locus-tag class description C2U39_00005 PF00356 Bacterial regulatory proteins, lacI family C2U39_00010 PF16353 Domain of unknown function(DUF4981) C2U39_00010 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2U39_00010 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2U39_00010 PF02929 Beta galactosidase small chain C2U39_00010 PF00703 Glycosyl hydrolases family 2 C2U39_00015 PF04074 YhcH/YjgK/YiaL C2U39_00020 PF13520 Amino acid permease C2U39_00025 PF01588 Putative tRNA binding domain C2U39_00030 PF13520 Amino acid permease C2U39_00035 PF13593 SBF-like CPA transporter family (DUF4137) C2U39_00040 PF03781 Sulfatase-modifying factor enzyme 1 C2U39_00040 PF12867 DinB superfamily C2U39_00055 PF00756 Putative esterase C2U39_00060 PF00107 Zinc-binding dehydrogenase C2U39_00060 PF08240 Alcohol dehydrogenase GroES-like domain C2U39_00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_00065 PF03466 LysR substrate binding domain C2U39_00090 PF13361 UvrD-like helicase C-terminal domain C2U39_00090 PF00580 UvrD/REP helicase N-terminal domain C2U39_00130 PF09299 Mu transposase, C-terminal C2U39_00130 PF02914 Bacteriophage Mu transposase C2U39_00130 PF09039 Mu DNA binding, I gamma subdomain C2U39_00130 PF02316 Mu DNA-binding domain C2U39_00135 PF09077 Mu B transposition protein, C terminal C2U39_00135 PF13401 AAA domain C2U39_00245 PF08461 Ribonuclease R winged-helix domain C2U39_00255 PF11985 Protein of unknown function (DUF3486) C2U39_00260 PF03237 Terminase-like family C2U39_00265 PF06074 Protein of unknown function (DUF935) C2U39_00280 PF10124 Mu-like prophage major head subunit gpT C2U39_00325 PF04984 Phage tail sheath protein subtilisin-like domain C2U39_00325 PF17482 Phage tail sheath C-terminal domain C2U39_00355 PF06890 Bacteriophage Mu Gp45 protein C2U39_00365 PF04865 Baseplate J-like protein C2U39_00380 PF03466 LysR substrate binding domain C2U39_00380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_00395 PF14001 YdfZ protein C2U39_00415 PF03466 LysR substrate binding domain C2U39_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_00420 PF01810 LysE type translocator C2U39_00425 PF06206 CpeT/CpcT family (DUF1001) C2U39_00430 PF01810 LysE type translocator C2U39_00435 PF12833 Helix-turn-helix domain C2U39_00440 PF00892 EamA-like transporter family C2U39_00445 PF00171 Aldehyde dehydrogenase family C2U39_00450 PF01381 Helix-turn-helix C2U39_00450 PF07883 Cupin domain C2U39_00455 PF00202 Aminotransferase class-III C2U39_00460 PF00171 Aldehyde dehydrogenase family C2U39_00465 PF00117 Glutamine amidotransferase class-I C2U39_00465 PF00958 GMP synthase C terminal domain C2U39_00465 PF02540 NAD synthase C2U39_00470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_00470 PF03466 LysR substrate binding domain C2U39_00475 PF00294 pfkB family carbohydrate kinase C2U39_00480 PF02082 Transcriptional regulator C2U39_00495 PF02646 RmuC family C2U39_00500 PF02386 Cation transport protein C2U39_00505 PF02254 TrkA-N domain C2U39_00505 PF02080 TrkA-C domain C2U39_00510 PF01189 16S rRNA methyltransferase RsmB/F C2U39_00510 PF01029 NusB family C2U39_00515 PF00551 Formyl transferase C2U39_00515 PF02911 Formyl transferase, C-terminal domain C2U39_00520 PF01327 Polypeptide deformylase C2U39_00530 PF17782 DprA winged helix domain C2U39_00530 PF02481 DNA recombination-mediator protein A C2U39_00535 PF04361 Protein of unknown function (DUF494) C2U39_00540 PF01396 Topoisomerase DNA binding C4 zinc finger C2U39_00545 PF01300 Telomere recombination C2U39_00550 PF01218 Coproporphyrinogen III oxidase C2U39_00555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C2U39_00555 PF01488 Shikimate / quinate 5-dehydrogenase C2U39_00555 PF08501 Shikimate dehydrogenase substrate binding domain C2U39_00560 PF01609 Transposase DDE domain C2U39_00570 PF01926 50S ribosome-binding GTPase C2U39_00575 PF00034 Cytochrome c C2U39_00580 PF04220 Der GTPase activator (YihI) C2U39_00585 PF10675 Protein of unknown function (DUF2489) C2U39_00590 PF04055 Radical SAM superfamily C2U39_00590 PF06969 HemN C-terminal domain C2U39_00595 PF00962 Adenosine/AMP deaminase C2U39_00600 PF00072 Response regulator receiver domain C2U39_00600 PF02954 Bacterial regulatory protein, Fis family C2U39_00600 PF00158 Sigma-54 interaction domain C2U39_00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_00605 PF00989 PAS fold C2U39_00605 PF00512 His Kinase A (phospho-acceptor) domain C2U39_00615 PF03951 Glutamine synthetase, beta-Grasp domain C2U39_00615 PF00120 Glutamine synthetase, catalytic domain C2U39_00625 PF03631 Virulence factor BrkB C2U39_00630 PF02580 D-Tyr-tRNA(Tyr) deacylase C2U39_00640 PF00583 Acetyltransferase (GNAT) family C2U39_00640 PF09500 Putative thioesterase (yiiD_Cterm) C2U39_00650 PF17191 RecG wedge domain C2U39_00650 PF00270 DEAD/DEAH box helicase C2U39_00650 PF00271 Helicase conserved C-terminal domain C2U39_00655 PF13091 PLD-like domain C2U39_00660 PF02447 GntP family permease C2U39_00665 PF01202 Shikimate kinase C2U39_00670 PF00920 Dehydratase family C2U39_00675 PF01081 KDPG and KHG aldolase C2U39_00690 PF00356 Bacterial regulatory proteins, lacI family C2U39_00690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U39_00700 PF01551 Peptidase family M23 C2U39_00705 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C2U39_00705 PF01676 Metalloenzyme superfamily C2U39_00710 PF00581 Rhodanese-like domain C2U39_00715 PF02556 Preprotein translocase subunit SecB C2U39_00720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C2U39_00720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C2U39_00725 PF01521 Iron-sulphur cluster biosynthesis C2U39_00725 PF01106 NifU-like domain C2U39_00730 PF00156 Phosphoribosyl transferase domain C2U39_00735 PF00561 alpha/beta hydrolase fold C2U39_00750 PF17674 HHH domain C2U39_00750 PF09371 Tex-like protein N-terminal domain C2U39_00750 PF16921 Tex protein YqgF-like domain C2U39_00750 PF00575 S1 RNA binding domain C2U39_00755 PF03449 Transcription elongation factor, N-terminal C2U39_00755 PF01272 Transcription elongation factor, GreA/GreB, C-term C2U39_00760 PF00072 Response regulator receiver domain C2U39_00760 PF00486 Transcriptional regulatory protein, C terminal C2U39_00765 PF00512 His Kinase A (phospho-acceptor) domain C2U39_00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_00765 PF00672 HAMP domain C2U39_00775 PF00338 Ribosomal protein S10p/S20e C2U39_00780 PF00297 Ribosomal protein L3 C2U39_00785 PF00573 Ribosomal protein L4/L1 family C2U39_00790 PF00276 Ribosomal protein L23 C2U39_00795 PF00181 Ribosomal Proteins L2, RNA binding domain C2U39_00795 PF03947 Ribosomal Proteins L2, C-terminal domain C2U39_00800 PF00203 Ribosomal protein S19 C2U39_00805 PF00237 Ribosomal protein L22p/L17e C2U39_00810 PF07650 KH domain C2U39_00810 PF00189 Ribosomal protein S3, C-terminal domain C2U39_00815 PF00252 Ribosomal protein L16p/L10e C2U39_00820 PF00831 Ribosomal L29 protein C2U39_00825 PF00366 Ribosomal protein S17 C2U39_00830 PF00238 Ribosomal protein L14p/L23e C2U39_00835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C2U39_00835 PF00467 KOW motif C2U39_00840 PF00281 Ribosomal protein L5 C2U39_00840 PF00673 ribosomal L5P family C-terminus C2U39_00845 PF00253 Ribosomal protein S14p/S29e C2U39_00850 PF00410 Ribosomal protein S8 C2U39_00855 PF00347 Ribosomal protein L6 C2U39_00860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C2U39_00865 PF03719 Ribosomal protein S5, C-terminal domain C2U39_00865 PF00333 Ribosomal protein S5, N-terminal domain C2U39_00870 PF00327 Ribosomal protein L30p/L7e C2U39_00875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C2U39_00880 PF00344 SecY translocase C2U39_00885 PF00444 Ribosomal protein L36 C2U39_00890 PF00416 Ribosomal protein S13/S18 C2U39_00895 PF00411 Ribosomal protein S11 C2U39_00900 PF00163 Ribosomal protein S4/S9 N-terminal domain C2U39_00900 PF01479 S4 domain C2U39_00905 PF01000 RNA polymerase Rpb3/RpoA insert domain C2U39_00905 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C2U39_00905 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C2U39_00910 PF01196 Ribosomal protein L17 