntR family FE240_03020 PF01177 Asp/Glu/Hydantoin racemase FE240_03030 PF04074 YhcH/YjgK/YiaL FE240_03035 PF00871 Acetokinase family FE240_03040 PF06821 Serine hydrolase FE240_03045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FE240_03045 PF04055 Radical SAM superfamily FE240_03050 PF03099 Biotin/lipoate A/B protein ligase family FE240_03055 PF04359 Protein of unknown function (DUF493) FE240_03060 PF00768 D-alanyl-D-alanine carboxypeptidase FE240_03060 PF07943 Penicillin-binding protein 5, C-terminal domain FE240_03065 PF03330 Lytic transglycolase FE240_03065 PF05036 Sporulation related domain FE240_03070 PF01098 Cell cycle protein FE240_03075 PF00905 Penicillin binding protein transpeptidase domain FE240_03075 PF03717 Penicillin-binding Protein dimerisation domain FE240_03080 PF02590 Predicted SPOUT methyltransferase FE240_03090 PF01467 Cytidylyltransferase-like FE240_03095 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FE240_03095 PF06144 DNA polymerase III, delta subunit FE240_03100 PF04390 Lipopolysaccharide-assembly FE240_03105 PF00133 tRNA synthetases class I (I, L, M and V) FE240_03105 PF08264 Anticodon-binding domain of tRNA FE240_03105 PF13603 Leucyl-tRNA synthetase, Domain 2 FE240_03115 PF00795 Carbon-nitrogen hydrolase FE240_03120 PF00571 CBS domain FE240_03120 PF03471 Transporter associated domain FE240_03125 PF02130 Uncharacterized protein family UPF0054 FE240_03130 PF02562 PhoH-like protein FE240_03135 PF04055 Radical SAM superfamily FE240_03135 PF01938 TRAM domain FE240_03135 PF00919 Uncharacterized protein family UPF0004 FE240_03140 PF01494 FAD binding domain FE240_03145 PF02142 MGS-like domain FE240_03155 PF00710 Asparaginase, N-terminal FE240_03155 PF17763 Glutaminase/Asparaginase C-terminal domain FE240_03170 PF00356 Bacterial regulatory proteins, lacI family FE240_03175 PF02378 Phosphotransferase system, EIIC FE240_03175 PF00367 phosphotransferase system, EIIB FE240_03180 PF00128 Alpha amylase, catalytic domain FE240_03180 PF11941 Domain of unknown function (DUF3459) FE240_03185 PF12464 Maltose acetyltransferase FE240_03185 PF14602 Hexapeptide repeat of succinyl-transferase FE240_03210 PF13520 Amino acid permease FE240_03215 PF00128 Alpha amylase, catalytic domain FE240_03230 PF00535 Glycosyl transferase family 2 FE240_03240 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_03245 PF01471 Putative peptidoglycan binding domain FE240_03245 PF03734 L,D-transpeptidase catalytic domain FE240_03250 PF05951 Bacterial protein of unknown function (DUF882) FE240_03260 PF03458 UPF0126 domain FE240_03270 PF06470 SMC proteins Flexible Hinge Domain FE240_03270 PF02463 RecF/RecN/SMC N terminal domain FE240_03275 PF04354 ZipA, C-terminal FtsZ-binding domain FE240_03280 PF01653 NAD-dependent DNA ligase adenylation domain FE240_03280 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FE240_03280 PF00533 BRCA1 C Terminus (BRCT) domain FE240_03280 PF12826 Helix-hairpin-helix motif FE240_03280 PF03120 NAD-dependent DNA ligase OB-fold domain FE240_03290 PF03477 ATP cone domain FE240_03290 PF13597 Anaerobic ribonucleoside-triphosphate reductase FE240_03300 PF07687 Peptidase dimerisation domain FE240_03300 PF01546 Peptidase family M20/M25/M40 FE240_03305 PF00156 Phosphoribosyl transferase domain FE240_03310 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) FE240_03315 PF07417 Sigma factor-binding transcriptional regulator Crl FE240_03320 PF01472 PUA domain FE240_03320 PF00696 Amino acid kinase family FE240_03325 PF00171 Aldehyde dehydrogenase family FE240_03335 PF00582 Universal stress protein family FE240_03350 PF00294 pfkB family carbohydrate kinase FE240_03355 PF04227 Indigoidine synthase A like protein FE240_03360 PF00194 Eukaryotic-type carbonic anhydrase FE240_03365 PF00994 Probable molybdopterin binding domain FE240_03375 PF00860 Permease family FE240_03385 PF12848 ABC transporter FE240_03385 PF00005 ABC transporter FE240_03390 PF01464 Transglycosylase SLT domain FE240_03395 PF00535 Glycosyl transferase family 2 FE240_03410 PF01370 NAD dependent epimerase/dehydratase family FE240_03420 PF00005 ABC transporter FE240_03425 PF01032 FecCD transport family FE240_03430 PF01497 Periplasmic binding protein FE240_03435 PF06228 Haem utilisation ChuX/HutX FE240_03440 PF01243 Pyridoxamine 5'-phosphate oxidase FE240_03445 PF14525 AraC-binding-like domain FE240_03445 PF12833 Helix-turn-helix domain FE240_03450 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FE240_03450 PF00355 Rieske [2Fe-2S] domain FE240_03455 PF00866 Ring hydroxylating beta subunit FE240_03460 PF00970 Oxidoreductase FAD-binding domain FE240_03460 PF00175 Oxidoreductase NAD-binding domain FE240_03460 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_03465 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE240_03465 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FE240_03470 PF00682 HMGL-like FE240_03470 PF07836 DmpG-like communication domain FE240_03480 PF01361 Tautomerase enzyme FE240_03485 PF00970 Oxidoreductase FAD-binding domain FE240_03485 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_03485 PF00175 Oxidoreductase NAD-binding domain FE240_03490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE240_03495 PF00171 Aldehyde dehydrogenase family FE240_03520 PF07715 TonB-dependent Receptor Plug Domain FE240_03520 PF00593 TonB dependent receptor FE240_03525 PF12832 MFS_1 like family FE240_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_03530 PF00512 His Kinase A (phospho-acceptor) domain FE240_03535 PF08329 Chitinase A, N-terminal domain FE240_03535 PF00704 Glycosyl hydrolases family 18 FE240_03540 PF03129 Anticodon binding domain FE240_03540 PF04073 Aminoacyl-tRNA editing domain FE240_03540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE240_03550 PF07499 RuvA, C-terminal domain FE240_03550 PF01330 RuvA N terminal domain FE240_03555 PF05496 Holliday junction DNA helicase RuvB P-loop domain FE240_03555 PF05491 RuvB C-terminal winged helix domain FE240_03555 PF17864 RuvB AAA lid domain FE240_03560 PF01654 Cytochrome bd terminal oxidase subunit I FE240_03565 PF02322 Cytochrome bd terminal oxidase subunit II FE240_03570 PF08173 Membrane bound YbgT-like protein FE240_03580 PF03061 Thioesterase superfamily FE240_03585 PF01618 MotA/TolQ/ExbB proton channel family FE240_03590 PF02472 Biopolymer transport protein ExbD/TolR FE240_03595 PF06519 TolA C-terminal FE240_03600 PF07676 WD40-like Beta Propeller Repeat FE240_03600 PF04052 TolB amino-terminal domain FE240_03605 PF00691 OmpA family FE240_03610 PF13174 Tetratricopeptide repeat FE240_03610 PF16331 TolA binding protein trimerisation FE240_03680 PF00672 HAMP domain FE240_03680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_03685 PF02445 Quinolinate synthetase A protein FE240_03690 PF01263 Aldose 1-epimerase FE240_03695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FE240_03695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FE240_03700 PF02446 4-alpha-glucanotransferase FE240_03705 PF00128 Alpha amylase, catalytic domain FE240_03705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FE240_03705 PF02806 Alpha amylase, C-terminal all-beta domain FE240_03710 PF00128 Alpha amylase, catalytic domain FE240_03710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FE240_03715 PF01641 SelR domain FE240_03725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FE240_03725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FE240_03730 PF07023 Protein of unknown function (DUF1315) FE240_03735 PF00710 Asparaginase, N-terminal FE240_03735 PF17763 Glutaminase/Asparaginase C-terminal domain FE240_03740 PF03616 Sodium/glutamate symporter FE240_03745 PF01343 Peptidase family S49 FE240_03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_03750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE240_03755 PF00881 Nitroreductase family FE240_03760 PF01037 Lrp/AsnC ligand binding domain FE240_03760 PF13404 AsnC-type helix-turn-helix domain FE240_03770 PF00474 Sodium:solute symporter family FE240_03790 PF00202 Aminotransferase class-III FE240_03795 PF00654 Voltage gated chloride channel FE240_03805 PF01521 Iron-sulphur cluster biosynthesis FE240_03830 PF13607 Succinyl-CoA ligase like flavodoxin domain FE240_03830 PF13380 CoA binding domain FE240_03830 PF00583 Acetyltransferase (GNAT) family FE240_03850 PF02954 Bacterial regulatory protein, Fis family FE240_03855 PF01207 Dihydrouridine synthase (Dus) FE240_03865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_03880 PF01699 Sodium/calcium exchanger protein FE240_03890 PF01258 Prokaryotic dksA/traR C4-type zinc finger FE240_03895 PF17746 SfsA N-terminal OB domain FE240_03895 PF03749 Sugar fermentation stimulation protein RE domain FE240_03900 PF02834 LigT like Phosphoesterase FE240_03905 PF00271 Helicase conserved C-terminal domain FE240_03905 PF00270 DEAD/DEAH box helicase FE240_03905 PF04408 Helicase associated domain (HA2) FE240_03905 PF08482 ATP-dependent helicase C-terminal FE240_03910 PF14814 Bifunctional transglycosylase second domain FE240_03910 PF00905 Penicillin binding protein transpeptidase domain FE240_03910 PF00912 Transglycosylase FE240_03915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE240_03925 PF01569 PAP2 superfamily FE240_03945 PF12838 4Fe-4S dicluster domain FE240_03950 PF01136 Peptidase family U32 FE240_03950 PF16325 Peptidase family U32 C-terminal domain FE240_03955 PF00990 Diguanylate cyclase, GGDEF domain FE240_03955 PF01590 GAF domain FE240_03955 PF00989 PAS fold FE240_03955 PF00563 EAL domain FE240_03960 PF02690 Na+/Pi-cotransporter FE240_03970 PF13520 Amino acid permease FE240_03975 PF00324 Amino acid permease FE240_03980 PF00202 Aminotransferase class-III FE240_03985 PF00171 Aldehyde dehydrogenase family FE240_03990 PF00120 Glutamine synthetase, catalytic domain FE240_03995 PF01266 FAD dependent oxidoreductase FE240_04000 PF02378 Phosphotransferase system, EIIC FE240_04000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE240_04000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE240_04010 PF01238 Phosphomannose isomerase type I FE240_04015 PF12833 Helix-turn-helix domain FE240_04025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE240_04035 PF01679 Proteolipid membrane potential modulator FE240_04045 PF00816 H-NS histone family FE240_04050 PF00924 Mechanosensitive ion channel FE240_04050 PF12795 Mechanosensitive ion channel porin domain FE240_04050 PF12794 Mechanosensitive ion channel inner membrane domain 1 FE240_04055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FE240_04060 PF02896 PEP-utilising enzyme, TIM barrel domain FE240_04060 PF05524 PEP-utilising enzyme, N-terminal FE240_04060 PF00391 PEP-utilising enzyme, mobile domain FE240_04065 PF00381 PTS HPr component phosphorylation site FE240_04070 PF00291 Pyridoxal-phosphate dependent enzyme FE240_04080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FE240_04080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FE240_04085 PF01980 tRNA-methyltransferase O FE240_04085 PF18389 TrmO C-terminal domain FE240_04100 PF00005 ABC transporter FE240_04100 PF00664 ABC transporter transmembrane region FE240_04105 PF00664 ABC transporter transmembrane region FE240_04105 PF00005 ABC transporter FE240_04120 PF00072 Response regulator receiver domain FE240_04120 PF00486 Transcriptional regulatory protein, C terminal FE240_04130 PF03737 Aldolase/RraA FE240_04140 PF16177 Acetyl-coenzyme A synthetase N-terminus FE240_04140 PF00501 AMP-binding enzyme FE240_04140 PF13193 AMP-binding enzyme C-terminal domain FE240_04145 PF00563 EAL domain FE240_04145 PF00990 Diguanylate cyclase, GGDEF domain FE240_04145 PF03707 Bacterial signalling protein N terminal repeat FE240_04150 PF00990 Diguanylate cyclase, GGDEF domain FE240_04150 PF13426 PAS domain FE240_04150 PF00563 EAL domain FE240_04160 PF02613 Nitrate reductase delta subunit FE240_04175 PF00464 Serine hydroxymethyltransferase FE240_04180 PF03477 ATP cone domain FE240_04185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FE240_04185 PF01872 RibD C-terminal domain FE240_04190 PF00677 Lumazine binding domain FE240_04195 PF00925 GTP cyclohydrolase II FE240_04195 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FE240_04200 PF00885 6,7-dimethyl-8-ribityllumazine synthase FE240_04205 PF01029 NusB family FE240_04210 PF00586 AIR synthase related protein, N-terminal domain FE240_04210 PF02769 AIR synthase related protein, C-terminal domain FE240_04215 PF04608 Phosphatidylglycerophosphatase A FE240_04220 PF00005 ABC transporter FE240_04220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE240_04225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_04230 PF00528 Binding-protein-dependent transport system inner membrane component FE240_04235 PF00528 Binding-protein-dependent transport system inner membrane component FE240_04235 PF12911 N-terminal TM domain of oligopeptide transport permease C FE240_04240 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FE240_04260 PF03702 Anhydro-N-acetylmuramic acid kinase FE240_04265 PF01476 LysM domain FE240_04265 PF01551 Peptidase family M23 FE240_04265 PF08525 Opacity-associated protein A N-terminal motif FE240_04270 PF00579 tRNA synthetases class I (W and Y) FE240_04285 PF00196 Bacterial regulatory proteins, luxR family FE240_04285 PF00072 Response regulator receiver domain FE240_04305 PF00877 NlpC/P60 family FE240_04315 PF00440 Bacterial regulatory proteins, tetR family FE240_04315 PF08361 MAATS-type transcriptional repressor, C-terminal region FE240_04320 PF00529 HlyD membrane-fusion protein of T1SS FE240_04320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_04325 PF00873 AcrB/AcrD/AcrF family FE240_04330 PF00990 Diguanylate cyclase, GGDEF domain FE240_04335 PF01238 Phosphomannose isomerase type I FE240_04345 PF02378 Phosphotransferase system, EIIC FE240_04355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE240_04360 PF02378 Phosphotransferase system, EIIC FE240_04365 PF00232 Glycosyl hydrolase family 1 FE240_04370 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FE240_04375 PF00480 ROK family FE240_04380 PF02264 LamB porin FE240_04390 PF16990 Carbohydrate binding module (family 35) FE240_04390 PF03422 Carbohydrate binding module (family 6) FE240_04390 PF13199 Glycosyl hydrolase family 66 FE240_04395 PF02013 Cellulose or protein binding domain FE240_04395 PF00150 Cellulase (glycosyl hydrolase family 5) FE240_04400 PF00356 Bacterial regulatory proteins, lacI family FE240_04410 PF00290 Tryptophan synthase alpha chain FE240_04415 PF00291 Pyridoxal-phosphate dependent enzyme FE240_04420 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FE240_04420 PF00218 Indole-3-glycerol phosphate synthase FE240_04425 PF00591 Glycosyl transferase family, a/b domain FE240_04425 PF02885 Glycosyl transferase family, helical bundle domain FE240_04430 PF00591 Glycosyl transferase family, a/b domain FE240_04430 PF02885 Glycosyl transferase family, helical bundle domain FE240_04430 PF00117 Glutamine amidotransferase class-I FE240_04435 PF04715 Anthranilate synthase component I, N terminal region FE240_04435 PF00425 chorismate binding enzyme FE240_04440 PF18152 DAHP synthase ferredoxin-like domain FE240_04440 PF00793 DAHP synthetase I family FE240_04445 PF02811 PHP domain FE240_04450 PF01300 Telomere recombination FE240_04455 PF02616 Segregation and condensation protein ScpA FE240_04460 PF04079 Segregation and condensation complex subunit ScpB FE240_04465 PF01479 S4 domain FE240_04465 PF00849 RNA pseudouridylate synthase FE240_04490 PF00924 Mechanosensitive ion channel FE240_04495 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FE240_04505 PF12848 ABC transporter FE240_04505 PF00005 ABC transporter FE240_04520 PF16200 C-terminal region of band_7 FE240_04520 PF01145 SPFH domain / Band 7 family FE240_04525 PF04324 BFD-like [2Fe-2S] binding domain FE240_04525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE240_04525 PF00384 Molybdopterin oxidoreductase FE240_04525 PF01568 Molydopterin dinucleotide binding domain FE240_04535 PF00005 ABC transporter FE240_04540 PF00528 Binding-protein-dependent transport system inner membrane component FE240_04545 PF00005 ABC transporter FE240_04550 PF18267 Rubredoxin NAD+ reductase C-terminal domain FE240_04550 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_04550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FE240_04550 PF13806 Rieske-like [2Fe-2S] domain FE240_04550 PF04324 BFD-like [2Fe-2S] binding domain FE240_04550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FE240_04555 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_04555 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FE240_04555 PF18267 Rubredoxin NAD+ reductase C-terminal domain FE240_04555 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FE240_04555 PF04324 BFD-like [2Fe-2S] binding domain FE240_04555 PF13806 Rieske-like [2Fe-2S] domain FE240_04560 PF10414 Sirohaem synthase dimerisation region FE240_04560 PF14824 Sirohaem biosynthesis protein central FE240_04560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FE240_04565 PF01507 Phosphoadenosine phosphosulfate reductase family FE240_04570 PF00009 Elongation factor Tu GTP binding domain FE240_04575 PF03600 Citrate transporter FE240_04575 PF02080 TrkA-C domain FE240_04600 PF13737 Transposase DDE domain FE240_04605 PF13657 HipA N-terminal domain FE240_04605 PF07804 HipA-like C-terminal domain FE240_04610 PF01381 Helix-turn-helix FE240_04615 PF03279 Bacterial lipid A biosynthesis acyltransferase FE240_04635 PF00005 ABC transporter FE240_04650 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FE240_04665 PF00719 Inorganic pyrophosphatase FE240_04670 PF02875 Mur ligase family, glutamate ligase domain FE240_04670 PF01225 Mur ligase family, catalytic domain FE240_04670 PF08245 Mur ligase middle domain FE240_04675 PF02441 Flavoprotein FE240_04680 PF00440 Bacterial regulatory proteins, tetR family FE240_04685 PF00156 Phosphoribosyl transferase domain FE240_04690 PF00005 ABC transporter FE240_04695 PF01061 ABC-2 type transporter FE240_04700 PF02569 Pantoate-beta-alanine ligase FE240_04705 PF02548 Ketopantoate hydroxymethyltransferase FE240_04710 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FE240_04715 PF12626 Polymerase A arginine-rich C-terminus FE240_04715 PF12627 Probable RNA and SrmB- binding site of polymerase A FE240_04715 PF01743 Poly A polymerase head domain FE240_04720 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE240_04725 PF00367 phosphotransferase system, EIIB FE240_04725 PF02378 Phosphotransferase system, EIIC FE240_04725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FE240_04730 PF00474 Sodium:solute symporter family FE240_04740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE240_04740 PF00289 Biotin carboxylase, N-terminal domain FE240_04740 PF02785 Biotin carboxylase C-terminal domain FE240_04745 PF00364 Biotin-requiring enzyme FE240_04750 PF01220 Dehydroquinase class II FE240_04760 PF01966 HD domain FE240_04765 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FE240_04770 PF00588 SpoU rRNA Methylase family FE240_04775 PF01842 ACT domain FE240_04775 PF03447 Homoserine dehydrogenase, NAD binding domain FE240_04775 PF13840 ACT domain FE240_04775 PF00742 Homoserine dehydrogenase FE240_04775 PF00696 Amino acid kinase family FE240_04780 PF08544 GHMP kinases C terminal FE240_04780 PF00288 GHMP kinases N terminal domain FE240_04785 PF14821 Threonine synthase N terminus FE240_04785 PF00291 Pyridoxal-phosphate dependent enzyme FE240_04795 PF01047 MarR family FE240_04800 PF00072 Response regulator receiver domain FE240_04800 PF01627 Hpt domain FE240_04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_04800 PF00989 PAS fold FE240_04800 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_04800 PF00512 His Kinase A (phospho-acceptor) domain FE240_04805 PF07715 TonB-dependent Receptor Plug Domain FE240_04805 PF00593 TonB dependent receptor FE240_04815 PF00873 AcrB/AcrD/AcrF family FE240_04820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_04820 PF00529 HlyD membrane-fusion protein of T1SS FE240_04825 PF00486 Transcriptional regulatory protein, C terminal FE240_04825 PF00072 Response regulator receiver domain FE240_04830 PF00672 HAMP domain FE240_04830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_04830 PF00512 His Kinase A (phospho-acceptor) domain FE240_04840 PF00722 Glycosyl hydrolases family 16 FE240_04845 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FE240_04850 PF00232 Glycosyl hydrolase family 1 FE240_04855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE240_04855 PF02378 Phosphotransferase system, EIIC FE240_04860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE240_04865 PF02927 Cellulase N-terminal ig-like domain FE240_04865 PF00759 Glycosyl hydrolase family 9 FE240_04865 PF00404 Dockerin type I domain FE240_04865 PF02018 Carbohydrate binding domain FE240_04870 PF00933 Glycosyl hydrolase family 3 N terminal domain FE240_04870 PF14310 Fibronectin type III-like domain FE240_04870 PF01915 Glycosyl hydrolase family 3 C-terminal domain FE240_04875 PF13416 Bacterial extracellular solute-binding protein FE240_04880 PF00356 Bacterial regulatory proteins, lacI family FE240_04900 PF00916 Sulfate permease family FE240_04900 PF01740 STAS domain FE240_04910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_04910 PF03466 LysR substrate binding domain FE240_04915 PF07690 Major Facilitator Superfamily FE240_04920 PF07883 Cupin domain FE240_04925 PF01557 Fumarylacetoacetate (FAA) hydrolase family FE240_04930 PF14497 Glutathione S-transferase, C-terminal domain FE240_04930 PF02798 Glutathione S-transferase, N-terminal domain FE240_04935 PF01494 FAD binding domain FE240_04940 PF00672 HAMP domain FE240_04940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_04945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_04945 PF00672 HAMP domain FE240_04945 PF12729 Four helix bundle sensory module for signal transduction FE240_04950 PF11999 Protein of unknown function (DUF3494) FE240_04950 PF02368 Bacterial Ig-like domain (group 2) FE240_04960 PF13737 Transposase DDE domain FE240_04965 PF13460 NAD(P)H-binding FE240_04970 PF04355 SmpA / OmlA family FE240_04975 PF00465 Iron-containing alcohol dehydrogenase FE240_04980 PF01048 Phosphorylase superfamily FE240_04995 PF02463 RecF/RecN/SMC N terminal domain FE240_05000 PF01513 ATP-NAD kinase FE240_05005 PF01025 GrpE FE240_05010 PF00012 Hsp70 protein FE240_05015 PF00226 DnaJ domain FE240_05015 PF01556 DnaJ C terminal domain FE240_05015 PF00684 DnaJ central domain FE240_05020 PF02264 LamB porin FE240_05020 PF11471 Maltoporin periplasmic N-terminal extension FE240_05025 PF00294 pfkB family carbohydrate kinase FE240_05030 PF02378 Phosphotransferase system, EIIC FE240_05030 PF00367 phosphotransferase system, EIIB FE240_05035 PF00251 Glycosyl hydrolases family 32 N-terminal domain FE240_05035 PF08244 Glycosyl hydrolases family 32 C terminal FE240_05040 PF13407 Periplasmic binding protein domain FE240_05040 PF00356 Bacterial regulatory proteins, lacI family FE240_05045 PF02308 MgtC family FE240_05055 PF01545 Cation efflux family FE240_05070 PF04143 Sulphur transport FE240_05080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_05085 PF00873 AcrB/AcrD/AcrF family FE240_05090 PF10437 Bacterial lipoate protein ligase C-terminus FE240_05090 PF03099 Biotin/lipoate A/B protein ligase family FE240_05100 PF00593 TonB dependent receptor FE240_05100 PF07715 TonB-dependent Receptor Plug Domain FE240_05105 PF12833 Helix-turn-helix domain FE240_05110 PF07722 Peptidase C26 FE240_05115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE240_05120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FE240_05135 PF13396 Phospholipase_D-nuclease N-terminal FE240_05135 PF13091 PLD-like domain FE240_05145 PF00551 Formyl transferase FE240_05145 PF01842 ACT domain FE240_05150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FE240_05160 PF00085 Thioredoxin FE240_05165 PF01648 4'-phosphopantetheinyl transferase superfamily FE240_05170 PF00877 NlpC/P60 family FE240_05175 PF05971 RNA methyltransferase FE240_05180 PF01575 MaoC like domain FE240_05190 PF03453 MoeA N-terminal region (domain I and II) FE240_05190 PF03454 MoeA C-terminal region (domain IV) FE240_05190 PF00994 Probable molybdopterin binding domain FE240_05195 PF12804 MobA-like NTP transferase domain FE240_05200 PF00005 ABC transporter FE240_05205 PF00528 Binding-protein-dependent transport system inner membrane component FE240_05210 PF12849 PBP superfamily domain FE240_05215 PF02954 Bacterial regulatory protein, Fis family FE240_05215 PF00158 Sigma-54 interaction domain FE240_05215 PF00072 Response regulator receiver domain FE240_05220 PF00989 PAS fold FE240_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_05220 PF00512 His Kinase A (phospho-acceptor) domain FE240_05230 PF02634 FdhD/NarQ family FE240_05260 PF01568 Molydopterin dinucleotide binding domain FE240_05260 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FE240_05260 PF12838 4Fe-4S dicluster domain FE240_05260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE240_05260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE240_05260 PF00384 Molybdopterin oxidoreductase FE240_05260 PF00384 Molybdopterin oxidoreductase FE240_05260 PF01568 Molydopterin dinucleotide binding domain FE240_05260 PF12838 4Fe-4S dicluster domain FE240_05260 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FE240_05265 PF13247 4Fe-4S dicluster domain FE240_05275 PF00873 AcrB/AcrD/AcrF family FE240_05280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_05295 PF01161 Phosphatidylethanolamine-binding protein FE240_05300 PF03372 Endonuclease/Exonuclease/phosphatase family FE240_05320 PF01627 Hpt domain FE240_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_05320 PF00512 His Kinase A (phospho-acceptor) domain FE240_05320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FE240_05320 PF00672 HAMP domain FE240_05320 PF00072 Response regulator receiver domain FE240_05330 PF07509 Protein of unknown function (DUF1523) FE240_05335 PF01810 LysE type translocator FE240_05345 PF02080 TrkA-C domain FE240_05345 PF00999 Sodium/hydrogen exchanger family FE240_05345 PF03471 Transporter associated domain FE240_05355 PF02557 D-alanyl-D-alanine carboxypeptidase FE240_05360 PF01546 Peptidase family M20/M25/M40 FE240_05360 PF07687 Peptidase dimerisation domain FE240_05365 PF03960 ArsC family FE240_05370 PF00334 Nucleoside diphosphate kinase FE240_05375 PF04055 Radical SAM superfamily FE240_05385 PF13464 Domain of unknown function (DUF4115) FE240_05390 PF04551 GcpE protein FE240_05395 PF13393 Histidyl-tRNA synthetase FE240_05395 PF03129 Anticodon binding domain FE240_05400 PF09976 Tetratricopeptide repeat-like domain FE240_05405 PF13360 PQQ-like domain FE240_05410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FE240_05410 PF01926 50S ribosome-binding GTPase FE240_05415 PF07191 zinc-ribbons FE240_05420 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_05420 PF01464 Transglycosylase SLT domain FE240_05425 PF02769 AIR synthase related protein, C-terminal domain FE240_05425 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FE240_05425 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FE240_05430 PF00563 EAL domain FE240_05430 PF00990 Diguanylate cyclase, GGDEF domain FE240_05430 PF03707 Bacterial signalling protein N terminal repeat FE240_05435 PF00155 Aminotransferase class I and II FE240_05445 PF00462 Glutaredoxin FE240_05450 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FE240_05455 PF00271 Helicase conserved C-terminal domain FE240_05455 PF04851 Type III restriction enzyme, res subunit FE240_05460 PF00529 HlyD membrane-fusion protein of T1SS FE240_05460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_05465 PF11742 Protein of unknown function (DUF3302) FE240_05470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FE240_05470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FE240_05500 PF14437 MafB19-like deaminase FE240_05505 PF00271 Helicase conserved C-terminal domain FE240_05505 PF12419 SNF2 Helicase protein FE240_05505 PF00176 SNF2 family N-terminal domain FE240_05520 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FE240_05525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_05530 PF00072 Response regulator receiver domain FE240_05530 PF00486 Transcriptional regulatory protein, C terminal FE240_05535 PF00258 Flavodoxin FE240_05540 PF01402 Ribbon-helix-helix protein, copG family FE240_05550 PF12697 Alpha/beta hydrolase family FE240_05555 PF17206 SeqA protein N-terminal domain FE240_05555 PF03925 SeqA protein C-terminal domain FE240_05560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FE240_05560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FE240_05560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FE240_05560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FE240_05565 PF00884 Sulfatase FE240_05565 PF08019 Phosphoethanolamine transferase EptA/EptB FE240_05570 PF03974 Ecotin FE240_05590 PF01966 HD domain FE240_05590 PF11871 Domain of unknown function (DUF3391) FE240_05595 PF00849 RNA pseudouridylate synthase FE240_05595 PF01479 S4 domain FE240_05605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_05610 PF12850 Calcineurin-like phosphoesterase superfamily domain FE240_05630 PF01584 CheW-like domain FE240_05630 PF00072 Response regulator receiver domain FE240_05635 PF01739 CheR methyltransferase, SAM binding domain FE240_05635 PF03705 CheR methyltransferase, all-alpha domain FE240_05640 PF00460 Flagella basal body rod protein FE240_05645 PF00460 Flagella basal body rod protein FE240_05645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_05655 PF07559 Flagellar basal body protein FlaE FE240_05655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_05655 PF00460 Flagella basal body rod protein FE240_05660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_05660 PF00460 Flagella basal body rod protein FE240_05665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_05665 PF00460 Flagella basal body rod protein FE240_05670 PF02107 Flagellar L-ring protein FE240_05675 PF02119 Flagellar P-ring protein FE240_05680 PF10135 Rod binding protein FE240_05680 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FE240_05685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_05685 PF00460 Flagella basal body rod protein FE240_05690 PF00669 Bacterial flagellin N-terminal helical region FE240_05695 PF00669 Bacterial flagellin N-terminal helical region FE240_05695 PF07196 Flagellin hook IN motif FE240_05695 PF00700 Bacterial flagellin C-terminal helical region FE240_05700 PF00669 Bacterial flagellin N-terminal helical region FE240_05700 PF07196 Flagellin hook IN motif FE240_05700 PF00700 Bacterial flagellin C-terminal helical region FE240_05710 PF07195 Flagellar hook-associated protein 2 C-terminus FE240_05710 PF02465 Flagellar hook-associated protein 2 N-terminus FE240_05710 PF07196 Flagellin hook IN motif FE240_05715 PF02561 Flagellar protein FliS FE240_05740 PF08666 SAF domain FE240_05740 PF03102 NeuB family FE240_05755 PF00202 Aminotransferase class-III FE240_05760 PF02348 Cytidylyltransferase FE240_05770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FE240_05775 PF02719 Polysaccharide biosynthesis protein FE240_05780 PF00571 CBS domain FE240_05780 PF01769 Divalent cation transporter FE240_05780 PF03448 MgtE intracellular N domain FE240_05785 PF02541 Ppx/GppA phosphatase family FE240_05790 PF17941 Polyphosphate kinase C-terminal domain 1 FE240_05790 PF13090 Polyphosphate kinase C-terminal domain 2 FE240_05790 PF02503 Polyphosphate kinase middle domain FE240_05790 PF13089 Polyphosphate kinase N-terminal domain FE240_05795 PF01842 ACT domain FE240_05805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE240_05805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE240_05810 PF00230 Major intrinsic protein FE240_05815 PF08220 DeoR-like helix-turn-helix domain FE240_05815 PF00455 DeoR C terminal sensor domain FE240_05820 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FE240_05820 PF01266 FAD dependent oxidoreductase FE240_05825 PF00793 DAHP synthetase I family FE240_05830 PF02153 Prephenate dehydrogenase FE240_05830 PF01817 Chorismate mutase type II FE240_05835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_05835 PF03466 LysR substrate binding domain FE240_05840 PF04219 Protein of unknown function, DUF FE240_05845 PF00480 ROK family FE240_05845 PF01047 MarR family FE240_05850 PF01979 Amidohydrolase family FE240_05855 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FE240_05860 PF02378 Phosphotransferase system, EIIC FE240_05860 PF00367 phosphotransferase system, EIIB FE240_05860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FE240_05865 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FE240_05865 PF00728 Glycosyl hydrolase family 20, catalytic domain FE240_05865 PF02838 Glycosyl hydrolase family 20, domain 2 FE240_05865 PF03173 Putative carbohydrate binding domain FE240_05870 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE240_05870 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FE240_05875 PF01475 Ferric uptake regulator family FE240_05885 PF04055 Radical SAM superfamily FE240_05885 PF18693 TRAM domain FE240_05885 PF00919 Uncharacterized protein family UPF0004 FE240_05890 PF02049 Flagellar hook-basal body complex protein FliE FE240_05895 PF01514 Secretory protein of YscJ/FliF family FE240_05895 PF08345 Flagellar M-ring protein C-terminal FE240_05900 PF01706 FliG C-terminal domain FE240_05900 PF14841 FliG middle domain FE240_05900 PF14842 FliG N-terminal domain FE240_05910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE240_05910 PF18269 T3SS EscN ATPase C-terminal domain FE240_05930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FE240_05930 PF02154 Flagellar motor switch protein FliM FE240_05935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FE240_05940 PF04347 Flagellar biosynthesis protein, FliO FE240_05945 PF00813 FliP family FE240_05950 PF01313 Bacterial export proteins, family 3 FE240_05955 PF01311 Bacterial export proteins, family 1 FE240_05960 PF01312 FlhB HrpN YscU SpaS Family FE240_05965 PF00771 FHIPEP family FE240_05970 PF00448 SRP54-type protein, GTPase domain FE240_05975 PF10609 NUBPL iron-transfer P-loop NTPase FE240_05980 PF04545 Sigma-70, region 4 FE240_05980 PF04539 Sigma-70 region 3 FE240_05980 PF04542 Sigma-70 region 2 FE240_05985 PF00072 Response regulator receiver domain FE240_05990 PF04344 Chemotaxis phosphatase, CheZ FE240_05995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_05995 PF01627 Hpt domain FE240_05995 PF02895 Signal transducing histidine kinase, homodimeric domain FE240_05995 PF01584 CheW-like domain FE240_05995 PF00072 Response regulator receiver domain FE240_06000 PF01339 CheB methylesterase FE240_06000 PF00072 Response regulator receiver domain FE240_06005 PF01618 MotA/TolQ/ExbB proton channel family FE240_06010 PF00691 OmpA family FE240_06010 PF13677 Membrane MotB of proton-channel complex MotA/MotB FE240_06015 PF13614 AAA domain FE240_06025 PF01584 CheW-like domain FE240_06035 PF00005 ABC transporter FE240_06040 PF03379 CcmB protein FE240_06045 PF01578 Cytochrome C assembly protein FE240_06050 PF04995 Heme exporter protein D (CcmD) FE240_06055 PF03100 CcmE FE240_06060 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FE240_06060 PF01578 Cytochrome C assembly protein FE240_06065 PF08534 Redoxin FE240_06070 PF03918 Cytochrome C biogenesis protein FE240_06080 PF04333 MlaA lipoprotein FE240_06085 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FE240_06085 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FE240_06090 PF00462 Glutaredoxin FE240_06095 PF01189 16S rRNA methyltransferase RsmB/F FE240_06095 PF01029 NusB family FE240_06110 PF01243 Pyridoxamine 5'-phosphate oxidase FE240_06110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FE240_06115 PF13508 Acetyltransferase (GNAT) domain FE240_06120 PF03773 Predicted permease FE240_06125 PF08007 Cupin superfamily protein FE240_06130 PF00206 Lyase FE240_06130 PF08328 Adenylosuccinate lyase C-terminal FE240_06135 PF04356 Protein of unknown function (DUF489) FE240_06145 PF00293 NUDIX domain FE240_06150 PF00849 RNA pseudouridylate synthase FE240_06155 PF07690 Major Facilitator Superfamily FE240_06160 PF00005 ABC transporter FE240_06165 PF01032 FecCD transport family FE240_06170 PF01497 Periplasmic binding protein FE240_06175 PF00180 Isocitrate/isopropylmalate dehydrogenase FE240_06195 PF06953 Arsenical resistance operon trans-acting repressor ArsD FE240_06200 PF02374 Anion-transporting ATPase FE240_06205 PF01758 Sodium Bile acid symporter family FE240_06210 PF03960 ArsC family FE240_06220 PF00155 Aminotransferase class I and II FE240_06230 PF00849 RNA pseudouridylate synthase FE240_06240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE240_06245 PF04209 homogentisate 1,2-dioxygenase FE240_06255 PF02798 Glutathione S-transferase, N-terminal domain FE240_06255 PF14497 Glutathione S-transferase, C-terminal domain FE240_06260 PF01212 Beta-eliminating lyase FE240_06270 PF00072 Response regulator receiver domain FE240_06275 PF03466 LysR substrate binding domain FE240_06275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_06280 PF00990 Diguanylate cyclase, GGDEF domain FE240_06280 PF00563 EAL domain FE240_06280 PF03707 Bacterial signalling protein N terminal repeat FE240_06285 PF00881 Nitroreductase family FE240_06300 PF07690 Major Facilitator Superfamily FE240_06305 PF03466 LysR substrate binding domain FE240_06305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_06310 PF00440 Bacterial regulatory proteins, tetR family FE240_06315 PF02770 Acyl-CoA dehydrogenase, middle domain FE240_06315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE240_06315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE240_06315 PF09317 Domain of unknown function (DUF1974) FE240_06320 PF02887 Pyruvate kinase, alpha/beta domain FE240_06320 PF00224 Pyruvate kinase, barrel domain FE240_06325 PF01380 SIS domain FE240_06325 PF01418 Helix-turn-helix domain, rpiR family FE240_06330 PF02685 Glucokinase FE240_06340 PF03918 Cytochrome C biogenesis protein FE240_06345 PF08534 Redoxin FE240_06350 PF01578 Cytochrome C assembly protein FE240_06350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FE240_06355 PF03916 Polysulphide reductase, NrfD FE240_06360 PF00037 4Fe-4S binding domain FE240_06360 PF13247 4Fe-4S dicluster domain FE240_06365 PF13435 Cytochrome c554 and c-prime FE240_06365 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FE240_06370 PF02335 Cytochrome c552 FE240_06375 PF13183 4Fe-4S dicluster domain FE240_06375 PF02754 Cysteine-rich domain FE240_06380 PF00890 FAD binding domain FE240_06385 PF04324 BFD-like [2Fe-2S] binding domain FE240_06385 PF01266 FAD dependent oxidoreductase FE240_06395 PF02810 SEC-C motif FE240_06400 PF17200 Single Cache domain 2 FE240_06400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_06400 PF00672 HAMP domain FE240_06405 PF00480 ROK family FE240_06405 PF01047 MarR family FE240_06410 PF02901 Pyruvate formate lyase-like FE240_06410 PF01228 Glycine radical FE240_06415 PF01226 Formate/nitrite transporter FE240_06420 PF18381 YcaO cyclodehydratase C-terminal domain FE240_06420 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FE240_06425 PF00893 Small Multidrug Resistance protein FE240_06430 PF02774 Semialdehyde dehydrogenase, dimerisation domain FE240_06430 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE240_06435 PF00884 Sulfatase FE240_06440 PF00696 Amino acid kinase family FE240_06440 PF01842 ACT domain FE240_06445 PF00696 Amino acid kinase family FE240_06445 PF00583 Acetyltransferase (GNAT) family FE240_06450 PF01625 Peptide methionine sulfoxide reductase FE240_06470 PF00561 alpha/beta hydrolase fold FE240_06475 PF03466 LysR substrate binding domain FE240_06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_06480 PF02652 L-lactate permease FE240_06485 PF02754 Cysteine-rich domain FE240_06490 PF13183 4Fe-4S dicluster domain FE240_06490 PF02589 LUD domain FE240_06490 PF11870 Domain of unknown function (DUF3390) FE240_06495 PF02589 LUD domain FE240_06500 PF02913 FAD linked oxidases, C-terminal domain FE240_06500 PF01565 FAD binding domain FE240_06530 PF02687 FtsX-like permease family FE240_06530 PF12704 MacB-like periplasmic core domain FE240_06535 PF00005 ABC transporter FE240_06545 PF07690 Major Facilitator Superfamily FE240_06565 PF03239 Iron permease FTR1 family FE240_06590 PF00929 Exonuclease FE240_06595 PF18393 MotY N-terminal domain FE240_06595 PF00691 OmpA family FE240_06600 PF00571 CBS domain FE240_06600 PF03471 Transporter associated domain FE240_06600 PF01595 Cyclin M transmembrane N-terminal domain FE240_06610 PF01926 50S ribosome-binding GTPase FE240_06615 PF00850 Histone deacetylase domain FE240_06620 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FE240_06625 PF06733 DEAD_2 FE240_06625 PF13307 Helicase C-terminal domain FE240_06630 PF13609 Gram-negative porin FE240_06635 PF01261 Xylose isomerase-like TIM barrel FE240_06640 PF03461 TRCF domain FE240_06640 PF17757 UvrB interaction domain FE240_06640 PF00271 Helicase conserved C-terminal domain FE240_06640 PF00270 DEAD/DEAH box helicase FE240_06640 PF02559 CarD-like/TRCF domain FE240_06650 PF12704 MacB-like periplasmic core domain FE240_06650 PF02687 FtsX-like permease family FE240_06655 PF00005 ABC transporter FE240_06660 PF02687 FtsX-like permease family FE240_06660 PF12704 MacB-like periplasmic core domain FE240_06675 PF03776 Septum formation topological specificity factor MinE FE240_06680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FE240_06685 PF05209 Septum formation inhibitor MinC, N-terminal domain FE240_06685 PF03775 Septum formation inhibitor MinC, C-terminal domain FE240_06690 PF05166 YcgL domain FE240_06695 PF03692 Putative zinc- or iron-chelating domain FE240_06700 PF02600 Disulfide bond formation protein DsbB FE240_06705 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FE240_06710 PF00392 Bacterial regulatory proteins, gntR family FE240_06710 PF07840 FadR C-terminal domain FE240_06715 PF04293 SpoVR like protein FE240_06720 PF04285 Protein of unknown function (DUF444) FE240_06725 PF06798 PrkA serine protein kinase C-terminal domain FE240_06725 PF08298 PrkA AAA domain FE240_06735 PF02824 TGS domain FE240_06735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FE240_06735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE240_06735 PF03129 Anticodon binding domain FE240_06740 PF05198 Translation initiation factor IF-3, N-terminal domain FE240_06740 PF00707 Translation initiation factor IF-3, C-terminal domain FE240_06745 PF01632 Ribosomal protein L35 FE240_06750 PF00453 Ribosomal protein L20 FE240_06755 PF00005 ABC transporter FE240_06755 PF12848 ABC transporter FE240_06760 PF00990 Diguanylate cyclase, GGDEF domain FE240_06760 PF17158 Membrane-associated sensor, integral membrane domain FE240_06765 PF00474 Sodium:solute symporter