locus-tag class description E5E96_00015 PF00483 Nucleotidyl transferase E5E96_00020 PF16363 GDP-mannose 4,6 dehydratase E5E96_00025 PF02321 Outer membrane efflux protein E5E96_00035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_00035 PF00529 HlyD membrane-fusion protein of T1SS E5E96_00040 PF08361 MAATS-type transcriptional repressor, C-terminal region E5E96_00040 PF00440 Bacterial regulatory proteins, tetR family E5E96_00065 PF00849 RNA pseudouridylate synthase E5E96_00065 PF01479 S4 domain E5E96_00070 PF04079 Segregation and condensation complex subunit ScpB E5E96_00075 PF02616 Segregation and condensation protein ScpA E5E96_00080 PF01300 Telomere recombination E5E96_00085 PF02811 PHP domain E5E96_00090 PF00425 chorismate binding enzyme E5E96_00090 PF04715 Anthranilate synthase component I, N terminal region E5E96_00095 PF00117 Glutamine amidotransferase class-I E5E96_00095 PF02885 Glycosyl transferase family, helical bundle domain E5E96_00095 PF00591 Glycosyl transferase family, a/b domain E5E96_00100 PF00591 Glycosyl transferase family, a/b domain E5E96_00100 PF02885 Glycosyl transferase family, helical bundle domain E5E96_00105 PF00218 Indole-3-glycerol phosphate synthase E5E96_00105 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E5E96_00110 PF00291 Pyridoxal-phosphate dependent enzyme E5E96_00115 PF00290 Tryptophan synthase alpha chain E5E96_00140 PF04307 LexA-binding, inner membrane-associated putative hydrolase E5E96_00160 PF07662 Na+ dependent nucleoside transporter C-terminus E5E96_00160 PF01773 Na+ dependent nucleoside transporter N-terminus E5E96_00160 PF07670 Nucleoside recognition E5E96_00175 PF05656 Protein of unknown function (DUF805) E5E96_00190 PF07690 Major Facilitator Superfamily E5E96_00195 PF01040 UbiA prenyltransferase family E5E96_00200 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E5E96_00205 PF00510 Cytochrome c oxidase subunit III E5E96_00210 PF00115 Cytochrome C and Quinol oxidase polypeptide I E5E96_00215 PF06481 COX Aromatic Rich Motif E5E96_00215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E5E96_00225 PF00034 Cytochrome c E5E96_00225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E5E96_00235 PF01156 Inosine-uridine preferring nucleoside hydrolase E5E96_00250 PF00127 Copper binding proteins, plastocyanin/azurin family E5E96_00255 PF02424 ApbE family E5E96_00275 PF03372 Endonuclease/Exonuclease/phosphatase family E5E96_00280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_00295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_00295 PF00529 HlyD membrane-fusion protein of T1SS E5E96_00300 PF00873 AcrB/AcrD/AcrF family E5E96_00320 PF03099 Biotin/lipoate A/B protein ligase family E5E96_00320 PF10437 Bacterial lipoate protein ligase C-terminus E5E96_00325 PF03707 Bacterial signalling protein N terminal repeat E5E96_00325 PF00563 EAL domain E5E96_00325 PF00990 Diguanylate cyclase, GGDEF domain E5E96_00345 PF04143 Sulphur transport E5E96_00350 PF01022 Bacterial regulatory protein, arsR family E5E96_00365 PF02308 MgtC family E5E96_00370 PF01556 DnaJ C terminal domain E5E96_00370 PF00226 DnaJ domain E5E96_00370 PF00684 DnaJ central domain E5E96_00375 PF00012 Hsp70 protein E5E96_00380 PF01025 GrpE E5E96_00385 PF01513 ATP-NAD kinase E5E96_00395 PF02833 DHHA2 domain E5E96_00395 PF01368 DHH family E5E96_00405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_00410 PF02687 FtsX-like permease family E5E96_00410 PF12704 MacB-like periplasmic core domain E5E96_00410 PF00005 ABC transporter E5E96_00415 PF02321 Outer membrane efflux protein E5E96_00420 PF04954 Siderophore-interacting protein E5E96_00420 PF08021 Siderophore-interacting FAD-binding domain E5E96_00425 PF00793 DAHP synthetase I family E5E96_00430 PF00816 H-NS histone family E5E96_00445 PF05656 Protein of unknown function (DUF805) E5E96_00460 PF01266 FAD dependent oxidoreductase E5E96_00465 PF01381 Helix-turn-helix E5E96_00465 PF07883 Cupin domain E5E96_00470 PF00171 Aldehyde dehydrogenase family E5E96_00475 PF00202 Aminotransferase class-III E5E96_00480 PF00324 Amino acid permease E5E96_00485 PF13520 Amino acid permease E5E96_00495 PF02690 Na+/Pi-cotransporter E5E96_00500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E5E96_00500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E5E96_00505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E5E96_00510 PF00072 Response regulator receiver domain E5E96_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_00510 PF00989 PAS fold E5E96_00510 PF00512 His Kinase A (phospho-acceptor) domain E5E96_00510 PF01627 Hpt domain E5E96_00510 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_00525 PF01048 Phosphorylase superfamily E5E96_00570 PF00291 Pyridoxal-phosphate dependent enzyme E5E96_00570 PF14821 Threonine synthase N terminus E5E96_00575 PF08544 GHMP kinases C terminal E5E96_00575 PF00288 GHMP kinases N terminal domain E5E96_00580 PF01842 ACT domain E5E96_00580 PF03447 Homoserine dehydrogenase, NAD binding domain E5E96_00580 PF13840 ACT domain E5E96_00580 PF00696 Amino acid kinase family E5E96_00580 PF00742 Homoserine dehydrogenase E5E96_00590 PF00588 SpoU rRNA Methylase family E5E96_00595 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) E5E96_00610 PF03737 Aldolase/RraA E5E96_00620 PF00486 Transcriptional regulatory protein, C terminal E5E96_00620 PF00072 Response regulator receiver domain E5E96_00635 PF00005 ABC transporter E5E96_00635 PF00664 ABC transporter transmembrane region E5E96_00640 PF00005 ABC transporter E5E96_00640 PF00664 ABC transporter transmembrane region E5E96_00660 PF18389 TrmO C-terminal domain E5E96_00660 PF01980 tRNA-methyltransferase O E5E96_00665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E5E96_00665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E5E96_00675 PF00004 ATPase family associated with various cellular activities (AAA) E5E96_00675 PF10431 C-terminal, D2-small domain, of ClpB protein E5E96_00675 PF17871 AAA lid domain E5E96_00675 PF07724 AAA domain (Cdc48 subfamily) E5E96_00675 PF02861 Clp amino terminal domain, pathogenicity island component E5E96_00680 PF00291 Pyridoxal-phosphate dependent enzyme E5E96_00685 PF00381 PTS HPr component phosphorylation site E5E96_00690 PF02896 PEP-utilising enzyme, TIM barrel domain E5E96_00690 PF05524 PEP-utilising enzyme, N-terminal E5E96_00690 PF00391 PEP-utilising enzyme, mobile domain E5E96_00695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E5E96_00700 PF00072 Response regulator receiver domain E5E96_00700 PF00990 Diguanylate cyclase, GGDEF domain E5E96_00710 PF01292 Prokaryotic cytochrome b561 E5E96_00725 PF13476 AAA domain E5E96_00730 PF00149 Calcineurin-like phosphoesterase E5E96_00730 PF12320 Type 5 capsule protein repressor C-terminal domain E5E96_00740 PF04381 Putative exonuclease, RdgC E5E96_00750 PF00999 Sodium/hydrogen exchanger family E5E96_00750 PF02254 TrkA-N domain E5E96_00755 PF04389 Peptidase family M28 E5E96_00755 PF04151 Bacterial pre-peptidase C-terminal domain E5E96_00765 PF02887 Pyruvate kinase, alpha/beta domain E5E96_00765 PF00224 Pyruvate kinase, barrel domain E5E96_00770 PF12795 Mechanosensitive ion channel porin domain E5E96_00770 PF00924 Mechanosensitive ion channel E5E96_00770 PF12794 Mechanosensitive ion channel inner membrane domain 1 E5E96_00780 PF10282 Lactonase, 7-bladed beta-propeller E5E96_00785 PF00860 Permease family E5E96_00790 PF03949 Malic enzyme, NAD binding domain E5E96_00790 PF00390 Malic enzyme, N-terminal domain E5E96_00795 PF00072 Response regulator receiver domain E5E96_00805 PF13247 4Fe-4S dicluster domain E5E96_00810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E5E96_00810 PF00384 Molybdopterin oxidoreductase E5E96_00810 PF01568 Molydopterin dinucleotide binding domain E5E96_00810 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E5E96_00810 PF12838 4Fe-4S dicluster domain E5E96_00810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E5E96_00810 PF00384 Molybdopterin oxidoreductase E5E96_00810 PF01568 Molydopterin dinucleotide binding domain E5E96_00810 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E5E96_00810 PF12838 4Fe-4S dicluster domain E5E96_00840 PF00912 Transglycosylase E5E96_00850 PF02634 FdhD/NarQ family E5E96_00855 PF12727 PBP superfamily domain E5E96_00855 PF12728 Helix-turn-helix domain E5E96_00860 PF00989 PAS fold E5E96_00860 PF00512 His Kinase A (phospho-acceptor) domain E5E96_00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_00865 PF00072 Response regulator receiver domain E5E96_00865 PF02954 Bacterial regulatory protein, Fis family E5E96_00865 PF00158 Sigma-54 interaction domain E5E96_00870 PF12849 PBP superfamily domain E5E96_00875 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_00880 PF00005 ABC transporter E5E96_00885 PF12804 MobA-like NTP transferase domain E5E96_00890 PF03453 MoeA N-terminal region (domain I and II) E5E96_00890 PF03454 MoeA C-terminal region (domain IV) E5E96_00890 PF00994 Probable molybdopterin binding domain E5E96_00895 PF04632 Fusaric acid resistance protein family E5E96_00905 PF13426 PAS domain E5E96_00905 PF08447 PAS fold E5E96_00905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_00925 PF05114 Protein of unknown function (DUF692) E5E96_00935 PF10725 Protein of unknown function (DUF2517) E5E96_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_00955 PF00512 His Kinase A (phospho-acceptor) domain E5E96_00955 PF09308 LuxQ, periplasmic E5E96_00955 PF00072 Response regulator receiver domain E5E96_00960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_00965 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_00970 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_00970 PF12911 N-terminal TM domain of oligopeptide transport permease C E5E96_00975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E5E96_00975 PF00005 ABC transporter E5E96_00980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E5E96_00980 PF00005 ABC transporter E5E96_00990 PF01869 BadF/BadG/BcrA/BcrD ATPase family E5E96_01000 PF08447 PAS fold E5E96_01000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_01015 PF08272 Topoisomerase I zinc-ribbon-like E5E96_01015 PF01131 DNA topoisomerase E5E96_01015 PF01396 Topoisomerase DNA binding C4 zinc finger E5E96_01015 PF01751 Toprim domain E5E96_01020 PF04996 Succinylarginine dihydrolase E5E96_01025 PF08496 Peptidase family S49 N-terminal E5E96_01025 PF01343 Peptidase family S49 E5E96_01030 PF00106 short chain dehydrogenase E5E96_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_01035 PF03466 LysR substrate binding domain E5E96_01040 PF07690 Major Facilitator Superfamily E5E96_01045 PF00155 Aminotransferase class I and II E5E96_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_01055 PF03466 LysR substrate binding domain E5E96_01065 PF01161 Phosphatidylethanolamine-binding protein E5E96_01075 PF01204 Trehalase E5E96_01080 PF00579 tRNA synthetases class I (W and Y) E5E96_01085 PF01551 Peptidase family M23 E5E96_01085 PF01476 LysM domain E5E96_01085 PF08525 Opacity-associated protein A N-terminal motif E5E96_01090 PF03702 Anhydro-N-acetylmuramic acid kinase E5E96_01095 PF01965 DJ-1/PfpI family E5E96_01105 PF01042 Endoribonuclease L-PSP E5E96_01115 PF00456 Transketolase, thiamine diphosphate binding domain E5E96_01115 PF02780 Transketolase, C-terminal domain E5E96_01115 PF02779 Transketolase, pyrimidine binding domain E5E96_01120 PF00438 S-adenosylmethionine synthetase, N-terminal domain E5E96_01120 PF02772 S-adenosylmethionine synthetase, central domain E5E96_01120 PF02773 S-adenosylmethionine synthetase, C-terminal domain E5E96_01125 PF17283 SprT-like zinc ribbon domain E5E96_01125 PF10263 SprT-like family E5E96_01130 PF04231 Endonuclease I E5E96_01135 PF04452 RNA methyltransferase E5E96_01140 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E5E96_01140 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E5E96_01150 PF02622 Uncharacterized ACR, COG1678 E5E96_01155 PF03652 Holliday junction resolvase E5E96_01160 PF00854 POT family E5E96_01165 PF00144 Beta-lactamase E5E96_01170 PF17863 AAA lid domain E5E96_01170 PF07726 ATPase family associated with various cellular activities (AAA) E5E96_01180 PF11992 Domain of unknown function (DUF3488) E5E96_01180 PF13559 Domain of unknown function (DUF4129) E5E96_01180 PF01841 Transglutaminase-like superfamily E5E96_01185 PF01235 Sodium:alanine symporter family E5E96_01190 PF00923 Transaldolase/Fructose-6-phosphate aldolase E5E96_01205 PF03167 Uracil DNA glycosylase superfamily E5E96_01210 PF01228 Glycine radical E5E96_01215 PF00375 Sodium:dicarboxylate symporter family E5E96_01220 PF00793 DAHP synthetase I family E5E96_01225 PF13369 Transglutaminase-like superfamily E5E96_01235 PF13847 Methyltransferase domain E5E96_01235 PF17827 PrmC N-terminal domain E5E96_01240 PF00472 RF-1 domain E5E96_01240 PF03462 PCRF domain E5E96_01245 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E5E96_01245 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E5E96_01245 PF01488 Shikimate / quinate 5-dehydrogenase E5E96_01250 PF03550 Outer membrane lipoprotein LolB E5E96_01255 PF08544 GHMP kinases C terminal E5E96_01255 PF00288 GHMP kinases N terminal domain E5E96_01265 PF14572 Phosphoribosyl synthetase-associated domain E5E96_01265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E5E96_01270 PF02872 5'-nucleotidase, C-terminal domain E5E96_01270 PF00149 Calcineurin-like phosphoesterase E5E96_01275 PF01195 Peptidyl-tRNA hydrolase E5E96_01280 PF06071 Protein of unknown function (DUF933) E5E96_01280 PF01926 50S ribosome-binding GTPase E5E96_01325 PF03600 Citrate transporter E5E96_01325 PF02080 TrkA-C domain E5E96_01330 PF04973 Nicotinamide mononucleotide transporter E5E96_01335 PF01048 Phosphorylase superfamily E5E96_01370 PF16657 Maltogenic Amylase, C-terminal domain E5E96_01370 PF00128 Alpha amylase, catalytic domain E5E96_01380 PF10371 Domain of unknown function E5E96_01380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E5E96_01380 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E5E96_01380 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E5E96_01380 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E5E96_01385 PF07690 Major Facilitator Superfamily E5E96_01390 PF13419 Haloacid dehalogenase-like hydrolase E5E96_01400 PF00171 Aldehyde dehydrogenase family E5E96_01405 PF04958 Arginine N-succinyltransferase beta subunit E5E96_01410 PF00202 Aminotransferase class-III E5E96_01415 PF00117 Glutamine amidotransferase class-I E5E96_01425 PF00579 tRNA synthetases class I (W and Y) E5E96_01430 PF13419 Haloacid dehalogenase-like hydrolase E5E96_01435 PF00834 Ribulose-phosphate 3 epimerase family E5E96_01445 PF02086 D12 class N6 adenine-specific DNA methyltransferase E5E96_01455 PF01761 3-dehydroquinate synthase E5E96_01460 PF01202 Shikimate kinase E5E96_01465 PF11741 AMIN domain E5E96_01465 PF03958 Bacterial type II/III secretion system short domain E5E96_01465 PF07660 Secretin and TonB N terminus short domain E5E96_01465 PF00263 Bacterial type II and III secretion system protein E5E96_01495 PF03466 LysR substrate binding domain E5E96_01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_01500 PF02743 Cache domain E5E96_01500 PF00672 HAMP domain E5E96_01500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_01515 PF03466 LysR substrate binding domain E5E96_01530 PF01551 Peptidase family M23 E5E96_01530 PF01476 LysM domain E5E96_01530 PF08525 Opacity-associated protein A N-terminal motif E5E96_01545 PF03009 Glycerophosphoryl diester phosphodiesterase family E5E96_01550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_01550 PF00672 HAMP domain E5E96_01550 PF02743 Cache domain E5E96_01555 PF00890 FAD binding domain E5E96_01555 PF02910 Fumarate reductase flavoprotein C-term E5E96_01560 PF13183 4Fe-4S dicluster domain E5E96_01560 PF13085 2Fe-2S iron-sulfur cluster binding domain E5E96_01565 PF02300 Fumarate reductase subunit C E5E96_01570 PF02313 Fumarate reductase subunit D E5E96_01590 PF06224 Winged helix DNA-binding domain E5E96_01605 PF00501 AMP-binding enzyme E5E96_01625 PF00486 Transcriptional regulatory protein, C terminal E5E96_01625 PF00072 Response regulator receiver domain E5E96_01630 PF08521 Two-component sensor kinase N-terminal E5E96_01630 PF00512 His Kinase A (phospho-acceptor) domain E5E96_01630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_01650 PF00478 IMP dehydrogenase / GMP reductase domain E5E96_01660 PF09285 Elongation factor P, C-terminal E5E96_01660 PF01132 Elongation factor P (EF-P) OB domain E5E96_01660 PF08207 Elongation factor P (EF-P) KOW-like domain E5E96_01665 PF09997 Predicted membrane protein (DUF2238) E5E96_01675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E5E96_01675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E5E96_01685 PF08448 PAS fold E5E96_01685 PF00990 Diguanylate cyclase, GGDEF domain E5E96_01695 PF13419 Haloacid dehalogenase-like hydrolase E5E96_01705 PF03466 LysR substrate binding domain E5E96_01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_01710 PF00990 Diguanylate cyclase, GGDEF domain E5E96_01710 PF05230 MASE2 domain E5E96_01715 PF00313 'Cold-shock' DNA-binding domain E5E96_01720 PF00857 Isochorismatase family E5E96_01725 PF01494 FAD binding domain E5E96_01730 PF00919 Uncharacterized protein family UPF0004 E5E96_01730 PF04055 Radical SAM superfamily E5E96_01730 PF01938 TRAM domain E5E96_01735 PF02562 PhoH-like protein E5E96_01740 PF02130 Uncharacterized protein family UPF0054 E5E96_01745 PF03471 Transporter associated domain E5E96_01745 PF00571 CBS domain E5E96_01750 PF00795 Carbon-nitrogen hydrolase E5E96_01755 PF07295 Zinc-ribbon containing domain E5E96_01760 PF13603 Leucyl-tRNA synthetase, Domain 2 E5E96_01760 PF00133 tRNA synthetases class I (I, L, M and V) E5E96_01760 PF08264 Anticodon-binding domain of tRNA E5E96_01775 PF01467 Cytidylyltransferase-like E5E96_01785 PF02590 Predicted SPOUT methyltransferase E5E96_01790 PF03717 Penicillin-binding Protein dimerisation domain E5E96_01790 PF00905 Penicillin binding protein transpeptidase domain E5E96_01795 PF01098 Cell cycle protein E5E96_01800 PF01098 Cell cycle protein E5E96_01805 PF13406 Transglycosylase SLT domain E5E96_01810 PF03330 Lytic transglycolase E5E96_01810 PF05036 Sporulation related domain E5E96_01815 PF00768 D-alanyl-D-alanine carboxypeptidase E5E96_01815 PF07943 Penicillin-binding protein 5, C-terminal domain E5E96_01820 PF04359 Protein of unknown function (DUF493) E5E96_01825 PF03099 Biotin/lipoate A/B protein ligase family E5E96_01835 PF04055 Radical SAM superfamily E5E96_01835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E5E96_01845 PF06821 Serine hydrolase E5E96_01850 PF02508 Rnf-Nqr subunit, membrane protein E5E96_01860 PF00583 Acetyltransferase (GNAT) family E5E96_01865 PF13411 MerR HTH family regulatory protein E5E96_01870 PF01368 DHH family E5E96_01870 PF17768 RecJ OB domain E5E96_01870 PF02272 DHHA1 domain E5E96_01875 PF10411 Disulfide bond isomerase protein N-terminus E5E96_01875 PF13098 Thioredoxin-like domain E5E96_01880 PF01741 Large-conductance mechanosensitive channel, MscL E5E96_01885 PF17158 Membrane-associated sensor, integral membrane domain E5E96_01885 PF00990 Diguanylate cyclase, GGDEF domain E5E96_01890 PF00589 Phage integrase family E5E96_01890 PF02899 Phage integrase, N-terminal SAM-like domain E5E96_01895 PF00258 Flavodoxin E5E96_01900 PF01523 Putative modulator of DNA gyrase E5E96_01905 PF01523 Putative modulator of DNA gyrase E5E96_01915 PF03734 L,D-transpeptidase catalytic domain E5E96_01915 PF17969 L,D-transpeptidase C-terminal domain E5E96_01920 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase E5E96_01925 PF02668 Taurine catabolism dioxygenase TauD, TfdA family E5E96_01945 PF01568 Molydopterin dinucleotide binding domain E5E96_01945 PF00384 Molybdopterin oxidoreductase E5E96_01945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E5E96_01950 PF03916 Polysulphide reductase, NrfD E5E96_01955 PF13247 4Fe-4S dicluster domain E5E96_01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_01960 PF00989 PAS fold E5E96_01960 PF00512 His Kinase A (phospho-acceptor) domain E5E96_01965 PF00196 Bacterial regulatory proteins, luxR family E5E96_01965 PF00072 Response regulator receiver domain E5E96_01970 PF06580 Histidine kinase E5E96_01970 PF07694 5TMR of 5TMR-LYT E5E96_01975 PF00072 Response regulator receiver domain E5E96_01975 PF04397 LytTr DNA-binding domain E5E96_01980 PF13722 5TM C-terminal transporter carbon starvation CstA E5E96_01980 PF02554 Carbon starvation protein CstA E5E96_01985 PF03575 Peptidase family S51 E5E96_01990 PF00206 Lyase E5E96_01990 PF10415 Fumarase C C-terminus E5E96_02000 PF02635 DsrE/DsrF-like family E5E96_02005 PF00990 Diguanylate cyclase, GGDEF domain E5E96_02005 PF03707 Bacterial signalling protein N terminal repeat E5E96_02005 PF00563 EAL domain E5E96_02010 PF07690 Major Facilitator Superfamily E5E96_02015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E5E96_02015 PF00575 S1 RNA binding domain E5E96_02015 PF03725 3' exoribonuclease family, domain 2 E5E96_02015 PF00013 KH domain E5E96_02015 PF01138 3' exoribonuclease family, domain 1 E5E96_02020 PF00312 Ribosomal protein S15 E5E96_02025 PF09157 Pseudouridine synthase II TruB, C-terminal E5E96_02025 PF16198 tRNA pseudouridylate synthase B C-terminal domain E5E96_02025 PF01509 TruB family pseudouridylate synthase (N terminal domain) E5E96_02030 PF02033 Ribosome-binding factor A E5E96_02035 PF04760 Translation initiation factor IF-2, N-terminal region E5E96_02035 PF00009 Elongation factor Tu GTP binding domain E5E96_02035 PF08364 Bacterial translation initiation factor IF-2 associated region E5E96_02035 PF11987 Translation-initiation factor 2 E5E96_02040 PF08529 NusA N-terminal domain E5E96_02040 PF13184 NusA-like KH domain E5E96_02040 PF00575 S1 RNA binding domain E5E96_02045 PF17384 RimP C-terminal SH3 domain E5E96_02045 PF02576 RimP N-terminal domain E5E96_02060 PF03840 Preprotein translocase SecG subunit E5E96_02065 PF00121 Triosephosphate isomerase E5E96_02070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E5E96_02070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E5E96_02070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E5E96_02070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E5E96_02075 PF00809 Pterin binding enzyme E5E96_02080 PF17862 AAA+ lid domain E5E96_02080 PF06480 FtsH Extracellular E5E96_02080 PF00004 ATPase family associated with various cellular activities (AAA) E5E96_02080 PF01434 Peptidase family M41 E5E96_02085 PF01728 FtsJ-like methyltransferase E5E96_02090 PF01985 CRS1 / YhbY (CRM) domain E5E96_02100 PF01272 Transcription elongation factor, GreA/GreB, C-term E5E96_02100 PF03449 Transcription elongation factor, N-terminal E5E96_02105 PF00691 OmpA family E5E96_02105 PF13677 Membrane MotB of proton-channel complex MotA/MotB E5E96_02110 PF01618 MotA/TolQ/ExbB proton channel family E5E96_02115 PF02609 Exonuclease VII small subunit E5E96_02120 PF00348 Polyprenyl synthetase E5E96_02125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E5E96_02125 PF02779 Transketolase, pyrimidine binding domain E5E96_02125 PF02780 Transketolase, C-terminal domain E5E96_02130 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_02130 PF12911 N-terminal TM domain of oligopeptide transport permease C E5E96_02140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_02145 PF00005 ABC transporter E5E96_02145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E5E96_02150 PF04608 Phosphatidylglycerophosphatase A E5E96_02155 PF00586 AIR synthase related protein, N-terminal domain E5E96_02155 PF02769 AIR synthase related protein, C-terminal domain E5E96_02160 PF01029 NusB family E5E96_02165 PF00885 6,7-dimethyl-8-ribityllumazine synthase E5E96_02175 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E5E96_02175 PF00925 GTP cyclohydrolase II E5E96_02180 PF00677 Lumazine binding domain E5E96_02185 PF01872 RibD C-terminal domain E5E96_02185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E5E96_02190 PF03477 ATP cone domain E5E96_02200 PF00464 Serine hydroxymethyltransferase E5E96_02210 PF02613 Nitrate reductase delta subunit E5E96_02230 PF00990 Diguanylate cyclase, GGDEF domain E5E96_02230 PF03707 Bacterial signalling protein N terminal repeat E5E96_02230 PF00563 EAL domain E5E96_02230 PF13188 PAS domain E5E96_02240 PF16177 Acetyl-coenzyme A synthetase N-terminus E5E96_02240 PF00501 AMP-binding enzyme E5E96_02240 PF13193 AMP-binding enzyme C-terminal domain E5E96_02245 PF01220 Dehydroquinase class II E5E96_02250 PF00364 Biotin-requiring enzyme E5E96_02255 PF02785 Biotin carboxylase C-terminal domain E5E96_02255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E5E96_02255 PF00289 Biotin carboxylase, N-terminal domain E5E96_02265 PF00474 Sodium:solute symporter family E5E96_02270 PF02378 Phosphotransferase system, EIIC E5E96_02270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E5E96_02270 PF00367 phosphotransferase system, EIIB E5E96_02275 PF03466 LysR substrate binding domain E5E96_02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_02280 PF00107 Zinc-binding dehydrogenase E5E96_02280 PF08240 Alcohol dehydrogenase GroES-like domain E5E96_02295 PF14602 Hexapeptide repeat of succinyl-transferase E5E96_02295 PF12464 Maltose acetyltransferase E5E96_02300 PF00881 Nitroreductase family E5E96_02310 PF01343 Peptidase family S49 E5E96_02325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E5E96_02325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E5E96_02330 PF07023 Protein of unknown function (DUF1315) E5E96_02335 PF17763 Glutaminase/Asparaginase C-terminal domain E5E96_02335 PF00710 Asparaginase, N-terminal E5E96_02340 PF03616 Sodium/glutamate symporter E5E96_02345 PF00672 HAMP domain E5E96_02345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_02345 PF02743 Cache domain E5E96_02355 PF00152 tRNA synthetases class II (D, K and N) E5E96_02355 PF01336 OB-fold nucleic acid binding domain E5E96_02360 PF02567 Phenazine biosynthesis-like protein E5E96_02365 PF00667 FAD binding domain E5E96_02365 PF00175 Oxidoreductase NAD-binding domain E5E96_02365 PF00258 Flavodoxin E5E96_02370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E5E96_02370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E5E96_02375 PF01507 Phosphoadenosine phosphosulfate reductase family E5E96_02380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E5E96_02385 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_02390 PF00571 CBS domain E5E96_02390 PF00005 ABC transporter E5E96_02395 PF00186 Dihydrofolate reductase E5E96_02400 PF12821 Threonine/Serine exporter, ThrE E5E96_02405 PF06738 Putative threonine/serine exporter E5E96_02415 PF00994 Probable molybdopterin binding domain E5E96_02425 PF00109 Beta-ketoacyl synthase, N-terminal domain E5E96_02425 PF02801 Beta-ketoacyl synthase, C-terminal domain E5E96_02440 PF00109 Beta-ketoacyl synthase, N-terminal domain E5E96_02440 PF02801 Beta-ketoacyl synthase, C-terminal domain E5E96_02465 PF00221 Aromatic amino acid lyase E5E96_02475 PF07977 FabA-like domain E5E96_02480 PF13193 AMP-binding enzyme C-terminal domain E5E96_02480 PF00501 AMP-binding enzyme E5E96_02490 PF00550 Phosphopantetheine attachment site E5E96_02495 PF00550 Phosphopantetheine attachment site E5E96_02530 PF03150 Di-haem cytochrome c peroxidase E5E96_02530 PF00034 Cytochrome c E5E96_02535 PF00194 Eukaryotic-type carbonic anhydrase E5E96_02540 PF04227 Indigoidine synthase A like protein E5E96_02545 PF00294 pfkB family carbohydrate kinase E5E96_02570 PF00582 Universal stress protein family E5E96_02580 PF00171 Aldehyde dehydrogenase family E5E96_02585 PF00696 Amino acid kinase family E5E96_02585 PF01472 PUA domain E5E96_02590 PF07417 Sigma factor-binding transcriptional regulator Crl E5E96_02600 PF00156 Phosphoribosyl transferase domain E5E96_02610 PF07687 Peptidase dimerisation domain E5E96_02610 PF01546 Peptidase family M20/M25/M40 E5E96_02620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E5E96_02620 PF00005 ABC transporter E5E96_02625 PF00005 ABC transporter E5E96_02625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E5E96_02635 PF12911 N-terminal TM domain of oligopeptide transport permease C E5E96_02635 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_02640 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_02645 PF07715 TonB-dependent Receptor Plug Domain E5E96_02645 PF00593 TonB dependent receptor E5E96_02655 PF01618 MotA/TolQ/ExbB proton channel family E5E96_02660 PF01618 MotA/TolQ/ExbB proton channel family E5E96_02665 PF02472 Biopolymer transport protein ExbD/TolR E5E96_02680 PF00704 Glycosyl hydrolases family 18 E5E96_02680 PF06483 Chitinase C E5E96_02715 PF00749 tRNA synthetases class I (E and Q), catalytic domain E5E96_02720 PF00749 tRNA synthetases class I (E and Q), catalytic domain E5E96_02725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_02725 PF00672 HAMP domain E5E96_02735 PF00313 'Cold-shock' DNA-binding domain E5E96_02775 PF00929 