C2U39_00970 PF00999 Sodium/hydrogen exchanger family C2U39_00970 PF02254 TrkA-N domain C2U39_00975 PF02525 Flavodoxin-like fold C2U39_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_00980 PF03466 LysR substrate binding domain C2U39_00985 PF00106 short chain dehydrogenase C2U39_01000 PF00326 Prolyl oligopeptidase family C2U39_01000 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2U39_01005 PF16868 NMT1-like family C2U39_01020 PF07947 YhhN family C2U39_01025 PF07690 Major Facilitator Superfamily C2U39_01030 PF13533 Biotin-lipoyl like C2U39_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_01035 PF03466 LysR substrate binding domain C2U39_01045 PF00375 Sodium:dicarboxylate symporter family C2U39_01050 PF10678 Protein of unknown function (DUF2492) C2U39_01055 PF01914 MarC family integral membrane protein C2U39_01060 PF03466 LysR substrate binding domain C2U39_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_01065 PF02416 mttA/Hcf106 family C2U39_01075 PF01464 Transglycosylase SLT domain C2U39_01075 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_01080 PF13091 PLD-like domain C2U39_01090 PF00440 Bacterial regulatory proteins, tetR family C2U39_01095 PF07226 Protein of unknown function (DUF1422) C2U39_01110 PF00448 SRP54-type protein, GTPase domain C2U39_01110 PF02881 SRP54-type protein, helical bundle domain C2U39_01115 PF00005 ABC transporter C2U39_01120 PF18075 FtsX extracellular domain C2U39_01125 PF04542 Sigma-70 region 2 C2U39_01125 PF00140 Sigma-70 factor, region 1.2 C2U39_01125 PF04545 Sigma-70, region 4 C2U39_01130 PF00484 Carbonic anhydrase C2U39_01135 PF00392 Bacterial regulatory proteins, gntR family C2U39_01135 PF07702 UTRA domain C2U39_01140 PF01979 Amidohydrolase family C2U39_01145 PF00491 Arginase family C2U39_01150 PF17392 Urocanase C-terminal domain C2U39_01150 PF01175 Urocanase Rossmann-like domain C2U39_01150 PF17391 Urocanase N-terminal domain C2U39_01155 PF00221 Aromatic amino acid lyase C2U39_01160 PF01699 Sodium/calcium exchanger protein C2U39_01165 PF00563 EAL domain C2U39_01165 PF12792 CSS motif domain associated with EAL C2U39_01200 PF03958 Bacterial type II/III secretion system short domain C2U39_01200 PF00263 Bacterial type II and III secretion system protein C2U39_01215 PF00437 Type II/IV secretion system protein C2U39_01220 PF00482 Type II secretion system (T2SS), protein F C2U39_01235 PF07963 Prokaryotic N-terminal methylation motif C2U39_01235 PF08334 Type II secretion system (T2SS), protein G C2U39_01240 PF07963 Prokaryotic N-terminal methylation motif C2U39_01240 PF00114 Pilin (bacterial filament) C2U39_01270 PF04085 rod shape-determining protein MreC C2U39_01275 PF04093 rod shape-determining protein MreD C2U39_01280 PF02545 Maf-like protein C2U39_01285 PF10150 Ribonuclease E/G family C2U39_01285 PF00575 S1 RNA binding domain C2U39_01290 PF13502 AsmA-like C-terminal region C2U39_01290 PF13116 Protein of unknown function C2U39_01295 PF00795 Carbon-nitrogen hydrolase C2U39_01300 PF01523 Putative modulator of DNA gyrase C2U39_01310 PF01914 MarC family integral membrane protein C2U39_01315 PF07690 Major Facilitator Superfamily C2U39_01325 PF04228 Putative neutral zinc metallopeptidase C2U39_01345 PF00999 Sodium/hydrogen exchanger family C2U39_01350 PF02607 B12 binding domain C2U39_01350 PF02965 Vitamin B12 dependent methionine synthase, activation domain C2U39_01350 PF00809 Pterin binding enzyme C2U39_01350 PF02574 Homocysteine S-methyltransferase C2U39_01350 PF02310 B12 binding domain C2U39_01360 PF08443 RimK-like ATP-grasp domain C2U39_01360 PF18030 RimK PreATP-grasp domain C2U39_01370 PF00486 Transcriptional regulatory protein, C terminal C2U39_01370 PF00072 Response regulator receiver domain C2U39_01385 PF01964 Radical SAM ThiC family C2U39_01385 PF13667 ThiC-associated domain C2U39_01390 PF02581 Thiamine monophosphate synthase C2U39_01395 PF00899 ThiF family C2U39_01405 PF05690 Thiazole biosynthesis protein ThiG C2U39_01410 PF04055 Radical SAM superfamily C2U39_01410 PF06968 Biotin and Thiamin Synthesis associated domain C2U39_01425 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_01430 PF13036 Peptidoglycan-synthase activator LpoB C2U39_01435 PF00990 Diguanylate cyclase, GGDEF domain C2U39_01440 PF06055 Exopolysaccharide synthesis, ExoD C2U39_01450 PF08803 Putative mono-oxygenase ydhR C2U39_01455 PF01638 HxlR-like helix-turn-helix C2U39_01470 PF00593 TonB dependent receptor C2U39_01470 PF07715 TonB-dependent Receptor Plug Domain C2U39_01485 PF08241 Methyltransferase domain C2U39_01495 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C2U39_01500 PF03692 Putative zinc- or iron-chelating domain C2U39_01505 PF07219 HemY protein N-terminus C2U39_01505 PF07719 Tetratricopeptide repeat C2U39_01510 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C2U39_01515 PF02602 Uroporphyrinogen-III synthase HemD C2U39_01520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C2U39_01520 PF03900 Porphobilinogen deaminase, C-terminal domain C2U39_01525 PF12633 Adenylate cyclase NT domain C2U39_01525 PF01295 Adenylate cyclase, class-I C2U39_01530 PF02230 Phospholipase/Carboxylesterase C2U39_01535 PF01491 Frataxin-like domain C2U39_01545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2U39_01545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U39_01550 PF01678 Diaminopimelate epimerase C2U39_01560 PF00589 Phage integrase family C2U39_01560 PF02899 Phage integrase, N-terminal SAM-like domain C2U39_01565 PF13419 Haloacid dehalogenase-like hydrolase C2U39_01575 PF07722 Peptidase C26 C2U39_01590 PF04307 LexA-binding, inner membrane-associated putative hydrolase C2U39_01595 PF00994 Probable molybdopterin binding domain C2U39_01595 PF02464 Competence-damaged protein C2U39_01605 PF04204 Homoserine O-succinyltransferase C2U39_01615 PF01037 Lrp/AsnC ligand binding domain C2U39_01620 PF00884 Sulfatase C2U39_01630 PF16657 Maltogenic Amylase, C-terminal domain C2U39_01630 PF02903 Alpha amylase, N-terminal ig-like domain C2U39_01630 PF00128 Alpha amylase, catalytic domain C2U39_01635 PF02308 MgtC family C2U39_01655 PF00106 short chain dehydrogenase C2U39_01670 PF00465 Iron-containing alcohol dehydrogenase C2U39_01680 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U39_01690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_01690 PF12793 Sugar transport-related sRNA regulator N-term C2U39_01710 PF00561 alpha/beta hydrolase fold C2U39_01720 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2U39_01720 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2U39_01725 PF02698 DUF218 domain C2U39_01730 PF01752 Collagenase C2U39_01730 PF08453 Peptidase family M9 N-terminal C2U39_01735 PF00501 AMP-binding enzyme C2U39_01735 PF13193 AMP-binding enzyme C-terminal domain C2U39_01740 PF13378 Enolase C-terminal domain-like C2U39_01745 PF00378 Enoyl-CoA hydratase/isomerase C2U39_01750 PF12697 Alpha/beta hydrolase family C2U39_01755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U39_01755 PF16582 Middle domain of thiamine pyrophosphate C2U39_01755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U39_01760 PF00425 chorismate binding enzyme C2U39_01765 PF01040 UbiA prenyltransferase family C2U39_01785 PF00271 Helicase conserved C-terminal domain C2U39_01785 PF00270 DEAD/DEAH box helicase C2U39_01785 PF03880 DbpA RNA binding domain C2U39_01800 PF07670 Nucleoside recognition C2U39_01800 PF01773 Na+ dependent nucleoside transporter N-terminus C2U39_01800 PF07662 Na+ dependent nucleoside transporter C-terminus C2U39_01815 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C2U39_01820 PF01544 CorA-like Mg2+ transporter protein C2U39_01835 PF03471 Transporter associated domain C2U39_01835 PF00999 Sodium/hydrogen exchanger family C2U39_01835 PF02080 TrkA-C domain C2U39_01840 PF05068 Mannitol repressor C2U39_01845 PF01232 Mannitol dehydrogenase Rossmann domain C2U39_01845 PF08125 Mannitol dehydrogenase C-terminal domain C2U39_01850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U39_01850 PF02378 Phosphotransferase system, EIIC C2U39_01850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U39_01855 PF08206 