family FE240_06770 PF04341 Protein of unknown function, DUF485 FE240_06785 PF00378 Enoyl-CoA hydratase/isomerase FE240_06790 PF01235 Sodium:alanine symporter family FE240_06800 PF06167 Glucose-regulated metallo-peptidase M90 FE240_06805 PF01184 GPR1/FUN34/yaaH family FE240_06820 PF09278 MerR, DNA binding FE240_06820 PF00376 MerR family regulatory protein FE240_06825 PF00682 HMGL-like FE240_06830 PF02785 Biotin carboxylase C-terminal domain FE240_06830 PF00289 Biotin carboxylase, N-terminal domain FE240_06830 PF00364 Biotin-requiring enzyme FE240_06830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE240_06830 PF18140 Propionyl-coenzyme A carboxylase BT domain FE240_06835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE240_06835 PF00378 Enoyl-CoA hydratase/isomerase FE240_06835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE240_06840 PF01039 Carboxyl transferase domain FE240_06845 PF02770 Acyl-CoA dehydrogenase, middle domain FE240_06845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE240_06845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE240_06850 PF00171 Aldehyde dehydrogenase family FE240_06855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE240_06855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE240_06855 PF02770 Acyl-CoA dehydrogenase, middle domain FE240_06860 PF00378 Enoyl-CoA hydratase/isomerase FE240_06865 PF00378 Enoyl-CoA hydratase/isomerase FE240_06870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE240_06870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE240_06880 PF13520 Amino acid permease FE240_06885 PF01925 Sulfite exporter TauE/SafE FE240_06895 PF00419 Fimbrial protein FE240_06905 PF00577 Outer membrane usher protein FE240_06905 PF13954 PapC N-terminal domain FE240_06905 PF13953 PapC C-terminal domain FE240_06910 PF02753 Pili assembly chaperone PapD, C-terminal domain FE240_06910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE240_06920 PF02753 Pili assembly chaperone PapD, C-terminal domain FE240_06920 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE240_06950 PF02001 Protein of unknown function DUF134 FE240_06955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_06955 PF03466 LysR substrate binding domain FE240_06960 PF00232 Glycosyl hydrolase family 1 FE240_06965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_06965 PF08447 PAS fold FE240_06965 PF13426 PAS domain FE240_06970 PF00672 HAMP domain FE240_06970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_06975 PF01230 HIT domain FE240_07010 PF13721 SecD export protein N-terminal TM region FE240_07010 PF02355 Protein export membrane protein FE240_07010 PF07549 SecD/SecF GG Motif FE240_07015 PF02355 Protein export membrane protein FE240_07015 PF07549 SecD/SecF GG Motif FE240_07020 PF01638 HxlR-like helix-turn-helix FE240_07025 PF03358 NADPH-dependent FMN reductase FE240_07035 PF05661 Protein of unknown function (DUF808) FE240_07040 PF05728 Uncharacterised protein family (UPF0227) FE240_07045 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_07050 PF01906 Putative heavy-metal-binding FE240_07055 PF08240 Alcohol dehydrogenase GroES-like domain FE240_07055 PF00107 Zinc-binding dehydrogenase FE240_07060 PF00285 Citrate synthase, C-terminal domain FE240_07065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FE240_07070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FE240_07075 PF02910 Fumarate reductase flavoprotein C-term FE240_07075 PF00890 FAD binding domain FE240_07080 PF13085 2Fe-2S iron-sulfur cluster binding domain FE240_07085 PF00676 Dehydrogenase E1 component FE240_07085 PF16078 2-oxoglutarate dehydrogenase N-terminus FE240_07085 PF02779 Transketolase, pyrimidine binding domain FE240_07085 PF16870 2-oxoglutarate dehydrogenase C-terminal FE240_07090 PF02817 e3 binding domain FE240_07090 PF00364 Biotin-requiring enzyme FE240_07090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FE240_07095 PF08442 ATP-grasp domain FE240_07095 PF00549 CoA-ligase FE240_07100 PF00549 CoA-ligase FE240_07100 PF02629 CoA binding domain FE240_07110 PF03315 Serine dehydratase beta chain FE240_07110 PF03313 Serine dehydratase alpha chain FE240_07115 PF03313 Serine dehydratase alpha chain FE240_07115 PF03315 Serine dehydratase beta chain FE240_07120 PF03222 Tryptophan/tyrosine permease family FE240_07125 PF00293 NUDIX domain FE240_07130 PF04715 Anthranilate synthase component I, N terminal region FE240_07130 PF00425 chorismate binding enzyme FE240_07150 PF00528 Binding-protein-dependent transport system inner membrane component FE240_07155 PF00528 Binding-protein-dependent transport system inner membrane component FE240_07160 PF00005 ABC transporter FE240_07165 PF01895 PhoU domain FE240_07170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE240_07175 PF00730 HhH-GPD superfamily base excision DNA repair protein FE240_07175 PF00633 Helix-hairpin-helix motif FE240_07175 PF10576 Iron-sulfur binding domain of endonuclease III FE240_07180 PF02508 Rnf-Nqr subunit, membrane protein FE240_07185 PF04205 FMN-binding domain FE240_07190 PF03116 NQR2, RnfD, RnfE family FE240_07195 PF12838 4Fe-4S dicluster domain FE240_07195 PF10531 SLBB domain FE240_07195 PF13375 RnfC Barrel sandwich hybrid domain FE240_07195 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FE240_07200 PF04060 Putative Fe-S cluster FE240_07205 PF02508 Rnf-Nqr subunit, membrane protein FE240_07225 PF07728 AAA domain (dynein-related subfamily) FE240_07225 PF17863 AAA lid domain FE240_07225 PF13519 von Willebrand factor type A domain FE240_07235 PF01882 Protein of unknown function DUF58 FE240_07240 PF07726 ATPase family associated with various cellular activities (AAA) FE240_07240 PF17863 AAA lid domain FE240_07245 PF00108 Thiolase, N-terminal domain FE240_07245 PF02803 Thiolase, C-terminal domain FE240_07250 PF00378 Enoyl-CoA hydratase/isomerase FE240_07250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE240_07250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE240_07260 PF07152 YaeQ protein FE240_07275 PF09335 SNARE associated Golgi protein FE240_07280 PF01266 FAD dependent oxidoreductase FE240_07285 PF03466 LysR substrate binding domain FE240_07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_07290 PF08267 Cobalamin-independent synthase, N-terminal domain FE240_07290 PF01717 Cobalamin-independent synthase, Catalytic domain FE240_07300 PF00483 Nucleotidyl transferase FE240_07310 PF07273 Protein of unknown function (DUF1439) FE240_07315 PF01497 Periplasmic binding protein FE240_07320 PF00005 ABC transporter FE240_07325 PF01032 FecCD transport family FE240_07330 PF01032 FecCD transport family FE240_07335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE240_07335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE240_07340 PF03466 LysR substrate binding domain FE240_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_07350 PF02535 ZIP Zinc transporter FE240_07355 PF00324 Amino acid permease FE240_07360 PF03618 Kinase/pyrophosphorylase FE240_07365 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FE240_07365 PF02896 PEP-utilising enzyme, TIM barrel domain FE240_07365 PF00391 PEP-utilising enzyme, mobile domain FE240_07380 PF03831 PhnA domain FE240_07380 PF08274 PhnA Zinc-Ribbon FE240_07385 PF00149 Calcineurin-like phosphoesterase FE240_07390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FE240_07395 PF01406 tRNA synthetases class I (C) catalytic domain FE240_07395 PF09190 DALR domain FE240_07435 PF01169 Uncharacterized protein family UPF0016 FE240_07440 PF01253 Translation initiation factor SUI1 FE240_07450 PF17910 FeoB cytosolic helical domain FE240_07450 PF02421 Ferrous iron transport protein B FE240_07450 PF07670 Nucleoside recognition FE240_07450 PF07664 Ferrous iron transport protein B C terminus FE240_07460 PF00437 Type II/IV secretion system protein FE240_07470 PF01032 FecCD transport family FE240_07475 PF00005 ABC transporter FE240_07480 PF00793 DAHP synthetase I family FE240_07485 PF01219 Prokaryotic diacylglycerol kinase FE240_07490 PF05698 Bacterial trigger factor protein (TF) C-terminus FE240_07490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE240_07490 PF05697 Bacterial trigger factor protein (TF) FE240_07495 PF00574 Clp protease FE240_07500 PF06689 ClpX C4-type zinc finger FE240_07500 PF10431 C-terminal, D2-small domain, of ClpB protein FE240_07500 PF07724 AAA domain (Cdc48 subfamily) FE240_07505 PF02190 ATP-dependent protease La (LON) substrate-binding domain FE240_07505 PF00004 ATPase family associated with various cellular activities (AAA) FE240_07505 PF05362 Lon protease (S16) C-terminal proteolytic domain FE240_07510 PF00216 Bacterial DNA-binding protein FE240_07515 PF13145 PPIC-type PPIASE domain FE240_07520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_07525 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FE240_07530 PF03222 Tryptophan/tyrosine permease family FE240_07535 PF00356 Bacterial regulatory proteins, lacI family FE240_07535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE240_07540 PF00381 PTS HPr component phosphorylation site FE240_07540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE240_07545 PF00294 pfkB family carbohydrate kinase FE240_07550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE240_07550 PF02378 Phosphotransferase system, EIIC FE240_07555 PF06945 Protein of unknown function (DUF1289) FE240_07560 PF06725 3D domain FE240_07560 PF03562 MltA specific insert domain FE240_07565 PF14748 Pyrroline-5-carboxylate reductase dimerisation FE240_07565 PF03807 NADP oxidoreductase coenzyme F420-dependent FE240_07575 PF11143 Protein of unknown function (DUF2919) FE240_07595 PF01867 CRISPR associated protein Cas1 FE240_07605 PF09611 CRISPR-associated protein (Cas_Csy1) FE240_07610 PF09614 CRISPR-associated protein (Cas_Csy2) FE240_07615 PF09615 CRISPR-associated protein (Cas_Csy3) FE240_07620 PF09618 CRISPR-associated protein (Cas_Csy4) FE240_07635 PF04536 TPM domain FE240_07640 PF04011 LemA family FE240_07645 PF03411 Penicillin-insensitive murein endopeptidase FE240_07655 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FE240_07660 PF00248 Aldo/keto reductase family FE240_07675 PF00733 Asparagine synthase FE240_07675 PF13537 Glutamine amidotransferase domain FE240_07680 PF13344 Haloacid dehalogenase-like hydrolase FE240_07690 PF05433 Glycine zipper 2TM domain FE240_07695 PF00892 EamA-like transporter family FE240_07700 PF00313 'Cold-shock' DNA-binding domain FE240_07705 PF02617 ATP-dependent Clp protease adaptor protein ClpS FE240_07710 PF17871 AAA lid domain FE240_07710 PF02861 Clp amino terminal domain, pathogenicity island component FE240_07710 PF07724 AAA domain (Cdc48 subfamily) FE240_07710 PF10431 C-terminal, D2-small domain, of ClpB protein FE240_07710 PF00004 ATPase family associated with various cellular activities (AAA) FE240_07715 PF01176 Translation initiation factor 1A / IF-1 FE240_07720 PF04377 Arginine-tRNA-protein transferase, C terminus FE240_07720 PF04376 Arginine-tRNA-protein transferase, N terminus FE240_07725 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FE240_07730 PF05433 Glycine zipper 2TM domain FE240_07735 PF00990 Diguanylate cyclase, GGDEF domain FE240_07735 PF00072 Response regulator receiver domain FE240_07740 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_07750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE240_07750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE240_07750 PF11890 Domain of unknown function (DUF3410) FE240_07755 PF02774 Semialdehyde dehydrogenase, dimerisation domain FE240_07755 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE240_07765 PF01416 tRNA pseudouridine synthase FE240_07770 PF17848 Acetyl-coA carboxylase zinc finger domain FE240_07770 PF01039 Carboxyl transferase domain FE240_07775 PF02875 Mur ligase family, glutamate ligase domain FE240_07775 PF08245 Mur ligase middle domain FE240_07780 PF05036 Sporulation related domain FE240_07785 PF04358 DsrC like protein FE240_07790 PF12805 FUSC-like inner membrane protein yccS FE240_07795 PF01027 Inhibitor of apoptosis-promoting Bax1 FE240_07825 PF01554 MatE FE240_07830 PF06786 Uncharacterised protein family (UPF0253) FE240_07835 PF00677 Lumazine binding domain FE240_07850 PF13419 Haloacid dehalogenase-like hydrolase FE240_07855 PF02222 ATP-grasp domain FE240_07860 PF00892 EamA-like transporter family FE240_07865 PF02525 Flavodoxin-like fold FE240_07885 PF17783 CvfB-like winged helix domain FE240_07885 PF13509 S1 domain FE240_07895 PF04269 Protein of unknown function, DUF440 FE240_07900 PF00912 Transglycosylase FE240_07905 PF04269 Protein of unknown function, DUF440 FE240_07920 PF00271 Helicase conserved C-terminal domain FE240_07920 PF00270 DEAD/DEAH box helicase FE240_07925 PF00255 Glutathione peroxidase FE240_07935 PF07478 D-ala D-ala ligase C-terminus FE240_07935 PF01820 D-ala D-ala ligase N-terminus FE240_07940 PF03942 DTW domain FE240_07945 PF01925 Sulfite exporter TauE/SafE FE240_07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_07950 PF03466 LysR substrate binding domain FE240_07960 PF12833 Helix-turn-helix domain FE240_07960 PF06445 GyrI-like small molecule binding domain FE240_07965 PF11398 Protein of unknown function (DUF2813) FE240_08015 PF13419 Haloacid dehalogenase-like hydrolase FE240_08020 PF07687 Peptidase dimerisation domain FE240_08020 PF01546 Peptidase family M20/M25/M40 FE240_08035 PF00271 Helicase conserved C-terminal domain FE240_08035 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FE240_08035 PF11898 Domain of unknown function (DUF3418) FE240_08035 PF00270 DEAD/DEAH box helicase FE240_08035 PF04408 Helicase associated domain (HA2) FE240_08045 PF01386 Ribosomal L25p family FE240_08050 PF00753 Metallo-beta-lactamase superfamily FE240_08060 PF02769 AIR synthase related protein, C-terminal domain FE240_08060 PF00586 AIR synthase related protein, N-terminal domain FE240_08070 PF17785 PUA-like domain FE240_08070 PF10672 S-adenosylmethionine-dependent methyltransferase FE240_08075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_08075 PF00672 HAMP domain FE240_08080 PF00708 Acylphosphatase FE240_08090 PF01588 Putative tRNA binding domain FE240_08090 PF09334 tRNA synthetases class I (M) FE240_08090 PF08264 Anticodon-binding domain of tRNA FE240_08095 PF10609 NUBPL iron-transfer P-loop NTPase FE240_08100 PF00485 Phosphoribulokinase / Uridine kinase family FE240_08105 PF00692 dUTPase FE240_08110 PF01384 Phosphate transporter family FE240_08115 PF10150 Ribonuclease E/G family FE240_08115 PF00575 S1 RNA binding domain FE240_08115 PF12111 Polyribonucleotide phosphorylase C terminal FE240_08120 PF00849 RNA pseudouridylate synthase FE240_08120 PF01479 S4 domain FE240_08130 PF02545 Maf-like protein FE240_08135 PF02620 Large ribosomal RNA subunit accumulation protein YceD FE240_08140 PF01783 Ribosomal L32p protein family FE240_08145 PF02504 Fatty acid synthesis protein FE240_08150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FE240_08150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FE240_08155 PF00698 Acyl transferase domain FE240_08165 PF00550 Phosphopantetheine attachment site FE240_08170 PF00109 Beta-ketoacyl synthase, N-terminal domain FE240_08170 PF02801 Beta-ketoacyl synthase, C-terminal domain FE240_08175 PF01063 Amino-transferase class IV FE240_08180 PF02618 YceG-like family FE240_08185 PF02223 Thymidylate kinase FE240_08190 PF09115 DNA polymerase III, delta subunit, C terminal FE240_08195 PF01026 TatD related DNase FE240_08200 PF00589 Phage integrase family FE240_08210 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FE240_08210 PF01189 16S rRNA methyltransferase RsmB/F FE240_08210 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FE240_08215 PF02470 MlaD protein FE240_08220 PF04403 Paraquat-inducible protein A FE240_08235 PF00285 Citrate synthase, C-terminal domain FE240_08240 PF03972 MmgE/PrpD family FE240_08245 PF07130 YebG protein FE240_08330 PF13654 AAA domain FE240_08330 PF05362 Lon protease (S16) C-terminal proteolytic domain FE240_08335 PF07977 FabA-like domain FE240_08340 PF04957 Ribosome modulation factor FE240_08350 PF12848 ABC transporter FE240_08350 PF16326 ABC transporter C-terminal domain FE240_08350 PF00005 ABC transporter FE240_08360 PF01170 Putative RNA methylase family UPF0020 FE240_08360 PF02926 THUMP domain FE240_08360 PF10672 S-adenosylmethionine-dependent methyltransferase FE240_08365 PF07126 Cell-division protein ZapC FE240_08370 PF01180 Dihydroorotate dehydrogenase FE240_08375 PF05088 Bacterial NAD-glutamate dehydrogenase FE240_08385 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FE240_08385 PF11940 Domain of unknown function (DUF3458) Ig-like fold FE240_08385 PF01433 Peptidase family M1 domain FE240_08405 PF00664 ABC transporter transmembrane region FE240_08405 PF00005 ABC transporter FE240_08410 PF00664 ABC transporter transmembrane region FE240_08410 PF00005 ABC transporter FE240_08415 PF00085 Thioredoxin FE240_08420 PF00939 Sodium:sulfate symporter transmembrane region FE240_08425 PF00343 Carbohydrate phosphorylase FE240_08440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FE240_08445 PF00108 Thiolase, N-terminal domain FE240_08445 PF02803 Thiolase, C-terminal domain FE240_08450 PF09278 MerR, DNA binding FE240_08450 PF00376 MerR family regulatory protein FE240_08460 PF06865 Pyrimidine/purine nucleoside phosphorylase FE240_08470 PF02801 Beta-ketoacyl synthase, C-terminal domain FE240_08470 PF00109 Beta-ketoacyl synthase, N-terminal domain FE240_08475 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FE240_08475 PF01266 FAD dependent oxidoreductase FE240_08485 PF03606 C4-dicarboxylate anaerobic carrier FE240_08490 PF00149 Calcineurin-like phosphoesterase FE240_08490 PF02872 5'-nucleotidase, C-terminal domain FE240_08500 PF01863 Protein of unknown function DUF45 FE240_08515 PF06224 Winged helix DNA-binding domain FE240_08520 PF08411 Exonuclease C-terminal FE240_08520 PF00929 Exonuclease FE240_08535 PF03788 LrgA family FE240_08540 PF04172 LrgB-like family FE240_08545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FE240_08545 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FE240_08555 PF04055 Radical SAM superfamily FE240_08560 PF00521 DNA gyrase/topoisomerase IV, subunit A FE240_08560 PF03989 DNA gyrase C-terminal domain, beta-propeller FE240_08570 PF13419 Haloacid dehalogenase-like hydrolase FE240_08575 PF03477 ATP cone domain FE240_08575 PF02867 Ribonucleotide reductase, barrel domain FE240_08575 PF00317 Ribonucleotide reductase, all-alpha domain FE240_08580 PF00268 Ribonucleotide reductase, small chain FE240_08585 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_08590 PF11818 C-terminal domain of tail specific protease (DUF3340) FE240_08590 PF00595 PDZ domain FE240_08590 PF03572 Peptidase family S41 FE240_08590 PF17804 Tail specific protease N-terminal domain FE240_08595 PF04352 ProQ/FINO family FE240_08595 PF17516 ProQ C-terminal domain FE240_08600 PF13185 GAF domain FE240_08615 PF00115 Cytochrome C and Quinol oxidase polypeptide I FE240_08630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE240_08630 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FE240_08640 PF00403 Heavy-metal-associated domain FE240_08655 PF13545 Crp-like helix-turn-helix domain FE240_08655 PF00027 Cyclic nucleotide-binding domain FE240_08660 PF00582 Universal stress protein family FE240_08665 PF01171 PP-loop family FE240_08680 PF00005 ABC transporter FE240_08680 PF08402 TOBE domain FE240_08685 PF00528 Binding-protein-dependent transport system inner membrane component FE240_08690 PF00528 Binding-protein-dependent transport system inner membrane component FE240_08695 PF13416 Bacterial extracellular solute-binding protein FE240_08700 PF00043 Glutathione S-transferase, C-terminal domain FE240_08700 PF02798 Glutathione S-transferase, N-terminal domain FE240_08705 PF05025 RbsD / FucU transport protein family FE240_08710 PF00005 ABC transporter FE240_08715 PF02653 Branched-chain amino acid transport system / permease component FE240_08720 PF13407 Periplasmic binding protein domain FE240_08725 PF00294 pfkB family carbohydrate kinase FE240_08730 PF00356 Bacterial regulatory proteins, lacI family FE240_08735 PF00990 Diguanylate cyclase, GGDEF domain FE240_08735 PF17152 Periplasmic sensor domain FE240_08745 PF02146 Sir2 family FE240_08760 PF09456 RcsC Alpha-Beta-Loop (ABL) FE240_08760 PF00072 Response regulator receiver domain FE240_08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_08760 PF00512 His Kinase A (phospho-acceptor) domain FE240_08765 PF00216 Bacterial DNA-binding protein FE240_08770 PF03147 Ferredoxin-fold anticodon binding domain FE240_08770 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FE240_08770 PF03484 tRNA synthetase B5 domain FE240_08770 PF03483 B3/4 domain FE240_08770 PF01588 Putative tRNA binding domain FE240_08775 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FE240_08775 PF01409 tRNA synthetases class II core domain (F) FE240_08780 PF03466 LysR substrate binding domain FE240_08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_08785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FE240_08785 PF00355 Rieske [2Fe-2S] domain FE240_08790 PF00866 Ring hydroxylating beta subunit FE240_08795 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_08795 PF00175 Oxidoreductase NAD-binding domain FE240_08795 PF00970 Oxidoreductase FAD-binding domain FE240_08800 PF00106 short chain dehydrogenase FE240_08805 PF01381 Helix-turn-helix FE240_08815 PF08401 Domain of unknown function (DUF1738) FE240_08815 PF13362 Toprim domain FE240_08815 PF18818 Metallopeptidase superfamily domain FE240_08855 PF13356 Arm DNA-binding domain FE240_08855 PF00589 Phage integrase family FE240_08875 PF01066 CDP-alcohol phosphatidyltransferase FE240_08880 PF01541 GIY-YIG catalytic domain FE240_08880 PF08459 UvrC Helix-hairpin-helix N-terminal FE240_08880 PF02151 UvrB/uvrC motif FE240_08885 PF00072 Response regulator receiver domain FE240_08885 PF00196 Bacterial regulatory proteins, luxR family FE240_08890 PF02348 Cytidylyltransferase FE240_08895 PF03966 Trm112p-like protein FE240_08900 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FE240_08905 PF00005 ABC transporter FE240_08905 PF00664 ABC transporter transmembrane region FE240_08910 PF00753 Metallo-beta-lactamase superfamily FE240_08910 PF03772 Competence protein FE240_08925 PF00375 Sodium:dicarboxylate symporter family FE240_08935 PF00300 Histidine phosphatase superfamily (branch 1) FE240_08940 PF00675 Insulinase (Peptidase family M16) FE240_08940 PF16187 Middle or third domain of peptidase_M16 FE240_08940 PF05193 Peptidase M16 inactive domain FE240_08945 PF05724 Thiopurine S-methyltransferase (TPMT) FE240_08965 PF00809 Pterin binding enzyme FE240_08970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FE240_08970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FE240_08970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FE240_08970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FE240_08985 PF13086 AAA domain FE240_08985 PF13195 Protein of unknown function (DUF4011) FE240_08985 PF13086 AAA domain FE240_08985 PF13195 Protein of unknown function (DUF4011) FE240_08985 PF13087 AAA domain FE240_08985 PF13087 AAA domain FE240_08995 PF17394 Uncharacterized KleE stable inheritance protein FE240_09015 PF13784 Fic/DOC family N-terminal FE240_09015 PF02661 Fic/DOC family FE240_09020 PF01526 Tn3 transposase DDE domain FE240_09020 PF13700 Domain of unknown function (DUF4158) FE240_09025 PF00239 Resolvase, N terminal domain FE240_09025 PF02796 Helix-turn-helix domain of resolvase FE240_09070 PF18821 Large polyvalent protein-associated domain 7 FE240_09070 PF03432 Relaxase/Mobilisation nuclease domain FE240_09080 PF17273 Family of unknown function (DUF5338) FE240_09105 PF13356 Arm DNA-binding domain FE240_09105 PF00589 Phage integrase family FE240_09110 PF02540 NAD synthase FE240_09110 PF00958 GMP synthase C terminal domain FE240_09110 PF00117 Glutamine amidotransferase class-I FE240_09115 PF00571 CBS domain FE240_09115 PF00478 IMP dehydrogenase / GMP reductase domain FE240_09125 PF01373 Glycosyl hydrolase family 14 FE240_09125 PF03423 Carbohydrate binding domain (family 25) FE240_09125 PF00128 Alpha amylase, catalytic domain FE240_09135 PF13742 OB-fold nucleic acid binding domain FE240_09135 PF02601 Exonuclease VII, large subunit FE240_09140 PF00793 DAHP synthetase I family FE240_09145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FE240_09150 PF00266 Aminotransferase class-V FE240_09155 PF01012 Electron transfer flavoprotein domain FE240_09155 PF00766 Electron transfer flavoprotein FAD-binding domain FE240_09160 PF01012 Electron transfer flavoprotein domain FE240_09170 PF01544 CorA-like Mg2+ transporter protein FE240_09175 PF04851 Type III restriction enzyme, res subunit FE240_09175 PF02151 UvrB/uvrC motif FE240_09175 PF17757 UvrB interaction domain FE240_09175 PF00271 Helicase conserved C-terminal domain FE240_09175 PF12344 Ultra-violet resistance protein B FE240_09185 PF00271 Helicase conserved C-terminal domain FE240_09185 PF00270 DEAD/DEAH box helicase FE240_09190 PF01264 Chorismate synthase FE240_09195 PF05175 Methyltransferase small domain FE240_09200 PF01713 Smr domain FE240_09220 PF06826 Predicted Permease Membrane Region FE240_09220 PF02080 TrkA-C domain FE240_09230 PF01168 Alanine racemase, N-terminal domain FE240_09230 PF00842 Alanine racemase, C-terminal domain FE240_09235 PF00501 AMP-binding enzyme FE240_09240 PF08891 YfcL protein FE240_09250 PF03741 Integral membrane protein TerC family FE240_09255 PF00691 OmpA family FE240_09260 PF17152 Periplasmic sensor domain FE240_09260 PF00990 Diguanylate cyclase, GGDEF domain FE240_09265 PF13689 YfiR/HmsC-like FE240_09270 PF00158 Sigma-54 interaction domain FE240_09270 PF18024 Helix-turn-helix domain FE240_09275 PF01329 Pterin 4 alpha carbinolamine dehydratase FE240_09280 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FE240_09285 PF05128 Domain of unknown function (DUF697) FE240_09290 PF04317 YcjX-like family, DUF463 FE240_09305 PF04012 PspA/IM30 family FE240_09310 PF00158 Sigma-54 interaction domain FE240_09310 PF02954 Bacterial regulatory protein, Fis family FE240_09315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_09320 PF00528 Binding-protein-dependent transport system inner membrane component FE240_09325 PF12911 N-terminal TM domain of oligopeptide transport permease C FE240_09325 PF00528 Binding-protein-dependent transport system inner membrane component FE240_09330 PF00005 ABC transporter FE240_09330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE240_09335 PF00005 ABC transporter FE240_09340 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FE240_09345 PF00156 Phosphoribosyl transferase domain FE240_09350 PF02674 Colicin V production protein FE240_09355 PF02403 Seryl-tRNA synthetase N-terminal domain FE240_09355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE240_09360 PF16193 AAA C-terminal domain FE240_09360 PF00004 ATPase family associated with various cellular activities (AAA) FE240_09360 PF12002 MgsA AAA+ ATPase C terminal FE240_09365 PF03548 Outer membrane lipoprotein carrier protein LolA FE240_09370 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FE240_09370 PF01580 FtsK/SpoIIIE family FE240_09370 PF17854 FtsK alpha domain FE240_09370 PF09397 Ftsk gamma domain FE240_09375 PF01037 Lrp/AsnC ligand binding domain FE240_09380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FE240_09380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FE240_09385 PF03180 NLPA lipoprotein FE240_09405 PF00005 ABC transporter FE240_09410 PF03330 Lytic transglycolase FE240_09415 PF16330 MukB hinge domain FE240_09415 PF04310 MukB N-terminal FE240_09420 PF04288 MukE-like family FE240_09425 PF03882 MukF winged-helix domain FE240_09425 PF17193 MukF C-terminal domain FE240_09425 PF17192 MukF middle domain FE240_09430 PF13847 Methyltransferase domain FE240_09435 PF02698 DUF218 domain FE240_09440 PF00121 Triosephosphate isomerase FE240_09445 PF00365 Phosphofructokinase FE240_09455 PF01979 Amidohydrolase family FE240_09465 PF07055 Enoyl reductase FAD binding domain FE240_09465 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FE240_09465 PF12241 Trans-2-enoyl-CoA reductase catalytic region FE240_09480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FE240_09480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FE240_09520 PF07883 Cupin domain FE240_09520 PF01381 Helix-turn-helix FE240_09525 PF03594 Benzoate membrane transport protein FE240_09535 PF08402 TOBE domain FE240_09535 PF00005 ABC transporter FE240_09540 PF00528 Binding-protein-dependent transport system inner membrane component FE240_09560 PF07702 UTRA domain FE240_09560 PF00392 Bacterial regulatory proteins, gntR family FE240_09565 PF12706 Beta-lactamase superfamily domain FE240_09570 PF01965 DJ-1/PfpI family FE240_09570 PF12833 Helix-turn-helix domain FE240_09575 PF07274 Protein of unknown function (DUF1440) FE240_09580 PF13737 Transposase DDE domain FE240_09590 PF10722 Putative bacterial sensory transduction regulator FE240_09595 PF00245 Alkaline phosphatase FE240_09600 PF00245 Alkaline phosphatase FE240_09615 PF01272 Transcription elongation factor, GreA/GreB, C-term FE240_09615 PF14760 Rnk N-terminus FE240_09620 PF00990 Diguanylate cyclase, GGDEF domain FE240_09625 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_09630 PF00528 Binding-protein-dependent transport system inner membrane component FE240_09635 PF00005 ABC transporter FE240_09640 PF13520 Amino acid permease FE240_09650 PF00271 Helicase conserved C-terminal domain FE240_09650 PF00270 DEAD/DEAH box helicase FE240_09650 PF03880 DbpA RNA binding domain FE240_09655 PF03061 Thioesterase superfamily FE240_09665 PF02913 FAD linked oxidases, C-terminal domain FE240_09665 PF01565 FAD binding domain FE240_09665 PF13183 4Fe-4S dicluster domain FE240_09675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE240_09685 PF13737 Transposase DDE domain FE240_09695 PF04717 Type VI secretion system, phage-baseplate injector FE240_09700 PF05638 Type VI secretion system effector, Hcp FE240_09705 PF03466 LysR substrate binding domain FE240_09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_09710 PF00209 Sodium:neurotransmitter symporter family FE240_09720 PF00248 Aldo/keto reductase family FE240_09725 PF07690 Major Facilitator Superfamily FE240_09730 PF02525 Flavodoxin-like fold FE240_09740 PF02322 Cytochrome bd terminal oxidase subunit II FE240_09745 PF01654 Cytochrome bd terminal oxidase subunit I FE240_09750 PF00392 Bacterial regulatory proteins, gntR family FE240_09750 PF00155 Aminotransferase class I and II FE240_09755 PF04391 Protein of unknown function (DUF533) FE240_09760 PF04391 Protein of unknown function (DUF533) FE240_09770 PF03061 Thioesterase superfamily FE240_09775 PF10689 Protein of unknown function (DUF2496) FE240_09780 PF01979 Amidohydrolase family FE240_09785 PF17810 Arginine decarboxylase helical bundle domain FE240_09785 PF17944 Arginine decarboxylase C-terminal helical extension FE240_09785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FE240_09795 PF01546 Peptidase family M20/M25/M40 FE240_09795 PF07687 Peptidase dimerisation domain FE240_09800 PF01553 Acyltransferase FE240_09820 PF03466 LysR substrate binding domain FE240_09820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_09830 PF01268 Formate--tetrahydrofolate ligase FE240_09835 PF01227 GTP cyclohydrolase I FE240_09840 PF03454 MoeA C-terminal region (domain IV) FE240_09840 PF00994 Probable molybdopterin binding domain FE240_09840 PF03453 MoeA N-terminal region (domain I and II) FE240_09845 PF00899 ThiF family FE240_09855 PF00561 alpha/beta hydrolase fold FE240_09860 PF03459 TOBE domain FE240_09860 PF00005 ABC transporter FE240_09865 PF00528 Binding-protein-dependent transport system inner membrane component FE240_09875 PF02391 MoaE protein FE240_09880 PF02597 ThiS family FE240_09885 PF01967 MoaC family FE240_09890 PF00994 Probable molybdopterin binding domain FE240_09895 PF03264 NapC/NirT cytochrome c family, N-terminal region FE240_09900 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FE240_09905 PF12837 4Fe-4S binding domain FE240_09905 PF12801 4Fe-4S binding domain FE240_09910 PF12800 4Fe-4S binding domain FE240_09910 PF12838 4Fe-4S dicluster domain FE240_09915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE240_09915 PF01568 Molydopterin dinucleotide binding domain FE240_09915 PF10518 TAT (twin-arginine translocation) pathway signal sequence FE240_09915 PF00384 Molybdopterin oxidoreductase FE240_09920 PF03927 NapD protein FE240_09925 PF13187 4Fe-4S dicluster domain FE240_09925 PF12800 4Fe-4S binding domain FE240_09925 PF00037 4Fe-4S binding domain FE240_09930 PF04055 Radical SAM superfamily FE240_09930 PF06463 Molybdenum Cofactor Synthesis C FE240_09935 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FE240_09935 PF07730 Histidine kinase FE240_09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_09935 PF00672 HAMP domain FE240_09940 PF00196 Bacterial regulatory proteins, luxR family FE240_09940 PF00072 Response regulator receiver domain FE240_09950 PF17149 Periplasmic sensor domain found in signal transduction proteins FE240_09950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_09950 PF00672 HAMP domain FE240_09950 PF00512 His Kinase A (phospho-acceptor) domain FE240_09950 PF01627 Hpt domain FE240_09950 PF00072 Response regulator receiver domain FE240_09960 PF01933 Uncharacterised protein family UPF0052 FE240_09970 PF01784 NIF3 (NGG1p interacting factor 3) FE240_09975 PF00158 Sigma-54 interaction domain FE240_09975 PF00072 Response regulator receiver domain FE240_09975 PF02954 Bacterial regulatory protein, Fis family FE240_09980 PF00512 His Kinase A (phospho-acceptor) domain FE240_09980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_09980 PF13188 PAS domain FE240_09985 PF00158 Sigma-54 interaction domain FE240_09985 PF02954 Bacterial regulatory protein, Fis family FE240_09985 PF06490 Flagellar regulatory protein FleQ FE240_09990 PF04337 Protein of unknown function, DUF480 FE240_09995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FE240_09995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FE240_09995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FE240_10005 PF02706 Chain length determinant protein FE240_10010 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FE240_10015 PF04321 RmlD substrate binding domain FE240_10020 PF02397 Bacterial sugar transferase FE240_10030 PF03275 UDP-galactopyranose mutase FE240_10045 PF01943 Polysaccharide biosynthesis protein FE240_10050 PF00132 Bacterial transferase hexapeptide (six repeats) FE240_10050 PF12464 Maltose acetyltransferase FE240_10060 PF02348 Cytidylyltransferase FE240_10065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE240_10065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE240_10070 PF00483 Nucleotidyl transferase FE240_10080 PF03102 NeuB family FE240_10080 PF08666 SAF domain FE240_10085 PF02350 UDP-N-acetylglucosamine 2-epimerase FE240_10090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FE240_10095 PF02719 Polysaccharide biosynthesis protein FE240_10100 PF16363 GDP-mannose 4,6 dehydratase FE240_10105 PF02347 Glycine cleavage system P-protein FE240_10110 PF01597 Glycine cleavage H-protein FE240_10115 PF08669 Glycine cleavage T-protein C-terminal barrel domain FE240_10115 PF01571 Aminomethyltransferase folate-binding domain FE240_10120 PF01494 FAD binding domain FE240_10125 PF01494 FAD binding domain FE240_10130 PF03695 Uncharacterised protein family (UPF0149) FE240_10135 PF05164 Cell division protein ZapA FE240_10145 PF07690 Major Facilitator Superfamily FE240_10150 PF02798 Glutathione S-transferase, N-terminal domain FE240_10150 PF00043 Glutathione S-transferase, C-terminal domain FE240_10155 PF00459 Inositol monophosphatase family FE240_10160 PF01274 Malate synthase FE240_10165 PF00463 Isocitrate lyase family FE240_10170 PF00308 Bacterial dnaA protein FE240_10185 PF02769 AIR synthase related protein, C-terminal domain FE240_10185 PF00586 AIR synthase related protein, N-terminal domain FE240_10190 PF00551 Formyl transferase FE240_10195 PF13230 Glutamine amidotransferases class-II FE240_10200 PF13580 SIS domain FE240_10205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE240_10205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE240_10205 PF09317 Domain of unknown function (DUF1974) FE240_10205 PF02770 Acyl-CoA dehydrogenase, middle domain FE240_10210 PF11849 Domain of unknown function (DUF3369) FE240_10220 PF00929 Exonuclease FE240_10225 PF00075 RNase H FE240_10230 PF08241 Methyltransferase domain FE240_10235 PF16123 Hydroxyacylglutathione hydrolase C-terminus FE240_10235 PF00753 Metallo-beta-lactamase superfamily FE240_10240 PF01464 Transglycosylase SLT domain FE240_10240 PF01476 LysM domain FE240_10245 PF00768 D-alanyl-D-alanine carboxypeptidase FE240_10255 PF02627 Carboxymuconolactone decarboxylase family FE240_10260 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_10260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE240_10265 PF13416 Bacterial extracellular solute-binding protein FE240_10270 PF00528 Binding-protein-dependent transport system inner membrane component FE240_10275 PF00005 ABC transporter FE240_10280 PF01066 CDP-alcohol phosphatidyltransferase FE240_10285 PF00578 AhpC/TSA family FE240_10285 PF10417 C-terminal domain of 1-Cys peroxiredoxin FE240_10290 PF13192 Thioredoxin domain FE240_10290 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_10295 PF03372 Endonuclease/Exonuclease/phosphatase family FE240_10305 PF03061 Thioesterase superfamily FE240_10310 PF01370 NAD dependent epimerase/dehydratase family FE240_10315 PF00356 Bacterial regulatory proteins, lacI family FE240_10320 PF01464 Transglycosylase SLT domain FE240_10320 PF14718 Soluble lytic murein transglycosylase L domain FE240_10325 PF00563 EAL domain FE240_10325 PF03707 Bacterial signalling protein N terminal repeat FE240_10325 PF00990 Diguanylate cyclase, GGDEF domain FE240_10330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FE240_10340 PF04357 TamB, inner membrane protein subunit of TAM complex FE240_10345 PF07244 Surface antigen variable number repeat FE240_10345 PF17243 POTRA domain TamA domain 1 FE240_10345 PF01103 Surface antigen FE240_10360 PF03104 DNA polymerase family B, exonuclease domain FE240_10360 PF00136 DNA polymerase family B FE240_10370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_10370 PF17200 Single Cache domain 2 FE240_10370 PF00672 HAMP domain FE240_10375 PF00294 pfkB family carbohydrate kinase FE240_10385 PF00762 Ferrochelatase FE240_10390 PF05191 Adenylate kinase, active site lid FE240_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_10395 PF00183 Hsp90 protein FE240_10400 PF13662 Toprim domain FE240_10400 PF02132 RecR protein FE240_10405 PF00563 EAL domain FE240_10405 PF03707 Bacterial signalling protein N terminal repeat FE240_10405 PF00990 Diguanylate cyclase, GGDEF domain FE240_10415 PF02575 YbaB/EbfC DNA-binding family FE240_10420 PF12169 DNA polymerase III subunits gamma and tau domain III FE240_10420 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FE240_10420 PF12170 DNA polymerase III tau subunit V interacting with alpha FE240_10425 PF00156 Phosphoribosyl transferase domain FE240_10430 PF04304 Protein of unknown function (DUF454) FE240_10435 PF01207 Dihydrouridine synthase (Dus) FE240_10445 PF00892 EamA-like transporter family FE240_10455 PF01612 3'-5' exonuclease FE240_10455 PF00570 HRDC domain FE240_10460 PF13193 AMP-binding enzyme C-terminal domain FE240_10460 PF00501 AMP-binding enzyme FE240_10465 PF12697 Alpha/beta hydrolase family FE240_10470 PF03843 Outer membrane lipoprotein Slp family FE240_10475 PF00814 Glycoprotease family FE240_10480 PF04851 Type III restriction enzyme, res subunit FE240_10480 PF13307 Helicase C-terminal domain FE240_10490 PF08029 HisG, C-terminal domain FE240_10490 PF01634 ATP phosphoribosyltransferase FE240_10495 PF00815 Histidinol dehydrogenase FE240_10500 PF00155 Aminotransferase class I and II FE240_10505 PF00475 Imidazoleglycerol-phosphate dehydratase FE240_10505 PF08645 Polynucleotide kinase 3 phosphatase FE240_10510 PF00117 Glutamine amidotransferase class-I FE240_10515 PF00977 Histidine biosynthesis protein FE240_10520 PF00977 Histidine biosynthesis protein FE240_10525 PF01502 Phosphoribosyl-AMP cyclohydrolase FE240_10525 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FE240_10530 PF06942 GlpM protein FE240_10535 PF02678 Pirin FE240_10535 PF05726 Pirin C-terminal cupin domain FE240_10540 PF13406 Transglycosylase SLT domain FE240_10545 PF00265 Thymidine kinase FE240_10550 PF03553 Na+/H+ antiporter family FE240_10555 PF00816 H-NS histone family FE240_10560 PF01923 Cobalamin adenosyltransferase FE240_10565 PF12843 Putative quorum-sensing-regulated virulence factor FE240_10570 PF04055 Radical SAM superfamily FE240_10575 PF06508 Queuosine biosynthesis protein QueC FE240_10590 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FE240_10595 PF18073 Rubredoxin metal binding domain FE240_10605 PF00216 Bacterial DNA-binding protein FE240_10610 PF00575 S1 RNA binding domain FE240_10615 PF02224 Cytidylate kinase FE240_10620 PF00925 GTP cyclohydrolase II FE240_10640 PF09588 YqaJ-like viral recombinase domain FE240_10650 PF00239 Resolvase, N terminal domain FE240_10650 PF02796 Helix-turn-helix domain of resolvase FE240_10745 PF02463 RecF/RecN/SMC N terminal domain FE240_10810 PF00529 HlyD membrane-fusion protein of T1SS FE240_10810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_10815 PF03412 Peptidase C39 family FE240_10815 PF00005 ABC transporter FE240_10815 PF00664 ABC transporter transmembrane region FE240_10820 PF16199 Radical_SAM C-terminal domain FE240_10820 PF04055 Radical SAM superfamily FE240_10825 PF04898 Glutamate synthase central domain FE240_10825 PF00310 Glutamine amidotransferases class-II FE240_10825 PF01493 GXGXG motif FE240_10825 PF01645 Conserved region in glutamate synthase FE240_10830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FE240_10830 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_10835 PF01914 MarC family integral membrane protein FE240_10850 PF01048 Phosphorylase superfamily FE240_10860 PF01497 Periplasmic binding protein FE240_10865 PF00581 Rhodanese-like domain FE240_10870 PF03458 UPF0126 domain FE240_10885 PF00266 Aminotransferase class-V FE240_10890 PF07702 UTRA domain FE240_10890 PF00392 Bacterial regulatory proteins, gntR family FE240_10900 PF00005 ABC transporter FE240_10905 PF00528 Binding-protein-dependent transport system inner membrane component FE240_10910 PF02568 Thiamine biosynthesis protein (ThiI) FE240_10910 PF02926 THUMP domain FE240_10920 PF07690 Major Facilitator Superfamily FE240_10925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE240_10925 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_10930 PF13188 PAS domain FE240_10930 PF00563 EAL domain FE240_10930 PF03707 Bacterial