Exonuclease E5E96_02780 PF03193 RsgA GTPase E5E96_02785 PF02666 Phosphatidylserine decarboxylase E5E96_02790 PF09905 DNA-binding protein VF530 E5E96_02805 PF04224 Protein of unknown function, DUF417 E5E96_02810 PF02627 Carboxymuconolactone decarboxylase family E5E96_02825 PF03707 Bacterial signalling protein N terminal repeat E5E96_02825 PF00563 EAL domain E5E96_02825 PF00990 Diguanylate cyclase, GGDEF domain E5E96_02830 PF06877 Regulator of ribonuclease activity B E5E96_02840 PF00801 PKD domain E5E96_02840 PF05547 Immune inhibitor A peptidase M6 E5E96_02860 PF00561 alpha/beta hydrolase fold E5E96_02865 PF00664 ABC transporter transmembrane region E5E96_02865 PF00005 ABC transporter E5E96_02870 PF06004 Bacterial protein of unknown function (DUF903) E5E96_02875 PF05922 Peptidase inhibitor I9 E5E96_02875 PF00082 Subtilase family E5E96_02880 PF00581 Rhodanese-like domain E5E96_02885 PF04960 Glutaminase E5E96_02890 PF04320 Protein with unknown function (DUF469) E5E96_02895 PF02390 Putative methyltransferase E5E96_02900 PF01483 Proprotein convertase P-domain E5E96_02900 PF04389 Peptidase family M28 E5E96_02905 PF00155 Aminotransferase class I and II E5E96_02910 PF12792 CSS motif domain associated with EAL E5E96_02910 PF00563 EAL domain E5E96_02915 PF01370 NAD dependent epimerase/dehydratase family E5E96_02915 PF08338 Domain of unknown function (DUF1731) E5E96_02925 PF00005 ABC transporter E5E96_02930 PF13472 GDSL-like Lipase/Acylhydrolase family E5E96_02935 PF01584 CheW-like domain E5E96_02935 PF00072 Response regulator receiver domain E5E96_02945 PF06826 Predicted Permease Membrane Region E5E96_02945 PF02080 TrkA-C domain E5E96_02950 PF03006 Haemolysin-III related E5E96_02955 PF00282 Pyridoxal-dependent decarboxylase conserved domain E5E96_02960 PF04279 Intracellular septation protein A E5E96_02965 PF03795 YCII-related domain E5E96_02970 PF00459 Inositol monophosphatase family E5E96_02980 PF00483 Nucleotidyl transferase E5E96_02985 PF00854 POT family E5E96_02990 PF00072 Response regulator receiver domain E5E96_03025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_03030 PF02321 Outer membrane efflux protein E5E96_03035 PF01207 Dihydrouridine synthase (Dus) E5E96_03040 PF02954 Bacterial regulatory protein, Fis family E5E96_03045 PF01810 LysE type translocator E5E96_03070 PF01521 Iron-sulphur cluster biosynthesis E5E96_03080 PF00654 Voltage gated chloride channel E5E96_03085 PF00202 Aminotransferase class-III E5E96_03100 PF01569 PAP2 superfamily E5E96_03110 PF11849 Domain of unknown function (DUF3369) E5E96_03120 PF00893 Small Multidrug Resistance protein E5E96_03125 PF00893 Small Multidrug Resistance protein E5E96_03130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E5E96_03135 PF14814 Bifunctional transglycosylase second domain E5E96_03135 PF00905 Penicillin binding protein transpeptidase domain E5E96_03135 PF00912 Transglycosylase E5E96_03140 PF00270 DEAD/DEAH box helicase E5E96_03140 PF08482 ATP-dependent helicase C-terminal E5E96_03140 PF00271 Helicase conserved C-terminal domain E5E96_03140 PF04408 Helicase associated domain (HA2) E5E96_03150 PF17746 SfsA N-terminal OB domain E5E96_03150 PF03749 Sugar fermentation stimulation protein RE domain E5E96_03155 PF01258 Prokaryotic dksA/traR C4-type zinc finger E5E96_03160 PF00749 tRNA synthetases class I (E and Q), catalytic domain E5E96_03165 PF12627 Probable RNA and SrmB- binding site of polymerase A E5E96_03165 PF12626 Polymerase A arginine-rich C-terminus E5E96_03165 PF01743 Poly A polymerase head domain E5E96_03170 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E5E96_03175 PF02548 Ketopantoate hydroxymethyltransferase E5E96_03180 PF02569 Pantoate-beta-alanine ligase E5E96_03200 PF01869 BadF/BadG/BcrA/BcrD ATPase family E5E96_03205 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component E5E96_03210 PF01061 ABC-2 type transporter E5E96_03215 PF00005 ABC transporter E5E96_03220 PF00156 Phosphoribosyl transferase domain E5E96_03225 PF00440 Bacterial regulatory proteins, tetR family E5E96_03230 PF02441 Flavoprotein E5E96_03235 PF01225 Mur ligase family, catalytic domain E5E96_03235 PF02875 Mur ligase family, glutamate ligase domain E5E96_03235 PF08245 Mur ligase middle domain E5E96_03240 PF00719 Inorganic pyrophosphatase E5E96_03260 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) E5E96_03275 PF00005 ABC transporter E5E96_03295 PF08447 PAS fold E5E96_03295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_03325 PF03600 Citrate transporter E5E96_03325 PF02080 TrkA-C domain E5E96_03330 PF00009 Elongation factor Tu GTP binding domain E5E96_03335 PF01507 Phosphoadenosine phosphosulfate reductase family E5E96_03340 PF10414 Sirohaem synthase dimerisation region E5E96_03340 PF14824 Sirohaem biosynthesis protein central E5E96_03340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E5E96_03345 PF01145 SPFH domain / Band 7 family E5E96_03345 PF16200 C-terminal region of band_7 E5E96_03350 PF01957 NfeD-like C-terminal, partner-binding E5E96_03355 PF00571 CBS domain E5E96_03355 PF01380 SIS domain E5E96_03360 PF00005 ABC transporter E5E96_03360 PF12848 ABC transporter E5E96_03370 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E5E96_03375 PF03466 LysR substrate binding domain E5E96_03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_03380 PF02525 Flavodoxin-like fold E5E96_03410 PF13411 MerR HTH family regulatory protein E5E96_03415 PF00474 Sodium:solute symporter family E5E96_03420 PF03734 L,D-transpeptidase catalytic domain E5E96_03420 PF17969 L,D-transpeptidase C-terminal domain E5E96_03425 PF00924 Mechanosensitive ion channel E5E96_03430 PF00871 Acetokinase family E5E96_03435 PF04074 YhcH/YjgK/YiaL E5E96_03445 PF07731 Multicopper oxidase E5E96_03445 PF00394 Multicopper oxidase E5E96_03445 PF07732 Multicopper oxidase E5E96_03450 PF01177 Asp/Glu/Hydantoin racemase E5E96_03455 PF01810 LysE type translocator E5E96_03460 PF00155 Aminotransferase class I and II E5E96_03460 PF00392 Bacterial regulatory proteins, gntR family E5E96_03485 PF00209 Sodium:neurotransmitter symporter family E5E96_03495 PF00209 Sodium:neurotransmitter symporter family E5E96_03515 PF07690 Major Facilitator Superfamily E5E96_03525 PF01037 Lrp/AsnC ligand binding domain E5E96_03540 PF01047 MarR family E5E96_03545 PF02566 OsmC-like protein E5E96_03550 PF16884 N-terminal domain of oxidoreductase E5E96_03550 PF00107 Zinc-binding dehydrogenase E5E96_03555 PF00293 NUDIX domain E5E96_03565 PF01641 SelR domain E5E96_03570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E5E96_03570 PF00128 Alpha amylase, catalytic domain E5E96_03575 PF00128 Alpha amylase, catalytic domain E5E96_03575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E5E96_03575 PF02806 Alpha amylase, C-terminal all-beta domain E5E96_03580 PF02446 4-alpha-glucanotransferase E5E96_03585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E5E96_03585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E5E96_03590 PF01263 Aldose 1-epimerase E5E96_03595 PF02445 Quinolinate synthetase A protein E5E96_03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_03600 PF00672 HAMP domain E5E96_03675 PF13174 Tetratricopeptide repeat E5E96_03675 PF16331 TolA binding protein trimerisation E5E96_03680 PF00691 OmpA family E5E96_03685 PF07676 WD40-like Beta Propeller Repeat E5E96_03685 PF04052 TolB amino-terminal domain E5E96_03695 PF02472 Biopolymer transport protein ExbD/TolR E5E96_03700 PF01618 MotA/TolQ/ExbB proton channel family E5E96_03705 PF03061 Thioesterase superfamily E5E96_03710 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) E5E96_03715 PF08173 Membrane bound YbgT-like protein E5E96_03720 PF02322 Cytochrome bd terminal oxidase subunit II E5E96_03725 PF01654 Cytochrome bd terminal oxidase subunit I E5E96_03730 PF05491 RuvB C-terminal winged helix domain E5E96_03730 PF17864 RuvB AAA lid domain E5E96_03730 PF05496 Holliday junction DNA helicase RuvB P-loop domain E5E96_03735 PF07499 RuvA, C-terminal domain E5E96_03735 PF01330 RuvA N terminal domain E5E96_03740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_03740 PF00672 HAMP domain E5E96_03745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E5E96_03745 PF04073 Aminoacyl-tRNA editing domain E5E96_03745 PF03129 Anticodon binding domain E5E96_03750 PF00106 short chain dehydrogenase E5E96_03765 PF00378 Enoyl-CoA hydratase/isomerase E5E96_03770 PF10952 Protein of unknown function (DUF2753) E5E96_03775 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_03785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_03800 PF02594 Uncharacterised ACR, YggU family COG1872 E5E96_03805 PF02325 YGGT family E5E96_03810 PF14748 Pyrroline-5-carboxylate reductase dimerisation E5E96_03810 PF03807 NADP oxidoreductase coenzyme F420-dependent E5E96_03815 PF01168 Alanine racemase, N-terminal domain E5E96_03820 PF00437 Type II/IV secretion system protein E5E96_03825 PF00437 Type II/IV secretion system protein E5E96_03830 PF03883 Peroxide stress protein YaaA E5E96_03835 PF00270 DEAD/DEAH box helicase E5E96_03835 PF00271 Helicase conserved C-terminal domain E5E96_03840 PF05175 Methyltransferase small domain E5E96_03845 PF05525 Branched-chain amino acid transport protein E5E96_03850 PF05525 Branched-chain amino acid transport protein E5E96_03865 PF01475 Ferric uptake regulator family E5E96_03870 PF01207 Dihydrouridine synthase (Dus) E5E96_03885 PF00216 Bacterial DNA-binding protein E5E96_03895 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ E5E96_03900 PF07238 PilZ domain E5E96_03905 PF18073 Rubredoxin metal binding domain E5E96_03920 PF18429 Domain of unknown function (DUF5609) E5E96_03930 PF00563 EAL domain E5E96_03930 PF13426 PAS domain E5E96_03930 PF00990 Diguanylate cyclase, GGDEF domain E5E96_03930 PF08448 PAS fold E5E96_03930 PF05231 MASE1 E5E96_03930 PF08447 PAS fold E5E96_03935 PF01048 Phosphorylase superfamily E5E96_03940 PF01676 Metalloenzyme superfamily E5E96_03945 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E5E96_03945 PF02885 Glycosyl transferase family, helical bundle domain E5E96_03945 PF00591 Glycosyl transferase family, a/b domain E5E96_03950 PF01791 DeoC/LacD family aldolase E5E96_03960 PF01773 Na+ dependent nucleoside transporter N-terminus E5E96_03960 PF07662 Na+ dependent nucleoside transporter C-terminus E5E96_03960 PF07670 Nucleoside recognition E5E96_03965 PF01026 TatD related DNase E5E96_03970 PF00114 Pilin (bacterial filament) E5E96_03970 PF07963 Prokaryotic N-terminal methylation motif E5E96_03980 PF01938 TRAM domain E5E96_03980 PF05958 tRNA (Uracil-5-)-methyltransferase E5E96_03985 PF00909 Ammonium Transporter Family E5E96_04000 PF03739 Lipopolysaccharide export system permease LptF/LptG E5E96_04005 PF03739 Lipopolysaccharide export system permease LptF/LptG E5E96_04010 PF00883 Cytosol aminopeptidase family, catalytic domain E5E96_04010 PF02789 Cytosol aminopeptidase family, N-terminal domain E5E96_04015 PF04364 DNA polymerase III chi subunit, HolC E5E96_04020 PF10458 Valyl tRNA synthetase tRNA binding arm E5E96_04020 PF00133 tRNA synthetases class I (I, L, M and V) E5E96_04020 PF08264 Anticodon-binding domain of tRNA E5E96_04025 PF03471 Transporter associated domain E5E96_04025 PF01595 Cyclin M transmembrane N-terminal domain E5E96_04025 PF00571 CBS domain E5E96_04030 PF09335 SNARE associated Golgi protein E5E96_04035 PF00768 D-alanyl-D-alanine carboxypeptidase E5E96_04070 PF02599 Global regulator protein family E5E96_04075 PF00696 Amino acid kinase family E5E96_04075 PF13840 ACT domain E5E96_04075 PF01842 ACT domain E5E96_04080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E5E96_04080 PF02272 DHHA1 domain E5E96_04080 PF01411 tRNA synthetases class II (A) E5E96_04085 PF02631 RecX family E5E96_04090 PF00154 recA bacterial DNA recombination protein E5E96_04095 PF02464 Competence-damaged protein E5E96_04100 PF01624 MutS domain I E5E96_04100 PF05192 MutS domain III E5E96_04100 PF05190 MutS family domain IV E5E96_04100 PF00488 MutS domain V E5E96_04100 PF05188 MutS domain II E5E96_04105 PF02028 BCCT, betaine/carnitine/choline family transporter E5E96_04120 PF04222 Protein of unknown function (DUF416) E5E96_04125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E5E96_04130 PF01476 LysM domain E5E96_04130 PF01551 Peptidase family M23 E5E96_04130 PF08525 Opacity-associated protein A N-terminal motif E5E96_04150 PF01297 Zinc-uptake complex component A periplasmic E5E96_04155 PF00005 ABC transporter E5E96_04160 PF00950 ABC 3 transport family E5E96_04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_04165 PF03466 LysR substrate binding domain E5E96_04170 PF00892 EamA-like transporter family E5E96_04175 PF03167 Uracil DNA glycosylase superfamily E5E96_04180 PF00892 EamA-like transporter family E5E96_04190 PF01541 GIY-YIG catalytic domain E5E96_04205 PF04012 PspA/IM30 family E5E96_04210 PF01553 Acyltransferase E5E96_04230 PF00578 AhpC/TSA family E5E96_04235 PF00684 DnaJ central domain E5E96_04235 PF01556 DnaJ C terminal domain E5E96_04235 PF00226 DnaJ domain E5E96_04275 PF13676 TIR domain E5E96_04280 PF00521 DNA gyrase/topoisomerase IV, subunit A E5E96_04280 PF03989 DNA gyrase C-terminal domain, beta-propeller E5E96_04285 PF01751 Toprim domain E5E96_04285 PF00986 DNA gyrase B subunit, carboxyl terminus E5E96_04285 PF00204 DNA gyrase B E5E96_04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_04290 PF04632 Fusaric acid resistance protein family E5E96_04295 PF00529 HlyD membrane-fusion protein of T1SS E5E96_04295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_04300 PF07869 Protein of unknown function (DUF1656) E5E96_04310 PF00293 NUDIX domain E5E96_04315 PF05728 Uncharacterised protein family (UPF0227) E5E96_04320 PF00149 Calcineurin-like phosphoesterase E5E96_04325 PF06853 Protein of unknown function (DUF1249) E5E96_04330 PF00293 NUDIX domain E5E96_04335 PF02321 Outer membrane efflux protein E5E96_04340 PF00294 pfkB family carbohydrate kinase E5E96_04340 PF01467 Cytidylyltransferase-like E5E96_04345 PF03279 Bacterial lipid A biosynthesis acyltransferase E5E96_04360 PF01865 Protein of unknown function DUF47 E5E96_04365 PF01384 Phosphate transporter family E5E96_04370 PF04073 Aminoacyl-tRNA editing domain E5E96_04375 PF07350 Protein of unknown function (DUF1479) E5E96_04395 PF00155 Aminotransferase class I and II E5E96_04395 PF00392 Bacterial regulatory proteins, gntR family E5E96_04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_04400 PF03466 LysR substrate binding domain E5E96_04405 PF03788 LrgA family E5E96_04410 PF04172 LrgB-like family E5E96_04425 PF01966 HD domain E5E96_04425 PF01743 Poly A polymerase head domain E5E96_04425 PF12627 Probable RNA and SrmB- binding site of polymerase A E5E96_04430 PF01471 Putative peptidoglycan binding domain E5E96_04430 PF13401 AAA domain E5E96_04435 PF16537 Type II secretion system protein B E5E96_04440 PF10576 Iron-sulfur binding domain of endonuclease III E5E96_04440 PF00633 Helix-hairpin-helix motif E5E96_04440 PF14815 NUDIX domain E5E96_04440 PF00730 HhH-GPD superfamily base excision DNA repair protein E5E96_04445 PF04362 Bacterial Fe(2+) trafficking E5E96_04450 PF01464 Transglycosylase SLT domain E5E96_04450 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain E5E96_04455 PF04076 Bacterial OB fold (BOF) protein E5E96_04460 PF00657 GDSL-like Lipase/Acylhydrolase E5E96_04470 PF01389 OmpA-like transmembrane domain E5E96_04470 PF00691 OmpA family E5E96_04475 PF03886 ABC-type transport auxiliary lipoprotein component E5E96_04480 PF02470 MlaD protein E5E96_04485 PF04403 Paraquat-inducible protein A E5E96_04490 PF17209 Hfq protein E5E96_04495 PF13419 Haloacid dehalogenase-like hydrolase E5E96_04505 PF01590 GAF domain E5E96_04505 PF00990 Diguanylate cyclase, GGDEF domain E5E96_04505 PF00563 EAL domain E5E96_04505 PF00360 Phytochrome region E5E96_04510 PF00701 Dihydrodipicolinate synthetase family E5E96_04515 PF08468 Methyltransferase small domain N-terminal E5E96_04515 PF05175 Methyltransferase small domain E5E96_04520 PF00483 Nucleotidyl transferase E5E96_04525 PF00534 Glycosyl transferases group 1 E5E96_04525 PF08323 Starch synthase catalytic domain E5E96_04565 PF03553 Na+/H+ antiporter family E5E96_04570 PF03466 LysR substrate binding domain E5E96_04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_04575 PF13416 Bacterial extracellular solute-binding protein E5E96_04580 PF00005 ABC transporter E5E96_04580 PF08402 TOBE domain E5E96_04585 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_04590 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_04595 PF00171 Aldehyde dehydrogenase family E5E96_04605 PF00892 EamA-like transporter family E5E96_04610 PF01037 Lrp/AsnC ligand binding domain E5E96_04615 PF12464 Maltose acetyltransferase E5E96_04615 PF14602 Hexapeptide repeat of succinyl-transferase E5E96_04620 PF11941 Domain of unknown function (DUF3459) E5E96_04620 PF00128 Alpha amylase, catalytic domain E5E96_04625 PF00367 phosphotransferase system, EIIB E5E96_04625 PF02378 Phosphotransferase system, EIIC E5E96_04630 PF00356 Bacterial regulatory proteins, lacI family E5E96_04660 PF02142 MGS-like domain E5E96_04670 PF00210 Ferritin-like domain E5E96_04685 PF17176 tRNA-binding domain E5E96_04685 PF05127 Helicase E5E96_04685 PF13718 GNAT acetyltransferase 2 E5E96_04685 PF08351 Domain of unknown function (DUF1726) E5E96_04690 PF00106 short chain dehydrogenase E5E96_04695 PF00072 Response regulator receiver domain E5E96_04695 PF01584 CheW-like domain E5E96_04740 PF02660 Glycerol-3-phosphate acyltransferase E5E96_04745 PF02152 Dihydroneopterin aldolase E5E96_04750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E5E96_04760 PF07690 Major Facilitator Superfamily E5E96_04765 PF02492 CobW/HypB/UreG, nucleotide-binding domain E5E96_04765 PF07683 Cobalamin synthesis protein cobW C-terminal domain E5E96_04770 PF01565 FAD binding domain E5E96_04770 PF04030 D-arabinono-1,4-lactone oxidase E5E96_04775 PF01810 LysE type translocator E5E96_04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_04780 PF03466 LysR substrate binding domain E5E96_04785 PF12792 CSS motif domain associated with EAL E5E96_04785 PF00563 EAL domain E5E96_04790 PF11791 Aconitate B N-terminal domain E5E96_04790 PF06434 Aconitate hydratase 2 N-terminus E5E96_04790 PF00330 Aconitase family (aconitate hydratase) E5E96_04795 PF01734 Patatin-like phospholipase E5E96_04800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_04800 PF00672 HAMP domain E5E96_04800 PF12729 Four helix bundle sensory module for signal transduction E5E96_04805 PF00672 HAMP domain E5E96_04805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_04805 PF12729 Four helix bundle sensory module for signal transduction E5E96_04815 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_04815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E5E96_04820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E5E96_04820 PF00364 Biotin-requiring enzyme E5E96_04820 PF02817 e3 binding domain E5E96_04825 PF00456 Transketolase, thiamine diphosphate binding domain E5E96_04825 PF17831 Pyruvate dehydrogenase E1 component middle domain E5E96_04830 PF00392 Bacterial regulatory proteins, gntR family E5E96_04830 PF07729 FCD domain E5E96_04835 PF01510 N-acetylmuramoyl-L-alanine amidase E5E96_04845 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E5E96_04845 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E5E96_04855 PF07963 Prokaryotic N-terminal methylation motif E5E96_04860 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E5E96_04860 PF00437 Type II/IV secretion system protein E5E96_04865 PF00482 Type II secretion system (T2SS), protein F E5E96_04870 PF06750 Bacterial Peptidase A24 N-terminal domain E5E96_04870 PF01478 Type IV leader peptidase family E5E96_04875 PF01121 Dephospho-CoA kinase E5E96_04880 PF07072 Cell division protein E5E96_04885 PF03884 DNA gyrase inhibitor YacG E5E96_04890 PF00293 NUDIX domain E5E96_04900 PF07516 SecA Wing and Scaffold domain E5E96_04900 PF07517 SecA DEAD-like domain E5E96_04900 PF01043 SecA preprotein cross-linking domain E5E96_04900 PF02810 SEC-C motif E5E96_04910 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E5E96_04915 PF00091 Tubulin/FtsZ family, GTPase domain E5E96_04915 PF12327 FtsZ family, C-terminal domain E5E96_04920 PF02491 SHS2 domain inserted in FTSA E5E96_04925 PF08478 POTRA domain, FtsQ-type E5E96_04925 PF03799 Cell division protein FtsQ E5E96_04930 PF02875 Mur ligase family, glutamate ligase domain E5E96_04930 PF01225 Mur ligase family, catalytic domain E5E96_04930 PF08245 Mur ligase middle domain E5E96_04935 PF03033 Glycosyltransferase family 28 N-terminal domain E5E96_04935 PF04101 Glycosyltransferase family 28 C-terminal domain E5E96_04940 PF01098 Cell cycle protein E5E96_04945 PF08245 Mur ligase middle domain E5E96_04945 PF02875 Mur ligase family, glutamate ligase domain E5E96_04950 PF00953 Glycosyl transferase family 4 E5E96_04950 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 E5E96_04955 PF02875 Mur ligase family, glutamate ligase domain E5E96_04955 PF01225 Mur ligase family, catalytic domain E5E96_04955 PF08245 Mur ligase middle domain E5E96_04960 PF08245 Mur ligase middle domain E5E96_04960 PF02875 Mur ligase family, glutamate ligase domain E5E96_04960 PF01225 Mur ligase family, catalytic domain E5E96_04965 PF03717 Penicillin-binding Protein dimerisation domain E5E96_04965 PF00905 Penicillin binding protein transpeptidase domain E5E96_04970 PF04999 Cell division protein FtsL E5E96_04975 PF01795 MraW methylase family E5E96_04980 PF02381 MraZ protein, putative antitoxin-like E5E96_04990 PF01476 LysM domain E5E96_04990 PF01464 Transglycosylase SLT domain E5E96_05000 PF13677 Membrane MotB of proton-channel complex MotA/MotB E5E96_05000 PF00691 OmpA family E5E96_05005 PF01618 MotA/TolQ/ExbB proton channel family E5E96_05010 PF04545 Sigma-70, region 4 E5E96_05010 PF04542 Sigma-70 region 2 E5E96_05030 PF02561 Flagellar protein FliS E5E96_05035 PF07196 Flagellin hook IN motif E5E96_05035 PF07195 Flagellar hook-associated protein 2 C-terminus E5E96_05035 PF02465 Flagellar hook-associated protein 2 N-terminus E5E96_05040 PF00669 Bacterial flagellin N-terminal helical region E5E96_05040 PF00700 Bacterial flagellin C-terminal helical region E5E96_05045 PF00700 Bacterial flagellin C-terminal helical region E5E96_05045 PF00669 Bacterial flagellin N-terminal helical region E5E96_05065 PF00669 Bacterial flagellin N-terminal helical region E5E96_05070 PF00460 Flagella basal body rod protein E5E96_05070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_05080 PF02119 Flagellar P-ring protein E5E96_05085 PF02107 Flagellar L-ring protein E5E96_05090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_05090 PF00460 Flagella basal body rod protein E5E96_05095 PF00460 Flagella basal body rod protein E5E96_05095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_05100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_05100 PF00460 Flagella basal body rod protein E5E96_05100 PF07559 Flagellar basal body protein FlaE E5E96_05105 PF13861 FlgD Tudor-like domain E5E96_05105 PF13860 FlgD Ig-like domain E5E96_05105 PF03963 Flagellar hook capping protein - N-terminal region E5E96_05110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_05110 PF00460 Flagella basal body rod protein E5E96_05115 PF00460 Flagella basal body rod protein E5E96_05140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E5E96_05140 PF18269 T3SS EscN ATPase C-terminal domain E5E96_05150 PF14841 FliG middle domain E5E96_05150 PF01706 FliG C-terminal domain E5E96_05150 PF14842 FliG N-terminal domain E5E96_05155 PF08345 Flagellar M-ring protein C-terminal E5E96_05155 PF01514 Secretory protein of YscJ/FliF family E5E96_05160 PF02049 Flagellar hook-basal body complex protein FliE E5E96_05165 PF02954 Bacterial regulatory protein, Fis family E5E96_05165 PF00158 Sigma-54 interaction domain E5E96_05165 PF00072 Response regulator receiver domain E5E96_05170 PF00771 FHIPEP family E5E96_05175 PF01312 FlhB HrpN YscU SpaS Family E5E96_05180 PF01311 Bacterial export proteins, family 1 E5E96_05185 PF01313 Bacterial export proteins, family 3 E5E96_05190 PF00813 FliP family E5E96_05195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E5E96_05210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E5E96_05215 PF04348 LppC putative lipoprotein E5E96_05220 PF02021 Uncharacterised protein family UPF0102 E5E96_05225 PF13580 SIS domain E5E96_05230 PF04972 BON domain E5E96_05235 PF04386 Stringent starvation protein B E5E96_05240 PF02798 Glutathione S-transferase, N-terminal domain E5E96_05240 PF00043 Glutathione S-transferase, C-terminal domain E5E96_05245 PF02167 Cytochrome C1 family E5E96_05250 PF00032 Cytochrome b(C-terminal)/b6/petD E5E96_05250 PF00033 Cytochrome b/b6/petB E5E96_05255 PF00355 Rieske [2Fe-2S] domain E5E96_05255 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal E5E96_05260 PF00380 Ribosomal protein S9/S16 E5E96_05265 PF00572 Ribosomal protein L13 E5E96_05270 PF03969 AFG1-like ATPase E5E96_05280 PF00595 PDZ domain E5E96_05280 PF13180 PDZ domain E5E96_05285 PF13180 PDZ domain E5E96_05315 PF01979 Amidohydrolase family E5E96_05320 PF03841 L-seryl-tRNA selenium transferase E5E96_05325 PF07071 KDGP aldolase E5E96_05330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E5E96_05330 PF08279 HTH domain E5E96_05330 PF05043 Mga helix-turn-helix domain E5E96_05330 PF00874 PRD domain E5E96_05335 PF00381 PTS HPr component phosphorylation site E5E96_05340 PF03668 P-loop ATPase protein family E5E96_05345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E5E96_05350 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E5E96_05355 PF00309 Sigma-54 factor, Activator interacting domain (AID) E5E96_05355 PF04552 Sigma-54, DNA binding domain E5E96_05355 PF04963 Sigma-54 factor, core binding domain E5E96_05360 PF12399 Branched-chain amino acid ATP-binding cassette transporter E5E96_05360 PF00005 ABC transporter E5E96_05365 PF03968 OstA-like protein E5E96_05370 PF06835 Lipopolysaccharide-assembly, LptC-related E5E96_05380 PF01380 SIS domain E5E96_05380 PF00571 CBS domain E5E96_05385 PF00005 ABC transporter E5E96_05390 PF02405 Permease MlaE E5E96_05395 PF02470 MlaD protein E5E96_05400 PF05494 MlaC protein E5E96_05410 PF01722 BolA-like protein E5E96_05415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E5E96_05420 PF01523 Putative modulator of DNA gyrase E5E96_05425 PF04751 Protein of unknown function (DUF615) E5E96_05435 PF04363 Protein of unknown function (DUF496) E5E96_05465 PF01381 Helix-turn-helix E5E96_05465 PF07883 Cupin domain E5E96_05470 PF03594 Benzoate membrane transport protein E5E96_05480 PF02219 Methylenetetrahydrofolate reductase E5E96_05495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_05495 PF00672 HAMP domain E5E96_05500 PF03922 OmpW family E5E96_05505 PF00990 Diguanylate cyclase, GGDEF domain E5E96_05505 PF17158 Membrane-associated sensor, integral membrane domain E5E96_05510 PF17755 UvrA DNA-binding domain E5E96_05510 PF00005 ABC transporter E5E96_05510 PF17760 UvrA interaction domain E5E96_05515 PF00196 Bacterial regulatory proteins, luxR family E5E96_05520 PF00436 Single-strand binding protein family E5E96_05560 PF09722 Protein of unknown function (DUF2384) E5E96_05565 PF01381 Helix-turn-helix E5E96_05595 PF00313 'Cold-shock' DNA-binding domain E5E96_05600 PF00593 TonB dependent receptor E5E96_05600 PF07715 TonB-dependent Receptor Plug Domain E5E96_05605 PF01590 GAF domain E5E96_05605 PF00563 EAL domain E5E96_05605 PF00360 Phytochrome region E5E96_05605 PF00990 Diguanylate cyclase, GGDEF domain E5E96_05610 PF00672 HAMP domain E5E96_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_05610 PF00512 His Kinase A (phospho-acceptor) domain E5E96_05615 PF00486 Transcriptional regulatory protein, C terminal E5E96_05615 PF00072 Response regulator receiver domain E5E96_05640 PF00990 Diguanylate cyclase, GGDEF domain E5E96_05640 PF17151 Periplasmic sensor domain E5E96_05650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E5E96_05665 PF13538 UvrD-like helicase C-terminal domain E5E96_05670 PF00580 UvrD/REP helicase N-terminal domain E5E96_05670 PF13361 UvrD-like helicase C-terminal domain E5E96_05670 PF12705 PD-(D/E)XK nuclease superfamily E5E96_05675 PF17946 RecC C-terminal domain E5E96_05680 PF07681 DoxX E5E96_05685 PF02678 Pirin E5E96_05685 PF17954 Quercetinase C-terminal cupin domain E5E96_05695 PF03466 LysR substrate binding domain E5E96_05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_05705 PF00392 Bacterial regulatory proteins, gntR family E5E96_05705 PF07702 UTRA domain E5E96_05720 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_05730 PF00005 ABC transporter E5E96_05730 PF12857 TOBE-like domain E5E96_05740 PF00990 Diguanylate cyclase, GGDEF domain E5E96_05760 PF00583 Acetyltransferase (GNAT) family E5E96_05765 PF00199 Catalase E5E96_05765 PF06628 Catalase-related immune-responsive E5E96_05790 PF00293 NUDIX domain E5E96_05795 PF01594 AI-2E family transporter E5E96_05800 PF00106 short chain