Ribonuclease B OB domain C2U39_01855 PF00773 RNB domain C2U39_01855 PF17876 Cold shock domain C2U39_01860 PF03466 LysR substrate binding domain C2U39_01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_01865 PF00765 Autoinducer synthase C2U39_01870 PF00196 Bacterial regulatory proteins, luxR family C2U39_01870 PF03472 Autoinducer binding domain C2U39_01875 PF01810 LysE type translocator C2U39_01880 PF00149 Calcineurin-like phosphoesterase C2U39_01880 PF02872 5'-nucleotidase, C-terminal domain C2U39_01885 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U39_01890 PF00294 pfkB family carbohydrate kinase C2U39_01890 PF01467 Cytidylyltransferase-like C2U39_01895 PF02321 Outer membrane efflux protein C2U39_01900 PF00293 NUDIX domain C2U39_01905 PF06853 Protein of unknown function (DUF1249) C2U39_01910 PF00149 Calcineurin-like phosphoesterase C2U39_01915 PF05728 Uncharacterised protein family (UPF0227) C2U39_01920 PF00293 NUDIX domain C2U39_01930 PF07869 Protein of unknown function (DUF1656) C2U39_01935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_01935 PF00529 HlyD membrane-fusion protein of T1SS C2U39_01940 PF04632 Fusaric acid resistance protein family C2U39_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_01945 PF00986 DNA gyrase B subunit, carboxyl terminus C2U39_01945 PF00204 DNA gyrase B C2U39_01945 PF01751 Toprim domain C2U39_01950 PF00521 DNA gyrase/topoisomerase IV, subunit A C2U39_01950 PF03989 DNA gyrase C-terminal domain, beta-propeller C2U39_01960 PF13358 DDE superfamily endonuclease C2U39_01960 PF13592 Winged helix-turn helix C2U39_01975 PF00909 Ammonium Transporter Family C2U39_01980 PF00543 Nitrogen regulatory protein P-II C2U39_01985 PF08448 PAS fold C2U39_01985 PF00990 Diguanylate cyclase, GGDEF domain C2U39_01995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_01995 PF00672 HAMP domain C2U39_02005 PF00072 Response regulator receiver domain C2U39_02005 PF00486 Transcriptional regulatory protein, C terminal C2U39_02010 PF00672 HAMP domain C2U39_02010 PF00512 His Kinase A (phospho-acceptor) domain C2U39_02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_02015 PF00313 'Cold-shock' DNA-binding domain C2U39_02035 PF00436 Single-strand binding protein family C2U39_02040 PF00196 Bacterial regulatory proteins, luxR family C2U39_02045 PF17755 UvrA DNA-binding domain C2U39_02045 PF00005 ABC transporter C2U39_02045 PF17760 UvrA interaction domain C2U39_02060 PF03922 OmpW family C2U39_02065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_02065 PF12729 Four helix bundle sensory module for signal transduction C2U39_02065 PF00672 HAMP domain C2U39_02085 PF02219 Methylenetetrahydrofolate reductase C2U39_02095 PF03594 Benzoate membrane transport protein C2U39_02100 PF07883 Cupin domain C2U39_02100 PF01381 Helix-turn-helix C2U39_02130 PF04363 Protein of unknown function (DUF496) C2U39_02140 PF04751 Protein of unknown function (DUF615) C2U39_02145 PF01523 Putative modulator of DNA gyrase C2U39_02150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2U39_02155 PF01722 BolA-like protein C2U39_02165 PF05494 MlaC protein C2U39_02170 PF02470 MlaD protein C2U39_02175 PF02405 Permease MlaE C2U39_02180 PF00005 ABC transporter C2U39_02185 PF01380 SIS domain C2U39_02185 PF00571 CBS domain C2U39_02200 PF03968 OstA-like protein C2U39_02205 PF12399 Branched-chain amino acid ATP-binding cassette transporter C2U39_02205 PF00005 ABC transporter C2U39_02210 PF00309 Sigma-54 factor, Activator interacting domain (AID) C2U39_02210 PF04552 Sigma-54, DNA binding domain C2U39_02210 PF04963 Sigma-54 factor, core binding domain C2U39_02215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C2U39_02220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U39_02225 PF03668 P-loop ATPase protein family C2U39_02230 PF00381 PTS HPr component phosphorylation site C2U39_02235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U39_02235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U39_02235 PF02378 Phosphotransferase system, EIIC C2U39_02240 PF07071 KDGP aldolase C2U39_02245 PF03841 L-seryl-tRNA selenium transferase C2U39_02250 PF01979 Amidohydrolase family C2U39_02280 PF13180 PDZ domain C2U39_02285 PF13180 PDZ domain C2U39_02285 PF00595 PDZ domain C2U39_02295 PF03969 AFG1-like ATPase C2U39_02300 PF00572 Ribosomal protein L13 C2U39_02305 PF00380 Ribosomal protein S9/S16 C2U39_02310 PF00355 Rieske [2Fe-2S] domain C2U39_02310 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C2U39_02315 PF00032 Cytochrome b(C-terminal)/b6/petD C2U39_02315 PF00033 Cytochrome b/b6/petB C2U39_02320 PF02167 Cytochrome C1 family C2U39_02325 PF02798 Glutathione S-transferase, N-terminal domain C2U39_02325 PF00043 Glutathione S-transferase, C-terminal domain C2U39_02330 PF04386 Stringent starvation protein B C2U39_02335 PF04972 BON domain C2U39_02340 PF13580 SIS domain C2U39_02345 PF02021 Uncharacterised protein family UPF0102 C2U39_02350 PF04348 LppC putative lipoprotein C2U39_02355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U39_02370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U39_02375 PF00813 FliP family C2U39_02380 PF01313 Bacterial export proteins, family 3 C2U39_02385 PF01311 Bacterial export proteins, family 1 C2U39_02390 PF01312 FlhB HrpN YscU SpaS Family C2U39_02395 PF00771 FHIPEP family C2U39_02400 PF00072 Response regulator receiver domain C2U39_02400 PF02954 Bacterial regulatory protein, Fis family C2U39_02400 PF00158 Sigma-54 interaction domain C2U39_02405 PF02049 Flagellar hook-basal body complex protein FliE C2U39_02410 PF01514 Secretory protein of YscJ/FliF family C2U39_02410 PF08345 Flagellar M-ring protein C-terminal C2U39_02415 PF01706 FliG C-terminal domain C2U39_02415 PF14841 FliG middle domain C2U39_02415 PF14842 FliG N-terminal domain C2U39_02425 PF18269 T3SS EscN ATPase C-terminal domain C2U39_02425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U39_02445 PF13144 Chaperone for flagella basal body P-ring formation C2U39_02450 PF00460 Flagella basal body rod protein C2U39_02455 PF00460 Flagella basal body rod protein C2U39_02455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_02460 PF13861 FlgD Tudor-like domain C2U39_02460 PF03963 Flagellar hook capping protein - N-terminal region C2U39_02460 PF13860 FlgD Ig-like domain C2U39_02465 PF00460 Flagella basal body rod protein C2U39_02465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_02465 PF07559 Flagellar basal body protein FlaE C2U39_02470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_02470 PF00460 Flagella basal body rod protein C2U39_02475 PF00460 Flagella basal body rod protein C2U39_02475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_02480 PF02107 Flagellar L-ring protein C2U39_02485 PF02119 Flagellar P-ring protein C2U39_02495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_02495 PF00460 Flagella basal body rod protein C2U39_02500 PF00669 Bacterial flagellin N-terminal helical region C2U39_02520 PF00669 Bacterial flagellin N-terminal helical region C2U39_02520 PF00700 Bacterial flagellin C-terminal helical region C2U39_02525 PF00700 Bacterial flagellin C-terminal helical region C2U39_02525 PF00669 Bacterial flagellin N-terminal helical region C2U39_02530 PF07195 Flagellar hook-associated protein 2 C-terminus C2U39_02530 PF07196 Flagellin hook IN motif C2U39_02530 PF02465 Flagellar hook-associated protein 2 N-terminus C2U39_02535 PF02561 Flagellar protein FliS C2U39_02555 PF04542 Sigma-70 region 2 C2U39_02555 PF04545 Sigma-70, region 4 C2U39_02560 PF01618 MotA/TolQ/ExbB proton channel family C2U39_02565 PF00691 OmpA family C2U39_02565 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U39_02575 PF01464 Transglycosylase SLT domain C2U39_02575 PF01476 LysM domain C2U39_02585 PF02381 MraZ protein, putative antitoxin-like C2U39_02590 PF01795 MraW methylase family C2U39_02595 PF04999 Cell division protein FtsL C2U39_02600 PF03717 Penicillin-binding Protein dimerisation domain C2U39_02600 PF00905 Penicillin binding protein transpeptidase domain C2U39_02605 PF08245 Mur ligase middle domain C2U39_02605 PF02875 Mur ligase family, glutamate ligase