signalling protein N terminal repeat FE240_10930 PF00990 Diguanylate cyclase, GGDEF domain FE240_10935 PF04055 Radical SAM superfamily FE240_10945 PF00528 Binding-protein-dependent transport system inner membrane component FE240_10950 PF00528 Binding-protein-dependent transport system inner membrane component FE240_10955 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_10960 PF00005 ABC transporter FE240_10965 PF03956 Lysine exporter LysO FE240_10970 PF00375 Sodium:dicarboxylate symporter family FE240_10975 PF01131 DNA topoisomerase FE240_10975 PF01751 Toprim domain FE240_10975 PF01396 Topoisomerase DNA binding C4 zinc finger FE240_10975 PF08272 Topoisomerase I zinc-ribbon-like FE240_10980 PF04996 Succinylarginine dihydrolase FE240_10985 PF01343 Peptidase family S49 FE240_10985 PF08496 Peptidase family S49 N-terminal FE240_10990 PF00106 short chain dehydrogenase FE240_10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_10995 PF03466 LysR substrate binding domain FE240_11000 PF07690 Major Facilitator Superfamily FE240_11005 PF00155 Aminotransferase class I and II FE240_11020 PF00709 Adenylosuccinate synthetase FE240_11025 PF01219 Prokaryotic diacylglycerol kinase FE240_11040 PF01740 STAS domain FE240_11040 PF00916 Sulfate permease family FE240_11105 PF14659 Phage integrase, N-terminal SAM-like domain FE240_11105 PF13356 Arm DNA-binding domain FE240_11105 PF00589 Phage integrase family FE240_11115 PF05154 TM2 domain FE240_11130 PF01367 5'-3' exonuclease, C-terminal SAM fold FE240_11130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FE240_11130 PF00476 DNA polymerase family A FE240_11130 PF01612 3'-5' exonuclease FE240_11165 PF00313 'Cold-shock' DNA-binding domain FE240_11170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FE240_11170 PF02817 e3 binding domain FE240_11170 PF00364 Biotin-requiring enzyme FE240_11175 PF02779 Transketolase, pyrimidine binding domain FE240_11175 PF02780 Transketolase, C-terminal domain FE240_11180 PF00676 Dehydrogenase E1 component FE240_11185 PF09335 SNARE associated Golgi protein FE240_11215 PF00672 HAMP domain FE240_11215 PF12729 Four helix bundle sensory module for signal transduction FE240_11215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_11225 PF08448 PAS fold FE240_11225 PF00990 Diguanylate cyclase, GGDEF domain FE240_11230 PF07759 Protein of unknown function (DUF1615) FE240_11235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FE240_11235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE240_11235 PF02142 MGS-like domain FE240_11240 PF00117 Glutamine amidotransferase class-I FE240_11240 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FE240_11245 PF01113 Dihydrodipicolinate reductase, N-terminus FE240_11245 PF05173 Dihydrodipicolinate reductase, C-terminus FE240_11255 PF01812 5-formyltetrahydrofolate cyclo-ligase family FE240_11260 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FE240_11265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE240_11265 PF01842 ACT domain FE240_11265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE240_11270 PF10725 Protein of unknown function (DUF2517) FE240_11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_11285 PF00512 His Kinase A (phospho-acceptor) domain FE240_11285 PF00072 Response regulator receiver domain FE240_11285 PF09308 LuxQ, periplasmic FE240_11290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_11295 PF00528 Binding-protein-dependent transport system inner membrane component FE240_11300 PF00528 Binding-protein-dependent transport system inner membrane component FE240_11300 PF12911 N-terminal TM domain of oligopeptide transport permease C FE240_11305 PF00005 ABC transporter FE240_11305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE240_11310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE240_11310 PF00005 ABC transporter FE240_11320 PF01869 BadF/BadG/BcrA/BcrD ATPase family FE240_11325 PF02838 Glycosyl hydrolase family 20, domain 2 FE240_11325 PF00728 Glycosyl hydrolase family 20, catalytic domain FE240_11330 PF13737 Transposase DDE domain FE240_11335 PF08447 PAS fold FE240_11335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_11340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_11340 PF08447 PAS fold FE240_11355 PF00842 Alanine racemase, C-terminal domain FE240_11355 PF01168 Alanine racemase, N-terminal domain FE240_11360 PF03741 Integral membrane protein TerC family FE240_11365 PF00005 ABC transporter FE240_11365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE240_11370 PF00005 ABC transporter FE240_11370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE240_11375 PF00528 Binding-protein-dependent transport system inner membrane component FE240_11375 PF12911 N-terminal TM domain of oligopeptide transport permease C FE240_11380 PF00528 Binding-protein-dependent transport system inner membrane component FE240_11385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_11390 PF01914 MarC family integral membrane protein FE240_11395 PF00465 Iron-containing alcohol dehydrogenase FE240_11395 PF00171 Aldehyde dehydrogenase family FE240_11400 PF00072 Response regulator receiver domain FE240_11405 PF01709 Transcriptional regulator FE240_11410 PF01336 OB-fold nucleic acid binding domain FE240_11410 PF00152 tRNA synthetases class II (D, K and N) FE240_11410 PF02938 GAD domain FE240_11420 PF01904 Protein of unknown function DUF72 FE240_11425 PF13649 Methyltransferase domain FE240_11430 PF08003 Protein of unknown function (DUF1698) FE240_11450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_11450 PF03466 LysR substrate binding domain FE240_11455 PF00860 Permease family FE240_11460 PF00390 Malic enzyme, N-terminal domain FE240_11460 PF03949 Malic enzyme, NAD binding domain FE240_11480 PF13737 Transposase DDE domain FE240_11490 PF11842 Domain of unknown function (DUF3362) FE240_11490 PF08497 Radical SAM N-terminal FE240_11490 PF04055 Radical SAM superfamily FE240_11495 PF00873 AcrB/AcrD/AcrF family FE240_11500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_11515 PF17156 Gammaproteobacterial periplasmic sensor domain FE240_11515 PF00990 Diguanylate cyclase, GGDEF domain FE240_11520 PF01734 Patatin-like phospholipase FE240_11535 PF01389 OmpA-like transmembrane domain FE240_11535 PF00691 OmpA family FE240_11540 PF01389 OmpA-like transmembrane domain FE240_11540 PF00691 OmpA family FE240_11550 PF03658 RnfH family Ubiquitin FE240_11555 PF03364 Polyketide cyclase / dehydrase and lipid transport FE240_11560 PF01668 SmpB protein FE240_11575 PF13737 Transposase DDE domain FE240_11610 PF13737 Transposase DDE domain FE240_11615 PF13426 PAS domain FE240_11615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_11615 PF08447 PAS fold FE240_11625 PF08543 Phosphomethylpyrimidine kinase FE240_11630 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FE240_11630 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FE240_11630 PF01276 Orn/Lys/Arg decarboxylase, major domain FE240_11635 PF13520 Amino acid permease FE240_11640 PF00486 Transcriptional regulatory protein, C terminal FE240_11640 PF18500 CadC C-terminal domain 1 FE240_11645 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FE240_11650 PF14579 Helix-hairpin-helix motif FE240_11650 PF02811 PHP domain FE240_11650 PF01336 OB-fold nucleic acid binding domain FE240_11650 PF07733 Bacterial DNA polymerase III alpha NTPase domain FE240_11650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FE240_11655 PF01351 Ribonuclease HII FE240_11660 PF02684 Lipid-A-disaccharide synthetase FE240_11665 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FE240_11665 PF00132 Bacterial transferase hexapeptide (six repeats) FE240_11670 PF07977 FabA-like domain FE240_11675 PF00132 Bacterial transferase hexapeptide (six repeats) FE240_11675 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FE240_11685 PF07244 Surface antigen variable number repeat FE240_11685 PF01103 Surface antigen FE240_11690 PF02163 Peptidase family M50 FE240_11690 PF17820 PDZ domain FE240_11695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FE240_11695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FE240_11695 PF13288 DXP reductoisomerase C-terminal domain FE240_11705 PF01255 Putative undecaprenyl diphosphate synthase FE240_11710 PF01765 Ribosome recycling factor FE240_11715 PF00696 Amino acid kinase family FE240_11720 PF00889 Elongation factor TS FE240_11725 PF00318 Ribosomal protein S2 FE240_11730 PF00557 Metallopeptidase family M24 FE240_11735 PF01842 ACT domain FE240_11735 PF08335 GlnD PII-uridylyltransferase FE240_11735 PF01909 Nucleotidyltransferase domain FE240_11735 PF01966 HD domain FE240_11740 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FE240_11740 PF00132 Bacterial transferase hexapeptide (six repeats) FE240_11740 PF14602 Hexapeptide repeat of succinyl-transferase FE240_11745 PF11944 Protein of unknown function (DUF3461) FE240_11750 PF00367 phosphotransferase system, EIIB FE240_11750 PF02378 Phosphotransferase system, EIIC FE240_11755 PF07148 Maltose operon periplasmic protein precursor (MalM) FE240_11760 PF02264 LamB porin FE240_11765 PF03949 Malic enzyme, NAD binding domain FE240_11765 PF00390 Malic enzyme, N-terminal domain FE240_11770 PF02311 AraC-like ligand binding domain FE240_11770 PF12833 Helix-turn-helix domain FE240_11775 PF01554 MatE FE240_11780 PF10692 Protein of unknown function (DUF2498) FE240_11785 PF00990 Diguanylate cyclase, GGDEF domain FE240_11795 PF01235 Sodium:alanine symporter family FE240_11800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FE240_11800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FE240_11805 PF01699 Sodium/calcium exchanger protein FE240_11810 PF08534 Redoxin FE240_11815 PF00293 NUDIX domain FE240_11820 PF00005 ABC transporter FE240_11825 PF00528 Binding-protein-dependent transport system inner membrane component FE240_11830 PF00528 Binding-protein-dependent transport system inner membrane component FE240_11835 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_11840 PF06526 Protein of unknown function (DUF1107) FE240_11850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE240_11850 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FE240_11855 PF03932 CutC family FE240_11860 PF00480 ROK family FE240_11875 PF12849 PBP superfamily domain FE240_11880 PF11808 Phosphate regulon sensor protein PhoR FE240_11880 PF00989 PAS fold FE240_11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_11880 PF00512 His Kinase A (phospho-acceptor) domain FE240_11885 PF00072 Response regulator receiver domain FE240_11885 PF00486 Transcriptional regulatory protein, C terminal FE240_11890 PF03573 outer membrane porin, OprD family FE240_11895 PF00106 short chain dehydrogenase FE240_11910 PF01713 Smr domain FE240_11915 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FE240_11920 PF06029 AlkA N-terminal domain FE240_11920 PF00730 HhH-GPD superfamily base excision DNA repair protein FE240_11920 PF02805 Metal binding domain of Ada FE240_11920 PF12833 Helix-turn-helix domain FE240_11925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FE240_11925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FE240_11935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_11940 PF13476 AAA domain FE240_11945 PF12320 Type 5 capsule protein repressor C-terminal domain FE240_11945 PF00149 Calcineurin-like phosphoesterase FE240_11955 PF04381 Putative exonuclease, RdgC FE240_11960 PF02887 Pyruvate kinase, alpha/beta domain FE240_11960 PF00224 Pyruvate kinase, barrel domain FE240_11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_11965 PF03466 LysR substrate binding domain FE240_11970 PF01810 LysE type translocator FE240_11985 PF00367 phosphotransferase system, EIIB FE240_11985 PF02378 Phosphotransferase system, EIIC FE240_11990 PF02449 Beta-galactosidase FE240_11990 PF08532 Beta-galactosidase trimerisation domain FE240_11990 PF08533 Beta-galactosidase C-terminal domain FE240_11995 PF07745 Glycosyl hydrolase family 53 FE240_12000 PF00528 Binding-protein-dependent transport system inner membrane component FE240_12005 PF00528 Binding-protein-dependent transport system inner membrane component FE240_12010 PF13416 Bacterial extracellular solute-binding protein FE240_12015 PF17912 MalK OB fold domain FE240_12015 PF00005 ABC transporter FE240_12030 PF07745 Glycosyl hydrolase family 53 FE240_12035 PF02264 LamB porin FE240_12040 PF00356 Bacterial regulatory proteins, lacI family FE240_12045 PF12392 Collagenase FE240_12045 PF01136 Peptidase family U32 FE240_12050 PF01810 LysE type translocator FE240_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_12055 PF03466 LysR substrate binding domain FE240_12060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FE240_12060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FE240_12070 PF00171 Aldehyde dehydrogenase family FE240_12080 PF00465 Iron-containing alcohol dehydrogenase FE240_12100 PF01554 MatE FE240_12115 PF00501 AMP-binding enzyme FE240_12125 PF00106 short chain dehydrogenase FE240_12135 PF00072 Response regulator receiver domain FE240_12135 PF00486 Transcriptional regulatory protein, C terminal FE240_12140 PF00512 His Kinase A (phospho-acceptor) domain FE240_12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_12140 PF08521 Two-component sensor kinase N-terminal FE240_12150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE240_12150 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FE240_12150 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FE240_12150 PF10371 Domain of unknown function FE240_12150 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FE240_12155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FE240_12155 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_12160 PF03476 MOSC N-terminal beta barrel domain FE240_12160 PF03473 MOSC domain FE240_12160 PF03476 MOSC N-terminal beta barrel domain FE240_12160 PF03473 MOSC domain FE240_12160 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_12160 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_12165 PF01435 Peptidase family M48 FE240_12175 PF08241 Methyltransferase domain FE240_12180 PF00155 Aminotransferase class I and II FE240_12185 PF06968 Biotin and Thiamin Synthesis associated domain FE240_12185 PF04055 Radical SAM superfamily FE240_12190 PF00202 Aminotransferase class-III FE240_12200 PF01336 OB-fold nucleic acid binding domain FE240_12200 PF00152 tRNA synthetases class II (D, K and N) FE240_12205 PF03605 Anaerobic c4-dicarboxylate membrane transporter FE240_12215 PF00990 Diguanylate cyclase, GGDEF domain FE240_12215 PF17152 Periplasmic sensor domain FE240_12220 PF09179 TilS substrate binding domain FE240_12220 PF11734 TilS substrate C-terminal domain FE240_12220 PF01171 PP-loop family FE240_12225 PF05649 Peptidase family M13 FE240_12225 PF01431 Peptidase family M13 FE240_12235 PF00258 Flavodoxin FE240_12240 PF00849 RNA pseudouridylate synthase FE240_12245 PF04287 tRNA pseudouridine synthase C FE240_12270 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FE240_12275 PF00892 EamA-like transporter family FE240_12280 PF07348 Syd protein (SUKH-2) FE240_12285 PF14489 QueF-like protein FE240_12285 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FE240_12295 PF00990 Diguanylate cyclase, GGDEF domain FE240_12300 PF03641 Possible lysine decarboxylase FE240_12300 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FE240_12300 PF11892 Domain of unknown function (DUF3412) FE240_12305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FE240_12305 PF01367 5'-3' exonuclease, C-terminal SAM fold FE240_12310 PF00180 Isocitrate/isopropylmalate dehydrogenase FE240_12310 PF18324 Hypothetical protein TT1725 FE240_12320 PF01728 FtsJ-like methyltransferase FE240_12320 PF18125 RlmM ferredoxin-like domain FE240_12335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_12335 PF03466 LysR substrate binding domain FE240_12340 PF11798 IMS family HHH motif FE240_12340 PF00817 impB/mucB/samB family FE240_12340 PF11799 impB/mucB/samB family C-terminal domain FE240_12355 PF04400 (Na+)-NQR maturation NqrM FE240_12360 PF02424 ApbE family FE240_12365 PF00175 Oxidoreductase NAD-binding domain FE240_12365 PF00970 Oxidoreductase FAD-binding domain FE240_12365 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_12370 PF02508 Rnf-Nqr subunit, membrane protein FE240_12375 PF02508 Rnf-Nqr subunit, membrane protein FE240_12380 PF04205 FMN-binding domain FE240_12385 PF03116 NQR2, RnfD, RnfE family FE240_12390 PF11973 NQRA C-terminal domain FE240_12390 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FE240_12395 PF01722 BolA-like protein FE240_12405 PF05175 Methyltransferase small domain FE240_12415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FE240_12420 PF07690 Major Facilitator Superfamily FE240_12425 PF03502 Nucleoside-specific channel-forming protein, Tsx FE240_12430 PF04461 Protein of unknown function (DUF520) FE240_12435 PF02558 Ketopantoate reductase PanE/ApbA FE240_12435 PF08546 Ketopantoate reductase PanE/ApbA C terminal FE240_12440 PF01965 DJ-1/PfpI family FE240_12450 PF00883 Cytosol aminopeptidase family, catalytic domain FE240_12450 PF12404 Peptidase FE240_12455 PF12404 Peptidase FE240_12455 PF00883 Cytosol aminopeptidase family, catalytic domain FE240_12460 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_12465 PF00012 Hsp70 protein FE240_12470 PF00226 DnaJ domain FE240_12470 PF07743 HSCB C-terminal oligomerisation domain FE240_12475 PF01521 Iron-sulphur cluster biosynthesis FE240_12480 PF01592 NifU-like N terminal domain FE240_12485 PF00266 Aminotransferase class-V FE240_12490 PF02082 Transcriptional regulator FE240_12495 PF00588 SpoU rRNA Methylase family FE240_12505 PF02036 SCP-2 sterol transfer family FE240_12510 PF01136 Peptidase family U32 FE240_12515 PF01136 Peptidase family U32 FE240_12520 PF07719 Tetratricopeptide repeat FE240_12520 PF13181 Tetratricopeptide repeat FE240_12525 PF00581 Rhodanese-like domain FE240_12530 PF02355 Protein export membrane protein FE240_12530 PF07549 SecD/SecF GG Motif FE240_12535 PF13721 SecD export protein N-terminal TM region FE240_12535 PF02355 Protein export membrane protein FE240_12535 PF07549 SecD/SecF GG Motif FE240_12540 PF02699 Preprotein translocase subunit FE240_12545 PF01702 Queuine tRNA-ribosyltransferase FE240_12550 PF02547 Queuosine biosynthesis protein FE240_12555 PF00571 CBS domain FE240_12560 PF04336 Acyl carrier protein phosphodiesterase FE240_12570 PF03960 ArsC family FE240_12580 PF01435 Peptidase family M48 FE240_12580 PF07720 Tetratricopeptide repeat FE240_12585 PF01206 Sulfurtransferase TusA FE240_12590 PF01594 AI-2E family transporter FE240_12595 PF00561 alpha/beta hydrolase fold FE240_12600 PF03976 Polyphosphate kinase 2 (PPK2) FE240_12605 PF00005 ABC transporter FE240_12605 PF08402 TOBE domain FE240_12610 PF00528 Binding-protein-dependent transport system inner membrane component FE240_12615 PF14785 Maltose transport system permease protein MalF P2 domain FE240_12615 PF00528 Binding-protein-dependent transport system inner membrane component FE240_12620 PF01547 Bacterial extracellular solute-binding protein FE240_12625 PF04245 37-kD nucleoid-associated bacterial protein FE240_12630 PF07208 Protein of unknown function (DUF1414) FE240_12635 PF11893 Domain of unknown function (DUF3413) FE240_12635 PF00884 Sulfatase FE240_12645 PF16363 GDP-mannose 4,6 dehydratase FE240_12650 PF00175 Oxidoreductase NAD-binding domain FE240_12650 PF00111 2Fe-2S iron-sulfur cluster binding domain FE240_12650 PF00970 Oxidoreductase FAD-binding domain FE240_12655 PF03063 Prismane/CO dehydrogenase family FE240_12660 PF00210 Ferritin-like domain FE240_12665 PF00875 DNA photolyase FE240_12665 PF03441 FAD binding domain of DNA photolyase FE240_12670 PF13411 MerR HTH family regulatory protein FE240_12675 PF08349 Protein of unknown function (DUF1722) FE240_12700 PF01817 Chorismate mutase type II FE240_12700 PF00800 Prephenate dehydratase FE240_12735 PF01434 Peptidase family M41 FE240_12735 PF17862 AAA+ lid domain FE240_12735 PF00004 ATPase family associated with various cellular activities (AAA) FE240_12800 PF07690 Major Facilitator Superfamily FE240_12805 PF01040 UbiA prenyltransferase family FE240_12810 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FE240_12815 PF00510 Cytochrome c oxidase subunit III FE240_12820 PF00115 Cytochrome C and Quinol oxidase polypeptide I FE240_12825 PF06481 COX Aromatic Rich Motif FE240_12825 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FE240_12830 PF05656 Protein of unknown function (DUF805) FE240_12835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FE240_12835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FE240_12835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FE240_12835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FE240_12840 PF00483 Nucleotidyl transferase FE240_12840 PF01050 Mannose-6-phosphate isomerase FE240_12850 PF01501 Glycosyl transferase family 8 FE240_12870 PF00150 Cellulase (glycosyl hydrolase family 5) FE240_12875 PF13439 Glycosyltransferase Family 4 FE240_12875 PF00534 Glycosyl transferases group 1 FE240_12890 PF09721 Transmembrane exosortase (Exosortase_EpsH) FE240_12895 PF13807 G-rich domain on putative tyrosine kinase FE240_12895 PF02706 Chain length determinant protein FE240_12895 PF13614 AAA domain FE240_12915 PF02397 Bacterial sugar transferase FE240_12935 PF04954 Siderophore-interacting protein FE240_12935 PF08021 Siderophore-interacting FAD-binding domain FE240_12940 PF00127 Copper binding proteins, plastocyanin/azurin