dehydrogenase E5E96_05805 PF04371 Porphyromonas-type peptidyl-arginine deiminase E5E96_05810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_05810 PF03466 LysR substrate binding domain E5E96_05815 PF02954 Bacterial regulatory protein, Fis family E5E96_05815 PF00158 Sigma-54 interaction domain E5E96_05815 PF00989 PAS fold E5E96_05820 PF00465 Iron-containing alcohol dehydrogenase E5E96_05825 PF03610 PTS system fructose IIA component E5E96_05825 PF05524 PEP-utilising enzyme, N-terminal E5E96_05825 PF00381 PTS HPr component phosphorylation site E5E96_05825 PF00391 PEP-utilising enzyme, mobile domain E5E96_05830 PF02734 DAK2 domain E5E96_05835 PF02733 Dak1 domain E5E96_05840 PF00860 Permease family E5E96_05885 PF00009 Elongation factor Tu GTP binding domain E5E96_05885 PF03143 Elongation factor Tu C-terminal domain E5E96_05885 PF03144 Elongation factor Tu domain 2 E5E96_05890 PF03144 Elongation factor Tu domain 2 E5E96_05890 PF14492 Elongation Factor G, domain II E5E96_05890 PF00009 Elongation factor Tu GTP binding domain E5E96_05890 PF00679 Elongation factor G C-terminus E5E96_05890 PF03764 Elongation factor G, domain IV E5E96_05895 PF00177 Ribosomal protein S7p/S5e E5E96_05900 PF00164 Ribosomal protein S12/S23 E5E96_05905 PF04077 DsrH like protein E5E96_05910 PF02635 DsrE/DsrF-like family E5E96_05915 PF02635 DsrE/DsrF-like family E5E96_05920 PF01042 Endoribonuclease L-PSP E5E96_05925 PF08348 YheO-like PAS domain E5E96_05925 PF13309 HTH domain E5E96_05930 PF00623 RNA polymerase Rpb1, domain 2 E5E96_05930 PF04983 RNA polymerase Rpb1, domain 3 E5E96_05930 PF05000 RNA polymerase Rpb1, domain 4 E5E96_05930 PF04998 RNA polymerase Rpb1, domain 5 E5E96_05930 PF04997 RNA polymerase Rpb1, domain 1 E5E96_05935 PF04563 RNA polymerase beta subunit E5E96_05935 PF00562 RNA polymerase Rpb2, domain 6 E5E96_05935 PF04565 RNA polymerase Rpb2, domain 3 E5E96_05935 PF10385 RNA polymerase beta subunit external 1 domain E5E96_05935 PF04561 RNA polymerase Rpb2, domain 2 E5E96_05935 PF04560 RNA polymerase Rpb2, domain 7 E5E96_05940 PF16320 Ribosomal protein L7/L12 dimerisation domain E5E96_05940 PF00542 Ribosomal protein L7/L12 C-terminal domain E5E96_05945 PF00466 Ribosomal protein L10 E5E96_05950 PF00687 Ribosomal protein L1p/L10e family E5E96_05955 PF00298 Ribosomal protein L11, RNA binding domain E5E96_05955 PF03946 Ribosomal protein L11, N-terminal domain E5E96_05960 PF02357 Transcription termination factor nusG E5E96_05960 PF00467 KOW motif E5E96_05965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E5E96_05975 PF00009 Elongation factor Tu GTP binding domain E5E96_05975 PF03144 Elongation factor Tu domain 2 E5E96_05975 PF03143 Elongation factor Tu C-terminal domain E5E96_05990 PF00485 Phosphoribulokinase / Uridine kinase family E5E96_05995 PF02237 Biotin protein ligase C terminal domain E5E96_05995 PF08279 HTH domain E5E96_05995 PF03099 Biotin/lipoate A/B protein ligase family E5E96_06000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E5E96_06000 PF01565 FAD binding domain E5E96_06005 PF02080 TrkA-C domain E5E96_06005 PF02254 TrkA-N domain E5E96_06010 PF02386 Cation transport protein E5E96_06015 PF12833 Helix-turn-helix domain E5E96_06015 PF12852 Cupin E5E96_06030 PF01131 DNA topoisomerase E5E96_06030 PF01751 Toprim domain E5E96_06035 PF03264 NapC/NirT cytochrome c family, N-terminal region E5E96_06040 PF00384 Molybdopterin oxidoreductase E5E96_06040 PF18364 Molybdopterin oxidoreductase N-terminal domain E5E96_06040 PF01568 Molydopterin dinucleotide binding domain E5E96_06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_06050 PF08918 PhoQ Sensor E5E96_06055 PF00072 Response regulator receiver domain E5E96_06055 PF00486 Transcriptional regulatory protein, C terminal E5E96_06070 PF01794 Ferric reductase like transmembrane component E5E96_06075 PF00174 Oxidoreductase molybdopterin binding domain E5E96_06085 PF06496 Protein of unknown function (DUF1097) E5E96_06090 PF00158 Sigma-54 interaction domain E5E96_06090 PF00072 Response regulator receiver domain E5E96_06100 PF00512 His Kinase A (phospho-acceptor) domain E5E96_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_06120 PF00571 CBS domain E5E96_06120 PF00478 IMP dehydrogenase / GMP reductase domain E5E96_06125 PF10063 Uncharacterized integral membrane protein (DUF2301) E5E96_06135 PF01037 Lrp/AsnC ligand binding domain E5E96_06140 PF03590 Aspartate-ammonia ligase E5E96_06155 PF00004 ATPase family associated with various cellular activities (AAA) E5E96_06155 PF07724 AAA domain (Cdc48 subfamily) E5E96_06155 PF02861 Clp amino terminal domain, pathogenicity island component E5E96_06155 PF10431 C-terminal, D2-small domain, of ClpB protein E5E96_06155 PF17871 AAA lid domain E5E96_06165 PF01479 S4 domain E5E96_06165 PF00849 RNA pseudouridylate synthase E5E96_06170 PF13525 Outer membrane lipoprotein E5E96_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_06175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E5E96_06180 PF00375 Sodium:dicarboxylate symporter family E5E96_06185 PF03313 Serine dehydratase alpha chain E5E96_06195 PF02233 NAD(P) transhydrogenase beta subunit E5E96_06200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E5E96_06200 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E5E96_06200 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E5E96_06205 PF00465 Iron-containing alcohol dehydrogenase E5E96_06210 PF06719 AraC-type transcriptional regulator N-terminus E5E96_06210 PF12833 Helix-turn-helix domain E5E96_06215 PF08212 Lipocalin-like domain E5E96_06220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_06220 PF00672 HAMP domain E5E96_06220 PF02743 Cache domain E5E96_06225 PF02666 Phosphatidylserine decarboxylase E5E96_06245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E5E96_06245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E5E96_06250 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E5E96_06250 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E5E96_06255 PF02863 Arginine repressor, C-terminal domain E5E96_06255 PF01316 Arginine repressor, DNA binding domain E5E96_06260 PF03606 C4-dicarboxylate anaerobic carrier E5E96_06265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E5E96_06265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E5E96_06270 PF00696 Amino acid kinase family E5E96_06295 PF02743 Cache domain E5E96_06295 PF00672 HAMP domain E5E96_06295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_06300 PF02653 Branched-chain amino acid transport system / permease component E5E96_06305 PF00005 ABC transporter E5E96_06310 PF13407 Periplasmic binding protein domain E5E96_06315 PF02929 Beta galactosidase small chain E5E96_06315 PF16353 Domain of unknown function(DUF4981) E5E96_06315 PF00703 Glycosyl hydrolases family 2 E5E96_06315 PF02837 Glycosyl hydrolases family 2, sugar binding domain E5E96_06315 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E5E96_06320 PF00356 Bacterial regulatory proteins, lacI family E5E96_06325 PF16363 GDP-mannose 4,6 dehydratase E5E96_06330 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E5E96_06330 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E5E96_06335 PF00288 GHMP kinases N terminal domain E5E96_06335 PF08544 GHMP kinases C terminal E5E96_06335 PF10509 Galactokinase galactose-binding signature E5E96_06340 PF01263 Aldose 1-epimerase E5E96_06345 PF00248 Aldo/keto reductase family E5E96_06350 PF02673 Bacitracin resistance protein BacA E5E96_06355 PF12973 ChrR Cupin-like domain E5E96_06360 PF04545 Sigma-70, region 4 E5E96_06360 PF04542 Sigma-70 region 2 E5E96_06370 PF05746 DALR anticodon binding domain E5E96_06370 PF00750 tRNA synthetases class I (R) E5E96_06370 PF03485 Arginyl tRNA synthetase N terminal domain E5E96_06380 PF00227 Proteasome subunit E5E96_06385 PF07724 AAA domain (Cdc48 subfamily) E5E96_06385 PF10431 C-terminal, D2-small domain, of ClpB protein E5E96_06385 PF00004 ATPase family associated with various cellular activities (AAA) E5E96_06390 PF07690 Major Facilitator Superfamily E5E96_06395 PF03466 LysR substrate binding domain E5E96_06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_06400 PF04324 BFD-like [2Fe-2S] binding domain E5E96_06400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E5E96_06400 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_06400 PF18267 Rubredoxin NAD+ reductase C-terminal domain E5E96_06400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E5E96_06405 PF13806 Rieske-like [2Fe-2S] domain E5E96_06410 PF01226 Formate/nitrite transporter E5E96_06415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E5E96_06415 PF14824 Sirohaem biosynthesis protein central E5E96_06415 PF10414 Sirohaem synthase dimerisation region E5E96_06420 PF03448 MgtE intracellular N domain E5E96_06420 PF01769 Divalent cation transporter E5E96_06420 PF00571 CBS domain E5E96_06425 PF00672 HAMP domain E5E96_06425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_06430 PF03737 Aldolase/RraA E5E96_06435 PF02592 Putative vitamin uptake transporter E5E96_06445 PF02696 Uncharacterized ACR, YdiU/UPF0061 family E5E96_06450 PF00034 Cytochrome c E5E96_06455 PF09382 RQC domain E5E96_06455 PF16124 RecQ zinc-binding E5E96_06455 PF00271 Helicase conserved C-terminal domain E5E96_06455 PF00270 DEAD/DEAH box helicase E5E96_06455 PF00570 HRDC domain E5E96_06460 PF03061 Thioesterase superfamily E5E96_06475 PF03475 3-alpha domain E5E96_06475 PF03473 MOSC domain E5E96_06480 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_06485 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_06490 PF08402 TOBE domain E5E96_06490 PF00005 ABC transporter E5E96_06495 PF13416 Bacterial extracellular solute-binding protein E5E96_06500 PF13416 Bacterial extracellular solute-binding protein E5E96_06505 PF00202 Aminotransferase class-III E5E96_06510 PF00120 Glutamine synthetase, catalytic domain E5E96_06515 PF01258 Prokaryotic dksA/traR C4-type zinc finger E5E96_06530 PF05981 CreA protein E5E96_06535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E5E96_06535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E5E96_06540 PF00012 Hsp70 protein E5E96_06555 PF00128 Alpha amylase, catalytic domain E5E96_06555 PF02903 Alpha amylase, N-terminal ig-like domain E5E96_06560 PF02719 Polysaccharide biosynthesis protein E5E96_06565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E5E96_06570 PF12804 MobA-like NTP transferase domain E5E96_06575 PF02885 Glycosyl transferase family, helical bundle domain E5E96_06575 PF00117 Glutamine amidotransferase class-I E5E96_06575 PF00591 Glycosyl transferase family, a/b domain E5E96_06610 PF00534 Glycosyl transferases group 1 E5E96_06620 PF03275 UDP-galactopyranose mutase E5E96_06625 PF00535 Glycosyl transferase family 2 E5E96_06640 PF00501 AMP-binding enzyme E5E96_06640 PF13193 AMP-binding enzyme C-terminal domain E5E96_06660 PF02348 Cytidylyltransferase E5E96_06670 PF03102 NeuB family E5E96_06670 PF08666 SAF domain E5E96_06690 PF09940 Domain of unknown function (DUF2172) E5E96_06690 PF16254 Domain of unknown function (DUF4910) E5E96_06690 PF16221 winged helix-turn-helix E5E96_06725 PF05958 tRNA (Uracil-5-)-methyltransferase E5E96_06730 PF00072 Response regulator receiver domain E5E96_06730 PF00486 Transcriptional regulatory protein, C terminal E5E96_06735 PF00672 HAMP domain E5E96_06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_06735 PF00512 His Kinase A (phospho-acceptor) domain E5E96_06745 PF03949 Malic enzyme, NAD binding domain E5E96_06745 PF00390 Malic enzyme, N-terminal domain E5E96_06750 PF13460 NAD(P)H-binding E5E96_06750 PF11066 Protein of unknown function (DUF2867) E5E96_06755 PF01197 Ribosomal protein L31 E5E96_06760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E5E96_06760 PF18074 Primosomal protein N C-terminal domain E5E96_06760 PF00270 DEAD/DEAH box helicase E5E96_06760 PF17764 3′ DNA-binding domain (3′BD) E5E96_06760 PF00271 Helicase conserved C-terminal domain E5E96_06770 PF01389 OmpA-like transmembrane domain E5E96_06770 PF00691 OmpA family E5E96_06775 PF00291 Pyridoxal-phosphate dependent enzyme E5E96_06775 PF00585 C-terminal regulatory domain of Threonine dehydratase E5E96_06780 PF00920 Dehydratase family E5E96_06785 PF01063 Amino-transferase class IV E5E96_06795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E5E96_06795 PF00205 Thiamine pyrophosphate enzyme, central domain E5E96_06795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E5E96_06805 PF01078 Magnesium chelatase, subunit ChlI E5E96_06805 PF13335 Magnesium chelatase, subunit ChlI C-terminal E5E96_06810 PF01553 Acyltransferase E5E96_06815 PF01553 Acyltransferase E5E96_06820 PF04463 Protein of unknown function (DUF523) E5E96_06830 PF00857 Isochorismatase family E5E96_06835 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E5E96_06835 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E5E96_06840 PF01323 DSBA-like thioredoxin domain E5E96_06845 PF01636 Phosphotransferase enzyme family E5E96_06850 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase E5E96_06850 PF12801 4Fe-4S binding domain E5E96_06850 PF13746 4Fe-4S dicluster domain E5E96_06855 PF06288 Protein of unknown function (DUF1040) E5E96_06860 PF00360 Phytochrome region E5E96_06860 PF00990 Diguanylate cyclase, GGDEF domain E5E96_06860 PF01590 GAF domain E5E96_06860 PF00563 EAL domain E5E96_06865 PF09278 MerR, DNA binding E5E96_06865 PF00376 MerR family regulatory protein E5E96_06870 PF00403 Heavy-metal-associated domain E5E96_06875 PF00156 Phosphoribosyl transferase domain E5E96_06880 PF03725 3' exoribonuclease family, domain 2 E5E96_06880 PF01138 3' exoribonuclease family, domain 1 E5E96_06885 PF08340 Domain of unknown function (DUF1732) E5E96_06885 PF03755 YicC-like family, N-terminal region E5E96_06905 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) E5E96_06920 PF01370 NAD dependent epimerase/dehydratase family E5E96_06925 PF08360 QacR-like protein, C-terminal region E5E96_06925 PF00440 Bacterial regulatory proteins, tetR family E5E96_06930 PF00155 Aminotransferase class I and II E5E96_06935 PF00107 Zinc-binding dehydrogenase E5E96_06935 PF08240 Alcohol dehydrogenase GroES-like domain E5E96_06940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E5E96_06945 PF00990 Diguanylate cyclase, GGDEF domain E5E96_06945 PF03707 Bacterial signalling protein N terminal repeat E5E96_06945 PF00563 EAL domain E5E96_06950 PF00580 UvrD/REP helicase N-terminal domain E5E96_06950 PF13361 UvrD-like helicase C-terminal domain E5E96_06955 PF00266 Aminotransferase class-V E5E96_06960 PF02657 Fe-S metabolism associated domain E5E96_06965 PF00899 ThiF family E5E96_07005 PF01177 Asp/Glu/Hydantoin racemase E5E96_07010 PF07715 TonB-dependent Receptor Plug Domain E5E96_07010 PF00593 TonB dependent receptor E5E96_07015 PF03466 LysR substrate binding domain E5E96_07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_07030 PF00731 AIR carboxylase E5E96_07035 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E5E96_07035 PF02222 ATP-grasp domain E5E96_07040 PF07690 Major Facilitator Superfamily E5E96_07045 PF04397 LytTr DNA-binding domain E5E96_07045 PF00072 Response regulator receiver domain E5E96_07050 PF07694 5TMR of 5TMR-LYT E5E96_07050 PF06580 Histidine kinase E5E96_07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_07060 PF00512 His Kinase A (phospho-acceptor) domain E5E96_07060 PF01627 Hpt domain E5E96_07060 PF00989 PAS fold E5E96_07060 PF00072 Response regulator receiver domain E5E96_07060 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_07065 PF00196 Bacterial regulatory proteins, luxR family E5E96_07065 PF00072 Response regulator receiver domain E5E96_07070 PF16449 Fimbrillin MatB E5E96_07075 PF18649 EcpB C-terminal domain E5E96_07080 PF16967 E-set like domain E5E96_07080 PF15976 CS1-pili formation C-terminal E5E96_07095 PF01810 LysE type translocator E5E96_07100 PF07690 Major Facilitator Superfamily E5E96_07110 PF00210 Ferritin-like domain E5E96_07115 PF08448 PAS fold E5E96_07115 PF00990 Diguanylate cyclase, GGDEF domain E5E96_07120 PF07055 Enoyl reductase FAD binding domain E5E96_07120 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E5E96_07120 PF12241 Trans-2-enoyl-CoA reductase catalytic region E5E96_07125 PF00582 Universal stress protein family E5E96_07130 PF00579 tRNA synthetases class I (W and Y) E5E96_07135 PF03466 LysR substrate binding domain E5E96_07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_07155 PF00892 EamA-like transporter family E5E96_07170 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E5E96_07175 PF00625 Guanylate kinase E5E96_07180 PF01192 RNA polymerase Rpb6 E5E96_07185 PF04607 Region found in RelA / SpoT proteins E5E96_07185 PF02824 TGS domain E5E96_07185 PF13291 ACT domain E5E96_07190 PF12105 SpoU, rRNA methylase, C-terminal E5E96_07190 PF00588 SpoU rRNA Methylase family E5E96_07195 PF12146 Serine aminopeptidase, S33 E5E96_07230 PF00440 Bacterial regulatory proteins, tetR family E5E96_07235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_07240 PF00873 AcrB/AcrD/AcrF family E5E96_07245 PF00512 His Kinase A (phospho-acceptor) domain E5E96_07245 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_07250 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_07250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E5E96_07275 PF03814 Potassium-transporting ATPase A subunit E5E96_07285 PF02669 K+-transporting ATPase, c chain E5E96_07290 PF00512 His Kinase A (phospho-acceptor) domain E5E96_07290 PF02702 Osmosensitive K+ channel His kinase sensor domain E5E96_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_07290 PF13492 GAF domain E5E96_07290 PF13493 Domain of unknown function (DUF4118) E5E96_07295 PF00072 Response regulator receiver domain E5E96_07295 PF00486 Transcriptional regulatory protein, C terminal E5E96_07300 PF07690 Major Facilitator Superfamily E5E96_07315 PF00155 Aminotransferase class I and II E5E96_07320 PF00011 Hsp20/alpha crystallin family E5E96_07325 PF00011 Hsp20/alpha crystallin family E5E96_07330 PF13280 WYL domain E5E96_07330 PF08279 HTH domain E5E96_07340 PF00204 DNA gyrase B E5E96_07340 PF01751 Toprim domain E5E96_07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_07340 PF18053 DNA gyrase B subunit insert domain E5E96_07340 PF00986 DNA gyrase B subunit, carboxyl terminus E5E96_07345 PF02463 RecF/RecN/SMC N terminal domain E5E96_07350 PF00712 DNA polymerase III beta subunit, N-terminal domain E5E96_07350 PF02767 DNA polymerase III beta subunit, central domain E5E96_07350 PF02768 DNA polymerase III beta subunit, C-terminal domain E5E96_07355 PF11638 DnaA N-terminal domain E5E96_07355 PF08299 Bacterial dnaA protein helix-turn-helix E5E96_07355 PF00308 Bacterial dnaA protein E5E96_07360 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_07365 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_07380 PF00468 Ribosomal protein L34 E5E96_07385 PF00825 Ribonuclease P E5E96_07390 PF01809 Putative membrane protein insertion efficiency factor E5E96_07395 PF02096 60Kd inner membrane protein E5E96_07395 PF14849 YidC periplasmic domain E5E96_07400 PF12631 MnmE helical domain E5E96_07400 PF10396 GTP-binding protein TrmE N-terminus E5E96_07400 PF01926 50S ribosome-binding GTPase E5E96_07405 PF01032 FecCD transport family E5E96_07420 PF00005 ABC transporter E5E96_07425 PF07715 TonB-dependent Receptor Plug Domain E5E96_07425 PF00593 TonB dependent receptor E5E96_07430 PF00258 Flavodoxin E5E96_07435 PF01134 Glucose inhibited division protein A E5E96_07435 PF13932 GidA associated domain E5E96_07440 PF02527 rRNA small subunit methyltransferase G E5E96_07445 PF13614 AAA domain E5E96_07450 PF02195 ParB-like nuclease domain E5E96_07450 PF17762 HTH domain found in ParB protein E5E96_07460 PF00119 ATP synthase A chain E5E96_07465 PF00137 ATP synthase subunit C E5E96_07470 PF00430 ATP synthase B/B' CF(0) E5E96_07475 PF00213 ATP synthase delta (OSCP) subunit E5E96_07480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E5E96_07480 PF02874 ATP synthase alpha/beta family, beta-barrel domain E5E96_07480 PF00306 ATP synthase alpha/beta chain, C terminal domain E5E96_07485 PF00231 ATP synthase E5E96_07490 PF02874 ATP synthase alpha/beta family, beta-barrel domain E5E96_07490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E5E96_07495 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E5E96_07495 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain E5E96_07500 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_07500 PF12804 MobA-like NTP transferase domain E5E96_07500 PF14602 Hexapeptide repeat of succinyl-transferase E5E96_07505 PF06123 Inner membrane protein CreD E5E96_07510 PF00905 Penicillin binding protein transpeptidase domain E5E96_07520 PF00486 Transcriptional regulatory protein, C terminal E5E96_07520 PF00072 Response regulator receiver domain E5E96_07525 PF00455 DeoR C terminal sensor domain E5E96_07525 PF08220 DeoR-like helix-turn-helix domain E5E96_07535 PF00196 Bacterial regulatory proteins, luxR family E5E96_07535 PF03472 Autoinducer binding domain E5E96_07545 PF01618 MotA/TolQ/ExbB proton channel family E5E96_07550 PF01618 MotA/TolQ/ExbB proton channel family E5E96_07555 PF02472 Biopolymer transport protein ExbD/TolR E5E96_07560 PF03544 Gram-negative bacterial TonB protein C-terminal E5E96_07600 PF07969 Amidohydrolase family E5E96_07605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E5E96_07610 PF01209 ubiE/COQ5 methyltransferase family E5E96_07615 PF02036 SCP-2 sterol transfer family E5E96_07620 PF03109 ABC1 family E5E96_07625 PF02416 mttA/Hcf106 family E5E96_07630 PF02416 mttA/Hcf106 family E5E96_07635 PF00902 Sec-independent protein translocase protein (TatC) E5E96_07640 PF01026 TatD related DNase E5E96_07645 PF00490 Delta-aminolevulinic acid dehydratase E5E96_07650 PF01432 Peptidase family M3 E5E96_07655 PF03707 Bacterial signalling protein N terminal repeat E5E96_07655 PF00563 EAL domain E5E96_07655 PF00990 Diguanylate cyclase, GGDEF domain E5E96_07660 PF04445 Putative SAM-dependent methyltransferase E5E96_07675 PF02541 Ppx/GppA phosphatase family E5E96_07680 PF00271 Helicase conserved C-terminal domain E5E96_07680 PF00270 DEAD/DEAH box helicase E5E96_07685 PF00085 Thioredoxin E5E96_07690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E5E96_07690 PF07497 Rho termination factor, RNA-binding domain E5E96_07690 PF07498 Rho termination factor, N-terminal domain E5E96_07700 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E5E96_07705 PF00175 Oxidoreductase NAD-binding domain E5E96_07710 PF04380 Membrane fusogenic activity E5E96_07715 PF12262 Bacterial virulence factor lipase N-terminal E5E96_07720 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease E5E96_07720 PF01694 Rhomboid family E5E96_07725 PF00581 Rhodanese-like domain E5E96_07740 PF00005 ABC transporter E5E96_07745 PF12399 Branched-chain amino acid ATP-binding cassette transporter E5E96_07745 PF00005 ABC transporter E5E96_07750 PF11862 Domain of unknown function (DUF3382) E5E96_07750 PF02653 Branched-chain amino acid transport system / permease component E5E96_07755 PF02653 Branched-chain amino acid transport system / permease component E5E96_07760 PF13458 Periplasmic binding protein E5E96_07765 PF00356 Bacterial regulatory proteins, lacI family E5E96_07770 PF01590 GAF domain E5E96_07770 PF00158 Sigma-54 interaction domain E5E96_07775 PF00301 Rubredoxin E5E96_07775 PF00753 Metallo-beta-lactamase superfamily E5E96_07775 PF00258 Flavodoxin E5E96_07780 PF18113 Rubredoxin binding C-terminal domain E5E96_07780 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_07790 PF12801 4Fe-4S binding domain E5E96_07795 PF03222 Tryptophan/tyrosine permease family E5E96_07805 PF05932 Tir chaperone protein (CesT) family E5E96_07810 PF03545 Yersinia virulence determinant (YopE) E5E96_07810 PF03496 ADP-ribosyltransferase exoenzyme E5E96_07830 PF01202 Shikimate kinase E5E96_07840 PF02092 Glycyl-tRNA synthetase beta subunit E5E96_07840 PF05746 DALR anticodon binding domain E5E96_07845 PF02091 Glycyl-tRNA synthetase alpha subunit E5E96_07850 PF03352 Methyladenine glycosylase E5E96_07855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_07855 PF02743 Cache domain E5E96_07855 PF00672 HAMP domain E5E96_07860 PF00691 OmpA family E5E96_07860 PF13488 Glycine zipper E5E96_07865 PF01042 Endoribonuclease L-PSP E5E96_07870 PF01206 Sulfurtransferase TusA E5E96_07880 PF01547 Bacterial extracellular solute-binding protein E5E96_07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_07885 PF00512 His Kinase A (phospho-acceptor) domain E5E96_07885 PF00672 HAMP domain E5E96_07890 PF00072 Response regulator receiver domain E5E96_07890 PF00486 Transcriptional regulatory protein, C terminal E5E96_07895 PF02803 Thiolase, C-terminal domain E5E96_07895 PF00108 Thiolase, N-terminal domain E5E96_07900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E5E96_07900 PF00378 Enoyl-CoA hydratase/isomerase E5E96_07900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E5E96_07905 PF13193 AMP-binding enzyme C-terminal domain E5E96_07905 PF00501 AMP-binding enzyme E5E96_07910 PF00557 Metallopeptidase family M24 E5E96_07915 PF09186 Domain of unknown function (DUF1949) E5E96_07915 PF01205 Uncharacterized protein family UPF0029 E5E96_07920 PF02386 Cation transport protein E5E96_07925 PF12724 Flavodoxin domain E5E96_07950 PF13607 Succinyl-CoA ligase like flavodoxin domain E5E96_07950 PF13380 CoA binding domain E5E96_07950 PF00583 Acetyltransferase (GNAT) family E5E96_07965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_07965 PF03466 LysR substrate binding domain E5E96_07970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E5E96_07970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E5E96_07975 PF00342 Phosphoglucose isomerase E5E96_07990 PF00924 Mechanosensitive ion channel E5E96_07990 PF05552 Conserved TM helix E5E96_07995 PF00440 Bacterial regulatory proteins, tetR family E5E96_08000 PF00692 dUTPase E5E96_08005 PF04127 DNA / pantothenate metabolism flavoprotein E5E96_08005 PF02441 Flavoprotein E5E96_08010 PF04002 RadC-like JAB domain E5E96_08015 PF00830 Ribosomal L28 family E5E96_08020 PF00471 Ribosomal protein L33 E5E96_08030 PF06827 Zinc finger found in FPG and IleRS E5E96_08030 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E5E96_08030 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E5E96_08035 PF04393 Protein of unknown function (DUF535) E5E96_08040 PF01467 Cytidylyltransferase-like E5E96_08045 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E5E96_08050 PF00535 Glycosyl transferase family 2 E5E96_08055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E5E96_08060 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E5E96_08065 PF03611 PTS system sugar-specific permease component E5E96_08075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E5E96_08080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E5E96_08080 PF00356 Bacterial regulatory proteins, lacI family E5E96_08085 PF08240 Alcohol dehydrogenase GroES-like domain E5E96_08085 PF00107 Zinc-binding dehydrogenase E5E96_08105 PF03748 Flagellar basal body-associated protein FliL E5E96_08110 PF04345 Chorismate lyase E5E96_08115 PF01040 UbiA prenyltransferase family E5E96_08120 PF01553 Acyltransferase E5E96_08125 PF00717 Peptidase S24-like E5E96_08125 PF01726 LexA DNA binding domain E5E96_08145 PF02630 SCO1/SenC E5E96_08150 PF01554 MatE E5E96_08155 PF00588 SpoU rRNA Methylase family E5E96_08160 PF00512 His Kinase A (phospho-acceptor) domain E5E96_08160 PF16527 Two-component sensor protein CpxA, periplasmic domain E5E96_08160 PF00672 HAMP domain E5E96_08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_08165 PF00072 Response regulator receiver domain E5E96_08165 PF00486 Transcriptional regulatory protein, C terminal E5E96_08170 PF16916 Dimerisation domain of Zinc Transporter E5E96_08170 PF01545 Cation efflux family E5E96_08175 PF06426 Serine acetyltransferase, N-terminal E5E96_08175 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_08185 PF06005 Cell division protein ZapB E5E96_08195 PF01612 3'-5' exonuclease E5E96_08195 PF00476 DNA polymerase family A E5E96_08195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E5E96_08195 PF01367 5'-3' exonuclease, C-terminal SAM fold E5E96_08200 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_08235 PF00356 Bacterial regulatory proteins, lacI family E5E96_08240 PF00703 Glycosyl hydrolases family 2 E5E96_08240 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E5E96_08240 PF02837 Glycosyl hydrolases family 2, sugar binding domain E5E96_08240 PF02929 Beta galactosidase small chain E5E96_08240 PF16353 Domain of unknown function(DUF4981) E5E96_08245 PF04074 YhcH/YjgK/YiaL E5E96_08250 PF13520 Amino acid permease E5E96_08255 PF01588 Putative tRNA binding domain E5E96_08260 PF13520 Amino acid permease E5E96_08265 PF13593 SBF-like CPA transporter family (DUF4137) E5E96_08270 PF12867 DinB superfamily E5E96_08270 PF03781 Sulfatase-modifying factor enzyme 1 E5E96_08280 PF00756 Putative esterase E5E96_08285 PF08240 Alcohol