domain C2U39_02605 PF01225 Mur ligase family, catalytic domain C2U39_02610 PF02875 Mur ligase family, glutamate ligase domain C2U39_02610 PF01225 Mur ligase family, catalytic domain C2U39_02610 PF08245 Mur ligase middle domain C2U39_02615 PF00953 Glycosyl transferase family 4 C2U39_02615 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C2U39_02620 PF02875 Mur ligase family, glutamate ligase domain C2U39_02620 PF08245 Mur ligase middle domain C2U39_02625 PF01098 Cell cycle protein C2U39_02630 PF03033 Glycosyltransferase family 28 N-terminal domain C2U39_02630 PF04101 Glycosyltransferase family 28 C-terminal domain C2U39_02635 PF08245 Mur ligase middle domain C2U39_02635 PF02875 Mur ligase family, glutamate ligase domain C2U39_02635 PF01225 Mur ligase family, catalytic domain C2U39_02640 PF03799 Cell division protein FtsQ C2U39_02640 PF08478 POTRA domain, FtsQ-type C2U39_02645 PF02491 SHS2 domain inserted in FTSA C2U39_02650 PF00091 Tubulin/FtsZ family, GTPase domain C2U39_02650 PF12327 FtsZ family, C-terminal domain C2U39_02655 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C2U39_02665 PF07517 SecA DEAD-like domain C2U39_02665 PF07516 SecA Wing and Scaffold domain C2U39_02665 PF01043 SecA preprotein cross-linking domain C2U39_02665 PF02810 SEC-C motif C2U39_02675 PF00293 NUDIX domain C2U39_02680 PF03884 DNA gyrase inhibitor YacG C2U39_02685 PF07072 Cell division protein C2U39_02690 PF01121 Dephospho-CoA kinase C2U39_02695 PF01478 Type IV leader peptidase family C2U39_02695 PF06750 Bacterial Peptidase A24 N-terminal domain C2U39_02700 PF00482 Type II secretion system (T2SS), protein F C2U39_02705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C2U39_02705 PF00437 Type II/IV secretion system protein C2U39_02720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C2U39_02720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C2U39_02730 PF01510 N-acetylmuramoyl-L-alanine amidase C2U39_02735 PF00392 Bacterial regulatory proteins, gntR family C2U39_02735 PF07729 FCD domain C2U39_02740 PF00456 Transketolase, thiamine diphosphate binding domain C2U39_02740 PF17831 Pyruvate dehydrogenase E1 component middle domain C2U39_02745 PF02817 e3 binding domain C2U39_02745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U39_02745 PF00364 Biotin-requiring enzyme C2U39_02750 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_02750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U39_02760 PF00672 HAMP domain C2U39_02760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_02760 PF12729 Four helix bundle sensory module for signal transduction C2U39_02765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_02765 PF12729 Four helix bundle sensory module for signal transduction C2U39_02765 PF00672 HAMP domain C2U39_02770 PF01734 Patatin-like phospholipase C2U39_02775 PF00330 Aconitase family (aconitate hydratase) C2U39_02775 PF06434 Aconitate hydratase 2 N-terminus C2U39_02775 PF11791 Aconitate B N-terminal domain C2U39_02780 PF00563 EAL domain C2U39_02780 PF12792 CSS motif domain associated with EAL C2U39_02785 PF03466 LysR substrate binding domain C2U39_02785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_02790 PF01810 LysE type translocator C2U39_02795 PF01565 FAD binding domain C2U39_02795 PF04030 D-arabinono-1,4-lactone oxidase C2U39_02800 PF07683 Cobalamin synthesis protein cobW C-terminal domain C2U39_02800 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2U39_02805 PF07690 Major Facilitator Superfamily C2U39_02815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2U39_02820 PF02152 Dihydroneopterin aldolase C2U39_02825 PF02660 Glycerol-3-phosphate acyltransferase C2U39_02870 PF00892 EamA-like transporter family C2U39_02875 PF01037 Lrp/AsnC ligand binding domain C2U39_02880 PF14602 Hexapeptide repeat of succinyl-transferase C2U39_02880 PF12464 Maltose acetyltransferase C2U39_02885 PF00128 Alpha amylase, catalytic domain C2U39_02885 PF11941 Domain of unknown function (DUF3459) C2U39_02890 PF00367 phosphotransferase system, EIIB C2U39_02890 PF02378 Phosphotransferase system, EIIC C2U39_02895 PF00356 Bacterial regulatory proteins, lacI family C2U39_02910 PF00710 Asparaginase, N-terminal C2U39_02910 PF17763 Glutaminase/Asparaginase C-terminal domain C2U39_02925 PF02142 MGS-like domain C2U39_02930 PF00210 Ferritin-like domain C2U39_02935 PF04324 BFD-like [2Fe-2S] binding domain C2U39_02945 PF08351 Domain of unknown function (DUF1726) C2U39_02945 PF05127 Helicase C2U39_02945 PF13718 GNAT acetyltransferase 2 C2U39_02945 PF17176 tRNA-binding domain C2U39_02950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C2U39_02950 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C2U39_02955 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2U39_02960 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C2U39_02965 PF00510 Cytochrome c oxidase subunit III C2U39_02990 PF01040 UbiA prenyltransferase family C2U39_02995 PF00171 Aldehyde dehydrogenase family C2U39_03000 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_03005 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_03010 PF00005 ABC transporter C2U39_03010 PF08402 TOBE domain C2U39_03015 PF13416 Bacterial extracellular solute-binding protein C2U39_03020 PF03466 LysR substrate binding domain C2U39_03020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_03025 PF03553 Na+/H+ antiporter family C2U39_03065 PF00534 Glycosyl transferases group 1 C2U39_03065 PF08323 Starch synthase catalytic domain C2U39_03070 PF00483 Nucleotidyl transferase C2U39_03075 PF08468 Methyltransferase small domain N-terminal C2U39_03075 PF05175 Methyltransferase small domain C2U39_03080 PF00701 Dihydrodipicolinate synthetase family C2U39_03085 PF00563 EAL domain C2U39_03085 PF00990 Diguanylate cyclase, GGDEF domain C2U39_03085 PF00360 Phytochrome region C2U39_03085 PF01590 GAF domain C2U39_03090 PF13419 Haloacid dehalogenase-like hydrolase C2U39_03095 PF17209 Hfq protein C2U39_03100 PF04403 Paraquat-inducible protein A C2U39_03105 PF02470 MlaD protein C2U39_03110 PF03886 ABC-type transport auxiliary lipoprotein component C2U39_03115 PF01389 OmpA-like transmembrane domain C2U39_03115 PF00691 OmpA family C2U39_03120 PF00657 GDSL-like Lipase/Acylhydrolase C2U39_03130 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C2U39_03130 PF01464 Transglycosylase SLT domain C2U39_03135 PF04362 Bacterial Fe(2+) trafficking C2U39_03140 PF00730 HhH-GPD superfamily base excision DNA repair protein C2U39_03140 PF10576 Iron-sulfur binding domain of endonuclease III C2U39_03140 PF14815 NUDIX domain C2U39_03140 PF00633 Helix-hairpin-helix motif C2U39_03145 PF16537 Type II secretion system protein B C2U39_03150 PF13401 AAA domain C2U39_03150 PF01471 Putative peptidoglycan binding domain C2U39_03155 PF01743 Poly A polymerase head domain C2U39_03155 PF01966 HD domain C2U39_03155 PF12627 Probable RNA and SrmB- binding site of polymerase A C2U39_03160 PF01384 Phosphate transporter family C2U39_03165 PF01865 Protein of unknown function DUF47 C2U39_03170 PF01928 CYTH domain C2U39_03175 PF05433 Glycine zipper 2TM domain C2U39_03180 PF00583 Acetyltransferase (GNAT) family C2U39_03185 PF01321 Creatinase/Prolidase N-terminal domain C2U39_03185 PF00557 Metallopeptidase family M24 C2U39_03190 PF00392 Bacterial regulatory proteins, gntR family C2U39_03195 PF01293 Phosphoenolpyruvate carboxykinase C2U39_03200 PF01430 Hsp33 protein C2U39_03205 PF01479 S4 domain C2U39_03210 PF11356 Type II secretion system protein C C2U39_03215 PF03958 Bacterial type II/III secretion system short domain C2U39_03215 PF00263 Bacterial type II and III secretion system protein C2U39_03220 PF00437 Type II/IV secretion system protein C2U39_03225 PF00482 Type II secretion system (T2SS), protein F C2U39_03230 PF07963 Prokaryotic N-terminal methylation motif C2U39_03230 PF08334 Type II secretion system (T2SS), protein G C2U39_03235 PF12019 Type II transport protein GspH C2U39_03235 PF07963 Prokaryotic N-terminal methylation motif C2U39_03240 PF07963 Prokaryotic N-terminal methylation motif C2U39_03240 PF02501 Type II secretion system (T2SS), protein I C2U39_03245 