family FE240_12945 PF02635 DsrE/DsrF-like family FE240_12950 PF12792 CSS motif domain associated with EAL FE240_12950 PF00563 EAL domain FE240_12955 PF00011 Hsp20/alpha crystallin family FE240_12960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE240_12960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FE240_12965 PF00593 TonB dependent receptor FE240_12965 PF07715 TonB-dependent Receptor Plug Domain FE240_12970 PF01464 Transglycosylase SLT domain FE240_12975 PF00230 Major intrinsic protein FE240_12980 PF02075 Crossover junction endodeoxyribonuclease RuvC FE240_12990 PF00892 EamA-like transporter family FE240_12995 PF12431 Transcriptional regulator FE240_12995 PF00072 Response regulator receiver domain FE240_13000 PF17203 Single cache domain 3 FE240_13000 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FE240_13000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_13000 PF00989 PAS fold FE240_13005 PF01047 MarR family FE240_13010 PF13533 Biotin-lipoyl like FE240_13025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE240_13025 PF00005 ABC transporter FE240_13030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE240_13030 PF00005 ABC transporter FE240_13035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_13040 PF00528 Binding-protein-dependent transport system inner membrane component FE240_13040 PF12911 N-terminal TM domain of oligopeptide transport permease C FE240_13045 PF00528 Binding-protein-dependent transport system inner membrane component FE240_13050 PF07715 TonB-dependent Receptor Plug Domain FE240_13050 PF00593 TonB dependent receptor FE240_13060 PF01618 MotA/TolQ/ExbB proton channel family FE240_13065 PF01618 MotA/TolQ/ExbB proton channel family FE240_13070 PF02472 Biopolymer transport protein ExbD/TolR FE240_13085 PF00005 ABC transporter FE240_13085 PF09383 NIL domain FE240_13090 PF00528 Binding-protein-dependent transport system inner membrane component FE240_13095 PF03180 NLPA lipoprotein FE240_13100 PF02357 Transcription termination factor nusG FE240_13110 PF13286 Phosphohydrolase-associated domain FE240_13110 PF01966 HD domain FE240_13115 PF01627 Hpt domain FE240_13115 PF18415 Histidine kinase receptor ArcB trans-membrane domain FE240_13115 PF00512 His Kinase A (phospho-acceptor) domain FE240_13115 PF00989 PAS fold FE240_13115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_13115 PF00072 Response regulator receiver domain FE240_13125 PF01266 FAD dependent oxidoreductase FE240_13130 PF01116 Fructose-bisphosphate aldolase class-II FE240_13135 PF00162 Phosphoglycerate kinase FE240_13140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FE240_13140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FE240_13145 PF00480 ROK family FE240_13150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FE240_13150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE240_13160 PF04102 SlyX FE240_13165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE240_13170 PF09526 Probable metal-binding protein (DUF2387) FE240_13180 PF01584 CheW-like domain FE240_13180 PF00072 Response regulator receiver domain FE240_13185 PF00561 alpha/beta hydrolase fold FE240_13190 PF01590 GAF domain FE240_13190 PF00563 EAL domain FE240_13190 PF00990 Diguanylate cyclase, GGDEF domain FE240_13190 PF00360 Phytochrome region FE240_13200 PF06794 Uncharacterised protein family (UPF0270) FE240_13205 PF00485 Phosphoribulokinase / Uridine kinase family FE240_13220 PF02566 OsmC-like protein FE240_13225 PF13545 Crp-like helix-turn-helix domain FE240_13225 PF00027 Cyclic nucleotide-binding domain FE240_13230 PF13847 Methyltransferase domain FE240_13235 PF00106 short chain dehydrogenase FE240_13250 PF00378 Enoyl-CoA hydratase/isomerase FE240_13255 PF10952 Protein of unknown function (DUF2753) FE240_13260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE240_13270 PF01207 Dihydrouridine synthase (Dus) FE240_13285 PF00313 'Cold-shock' DNA-binding domain FE240_13290 PF00293 NUDIX domain FE240_13295 PF13737 Transposase DDE domain FE240_13310 PF02872 5'-nucleotidase, C-terminal domain FE240_13310 PF00149 Calcineurin-like phosphoesterase FE240_13330 PF00072 Response regulator receiver domain FE240_13330 PF02954 Bacterial regulatory protein, Fis family FE240_13330 PF00158 Sigma-54 interaction domain FE240_13350 PF02779 Transketolase, pyrimidine binding domain FE240_13350 PF00456 Transketolase, thiamine diphosphate binding domain FE240_13350 PF02780 Transketolase, C-terminal domain FE240_13355 PF00438 S-adenosylmethionine synthetase, N-terminal domain FE240_13355 PF02772 S-adenosylmethionine synthetase, central domain FE240_13355 PF02773 S-adenosylmethionine synthetase, C-terminal domain FE240_13360 PF10263 SprT-like family FE240_13360 PF17283 SprT-like zinc ribbon domain FE240_13365 PF04231 Endonuclease I FE240_13370 PF04452 RNA methyltransferase FE240_13375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FE240_13375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FE240_13380 PF02622 Uncharacterized ACR, COG1678 FE240_13385 PF03652 Holliday junction resolvase FE240_13400 PF13737 Transposase DDE domain FE240_13420 PF13953 PapC C-terminal domain FE240_13420 PF13954 PapC N-terminal domain FE240_13420 PF00577 Outer membrane usher protein FE240_13425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE240_13425 PF02753 Pili assembly chaperone PapD, C-terminal domain FE240_13435 PF01235 Sodium:alanine symporter family FE240_13440 PF00923 Transaldolase/Fructose-6-phosphate aldolase FE240_13455 PF03167 Uracil DNA glycosylase superfamily FE240_13460 PF01228 Glycine radical FE240_13465 PF00113 Enolase, C-terminal TIM barrel domain FE240_13465 PF03952 Enolase, N-terminal domain FE240_13470 PF06418 CTP synthase N-terminus FE240_13470 PF00117 Glutamine amidotransferase class-I FE240_13475 PF03819 MazG nucleotide pyrophosphohydrolase domain FE240_13480 PF04607 Region found in RelA / SpoT proteins FE240_13480 PF13291 ACT domain FE240_13480 PF02824 TGS domain FE240_13485 PF01938 TRAM domain FE240_13485 PF05958 tRNA (Uracil-5-)-methyltransferase FE240_13490 PF00512 His Kinase A (phospho-acceptor) domain FE240_13490 PF00072 Response regulator receiver domain FE240_13490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FE240_13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_13490 PF01627 Hpt domain FE240_13490 PF00672 HAMP domain FE240_13495 PF07308 Protein of unknown function (DUF1456) FE240_13500 PF01510 N-acetylmuramoyl-L-alanine amidase FE240_13505 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FE240_13510 PF11967 Recombination protein O N terminal FE240_13510 PF02565 Recombination protein O C terminal FE240_13515 PF07650 KH domain FE240_13515 PF01926 50S ribosome-binding GTPase FE240_13520 PF00035 Double-stranded RNA binding motif FE240_13520 PF14622 Ribonuclease-III-like FE240_13525 PF10502 Signal peptidase, peptidase S26 FE240_13530 PF03144 Elongation factor Tu domain 2 FE240_13530 PF00679 Elongation factor G C-terminus FE240_13530 PF00009 Elongation factor Tu GTP binding domain FE240_13530 PF06421 GTP-binding protein LepA C-terminus FE240_13540 PF03888 MucB/RseB N-terminal domain FE240_13540 PF17188 MucB/RseB C-terminal domain FE240_13545 PF03873 Anti sigma-E protein RseA, C-terminal domain FE240_13545 PF03872 Anti sigma-E protein RseA, N-terminal domain FE240_13550 PF08281 Sigma-70, region 4 FE240_13550 PF04542 Sigma-70 region 2 FE240_13555 PF00890 FAD binding domain FE240_13555 PF02910 Fumarate reductase flavoprotein C-term FE240_13565 PF10415 Fumarase C C-terminus FE240_13565 PF00206 Lyase FE240_13575 PF01894 Uncharacterised protein family UPF0047 FE240_13580 PF00842 Alanine racemase, C-terminal domain FE240_13580 PF01168 Alanine racemase, N-terminal domain FE240_13585 PF03796 DnaB-like helicase C terminal domain FE240_13585 PF00772 DnaB-like helicase N terminal domain FE240_13595 PF05728 Uncharacterised protein family (UPF0227) FE240_13600 PF00149 Calcineurin-like phosphoesterase FE240_13610 PF00293 NUDIX domain FE240_13615 PF02321 Outer membrane efflux protein FE240_13630 PF04012 PspA/IM30 family FE240_13635 PF01553 Acyltransferase FE240_13650 PF03466 LysR substrate binding domain FE240_13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_13655 PF00106 short chain dehydrogenase FE240_13675 PF00521 DNA gyrase/topoisomerase IV, subunit A FE240_13675 PF03989 DNA gyrase C-terminal domain, beta-propeller FE240_13680 PF03992 Antibiotic biosynthesis monooxygenase FE240_13685 PF01751 Toprim domain FE240_13685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_13685 PF00986 DNA gyrase B subunit, carboxyl terminus FE240_13685 PF00204 DNA gyrase B FE240_13690 PF00293 NUDIX domain FE240_13700 PF03937 Flavinator of succinate dehydrogenase FE240_13705 PF01571 Aminomethyltransferase folate-binding domain FE240_13725 PF03091 CutA1 divalent ion tolerance protein FE240_13730 PF11412 Disulphide bond corrector protein DsbC FE240_13730 PF02683 Cytochrome C biogenesis protein transmembrane region FE240_13740 PF01208 Uroporphyrinogen decarboxylase (URO-D) FE240_13745 PF00293 NUDIX domain FE240_13745 PF09297 NADH pyrophosphatase zinc ribbon domain FE240_13750 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FE240_13755 PF07238 PilZ domain FE240_13760 PF07238 PilZ domain FE240_13765 PF03883 Peroxide stress protein YaaA FE240_13770 PF00437 Type II/IV secretion system protein FE240_13775 PF00437 Type II/IV secretion system protein FE240_13780 PF01168 Alanine racemase, N-terminal domain FE240_13785 PF02325 YGGT family FE240_13790 PF02594 Uncharacterised ACR, YggU family COG1872 FE240_13805 PF00216 Bacterial DNA-binding protein FE240_13810 PF04545 Sigma-70, region 4 FE240_13810 PF04539 Sigma-70 region 3 FE240_13810 PF04542 Sigma-70 region 2 FE240_13810 PF00140 Sigma-70 factor, region 1.2 FE240_13815 PF01551 Peptidase family M23 FE240_13815 PF01476 LysM domain FE240_13820 PF09335 SNARE associated Golgi protein FE240_13830 PF01975 Survival protein SurE FE240_13835 PF01142 tRNA pseudouridine synthase D (TruD) FE240_13840 PF02542 YgbB family FE240_13845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FE240_13850 PF04977 Septum formation initiator FE240_13855 PF00375 Sodium:dicarboxylate symporter family FE240_13860 PF00793 DAHP synthetase I family FE240_13865 PF13369 Transglutaminase-like superfamily FE240_13875 PF13847 Methyltransferase domain FE240_13875 PF17827 PrmC N-terminal domain FE240_13880 PF00472 RF-1 domain FE240_13880 PF03462 PCRF domain FE240_13885 PF01488 Shikimate / quinate 5-dehydrogenase FE240_13885 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FE240_13885 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FE240_13890 PF03550 Outer membrane lipoprotein LolB FE240_13895 PF00288 GHMP kinases N terminal domain FE240_13895 PF08544 GHMP kinases C terminal FE240_13900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FE240_13900 PF14572 Phosphoribosyl synthetase-associated domain FE240_13905 PF01195 Peptidyl-tRNA hydrolase FE240_13910 PF06071 Protein of unknown function (DUF933) FE240_13910 PF01926 50S ribosome-binding GTPase FE240_13920 PF09588 YqaJ-like viral recombinase domain FE240_13970 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FE240_13970 PF18766 SWI2/SNF2 ATPase FE240_13970 PF11867 Domain of unknown function (DUF3387) FE240_13975 PF01420 Type I restriction modification DNA specificity domain FE240_14000 PF00717 Peptidase S24-like FE240_14005 PF13438 Domain of unknown function (DUF4113) FE240_14005 PF00817 impB/mucB/samB family FE240_14005 PF11799 impB/mucB/samB family C-terminal domain FE240_14005 PF11798 IMS family HHH motif FE240_14010 PF00271 Helicase conserved C-terminal domain FE240_14085 PF02080 TrkA-C domain FE240_14085 PF03600 Citrate transporter FE240_14090 PF00330 Aconitase family (aconitate hydratase) FE240_14090 PF06434 Aconitate hydratase 2 N-terminus FE240_14090 PF11791 Aconitate B N-terminal domain FE240_14095 PF01734 Patatin-like phospholipase FE240_14105 PF00990 Diguanylate cyclase, GGDEF domain FE240_14110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE240_14110 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_14115 PF00364 Biotin-requiring enzyme FE240_14115 PF02817 e3 binding domain FE240_14115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FE240_14120 PF00456 Transketolase, thiamine diphosphate binding domain FE240_14120 PF17831 Pyruvate dehydrogenase E1 component middle domain FE240_14125 PF00392 Bacterial regulatory proteins, gntR family FE240_14125 PF07729 FCD domain FE240_14130 PF01510 N-acetylmuramoyl-L-alanine amidase FE240_14140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FE240_14140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FE240_14145 PF07963 Prokaryotic N-terminal methylation motif FE240_14150 PF00437 Type II/IV secretion system protein FE240_14150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FE240_14160 PF06750 Bacterial Peptidase A24 N-terminal domain FE240_14160 PF01478 Type IV leader peptidase family FE240_14165 PF01121 Dephospho-CoA kinase FE240_14170 PF07072 Cell division protein FE240_14175 PF03884 DNA gyrase inhibitor YacG FE240_14180 PF00293 NUDIX domain FE240_14185 PF07517 SecA DEAD-like domain FE240_14185 PF01043 SecA preprotein cross-linking domain FE240_14185 PF07516 SecA Wing and Scaffold domain FE240_14185 PF02810 SEC-C motif FE240_14195 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FE240_14200 PF12327 FtsZ family, C-terminal domain FE240_14200 PF00091 Tubulin/FtsZ family, GTPase domain FE240_14205 PF02491 SHS2 domain inserted in FTSA FE240_14210 PF08478 POTRA domain, FtsQ-type FE240_14210 PF03799 Cell division protein FtsQ FE240_14215 PF01225 Mur ligase family, catalytic domain FE240_14215 PF02875 Mur ligase family, glutamate ligase domain FE240_14215 PF08245 Mur ligase middle domain FE240_14220 PF04101 Glycosyltransferase family 28 C-terminal domain FE240_14220 PF03033 Glycosyltransferase family 28 N-terminal domain FE240_14225 PF01098 Cell cycle protein FE240_14230 PF08245 Mur ligase middle domain FE240_14230 PF02875 Mur ligase family, glutamate ligase domain FE240_14235 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FE240_14235 PF00953 Glycosyl transferase family 4 FE240_14240 PF08245 Mur ligase middle domain FE240_14240 PF01225 Mur ligase family, catalytic domain FE240_14240 PF02875 Mur ligase family, glutamate ligase domain FE240_14245 PF02875 Mur ligase family, glutamate ligase domain FE240_14245 PF08245 Mur ligase middle domain FE240_14245 PF01225 Mur ligase family, catalytic domain FE240_14255 PF04999 Cell division protein FtsL FE240_14260 PF01795 MraW methylase family FE240_14265 PF02381 MraZ protein, putative antitoxin-like FE240_14275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FE240_14280 PF04348 LppC putative lipoprotein FE240_14285 PF02021 Uncharacterised protein family UPF0102 FE240_14290 PF13580 SIS domain FE240_14295 PF04972 BON domain FE240_14300 PF04386 Stringent starvation protein B FE240_14305 PF00043 Glutathione S-transferase, C-terminal domain FE240_14305 PF02798 Glutathione S-transferase, N-terminal domain FE240_14310 PF02167 Cytochrome C1 family FE240_14315 PF00033 Cytochrome b/b6/petB FE240_14315 PF00032 Cytochrome b(C-terminal)/b6/petD FE240_14320 PF00355 Rieske [2Fe-2S] domain FE240_14320 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FE240_14325 PF00380 Ribosomal protein S9/S16 FE240_14330 PF00572 Ribosomal protein L13 FE240_14335 PF03969 AFG1-like ATPase FE240_14345 PF00595 PDZ domain FE240_14345 PF13180 PDZ domain FE240_14350 PF13180 PDZ domain FE240_14355 PF00381 PTS HPr component phosphorylation site FE240_14360 PF03668 P-loop ATPase protein family FE240_14365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE240_14370 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FE240_14375 PF00309 Sigma-54 factor, Activator interacting domain (AID) FE240_14375 PF04552 Sigma-54, DNA binding domain FE240_14375 PF04963 Sigma-54 factor, core binding domain FE240_14380 PF00005 ABC transporter FE240_14380 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE240_14385 PF03968 OstA-like protein FE240_14400 PF00571 CBS domain FE240_14400 PF01380 SIS domain FE240_14405 PF00005 ABC transporter FE240_14410 PF02405 Permease MlaE FE240_14415 PF02470 MlaD protein FE240_14420 PF05494 MlaC protein FE240_14430 PF01722 BolA-like protein FE240_14435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FE240_14440 PF01523 Putative modulator of DNA gyrase FE240_14445 PF04751 Protein of unknown function (DUF615) FE240_14455 PF07690 Major Facilitator Superfamily FE240_14465 PF00175 Oxidoreductase NAD-binding domain FE240_14465 PF00970 Oxidoreductase FAD-binding domain FE240_14470 PF03948 Ribosomal protein L9, C-terminal domain FE240_14470 PF01281 Ribosomal protein L9, N-terminal domain FE240_14475 PF01084 Ribosomal protein S18 FE240_14480 PF01250 Ribosomal protein S6 FE240_14485 PF01566 Natural resistance-associated macrophage protein FE240_14525 PF11104 Type IV pilus assembly protein PilM; FE240_14530 PF00905 Penicillin binding protein transpeptidase domain FE240_14530 PF00912 Transglycosylase FE240_14530 PF17092 Penicillin-binding protein OB-like domain FE240_14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_14535 PF03466 LysR substrate binding domain FE240_14540 PF00152 tRNA synthetases class II (D, K and N) FE240_14540 PF01336 OB-fold nucleic acid binding domain FE240_14550 PF00672 HAMP domain FE240_14550 PF02743 Cache domain FE240_14550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_14555 PF01368 DHH family FE240_14555 PF02272 DHHA1 domain FE240_14555 PF17768 RecJ OB domain FE240_14565 PF01741 Large-conductance mechanosensitive channel, MscL FE240_14570 PF02899 Phage integrase, N-terminal SAM-like domain FE240_14570 PF00589 Phage integrase family FE240_14575 PF00258 Flavodoxin FE240_14580 PF01523 Putative modulator of DNA gyrase FE240_14590 PF03734 L,D-transpeptidase catalytic domain FE240_14590 PF17969 L,D-transpeptidase C-terminal domain FE240_14595 PF03734 L,D-transpeptidase catalytic domain FE240_14595 PF17969 L,D-transpeptidase C-terminal domain FE240_14635 PF02599 Global regulator protein family FE240_14640 PF00696 Amino acid kinase family FE240_14640 PF01842 ACT domain FE240_14640 PF13840 ACT domain FE240_14645 PF02272 DHHA1 domain FE240_14645 PF01411 tRNA synthetases class II (A) FE240_14645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FE240_14650 PF02631 RecX family FE240_14655 PF00154 recA bacterial DNA recombination protein FE240_14660 PF02464 Competence-damaged protein FE240_14665 PF00672 HAMP domain FE240_14665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_14665 PF02743 Cache domain FE240_14680 PF00239 Resolvase, N terminal domain FE240_14680 PF02796 Helix-turn-helix domain of resolvase FE240_14720 PF01609 Transposase DDE domain FE240_14720 PF05598 Transposase domain (DUF772) FE240_14725 PF00672 HAMP domain FE240_14725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_14735 PF13737 Transposase DDE domain FE240_14745 PF00816 H-NS histone family FE240_14765 PF13356 Arm DNA-binding domain FE240_14765 PF14659 Phage integrase, N-terminal SAM-like domain FE240_14765 PF00589 Phage integrase family FE240_14770 PF00488 MutS domain V FE240_14770 PF05188 MutS domain II FE240_14770 PF05190 MutS family domain IV FE240_14770 PF05192 MutS domain III FE240_14770 PF01624 MutS domain I FE240_14775 PF02028 BCCT, betaine/carnitine/choline family transporter FE240_14790 PF04222 Protein of unknown function (DUF416) FE240_14795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE240_14800 PF01523 Putative modulator of DNA gyrase FE240_14805 PF00795 Carbon-nitrogen hydrolase FE240_14815 PF13502 AsmA-like C-terminal region FE240_14815 PF13116 Protein of unknown function FE240_14820 PF00575 S1 RNA binding domain FE240_14820 PF10150 Ribonuclease E/G family FE240_14825 PF02545 Maf-like protein FE240_14830 PF04093 rod shape-determining protein MreD FE240_14835 PF04085 rod shape-determining protein MreC FE240_14865 PF07963 Prokaryotic N-terminal methylation motif FE240_14865 PF08334 Type II secretion system (T2SS), protein G FE240_14870 PF07963 Prokaryotic N-terminal methylation motif FE240_14875 PF07963 Prokaryotic N-terminal methylation motif FE240_14885 PF00482 Type II secretion system (T2SS), protein F FE240_14890 PF00437 Type II/IV secretion system protein FE240_14890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FE240_14900 PF13401 AAA domain FE240_14900 PF01471 Putative peptidoglycan binding domain FE240_14905 PF00263 Bacterial type II and III secretion system protein FE240_14905 PF03958 Bacterial type II/III secretion system short domain FE240_14940 PF01476 LysM domain FE240_14940 PF01464 Transglycosylase SLT domain FE240_14950 PF13677 Membrane MotB of proton-channel complex MotA/MotB FE240_14950 PF00691 OmpA family FE240_14955 PF01618 MotA/TolQ/ExbB proton channel family FE240_14960 PF04542 Sigma-70 region 2 FE240_14960 PF04545 Sigma-70, region 4 FE240_14985 PF00669 Bacterial flagellin N-terminal helical region FE240_14990 PF00460 Flagella basal body rod protein FE240_14990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_15000 PF02119 Flagellar P-ring protein FE240_15005 PF02107 Flagellar L-ring protein FE240_15010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_15010 PF00460 Flagella basal body rod protein FE240_15015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_15015 PF00460 Flagella basal body rod protein FE240_15020 PF00460 Flagella basal body rod protein FE240_15020 PF07559 Flagellar basal