dehydrogenase GroES-like domain E5E96_08285 PF00107 Zinc-binding dehydrogenase E5E96_08290 PF03466 LysR substrate binding domain E5E96_08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_08315 PF13361 UvrD-like helicase C-terminal domain E5E96_08315 PF00580 UvrD/REP helicase N-terminal domain E5E96_08325 PF01966 HD domain E5E96_08325 PF13286 Phosphohydrolase-associated domain E5E96_08350 PF14001 YdfZ protein E5E96_08375 PF06206 CpeT/CpcT family (DUF1001) E5E96_08385 PF01810 LysE type translocator E5E96_08390 PF04143 Sulphur transport E5E96_08395 PF12729 Four helix bundle sensory module for signal transduction E5E96_08395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_08395 PF00672 HAMP domain E5E96_08400 PF00690 Cation transporter/ATPase, N-terminus E5E96_08400 PF00689 Cation transporting ATPase, C-terminus E5E96_08405 PF01810 LysE type translocator E5E96_08410 PF12833 Helix-turn-helix domain E5E96_08415 PF00892 EamA-like transporter family E5E96_08425 PF00171 Aldehyde dehydrogenase family E5E96_08430 PF07883 Cupin domain E5E96_08430 PF01381 Helix-turn-helix E5E96_08435 PF00202 Aminotransferase class-III E5E96_08440 PF00171 Aldehyde dehydrogenase family E5E96_08445 PF02540 NAD synthase E5E96_08445 PF00117 Glutamine amidotransferase class-I E5E96_08445 PF00958 GMP synthase C terminal domain E5E96_08450 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E5E96_08450 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E5E96_08455 PF00294 pfkB family carbohydrate kinase E5E96_08460 PF02082 Transcriptional regulator E5E96_08475 PF02646 RmuC family E5E96_08480 PF02386 Cation transport protein E5E96_08485 PF02080 TrkA-C domain E5E96_08485 PF02254 TrkA-N domain E5E96_08490 PF01189 16S rRNA methyltransferase RsmB/F E5E96_08490 PF01029 NusB family E5E96_08495 PF02911 Formyl transferase, C-terminal domain E5E96_08495 PF00551 Formyl transferase E5E96_08500 PF01327 Polypeptide deformylase E5E96_08510 PF02481 DNA recombination-mediator protein A E5E96_08510 PF17782 DprA winged helix domain E5E96_08515 PF04361 Protein of unknown function (DUF494) E5E96_08520 PF01396 Topoisomerase DNA binding C4 zinc finger E5E96_08525 PF00731 AIR carboxylase E5E96_08530 PF01300 Telomere recombination E5E96_08535 PF01218 Coproporphyrinogen III oxidase E5E96_08540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E5E96_08540 PF01488 Shikimate / quinate 5-dehydrogenase E5E96_08540 PF08501 Shikimate dehydrogenase substrate binding domain E5E96_08545 PF07369 Protein of unknown function (DUF1488) E5E96_08550 PF01926 50S ribosome-binding GTPase E5E96_08555 PF00034 Cytochrome c E5E96_08565 PF04220 Der GTPase activator (YihI) E5E96_08570 PF10675 Protein of unknown function (DUF2489) E5E96_08575 PF04055 Radical SAM superfamily E5E96_08575 PF06969 HemN C-terminal domain E5E96_08580 PF00962 Adenosine/AMP deaminase E5E96_08585 PF00158 Sigma-54 interaction domain E5E96_08585 PF02954 Bacterial regulatory protein, Fis family E5E96_08585 PF00072 Response regulator receiver domain E5E96_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_08590 PF00989 PAS fold E5E96_08590 PF00512 His Kinase A (phospho-acceptor) domain E5E96_08600 PF00120 Glutamine synthetase, catalytic domain E5E96_08600 PF03951 Glutamine synthetase, beta-Grasp domain E5E96_08610 PF03631 Virulence factor BrkB E5E96_08615 PF02580 D-Tyr-tRNA(Tyr) deacylase E5E96_08625 PF00583 Acetyltransferase (GNAT) family E5E96_08625 PF09500 Putative thioesterase (yiiD_Cterm) E5E96_08635 PF00271 Helicase conserved C-terminal domain E5E96_08635 PF17191 RecG wedge domain E5E96_08635 PF00270 DEAD/DEAH box helicase E5E96_08640 PF13091 PLD-like domain E5E96_08645 PF02447 GntP family permease E5E96_08650 PF01202 Shikimate kinase E5E96_08655 PF00920 Dehydratase family E5E96_08660 PF01081 KDPG and KHG aldolase E5E96_08665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E5E96_08665 PF00356 Bacterial regulatory proteins, lacI family E5E96_08675 PF01551 Peptidase family M23 E5E96_08680 PF01676 Metalloenzyme superfamily E5E96_08680 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E5E96_08685 PF00581 Rhodanese-like domain E5E96_08690 PF02556 Preprotein translocase subunit SecB E5E96_08695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E5E96_08695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E5E96_08700 PF01521 Iron-sulphur cluster biosynthesis E5E96_08700 PF01106 NifU-like domain E5E96_08710 PF00561 alpha/beta hydrolase fold E5E96_08730 PF09371 Tex-like protein N-terminal domain E5E96_08730 PF00575 S1 RNA binding domain E5E96_08730 PF16921 Tex protein YqgF-like domain E5E96_08730 PF17674 HHH domain E5E96_08735 PF03449 Transcription elongation factor, N-terminal E5E96_08735 PF01272 Transcription elongation factor, GreA/GreB, C-term E5E96_08740 PF00486 Transcriptional regulatory protein, C terminal E5E96_08740 PF00072 Response regulator receiver domain E5E96_08745 PF00672 HAMP domain E5E96_08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_08745 PF00512 His Kinase A (phospho-acceptor) domain E5E96_08755 PF00338 Ribosomal protein S10p/S20e E5E96_08760 PF00297 Ribosomal protein L3 E5E96_08765 PF00573 Ribosomal protein L4/L1 family E5E96_08770 PF00276 Ribosomal protein L23 E5E96_08775 PF03947 Ribosomal Proteins L2, C-terminal domain E5E96_08775 PF00181 Ribosomal Proteins L2, RNA binding domain E5E96_08780 PF00203 Ribosomal protein S19 E5E96_08785 PF00237 Ribosomal protein L22p/L17e E5E96_08790 PF07650 KH domain E5E96_08790 PF00189 Ribosomal protein S3, C-terminal domain E5E96_08795 PF00252 Ribosomal protein L16p/L10e E5E96_08800 PF00831 Ribosomal L29 protein E5E96_08805 PF00366 Ribosomal protein S17 E5E96_08810 PF00238 Ribosomal protein L14p/L23e E5E96_08815 PF00467 KOW motif E5E96_08815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E5E96_08820 PF00673 ribosomal L5P family C-terminus E5E96_08820 PF00281 Ribosomal protein L5 E5E96_08825 PF00253 Ribosomal protein S14p/S29e E5E96_08830 PF00410 Ribosomal protein S8 E5E96_08835 PF00347 Ribosomal protein L6 E5E96_08840 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E5E96_08845 PF03719 Ribosomal protein S5, C-terminal domain E5E96_08845 PF00333 Ribosomal protein S5, N-terminal domain E5E96_08850 PF00327 Ribosomal protein L30p/L7e E5E96_08855 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E5E96_08860 PF00344 SecY translocase E5E96_08865 PF00444 Ribosomal protein L36 E5E96_08870 PF00416 Ribosomal protein S13/S18 E5E96_08875 PF00411 Ribosomal protein S11 E5E96_08880 PF01479 S4 domain E5E96_08880 PF00163 Ribosomal protein S4/S9 N-terminal domain E5E96_08885 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E5E96_08885 PF01000 RNA polymerase Rpb3/RpoA insert domain E5E96_08885 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E5E96_08890 PF01196 Ribosomal protein L17 E5E96_08940 PF00999 Sodium/hydrogen exchanger family E5E96_08940 PF02254 TrkA-N domain E5E96_08945 PF02525 Flavodoxin-like fold E5E96_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_08950 PF03466 LysR substrate binding domain E5E96_08955 PF00106 short chain dehydrogenase E5E96_08970 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E5E96_08970 PF00326 Prolyl oligopeptidase family E5E96_08995 PF07947 YhhN family E5E96_09000 PF07690 Major Facilitator Superfamily E5E96_09005 PF13533 Biotin-lipoyl like E5E96_09010 PF03466 LysR substrate binding domain E5E96_09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_09020 PF00375 Sodium:dicarboxylate symporter family E5E96_09025 PF10678 Protein of unknown function (DUF2492) E5E96_09030 PF01914 MarC family integral membrane protein E5E96_09035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_09035 PF03466 LysR substrate binding domain E5E96_09040 PF02416 mttA/Hcf106 family E5E96_09050 PF01464 Transglycosylase SLT domain E5E96_09055 PF13091 PLD-like domain E5E96_09065 PF00440 Bacterial regulatory proteins, tetR family E5E96_09085 PF00448 SRP54-type protein, GTPase domain E5E96_09085 PF02881 SRP54-type protein, helical bundle domain E5E96_09090 PF00005 ABC transporter E5E96_09095 PF18075 FtsX extracellular domain E5E96_09100 PF04542 Sigma-70 region 2 E5E96_09100 PF04545 Sigma-70, region 4 E5E96_09100 PF00140 Sigma-70 factor, region 1.2 E5E96_09105 PF00484 Carbonic anhydrase E5E96_09110 PF07702 UTRA domain E5E96_09110 PF00392 Bacterial regulatory proteins, gntR family E5E96_09115 PF01979 Amidohydrolase family E5E96_09120 PF00491 Arginase family E5E96_09125 PF01175 Urocanase Rossmann-like domain E5E96_09125 PF17391 Urocanase N-terminal domain E5E96_09125 PF17392 Urocanase C-terminal domain E5E96_09130 PF00221 Aromatic amino acid lyase E5E96_09135 PF01699 Sodium/calcium exchanger protein E5E96_09140 PF12792 CSS motif domain associated with EAL E5E96_09140 PF00563 EAL domain E5E96_09145 PF00990 Diguanylate cyclase, GGDEF domain E5E96_09145 PF00563 EAL domain E5E96_09145 PF17157 Gammaproteobacterial periplasmic sensor domain E5E96_09175 PF03958 Bacterial type II/III secretion system short domain E5E96_09175 PF00263 Bacterial type II and III secretion system protein E5E96_09190 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E5E96_09190 PF00437 Type II/IV secretion system protein E5E96_09195 PF00482 Type II secretion system (T2SS), protein F E5E96_09210 PF07963 Prokaryotic N-terminal methylation motif E5E96_09210 PF08334 Type II secretion system (T2SS), protein G E5E96_09215 PF07963 Prokaryotic N-terminal methylation motif E5E96_09215 PF00114 Pilin (bacterial filament) E5E96_09245 PF04085 rod shape-determining protein MreC E5E96_09250 PF04093 rod shape-determining protein MreD E5E96_09255 PF02545 Maf-like protein E5E96_09265 PF13502 AsmA-like C-terminal region E5E96_09265 PF13116 Protein of unknown function E5E96_09275 PF00795 Carbon-nitrogen hydrolase E5E96_09280 PF01523 Putative modulator of DNA gyrase E5E96_09285 PF01380 SIS domain E5E96_09285 PF01418 Helix-turn-helix domain, rpiR family E5E96_09305 PF00367 phosphotransferase system, EIIB E5E96_09305 PF02378 Phosphotransferase system, EIIC E5E96_09310 PF13580 SIS domain E5E96_09320 PF01914 MarC family integral membrane protein E5E96_09325 PF07690 Major Facilitator Superfamily E5E96_09335 PF00072 Response regulator receiver domain E5E96_09340 PF00672 HAMP domain E5E96_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_09340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E5E96_09340 PF00072 Response regulator receiver domain E5E96_09340 PF00512 His Kinase A (phospho-acceptor) domain E5E96_09340 PF01627 Hpt domain E5E96_09345 PF13581 Histidine kinase-like ATPase domain E5E96_09350 PF08678 Rsbr N terminal E5E96_09350 PF01740 STAS domain E5E96_09355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_09355 PF08447 PAS fold E5E96_09355 PF13426 PAS domain E5E96_09370 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) E5E96_09375 PF04228 Putative neutral zinc metallopeptidase E5E96_09385 PF08668 HDOD domain E5E96_09400 PF00999 Sodium/hydrogen exchanger family E5E96_09405 PF02607 B12 binding domain E5E96_09405 PF02965 Vitamin B12 dependent methionine synthase, activation domain E5E96_09405 PF00809 Pterin binding enzyme E5E96_09405 PF02310 B12 binding domain E5E96_09405 PF02574 Homocysteine S-methyltransferase E5E96_09410 PF08443 RimK-like ATP-grasp domain E5E96_09410 PF18030 RimK PreATP-grasp domain E5E96_09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_09425 PF00486 Transcriptional regulatory protein, C terminal E5E96_09425 PF00072 Response regulator receiver domain E5E96_09435 PF05935 Arylsulfotransferase (ASST) E5E96_09435 PF17425 Arylsulfotransferase Ig-like domain E5E96_09440 PF01964 Radical SAM ThiC family E5E96_09440 PF13667 ThiC-associated domain E5E96_09445 PF02581 Thiamine monophosphate synthase E5E96_09450 PF00899 ThiF family E5E96_09460 PF05690 Thiazole biosynthesis protein ThiG E5E96_09465 PF06968 Biotin and Thiamin Synthesis associated domain E5E96_09465 PF04055 Radical SAM superfamily E5E96_09485 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_09490 PF13036 Peptidoglycan-synthase activator LpoB E5E96_09510 PF00990 Diguanylate cyclase, GGDEF domain E5E96_09510 PF17151 Periplasmic sensor domain E5E96_09520 PF06055 Exopolysaccharide synthesis, ExoD E5E96_09535 PF08803 Putative mono-oxygenase ydhR E5E96_09540 PF01638 HxlR-like helix-turn-helix E5E96_09565 PF07715 TonB-dependent Receptor Plug Domain E5E96_09565 PF00593 TonB dependent receptor E5E96_09580 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E5E96_09585 PF03692 Putative zinc- or iron-chelating domain E5E96_09595 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase E5E96_09600 PF02602 Uroporphyrinogen-III synthase HemD E5E96_09605 PF03900 Porphobilinogen deaminase, C-terminal domain E5E96_09605 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E5E96_09610 PF01295 Adenylate cyclase, class-I E5E96_09610 PF12633 Adenylate cyclase NT domain E5E96_09615 PF02230 Phospholipase/Carboxylesterase E5E96_09620 PF01491 Frataxin-like domain E5E96_09630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E5E96_09630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E5E96_09635 PF01678 Diaminopimelate epimerase E5E96_09645 PF02899 Phage integrase, N-terminal SAM-like domain E5E96_09645 PF00589 Phage integrase family E5E96_09650 PF13419 Haloacid dehalogenase-like hydrolase E5E96_09660 PF13545 Crp-like helix-turn-helix domain E5E96_09660 PF00027 Cyclic nucleotide-binding domain E5E96_09670 PF07722 Peptidase C26 E5E96_09690 PF00005 ABC transporter E5E96_09700 PF00994 Probable molybdopterin binding domain E5E96_09700 PF02464 Competence-damaged protein E5E96_09705 PF01966 HD domain E5E96_09705 PF00013 KH domain E5E96_09705 PF12072 Domain of unknown function (DUF3552) E5E96_09710 PF04204 Homoserine O-succinyltransferase E5E96_09720 PF01037 Lrp/AsnC ligand binding domain E5E96_09725 PF00884 Sulfatase E5E96_09740 PF00128 Alpha amylase, catalytic domain E5E96_09740 PF16657 Maltogenic Amylase, C-terminal domain E5E96_09740 PF02903 Alpha amylase, N-terminal ig-like domain E5E96_09745 PF02308 MgtC family E5E96_09765 PF00106 short chain dehydrogenase E5E96_09770 PF03577 Peptidase family C69 E5E96_09795 PF01053 Cys/Met metabolism PLP-dependent enzyme E5E96_09805 PF12793 Sugar transport-related sRNA regulator N-term E5E96_09805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_09820 PF03280 Proteobacterial lipase chaperone protein E5E96_09825 PF00561 alpha/beta hydrolase fold E5E96_09840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E5E96_09840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E5E96_09845 PF02698 DUF218 domain E5E96_09850 PF08453 Peptidase family M9 N-terminal E5E96_09850 PF01752 Collagenase E5E96_09860 PF00419 Fimbrial protein E5E96_09870 PF00577 Outer membrane usher protein E5E96_09870 PF13953 PapC C-terminal domain E5E96_09870 PF13954 PapC N-terminal domain E5E96_09875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E5E96_09875 PF02753 Pili assembly chaperone PapD, C-terminal domain E5E96_09880 PF00419 Fimbrial protein E5E96_09885 PF00419 Fimbrial protein E5E96_09895 PF00501 AMP-binding enzyme E5E96_09905 PF00378 Enoyl-CoA hydratase/isomerase E5E96_09910 PF12697 Alpha/beta hydrolase family E5E96_09920 PF00425 chorismate binding enzyme E5E96_09925 PF01040 UbiA prenyltransferase family E5E96_09950 PF03880 DbpA RNA binding domain E5E96_09950 PF00270 DEAD/DEAH box helicase E5E96_09950 PF00271 Helicase conserved C-terminal domain E5E96_09955 PF07670 Nucleoside recognition E5E96_09955 PF07662 Na+ dependent nucleoside transporter C-terminus E5E96_09955 PF01773 Na+ dependent nucleoside transporter N-terminus E5E96_09960 PF04307 LexA-binding, inner membrane-associated putative hydrolase E5E96_09975 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E5E96_09980 PF01544 CorA-like Mg2+ transporter protein E5E96_10000 PF02080 TrkA-C domain E5E96_10000 PF00999 Sodium/hydrogen exchanger family E5E96_10000 PF03471 Transporter associated domain E5E96_10005 PF05068 Mannitol repressor E5E96_10010 PF08125 Mannitol dehydrogenase C-terminal domain E5E96_10010 PF01232 Mannitol dehydrogenase Rossmann domain E5E96_10015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E5E96_10015 PF02378 Phosphotransferase system, EIIC E5E96_10015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E5E96_10025 PF00440 Bacterial regulatory proteins, tetR family E5E96_10030 PF00773 RNB domain E5E96_10030 PF17876 Cold shock domain E5E96_10030 PF08206 Ribonuclease B OB domain E5E96_10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_10035 PF03466 LysR substrate binding domain E5E96_10040 PF00765 Autoinducer synthase E5E96_10045 PF03472 Autoinducer binding domain E5E96_10045 PF00196 Bacterial regulatory proteins, luxR family E5E96_10050 PF01810 LysE type translocator E5E96_10055 PF02872 5'-nucleotidase, C-terminal domain E5E96_10055 PF00149 Calcineurin-like phosphoesterase E5E96_10060 PF05433 Glycine zipper 2TM domain E5E96_10070 PF11756 Nitrous oxide-stimulated promoter E5E96_10075 PF01321 Creatinase/Prolidase N-terminal domain E5E96_10075 PF00557 Metallopeptidase family M24 E5E96_10080 PF00392 Bacterial regulatory proteins, gntR family E5E96_10090 PF01430 Hsp33 protein E5E96_10095 PF01479 S4 domain E5E96_10100 PF11356 Type II secretion system protein C E5E96_10105 PF03958 Bacterial type II/III secretion system short domain E5E96_10105 PF00263 Bacterial type II and III secretion system protein E5E96_10110 PF00437 Type II/IV secretion system protein E5E96_10115 PF00482 Type II secretion system (T2SS), protein F E5E96_10120 PF08334 Type II secretion system (T2SS), protein G E5E96_10120 PF07963 Prokaryotic N-terminal methylation motif E5E96_10130 PF12019 Type II transport protein GspH E5E96_10130 PF07963 Prokaryotic N-terminal methylation motif E5E96_10135 PF07963 Prokaryotic N-terminal methylation motif E5E96_10135 PF02501 Type II secretion system (T2SS), protein I E5E96_10140 PF07963 Prokaryotic N-terminal methylation motif E5E96_10140 PF11612 Type II secretion system (T2SS), protein J E5E96_10155 PF03934 Type II secretion system (T2SS), protein K E5E96_10160 PF12693 GspL periplasmic domain E5E96_10160 PF05134 Type II secretion system (T2SS), protein L E5E96_10165 PF04612 Type II secretion system (T2SS), protein M E5E96_10170 PF01203 Type II secretion system (T2SS), protein N E5E96_10175 PF00196 Bacterial regulatory proteins, luxR family E5E96_10180 PF00579 tRNA synthetases class I (W and Y) E5E96_10180 PF01479 S4 domain E5E96_10185 PF13419 Haloacid dehalogenase-like hydrolase E5E96_10190 PF00293 NUDIX domain E5E96_10195 PF00459 Inositol monophosphatase family E5E96_10200 PF03222 Tryptophan/tyrosine permease family E5E96_10205 PF01588 Putative tRNA binding domain E5E96_10210 PF06445 GyrI-like small molecule binding domain E5E96_10210 PF12833 Helix-turn-helix domain E5E96_10215 PF01340 Met Apo-repressor, MetJ E5E96_10220 PF01053 Cys/Met metabolism PLP-dependent enzyme E5E96_10225 PF00696 Amino acid kinase family E5E96_10225 PF00742 Homoserine dehydrogenase E5E96_10225 PF03447 Homoserine dehydrogenase, NAD binding domain E5E96_10235 PF00311 Phosphoenolpyruvate carboxylase E5E96_10240 PF07687 Peptidase dimerisation domain E5E96_10240 PF01546 Peptidase family M20/M25/M40 E5E96_10245 PF01118 Semialdehyde dehydrogenase, NAD binding domain E5E96_10245 PF02774 Semialdehyde dehydrogenase, dimerisation domain E5E96_10250 PF00696 Amino acid kinase family E5E96_10255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E5E96_10255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E5E96_10260 PF00764 Arginosuccinate synthase E5E96_10265 PF00206 Lyase E5E96_10265 PF14698 Argininosuccinate lyase C-terminal E5E96_10285 PF14602 Hexapeptide repeat of succinyl-transferase E5E96_10285 PF12464 Maltose acetyltransferase E5E96_10290 PF13194 Domain of unknown function (DUF4010) E5E96_10305 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_10310 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_10315 PF00005 ABC transporter E5E96_10315 PF12857 TOBE-like domain E5E96_10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_10320 PF03466 LysR substrate binding domain E5E96_10325 PF18416 N-acetylglucosamine binding protein domain 2 E5E96_10325 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E5E96_10330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_10330 PF00672 HAMP domain E5E96_10330 PF12729 Four helix bundle sensory module for signal transduction E5E96_10365 PF14684 Tricorn protease C1 domain E5E96_10365 PF14685 Tricorn protease PDZ domain E5E96_10365 PF03572 Peptidase family S41 E5E96_10365 PF07676 WD40-like Beta Propeller Repeat E5E96_10385 PF11230 Protein of unknown function (DUF3029) E5E96_10390 PF04055 Radical SAM superfamily E5E96_10400 PF03466 LysR substrate binding domain E5E96_10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_10405 PF00155 Aminotransferase class I and II E5E96_10410 PF02583 Metal-sensitive transcriptional repressor E5E96_10425 PF11852 Domain of unknown function (DUF3372) E5E96_10425 PF17967 Pullulanase N2 domain E5E96_10425 PF18494 Pullulanase Ins domain E5E96_10425 PF03714 Bacterial pullanase-associated domain E5E96_10425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E5E96_10430 PF00403 Heavy-metal-associated domain E5E96_10435 PF08534 Redoxin E5E96_10445 PF00270 DEAD/DEAH box helicase E5E96_10445 PF00271 Helicase conserved C-terminal domain E5E96_10460 PF03372 Endonuclease/Exonuclease/phosphatase family E5E96_10465 PF08447 PAS fold E5E96_10465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_10480 PF06062 Uncharacterised protein family (UPF0231) E5E96_10485 PF05651 Putative sugar diacid recognition E5E96_10485 PF17853 GGDEF-like domain E5E96_10485 PF13556 PucR C-terminal helix-turn-helix domain E5E96_10490 PF02447 GntP family permease E5E96_10495 PF02595 Glycerate kinase family E5E96_10505 PF00255 Glutathione peroxidase E5E96_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_10510 PF03466 LysR substrate binding domain E5E96_10515 PF07670 Nucleoside recognition E5E96_10515 PF07662 Na+ dependent nucleoside transporter C-terminus E5E96_10515 PF01773 Na+ dependent nucleoside transporter N-terminus E5E96_10520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E5E96_10520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E5E96_10525 PF00472 RF-1 domain E5E96_10530 PF00543 Nitrogen regulatory protein P-II E5E96_10535 PF13416 Bacterial extracellular solute-binding protein E5E96_10545 PF08402 TOBE domain E5E96_10545 PF00005 ABC transporter E5E96_10555 PF02863 Arginine repressor, C-terminal domain E5E96_10555 PF01316 Arginine repressor, DNA binding domain E5E96_10565 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_10570 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_10575 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_10580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E5E96_10580 PF00056 lactate/malate dehydrogenase, NAD binding domain E5E96_10585 PF08238 Sel1 repeat E5E96_10590 PF00175 Oxidoreductase NAD-binding domain E5E96_10590 PF00042 Globin E5E96_10590 PF00970 Oxidoreductase FAD-binding domain E5E96_10595 PF02082 Transcriptional regulator E5E96_10600 PF01595 Cyclin M transmembrane N-terminal domain E5E96_10600 PF03471 Transporter associated domain E5E96_10600 PF00571 CBS domain E5E96_10605 PF01578 Cytochrome C assembly protein E5E96_10610 PF02881 SRP54-type protein, helical bundle domain E5E96_10610 PF00448 SRP54-type protein, GTPase domain E5E96_10610 PF02978 Signal peptide binding domain E5E96_10615 PF00886 Ribosomal protein S16 E5E96_10620 PF05239 PRC-barrel domain E5E96_10620 PF01782 RimM N-terminal domain E5E96_10625 PF01746 tRNA (Guanine-1)-methyltransferase E5E96_10630 PF01245 Ribosomal protein L19 E5E96_10640 PF02976 DNA mismatch repair enzyme MutH E5E96_10645 PF00293 NUDIX domain E5E96_10650 PF05524 PEP-utilising enzyme, N-terminal E5E96_10650 PF00391 PEP-utilising enzyme, mobile domain E5E96_10650 PF01590 GAF domain E5E96_10650 PF02896 PEP-utilising enzyme, TIM barrel domain E5E96_10655 PF01790 Prolipoprotein diacylglyceryl transferase E5E96_10660 PF00303 Thymidylate synthase E5E96_10665 PF06965 Na+/H+ antiporter 1 E5E96_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_10675 PF03466 LysR substrate binding domain E5E96_10680 PF01022 Bacterial regulatory protein, arsR family E5E96_10685 PF01649 Ribosomal protein S20 E5E96_10690 PF03023 Lipid II flippase MurJ E5E96_10695 PF01687 Riboflavin kinase E5E96_10695 PF06574 FAD synthetase E5E96_10700 PF08264 Anticodon-binding domain of tRNA E5E96_10700 PF00133 tRNA synthetases class I (I, L, M and V) E5E96_10700 PF06827 Zinc finger found in FPG and IleRS E5E96_10705 PF01252 Signal peptidase (SPase) II E5E96_10710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E5E96_10715 PF02401 LytB protein E5E96_10775 PF00795 Carbon-nitrogen hydrolase E5E96_10775 PF02540 NAD synthase E5E96_10780 PF00543 Nitrogen regulatory protein P-II E5E96_10790 PF02664 S-Ribosylhomocysteinase (LuxS) E5E96_10795 PF00990 Diguanylate cyclase, GGDEF domain E5E96_10800 PF00575 S1 RNA binding domain E5E96_10800 PF17876 Cold shock domain E5E96_10800 PF08461 Ribonuclease R winged-helix domain E5E96_10800 PF08206 Ribonuclease B OB domain E5E96_10800 PF00773 RNB domain E5E96_10805 PF00271 Helicase conserved C-terminal domain E5E96_10810 PF08878 Domain of unknown function (DUF1837) E5E96_10810 PF14130 Domain of unknown function (DUF4297) E5E96_10815 PF08032 RNA 2'-O ribose methyltransferase substrate binding E5E96_10815 PF00588 SpoU rRNA Methylase family E5E96_10825 PF13673 Acetyltransferase (GNAT) domain E5E96_10840 PF02272 DHHA1 domain E5E96_10840 PF01411 tRNA synthetases class II (A) E5E96_10840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E5E96_10845 PF01566 Natural resistance-associated macrophage protein E5E96_10850 PF01250 Ribosomal protein S6 E5E96_10855 PF01084 Ribosomal protein S18 E5E96_10860 PF03948 Ribosomal protein L9, C-terminal domain E5E96_10860 PF01281 Ribosomal protein L9, N-terminal domain E5E96_10865 PF00970 Oxidoreductase FAD-binding domain E5E96_10865 PF00175 Oxidoreductase NAD-binding domain E5E96_10885 PF00698 Acyl transferase domain E5E96_10885 PF08240 Alcohol dehydrogenase GroES-like domain E5E96_10885 PF08659 KR domain E5E96_10885 PF08990 Erythronolide synthase docking E5E96_10885 PF16197 Ketoacyl-synthetase C-terminal extension E5E96_10885 PF00550 Phosphopantetheine attachment site E5E96_10885 PF00109 Beta-ketoacyl synthase, N-terminal domain E5E96_10885 PF02801 Beta-ketoacyl synthase, C-terminal domain E5E96_10885 PF14765 Polyketide synthase dehydratase E5E96_10890 PF09335 SNARE associated Golgi protein E5E96_10895 PF00675 Insulinase (Peptidase family M16) E5E96_10895 PF05193 Peptidase M16 inactive domain E5E96_10900 PF04262 Glutamate-cysteine ligase E5E96_10910 PF00501 AMP-binding enzyme E5E96_10920 PF00583 Acetyltransferase (GNAT) family E5E96_10930 PF07728 AAA domain (dynein-related subfamily) E5E96_10930 PF12592 Protein of unknown function (DUF3763) E5E96_10930 PF17868 AAA lid domain E5E96_10940 PF00563 EAL domain E5E96_10940 PF13188 PAS domain E5E96_10940 PF03707 Bacterial signalling protein N terminal repeat E5E96_10940 PF00990 Diguanylate cyclase, GGDEF domain E5E96_10950 PF00990 Diguanylate cyclase, GGDEF domain E5E96_10950 PF00072 Response regulator receiver domain E5E96_10955 PF16658 Class II release factor RF3, C-terminal domain E5E96_10955 PF03144 Elongation factor Tu domain 2 E5E96_10955 PF00009 Elongation factor Tu GTP binding domain E5E96_10975 PF00583 Acetyltransferase (GNAT) family E5E96_10980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E5E96_10985 PF17754 MftR C-terminal domain E5E96_10985 PF00440 Bacterial regulatory proteins, tetR family E5E96_10990 PF03466 LysR substrate binding domain E5E96_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_10995 PF04371 Porphyromonas-type peptidyl-arginine deiminase E5E96_11000 PF01425 Amidase E5E96_11015 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E5E96_11035 PF00271 Helicase conserved C-terminal domain E5E96_11035 PF00270 DEAD/DEAH box helicase E5E96_11040 PF05643 Putative bacterial lipoprotein (DUF799) E5E96_11050 PF03783 Curli production assembly/transport component CsgG E5E96_11055 PF03466 LysR substrate binding domain E5E96_11055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_11070 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase E5E96_11075 PF00034 Cytochrome c E5E96_11075 PF03150 Di-haem cytochrome c peroxidase E5E96_11090 PF00445 Ribonuclease T2 family E5E96_11100 PF03060 Nitronate monooxygenase E5E96_11130 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain E5E96_11130 PF09297 NADH pyrophosphatase zinc ribbon domain E5E96_11130 PF00293 NUDIX domain E5E96_11135 PF00512 His Kinase A (phospho-acceptor) domain E5E96_11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_11135 PF00672 HAMP domain E5E96_11135 PF16527 Two-component sensor protein CpxA, periplasmic domain E5E96_11140 PF00072 Response regulator receiver domain E5E96_11140 PF00486 Transcriptional