PF07963 Prokaryotic N-terminal methylation motif C2U39_03245 PF11612 Type II secretion system (T2SS), protein J C2U39_03255 PF03934 Type II secretion system (T2SS), protein K C2U39_03260 PF05134 Type II secretion system (T2SS), protein L C2U39_03260 PF12693 GspL periplasmic domain C2U39_03265 PF04612 Type II secretion system (T2SS), protein M C2U39_03270 PF01203 Type II secretion system (T2SS), protein N C2U39_03275 PF00196 Bacterial regulatory proteins, luxR family C2U39_03280 PF01479 S4 domain C2U39_03280 PF00579 tRNA synthetases class I (W and Y) C2U39_03285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_03285 PF03466 LysR substrate binding domain C2U39_03290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U39_03295 PF13419 Haloacid dehalogenase-like hydrolase C2U39_03300 PF00293 NUDIX domain C2U39_03305 PF00459 Inositol monophosphatase family C2U39_03310 PF03222 Tryptophan/tyrosine permease family C2U39_03315 PF01588 Putative tRNA binding domain C2U39_03325 PF01340 Met Apo-repressor, MetJ C2U39_03330 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U39_03335 PF00742 Homoserine dehydrogenase C2U39_03335 PF03447 Homoserine dehydrogenase, NAD binding domain C2U39_03335 PF00696 Amino acid kinase family C2U39_03340 PF04172 LrgB-like family C2U39_03345 PF03788 LrgA family C2U39_03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_03350 PF03466 LysR substrate binding domain C2U39_03365 PF00392 Bacterial regulatory proteins, gntR family C2U39_03365 PF00155 Aminotransferase class I and II C2U39_03385 PF04073 Aminoacyl-tRNA editing domain C2U39_03390 PF00990 Diguanylate cyclase, GGDEF domain C2U39_03390 PF08448 PAS fold C2U39_03390 PF08447 PAS fold C2U39_03390 PF05231 MASE1 C2U39_03390 PF13426 PAS domain C2U39_03390 PF00563 EAL domain C2U39_03395 PF00311 Phosphoenolpyruvate carboxylase C2U39_03400 PF07687 Peptidase dimerisation domain C2U39_03400 PF01546 Peptidase family M20/M25/M40 C2U39_03405 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U39_03405 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U39_03410 PF00696 Amino acid kinase family C2U39_03415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U39_03415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U39_03420 PF00764 Arginosuccinate synthase C2U39_03425 PF14698 Argininosuccinate lyase C-terminal C2U39_03425 PF00206 Lyase C2U39_03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_03430 PF03466 LysR substrate binding domain C2U39_03440 PF14552 Tautomerase enzyme C2U39_03470 PF14602 Hexapeptide repeat of succinyl-transferase C2U39_03470 PF12464 Maltose acetyltransferase C2U39_03475 PF13194 Domain of unknown function (DUF4010) C2U39_03485 PF00005 ABC transporter C2U39_03490 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_03495 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_03500 PF00291 Pyridoxal-phosphate dependent enzyme C2U39_03505 PF00326 Prolyl oligopeptidase family C2U39_03505 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2U39_03525 PF03710 Glutamate-ammonia ligase adenylyltransferase C2U39_03525 PF08335 GlnD PII-uridylyltransferase C2U39_03535 PF00672 HAMP domain C2U39_03535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_03540 PF00027 Cyclic nucleotide-binding domain C2U39_03540 PF00520 Ion transport protein C2U39_03545 PF08239 Bacterial SH3 domain C2U39_03550 PF00293 NUDIX domain C2U39_03550 PF09297 NADH pyrophosphatase zinc ribbon domain C2U39_03555 PF01208 Uroporphyrinogen decarboxylase (URO-D) C2U39_03560 PF00480 ROK family C2U39_03565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U39_03565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U39_03570 PF00162 Phosphoglycerate kinase C2U39_03575 PF01116 Fructose-bisphosphate aldolase class-II C2U39_03580 PF01266 FAD dependent oxidoreductase C2U39_03595 PF02683 Cytochrome C biogenesis protein transmembrane region C2U39_03595 PF11412 Disulphide bond corrector protein DsbC C2U39_03600 PF03091 CutA1 divalent ion tolerance protein C2U39_03615 PF03466 LysR substrate binding domain C2U39_03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_03620 PF01571 Aminomethyltransferase folate-binding domain C2U39_03625 PF03937 Flavinator of succinate dehydrogenase C2U39_03635 PF00890 FAD binding domain C2U39_03635 PF02910 Fumarate reductase flavoprotein C-term C2U39_03640 PF08281 Sigma-70, region 4 C2U39_03640 PF04542 Sigma-70 region 2 C2U39_03645 PF03873 Anti sigma-E protein RseA, C-terminal domain C2U39_03645 PF03872 Anti sigma-E protein RseA, N-terminal domain C2U39_03650 PF17188 MucB/RseB C-terminal domain C2U39_03650 PF03888 MucB/RseB N-terminal domain C2U39_03660 PF00679 Elongation factor G C-terminus C2U39_03660 PF06421 GTP-binding protein LepA C-terminus C2U39_03660 PF00009 Elongation factor Tu GTP binding domain C2U39_03660 PF03144 Elongation factor Tu domain 2 C2U39_03665 PF10502 Signal peptidase, peptidase S26 C2U39_03670 PF14622 Ribonuclease-III-like C2U39_03670 PF00035 Double-stranded RNA binding motif C2U39_03675 PF07650 KH domain C2U39_03675 PF01926 50S ribosome-binding GTPase C2U39_03680 PF02565 Recombination protein O C terminal C2U39_03680 PF11967 Recombination protein O N terminal C2U39_03685 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C2U39_03690 PF01510 N-acetylmuramoyl-L-alanine amidase C2U39_03695 PF07308 Protein of unknown function (DUF1456) C2U39_03700 PF01627 Hpt domain C2U39_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_03700 PF00512 His Kinase A (phospho-acceptor) domain C2U39_03700 PF00672 HAMP domain C2U39_03700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U39_03700 PF00072 Response regulator receiver domain C2U39_03705 PF01938 TRAM domain C2U39_03705 PF05958 tRNA (Uracil-5-)-methyltransferase C2U39_03710 PF04607 Region found in RelA / SpoT proteins C2U39_03710 PF13291 ACT domain C2U39_03710 PF02824 TGS domain C2U39_03715 PF03819 MazG nucleotide pyrophosphohydrolase domain C2U39_03720 PF06418 CTP synthase N-terminus C2U39_03720 PF00117 Glutamine amidotransferase class-I C2U39_03725 PF00113 Enolase, C-terminal TIM barrel domain C2U39_03725 PF03952 Enolase, N-terminal domain C2U39_03730 PF04977 Septum formation initiator C2U39_03735 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C2U39_03740 PF02542 YgbB family C2U39_03745 PF01142 tRNA pseudouridine synthase D (TruD) C2U39_03750 PF01975 Survival protein SurE C2U39_03760 PF09335 SNARE associated Golgi protein C2U39_03765 PF01551 Peptidase family M23 C2U39_03765 PF01476 LysM domain C2U39_03770 PF00140 Sigma-70 factor, region 1.2 C2U39_03770 PF04542 Sigma-70 region 2 C2U39_03770 PF04545 Sigma-70, region 4 C2U39_03770 PF04539 Sigma-70 region 3 C2U39_03775 PF00814 Glycoprotease family C2U39_03780 PF01165 Ribosomal protein S21 C2U39_03785 PF09424 Yqey-like protein C2U39_03790 PF10410 DnaB-helicase binding domain of primase C2U39_03790 PF01807 CHC2 zinc finger C2U39_03790 PF08278 DNA primase DnaG DnaB-binding C2U39_03790 PF08275 DNA primase catalytic core, N-terminal domain C2U39_03795 PF04545 Sigma-70, region 4 C2U39_03795 PF04539 Sigma-70 region 3 C2U39_03795 PF04542 Sigma-70 region 2 C2U39_03795 PF03979 Sigma-70 factor, region 1.1 C2U39_03795 PF04546 Sigma-70, non-essential region C2U39_03795 PF00140 Sigma-70 factor, region 1.2 C2U39_03810 PF00128 Alpha amylase, catalytic domain C2U39_03825 PF02843 Phosphoribosylglycinamide synthetase, C domain C2U39_03825 PF02844 Phosphoribosylglycinamide synthetase, N domain C2U39_03825 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C2U39_03830 PF02142 MGS-like domain C2U39_03830 PF01808 AICARFT/IMPCHase bienzyme C2U39_03835 PF13411 MerR HTH family regulatory protein C2U39_03845 PF03889 Alternative ribosome-rescue factor A C2U39_03850 PF06969 HemN C-terminal domain C2U39_03850 PF04055 Radical SAM superfamily C2U39_03855 PF01725 Ham1 family C2U39_03860 PF07690 Major Facilitator Superfamily C2U39_03865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2U39_03865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U39_03875 PF01957 NfeD-like C-terminal, partner-binding C2U39_03880 PF16200 C-terminal region of band_7 C2U39_03880 PF01145 SPFH