body protein FlaE FE240_15020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_15025 PF03963 Flagellar hook capping protein - N-terminal region FE240_15025 PF13860 FlgD Ig-like domain FE240_15025 PF13861 FlgD Tudor-like domain FE240_15030 PF00460 Flagella basal body rod protein FE240_15030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE240_15035 PF00460 Flagella basal body rod protein FE240_15070 PF01706 FliG C-terminal domain FE240_15070 PF14841 FliG middle domain FE240_15070 PF14842 FliG N-terminal domain FE240_15090 PF02049 Flagellar hook-basal body complex protein FliE FE240_15095 PF02954 Bacterial regulatory protein, Fis family FE240_15095 PF00158 Sigma-54 interaction domain FE240_15095 PF00072 Response regulator receiver domain FE240_15105 PF01312 FlhB HrpN YscU SpaS Family FE240_15110 PF01311 Bacterial export proteins, family 1 FE240_15115 PF01313 Bacterial export proteins, family 3 FE240_15120 PF00813 FliP family FE240_15125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FE240_15135 PF00005 ABC transporter FE240_15140 PF00005 ABC transporter FE240_15145 PF00528 Binding-protein-dependent transport system inner membrane component FE240_15145 PF12911 N-terminal TM domain of oligopeptide transport permease C FE240_15150 PF00528 Binding-protein-dependent transport system inner membrane component FE240_15160 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE FE240_15165 PF01750 Hydrogenase maturation protease FE240_15170 PF00374 Nickel-dependent hydrogenase FE240_15175 PF03916 Polysulphide reductase, NrfD FE240_15180 PF13247 4Fe-4S dicluster domain FE240_15185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE240_15185 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FE240_15190 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE240_15195 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FE240_15200 PF02769 AIR synthase related protein, C-terminal domain FE240_15200 PF00586 AIR synthase related protein, N-terminal domain FE240_15205 PF01924 Hydrogenase formation hypA family FE240_15210 PF01455 HupF/HypC family FE240_15215 PF01300 Telomere recombination FE240_15215 PF17788 HypF Kae1-like domain FE240_15215 PF00708 Acylphosphatase FE240_15215 PF07503 HypF finger FE240_15220 PF01380 SIS domain FE240_15225 PF08220 DeoR-like helix-turn-helix domain FE240_15225 PF00455 DeoR C terminal sensor domain FE240_15230 PF00990 Diguanylate cyclase, GGDEF domain FE240_15235 PF08335 GlnD PII-uridylyltransferase FE240_15235 PF03710 Glutamate-ammonia ligase adenylyltransferase FE240_15245 PF12729 Four helix bundle sensory module for signal transduction FE240_15245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_15245 PF00672 HAMP domain FE240_15250 PF08239 Bacterial SH3 domain FE240_15255 PF00171 Aldehyde dehydrogenase family FE240_15255 PF01619 Proline dehydrogenase FE240_15255 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FE240_15255 PF14850 DNA-binding domain of Proline dehydrogenase FE240_15260 PF00814 Glycoprotease family FE240_15265 PF01165 Ribosomal protein S21 FE240_15270 PF09424 Yqey-like protein FE240_15275 PF01807 CHC2 zinc finger FE240_15275 PF08278 DNA primase DnaG DnaB-binding FE240_15275 PF08275 DNA primase catalytic core, N-terminal domain FE240_15275 PF10410 DnaB-helicase binding domain of primase FE240_15280 PF04539 Sigma-70 region 3 FE240_15280 PF04542 Sigma-70 region 2 FE240_15280 PF04546 Sigma-70, non-essential region FE240_15280 PF04545 Sigma-70, region 4 FE240_15280 PF00140 Sigma-70 factor, region 1.2 FE240_15280 PF03979 Sigma-70 factor, region 1.1 FE240_15290 PF00141 Peroxidase FE240_15295 PF02578 Multi-copper polyphenol oxidoreductase laccase FE240_15300 PF00004 ATPase family associated with various cellular activities (AAA) FE240_15300 PF07724 AAA domain (Cdc48 subfamily) FE240_15300 PF17871 AAA lid domain FE240_15300 PF02861 Clp amino terminal domain, pathogenicity island component FE240_15300 PF10431 C-terminal, D2-small domain, of ClpB protein FE240_15305 PF03590 Aspartate-ammonia ligase FE240_15310 PF01037 Lrp/AsnC ligand binding domain FE240_15320 PF02233 NAD(P) transhydrogenase beta subunit FE240_15325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FE240_15325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FE240_15325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FE240_15330 PF00465 Iron-containing alcohol dehydrogenase FE240_15335 PF12833 Helix-turn-helix domain FE240_15335 PF06719 AraC-type transcriptional regulator N-terminus FE240_15350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FE240_15350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FE240_15355 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FE240_15355 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FE240_15360 PF01316 Arginine repressor, DNA binding domain FE240_15360 PF02863 Arginine repressor, C-terminal domain FE240_15380 PF01569 PAP2 superfamily FE240_15385 PF01594 AI-2E family transporter FE240_15390 PF05524 PEP-utilising enzyme, N-terminal FE240_15390 PF00381 PTS HPr component phosphorylation site FE240_15390 PF00391 PEP-utilising enzyme, mobile domain FE240_15390 PF03610 PTS system fructose IIA component FE240_15395 PF02734 DAK2 domain FE240_15400 PF02733 Dak1 domain FE240_15405 PF00860 Permease family FE240_15425 PF06062 Uncharacterised protein family (UPF0231) FE240_15430 PF02595 Glycerate kinase family FE240_15440 PF00255 Glutathione peroxidase FE240_15445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_15445 PF03466 LysR substrate binding domain FE240_15450 PF01773 Na+ dependent nucleoside transporter N-terminus FE240_15450 PF07662 Na+ dependent nucleoside transporter C-terminus FE240_15450 PF07670 Nucleoside recognition FE240_15455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FE240_15455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FE240_15465 PF04363 Protein of unknown function (DUF496) FE240_15505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE240_15520 PF13700 Domain of unknown function (DUF4158) FE240_15520 PF01526 Tn3 transposase DDE domain FE240_15525 PF00239 Resolvase, N terminal domain FE240_15525 PF02796 Helix-turn-helix domain of resolvase FE240_15530 PF01636 Phosphotransferase enzyme family FE240_15535 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FE240_15540 PF13495 Phage integrase, N-terminal SAM-like domain FE240_15540 PF00589 Phage integrase family FE240_15545 PF13599 Pentapeptide repeats (9 copies) FE240_15560 PF07690 Major Facilitator Superfamily FE240_15565 PF00905 Penicillin binding protein transpeptidase domain FE240_15575 PF13427 Domain of unknown function (DUF4111) FE240_15575 PF01909 Nucleotidyltransferase domain FE240_15580 PF00186 Dihydrofolate reductase FE240_15595 PF13610 DDE domain FE240_15610 PF12848 ABC transporter FE240_15610 PF00005 ABC transporter FE240_15625 PF13610 DDE domain FE240_15640 PF13610 DDE domain FE240_15650 PF02796 Helix-turn-helix domain of resolvase FE240_15650 PF00239 Resolvase, N terminal domain FE240_15670 PF07690 Major Facilitator Superfamily FE240_15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_15675 PF03466 LysR substrate binding domain FE240_15685 PF07690 Major Facilitator Superfamily FE240_15690 PF02909 Tetracyclin repressor-like, C-terminal domain FE240_15690 PF00440 Bacterial regulatory proteins, tetR family FE240_15705 PF00004 ATPase family associated with various cellular activities (AAA) FE240_15705 PF07724 AAA domain (Cdc48 subfamily) FE240_15720 PF00809 Pterin binding enzyme FE240_15760 PF09722 Protein of unknown function (DUF2384) FE240_15765 PF13538 UvrD-like helicase C-terminal domain FE240_15790 PF00589 Phage integrase family FE240_15790 PF02899 Phage integrase, N-terminal SAM-like domain FE240_15795 PF00436 Single-strand binding protein family FE240_15800 PF00403 Heavy-metal-associated domain FE240_15805 PF02219 Methylenetetrahydrofolate reductase FE240_15820 PF00672 HAMP domain FE240_15820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_15820 PF12729 Four helix bundle sensory module for signal transduction FE240_15830 PF01040 UbiA prenyltransferase family FE240_15835 PF00425 chorismate binding enzyme FE240_15840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE240_15840 PF16582 Middle domain of thiamine pyrophosphate FE240_15840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE240_15845 PF12697 Alpha/beta hydrolase family FE240_15850 PF00378 Enoyl-CoA hydratase/isomerase FE240_15855 PF13378 Enolase C-terminal domain-like FE240_15860 PF00501 AMP-binding enzyme FE240_15860 PF13193 AMP-binding enzyme C-terminal domain FE240_15865 PF02698 DUF218 domain FE240_15880 PF03922 OmpW family FE240_15885 PF17158 Membrane-associated sensor, integral membrane domain FE240_15885 PF00990 Diguanylate cyclase, GGDEF domain FE240_15890 PF00005 ABC transporter FE240_15890 PF17755 UvrA DNA-binding domain FE240_15890 PF17760 UvrA interaction domain FE240_15895 PF00196 Bacterial regulatory proteins, luxR family FE240_15900 PF03472 Autoinducer binding domain FE240_15900 PF00196 Bacterial regulatory proteins, luxR family FE240_15905 PF00765 Autoinducer synthase FE240_15910 PF01638 HxlR-like helix-turn-helix FE240_15950 PF02401 LytB protein FE240_15955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE240_15960 PF01252 Signal peptidase (SPase) II FE240_15965 PF08264 Anticodon-binding domain of tRNA FE240_15965 PF00133 tRNA synthetases class I (I, L, M and V) FE240_15965 PF06827 Zinc finger found in FPG and IleRS FE240_15970 PF06574 FAD synthetase FE240_15970 PF01687 Riboflavin kinase FE240_15975 PF03023 Lipid II flippase MurJ FE240_15980 PF01649 Ribosomal protein S20 FE240_15985 PF01022 Bacterial regulatory protein, arsR family FE240_15990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_15990 PF03466 LysR substrate binding domain FE240_15995 PF06965 Na+/H+ antiporter 1 FE240_16000 PF00303 Thymidylate synthase FE240_16005 PF01790 Prolipoprotein diacylglyceryl transferase FE240_16010 PF00391 PEP-utilising enzyme, mobile domain FE240_16010 PF05524 PEP-utilising enzyme, N-terminal FE240_16010 PF02896 PEP-utilising enzyme, TIM barrel domain FE240_16010 PF01590 GAF domain FE240_16015 PF00293 NUDIX domain FE240_16020 PF02976 DNA mismatch repair enzyme MutH FE240_16030 PF01245 Ribosomal protein L19 FE240_16035 PF01746 tRNA (Guanine-1)-methyltransferase FE240_16040 PF01782 RimM N-terminal domain FE240_16040 PF05239 PRC-barrel domain FE240_16045 PF00886 Ribosomal protein S16 FE240_16050 PF02881 SRP54-type protein, helical bundle domain FE240_16050 PF02978 Signal peptide binding domain FE240_16050 PF00448 SRP54-type protein, GTPase domain FE240_16055 PF01578 Cytochrome C assembly protein FE240_16060 PF01595 Cyclin M transmembrane N-terminal domain FE240_16060 PF03471 Transporter associated domain FE240_16060 PF00571 CBS domain FE240_16065 PF02082 Transcriptional regulator FE240_16070 PF00970 Oxidoreductase FAD-binding domain FE240_16070 PF00175 Oxidoreductase NAD-binding domain FE240_16070 PF00042 Globin FE240_16075 PF08238 Sel1 repeat FE240_16080 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FE240_16080 PF00056 lactate/malate dehydrogenase, NAD binding domain FE240_16085 PF00528 Binding-protein-dependent transport system inner membrane component FE240_16090 PF00528 Binding-protein-dependent transport system inner membrane component FE240_16095 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_16100 PF00005 ABC transporter FE240_16105 PF02863 Arginine repressor, C-terminal domain FE240_16105 PF01316 Arginine repressor, DNA binding domain FE240_16110 PF04261 Dyp-type peroxidase family FE240_16115 PF08402 TOBE domain FE240_16115 PF00005 ABC transporter FE240_16125 PF13416 Bacterial extracellular solute-binding protein FE240_16130 PF00543 Nitrogen regulatory protein P-II FE240_16135 PF00472 RF-1 domain FE240_16150 PF06406 StbA protein FE240_16155 PF11852 Domain of unknown function (DUF3372) FE240_16155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FE240_16155 PF03714 Bacterial pullanase-associated domain FE240_16155 PF18494 Pullulanase Ins domain FE240_16155 PF17967 Pullulanase N2 domain FE240_16170 PF02583 Metal-sensitive transcriptional repressor FE240_16175 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FE240_16180 PF01270 Glycosyl hydrolases family 8 FE240_16185 PF03170 Bacterial cellulose synthase subunit FE240_16190 PF00535 Glycosyl transferase family 2 FE240_16190 PF03552 Cellulose synthase FE240_16190 PF07238 PilZ domain FE240_16195 PF06564 Cellulose biosynthesis protein BcsQ FE240_16205 PF11658 Cellulose biosynthesis protein BcsG FE240_16210 PF00155 Aminotransferase class I and II FE240_16220 PF12729 Four helix bundle sensory module for signal transduction FE240_16220 PF00672 HAMP domain FE240_16220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_16230 PF00486 Transcriptional regulatory protein, C terminal FE240_16230 PF00072 Response regulator receiver domain FE240_16235 PF00512 His Kinase A (phospho-acceptor) domain FE240_16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_16235 PF00672 HAMP domain FE240_16250 PF02903 Alpha amylase, N-terminal ig-like domain FE240_16250 PF00128 Alpha amylase, catalytic domain FE240_16250 PF16657 Maltogenic Amylase, C-terminal domain FE240_16260 PF01037 Lrp/AsnC ligand binding domain FE240_16275 PF03264 NapC/NirT cytochrome c family, N-terminal region FE240_16280 PF01568 Molydopterin dinucleotide binding domain FE240_16280 PF18364 Molybdopterin oxidoreductase N-terminal domain FE240_16280 PF00384 Molybdopterin oxidoreductase FE240_16290 PF07715 TonB-dependent Receptor Plug Domain FE240_16290 PF00593 TonB dependent receptor FE240_16300 PF00392 Bacterial regulatory proteins, gntR family FE240_16305 PF01321 Creatinase/Prolidase N-terminal domain FE240_16305 PF00557 Metallopeptidase family M24 FE240_16315 PF05433 Glycine zipper 2TM domain FE240_16330 PF00962 Adenosine/AMP deaminase FE240_16335 PF07715 TonB-dependent Receptor Plug Domain FE240_16335 PF00593 TonB dependent receptor FE240_16345 PF05525 Branched-chain amino acid transport protein FE240_16350 PF00270 DEAD/DEAH box helicase FE240_16350 PF00271 Helicase conserved C-terminal domain FE240_16360 PF01844 HNH endonuclease FE240_16365 PF18030 RimK PreATP-grasp domain FE240_16365 PF08443 RimK-like ATP-grasp domain FE240_16370 PF02574 Homocysteine S-methyltransferase FE240_16370 PF02965 Vitamin B12 dependent methionine synthase, activation domain FE240_16370 PF00809 Pterin binding enzyme FE240_16370 PF02310 B12 binding domain FE240_16370 PF02607 B12 binding domain FE240_16375 PF00999 Sodium/hydrogen exchanger family FE240_16380 PF00459 Inositol monophosphatase family FE240_16385 PF00293 NUDIX domain FE240_16395 PF13419 Haloacid dehalogenase-like hydrolase FE240_16400 PF00579 tRNA synthetases class I (W and Y) FE240_16400 PF01479 S4 domain FE240_16405 PF00196 Bacterial regulatory proteins, luxR family FE240_16420 PF06969 HemN C-terminal domain FE240_16420 PF04055 Radical SAM superfamily FE240_16425 PF10675 Protein of unknown function (DUF2489) FE240_16430 PF04220 Der GTPase activator (YihI) FE240_16440 PF08501 Shikimate dehydrogenase substrate binding domain FE240_16440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FE240_16440 PF01488 Shikimate / quinate 5-dehydrogenase FE240_16445 PF01218 Coproporphyrinogen III oxidase FE240_16450 PF01300 Telomere recombination FE240_16455 PF01396 Topoisomerase DNA binding C4 zinc finger FE240_16460 PF04361 Protein of unknown function (DUF494) FE240_16465 PF02481 DNA recombination-mediator protein A FE240_16465 PF17782 DprA winged helix domain FE240_16475 PF01327 Polypeptide deformylase FE240_16480 PF00551 Formyl transferase FE240_16480 PF02911 Formyl transferase, C-terminal domain FE240_16485 PF01189 16S rRNA methyltransferase RsmB/F FE240_16485 PF01029 NusB family FE240_16490 PF02254 TrkA-N domain FE240_16490 PF02080 TrkA-C domain FE240_16495 PF02386 Cation transport protein FE240_16500 PF02646 RmuC family FE240_16515 PF02082 Transcriptional regulator FE240_16520 PF00294 pfkB family carbohydrate kinase FE240_16525 PF03466 LysR substrate binding domain FE240_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_16530 PF00117 Glutamine amidotransferase class-I FE240_16530 PF00958 GMP synthase C terminal domain FE240_16530 PF02540 NAD synthase FE240_16535 PF00202 Aminotransferase class-III FE240_16540 PF01050 Mannose-6-phosphate isomerase FE240_16540 PF00483 Nucleotidyl transferase FE240_16545 PF00171 Aldehyde dehydrogenase family FE240_16560 PF00892 EamA-like transporter family FE240_16565 PF12833 Helix-turn-helix domain FE240_16565 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FE240_16570 PF01810 LysE type translocator FE240_16585 PF14001 YdfZ protein FE240_16595 PF02801 Beta-ketoacyl synthase, C-terminal domain FE240_16595 PF00109 Beta-ketoacyl synthase, N-terminal domain FE240_16600 PF13361 UvrD-like helicase C-terminal domain FE240_16600 PF00580 UvrD/REP helicase N-terminal domain FE240_16615 PF00005 ABC transporter FE240_16620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_16630 PF03466 LysR substrate binding domain FE240_16635 PF00107 Zinc-binding dehydrogenase FE240_16635 PF08240 Alcohol dehydrogenase GroES-like domain FE240_16640 PF00756 Putative esterase FE240_16650 PF08206 Ribonuclease B OB domain FE240_16650 PF17876 Cold shock domain FE240_16650 PF00773 RNB domain FE240_16660 PF03485 Arginyl tRNA synthetase N terminal domain FE240_16660 PF05746 DALR anticodon binding domain FE240_16660 PF00750 tRNA synthetases class I (R) FE240_16670 PF00227 Proteasome subunit FE240_16675 PF00004 ATPase family associated with various cellular activities (AAA) FE240_16675 PF10431 C-terminal, D2-small domain, of ClpB protein FE240_16675 PF07724 AAA domain (Cdc48 subfamily) FE240_16680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FE240_16680 PF04324 BFD-like [2Fe-2S] binding domain FE240_16680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FE240_16680 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_16680 PF18267 Rubredoxin NAD+ reductase C-terminal domain FE240_16685 PF13806 Rieske-like [2Fe-2S] domain FE240_16690 PF01226 Formate/nitrite transporter FE240_16695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FE240_16695 PF14824 Sirohaem biosynthesis protein central FE240_16695 PF10414 Sirohaem synthase dimerisation region FE240_16700 PF03448 MgtE intracellular N domain FE240_16700 PF01769 Divalent cation transporter FE240_16700 PF00571 CBS domain FE240_16705 PF00535 Glycosyl transferase family 2 FE240_16705 PF02709 N-terminal domain of galactosyltransferase FE240_16715 PF00534 Glycosyl transferases group 1 FE240_16720 PF01370 NAD dependent epimerase/dehydratase family FE240_16725 PF13439 Glycosyltransferase Family 4 FE240_16725 PF00534 Glycosyl transferases group 1 FE240_16735 PF08359 YsiA-like protein, C-terminal region FE240_16735 PF00440 Bacterial regulatory proteins, tetR family FE240_16740 PF00155 Aminotransferase class I and II FE240_16745 PF08240 Alcohol dehydrogenase GroES-like domain FE240_16745 PF00107 Zinc-binding dehydrogenase FE240_16750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_16750 PF00672 HAMP domain FE240_16755 PF02653 Branched-chain amino acid transport system / permease component FE240_16760 PF00005 ABC transporter FE240_16765 PF13407 Periplasmic binding protein domain FE240_16770 PF16363 GDP-mannose 4,6 dehydratase FE240_16775 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FE240_16775 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FE240_16780 PF00288 GHMP kinases N terminal domain FE240_16780 PF10509 Galactokinase galactose-binding signature FE240_16780 PF08544 GHMP kinases C terminal FE240_16785 PF01263 Aldose 1-epimerase FE240_16790 PF02673 Bacitracin resistance protein BacA FE240_16820 PF00440 Bacterial regulatory proteins, tetR family FE240_16825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_16830 PF00873 AcrB/AcrD/AcrF family FE240_16835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE240_16840 PF00563 EAL domain FE240_16840 PF00360 Phytochrome region FE240_16840 PF00990 Diguanylate cyclase, GGDEF domain FE240_16840 PF01590 GAF domain FE240_16845 PF13361 UvrD-like helicase C-terminal domain FE240_16845 PF00580 UvrD/REP helicase N-terminal domain FE240_16850 PF00266 Aminotransferase class-V FE240_16855 PF02657 Fe-S metabolism associated domain FE240_16865 PF00899 ThiF family FE240_16870 PF00884 Sulfatase FE240_16875 PF02378 Phosphotransferase system, EIIC FE240_16880 PF00990 Diguanylate cyclase, GGDEF domain FE240_16885 PF03471 Transporter associated domain FE240_16885 PF02080 TrkA-C domain FE240_16885 PF00999 Sodium/hydrogen exchanger family FE240_16890 PF00684 DnaJ central domain FE240_16890 PF00226 DnaJ domain FE240_16890 PF01556 DnaJ C terminal domain FE240_16905 PF01544 CorA-like Mg2+ transporter protein FE240_16910 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FE240_16920 PF03737 Aldolase/RraA FE240_16925 PF03692 Putative zinc- or iron-chelating domain FE240_16930 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FE240_16935 PF13609 Gram-negative porin FE240_16940 PF00484 Carbonic anhydrase FE240_16945 PF00140 Sigma-70 factor, region 1.2 FE240_16945 PF04542 Sigma-70 region 2 FE240_16945 PF04545 Sigma-70, region 4 FE240_16950 PF18075 FtsX extracellular domain FE240_16955 PF00005 ABC transporter FE240_16960 PF02881 SRP54-type protein, helical bundle domain FE240_16960 PF00448 SRP54-type protein, GTPase domain FE240_16975 PF07226 Protein of unknown function (DUF1422) FE240_16980 