regulatory protein, C terminal E5E96_11145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_11150 PF12704 MacB-like periplasmic core domain E5E96_11150 PF02687 FtsX-like permease family E5E96_11150 PF00005 ABC transporter E5E96_11155 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_11160 PF00005 ABC transporter E5E96_11165 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_11170 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_11175 PF00291 Pyridoxal-phosphate dependent enzyme E5E96_11180 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E5E96_11180 PF00326 Prolyl oligopeptidase family E5E96_11205 PF08335 GlnD PII-uridylyltransferase E5E96_11205 PF03710 Glutamate-ammonia ligase adenylyltransferase E5E96_11215 PF00672 HAMP domain E5E96_11215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_11215 PF02743 Cache domain E5E96_11220 PF00027 Cyclic nucleotide-binding domain E5E96_11220 PF00520 Ion transport protein E5E96_11225 PF08239 Bacterial SH3 domain E5E96_11230 PF14850 DNA-binding domain of Proline dehydrogenase E5E96_11230 PF01619 Proline dehydrogenase E5E96_11230 PF00171 Aldehyde dehydrogenase family E5E96_11230 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E5E96_11235 PF09297 NADH pyrophosphatase zinc ribbon domain E5E96_11235 PF00293 NUDIX domain E5E96_11240 PF01208 Uroporphyrinogen decarboxylase (URO-D) E5E96_11245 PF00480 ROK family E5E96_11250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E5E96_11250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E5E96_11255 PF00162 Phosphoglycerate kinase E5E96_11260 PF01116 Fructose-bisphosphate aldolase class-II E5E96_11265 PF01266 FAD dependent oxidoreductase E5E96_11275 PF02683 Cytochrome C biogenesis protein transmembrane region E5E96_11275 PF11412 Disulphide bond corrector protein DsbC E5E96_11280 PF03091 CutA1 divalent ion tolerance protein E5E96_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_11295 PF03466 LysR substrate binding domain E5E96_11300 PF01571 Aminomethyltransferase folate-binding domain E5E96_11305 PF03937 Flavinator of succinate dehydrogenase E5E96_11315 PF02910 Fumarate reductase flavoprotein C-term E5E96_11315 PF00890 FAD binding domain E5E96_11320 PF04542 Sigma-70 region 2 E5E96_11320 PF08281 Sigma-70, region 4 E5E96_11325 PF03873 Anti sigma-E protein RseA, C-terminal domain E5E96_11325 PF03872 Anti sigma-E protein RseA, N-terminal domain E5E96_11330 PF17188 MucB/RseB C-terminal domain E5E96_11330 PF03888 MucB/RseB N-terminal domain E5E96_11340 PF00679 Elongation factor G C-terminus E5E96_11340 PF06421 GTP-binding protein LepA C-terminus E5E96_11340 PF03144 Elongation factor Tu domain 2 E5E96_11340 PF00009 Elongation factor Tu GTP binding domain E5E96_11345 PF10502 Signal peptidase, peptidase S26 E5E96_11350 PF00035 Double-stranded RNA binding motif E5E96_11350 PF14622 Ribonuclease-III-like E5E96_11355 PF01926 50S ribosome-binding GTPase E5E96_11355 PF07650 KH domain E5E96_11360 PF11967 Recombination protein O N terminal E5E96_11360 PF02565 Recombination protein O C terminal E5E96_11365 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E5E96_11375 PF01116 Fructose-bisphosphate aldolase class-II E5E96_11380 PF01979 Amidohydrolase family E5E96_11385 PF03610 PTS system fructose IIA component E5E96_11390 PF03613 PTS system mannose/fructose/sorbose family IID component E5E96_11395 PF03609 PTS system sorbose-specific iic component E5E96_11400 PF03830 PTS system sorbose subfamily IIB component E5E96_11405 PF01380 SIS domain E5E96_11410 PF08013 Tagatose 6 phosphate kinase E5E96_11415 PF08220 DeoR-like helix-turn-helix domain E5E96_11415 PF00455 DeoR C terminal sensor domain E5E96_11420 PF01510 N-acetylmuramoyl-L-alanine amidase E5E96_11425 PF07308 Protein of unknown function (DUF1456) E5E96_11430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_11430 PF01627 Hpt domain E5E96_11430 PF00072 Response regulator receiver domain E5E96_11430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E5E96_11430 PF00672 HAMP domain E5E96_11430 PF00512 His Kinase A (phospho-acceptor) domain E5E96_11435 PF01938 TRAM domain E5E96_11435 PF05958 tRNA (Uracil-5-)-methyltransferase E5E96_11440 PF04607 Region found in RelA / SpoT proteins E5E96_11440 PF13291 ACT domain E5E96_11440 PF02824 TGS domain E5E96_11445 PF03819 MazG nucleotide pyrophosphohydrolase domain E5E96_11450 PF00117 Glutamine amidotransferase class-I E5E96_11450 PF06418 CTP synthase N-terminus E5E96_11455 PF00113 Enolase, C-terminal TIM barrel domain E5E96_11455 PF03952 Enolase, N-terminal domain E5E96_11460 PF04977 Septum formation initiator E5E96_11465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E5E96_11470 PF02542 YgbB family E5E96_11475 PF01142 tRNA pseudouridine synthase D (TruD) E5E96_11480 PF01975 Survival protein SurE E5E96_11490 PF09335 SNARE associated Golgi protein E5E96_11495 PF01476 LysM domain E5E96_11495 PF01551 Peptidase family M23 E5E96_11500 PF04545 Sigma-70, region 4 E5E96_11500 PF04539 Sigma-70 region 3 E5E96_11500 PF04542 Sigma-70 region 2 E5E96_11500 PF00140 Sigma-70 factor, region 1.2 E5E96_11505 PF00814 Glycoprotease family E5E96_11510 PF01165 Ribosomal protein S21 E5E96_11515 PF09424 Yqey-like protein E5E96_11520 PF01807 CHC2 zinc finger E5E96_11520 PF08275 DNA primase catalytic core, N-terminal domain E5E96_11520 PF08278 DNA primase DnaG DnaB-binding E5E96_11520 PF10410 DnaB-helicase binding domain of primase E5E96_11525 PF04546 Sigma-70, non-essential region E5E96_11525 PF04545 Sigma-70, region 4 E5E96_11525 PF03979 Sigma-70 factor, region 1.1 E5E96_11525 PF00140 Sigma-70 factor, region 1.2 E5E96_11525 PF04539 Sigma-70 region 3 E5E96_11525 PF04542 Sigma-70 region 2 E5E96_11535 PF00128 Alpha amylase, catalytic domain E5E96_11550 PF02844 Phosphoribosylglycinamide synthetase, N domain E5E96_11550 PF02843 Phosphoribosylglycinamide synthetase, C domain E5E96_11550 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E5E96_11555 PF02142 MGS-like domain E5E96_11555 PF01808 AICARFT/IMPCHase bienzyme E5E96_11560 PF13411 MerR HTH family regulatory protein E5E96_11565 PF01872 RibD C-terminal domain E5E96_11570 PF03889 Alternative ribosome-rescue factor A E5E96_11575 PF06969 HemN C-terminal domain E5E96_11575 PF04055 Radical SAM superfamily E5E96_11580 PF01725 Ham1 family E5E96_11585 PF07690 Major Facilitator Superfamily E5E96_11590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E5E96_11590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E5E96_11600 PF13302 Acetyltransferase (GNAT) domain E5E96_11605 PF13302 Acetyltransferase (GNAT) domain E5E96_11610 PF07504 Fungalysin/Thermolysin Propeptide Motif E5E96_11610 PF04151 Bacterial pre-peptidase C-terminal domain E5E96_11610 PF02868 Thermolysin metallopeptidase, alpha-helical domain E5E96_11610 PF01447 Thermolysin metallopeptidase, catalytic domain E5E96_11610 PF03413 Peptidase propeptide and YPEB domain E5E96_11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_11615 PF03466 LysR substrate binding domain E5E96_11620 PF07690 Major Facilitator Superfamily E5E96_11625 PF00267 Gram-negative porin E5E96_11630 PF03605 Anaerobic c4-dicarboxylate membrane transporter E5E96_11635 PF10415 Fumarase C C-terminus E5E96_11635 PF00206 Lyase E5E96_11640 PF04186 FxsA cytoplasmic membrane protein E5E96_11645 PF01554 MatE E5E96_11650 PF00166 Chaperonin 10 Kd subunit E5E96_11655 PF00118 TCP-1/cpn60 chaperonin family E5E96_11665 PF00563 EAL domain E5E96_11665 PF13188 PAS domain E5E96_11665 PF03707 Bacterial signalling protein N terminal repeat E5E96_11665 PF00990 Diguanylate cyclase, GGDEF domain E5E96_11675 PF00849 RNA pseudouridylate synthase E5E96_11680 PF00176 SNF2 family N-terminal domain E5E96_11680 PF00271 Helicase conserved C-terminal domain E5E96_11680 PF18337 RapA N-terminal Tudor like domain E5E96_11680 PF12137 RNA polymerase recycling family C-terminal E5E96_11680 PF18339 RapA N-terminal Tudor like domain 1 E5E96_11720 PF13638 PIN domain E5E96_11720 PF02562 PhoH-like protein E5E96_11725 PF00005 ABC transporter E5E96_11730 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_11750 PF00694 Aconitase C-terminal domain E5E96_11755 PF00330 Aconitase family (aconitate hydratase) E5E96_11760 PF00180 Isocitrate/isopropylmalate dehydrogenase E5E96_11765 PF00682 HMGL-like E5E96_11765 PF08502 LeuA allosteric (dimerisation) domain E5E96_11775 PF01569 PAP2 superfamily E5E96_11790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E5E96_11790 PF00205 Thiamine pyrophosphate enzyme, central domain E5E96_11790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E5E96_11795 PF10369 Small subunit of acetolactate synthase E5E96_11800 PF01515 Phosphate acetyl/butaryl transferase E5E96_11800 PF07085 DRTGG domain E5E96_11805 PF00871 Acetokinase family E5E96_11810 PF04217 Protein of unknown function, DUF412 E5E96_11815 PF03887 YfbU domain E5E96_11820 PF00578 AhpC/TSA family E5E96_11825 PF01842 ACT domain E5E96_11830 PF00701 Dihydrodipicolinate synthetase family E5E96_11835 PF06804 NlpB/DapX lipoprotein E5E96_11840 PF01259 SAICAR synthetase E5E96_11850 PF03466 LysR substrate binding domain E5E96_11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_11855 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) E5E96_11875 PF00989 PAS fold E5E96_11875 PF00512 His Kinase A (phospho-acceptor) domain E5E96_11875 PF00072 Response regulator receiver domain E5E96_11875 PF01627 Hpt domain E5E96_11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_11875 PF18415 Histidine kinase receptor ArcB trans-membrane domain E5E96_11880 PF01966 HD domain E5E96_11880 PF13286 Phosphohydrolase-associated domain E5E96_11890 PF00072 Response regulator receiver domain E5E96_11890 PF09456 RcsC Alpha-Beta-Loop (ABL) E5E96_11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_11890 PF00512 His Kinase A (phospho-acceptor) domain E5E96_11895 PF00990 Diguanylate cyclase, GGDEF domain E5E96_11895 PF00563 EAL domain E5E96_11895 PF03707 Bacterial signalling protein N terminal repeat E5E96_11900 PF12729 Four helix bundle sensory module for signal transduction E5E96_11900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_11900 PF00672 HAMP domain E5E96_11920 PF02357 Transcription termination factor nusG E5E96_11925 PF03180 NLPA lipoprotein E5E96_11930 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_11935 PF09383 NIL domain E5E96_11935 PF00005 ABC transporter E5E96_11945 PF00480 ROK family E5E96_11950 PF08331 Domain of unknown function (DUF1730) E5E96_11955 PF03853 YjeF-related protein N-terminus E5E96_11955 PF01256 Carbohydrate kinase E5E96_11960 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E5E96_11965 PF01520 N-acetylmuramoyl-L-alanine amidase E5E96_11970 PF01119 DNA mismatch repair protein, C-terminal domain E5E96_11970 PF08676 MutL C terminal dimerisation domain E5E96_11980 PF17209 Hfq protein E5E96_11985 PF01926 50S ribosome-binding GTPase E5E96_11985 PF16360 GTP-binding GTPase Middle Region E5E96_11985 PF13167 GTP-binding GTPase N-terminal E5E96_11990 PF12221 Bacterial membrane protein N terminal E5E96_11990 PF01145 SPFH domain / Band 7 family E5E96_11995 PF01145 SPFH domain / Band 7 family E5E96_12000 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) E5E96_12005 PF00348 Polyprenyl synthetase E5E96_12010 PF00829 Ribosomal prokaryotic L21 protein E5E96_12015 PF01016 Ribosomal L27 protein E5E96_12020 PF01018 GTP1/OBG E5E96_12020 PF01926 50S ribosome-binding GTPase E5E96_12030 PF13193 AMP-binding enzyme C-terminal domain E5E96_12030 PF00501 AMP-binding enzyme E5E96_12050 PF00296 Luciferase-like monooxygenase E5E96_12060 PF00149 Calcineurin-like phosphoesterase E5E96_12065 PF04379 ApaG domain E5E96_12070 PF00398 Ribosomal RNA adenine dimethylase E5E96_12075 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E5E96_12080 PF00639 PPIC-type PPIASE domain E5E96_12080 PF09312 SurA N-terminal domain E5E96_12085 PF03968 OstA-like protein E5E96_12085 PF04453 LPS transport system D E5E96_12090 PF01636 Phosphotransferase enzyme family E5E96_12095 PF00483 Nucleotidyl transferase E5E96_12100 PF00226 DnaJ domain E5E96_12100 PF05099 Tellurite resistance protein TerB E5E96_12105 PF00860 Permease family E5E96_12115 PF00005 ABC transporter E5E96_12115 PF12848 ABC transporter E5E96_12130 PF01048 Phosphorylase superfamily E5E96_12135 PF01464 Transglycosylase SLT domain E5E96_12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_12150 PF03466 LysR substrate binding domain E5E96_12155 PF01048 Phosphorylase superfamily E5E96_12160 PF01773 Na+ dependent nucleoside transporter N-terminus E5E96_12160 PF07670 Nucleoside recognition E5E96_12160 PF07662 Na+ dependent nucleoside transporter C-terminus E5E96_12165 PF01791 DeoC/LacD family aldolase E5E96_12175 PF01370 NAD dependent epimerase/dehydratase family E5E96_12185 PF00005 ABC transporter E5E96_12190 PF01032 FecCD transport family E5E96_12200 PF06228 Haem utilisation ChuX/HutX E5E96_12205 PF01243 Pyridoxamine 5'-phosphate oxidase E5E96_12225 PF07715 TonB-dependent Receptor Plug Domain E5E96_12225 PF00593 TonB dependent receptor E5E96_12235 PF12832 MFS_1 like family E5E96_12240 PF13443 Cro/C1-type HTH DNA-binding domain E5E96_12250 PF00989 PAS fold E5E96_12250 PF00512 His Kinase A (phospho-acceptor) domain E5E96_12250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_12255 PF08329 Chitinase A, N-terminal domain E5E96_12255 PF00704 Glycosyl hydrolases family 18 E5E96_12260 PF12561 ToxR activated gene A lipoprotein domain E5E96_12260 PF17945 Beta/Gamma crystallin E5E96_12265 PF18416 N-acetylglucosamine binding protein domain 2 E5E96_12265 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E5E96_12270 PF13847 Methyltransferase domain E5E96_12275 PF00027 Cyclic nucleotide-binding domain E5E96_12275 PF13545 Crp-like helix-turn-helix domain E5E96_12280 PF02566 OsmC-like protein E5E96_12295 PF00485 Phosphoribulokinase / Uridine kinase family E5E96_12300 PF00893 Small Multidrug Resistance protein E5E96_12305 PF00892 EamA-like transporter family E5E96_12310 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase E5E96_12315 PF01522 Polysaccharide deacetylase E5E96_12320 PF02911 Formyl transferase, C-terminal domain E5E96_12320 PF00551 Formyl transferase E5E96_12320 PF01370 NAD dependent epimerase/dehydratase family E5E96_12325 PF00535 Glycosyl transferase family 2 E5E96_12330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E5E96_12335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E5E96_12335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E5E96_12335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E5E96_12340 PF06794 Uncharacterised protein family (UPF0270) E5E96_12345 PF00563 EAL domain E5E96_12345 PF01590 GAF domain E5E96_12345 PF00360 Phytochrome region E5E96_12345 PF00990 Diguanylate cyclase, GGDEF domain E5E96_12350 PF00561 alpha/beta hydrolase fold E5E96_12355 PF01584 CheW-like domain E5E96_12355 PF00072 Response regulator receiver domain E5E96_12365 PF09526 Probable metal-binding protein (DUF2387) E5E96_12370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E5E96_12375 PF04102 SlyX E5E96_12385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E5E96_12385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E5E96_12390 PF02954 Bacterial regulatory protein, Fis family E5E96_12390 PF00072 Response regulator receiver domain E5E96_12390 PF00158 Sigma-54 interaction domain E5E96_12410 PF00149 Calcineurin-like phosphoesterase E5E96_12410 PF02872 5'-nucleotidase, C-terminal domain E5E96_12415 PF00563 EAL domain E5E96_12415 PF12792 CSS motif domain associated with EAL E5E96_12430 PF00772 DnaB-like helicase N terminal domain E5E96_12430 PF03796 DnaB-like helicase C terminal domain E5E96_12435 PF00772 DnaB-like helicase N terminal domain E5E96_12435 PF03796 DnaB-like helicase C terminal domain E5E96_12440 PF01168 Alanine racemase, N-terminal domain E5E96_12440 PF00842 Alanine racemase, C-terminal domain E5E96_12450 PF12838 4Fe-4S dicluster domain E5E96_12460 PF00989 PAS fold E5E96_12460 PF00990 Diguanylate cyclase, GGDEF domain E5E96_12460 PF01590 GAF domain E5E96_12460 PF00563 EAL domain E5E96_12485 PF00266 Aminotransferase class-V E5E96_12490 PF00072 Response regulator receiver domain E5E96_12490 PF01339 CheB methylesterase E5E96_12495 PF03975 CheD chemotactic sensory transduction E5E96_12500 PF03705 CheR methyltransferase, all-alpha domain E5E96_12500 PF01739 CheR methyltransferase, SAM binding domain E5E96_12505 PF00672 HAMP domain E5E96_12505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_12505 PF02203 Tar ligand binding domain homologue E5E96_12510 PF01584 CheW-like domain E5E96_12515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_12515 PF00672 HAMP domain E5E96_12515 PF12729 Four helix bundle sensory module for signal transduction E5E96_12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_12520 PF07194 P2 response regulator binding domain E5E96_12520 PF01584 CheW-like domain E5E96_12520 PF01627 Hpt domain E5E96_12520 PF02895 Signal transducing histidine kinase, homodimeric domain E5E96_12530 PF00072 Response regulator receiver domain E5E96_12535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_12535 PF02743 Cache domain E5E96_12535 PF00672 HAMP domain E5E96_12545 PF03466 LysR substrate binding domain E5E96_12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_12550 PF01810 LysE type translocator E5E96_12555 PF12392 Collagenase E5E96_12555 PF01136 Peptidase family U32 E5E96_12570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E5E96_12570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E5E96_12575 PF06029 AlkA N-terminal domain E5E96_12575 PF00730 HhH-GPD superfamily base excision DNA repair protein E5E96_12575 PF02805 Metal binding domain of Ada E5E96_12575 PF12833 Helix-turn-helix domain E5E96_12585 PF02074 Carboxypeptidase Taq (M32) metallopeptidase E5E96_12610 PF00106 short chain dehydrogenase E5E96_12615 PF03573 outer membrane porin, OprD family E5E96_12620 PF02743 Cache domain E5E96_12620 PF00672 HAMP domain E5E96_12620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_12630 PF00596 Class II Aldolase and Adducin N-terminal domain E5E96_12635 PF00465 Iron-containing alcohol dehydrogenase E5E96_12640 PF02311 AraC-like ligand binding domain E5E96_12640 PF12833 Helix-turn-helix domain E5E96_12650 PF06134 L-rhamnose isomerase (RhaA) E5E96_12655 PF06379 L-rhamnose-proton symport protein (RhaT) E5E96_12660 PF05336 L-rhamnose mutarotase E5E96_12710 PF04002 RadC-like JAB domain E5E96_12755 PF09588 YqaJ-like viral recombinase domain E5E96_12785 PF00800 Prephenate dehydratase E5E96_12785 PF01817 Chorismate mutase type II E5E96_12815 PF08349 Protein of unknown function (DUF1722) E5E96_12820 PF13411 MerR HTH family regulatory protein E5E96_12825 PF03441 FAD binding domain of DNA photolyase E5E96_12825 PF00875 DNA photolyase E5E96_12835 PF00106 short chain dehydrogenase E5E96_12875 PF00210 Ferritin-like domain E5E96_12880 PF03063 Prismane/CO dehydrogenase family E5E96_12885 PF00175 Oxidoreductase NAD-binding domain E5E96_12885 PF00970 Oxidoreductase FAD-binding domain E5E96_12885 PF00042 Globin E5E96_12890 PF16363 GDP-mannose 4,6 dehydratase E5E96_12895 PF06965 Na+/H+ antiporter 1 E5E96_12895 PF13462 Thioredoxin E5E96_12915 PF02463 RecF/RecN/SMC N terminal domain E5E96_13050 PF05930 Prophage CP4-57 regulatory protein (AlpA) E5E96_13065 PF05638 Type VI secretion system effector, Hcp E5E96_13070 PF04717 Type VI secretion system, phage-baseplate injector E5E96_13110 PF00196 Bacterial regulatory proteins, luxR family E5E96_13110 PF03472 Autoinducer binding domain E5E96_13115 PF05638 Type VI secretion system effector, Hcp E5E96_13155 PF03466 LysR substrate binding domain E5E96_13155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_13160 PF03306 Alpha-acetolactate decarboxylase E5E96_13165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E5E96_13165 PF00205 Thiamine pyrophosphate enzyme, central domain E5E96_13165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E5E96_13170 PF01965 DJ-1/PfpI family E5E96_13175 PF08546 Ketopantoate reductase PanE/ApbA C terminal E5E96_13175 PF02558 Ketopantoate reductase PanE/ApbA E5E96_13180 PF04461 Protein of unknown function (DUF520) E5E96_13185 PF03502 Nucleoside-specific channel-forming protein, Tsx E5E96_13190 PF07690 Major Facilitator Superfamily E5E96_13200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E5E96_13210 PF05175 Methyltransferase small domain E5E96_13215 PF01722 BolA-like protein E5E96_13220 PF11973 NQRA C-terminal domain E5E96_13220 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) E5E96_13225 PF03116 NQR2, RnfD, RnfE family E5E96_13230 PF04205 FMN-binding domain E5E96_13235 PF02508 Rnf-Nqr subunit, membrane protein E5E96_13240 PF02508 Rnf-Nqr subunit, membrane protein E5E96_13245 PF00111 2Fe-2S iron-sulfur cluster binding domain E5E96_13245 PF00175 Oxidoreductase NAD-binding domain E5E96_13245 PF00970 Oxidoreductase FAD-binding domain E5E96_13250 PF02424 ApbE family E5E96_13265 PF00817 impB/mucB/samB family E5E96_13265 PF11799 impB/mucB/samB family C-terminal domain E5E96_13265 PF11798 IMS family HHH motif E5E96_13270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_13270 PF00672 HAMP domain E5E96_13275 PF03466 LysR substrate binding domain E5E96_13275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_13285 PF04241 Protein of unknown function (DUF423) E5E96_13290 PF01728 FtsJ-like methyltransferase E5E96_13290 PF18125 RlmM ferredoxin-like domain E5E96_13300 PF18324 Hypothetical protein TT1725 E5E96_13300 PF00180 Isocitrate/isopropylmalate dehydrogenase E5E96_13305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E5E96_13305 PF01367 5'-3' exonuclease, C-terminal SAM fold E5E96_13310 PF11892 Domain of unknown function (DUF3412) E5E96_13310 PF03641 Possible lysine decarboxylase E5E96_13310 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases E5E96_13315 PF07694 5TMR of 5TMR-LYT E5E96_13315 PF00990 Diguanylate cyclase, GGDEF domain E5E96_13325 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term E5E96_13325 PF14489 QueF-like protein E5E96_13330 PF07348 Syd protein (SUKH-2) E5E96_13335 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) E5E96_13360 PF04287 tRNA pseudouridine synthase C E5E96_13365 PF00849 RNA pseudouridylate synthase E5E96_13370 PF00258 Flavodoxin E5E96_13375 PF02264 LamB porin E5E96_13380 PF07148 Maltose operon periplasmic protein precursor (MalM) E5E96_13385 PF02378 Phosphotransferase system, EIIC E5E96_13385 PF00367 phosphotransferase system, EIIB E5E96_13390 PF11944 Protein of unknown function (DUF3461) E5E96_13395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E5E96_13395 PF14602 Hexapeptide repeat of succinyl-transferase E5E96_13395 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_13400 PF01842 ACT domain E5E96_13400 PF08335 GlnD PII-uridylyltransferase E5E96_13400 PF01909 Nucleotidyltransferase domain E5E96_13400 PF01966 HD domain E5E96_13405 PF00557 Metallopeptidase family M24 E5E96_13410 PF00318 Ribosomal protein S2 E5E96_13415 PF00889 Elongation factor TS E5E96_13420 PF00696 Amino acid kinase family E5E96_13425 PF01765 Ribosome recycling factor E5E96_13430 PF01255 Putative undecaprenyl diphosphate synthase E5E96_13440 PF13288 DXP reductoisomerase C-terminal domain E5E96_13440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E5E96_13440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E5E96_13445 PF02163 Peptidase family M50 E5E96_13445 PF17820 PDZ domain E5E96_13450 PF07244 Surface antigen variable number repeat E5E96_13450 PF01103 Surface antigen E5E96_13455 PF03938 Outer membrane protein (OmpH-like) E5E96_13460 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E5E96_13460 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_13465 PF07977 FabA-like domain E5E96_13470 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E5E96_13470 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_13475 PF02684 Lipid-A-disaccharide synthetase E5E96_13480 PF01351 Ribonuclease HII E5E96_13485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E5E96_13485 PF02811 PHP domain E5E96_13485 PF01336 OB-fold nucleic acid binding domain E5E96_13485 PF14579 Helix-hairpin-helix motif E5E96_13485 PF07733 Bacterial DNA polymerase III alpha NTPase domain E5E96_13490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E5E96_13495 PF18500 CadC C-terminal domain 1 E5E96_13495 PF00486 Transcriptional regulatory protein, C terminal E5E96_13500 PF13520 Amino acid permease E5E96_13505 PF01276 Orn/Lys/Arg decarboxylase, major domain E5E96_13505 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E5E96_13505 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E5E96_13510 PF08543 Phosphomethylpyrimidine kinase E5E96_13520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_13520 PF03466 LysR substrate binding domain E5E96_13535 PF12706 Beta-lactamase superfamily domain E5E96_13540 PF03466 LysR substrate binding domain E5E96_13540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_13545 PF12146 Serine aminopeptidase, S33 E5E96_13550 PF12146 Serine aminopeptidase, S33 E5E96_13555 PF03466 LysR substrate binding domain E5E96_13555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_13560 PF13520 Amino acid permease E5E96_13570 PF00005 ABC transporter E5E96_13570 PF16326 ABC transporter C-terminal domain E5E96_13570 PF12848 ABC transporter E5E96_13580 PF01431 Peptidase family M13 E5E96_13580 PF05649 Peptidase family M13 E5E96_13585 PF11734 TilS substrate C-terminal domain E5E96_13585 PF09179 TilS substrate binding domain E5E96_13585 PF01171 PP-loop family E5E96_13590 PF00990 Diguanylate cyclase, GGDEF domain E5E96_13595 PF00999 Sodium/hydrogen exchanger family E5E96_13595 PF02080 TrkA-C domain E5E96_13595 PF02254 TrkA-N domain E5E96_13615 PF00072 Response regulator receiver domain E5E96_13615 PF00196 Bacterial regulatory proteins, luxR family E5E96_13625 PF00128 Alpha amylase, catalytic domain E5E96_13640 PF00535 Glycosyl transferase family 2 E5E96_13655 PF03734 L,D-transpeptidase catalytic domain E5E96_13655 PF01471 Putative peptidoglycan binding domain E5E96_13660 PF05951 Bacterial protein of unknown function (DUF882) E5E96_13670 PF03458 UPF0126 domain E5E96_13685 PF04354 ZipA, C-terminal FtsZ-binding domain E5E96_13690 PF12826 Helix-hairpin-helix motif E5E96_13690 PF01653 NAD-dependent DNA ligase adenylation domain E5E96_13690 PF00533 BRCA1 C Terminus (BRCT) domain E5E96_13690 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E5E96_13690 PF03120 NAD-dependent DNA ligase OB-fold domain E5E96_13700 PF13597 Anaerobic ribonucleoside-triphosphate reductase E5E96_13700 PF03477 ATP cone domain E5E96_13710 PF01679 Proteolipid membrane potential modulator E5E96_13735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_13735 PF00529 HlyD membrane-fusion protein of T1SS E5E96_13740 PF01047 MarR family E5E96_13750 PF03390 2-hydroxycarboxylate transporter family E5E96_13755 PF00390 Malic enzyme, N-terminal domain E5E96_13755 PF03949 Malic enzyme, NAD binding domain E5E96_13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_13760 PF00989 PAS fold E5E96_13760 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E5E96_13760 PF17203 Single cache domain 3 E5E96_13765 PF00072 Response regulator receiver domain E5E96_13765 PF12431 Transcriptional regulator E5E96_13770 PF00892 EamA-like transporter family E5E96_13780 PF00171 Aldehyde dehydrogenase family E5E96_13785 PF02954 Bacterial regulatory protein, Fis family E5E96_13785 PF01590 GAF domain E5E96_13785 PF00158 Sigma-54 interaction domain E5E96_13790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E5E96_13790 PF02770 Acyl-CoA dehydrogenase, middle domain E5E96_13790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E5E96_13795 PF02515 CoA-transferase family III E5E96_13800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E5E96_13805 PF00072 Response regulator receiver domain E5E96_13805 PF00486 Transcriptional regulatory protein, C terminal E5E96_13810 PF00989 PAS fold E5E96_13810 PF11808 Phosphate regulon sensor protein PhoR E5E96_13810 PF00512 His Kinase A (phospho-acceptor) domain E5E96_13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_13815 PF12849 PBP superfamily domain E5E96_13820 PF01435 Peptidase family M48 E5E96_13835 PF03932 CutC family E5E96_13845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E5E96_13845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E5E96_13850 PF00005 ABC transporter E5E96_13870 PF00293 NUDIX domain E5E96_13880 PF00462 Glutaredoxin E5E96_13880 PF08534 Redoxin E5E96_13885 PF01699 Sodium/calcium exchanger protein E5E96_13890 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E5E96_13890 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E5E96_13895 PF01235 Sodium:alanine symporter family E5E96_13905 PF00860 Permease family E5E96_13910 PF00990 Diguanylate cyclase, GGDEF domain E5E96_13910 PF00072 Response regulator receiver domain E5E96_13915 PF10692 Protein of unknown function (DUF2498) E5E96_13920 PF01554 MatE E5E96_13925 PF12833 Helix-turn-helix