domain / Band 7 family C2U39_03885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U39_03885 PF10414 Sirohaem synthase dimerisation region C2U39_03885 PF14824 Sirohaem biosynthesis protein central C2U39_03890 PF01507 Phosphoadenosine phosphosulfate reductase family C2U39_03895 PF00009 Elongation factor Tu GTP binding domain C2U39_03900 PF03600 Citrate transporter C2U39_03900 PF02080 TrkA-C domain C2U39_03955 PF08447 PAS fold C2U39_03955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_03975 PF00005 ABC transporter C2U39_03990 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C2U39_04005 PF00719 Inorganic pyrophosphatase C2U39_04010 PF01225 Mur ligase family, catalytic domain C2U39_04010 PF02875 Mur ligase family, glutamate ligase domain C2U39_04010 PF08245 Mur ligase middle domain C2U39_04015 PF02441 Flavoprotein C2U39_04020 PF00440 Bacterial regulatory proteins, tetR family C2U39_04025 PF00156 Phosphoribosyl transferase domain C2U39_04030 PF00005 ABC transporter C2U39_04035 PF01061 ABC-2 type transporter C2U39_04045 PF02569 Pantoate-beta-alanine ligase C2U39_04050 PF02548 Ketopantoate hydroxymethyltransferase C2U39_04055 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2U39_04060 PF12626 Polymerase A arginine-rich C-terminus C2U39_04060 PF01743 Poly A polymerase head domain C2U39_04060 PF12627 Probable RNA and SrmB- binding site of polymerase A C2U39_04065 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U39_04070 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2U39_04075 PF03749 Sugar fermentation stimulation protein RE domain C2U39_04075 PF17746 SfsA N-terminal OB domain C2U39_04085 PF00270 DEAD/DEAH box helicase C2U39_04085 PF08482 ATP-dependent helicase C-terminal C2U39_04085 PF00271 Helicase conserved C-terminal domain C2U39_04085 PF04408 Helicase associated domain (HA2) C2U39_04090 PF00912 Transglycosylase C2U39_04090 PF00905 Penicillin binding protein transpeptidase domain C2U39_04090 PF14814 Bifunctional transglycosylase second domain C2U39_04095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U39_04100 PF00893 Small Multidrug Resistance protein C2U39_04110 PF03466 LysR substrate binding domain C2U39_04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_04120 PF01569 PAP2 superfamily C2U39_04135 PF00202 Aminotransferase class-III C2U39_04140 PF00654 Voltage gated chloride channel C2U39_04150 PF01521 Iron-sulphur cluster biosynthesis C2U39_04175 PF01810 LysE type translocator C2U39_04180 PF02954 Bacterial regulatory protein, Fis family C2U39_04185 PF01207 Dihydrouridine synthase (Dus) C2U39_04195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_04225 PF00072 Response regulator receiver domain C2U39_04230 PF00854 POT family C2U39_04235 PF00483 Nucleotidyl transferase C2U39_04245 PF00459 Inositol monophosphatase family C2U39_04250 PF03795 YCII-related domain C2U39_04255 PF04279 Intracellular septation protein A C2U39_04260 PF00282 Pyridoxal-dependent decarboxylase conserved domain C2U39_04265 PF03006 Haemolysin-III related C2U39_04270 PF06826 Predicted Permease Membrane Region C2U39_04270 PF02080 TrkA-C domain C2U39_04280 PF07690 Major Facilitator Superfamily C2U39_04285 PF03466 LysR substrate binding domain C2U39_04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_04290 PF03413 Peptidase propeptide and YPEB domain C2U39_04290 PF01447 Thermolysin metallopeptidase, catalytic domain C2U39_04290 PF02868 Thermolysin metallopeptidase, alpha-helical domain C2U39_04290 PF04151 Bacterial pre-peptidase C-terminal domain C2U39_04290 PF07504 Fungalysin/Thermolysin Propeptide Motif C2U39_04295 PF13302 Acetyltransferase (GNAT) domain C2U39_04300 PF13302 Acetyltransferase (GNAT) domain C2U39_04310 PF04074 YhcH/YjgK/YiaL C2U39_04315 PF00871 Acetokinase family C2U39_04320 PF00924 Mechanosensitive ion channel C2U39_04335 PF17969 L,D-transpeptidase C-terminal domain C2U39_04335 PF03734 L,D-transpeptidase catalytic domain C2U39_04340 PF00474 Sodium:solute symporter family C2U39_04350 PF13411 MerR HTH family regulatory protein C2U39_04380 PF02525 Flavodoxin-like fold C2U39_04385 PF03466 LysR substrate binding domain C2U39_04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_04390 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C2U39_04400 PF00005 ABC transporter C2U39_04400 PF12848 ABC transporter C2U39_04405 PF00478 IMP dehydrogenase / GMP reductase domain C2U39_04405 PF00571 CBS domain C2U39_04410 PF00267 Gram-negative porin C2U39_04415 PF01584 CheW-like domain C2U39_04415 PF00072 Response regulator receiver domain C2U39_04420 PF13472 GDSL-like Lipase/Acylhydrolase family C2U39_04425 PF00005 ABC transporter C2U39_04435 PF01370 NAD dependent epimerase/dehydratase family C2U39_04435 PF08338 Domain of unknown function (DUF1731) C2U39_04440 PF12792 CSS motif domain associated with EAL C2U39_04440 PF00563 EAL domain C2U39_04445 PF00155 Aminotransferase class I and II C2U39_04450 PF04389 Peptidase family M28 C2U39_04450 PF01483 Proprotein convertase P-domain C2U39_04455 PF02390 Putative methyltransferase C2U39_04460 PF04320 Protein with unknown function (DUF469) C2U39_04465 PF04960 Glutaminase C2U39_04470 PF00581 Rhodanese-like domain C2U39_04475 PF06082 Exopolysaccharide biosynthesis protein YbjH C2U39_04480 PF06251 Capsule biosynthesis GfcC C2U39_04485 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF C2U39_04520 PF06004 Bacterial protein of unknown function (DUF903) C2U39_04525 PF00005 ABC transporter C2U39_04525 PF00664 ABC transporter transmembrane region C2U39_04530 PF00561 alpha/beta hydrolase fold C2U39_04550 PF00589 Phage integrase family C2U39_04565 PF00589 Phage integrase family C2U39_04565 PF02899 Phage integrase, N-terminal SAM-like domain C2U39_04610 PF01590 GAF domain C2U39_04610 PF00990 Diguanylate cyclase, GGDEF domain C2U39_04610 PF00360 Phytochrome region C2U39_04610 PF00563 EAL domain C2U39_04620 PF06877 Regulator of ribonuclease activity B C2U39_04625 PF03707 Bacterial signalling protein N terminal repeat C2U39_04625 PF00990 Diguanylate cyclase, GGDEF domain C2U39_04625 PF00563 EAL domain C2U39_04645 PF09905 DNA-binding protein VF530 C2U39_04650 PF02666 Phosphatidylserine decarboxylase C2U39_04655 PF03193 RsgA GTPase C2U39_04660 PF00929 Exonuclease C2U39_04700 PF00313 'Cold-shock' DNA-binding domain C2U39_04710 PF00672 HAMP domain C2U39_04710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_04715 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U39_04720 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U39_04755 PF00704 Glycosyl hydrolases family 18 C2U39_04755 PF06483 Chitinase C C2U39_04770 PF02472 Biopolymer transport protein ExbD/TolR C2U39_04775 PF01618 MotA/TolQ/ExbB proton channel family C2U39_04780 PF01618 MotA/TolQ/ExbB proton channel family C2U39_04790 PF07715 TonB-dependent Receptor Plug Domain C2U39_04790 PF00593 TonB dependent receptor C2U39_04805 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_04810 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U39_04810 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_04815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_04820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_04820 PF00005 ABC transporter C2U39_04825 PF00005 ABC transporter C2U39_04825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_04835 PF07687 Peptidase dimerisation domain C2U39_04835 PF01546 Peptidase family M20/M25/M40 C2U39_04845 PF00156 Phosphoribosyl transferase domain C2U39_04855 PF07417 Sigma factor-binding transcriptional regulator Crl C2U39_04860 PF00696 Amino acid kinase family C2U39_04860 PF01472 PUA domain C2U39_04865 PF00171 Aldehyde dehydrogenase family C2U39_04875 PF00582 Universal stress protein family C2U39_04890 PF00384 Molybdopterin oxidoreductase C2U39_04890 PF01568 Molydopterin dinucleotide binding domain C2U39_04890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U39_04890 PF04324 BFD-like [2Fe-2S] binding domain C2U39_04895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U39_04895 PF14824 Sirohaem biosynthesis protein central C2U39_04895 PF10414 Sirohaem synthase dimerisation region C2U39_04905 PF00005 