PF00440 Bacterial regulatory proteins, tetR family FE240_16985 PF13091 PLD-like domain FE240_16990 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_16990 PF01464 Transglycosylase SLT domain FE240_17000 PF02416 mttA/Hcf106 family FE240_17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_17005 PF03466 LysR substrate binding domain FE240_17010 PF01914 MarC family integral membrane protein FE240_17015 PF10678 Protein of unknown function (DUF2492) FE240_17020 PF00375 Sodium:dicarboxylate symporter family FE240_17030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_17030 PF03466 LysR substrate binding domain FE240_17035 PF13533 Biotin-lipoyl like FE240_17040 PF07690 Major Facilitator Superfamily FE240_17055 PF01196 Ribosomal protein L17 FE240_17060 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FE240_17060 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FE240_17060 PF01000 RNA polymerase Rpb3/RpoA insert domain FE240_17065 PF01479 S4 domain FE240_17065 PF00163 Ribosomal protein S4/S9 N-terminal domain FE240_17070 PF00411 Ribosomal protein S11 FE240_17075 PF00416 Ribosomal protein S13/S18 FE240_17080 PF00444 Ribosomal protein L36 FE240_17085 PF00344 SecY translocase FE240_17090 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FE240_17095 PF00327 Ribosomal protein L30p/L7e FE240_17100 PF00333 Ribosomal protein S5, N-terminal domain FE240_17100 PF03719 Ribosomal protein S5, C-terminal domain FE240_17105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FE240_17110 PF00347 Ribosomal protein L6 FE240_17115 PF00410 Ribosomal protein S8 FE240_17120 PF00253 Ribosomal protein S14p/S29e FE240_17125 PF00673 ribosomal L5P family C-terminus FE240_17125 PF00281 Ribosomal protein L5 FE240_17130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FE240_17135 PF00238 Ribosomal protein L14p/L23e FE240_17140 PF00366 Ribosomal protein S17 FE240_17145 PF00831 Ribosomal L29 protein FE240_17150 PF00252 Ribosomal protein L16p/L10e FE240_17155 PF07650 KH domain FE240_17155 PF00189 Ribosomal protein S3, C-terminal domain FE240_17160 PF00237 Ribosomal protein L22p/L17e FE240_17165 PF00203 Ribosomal protein S19 FE240_17170 PF00181 Ribosomal Proteins L2, RNA binding domain FE240_17170 PF03947 Ribosomal Proteins L2, C-terminal domain FE240_17175 PF00276 Ribosomal protein L23 FE240_17180 PF00573 Ribosomal protein L4/L1 family FE240_17185 PF00297 Ribosomal protein L3 FE240_17190 PF00338 Ribosomal protein S10p/S20e FE240_17200 PF18081 Fanconi anemia-associated nuclease SAP domain FE240_17200 PF08774 VRR-NUC domain FE240_17210 PF14698 Argininosuccinate lyase C-terminal FE240_17210 PF00206 Lyase FE240_17215 PF00764 Arginosuccinate synthase FE240_17220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FE240_17220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FE240_17225 PF00696 Amino acid kinase family FE240_17230 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE240_17230 PF02774 Semialdehyde dehydrogenase, dimerisation domain FE240_17235 PF01546 Peptidase family M20/M25/M40 FE240_17235 PF07687 Peptidase dimerisation domain FE240_17240 PF00311 Phosphoenolpyruvate carboxylase FE240_17250 PF04073 Aminoacyl-tRNA editing domain FE240_17265 PF00155 Aminotransferase class I and II FE240_17265 PF00392 Bacterial regulatory proteins, gntR family FE240_17270 PF03788 LrgA family FE240_17275 PF04172 LrgB-like family FE240_17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_17285 PF03466 LysR substrate binding domain FE240_17290 PF03447 Homoserine dehydrogenase, NAD binding domain FE240_17290 PF00696 Amino acid kinase family FE240_17290 PF00742 Homoserine dehydrogenase FE240_17295 PF01053 Cys/Met metabolism PLP-dependent enzyme FE240_17300 PF01340 Met Apo-repressor, MetJ FE240_17305 PF03222 Tryptophan/tyrosine permease family FE240_17315 PF16868 NMT1-like family FE240_17320 PF00691 OmpA family FE240_17320 PF13488 Glycine zipper FE240_17325 PF02743 Cache domain FE240_17325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE240_17325 PF00672 HAMP domain FE240_17330 PF03352 Methyladenine glycosylase FE240_17335 PF02091 Glycyl-tRNA synthetase alpha subunit FE240_17340 PF05746 DALR anticodon binding domain FE240_17340 PF02092 Glycyl-tRNA synthetase beta subunit FE240_17345 PF13737 Transposase DDE domain FE240_17350 PF01389 OmpA-like transmembrane domain FE240_17350 PF00691 OmpA family FE240_17355 PF03222 Tryptophan/tyrosine permease family FE240_17360 PF12801 4Fe-4S binding domain FE240_17365 PF12697 Alpha/beta hydrolase family FE240_17365 PF08241 Methyltransferase domain FE240_17375 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_17375 PF18113 Rubredoxin binding C-terminal domain FE240_17380 PF00753 Metallo-beta-lactamase superfamily FE240_17380 PF00258 Flavodoxin FE240_17380 PF00301 Rubredoxin FE240_17385 PF01590 GAF domain FE240_17385 PF00158 Sigma-54 interaction domain FE240_17390 PF05958 tRNA (Uracil-5-)-methyltransferase FE240_17405 PF00356 Bacterial regulatory proteins, lacI family FE240_17410 PF13458 Periplasmic binding protein FE240_17415 PF02653 Branched-chain amino acid transport system / permease component FE240_17420 PF11862 Domain of unknown function (DUF3382) FE240_17420 PF02653 Branched-chain amino acid transport system / permease component FE240_17425 PF00005 ABC transporter FE240_17425 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE240_17430 PF00005 ABC transporter FE240_17435 PF12833 Helix-turn-helix domain FE240_17445 PF00581 Rhodanese-like domain FE240_17450 PF01694 Rhomboid family FE240_17450 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FE240_17455 PF01040 UbiA prenyltransferase family FE240_17465 PF03748 Flagellar basal body-associated protein FliL FE240_17480 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FE240_17485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FE240_17490 PF13607 Succinyl-CoA ligase like flavodoxin domain FE240_17490 PF13380 CoA binding domain FE240_17490 PF00583 Acetyltransferase (GNAT) family FE240_17520 PF03544 Gram-negative bacterial TonB protein C-terminal FE240_17525 PF02472 Biopolymer transport protein ExbD/TolR FE240_17530 PF01618 MotA/TolQ/ExbB proton channel family FE240_17535 PF01618 MotA/TolQ/ExbB proton channel family FE240_17545 PF00196 Bacterial regulatory proteins, luxR family FE240_17545 PF03472 Autoinducer binding domain FE240_17600 PF02669 K+-transporting ATPase, c chain FE240_17605 PF13493 Domain of unknown function (DUF4118) FE240_17605 PF13492 GAF domain FE240_17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_17605 PF00512 His Kinase A (phospho-acceptor) domain FE240_17605 PF02702 Osmosensitive K+ channel His kinase sensor domain FE240_17610 PF00486 Transcriptional regulatory protein, C terminal FE240_17610 PF00072 Response regulator receiver domain FE240_17620 PF00155 Aminotransferase class I and II FE240_17625 PF00011 Hsp20/alpha crystallin family FE240_17630 PF00011 Hsp20/alpha crystallin family FE240_17635 PF18053 DNA gyrase B subunit insert domain FE240_17635 PF01751 Toprim domain FE240_17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_17635 PF00986 DNA gyrase B subunit, carboxyl terminus FE240_17635 PF00204 DNA gyrase B FE240_17640 PF02463 RecF/RecN/SMC N terminal domain FE240_17645 PF02768 DNA polymerase III beta subunit, C-terminal domain FE240_17645 PF02767 DNA polymerase III beta subunit, central domain FE240_17645 PF00712 DNA polymerase III beta subunit, N-terminal domain FE240_17650 PF00308 Bacterial dnaA protein FE240_17650 PF08299 Bacterial dnaA protein helix-turn-helix FE240_17650 PF11638 DnaA N-terminal domain FE240_17655 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE240_17660 PF00528 Binding-protein-dependent transport system inner membrane component FE240_17665 PF00005 ABC transporter FE240_17670 PF00468 Ribosomal protein L34 FE240_17675 PF00825 Ribonuclease P FE240_17680 PF01809 Putative membrane protein insertion efficiency factor FE240_17685 PF02096 60Kd inner membrane protein FE240_17685 PF14849 YidC periplasmic domain FE240_17690 PF12631 MnmE helical domain FE240_17690 PF01926 50S ribosome-binding GTPase FE240_17690 PF10396 GTP-binding protein TrmE N-terminus FE240_17695 PF02899 Phage integrase, N-terminal SAM-like domain FE240_17695 PF00589 Phage integrase family FE240_17720 PF02384 N-6 DNA Methylase FE240_17720 PF12161 HsdM N-terminal domain FE240_17730 PF02810 SEC-C motif FE240_17730 PF03695 Uncharacterised protein family (UPF0149) FE240_17735 PF00270 DEAD/DEAH box helicase FE240_17735 PF17191 RecG wedge domain FE240_17735 PF13749 Putative ATP-dependent DNA helicase recG C-terminal FE240_17740 PF11867 Domain of unknown function (DUF3387) FE240_17740 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FE240_17740 PF18766 SWI2/SNF2 ATPase FE240_17775 PF13657 HipA N-terminal domain FE240_17775 PF07804 HipA-like C-terminal domain FE240_17780 PF01032 FecCD transport family FE240_17785 PF01497 Periplasmic binding protein FE240_17790 PF00005 ABC transporter FE240_17795 PF00005 ABC transporter FE240_17800 PF00593 TonB dependent receptor FE240_17800 PF07715 TonB-dependent Receptor Plug Domain FE240_17805 PF00258 Flavodoxin FE240_17810 PF13932 GidA associated domain FE240_17810 PF01134 Glucose inhibited division protein A FE240_17815 PF02527 rRNA small subunit methyltransferase G FE240_17820 PF13614 AAA domain FE240_17825 PF17762 HTH domain found in ParB protein FE240_17825 PF02195 ParB-like nuclease domain FE240_17835 PF00119 ATP synthase A chain FE240_17840 PF00137 ATP synthase subunit C FE240_17845 PF00430 ATP synthase B/B' CF(0) FE240_17850 PF00213 ATP synthase delta (OSCP) subunit FE240_17855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE240_17855 PF00306 ATP synthase alpha/beta chain, C terminal domain FE240_17855 PF02874 ATP synthase alpha/beta family, beta-barrel domain FE240_17860 PF00231 ATP synthase FE240_17865 PF02874 ATP synthase alpha/beta family, beta-barrel domain FE240_17865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE240_17870 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FE240_17870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FE240_17875 PF14602 Hexapeptide repeat of succinyl-transferase FE240_17875 PF00132 Bacterial transferase hexapeptide (six repeats) FE240_17875 PF12804 MobA-like NTP transferase domain FE240_17880 PF00905 Penicillin binding protein transpeptidase domain FE240_17885 PF03466 LysR substrate binding domain FE240_17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_17890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE240_17910 PF07042 TrfA protein FE240_17940 PF02463 RecF/RecN/SMC N terminal domain FE240_17940 PF06470 SMC proteins Flexible Hinge Domain FE240_18000 PF00270 DEAD/DEAH box helicase FE240_18000 PF00271 Helicase conserved C-terminal domain FE240_18000 PF08148 DSHCT (NUC185) domain FE240_18010 PF01381 Helix-turn-helix FE240_18015 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB FE240_18025 PF08340 Domain of unknown function (DUF1732) FE240_18025 PF03755 YicC-like family, N-terminal region FE240_18030 PF01138 3' exoribonuclease family, domain 1 FE240_18030 PF03725 3' exoribonuclease family, domain 2 FE240_18035 PF00156 Phosphoribosyl transferase domain FE240_18040 PF04073 Aminoacyl-tRNA editing domain FE240_18050 PF02541 Ppx/GppA phosphatase family FE240_18055 PF00271 Helicase conserved C-terminal domain FE240_18055 PF00270 DEAD/DEAH box helicase FE240_18060 PF00085 Thioredoxin FE240_18065 PF07498 Rho termination factor, N-terminal domain FE240_18065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE240_18065 PF07497 Rho termination factor, RNA-binding domain FE240_18075 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FE240_18080 PF00175 Oxidoreductase NAD-binding domain FE240_18085 PF00563 EAL domain FE240_18085 PF08447 PAS fold FE240_18085 PF08448 PAS fold FE240_18085 PF00990 Diguanylate cyclase, GGDEF domain FE240_18090 PF04380 Membrane fusogenic activity FE240_18095 PF12262 Bacterial virulence factor lipase N-terminal FE240_18100 PF05552 Conserved TM helix FE240_18100 PF00924 Mechanosensitive ion channel FE240_18105 PF00440 Bacterial regulatory proteins, tetR family FE240_18110 PF00692 dUTPase FE240_18115 PF04127 DNA / pantothenate metabolism flavoprotein FE240_18115 PF02441 Flavoprotein FE240_18120 PF04002 RadC-like JAB domain FE240_18125 PF00830 Ribosomal L28 family FE240_18130 PF00471 Ribosomal protein L33 FE240_18140 PF06827 Zinc finger found in FPG and IleRS FE240_18140 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FE240_18140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FE240_18145 PF04393 Protein of unknown function (DUF535) FE240_18150 PF01467 Cytidylyltransferase-like FE240_18155 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FE240_18160 PF00535 Glycosyl transferase family 2 FE240_18165 PF02903 Alpha amylase, N-terminal ig-like domain FE240_18165 PF00128 Alpha amylase, catalytic domain FE240_18175 PF03724 META domain FE240_18180 PF00012 Hsp70 protein FE240_18185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE240_18185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE240_18195 PF05981 CreA protein FE240_18210 PF01258 Prokaryotic dksA/traR C4-type zinc finger FE240_18215 PF00120 Glutamine synthetase, catalytic domain FE240_18220 PF00202 Aminotransferase class-III FE240_18225 PF13416 Bacterial extracellular solute-binding protein FE240_18230 PF13416 Bacterial extracellular solute-binding protein FE240_18235 PF00005 ABC transporter FE240_18235 PF08402 TOBE domain FE240_18240 PF00528 Binding-protein-dependent transport system inner membrane component FE240_18245 PF00528 Binding-protein-dependent transport system inner membrane component FE240_18250 PF03473 MOSC domain FE240_18250 PF03475 3-alpha domain FE240_18270 PF00999 Sodium/hydrogen exchanger family FE240_18270 PF02254 TrkA-N domain FE240_18275 PF02525 Flavodoxin-like fold FE240_18290 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FE240_18290 PF00326 Prolyl oligopeptidase family FE240_18295 PF01042 Endoribonuclease L-PSP FE240_18300 PF01206 Sulfurtransferase TusA FE240_18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE240_18315 PF03466 LysR substrate binding domain FE240_18320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FE240_18320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FE240_18325 PF13593 SBF-like CPA transporter family (DUF4137) FE240_18335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE240_18335 PF00529 HlyD membrane-fusion protein of T1SS FE240_18340 PF00873 AcrB/AcrD/AcrF family FE240_18375 PF12867 DinB superfamily FE240_18375 PF03781 Sulfatase-modifying factor enzyme 1 FE240_18385 PF00271 Helicase conserved C-terminal domain FE240_18385 PF00270 DEAD/DEAH box helicase FE240_18385 PF18074 Primosomal protein N C-terminal domain FE240_18385 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FE240_18385 PF17764 3′ DNA-binding domain (3′BD) FE240_18390 PF01197 Ribosomal protein L31 FE240_18395 PF13460 NAD(P)H-binding FE240_18395 PF11066 Protein of unknown function (DUF2867) FE240_18400 PF00390 Malic enzyme, N-terminal domain FE240_18400 PF03949 Malic enzyme, NAD binding domain FE240_18405 PF00672 HAMP domain FE240_18405 PF00512 His Kinase A (phospho-acceptor) domain FE240_18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_18410 PF00072 Response regulator receiver domain FE240_18410 PF00486 Transcriptional regulatory protein, C terminal FE240_18415 PF01547 Bacterial extracellular solute-binding protein FE240_18420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_18420 PF00512 His Kinase A (phospho-acceptor) domain FE240_18420 PF00672 HAMP domain FE240_18425 PF00072 Response regulator receiver domain FE240_18425 PF00486 Transcriptional regulatory protein, C terminal FE240_18430 PF02803 Thiolase, C-terminal domain FE240_18430 PF00108 Thiolase, N-terminal domain FE240_18435 PF00378 Enoyl-CoA hydratase/isomerase FE240_18435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE240_18435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE240_18440 PF00501 AMP-binding enzyme FE240_18440 PF13193 AMP-binding enzyme C-terminal domain FE240_18445 PF00557 Metallopeptidase family M24 FE240_18450 PF01205 Uncharacterized protein family UPF0029 FE240_18450 PF09186 Domain of unknown function (DUF1949) FE240_18455 PF02386 Cation transport protein FE240_18460 PF12724 Flavodoxin domain FE240_18500 PF00696 Amino acid kinase family FE240_18505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FE240_18505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FE240_18510 PF03606 C4-dicarboxylate anaerobic carrier FE240_18525 PF00990 Diguanylate cyclase, GGDEF domain FE240_18535 PF01131 DNA topoisomerase FE240_18535 PF01751 Toprim domain FE240_18540 PF02386 Cation transport protein FE240_18545 PF02254 TrkA-N domain FE240_18545 PF02080 TrkA-C domain FE240_18550 PF01565 FAD binding domain FE240_18550 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FE240_18555 PF08279 HTH domain FE240_18555 PF03099 Biotin/lipoate A/B protein ligase family FE240_18555 PF02237 Biotin protein ligase C terminal domain FE240_18560 PF03553 Na+/H+ antiporter family FE240_18560 PF13726 Na+-H+ antiporter family FE240_18565 PF00485 Phosphoribulokinase / Uridine kinase family FE240_18585 PF00009 Elongation factor Tu GTP binding domain FE240_18585 PF03143 Elongation factor Tu C-terminal domain FE240_18585 PF03144 Elongation factor Tu domain 2 FE240_18595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FE240_18600 PF02357 Transcription termination factor nusG FE240_18600 PF00467 KOW motif FE240_18605 PF00298 Ribosomal protein L11, RNA binding domain FE240_18605 PF03946 Ribosomal protein L11, N-terminal domain FE240_18610 PF00687 Ribosomal protein L1p/L10e family FE240_18615 PF00466 Ribosomal protein L10 FE240_18620 PF00542 Ribosomal protein L7/L12 C-terminal domain FE240_18620 PF16320 Ribosomal protein L7/L12 dimerisation domain FE240_18625 PF10385 RNA polymerase beta subunit external 1 domain FE240_18625 PF00562 RNA polymerase Rpb2, domain 6 FE240_18625 PF04560 RNA polymerase Rpb2, domain 7 FE240_18625 PF04561 RNA polymerase Rpb2, domain 2 FE240_18625 PF04563 RNA polymerase beta subunit FE240_18625 PF04565 RNA polymerase Rpb2, domain 3 FE240_18630 PF04998 RNA polymerase Rpb1, domain 5 FE240_18630 PF05000 RNA polymerase Rpb1, domain 4 FE240_18630 PF04983 RNA polymerase Rpb1, domain 3 FE240_18630 PF00623 RNA polymerase Rpb1, domain 2 FE240_18630 PF04997 RNA polymerase Rpb1, domain 1 FE240_18635 PF13309 HTH domain FE240_18635 PF08348 YheO-like PAS domain FE240_18640 PF01042 Endoribonuclease L-PSP FE240_18645 PF02635 DsrE/DsrF-like family FE240_18650 PF02635 DsrE/DsrF-like family FE240_18655 PF04077 DsrH like protein FE240_18660 PF00164 Ribosomal protein S12/S23 FE240_18665 PF00177 Ribosomal protein S7p/S5e FE240_18670 PF03764 Elongation factor G, domain IV FE240_18670 PF14492 Elongation Factor G, domain II FE240_18670 PF00679 Elongation factor G C-terminus FE240_18670 PF00009 Elongation factor Tu GTP binding domain FE240_18670 PF03144 Elongation factor Tu domain 2 FE240_18675 PF03143 Elongation factor Tu C-terminal domain FE240_18675 PF00009 Elongation factor Tu GTP binding domain FE240_18675 PF03144 Elongation factor Tu domain 2 FE240_18715 PF07969 Amidohydrolase family FE240_18720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FE240_18725 PF01209 ubiE/COQ5 methyltransferase family FE240_18730 PF02036 SCP-2 sterol transfer family FE240_18735 PF03109 ABC1 family FE240_18740 PF02416 mttA/Hcf106 family FE240_18745 PF02416 mttA/Hcf106 family FE240_18750 PF00902 Sec-independent protein translocase protein (TatC) FE240_18755 PF01026 TatD related DNase FE240_18760 PF00490 Delta-aminolevulinic acid dehydratase FE240_18805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE240_18805 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE240_18810 PF00512 His Kinase A (phospho-acceptor) domain FE240_18810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_18810 PF00672 HAMP domain FE240_18810 PF17149 Periplasmic sensor domain found in signal transduction proteins FE240_18810 PF01627 Hpt domain FE240_18810 PF00072 Response regulator receiver domain FE240_18815 PF01432 Peptidase family M3 FE240_18820 PF03707 Bacterial signalling protein N terminal repeat FE240_18820 PF00990 Diguanylate cyclase, GGDEF domain FE240_18820 PF00563 EAL domain FE240_18825 PF04445 Putative SAM-dependent methyltransferase FE240_18835 PF01553 Acyltransferase FE240_18840 PF00717 Peptidase S24-like FE240_18840 PF01726 LexA DNA binding domain FE240_18850 PF02630 SCO1/SenC FE240_18855 PF01554 MatE FE240_18860 PF00588 SpoU rRNA Methylase family FE240_18865 PF00512 His Kinase A (phospho-acceptor) domain FE240_18865 PF16527 Two-component sensor protein CpxA, periplasmic domain FE240_18865 PF00672 HAMP domain FE240_18865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE240_18870 PF00072 Response regulator receiver domain FE240_18870 PF00486 Transcriptional regulatory protein, C terminal FE240_18875 PF16916 Dimerisation domain of Zinc Transporter FE240_18875 PF01545 Cation efflux family FE240_18880 PF06426 Serine acetyltransferase, N-terminal FE240_18880 PF00132 Bacterial transferase hexapeptide (six repeats) FE240_18890 PF06005 Cell division protein ZapB FE240_18900 PF00476 DNA polymerase family A FE240_18900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FE240_18900 PF01367 5'-3' exonuclease, C-terminal SAM fold FE240_18900 PF01612 3'-5' exonuclease FE240_18905 PF00132 Bacterial transferase hexapeptide (six repeats)