domain E5E96_13930 PF03949 Malic enzyme, NAD binding domain E5E96_13930 PF00390 Malic enzyme, N-terminal domain E5E96_13935 PF00691 OmpA family E5E96_13935 PF01389 OmpA-like transmembrane domain E5E96_13940 PF00691 OmpA family E5E96_13940 PF01389 OmpA-like transmembrane domain E5E96_13945 PF00691 OmpA family E5E96_13945 PF01389 OmpA-like transmembrane domain E5E96_13960 PF00209 Sodium:neurotransmitter symporter family E5E96_13965 PF01734 Patatin-like phospholipase E5E96_13970 PF00990 Diguanylate cyclase, GGDEF domain E5E96_13975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_13975 PF00529 HlyD membrane-fusion protein of T1SS E5E96_13980 PF00873 AcrB/AcrD/AcrF family E5E96_13990 PF11842 Domain of unknown function (DUF3362) E5E96_13990 PF04055 Radical SAM superfamily E5E96_13990 PF08497 Radical SAM N-terminal E5E96_13995 PF07693 KAP family P-loop domain E5E96_14015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E5E96_14025 PF02075 Crossover junction endodeoxyribonuclease RuvC E5E96_14030 PF00230 Major intrinsic protein E5E96_14035 PF01464 Transglycosylase SLT domain E5E96_14035 PF01551 Peptidase family M23 E5E96_14035 PF10145 Phage-related minor tail protein E5E96_14040 PF00128 Alpha amylase, catalytic domain E5E96_14045 PF01551 Peptidase family M23 E5E96_14060 PF13091 PLD-like domain E5E96_14060 PF13396 Phospholipase_D-nuclease N-terminal E5E96_14070 PF00551 Formyl transferase E5E96_14070 PF01842 ACT domain E5E96_14075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E5E96_14085 PF00085 Thioredoxin E5E96_14090 PF01648 4'-phosphopantetheinyl transferase superfamily E5E96_14095 PF00877 NlpC/P60 family E5E96_14100 PF05971 RNA methyltransferase E5E96_14105 PF01575 MaoC like domain E5E96_14115 PF01476 LysM domain E5E96_14115 PF03734 L,D-transpeptidase catalytic domain E5E96_14115 PF17969 L,D-transpeptidase C-terminal domain E5E96_14125 PF00893 Small Multidrug Resistance protein E5E96_14130 PF00893 Small Multidrug Resistance protein E5E96_14140 PF06130 Phosphate propanoyltransferase E5E96_14145 PF00936 BMC domain E5E96_14150 PF13187 4Fe-4S dicluster domain E5E96_14150 PF04055 Radical SAM superfamily E5E96_14155 PF01228 Glycine radical E5E96_14155 PF02901 Pyruvate formate lyase-like E5E96_14160 PF00171 Aldehyde dehydrogenase family E5E96_14160 PF00465 Iron-containing alcohol dehydrogenase E5E96_14170 PF00171 Aldehyde dehydrogenase family E5E96_14170 PF00465 Iron-containing alcohol dehydrogenase E5E96_14175 PF00936 BMC domain E5E96_14180 PF00936 BMC domain E5E96_14185 PF00936 BMC domain E5E96_14205 PF03466 LysR substrate binding domain E5E96_14205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_14210 PF02634 FdhD/NarQ family E5E96_14215 PF00384 Molybdopterin oxidoreductase E5E96_14230 PF00440 Bacterial regulatory proteins, tetR family E5E96_14235 PF02770 Acyl-CoA dehydrogenase, middle domain E5E96_14235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E5E96_14235 PF09317 Domain of unknown function (DUF1974) E5E96_14235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E5E96_14240 PF00873 AcrB/AcrD/AcrF family E5E96_14250 PF02887 Pyruvate kinase, alpha/beta domain E5E96_14250 PF00224 Pyruvate kinase, barrel domain E5E96_14255 PF01418 Helix-turn-helix domain, rpiR family E5E96_14255 PF01380 SIS domain E5E96_14260 PF02685 Glucokinase E5E96_14270 PF00486 Transcriptional regulatory protein, C terminal E5E96_14270 PF00072 Response regulator receiver domain E5E96_14275 PF04055 Radical SAM superfamily E5E96_14275 PF00919 Uncharacterized protein family UPF0004 E5E96_14275 PF18693 TRAM domain E5E96_14280 PF00072 Response regulator receiver domain E5E96_14290 PF02049 Flagellar hook-basal body complex protein FliE E5E96_14295 PF01514 Secretory protein of YscJ/FliF family E5E96_14295 PF08345 Flagellar M-ring protein C-terminal E5E96_14300 PF14842 FliG N-terminal domain E5E96_14300 PF14841 FliG middle domain E5E96_14300 PF01706 FliG C-terminal domain E5E96_14310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E5E96_14310 PF18269 T3SS EscN ATPase C-terminal domain E5E96_14330 PF02154 Flagellar motor switch protein FliM E5E96_14330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E5E96_14335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E5E96_14340 PF04347 Flagellar biosynthesis protein, FliO E5E96_14345 PF00813 FliP family E5E96_14350 PF01313 Bacterial export proteins, family 3 E5E96_14355 PF01311 Bacterial export proteins, family 1 E5E96_14360 PF01312 FlhB HrpN YscU SpaS Family E5E96_14365 PF00771 FHIPEP family E5E96_14370 PF00448 SRP54-type protein, GTPase domain E5E96_14375 PF10609 NUBPL iron-transfer P-loop NTPase E5E96_14380 PF04539 Sigma-70 region 3 E5E96_14380 PF04542 Sigma-70 region 2 E5E96_14380 PF04545 Sigma-70, region 4 E5E96_14385 PF00072 Response regulator receiver domain E5E96_14390 PF04344 Chemotaxis phosphatase, CheZ E5E96_14395 PF01584 CheW-like domain E5E96_14395 PF00072 Response regulator receiver domain E5E96_14395 PF02895 Signal transducing histidine kinase, homodimeric domain E5E96_14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_14395 PF01627 Hpt domain E5E96_14400 PF00072 Response regulator receiver domain E5E96_14400 PF01339 CheB methylesterase E5E96_14405 PF01618 MotA/TolQ/ExbB proton channel family E5E96_14410 PF13677 Membrane MotB of proton-channel complex MotA/MotB E5E96_14410 PF00691 OmpA family E5E96_14415 PF13614 AAA domain E5E96_14425 PF01584 CheW-like domain E5E96_14435 PF00005 ABC transporter E5E96_14440 PF03379 CcmB protein E5E96_14445 PF01578 Cytochrome C assembly protein E5E96_14450 PF04995 Heme exporter protein D (CcmD) E5E96_14455 PF03100 CcmE E5E96_14460 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E5E96_14460 PF01578 Cytochrome C assembly protein E5E96_14465 PF08534 Redoxin E5E96_14470 PF03918 Cytochrome C biogenesis protein E5E96_14475 PF03918 Cytochrome C biogenesis protein E5E96_14480 PF04333 MlaA lipoprotein E5E96_14485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E5E96_14485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E5E96_14490 PF00462 Glutaredoxin E5E96_14495 PF01029 NusB family E5E96_14495 PF01189 16S rRNA methyltransferase RsmB/F E5E96_14510 PF01243 Pyridoxamine 5'-phosphate oxidase E5E96_14510 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E5E96_14515 PF02798 Glutathione S-transferase, N-terminal domain E5E96_14525 PF13508 Acetyltransferase (GNAT) domain E5E96_14535 PF08007 Cupin superfamily protein E5E96_14540 PF00206 Lyase E5E96_14540 PF08328 Adenylosuccinate lyase C-terminal E5E96_14545 PF04356 Protein of unknown function (DUF489) E5E96_14555 PF00293 NUDIX domain E5E96_14560 PF00849 RNA pseudouridylate synthase E5E96_14570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E5E96_14580 PF07690 Major Facilitator Superfamily E5E96_14590 PF09013 YopH, N-terminal E5E96_14595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E5E96_14595 PF02378 Phosphotransferase system, EIIC E5E96_14595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E5E96_14625 PF00583 Acetyltransferase (GNAT) family E5E96_14635 PF13411 MerR HTH family regulatory protein E5E96_14640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E5E96_14640 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_14645 PF00356 Bacterial regulatory proteins, lacI family E5E96_14645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E5E96_14650 PF00367 phosphotransferase system, EIIB E5E96_14650 PF02378 Phosphotransferase system, EIIC E5E96_14655 PF00155 Aminotransferase class I and II E5E96_14685 PF01238 Phosphomannose isomerase type I E5E96_14690 PF12833 Helix-turn-helix domain E5E96_14695 PF00180 Isocitrate/isopropylmalate dehydrogenase E5E96_14705 PF00291 Pyridoxal-phosphate dependent enzyme E5E96_14710 PF02447 GntP family permease E5E96_14715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_14715 PF03466 LysR substrate binding domain E5E96_14725 PF04320 Protein with unknown function (DUF469) E5E96_14730 PF01420 Type I restriction modification DNA specificity domain E5E96_14735 PF02384 N-6 DNA Methylase E5E96_14740 PF04851 Type III restriction enzyme, res subunit E5E96_14740 PF08463 EcoEI R protein C-terminal E5E96_14740 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E5E96_14740 PF00271 Helicase conserved C-terminal domain E5E96_14745 PF14338 Mrr N-terminal domain E5E96_14745 PF04471 Restriction endonuclease E5E96_14755 PF01668 SmpB protein E5E96_14760 PF03364 Polyketide cyclase / dehydrase and lipid transport E5E96_14770 PF13460 NAD(P)H-binding E5E96_14775 PF04355 SmpA / OmlA family E5E96_14780 PF00465 Iron-containing alcohol dehydrogenase E5E96_14785 PF01048 Phosphorylase superfamily E5E96_14790 PF00849 RNA pseudouridylate synthase E5E96_14795 PF01156 Inosine-uridine preferring nucleoside hydrolase E5E96_14810 PF07509 Protein of unknown function (DUF1523) E5E96_14815 PF00672 HAMP domain E5E96_14815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_14820 PF01810 LysE type translocator E5E96_14830 PF03471 Transporter associated domain E5E96_14830 PF00999 Sodium/hydrogen exchanger family E5E96_14830 PF02080 TrkA-C domain E5E96_14840 PF02080 TrkA-C domain E5E96_14840 PF03471 Transporter associated domain E5E96_14840 PF00999 Sodium/hydrogen exchanger family E5E96_14850 PF02557 D-alanyl-D-alanine carboxypeptidase E5E96_14855 PF01546 Peptidase family M20/M25/M40 E5E96_14855 PF07687 Peptidase dimerisation domain E5E96_14860 PF03960 ArsC family E5E96_14875 PF03606 C4-dicarboxylate anaerobic carrier E5E96_14880 PF07687 Peptidase dimerisation domain E5E96_14880 PF01546 Peptidase family M20/M25/M40 E5E96_14890 PF03605 Anaerobic c4-dicarboxylate membrane transporter E5E96_14895 PF01336 OB-fold nucleic acid binding domain E5E96_14895 PF00152 tRNA synthetases class II (D, K and N) E5E96_14910 PF00202 Aminotransferase class-III E5E96_14915 PF06968 Biotin and Thiamin Synthesis associated domain E5E96_14915 PF04055 Radical SAM superfamily E5E96_14920 PF00155 Aminotransferase class I and II E5E96_14925 PF12697 Alpha/beta hydrolase family E5E96_14925 PF08241 Methyltransferase domain E5E96_14935 PF01435 Peptidase family M48 E5E96_14940 PF13426 PAS domain E5E96_14940 PF08447 PAS fold E5E96_14940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_14945 PF00111 2Fe-2S iron-sulfur cluster binding domain E5E96_14945 PF03476 MOSC N-terminal beta barrel domain E5E96_14945 PF00111 2Fe-2S iron-sulfur cluster binding domain E5E96_14945 PF03473 MOSC domain E5E96_14945 PF03476 MOSC N-terminal beta barrel domain E5E96_14945 PF03473 MOSC domain E5E96_14950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E5E96_14950 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E5E96_14950 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_14975 PF01554 MatE E5E96_15015 PF00440 Bacterial regulatory proteins, tetR family E5E96_15015 PF08359 YsiA-like protein, C-terminal region E5E96_15020 PF00171 Aldehyde dehydrogenase family E5E96_15030 PF00877 NlpC/P60 family E5E96_15035 PF07968 Leukocidin/Hemolysin toxin family E5E96_15035 PF12563 Hemolytic toxin N terminal E5E96_15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_15040 PF03466 LysR substrate binding domain E5E96_15045 PF10417 C-terminal domain of 1-Cys peroxiredoxin E5E96_15045 PF00578 AhpC/TSA family E5E96_15065 PF08003 Protein of unknown function (DUF1698) E5E96_15070 PF13649 Methyltransferase domain E5E96_15075 PF01904 Protein of unknown function DUF72 E5E96_15080 PF02938 GAD domain E5E96_15080 PF00152 tRNA synthetases class II (D, K and N) E5E96_15080 PF01336 OB-fold nucleic acid binding domain E5E96_15085 PF01709 Transcriptional regulator E5E96_15090 PF00884 Sulfatase E5E96_15090 PF08019 Phosphoethanolamine transferase EptA/EptB E5E96_15095 PF00480 ROK family E5E96_15095 PF01047 MarR family E5E96_15100 PF01979 Amidohydrolase family E5E96_15105 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E5E96_15110 PF02378 Phosphotransferase system, EIIC E5E96_15110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E5E96_15110 PF00367 phosphotransferase system, EIIB E5E96_15115 PF00728 Glycosyl hydrolase family 20, catalytic domain E5E96_15115 PF02838 Glycosyl hydrolase family 20, domain 2 E5E96_15115 PF03173 Putative carbohydrate binding domain E5E96_15115 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain E5E96_15125 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain E5E96_15125 PF00749 tRNA synthetases class I (E and Q), catalytic domain E5E96_15130 PF01475 Ferric uptake regulator family E5E96_15140 PF00258 Flavodoxin E5E96_15145 PF01402 Ribbon-helix-helix protein, copG family E5E96_15160 PF03925 SeqA protein C-terminal domain E5E96_15160 PF17206 SeqA protein N-terminal domain E5E96_15165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E5E96_15165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E5E96_15165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E5E96_15165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E5E96_15175 PF01047 MarR family E5E96_15190 PF13406 Transglycosylase SLT domain E5E96_15195 PF01066 CDP-alcohol phosphatidyltransferase E5E96_15200 PF00005 ABC transporter E5E96_15215 PF00403 Heavy-metal-associated domain E5E96_15215 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_15215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E5E96_15220 PF02627 Carboxymuconolactone decarboxylase family E5E96_15230 PF01625 Peptide methionine sulfoxide reductase E5E96_15245 PF07244 Surface antigen variable number repeat E5E96_15245 PF17243 POTRA domain TamA domain 1 E5E96_15245 PF01103 Surface antigen E5E96_15250 PF04357 TamB, inner membrane protein subunit of TAM complex E5E96_15270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E5E96_15275 PF00990 Diguanylate cyclase, GGDEF domain E5E96_15275 PF03707 Bacterial signalling protein N terminal repeat E5E96_15275 PF00563 EAL domain E5E96_15280 PF01464 Transglycosylase SLT domain E5E96_15280 PF14718 Soluble lytic murein transglycosylase L domain E5E96_15285 PF00356 Bacterial regulatory proteins, lacI family E5E96_15295 PF03061 Thioesterase superfamily E5E96_15305 PF03372 Endonuclease/Exonuclease/phosphatase family E5E96_15310 PF01464 Transglycosylase SLT domain E5E96_15310 PF01476 LysM domain E5E96_15315 PF00753 Metallo-beta-lactamase superfamily E5E96_15315 PF16123 Hydroxyacylglutathione hydrolase C-terminus E5E96_15320 PF08241 Methyltransferase domain E5E96_15325 PF00075 RNase H E5E96_15330 PF00929 Exonuclease E5E96_15340 PF02541 Ppx/GppA phosphatase family E5E96_15345 PF13089 Polyphosphate kinase N-terminal domain E5E96_15345 PF13090 Polyphosphate kinase C-terminal domain 2 E5E96_15345 PF02503 Polyphosphate kinase middle domain E5E96_15345 PF17941 Polyphosphate kinase C-terminal domain 1 E5E96_15350 PF01842 ACT domain E5E96_15360 PF02954 Bacterial regulatory protein, Fis family E5E96_15360 PF00158 Sigma-54 interaction domain E5E96_15360 PF06490 Flagellar regulatory protein FleQ E5E96_15365 PF00989 PAS fold E5E96_15365 PF00512 His Kinase A (phospho-acceptor) domain E5E96_15365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_15375 PF01784 NIF3 (NGG1p interacting factor 3) E5E96_15380 PF00551 Formyl transferase E5E96_15385 PF00586 AIR synthase related protein, N-terminal domain E5E96_15385 PF02769 AIR synthase related protein, C-terminal domain E5E96_15400 PF00308 Bacterial dnaA protein E5E96_15405 PF00463 Isocitrate lyase family E5E96_15410 PF01274 Malate synthase E5E96_15420 PF14437 MafB19-like deaminase E5E96_15425 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_15430 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_15440 PF01895 PhoU domain E5E96_15445 PF01595 Cyclin M transmembrane N-terminal domain E5E96_15445 PF00571 CBS domain E5E96_15445 PF03471 Transporter associated domain E5E96_15455 PF02574 Homocysteine S-methyltransferase E5E96_15455 PF00809 Pterin binding enzyme E5E96_15455 PF02965 Vitamin B12 dependent methionine synthase, activation domain E5E96_15455 PF02607 B12 binding domain E5E96_15455 PF02310 B12 binding domain E5E96_15460 PF13520 Amino acid permease E5E96_15465 PF04116 Fatty acid hydroxylase superfamily E5E96_15480 PF00005 ABC transporter E5E96_15485 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_15490 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_15500 PF07690 Major Facilitator Superfamily E5E96_15505 PF05231 MASE1 E5E96_15505 PF07730 Histidine kinase E5E96_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_15510 PF00072 Response regulator receiver domain E5E96_15510 PF00196 Bacterial regulatory proteins, luxR family E5E96_15515 PF14760 Rnk N-terminus E5E96_15515 PF01272 Transcription elongation factor, GreA/GreB, C-term E5E96_15530 PF00245 Alkaline phosphatase E5E96_15535 PF00245 Alkaline phosphatase E5E96_15540 PF01926 50S ribosome-binding GTPase E5E96_15545 PF07690 Major Facilitator Superfamily E5E96_15550 PF00850 Histone deacetylase domain E5E96_15560 PF13307 Helicase C-terminal domain E5E96_15560 PF06733 DEAD_2 E5E96_15565 PF13609 Gram-negative porin E5E96_15575 PF00155 Aminotransferase class I and II E5E96_15580 PF00899 ThiF family E5E96_15585 PF00994 Probable molybdopterin binding domain E5E96_15585 PF03454 MoeA C-terminal region (domain IV) E5E96_15585 PF03453 MoeA N-terminal region (domain I and II) E5E96_15590 PF01227 GTP cyclohydrolase I E5E96_15595 PF00672 HAMP domain E5E96_15595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_15595 PF17200 Single Cache domain 2 E5E96_15600 PF01268 Formate--tetrahydrofolate ligase E5E96_15605 PF01268 Formate--tetrahydrofolate ligase E5E96_15615 PF03466 LysR substrate binding domain E5E96_15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_15620 PF04264 YceI-like domain E5E96_15645 PF01546 Peptidase family M20/M25/M40 E5E96_15645 PF07687 Peptidase dimerisation domain E5E96_15665 PF17944 Arginine decarboxylase C-terminal helical extension E5E96_15665 PF17810 Arginine decarboxylase helical bundle domain E5E96_15665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E5E96_15680 PF00672 HAMP domain E5E96_15680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_15680 PF12729 Four helix bundle sensory module for signal transduction E5E96_15690 PF01042 Endoribonuclease L-PSP E5E96_15695 PF03313 Serine dehydratase alpha chain E5E96_15710 PF01844 HNH endonuclease E5E96_15720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E5E96_15730 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E5E96_15730 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E5E96_15740 PF01479 S4 domain E5E96_15740 PF00849 RNA pseudouridylate synthase E5E96_15745 PF07690 Major Facilitator Superfamily E5E96_15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_15755 PF03466 LysR substrate binding domain E5E96_15760 PF07690 Major Facilitator Superfamily E5E96_15770 PF10689 Protein of unknown function (DUF2496) E5E96_15785 PF00892 EamA-like transporter family E5E96_15790 PF04391 Protein of unknown function (DUF533) E5E96_15795 PF00392 Bacterial regulatory proteins, gntR family E5E96_15795 PF00155 Aminotransferase class I and II E5E96_15800 PF01654 Cytochrome bd terminal oxidase subunit I E5E96_15805 PF02322 Cytochrome bd terminal oxidase subunit II E5E96_15815 PF07690 Major Facilitator Superfamily E5E96_15820 PF00248 Aldo/keto reductase family E5E96_15845 PF03466 LysR substrate binding domain E5E96_15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_15850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E5E96_15850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E5E96_15855 PF00230 Major intrinsic protein E5E96_15860 PF07690 Major Facilitator Superfamily E5E96_15865 PF00455 DeoR C terminal sensor domain E5E96_15865 PF08220 DeoR-like helix-turn-helix domain E5E96_15875 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E5E96_15875 PF01266 FAD dependent oxidoreductase E5E96_15880 PF03009 Glycerophosphoryl diester phosphodiesterase family E5E96_15885 PF00793 DAHP synthetase I family E5E96_15890 PF01817 Chorismate mutase type II E5E96_15890 PF02153 Prephenate dehydrogenase E5E96_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_15895 PF03466 LysR substrate binding domain E5E96_15900 PF04219 Protein of unknown function, DUF E5E96_15905 PF03974 Ecotin E5E96_15925 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E5E96_15925 PF00326 Prolyl oligopeptidase family E5E96_15930 PF07715 TonB-dependent Receptor Plug Domain E5E96_15930 PF00593 TonB dependent receptor E5E96_15935 PF00884 Sulfatase E5E96_15935 PF11893 Domain of unknown function (DUF3413) E5E96_15940 PF07208 Protein of unknown function (DUF1414) E5E96_15945 PF04245 37-kD nucleoid-associated bacterial protein E5E96_15950 PF01547 Bacterial extracellular solute-binding protein E5E96_15955 PF14785 Maltose transport system permease protein MalF P2 domain E5E96_15955 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_15960 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_15965 PF00005 ABC transporter E5E96_15965 PF08402 TOBE domain E5E96_15970 PF03976 Polyphosphate kinase 2 (PPK2) E5E96_15975 PF00561 alpha/beta hydrolase fold E5E96_15985 PF01594 AI-2E family transporter E5E96_15990 PF01206 Sulfurtransferase TusA E5E96_15995 PF13181 Tetratricopeptide repeat E5E96_15995 PF01435 Peptidase family M48 E5E96_16000 PF00578 AhpC/TSA family E5E96_16005 PF03960 ArsC family E5E96_16020 PF04336 Acyl carrier protein phosphodiesterase E5E96_16025 PF01979 Amidohydrolase family E5E96_16030 PF03956 Lysine exporter LysO E5E96_16035 PF00005 ABC transporter E5E96_16040 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_16045 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_16050 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_16060 PF04055 Radical SAM superfamily E5E96_16065 PF00563 EAL domain E5E96_16065 PF03707 Bacterial signalling protein N terminal repeat E5E96_16065 PF00990 Diguanylate cyclase, GGDEF domain E5E96_16070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E5E96_16070 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_16080 PF00912 Transglycosylase E5E96_16080 PF00905 Penicillin binding protein transpeptidase domain E5E96_16080 PF06832 Penicillin-Binding Protein C-terminus Family E5E96_16090 PF02568 Thiamine biosynthesis protein (ThiI) E5E96_16090 PF02926 THUMP domain E5E96_16100 PF03458 UPF0126 domain E5E96_16110 PF07196 Flagellin hook IN motif E5E96_16110 PF00669 Bacterial flagellin N-terminal helical region E5E96_16110 PF00700 Bacterial flagellin C-terminal helical region E5E96_16115 PF00700 Bacterial flagellin C-terminal helical region E5E96_16115 PF07196 Flagellin hook IN motif E5E96_16115 PF00669 Bacterial flagellin N-terminal helical region E5E96_16125 PF02465 Flagellar hook-associated protein 2 N-terminus E5E96_16125 PF07195 Flagellar hook-associated protein 2 C-terminus E5E96_16125 PF07196 Flagellin hook IN motif E5E96_16130 PF02561 Flagellar protein FliS E5E96_16145 PF01497 Periplasmic binding protein E5E96_16155 PF01048 Phosphorylase superfamily E5E96_16165 PF02535 ZIP Zinc transporter E5E96_16170 PF12729 Four helix bundle sensory module for signal transduction E5E96_16170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_16170 PF00672 HAMP domain E5E96_16175 PF00459 Inositol monophosphatase family E5E96_16185 PF00043 Glutathione S-transferase, C-terminal domain E5E96_16185 PF02798 Glutathione S-transferase, N-terminal domain E5E96_16190 PF07690 Major Facilitator Superfamily E5E96_16200 PF05164 Cell division protein ZapA E5E96_16205 PF03695 Uncharacterised protein family (UPF0149) E5E96_16210 PF01494 FAD binding domain E5E96_16215 PF01494 FAD binding domain E5E96_16220 PF08669 Glycine cleavage T-protein C-terminal barrel domain E5E96_16220 PF01571 Aminomethyltransferase folate-binding domain E5E96_16225 PF01597 Glycine cleavage H-protein E5E96_16230 PF02347 Glycine cleavage system P-protein E5E96_16250 PF06953 Arsenical resistance operon trans-acting repressor ArsD E5E96_16255 PF02374 Anion-transporting ATPase E5E96_16260 PF01758 Sodium Bile acid symporter family E5E96_16265 PF03960 ArsC family E5E96_16270 PF08241 Methyltransferase domain E5E96_16280 PF07690 Major Facilitator Superfamily E5E96_16285 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_16285 PF13192 Thioredoxin domain E5E96_16290 PF00578 AhpC/TSA family E5E96_16290 PF10417 C-terminal domain of 1-Cys peroxiredoxin E5E96_16295 PF00571 CBS domain E5E96_16300 PF02547 Queuosine biosynthesis protein E5E96_16305 PF01702 Queuine tRNA-ribosyltransferase E5E96_16310 PF02699 Preprotein translocase subunit E5E96_16315 PF02355 Protein export membrane protein E5E96_16315 PF07549 SecD/SecF GG Motif E5E96_16315 PF13721 SecD export protein N-terminal TM region E5E96_16320 PF07549 SecD/SecF GG Motif E5E96_16320 PF02355 Protein export membrane protein E5E96_16330 PF07719 Tetratricopeptide repeat E5E96_16330 PF13181 Tetratricopeptide repeat E5E96_16335 PF01136 Peptidase family U32 E5E96_16340 PF01136 Peptidase family U32 E5E96_16345 PF02036 SCP-2 sterol transfer family E5E96_16355 PF00588 SpoU rRNA Methylase family E5E96_16360 PF02082 Transcriptional regulator E5E96_16365 PF00266 Aminotransferase class-V E5E96_16370 PF01592 NifU-like N terminal domain E5E96_16375 PF01521 Iron-sulphur cluster biosynthesis E5E96_16380 PF07743 HSCB C-terminal oligomerisation domain E5E96_16385 PF00012 Hsp70 protein E5E96_16390 PF00111 2Fe-2S iron-sulfur cluster binding domain E5E96_16395 PF00883 Cytosol aminopeptidase family, catalytic domain E5E96_16395 PF12404 Peptidase E5E96_16405 PF00334 Nucleoside diphosphate kinase E5E96_16410 PF04055 Radical SAM superfamily E5E96_16420 PF13464 Domain of unknown function (DUF4115) E5E96_16425 PF04551 GcpE protein E5E96_16430 PF13393 Histidyl-tRNA synthetase E5E96_16430 PF03129 Anticodon binding domain E5E96_16435 PF09976 Tetratricopeptide repeat-like domain E5E96_16440 PF13360 PQQ-like domain E5E96_16445 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E5E96_16445 PF01926 50S ribosome-binding GTPase E5E96_16450 PF07191 zinc-ribbons E5E96_16460 PF01464 Transglycosylase SLT domain E5E96_16460 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_16465 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal E5E96_16465 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E5E96_16465 PF02769 AIR synthase related protein, C-terminal domain E5E96_16470 PF01966 HD domain E5E96_16475 PF00072 Response regulator receiver domain E5E96_16485 PF00361 Proton-conducting membrane transporter E5E96_16490 PF00361 Proton-conducting membrane transporter E5E96_16495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E5E96_16495 PF00361 Proton-conducting membrane transporter E5E96_16500 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E5E96_16505 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E5E96_16510 PF12838 4Fe-4S dicluster domain E5E96_16515 PF00146 NADH dehydrogenase E5E96_16520 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E5E96_16520 PF00384 Molybdopterin oxidoreductase E5E96_16520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E5E96_16525 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E5E96_16525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E5E96_16535 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E5E96_16535 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E5E96_16540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E5E96_16545 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E5E96_16550 PF13677 Membrane MotB of proton-channel complex MotA/MotB E5E96_16550 PF00691 OmpA family E5E96_16555 PF01618 MotA/TolQ/ExbB proton channel family E5E96_16570 PF04536 TPM domain E5E96_16580 PF03411 Penicillin-insensitive murein endopeptidase E5E96_16590 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) E5E96_16595 PF00248 Aldo/keto reductase family E5E96_16610 PF01212 Beta-eliminating lyase E5E96_16620 PF00072 Response regulator receiver domain E5E96_16625 PF03466 LysR substrate binding domain E5E96_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_16635 PF13188 PAS domain E5E96_16635 PF03707 Bacterial signalling protein N terminal repeat E5E96_16635 PF00990 Diguanylate cyclase, GGDEF domain E5E96_16635 PF00563 EAL domain E5E96_16640 PF00881 Nitroreductase family E5E96_16655 PF07690 Major Facilitator Superfamily E5E96_16660 PF03466 LysR substrate binding domain E5E96_16660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_16665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_16665 PF03466 LysR substrate binding domain E5E96_16670 PF00925 GTP cyclohydrolase II E5E96_16675 PF02224 Cytidylate kinase E5E96_16680 PF00575 S1 RNA binding domain E5E96_16685 PF00216 Bacterial DNA-binding protein E5E96_16695 PF18073 Rubredoxin metal binding domain E5E96_16700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E5E96_16715 PF06508 Queuosine biosynthesis protein QueC E5E96_16720 PF04055 Radical SAM superfamily E5E96_16725 PF12843 Putative quorum-sensing-regulated virulence factor E5E96_16730 PF01923 Cobalamin adenosyltransferase E5E96_16735 PF00816 H-NS histone family E5E96_16740 PF03553 Na+/H+ antiporter family E5E96_16745 PF00265 