ABC transporter C2U39_04910 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_04915 PF00005 ABC transporter C2U39_04920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U39_04920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U39_04920 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_04920 PF13806 Rieske-like [2Fe-2S] domain C2U39_04920 PF18267 Rubredoxin NAD+ reductase C-terminal domain C2U39_04920 PF04324 BFD-like [2Fe-2S] binding domain C2U39_04925 PF13806 Rieske-like [2Fe-2S] domain C2U39_04925 PF18267 Rubredoxin NAD+ reductase C-terminal domain C2U39_04925 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_04925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U39_04925 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U39_04925 PF04324 BFD-like [2Fe-2S] binding domain C2U39_04930 PF00294 pfkB family carbohydrate kinase C2U39_04935 PF04227 Indigoidine synthase A like protein C2U39_04940 PF00194 Eukaryotic-type carbonic anhydrase C2U39_04945 PF01609 Transposase DDE domain C2U39_04965 PF00994 Probable molybdopterin binding domain C2U39_04975 PF06738 Putative threonine/serine exporter C2U39_04980 PF12821 Threonine/Serine exporter, ThrE C2U39_04985 PF00186 Dihydrofolate reductase C2U39_04990 PF00571 CBS domain C2U39_04990 PF00005 ABC transporter C2U39_04995 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_05000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C2U39_05005 PF01507 Phosphoadenosine phosphosulfate reductase family C2U39_05010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U39_05010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U39_05015 PF00667 FAD binding domain C2U39_05015 PF00175 Oxidoreductase NAD-binding domain C2U39_05015 PF00258 Flavodoxin C2U39_05020 PF02567 Phenazine biosynthesis-like protein C2U39_05025 PF01336 OB-fold nucleic acid binding domain C2U39_05025 PF00152 tRNA synthetases class II (D, K and N) C2U39_05035 PF00672 HAMP domain C2U39_05035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_05035 PF02743 Cache domain C2U39_05040 PF03616 Sodium/glutamate symporter C2U39_05045 PF17763 Glutaminase/Asparaginase C-terminal domain C2U39_05045 PF00710 Asparaginase, N-terminal C2U39_05050 PF07023 Protein of unknown function (DUF1315) C2U39_05055 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U39_05055 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U39_05070 PF01343 Peptidase family S49 C2U39_05075 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_05075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U39_05080 PF00881 Nitroreductase family C2U39_05090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_05090 PF00672 HAMP domain C2U39_05090 PF02743 Cache domain C2U39_05095 PF14602 Hexapeptide repeat of succinyl-transferase C2U39_05095 PF12464 Maltose acetyltransferase C2U39_05100 PF01842 ACT domain C2U39_05100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U39_05100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U39_05110 PF00107 Zinc-binding dehydrogenase C2U39_05110 PF08240 Alcohol dehydrogenase GroES-like domain C2U39_05115 PF03466 LysR substrate binding domain C2U39_05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_05125 PF00474 Sodium:solute symporter family C2U39_05130 PF06196 Protein of unknown function (DUF997) C2U39_05135 PF02785 Biotin carboxylase C-terminal domain C2U39_05135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U39_05135 PF00289 Biotin carboxylase, N-terminal domain C2U39_05140 PF00364 Biotin-requiring enzyme C2U39_05145 PF01220 Dehydroquinase class II C2U39_05150 PF00501 AMP-binding enzyme C2U39_05150 PF13193 AMP-binding enzyme C-terminal domain C2U39_05150 PF16177 Acetyl-coenzyme A synthetase N-terminus C2U39_05155 PF03707 Bacterial signalling protein N terminal repeat C2U39_05155 PF00563 EAL domain C2U39_05155 PF00990 Diguanylate cyclase, GGDEF domain C2U39_05170 PF02613 Nitrate reductase delta subunit C2U39_05185 PF00464 Serine hydroxymethyltransferase C2U39_05195 PF03477 ATP cone domain C2U39_05200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2U39_05200 PF01872 RibD C-terminal domain C2U39_05205 PF00677 Lumazine binding domain C2U39_05210 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C2U39_05210 PF00925 GTP cyclohydrolase II C2U39_05215 PF00885 6,7-dimethyl-8-ribityllumazine synthase C2U39_05220 PF01029 NusB family C2U39_05225 PF02769 AIR synthase related protein, C-terminal domain C2U39_05225 PF00586 AIR synthase related protein, N-terminal domain C2U39_05230 PF04608 Phosphatidylglycerophosphatase A C2U39_05235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_05235 PF00005 ABC transporter C2U39_05240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_05255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C2U39_05255 PF02779 Transketolase, pyrimidine binding domain C2U39_05255 PF02780 Transketolase, C-terminal domain C2U39_05260 PF00348 Polyprenyl synthetase C2U39_05265 PF02609 Exonuclease VII small subunit C2U39_05270 PF01618 MotA/TolQ/ExbB proton channel family C2U39_05275 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U39_05275 PF00691 OmpA family C2U39_05280 PF03449 Transcription elongation factor, N-terminal C2U39_05280 PF01272 Transcription elongation factor, GreA/GreB, C-term C2U39_05290 PF01985 CRS1 / YhbY (CRM) domain C2U39_05295 PF01728 FtsJ-like methyltransferase C2U39_05300 PF01434 Peptidase family M41 C2U39_05300 PF06480 FtsH Extracellular C2U39_05300 PF17862 AAA+ lid domain C2U39_05300 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_05305 PF00809 Pterin binding enzyme C2U39_05310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2U39_05310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2U39_05310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2U39_05310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2U39_05315 PF00121 Triosephosphate isomerase C2U39_05320 PF03840 Preprotein translocase SecG subunit C2U39_05335 PF02576 RimP N-terminal domain C2U39_05335 PF17384 RimP C-terminal SH3 domain C2U39_05340 PF00575 S1 RNA binding domain C2U39_05340 PF08529 NusA N-terminal domain C2U39_05340 PF13184 NusA-like KH domain C2U39_05345 PF04760 Translation initiation factor IF-2, N-terminal region C2U39_05345 PF11987 Translation-initiation factor 2 C2U39_05345 PF00009 Elongation factor Tu GTP binding domain C2U39_05345 PF08364 Bacterial translation initiation factor IF-2 associated region C2U39_05350 PF02033 Ribosome-binding factor A C2U39_05355 PF09157 Pseudouridine synthase II TruB, C-terminal C2U39_05355 PF01509 TruB family pseudouridylate synthase (N terminal domain) C2U39_05355 PF16198 tRNA pseudouridylate synthase B C-terminal domain C2U39_05360 PF00312 Ribosomal protein S15 C2U39_05365 PF03725 3' exoribonuclease family, domain 2 C2U39_05365 PF01138 3' exoribonuclease family, domain 1 C2U39_05365 PF00575 S1 RNA binding domain C2U39_05365 PF00013 KH domain C2U39_05365 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C2U39_05370 PF07690 Major Facilitator Superfamily C2U39_05375 PF02635 DsrE/DsrF-like family C2U39_05380 PF06476 Protein of unknown function (DUF1090) C2U39_05385 PF12838 4Fe-4S dicluster domain C2U39_05395 PF17969 L,D-transpeptidase C-terminal domain C2U39_05395 PF03734 L,D-transpeptidase catalytic domain C2U39_05405 PF01523 Putative modulator of DNA gyrase C2U39_05410 PF01523 Putative modulator of DNA gyrase C2U39_05415 PF00258 Flavodoxin C2U39_05420 PF02899 Phage integrase, N-terminal SAM-like domain C2U39_05420 PF00589 Phage integrase family C2U39_05425 PF01741 Large-conductance mechanosensitive channel, MscL C2U39_05435 PF01368 DHH family C2U39_05435 PF17768 RecJ OB domain C2U39_05435 PF02272 DHHA1 domain C2U39_05440 PF13411 MerR HTH family regulatory protein C2U39_05455 PF02508 Rnf-Nqr subunit, membrane protein C2U39_05465 PF04055 Radical SAM superfamily C2U39_05465 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C2U39_05470 PF03099 Biotin/lipoate A/B protein ligase family C2U39_05475 PF04359 Protein of unknown function (DUF493) C2U39_05480 PF07943 Penicillin-binding protein 5, C-terminal domain C2U39_05480 PF00768 D-alanyl-D-alanine