Thymidine kinase E5E96_16755 PF10722 Putative bacterial sensory transduction regulator E5E96_16770 PF05638 Type VI secretion system effector, Hcp E5E96_16775 PF04717 Type VI secretion system, phage-baseplate injector E5E96_16785 PF05593 RHS Repeat E5E96_16785 PF03527 RHS protein E5E96_16845 PF17871 AAA lid domain E5E96_16845 PF07724 AAA domain (Cdc48 subfamily) E5E96_16845 PF10431 C-terminal, D2-small domain, of ClpB protein E5E96_16845 PF00004 ATPase family associated with various cellular activities (AAA) E5E96_16850 PF00158 Sigma-54 interaction domain E5E96_16850 PF02830 V4R domain E5E96_16850 PF06505 Activator of aromatic catabolism E5E96_16850 PF02954 Bacterial regulatory protein, Fis family E5E96_16880 PF04717 Type VI secretion system, phage-baseplate injector E5E96_16965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E5E96_16965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E5E96_16970 PF00313 'Cold-shock' DNA-binding domain E5E96_16975 PF02617 ATP-dependent Clp protease adaptor protein ClpS E5E96_16985 PF01176 Translation initiation factor 1A / IF-1 E5E96_16990 PF04377 Arginine-tRNA-protein transferase, C terminus E5E96_16990 PF04376 Arginine-tRNA-protein transferase, N terminus E5E96_16995 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E5E96_17000 PF05433 Glycine zipper 2TM domain E5E96_17005 PF17158 Membrane-associated sensor, integral membrane domain E5E96_17005 PF00990 Diguanylate cyclase, GGDEF domain E5E96_17010 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_17015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E5E96_17015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E5E96_17020 PF01037 Lrp/AsnC ligand binding domain E5E96_17025 PF17854 FtsK alpha domain E5E96_17025 PF09397 Ftsk gamma domain E5E96_17025 PF01580 FtsK/SpoIIIE family E5E96_17025 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E5E96_17030 PF03548 Outer membrane lipoprotein carrier protein LolA E5E96_17035 PF16193 AAA C-terminal domain E5E96_17035 PF12002 MgsA AAA+ ATPase C terminal E5E96_17035 PF00004 ATPase family associated with various cellular activities (AAA) E5E96_17040 PF02403 Seryl-tRNA synthetase N-terminal domain E5E96_17040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E5E96_17045 PF02674 Colicin V production protein E5E96_17050 PF00156 Phosphoribosyl transferase domain E5E96_17055 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) E5E96_17060 PF00005 ABC transporter E5E96_17065 PF00005 ABC transporter E5E96_17065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E5E96_17070 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_17070 PF12911 N-terminal TM domain of oligopeptide transport permease C E5E96_17075 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_17080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_17085 PF00158 Sigma-54 interaction domain E5E96_17085 PF02954 Bacterial regulatory protein, Fis family E5E96_17090 PF04012 PspA/IM30 family E5E96_17095 PF06667 Phage shock protein B E5E96_17105 PF04317 YcjX-like family, DUF463 E5E96_17110 PF05128 Domain of unknown function (DUF697) E5E96_17115 PF00351 Biopterin-dependent aromatic amino acid hydroxylase E5E96_17120 PF01329 Pterin 4 alpha carbinolamine dehydratase E5E96_17130 PF00158 Sigma-54 interaction domain E5E96_17130 PF18024 Helix-turn-helix domain E5E96_17135 PF13689 YfiR/HmsC-like E5E96_17140 PF17152 Periplasmic sensor domain E5E96_17140 PF00990 Diguanylate cyclase, GGDEF domain E5E96_17145 PF00691 OmpA family E5E96_17150 PF03741 Integral membrane protein TerC family E5E96_17160 PF08891 YfcL protein E5E96_17165 PF00501 AMP-binding enzyme E5E96_17170 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region E5E96_17170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E5E96_17175 PF04172 LrgB-like family E5E96_17180 PF03788 LrgA family E5E96_17195 PF08411 Exonuclease C-terminal E5E96_17195 PF00929 Exonuclease E5E96_17200 PF02610 L-arabinose isomerase E5E96_17200 PF11762 L-arabinose isomerase C-terminal domain E5E96_17205 PF00596 Class II Aldolase and Adducin N-terminal domain E5E96_17210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E5E96_17215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E5E96_17220 PF00005 ABC transporter E5E96_17225 PF02653 Branched-chain amino acid transport system / permease component E5E96_17230 PF12833 Helix-turn-helix domain E5E96_17230 PF02311 AraC-like ligand binding domain E5E96_17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_17235 PF03466 LysR substrate binding domain E5E96_17240 PF05726 Pirin C-terminal cupin domain E5E96_17240 PF02678 Pirin E5E96_17245 PF00444 Ribosomal protein L36 E5E96_17250 PF01197 Ribosomal protein L31 E5E96_17265 PF01863 Protein of unknown function DUF45 E5E96_17280 PF03606 C4-dicarboxylate anaerobic carrier E5E96_17290 PF01266 FAD dependent oxidoreductase E5E96_17290 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E5E96_17295 PF02801 Beta-ketoacyl synthase, C-terminal domain E5E96_17295 PF00109 Beta-ketoacyl synthase, N-terminal domain E5E96_17310 PF00285 Citrate synthase, C-terminal domain E5E96_17315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E5E96_17320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E5E96_17325 PF00890 FAD binding domain E5E96_17325 PF02910 Fumarate reductase flavoprotein C-term E5E96_17330 PF13085 2Fe-2S iron-sulfur cluster binding domain E5E96_17335 PF16870 2-oxoglutarate dehydrogenase C-terminal E5E96_17335 PF02779 Transketolase, pyrimidine binding domain E5E96_17335 PF00676 Dehydrogenase E1 component E5E96_17335 PF16078 2-oxoglutarate dehydrogenase N-terminus E5E96_17340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E5E96_17340 PF00364 Biotin-requiring enzyme E5E96_17340 PF02817 e3 binding domain E5E96_17345 PF00549 CoA-ligase E5E96_17345 PF08442 ATP-grasp domain E5E96_17350 PF02629 CoA binding domain E5E96_17350 PF00549 CoA-ligase E5E96_17360 PF03692 Putative zinc- or iron-chelating domain E5E96_17365 PF01266 FAD dependent oxidoreductase E5E96_17370 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_17375 PF00005 ABC transporter E5E96_17385 PF00392 Bacterial regulatory proteins, gntR family E5E96_17385 PF07702 UTRA domain E5E96_17390 PF00266 Aminotransferase class-V E5E96_17405 PF02901 Pyruvate formate lyase-like E5E96_17405 PF01228 Glycine radical E5E96_17410 PF01226 Formate/nitrite transporter E5E96_17415 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding E5E96_17415 PF18381 YcaO cyclodehydratase C-terminal domain E5E96_17420 PF00893 Small Multidrug Resistance protein E5E96_17425 PF01118 Semialdehyde dehydrogenase, NAD binding domain E5E96_17425 PF02774 Semialdehyde dehydrogenase, dimerisation domain E5E96_17430 PF00675 Insulinase (Peptidase family M16) E5E96_17430 PF05193 Peptidase M16 inactive domain E5E96_17435 PF01053 Cys/Met metabolism PLP-dependent enzyme E5E96_17445 PF13460 NAD(P)H-binding E5E96_17450 PF03466 LysR substrate binding domain E5E96_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_17455 PF00106 short chain dehydrogenase E5E96_17460 PF12833 Helix-turn-helix domain E5E96_17465 PF07715 TonB-dependent Receptor Plug Domain E5E96_17465 PF00593 TonB dependent receptor E5E96_17475 PF03466 LysR substrate binding domain E5E96_17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_17480 PF08267 Cobalamin-independent synthase, N-terminal domain E5E96_17480 PF01717 Cobalamin-independent synthase, Catalytic domain E5E96_17490 PF00571 CBS domain E5E96_17490 PF00478 IMP dehydrogenase / GMP reductase domain E5E96_17505 PF13737 Transposase DDE domain E5E96_17510 PF07969 Amidohydrolase family E5E96_17520 PF01266 FAD dependent oxidoreductase E5E96_17535 PF01212 Beta-eliminating lyase E5E96_17540 PF00768 D-alanyl-D-alanine carboxypeptidase E5E96_17545 PF00293 NUDIX domain E5E96_17550 PF03918 Cytochrome C biogenesis protein E5E96_17555 PF08534 Redoxin E5E96_17560 PF01578 Cytochrome C assembly protein E5E96_17560 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E5E96_17565 PF03916 Polysulphide reductase, NrfD E5E96_17570 PF13247 4Fe-4S dicluster domain E5E96_17570 PF00037 4Fe-4S binding domain E5E96_17575 PF13435 Cytochrome c554 and c-prime E5E96_17575 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E5E96_17580 PF02335 Cytochrome c552 E5E96_17585 PF02754 Cysteine-rich domain E5E96_17585 PF13183 4Fe-4S dicluster domain E5E96_17590 PF00890 FAD binding domain E5E96_17595 PF04324 BFD-like [2Fe-2S] binding domain E5E96_17595 PF01266 FAD dependent oxidoreductase E5E96_17600 PF02810 SEC-C motif E5E96_17605 PF17200 Single Cache domain 2 E5E96_17605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_17605 PF00672 HAMP domain E5E96_17610 PF00480 ROK family E5E96_17610 PF01047 MarR family E5E96_17620 PF12431 Transcriptional regulator E5E96_17620 PF00072 Response regulator receiver domain E5E96_17625 PF01970 Tripartite tricarboxylate transporter TctA family E5E96_17645 PF02080 TrkA-C domain E5E96_17645 PF06826 Predicted Permease Membrane Region E5E96_17660 PF00271 Helicase conserved C-terminal domain E5E96_17660 PF04851 Type III restriction enzyme, res subunit E5E96_17660 PF17757 UvrB interaction domain E5E96_17660 PF12344 Ultra-violet resistance protein B E5E96_17660 PF02151 UvrB/uvrC motif E5E96_17670 PF09335 SNARE associated Golgi protein E5E96_17675 PF02600 Disulfide bond formation protein DsbB E5E96_17680 PF06450 Bacterial Na+/H+ antiporter B (NhaB) E5E96_17685 PF07840 FadR C-terminal domain E5E96_17685 PF00392 Bacterial regulatory proteins, gntR family E5E96_17690 PF04293 SpoVR like protein E5E96_17695 PF04285 Protein of unknown function (DUF444) E5E96_17700 PF06798 PrkA serine protein kinase C-terminal domain E5E96_17700 PF08298 PrkA AAA domain E5E96_17705 PF00271 Helicase conserved C-terminal domain E5E96_17705 PF00270 DEAD/DEAH box helicase E5E96_17705 PF00570 HRDC domain E5E96_17705 PF16124 RecQ zinc-binding E5E96_17705 PF09382 RQC domain E5E96_17710 PF00375 Sodium:dicarboxylate symporter family E5E96_17715 PF03222 Tryptophan/tyrosine permease family E5E96_17720 PF00293 NUDIX domain E5E96_17725 PF04715 Anthranilate synthase component I, N terminal region E5E96_17725 PF00425 chorismate binding enzyme E5E96_17750 PF00343 Carbohydrate phosphorylase E5E96_17755 PF00939 Sodium:sulfate symporter transmembrane region E5E96_17760 PF00085 Thioredoxin E5E96_17765 PF00672 HAMP domain E5E96_17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_17765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E5E96_17765 PF00072 Response regulator receiver domain E5E96_17765 PF01627 Hpt domain E5E96_17765 PF00512 His Kinase A (phospho-acceptor) domain E5E96_17780 PF00664 ABC transporter transmembrane region E5E96_17780 PF00005 ABC transporter E5E96_17800 PF01575 MaoC like domain E5E96_17805 PF00561 alpha/beta hydrolase fold E5E96_17805 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus E5E96_17830 PF08543 Phosphomethylpyrimidine kinase E5E96_17835 PF03992 Antibiotic biosynthesis monooxygenase E5E96_17840 PF00465 Iron-containing alcohol dehydrogenase E5E96_17845 PF00583 Acetyltransferase (GNAT) family E5E96_17855 PF01928 CYTH domain E5E96_17865 PF02694 Uncharacterised BCR, YnfA/UPF0060 family E5E96_17875 PF13673 Acetyltransferase (GNAT) domain E5E96_17880 PF00271 Helicase conserved C-terminal domain E5E96_17880 PF00270 DEAD/DEAH box helicase E5E96_17885 PF00255 Glutathione peroxidase E5E96_17900 PF01820 D-ala D-ala ligase N-terminus E5E96_17900 PF07478 D-ala D-ala ligase C-terminus E5E96_17905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E5E96_17905 PF18029 Glyoxalase-like domain E5E96_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_17920 PF03466 LysR substrate binding domain E5E96_17930 PF12833 Helix-turn-helix domain E5E96_17930 PF14525 AraC-binding-like domain E5E96_17935 PF11398 Protein of unknown function (DUF2813) E5E96_17945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E5E96_17945 PF00128 Alpha amylase, catalytic domain E5E96_17990 PF00883 Cytosol aminopeptidase family, catalytic domain E5E96_17990 PF02789 Cytosol aminopeptidase family, N-terminal domain E5E96_17995 PF13419 Haloacid dehalogenase-like hydrolase E5E96_18000 PF01546 Peptidase family M20/M25/M40 E5E96_18000 PF07687 Peptidase dimerisation domain E5E96_18005 PF00365 Phosphofructokinase E5E96_18010 PF00121 Triosephosphate isomerase E5E96_18015 PF02698 DUF218 domain E5E96_18020 PF13847 Methyltransferase domain E5E96_18025 PF17192 MukF middle domain E5E96_18025 PF17193 MukF C-terminal domain E5E96_18025 PF03882 MukF winged-helix domain E5E96_18030 PF04288 MukE-like family E5E96_18035 PF04310 MukB N-terminal E5E96_18035 PF16330 MukB hinge domain E5E96_18040 PF05036 Sporulation related domain E5E96_18040 PF03330 Lytic transglycolase E5E96_18055 PF01327 Polypeptide deformylase E5E96_18085 PF02567 Phenazine biosynthesis-like protein E5E96_18105 PF03831 PhnA domain E5E96_18105 PF08274 PhnA Zinc-Ribbon E5E96_18115 PF00704 Glycosyl hydrolases family 18 E5E96_18115 PF08329 Chitinase A, N-terminal domain E5E96_18130 PF00300 Histidine phosphatase superfamily (branch 1) E5E96_18135 PF08448 PAS fold E5E96_18135 PF00990 Diguanylate cyclase, GGDEF domain E5E96_18145 PF01713 Smr domain E5E96_18150 PF05175 Methyltransferase small domain E5E96_18155 PF01264 Chorismate synthase E5E96_18165 PF00271 Helicase conserved C-terminal domain E5E96_18165 PF00270 DEAD/DEAH box helicase E5E96_18180 PF03222 Tryptophan/tyrosine permease family E5E96_18185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E5E96_18185 PF00356 Bacterial regulatory proteins, lacI family E5E96_18190 PF00381 PTS HPr component phosphorylation site E5E96_18190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E5E96_18195 PF00294 pfkB family carbohydrate kinase E5E96_18200 PF02378 Phosphotransferase system, EIIC E5E96_18200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E5E96_18205 PF06560 Glucose-6-phosphate isomerase (GPI) E5E96_18210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E5E96_18210 PF00356 Bacterial regulatory proteins, lacI family E5E96_18225 PF03830 PTS system sorbose subfamily IIB component E5E96_18225 PF03610 PTS system fructose IIA component E5E96_18230 PF03609 PTS system sorbose-specific iic component E5E96_18235 PF03613 PTS system mannose/fructose/sorbose family IID component E5E96_18245 PF06945 Protein of unknown function (DUF1289) E5E96_18250 PF06725 3D domain E5E96_18250 PF03562 MltA specific insert domain E5E96_18255 PF00111 2Fe-2S iron-sulfur cluster binding domain E5E96_18260 PF00268 Ribonucleotide reductase, small chain E5E96_18265 PF02867 Ribonucleotide reductase, barrel domain E5E96_18265 PF03477 ATP cone domain E5E96_18265 PF00317 Ribonucleotide reductase, all-alpha domain E5E96_18270 PF13419 Haloacid dehalogenase-like hydrolase E5E96_18280 PF03989 DNA gyrase C-terminal domain, beta-propeller E5E96_18280 PF00521 DNA gyrase/topoisomerase IV, subunit A E5E96_18285 PF04055 Radical SAM superfamily E5E96_18295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E5E96_18295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E5E96_18295 PF02824 TGS domain E5E96_18295 PF03129 Anticodon binding domain E5E96_18300 PF00707 Translation initiation factor IF-3, C-terminal domain E5E96_18300 PF05198 Translation initiation factor IF-3, N-terminal domain E5E96_18305 PF01632 Ribosomal protein L35 E5E96_18310 PF00453 Ribosomal protein L20 E5E96_18315 PF01409 tRNA synthetases class II core domain (F) E5E96_18315 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E5E96_18320 PF01588 Putative tRNA binding domain E5E96_18320 PF03147 Ferredoxin-fold anticodon binding domain E5E96_18320 PF03484 tRNA synthetase B5 domain E5E96_18320 PF03483 B3/4 domain E5E96_18320 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E5E96_18325 PF00216 Bacterial DNA-binding protein E5E96_18330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_18330 PF00512 His Kinase A (phospho-acceptor) domain E5E96_18330 PF00072 Response regulator receiver domain E5E96_18330 PF09456 RcsC Alpha-Beta-Loop (ABL) E5E96_18345 PF02146 Sir2 family E5E96_18355 PF17152 Periplasmic sensor domain E5E96_18355 PF00990 Diguanylate cyclase, GGDEF domain E5E96_18360 PF00356 Bacterial regulatory proteins, lacI family E5E96_18365 PF00294 pfkB family carbohydrate kinase E5E96_18370 PF13407 Periplasmic binding protein domain E5E96_18375 PF02653 Branched-chain amino acid transport system / permease component E5E96_18380 PF00005 ABC transporter E5E96_18385 PF05025 RbsD / FucU transport protein family E5E96_18390 PF13417 Glutathione S-transferase, N-terminal domain E5E96_18405 PF01171 PP-loop family E5E96_18410 PF00582 Universal stress protein family E5E96_18415 PF00027 Cyclic nucleotide-binding domain E5E96_18415 PF13545 Crp-like helix-turn-helix domain E5E96_18430 PF00403 Heavy-metal-associated domain E5E96_18440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E5E96_18440 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP E5E96_18455 PF00115 Cytochrome C and Quinol oxidase polypeptide I E5E96_18465 PF13185 GAF domain E5E96_18470 PF04352 ProQ/FINO family E5E96_18470 PF17516 ProQ C-terminal domain E5E96_18475 PF03572 Peptidase family S41 E5E96_18475 PF17804 Tail specific protease N-terminal domain E5E96_18475 PF11818 C-terminal domain of tail specific protease (DUF3340) E5E96_18475 PF00595 PDZ domain E5E96_18480 PF11940 Domain of unknown function (DUF3458) Ig-like fold E5E96_18480 PF17432 Domain of unknown function (DUF3458_C) ARM repeats E5E96_18480 PF01433 Peptidase family M1 domain E5E96_18490 PF05088 Bacterial NAD-glutamate dehydrogenase E5E96_18495 PF01180 Dihydroorotate dehydrogenase E5E96_18500 PF07126 Cell-division protein ZapC E5E96_18515 PF16326 ABC transporter C-terminal domain E5E96_18515 PF12848 ABC transporter E5E96_18515 PF00005 ABC transporter E5E96_18525 PF04957 Ribosome modulation factor E5E96_18530 PF07977 FabA-like domain E5E96_18535 PF05362 Lon protease (S16) C-terminal proteolytic domain E5E96_18535 PF13654 AAA domain E5E96_18570 PF10734 Protein of unknown function (DUF2523) E5E96_18575 PF05707 Zonular occludens toxin (Zot) E5E96_18595 PF07130 YebG protein E5E96_18605 PF00106 short chain dehydrogenase E5E96_18630 PF06974 Protein of unknown function (DUF1298) E5E96_18630 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain E5E96_18645 PF03972 MmgE/PrpD family E5E96_18650 PF00285 Citrate synthase, C-terminal domain E5E96_18665 PF04403 Paraquat-inducible protein A E5E96_18670 PF02470 MlaD protein E5E96_18675 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E5E96_18675 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E5E96_18675 PF01189 16S rRNA methyltransferase RsmB/F E5E96_18710 PF00589 Phage integrase family E5E96_18715 PF01026 TatD related DNase E5E96_18720 PF09115 DNA polymerase III, delta subunit, C terminal E5E96_18725 PF02223 Thymidylate kinase E5E96_18730 PF02618 YceG-like family E5E96_18735 PF01063 Amino-transferase class IV E5E96_18740 PF02801 Beta-ketoacyl synthase, C-terminal domain E5E96_18740 PF00109 Beta-ketoacyl synthase, N-terminal domain E5E96_18745 PF00550 Phosphopantetheine attachment site E5E96_18755 PF00698 Acyl transferase domain E5E96_18760 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E5E96_18760 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E5E96_18765 PF02504 Fatty acid synthesis protein E5E96_18770 PF01783 Ribosomal L32p protein family E5E96_18775 PF02620 Large ribosomal RNA subunit accumulation protein YceD E5E96_18785 PF03466 LysR substrate binding domain E5E96_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_18790 PF07690 Major Facilitator Superfamily E5E96_18795 PF02545 Maf-like protein E5E96_18800 PF13419 Haloacid dehalogenase-like hydrolase E5E96_18805 PF00849 RNA pseudouridylate synthase E5E96_18805 PF01479 S4 domain E5E96_18810 PF12111 Polyribonucleotide phosphorylase C terminal E5E96_18810 PF00575 S1 RNA binding domain E5E96_18810 PF10150 Ribonuclease E/G family E5E96_18815 PF01384 Phosphate transporter family E5E96_18825 PF00692 dUTPase E5E96_18830 PF00485 Phosphoribulokinase / Uridine kinase family E5E96_18835 PF10609 NUBPL iron-transfer P-loop NTPase E5E96_18840 PF09334 tRNA synthetases class I (M) E5E96_18840 PF08264 Anticodon-binding domain of tRNA E5E96_18840 PF01588 Putative tRNA binding domain E5E96_18845 PF02798 Glutathione S-transferase, N-terminal domain E5E96_18845 PF00043 Glutathione S-transferase, C-terminal domain E5E96_18850 PF00708 Acylphosphatase E5E96_18855 PF00672 HAMP domain E5E96_18855 PF12729 Four helix bundle sensory module for signal transduction E5E96_18855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_18860 PF17785 PUA-like domain E5E96_18860 PF10672 S-adenosylmethionine-dependent methyltransferase E5E96_18875 PF02769 AIR synthase related protein, C-terminal domain E5E96_18875 PF00586 AIR synthase related protein, N-terminal domain E5E96_18885 PF00753 Metallo-beta-lactamase superfamily E5E96_18890 PF00072 Response regulator receiver domain E5E96_18900 PF01386 Ribosomal L25p family E5E96_18910 PF11898 Domain of unknown function (DUF3418) E5E96_18910 PF00271 Helicase conserved C-terminal domain E5E96_18910 PF00270 DEAD/DEAH box helicase E5E96_18910 PF04408 Helicase associated domain (HA2) E5E96_18910 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E5E96_18915 PF01368 DHH family E5E96_18915 PF01743 Poly A polymerase head domain E5E96_18915 PF00571 CBS domain E5E96_18915 PF02272 DHHA1 domain E5E96_18920 PF00196 Bacterial regulatory proteins, luxR family E5E96_18920 PF00072 Response regulator receiver domain E5E96_18935 PF02575 YbaB/EbfC DNA-binding family E5E96_18940 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E5E96_18940 PF12169 DNA polymerase III subunits gamma and tau domain III E5E96_18940 PF12170 DNA polymerase III tau subunit V interacting with alpha E5E96_18945 PF00156 Phosphoribosyl transferase domain E5E96_18950 PF04304 Protein of unknown function (DUF454) E5E96_18955 PF01207 Dihydrouridine synthase (Dus) E5E96_18970 PF01612 3'-5' exonuclease E5E96_18970 PF00570 HRDC domain E5E96_18975 PF00501 AMP-binding enzyme E5E96_18975 PF13193 AMP-binding enzyme C-terminal domain E5E96_18980 PF08241 Methyltransferase domain E5E96_18980 PF12697 Alpha/beta hydrolase family E5E96_18990 PF00814 Glycoprotease family E5E96_19000 PF13307 Helicase C-terminal domain E5E96_19000 PF04851 Type III restriction enzyme, res subunit E5E96_19010 PF01634 ATP phosphoribosyltransferase E5E96_19010 PF08029 HisG, C-terminal domain E5E96_19015 PF00815 Histidinol dehydrogenase E5E96_19020 PF00155 Aminotransferase class I and II E5E96_19025 PF08645 Polynucleotide kinase 3 phosphatase E5E96_19025 PF00475 Imidazoleglycerol-phosphate dehydratase E5E96_19030 PF00117 Glutamine amidotransferase class-I E5E96_19035 PF00977 Histidine biosynthesis protein E5E96_19050 PF01627 Hpt domain E5E96_19050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_19050 PF00072 Response regulator receiver domain E5E96_19050 PF00512 His Kinase A (phospho-acceptor) domain E5E96_19055 PF00977 Histidine biosynthesis protein E5E96_19060 PF01502 Phosphoribosyl-AMP cyclohydrolase E5E96_19060 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E5E96_19070 PF13280 WYL domain E5E96_19070 PF08279 HTH domain E5E96_19075 PF13193 AMP-binding enzyme C-terminal domain E5E96_19075 PF00501 AMP-binding enzyme E5E96_19080 PF03606 C4-dicarboxylate anaerobic carrier E5E96_19090 PF05433 Glycine zipper 2TM domain E5E96_19100 PF01799 [2Fe-2S] binding domain E5E96_19100 PF00111 2Fe-2S iron-sulfur cluster binding domain E5E96_19105 PF03450 CO dehydrogenase flavoprotein C-terminal domain E5E96_19105 PF00941 FAD binding domain in molybdopterin dehydrogenase E5E96_19110 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E5E96_19110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E5E96_19115 PF00860 Permease family E5E96_19120 PF01979 Amidohydrolase family E5E96_19125 PF00860 Permease family E5E96_19140 PF01979 Amidohydrolase family E5E96_19145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E5E96_19145 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_19150 PF12804 MobA-like NTP transferase domain E5E96_19160 PF02625 XdhC and CoxI family E5E96_19160 PF13478 XdhC Rossmann domain E5E96_19165 PF00892 EamA-like transporter family E5E96_19170 PF00696 Amino acid kinase family E5E96_19175 PF01979 Amidohydrolase family E5E96_19180 PF07687 Peptidase dimerisation domain E5E96_19180 PF01546 Peptidase family M20/M25/M40 E5E96_19185 PF00291 Pyridoxal-phosphate dependent enzyme E5E96_19190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E5E96_19190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E5E96_19205 PF07152 YaeQ protein E5E96_19215 PF00378 Enoyl-CoA hydratase/isomerase E5E96_19215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E5E96_19215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E5E96_19220 PF02803 Thiolase, C-terminal domain E5E96_19220 PF00108 Thiolase, N-terminal domain E5E96_19225 PF17863 AAA lid domain E5E96_19225 PF07726 ATPase family associated with various cellular activities (AAA) E5E96_19230 PF01882 Protein of unknown function DUF58 E5E96_19255 PF08281 Sigma-70, region 4 E5E96_19255 PF04542 Sigma-70 region 2 E5E96_19265 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E5E96_19270 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E5E96_19280 PF00108 Thiolase, N-terminal domain E5E96_19280 PF02803 Thiolase, C-terminal domain E5E96_19285 PF00376 MerR family regulatory protein E5E96_19285 PF09278 MerR, DNA binding E5E96_19290 PF00375 Sodium:dicarboxylate symporter family E5E96_19295 PF06865 Pyrimidine/purine nucleoside phosphorylase E5E96_19300 PF03313 Serine dehydratase alpha chain E5E96_19300 PF03315 Serine dehydratase beta chain E5E96_19310 PF03315 Serine dehydratase beta chain E5E96_19310 PF03313 Serine dehydratase alpha chain E5E96_19315 PF13406 Transglycosylase SLT domain E5E96_19320 PF05166 YcgL domain E5E96_19330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E5E96_19335 PF03776 Septum formation topological specificity factor MinE E5E96_19340 PF04269 Protein of unknown function, DUF440 E5E96_19345 PF00912 Transglycosylase E5E96_19350 PF04269 Protein of unknown function, DUF440 E5E96_19360 PF13509 S1 domain E5E96_19360 PF17783 CvfB-like winged helix domain E5E96_19385 PF02525 Flavodoxin-like fold E5E96_19390 PF00892 EamA-like transporter family E5E96_19395 PF02222 ATP-grasp domain E5E96_19395 PF01370 NAD dependent epimerase/dehydratase family E5E96_19400 PF13419 Haloacid dehalogenase-like hydrolase E5E96_19410 PF00677 Lumazine binding domain E5E96_19415 PF06786 Uncharacterised protein family (UPF0253) E5E96_19420 PF01554 MatE E5E96_19450 PF03104 DNA polymerase family B, exonuclease domain E5E96_19450 PF00136 DNA polymerase family B E5E96_19460 PF00990 Diguanylate cyclase, GGDEF domain E5E96_19460 PF17151 Periplasmic sensor domain E5E96_19475 PF03279 Bacterial lipid A biosynthesis acyltransferase E5E96_19480 PF03279 Bacterial lipid A biosynthesis acyltransferase E5E96_19490 PF03466 LysR substrate binding domain E5E96_19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_19495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E5E96_19495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E5E96_19500 PF01261 Xylose isomerase-like TIM barrel E5E96_19505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_19505 PF03466 LysR substrate binding domain E5E96_19515 PF01966 HD domain E5E96_19525 PF00563 EAL domain E5E96_19525 PF00990 Diguanylate cyclase, GGDEF domain E5E96_19525 PF03707 Bacterial signalling protein N terminal repeat E5E96_19525 PF13188 PAS domain E5E96_19530 PF00232 Glycosyl hydrolase family 1 E5E96_19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_19535 PF03466 LysR substrate binding domain E5E96_19570 PF00239 Resolvase, N terminal domain E5E96_19570 PF02796 Helix-turn-helix domain of resolvase E5E96_19580 PF04002 RadC-like JAB domain E5E96_19605 PF02384 N-6 DNA Methylase E5E96_19620 PF00589 Phage integrase family E5E96_19620 PF14659 Phage integrase, N-terminal SAM-like domain E5E96_19630 PF01925 Sulfite exporter TauE/SafE E5E96_19635 PF13520 Amino acid permease E5E96_19645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E5E96_19645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E5E96_19650 PF00378 Enoyl-CoA hydratase/isomerase E5E96_19660 PF02770 Acyl-CoA dehydrogenase, middle domain E5E96_19660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E5E96_19660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E5E96_19665 PF00171 Aldehyde dehydrogenase family E5E96_19670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E5E96_19670 PF02770 Acyl-CoA dehydrogenase, middle domain E5E96_19670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E5E96_19675 PF01039 Carboxyl transferase domain E5E96_19680 PF00378 Enoyl-CoA hydratase/isomerase E5E96_19685 PF02785 Biotin carboxylase C-terminal domain E5E96_19685 PF00364 Biotin-requiring enzyme E5E96_19685 PF00289 Biotin carboxylase, N-terminal domain E5E96_19685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E5E96_19690 PF00682 HMGL-like E5E96_19695 PF00376 MerR family regulatory protein E5E96_19695 PF09278 MerR, DNA binding E5E96_19710 PF01184 GPR1/FUN34/yaaH family E5E96_19715 PF06167 Glucose-regulated metallo-peptidase M90 E5E96_19725 PF01235 Sodium:alanine symporter family E5E96_19765 PF00378 Enoyl-CoA hydratase/isomerase E5E96_19780 PF04341 Protein of unknown function, DUF485 E5E96_19785 PF00474 Sodium:solute symporter family E5E96_19790 PF12848 ABC transporter E5E96_19790 PF00005 ABC transporter E5E96_19795 PF13145 PPIC-type PPIASE domain E5E96_19800 PF00216 Bacterial DNA-binding protein E5E96_19805 PF05362 Lon protease (S16) C-terminal proteolytic domain E5E96_19805 PF00004 ATPase family associated with various cellular activities (AAA) E5E96_19805 PF02190 ATP-dependent protease La (LON) substrate-binding domain E5E96_19810 PF06689 ClpX C4-type zinc finger E5E96_19810 PF10431 C-terminal, D2-small domain, of ClpB protein E5E96_19810 PF07724 AAA domain (Cdc48 subfamily) E5E96_19815 PF00574 Clp protease E5E96_19820 PF05697 Bacterial trigger factor protein (TF) E5E96_19820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E5E96_19820 PF05698 Bacterial trigger factor protein (TF) C-terminus E5E96_19840 PF02687 FtsX-like permease family E5E96_19840 PF12704 MacB-like periplasmic core domain E5E96_19845 PF00005 ABC transporter E5E96_19850 PF02687 FtsX-like permease family E5E96_19850 PF12704 MacB-like periplasmic core domain E5E96_19865 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E5E96_19870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_19875 PF00892 EamA-like transporter family E5E96_19885 PF00300 Histidine phosphatase superfamily (branch 1) E5E96_19890 PF00675 Insulinase (Peptidase family M16) E5E96_19890 PF05193 Peptidase M16 inactive domain E5E96_19895 PF05724 Thiopurine S-methyltransferase (TPMT) E5E96_19910 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E5E96_19910 PF02805 Metal binding domain of Ada E5E96_19910 PF12833 Helix-turn-helix domain E5E96_19910 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E5E96_19935 PF00117 Glutamine amidotransferase class-I E5E96_19935 PF02540 NAD synthase E5E96_19935 PF00958 GMP synthase C terminal domain E5E96_19940 PF00571 CBS domain E5E96_19940 PF00478 IMP dehydrogenase / GMP reductase domain E5E96_19945 PF02705 K+ potassium transporter E5E96_19955 PF01618 MotA/TolQ/ExbB proton channel family E5E96_19960 PF02472 Biopolymer transport protein ExbD/TolR E5E96_19965 PF00892 EamA-like transporter family E5E96_19970 PF13742 OB-fold nucleic acid binding domain E5E96_19970 PF02601 Exonuclease VII, large subunit E5E96_19975 PF04055 Radical SAM superfamily E5E96_19980 PF00672 HAMP domain E5E96_19980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_19985 PF00793 DAHP synthetase I family E5E96_19990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E5E96_19995 PF00266 Aminotransferase class-V E5E96_20000 PF01012 Electron transfer flavoprotein domain E5E96_20000 PF00766 Electron transfer flavoprotein FAD-binding domain E5E96_20005 PF01012 Electron transfer flavoprotein domain E5E96_20015 PF01544 CorA-like Mg2+ transporter protein E5E96_20020 PF11143 Protein of unknown function (DUF2919) E5E96_20035 PF00593 TonB dependent receptor E5E96_20035 PF07715 TonB-dependent Receptor Plug Domain E5E96_20040 PF01032 FecCD transport family E5E96_20045 PF01032 FecCD transport family E5E96_20050 PF00005 ABC transporter E5E96_20055 PF17837 4'-phosphopantetheinyl transferase N-terminal domain E5E96_20055 PF01648 4'-phosphopantetheinyl transferase superfamily E5E96_20060 PF01497 Periplasmic binding protein E5E96_20065 PF00501 AMP-binding enzyme E5E96_20065 PF00975 Thioesterase domain E5E96_20065 PF13193 AMP-binding enzyme C-terminal domain E5E96_20065 PF00668 Condensation domain E5E96_20065 PF00550 Phosphopantetheine attachment site E5E96_20080 PF00975 Thioesterase domain E5E96_20080 PF00501 AMP-binding enzyme E5E96_20080 PF13193 AMP-binding enzyme C-terminal domain E5E96_20080 PF00668 Condensation domain E5E96_20080 PF00550 Phosphopantetheine attachment site E5E96_20085 PF00550 Phosphopantetheine attachment site E5E96_20085 PF00857 Isochorismatase family E5E96_20090 PF13193 AMP-binding enzyme C-terminal domain E5E96_20090 PF00501 AMP-binding enzyme E5E96_20095 PF00425 chorismate binding enzyme E5E96_20100 PF07273 Protein of unknown function (DUF1439) E5E96_20110 PF00483 Nucleotidyl transferase E5E96_20115 PF03707 Bacterial signalling protein N terminal repeat E5E96_20115 PF00990 Diguanylate cyclase, GGDEF domain E5E96_20115 PF00563 EAL domain E5E96_20130 PF00294 pfkB family carbohydrate kinase E5E96_20135 PF01124 MAPEG family E5E96_20140 PF00762 Ferrochelatase E5E96_20145 PF05191 Adenylate kinase, active site lid E5E96_20155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_20155 PF00183 Hsp90 protein E5E96_20165 PF02132 RecR protein E5E96_20165 PF13662 Toprim domain E5E96_20170 PF02634 FdhD/NarQ family E5E96_20175 PF01590 GAF domain E5E96_20175 PF02954 Bacterial regulatory protein, Fis family E5E96_20175 PF00158 Sigma-54 interaction domain E5E96_20190 PF12800 4Fe-4S binding domain E5E96_20190 PF13247 4Fe-4S dicluster domain E5E96_20200 PF02705 K+ potassium transporter E5E96_20205 PF12798 4Fe-4S binding domain E5E96_20205 PF00037 4Fe-4S binding domain E5E96_20210 PF00361 Proton-conducting membrane transporter E5E96_20215 PF00146 NADH dehydrogenase E5E96_20220 PF00374 Nickel-dependent hydrogenase E5E96_20220 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E5E96_20220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E5E96_20225 PF12838 4Fe-4S dicluster domain E5E96_20230 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E5E96_20235 PF07450 Formate hydrogenlyase maturation protein HycH E5E96_20245 PF03841 L-seryl-tRNA selenium transferase E5E96_20245 PF12390 Selenocysteine synthase N terminal E5E96_20250 PF00009 Elongation factor Tu GTP binding domain E5E96_20250 PF03144 Elongation factor Tu domain 2 E5E96_20250 PF09105 Elongation factor SelB, winged helix E5E96_20250 PF09106 Elongation factor SelB, winged helix E5E96_20250 PF09107 Elongation factor SelB, winged helix E5E96_20255 PF07503 HypF finger E5E96_20255 PF01300 Telomere recombination E5E96_20255 PF00708 Acylphosphatase E5E96_20255 PF17788 HypF Kae1-like domain E5E96_20260 PF01455 HupF/HypC family E5E96_20265 PF01924 Hydrogenase formation hypA family E5E96_20270 PF00586 AIR synthase related protein, N-terminal domain E5E96_20270 PF02769 AIR synthase related protein, C-terminal domain E5E96_20275 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E5E96_20280 PF02492 CobW/HypB/UreG, nucleotide-binding domain E5E96_20285 PF08402 TOBE domain E5E96_20285 PF00005 ABC transporter E5E96_20295 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_20295 PF12911 N-terminal TM domain of oligopeptide transport permease C E5E96_20300 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_20305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_20310 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE E5E96_20315 PF01750 Hydrogenase maturation protease E5E96_20320 PF00374 Nickel-dependent hydrogenase E5E96_20325 PF03916 Polysulphide reductase, NrfD E5E96_20330 PF13247 4Fe-4S dicluster domain E5E96_20335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E5E96_20335 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E5E96_20340 PF00158 Sigma-54 interaction domain E5E96_20340 PF02954 Bacterial regulatory protein, Fis family E5E96_20340 PF00072 Response regulator receiver domain E5E96_20350 PF02895 Signal transducing histidine kinase, homodimeric domain E5E96_20350 PF01584 CheW-like domain E5E96_20350 PF01627 Hpt domain E5E96_20350 PF09078 CheY binding E5E96_20350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_20355 PF00672 HAMP domain E5E96_20355 PF17202 Single cache domain 3 E5E96_20355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_20360 PF01584 CheW-like domain E5E96_20365 PF01739 CheR methyltransferase, SAM binding domain E5E96_20365 PF03705 CheR methyltransferase, all-alpha domain E5E96_20370 PF00072 Response regulator receiver domain E5E96_20370 PF01339 CheB methylesterase E5E96_20375 PF00563 EAL domain E5E96_20375 PF03707 Bacterial signalling protein N terminal repeat E5E96_20375 PF00990 Diguanylate cyclase, GGDEF domain E5E96_20380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_20380 PF12729 Four helix bundle sensory module for signal transduction E5E96_20380 PF00672 HAMP domain E5E96_20385 PF00842 Alanine racemase, C-terminal domain E5E96_20385 PF01168 Alanine racemase, N-terminal domain E5E96_20410 PF00916 Sulfate permease family E5E96_20410 PF01740 STAS domain E5E96_20425 PF03350 Uncharacterized protein family, UPF0114 E5E96_20440 PF03239 Iron permease FTR1 family E5E96_20445 PF01593 Flavin containing amine oxidoreductase E5E96_20460 PF07690 Major Facilitator Superfamily E5E96_20505 PF02913 FAD linked oxidases, C-terminal domain E5E96_20505 PF01565 FAD binding domain E5E96_20510 PF02589 LUD domain E5E96_20515 PF02589 LUD domain E5E96_20515 PF11870 Domain of unknown function (DUF3390) E5E96_20515 PF13183 4Fe-4S dicluster domain E5E96_20520 PF02754 Cysteine-rich domain E5E96_20525 PF02652 L-lactate permease E5E96_20530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E5E96_20530 PF03466 LysR substrate binding domain E5E96_20540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E5E96_20545 PF00561 alpha/beta hydrolase fold E5E96_20570 PF01625 Peptide methionine sulfoxide reductase E5E96_20575 PF00696 Amino acid kinase family E5E96_20575 PF00583 Acetyltransferase (GNAT) family E5E96_20580 PF01842 ACT domain E5E96_20580 PF00696 Amino acid kinase family E5E96_20590 PF00884 Sulfatase E5E96_20595 PF17676 LD-carboxypeptidase C-terminal domain E5E96_20595 PF02016 LD-carboxypeptidase N-terminal domain E5E96_20600 PF01734 Patatin-like phospholipase E5E96_20610 PF01906 Putative heavy-metal-binding E5E96_20630 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_20635 PF05728 Uncharacterised protein family (UPF0227) E5E96_20640 PF00860 Permease family E5E96_20645 PF08439 Oligopeptidase F E5E96_20645 PF01432 Peptidase family M3 E5E96_20650 PF08439 Oligopeptidase F E5E96_20650 PF01432 Peptidase family M3 E5E96_20665 PF02355 Protein export membrane protein E5E96_20665 PF07549 SecD/SecF GG Motif E5E96_20670 PF07549 SecD/SecF GG Motif E5E96_20670 PF02355 Protein export membrane protein E5E96_20670 PF13721 SecD export protein N-terminal TM region E5E96_20705 PF01230 HIT domain E5E96_20710 PF00672 HAMP domain E5E96_20710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_20720 PF01979 Amidohydrolase family E5E96_20735 PF00375 Sodium:dicarboxylate symporter family E5E96_20745 PF01168 Alanine racemase, N-terminal domain E5E96_20745 PF00842 Alanine racemase, C-terminal domain E5E96_20750 PF03741 Integral membrane protein TerC family E5E96_20755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E5E96_20755 PF00005 ABC transporter E5E96_20760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E5E96_20760 PF00005 ABC transporter E5E96_20765 PF12911 N-terminal TM domain of oligopeptide transport permease C E5E96_20765 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_20770 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_20775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_20780 PF01914 MarC family integral membrane protein E5E96_20790 PF00171 Aldehyde dehydrogenase family E5E96_20790 PF00465 Iron-containing alcohol dehydrogenase E5E96_20795 PF01966 HD domain E5E96_20800 PF07694 5TMR of 5TMR-LYT E5E96_20800 PF06580 Histidine kinase E5E96_20805 PF04397 LytTr DNA-binding domain E5E96_20805 PF00072 Response regulator receiver domain E5E96_20810 PF02554 Carbon starvation protein CstA E5E96_20815 PF11742 Protein of unknown function (DUF3302) E5E96_20820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E5E96_20820 PF00529 HlyD membrane-fusion protein of T1SS E5E96_20825 PF00271 Helicase conserved C-terminal domain E5E96_20825 PF04851 Type III restriction enzyme, res subunit E5E96_20830 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E5E96_20835 PF00462 Glutaredoxin E5E96_20845 PF00155 Aminotransferase class I and II E5E96_20850 PF03606 C4-dicarboxylate anaerobic carrier E5E96_20855 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E5E96_20855 PF12241 Trans-2-enoyl-CoA reductase catalytic region E5E96_20855 PF07055 Enoyl reductase FAD binding domain E5E96_20930 PF10124 Mu-like prophage major head subunit gpT E5E96_20935 PF10123 Mu-like prophage I protein E5E96_20940 PF00360 Phytochrome region E5E96_20940 PF00990 Diguanylate cyclase, GGDEF domain E5E96_20940 PF00563 EAL domain E5E96_20940 PF01590 GAF domain E5E96_20960 PF06074 Protein of unknown function (DUF935) E5E96_20970 PF11985 Protein of unknown function (DUF3486) E5E96_20975 PF08461 Ribonuclease R winged-helix domain E5E96_21085 PF01381 Helix-turn-helix E5E96_21085 PF00717 Peptidase S24-like E5E96_21100 PF00892 EamA-like transporter family E5E96_21105 PF02508 Rnf-Nqr subunit, membrane protein E5E96_21110 PF04060 Putative Fe-S cluster E5E96_21115 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E5E96_21115 PF12838 4Fe-4S dicluster domain E5E96_21115 PF13375 RnfC Barrel sandwich hybrid domain E5E96_21115 PF10531 SLBB domain E5E96_21120 PF03116 NQR2, RnfD, RnfE family E5E96_21125 PF04205 FMN-binding domain E5E96_21130 PF02508 Rnf-Nqr subunit, membrane protein E5E96_21135 PF10576 Iron-sulfur binding domain of endonuclease III E5E96_21135 PF00633 Helix-hairpin-helix motif E5E96_21135 PF00730 HhH-GPD superfamily base excision DNA repair protein E5E96_21140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E5E96_21145 PF18393 MotY N-terminal domain E5E96_21145 PF00691 OmpA family E5E96_21150 PF12729 Four helix bundle sensory module for signal transduction E5E96_21150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_21150 PF00672 HAMP domain E5E96_21155 PF00929 Exonuclease E5E96_21160 PF03553 Na+/H+ antiporter family E5E96_21160 PF13726 Na+-H+ antiporter family E5E96_21165 PF00271 Helicase conserved C-terminal domain E5E96_21165 PF00270 DEAD/DEAH box helicase E5E96_21165 PF03880 DbpA RNA binding domain E5E96_21170 PF03061 Thioesterase superfamily E5E96_21180 PF01565 FAD binding domain E5E96_21180 PF13183 4Fe-4S dicluster domain E5E96_21180 PF02913 FAD linked oxidases, C-terminal domain E5E96_21190 PF03471 Transporter associated domain E5E96_21190 PF03741 Integral membrane protein TerC family E5E96_21195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E5E96_21200 PF00962 Adenosine/AMP deaminase E5E96_21205 PF13344 Haloacid dehalogenase-like hydrolase E5E96_21210 PF00999 Sodium/hydrogen exchanger family E5E96_21210 PF02254 TrkA-N domain E5E96_21220 PF00733 Asparagine synthase E5E96_21220 PF13537 Glutamine amidotransferase domain E5E96_21230 PF13417 Glutathione S-transferase, N-terminal domain E5E96_21230 PF00043 Glutathione S-transferase, C-terminal domain E5E96_21235 PF14497 Glutathione S-transferase, C-terminal domain E5E96_21235 PF02798 Glutathione S-transferase, N-terminal domain E5E96_21245 PF04209 homogentisate 1,2-dioxygenase E5E96_21250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E5E96_21260 PF00849 RNA pseudouridylate synthase E5E96_21265 PF13426 PAS domain E5E96_21265 PF00563 EAL domain E5E96_21265 PF00990 Diguanylate cyclase, GGDEF domain E5E96_21270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_21270 PF08447 PAS fold E5E96_21280 PF09924 Uncharacterised conserved protein (DUF2156) E5E96_21280 PF03706 Lysylphosphatidylglycerol synthase TM region E5E96_21290 PF00884 Sulfatase E5E96_21290 PF08019 Phosphoethanolamine transferase EptA/EptB E5E96_21305 PF02108 Flagellar assembly protein FliH E5E96_21315 PF01514 Secretory protein of YscJ/FliF family E5E96_21320 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI E5E96_21325 PF09025 YopR, type III needle-polymerisation regulator E5E96_21330 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) E5E96_21335 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF E5E96_21345 PF16697 Inner membrane component of T3SS, cytoplasmic domain E5E96_21345 PF16693 Inner membrane component of T3SS, periplasmic domain E5E96_21350 PF03958 Bacterial type II/III secretion system short domain E5E96_21350 PF00263 Bacterial type II and III secretion system protein E5E96_21365 PF12833 Helix-turn-helix domain E5E96_21380 PF05932 Tir chaperone protein (CesT) family E5E96_21385 PF05844 YopD protein E5E96_21390 PF04888 Secretion system effector C (SseC) like family E5E96_21395 PF07720 Tetratricopeptide repeat E5E96_21400 PF04792 V antigen (LcrV) protein E5E96_21410 PF09621 Type III secretion system regulator (LcrR) E5E96_21415 PF00771 FHIPEP family E5E96_21425 PF09474 Type III secretion system YscX (type_III_YscX) E5E96_21435 PF09059 TyeA E5E96_21440 PF07201 HrpJ-like domain E5E96_21445 PF18269 T3SS EscN ATPase C-terminal domain E5E96_21445 PF02874 ATP synthase alpha/beta family, beta-barrel domain E5E96_21445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E5E96_21455 PF02120 Flagellar hook-length control protein FliK E5E96_21460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E5E96_21465 PF00813 FliP family E5E96_21470 PF01313 Bacterial export proteins, family 3 E5E96_21475 PF01311 Bacterial export proteins, family 1 E5E96_21480 PF01312 FlhB HrpN YscU SpaS Family E5E96_21500 PF02342 TerD domain E5E96_21510 PF02342 TerD domain E5E96_21515 PF02342 TerD domain E5E96_21520 PF03741 Integral membrane protein TerC family E5E96_21525 PF05099 Tellurite resistance protein TerB E5E96_21530 PF02342 TerD domain E5E96_21535 PF02342 TerD domain E5E96_21555 PF15608 PELOTA RNA binding domain E5E96_21555 PF11202 Phosphoribosyl transferase (PRTase) E5E96_21605 PF05598 Transposase domain (DUF772) E5E96_21605 PF01609 Transposase DDE domain E5E96_21630 PF01027 Inhibitor of apoptosis-promoting Bax1 E5E96_21635 PF12805 FUSC-like inner membrane protein yccS E5E96_21640 PF04358 DsrC like protein E5E96_21645 PF05036 Sporulation related domain E5E96_21650 PF08245 Mur ligase middle domain E5E96_21650 PF02875 Mur ligase family, glutamate ligase domain E5E96_21655 PF01039 Carboxyl transferase domain E5E96_21655 PF17848 Acetyl-coA carboxylase zinc finger domain E5E96_21660 PF01416 tRNA pseudouridine synthase E5E96_21670 PF01118 Semialdehyde dehydrogenase, NAD binding domain E5E96_21670 PF02774 Semialdehyde dehydrogenase, dimerisation domain E5E96_21675 PF11890 Domain of unknown function (DUF3410) E5E96_21675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E5E96_21675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E5E96_21680 PF01569 PAP2 superfamily E5E96_21685 PF03180 NLPA lipoprotein E5E96_21695 PF00082 Subtilase family E5E96_21695 PF01483 Proprotein convertase P-domain E5E96_21705 PF14310 Fibronectin type III-like domain E5E96_21705 PF00933 Glycosyl hydrolase family 3 N terminal domain E5E96_21705 PF01915 Glycosyl hydrolase family 3 C-terminal domain E5E96_21715 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E5E96_21715 PF02896 PEP-utilising enzyme, TIM barrel domain E5E96_21715 PF00391 PEP-utilising enzyme, mobile domain E5E96_21720 PF03618 Kinase/pyrophosphorylase E5E96_21730 PF00324 Amino acid permease E5E96_21770 PF00664 ABC transporter transmembrane region E5E96_21770 PF00005 ABC transporter E5E96_21770 PF03412 Peptidase C39 family E5E96_21775 PF16199 Radical_SAM C-terminal domain E5E96_21775 PF04055 Radical SAM superfamily E5E96_21780 PF00310 Glutamine amidotransferases class-II E5E96_21780 PF01493 GXGXG motif E5E96_21780 PF04898 Glutamate synthase central domain E5E96_21780 PF01645 Conserved region in glutamate synthase E5E96_21785 PF07992 Pyridine nucleotide-disulphide oxidoreductase E5E96_21785 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E5E96_21795 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_21800 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_21815 PF09278 MerR, DNA binding E5E96_21815 PF00376 MerR family regulatory protein E5E96_21830 PF14521 Lysine-specific metallo-endopeptidase E5E96_21840 PF00271 Helicase conserved C-terminal domain E5E96_21840 PF00270 DEAD/DEAH box helicase E5E96_21845 PF13302 Acetyltransferase (GNAT) domain E5E96_21865 PF08378 Nuclease-related domain E5E96_21875 PF07759 Protein of unknown function (DUF1615) E5E96_21880 PF08502 LeuA allosteric (dimerisation) domain E5E96_21880 PF00682 HMGL-like E5E96_21885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E5E96_21885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E5E96_21885 PF02142 MGS-like domain E5E96_21890 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E5E96_21890 PF00117 Glutamine amidotransferase class-I E5E96_21895 PF01113 Dihydrodipicolinate reductase, N-terminus E5E96_21895 PF05173 Dihydrodipicolinate reductase, C-terminus E5E96_21905 PF01812 5-formyltetrahydrofolate cyclo-ligase family E5E96_21910 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E5E96_21915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E5E96_21915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E5E96_21915 PF01842 ACT domain E5E96_21920 PF01219 Prokaryotic diacylglycerol kinase E5E96_21925 PF00793 DAHP synthetase I family E5E96_21930 PF00583 Acetyltransferase (GNAT) family E5E96_21935 PF00005 ABC transporter E5E96_21940 PF01032 FecCD transport family E5E96_21945 PF00989 PAS fold E5E96_21945 PF00072 Response regulator receiver domain E5E96_21945 PF00497 Bacterial extracellular solute-binding proteins, family 3 E5E96_21945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_21945 PF00512 His Kinase A (phospho-acceptor) domain E5E96_21945 PF01627 Hpt domain E5E96_21955 PF00437 Type II/IV secretion system protein E5E96_21960 PF00483 Nucleotidyl transferase E5E96_21975 PF07664 Ferrous iron transport protein B C terminus E5E96_21975 PF07670 Nucleoside recognition E5E96_21975 PF02421 Ferrous iron transport protein B E5E96_21985 PF01253 Translation initiation factor SUI1 E5E96_21990 PF01169 Uncharacterized protein family UPF0016 E5E96_22020 PF00990 Diguanylate cyclase, GGDEF domain E5E96_22020 PF13185 GAF domain E5E96_22040 PF07179 SseB protein N-terminal domain E5E96_22040 PF14581 SseB protein C-terminal domain E5E96_22045 PF01406 tRNA synthetases class I (C) catalytic domain E5E96_22045 PF09190 DALR domain E5E96_22050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E5E96_22060 PF00149 Calcineurin-like phosphoesterase E5E96_22065 PF03916 Polysulphide reductase, NrfD E5E96_22070 PF13247 4Fe-4S dicluster domain E5E96_22070 PF00037 4Fe-4S binding domain E5E96_22090 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E5E96_22095 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB E5E96_22105 PF13426 PAS domain E5E96_22105 PF08447 PAS fold E5E96_22105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E5E96_22120 PF00884 Sulfatase E5E96_22125 PF00717 Peptidase S24-like E5E96_22150 PF01066 CDP-alcohol phosphatidyltransferase E5E96_22160 PF00196 Bacterial regulatory proteins, luxR family E5E96_22160 PF00072 Response regulator receiver domain E5E96_22165 PF02348 Cytidylyltransferase E5E96_22170 PF03966 Trm112p-like protein E5E96_22175 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E5E96_22180 PF00005 ABC transporter E5E96_22180 PF00664 ABC transporter transmembrane region E5E96_22185 PF00753 Metallo-beta-lactamase superfamily E5E96_22185 PF03772 Competence protein E5E96_22200 PF05872 Bacterial protein of unknown function (DUF853) E5E96_22205 PF06291 Bor protein E5E96_22210 PF06291 Bor protein E5E96_22220 PF06406 StbA protein E5E96_22225 PF00561 alpha/beta hydrolase fold E5E96_22230 PF03459 TOBE domain E5E96_22230 PF00005 ABC transporter E5E96_22235 PF00528 Binding-protein-dependent transport system inner membrane component E5E96_22245 PF02391 MoaE protein E5E96_22250 PF02597 ThiS family E5E96_22255 PF01967 MoaC family E5E96_22260 PF00994 Probable molybdopterin binding domain E5E96_22265 PF03264 NapC/NirT cytochrome c family, N-terminal region E5E96_22270 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E5E96_22275 PF12801 4Fe-4S binding domain E5E96_22275 PF13237 4Fe-4S dicluster domain E5E96_22280 PF12838 4Fe-4S dicluster domain E5E96_22280 PF12800 4Fe-4S binding domain E5E96_22285 PF01568 Molydopterin dinucleotide binding domain E5E96_22285 PF00384 Molybdopterin oxidoreductase E5E96_22285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E5E96_22285 PF10518 TAT (twin-arginine translocation) pathway signal sequence E5E96_22295 PF13187 4Fe-4S dicluster domain E5E96_22295 PF12800 4Fe-4S binding domain E5E96_22295 PF00037 4Fe-4S binding domain E5E96_22300 PF06463 Molybdenum Cofactor Synthesis C E5E96_22300 PF04055 Radical SAM superfamily E5E96_22310 PF00072 Response regulator receiver domain E5E96_22310 PF00196 Bacterial regulatory proteins, luxR family E5E96_22320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E5E96_22320 PF00512 His Kinase A (phospho-acceptor) domain E5E96_22320 PF09456 RcsC Alpha-Beta-Loop (ABL) E5E96_22320 PF00072 Response regulator receiver domain E5E96_22330 PF01933 Uncharacterised protein family UPF0052 E5E96_22340 PF13230 Glutamine amidotransferases class-II E5E96_22345 PF13580 SIS domain E5E96_22350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E5E96_22350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E5E96_22350 PF02770 Acyl-CoA dehydrogenase, middle domain E5E96_22350 PF09317 Domain of unknown function (DUF1974) E5E96_22360 PF11849 Domain of unknown function (DUF3369) E5E96_22365 PF01769 Divalent cation transporter E5E96_22365 PF00571 CBS domain E5E96_22365 PF03448 MgtE intracellular N domain E5E96_22380 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E5E96_22380 PF10135 Rod binding protein E5E96_22385 PF02119 Flagellar P-ring protein E5E96_22390 PF02107 Flagellar L-ring protein E5E96_22395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_22395 PF00460 Flagella basal body rod protein E5E96_22400 PF00460 Flagella basal body rod protein E5E96_22400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_22405 PF07559 Flagellar basal body protein FlaE E5E96_22405 PF00460 Flagella basal body rod protein E5E96_22405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_22415 PF00460 Flagella basal body rod protein E5E96_22415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E5E96_22420 PF00460 Flagella basal body rod protein E5E96_22425 PF01739 CheR methyltransferase, SAM binding domain E5E96_22425 PF03705 CheR methyltransferase, all-alpha domain E5E96_22430 PF01584 CheW-like domain E5E96_22430 PF00072 Response regulator receiver domain E5E96_22435 PF13144 Chaperone for flagella basal body P-ring formation E5E96_22450 PF12850 Calcineurin-like phosphoesterase superfamily domain E5E96_22455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_22465 PF00849 RNA pseudouridylate synthase E5E96_22465 PF01479 S4 domain E5E96_22470 PF11871 Domain of unknown function (DUF3391) E5E96_22470 PF01966 HD domain E5E96_22480 PF00923 Transaldolase/Fructose-6-phosphate aldolase E5E96_22485 PF04055 Radical SAM superfamily E5E96_22490 PF01228 Glycine radical E5E96_22490 PF02901 Pyruvate formate lyase-like E5E96_22495 PF08220 DeoR-like helix-turn-helix domain E5E96_22495 PF00455 DeoR C terminal sensor domain E5E96_22500 PF00892 EamA-like transporter family E5E96_22505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E5E96_22530 PF00313 'Cold-shock' DNA-binding domain E5E96_22535 PF02817 e3 binding domain E5E96_22535 PF00364 Biotin-requiring enzyme E5E96_22535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E5E96_22540 PF02780 Transketolase, C-terminal domain E5E96_22540 PF02779 Transketolase, pyrimidine binding domain E5E96_22545 PF00676 Dehydrogenase E1 component E5E96_22550 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E5E96_22560 PF05472 DNA replication terminus site-binding protein (Ter protein) E5E96_22565 PF00271 Helicase conserved C-terminal domain E5E96_22565 PF04434 SWIM zinc finger E5E96_22565 PF00176 SNF2 family N-terminal domain E5E96_22570 PF04337 Protein of unknown function, DUF480 E5E96_22580 PF02706 Chain length determinant protein E5E96_22585 PF04321 RmlD substrate binding domain E5E96_22590 PF02397 Bacterial sugar transferase E5E96_22595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E5E96_22595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E5E96_22595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E5E96_22595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E5E96_22600 PF00483 Nucleotidyl transferase E5E96_22600 PF01050 Mannose-6-phosphate isomerase E5E96_22610 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_22630 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_22635 PF00132 Bacterial transferase hexapeptide (six repeats) E5E96_22650 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E5E96_22655 PF00483 Nucleotidyl transferase E5E96_22660 PF16363 GDP-mannose 4,6 dehydratase E5E96_22665 PF02321 Outer membrane efflux protein