carboxypeptidase C2U39_05485 PF03330 Lytic transglycolase C2U39_05485 PF05036 Sporulation related domain C2U39_05490 PF13406 Transglycosylase SLT domain C2U39_05495 PF01098 Cell cycle protein C2U39_05500 PF00905 Penicillin binding protein transpeptidase domain C2U39_05500 PF03717 Penicillin-binding Protein dimerisation domain C2U39_05505 PF02590 Predicted SPOUT methyltransferase C2U39_05515 PF01467 Cytidylyltransferase-like C2U39_05530 PF08264 Anticodon-binding domain of tRNA C2U39_05530 PF13603 Leucyl-tRNA synthetase, Domain 2 C2U39_05530 PF00133 tRNA synthetases class I (I, L, M and V) C2U39_05535 PF07295 Zinc-ribbon containing domain C2U39_05540 PF00795 Carbon-nitrogen hydrolase C2U39_05545 PF00571 CBS domain C2U39_05545 PF03471 Transporter associated domain C2U39_05550 PF02130 Uncharacterized protein family UPF0054 C2U39_05555 PF02562 PhoH-like protein C2U39_05560 PF04055 Radical SAM superfamily C2U39_05560 PF01938 TRAM domain C2U39_05560 PF00919 Uncharacterized protein family UPF0004 C2U39_05565 PF01494 FAD binding domain C2U39_05570 PF00857 Isochorismatase family C2U39_05575 PF03466 LysR substrate binding domain C2U39_05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_05585 PF13419 Haloacid dehalogenase-like hydrolase C2U39_05590 PF00990 Diguanylate cyclase, GGDEF domain C2U39_05590 PF17151 Periplasmic sensor domain C2U39_05600 PF17152 Periplasmic sensor domain C2U39_05600 PF00990 Diguanylate cyclase, GGDEF domain C2U39_05610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U39_05610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U39_05620 PF03171 2OG-Fe(II) oxygenase superfamily C2U39_05620 PF14226 non-haem dioxygenase in morphine synthesis N-terminal C2U39_05625 PF03180 NLPA lipoprotein C2U39_05630 PF09383 NIL domain C2U39_05630 PF00005 ABC transporter C2U39_05635 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_05640 PF01132 Elongation factor P (EF-P) OB domain C2U39_05640 PF09285 Elongation factor P, C-terminal C2U39_05640 PF08207 Elongation factor P (EF-P) KOW-like domain C2U39_05650 PF00478 IMP dehydrogenase / GMP reductase domain C2U39_05655 PF18030 RimK PreATP-grasp domain C2U39_05655 PF08443 RimK-like ATP-grasp domain C2U39_05660 PF08521 Two-component sensor kinase N-terminal C2U39_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_05660 PF00512 His Kinase A (phospho-acceptor) domain C2U39_05665 PF00072 Response regulator receiver domain C2U39_05665 PF00486 Transcriptional regulatory protein, C terminal C2U39_05675 PF00106 short chain dehydrogenase C2U39_05685 PF00501 AMP-binding enzyme C2U39_05700 PF06224 Winged helix DNA-binding domain C2U39_05715 PF02313 Fumarate reductase subunit D C2U39_05720 PF02300 Fumarate reductase subunit C C2U39_05725 PF13085 2Fe-2S iron-sulfur cluster binding domain C2U39_05725 PF13183 4Fe-4S dicluster domain C2U39_05730 PF02910 Fumarate reductase flavoprotein C-term C2U39_05730 PF00890 FAD binding domain C2U39_05735 PF02743 Cache domain C2U39_05735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_05735 PF00672 HAMP domain C2U39_05740 PF03009 Glycerophosphoryl diester phosphodiesterase family C2U39_05745 PF12795 Mechanosensitive ion channel porin domain C2U39_05745 PF00924 Mechanosensitive ion channel C2U39_05745 PF12794 Mechanosensitive ion channel inner membrane domain 1 C2U39_05755 PF01476 LysM domain C2U39_05755 PF08525 Opacity-associated protein A N-terminal motif C2U39_05755 PF01551 Peptidase family M23 C2U39_05765 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C2U39_05765 PF02753 Pili assembly chaperone PapD, C-terminal domain C2U39_05775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C2U39_05775 PF02753 Pili assembly chaperone PapD, C-terminal domain C2U39_05790 PF03466 LysR substrate binding domain C2U39_05790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_05805 PF03466 LysR substrate binding domain C2U39_05810 PF00912 Transglycosylase C2U39_05810 PF00905 Penicillin binding protein transpeptidase domain C2U39_05810 PF17092 Penicillin-binding protein OB-like domain C2U39_05835 PF07660 Secretin and TonB N terminus short domain C2U39_05835 PF00263 Bacterial type II and III secretion system protein C2U39_05835 PF11741 AMIN domain C2U39_05835 PF03958 Bacterial type II/III secretion system short domain C2U39_05840 PF01202 Shikimate kinase C2U39_05845 PF01761 3-dehydroquinate synthase C2U39_05850 PF05036 Sporulation related domain C2U39_05855 PF02086 D12 class N6 adenine-specific DNA methyltransferase C2U39_05860 PF00834 Ribulose-phosphate 3 epimerase family C2U39_05865 PF13419 Haloacid dehalogenase-like hydrolase C2U39_05870 PF00579 tRNA synthetases class I (W and Y) C2U39_05880 PF00117 Glutamine amidotransferase class-I C2U39_05885 PF00202 Aminotransferase class-III C2U39_05890 PF04958 Arginine N-succinyltransferase beta subunit C2U39_05895 PF00171 Aldehyde dehydrogenase family C2U39_05910 PF13419 Haloacid dehalogenase-like hydrolase C2U39_05915 PF07690 Major Facilitator Superfamily C2U39_05925 PF07859 alpha/beta hydrolase fold C2U39_05935 PF02080 TrkA-C domain C2U39_05935 PF03600 Citrate transporter C2U39_05980 PF02384 N-6 DNA Methylase C2U39_05980 PF12161 HsdM N-terminal domain C2U39_05990 PF01420 Type I restriction modification DNA specificity domain C2U39_05995 PF17191 RecG wedge domain C2U39_05995 PF13749 Putative ATP-dependent DNA helicase recG C-terminal C2U39_05995 PF00270 DEAD/DEAH box helicase C2U39_06005 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U39_06005 PF12008 Type I restriction and modification enzyme - subunit R C terminal C2U39_06005 PF18766 SWI2/SNF2 ATPase C2U39_06030 PF02371 Transposase IS116/IS110/IS902 family C2U39_06030 PF01548 Transposase C2U39_06035 PF12728 Helix-turn-helix domain C2U39_06040 PF00011 Hsp20/alpha crystallin family C2U39_06045 PF17871 AAA lid domain C2U39_06045 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_06045 PF02861 Clp amino terminal domain, pathogenicity island component C2U39_06045 PF10431 C-terminal, D2-small domain, of ClpB protein C2U39_06045 PF07724 AAA domain (Cdc48 subfamily) C2U39_06050 PF13091 PLD-like domain C2U39_06060 PF00085 Thioredoxin C2U39_06065 PF00563 EAL domain C2U39_06065 PF03707 Bacterial signalling protein N terminal repeat C2U39_06065 PF00990 Diguanylate cyclase, GGDEF domain C2U39_06075 PF01435 Peptidase family M48 C2U39_06080 PF17820 PDZ domain C2U39_06080 PF13180 PDZ domain C2U39_06125 PF01381 Helix-turn-helix C2U39_06145 PF13356 Arm DNA-binding domain C2U39_06145 PF00589 Phage integrase family C2U39_06150 PF01926 50S ribosome-binding GTPase C2U39_06150 PF06071 Protein of unknown function (DUF933) C2U39_06155 PF01195 Peptidyl-tRNA hydrolase C2U39_06160 PF14572 Phosphoribosyl synthetase-associated domain C2U39_06160 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C2U39_06170 PF00288 GHMP kinases N terminal domain C2U39_06170 PF08544 GHMP kinases C terminal C2U39_06175 PF03550 Outer membrane lipoprotein LolB C2U39_06180 PF01488 Shikimate / quinate 5-dehydrogenase C2U39_06180 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C2U39_06180 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C2U39_06185 PF03462 PCRF domain C2U39_06185 PF00472 RF-1 domain C2U39_06190 PF13847 Methyltransferase domain C2U39_06190 PF17827 PrmC N-terminal domain C2U39_06200 PF13369 Transglutaminase-like superfamily C2U39_06205 PF00793 DAHP synthetase I family C2U39_06210 PF00375 Sodium:dicarboxylate symporter family C2U39_06215 PF01228 Glycine radical C2U39_06220 PF03167 Uracil DNA glycosylase superfamily C2U39_06235 PF00923 Transaldolase/Fructose-6-phosphate aldolase C2U39_06240 PF01235 Sodium:alanine symporter family C2U39_06250 PF00144 Beta-lactamase C2U39_06255 PF07690 Major Facilitator Superfamily C2U39_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_06260 PF03466 LysR substrate binding domain C2U39_06265 PF03652 Holliday junction resolvase C2U39_06270 PF02622 Uncharacterized ACR, COG1678 C2U39_06275 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C2U39_06275 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C2U39_06280 PF04452 RNA methyltransferase C2U39_06285 PF04231 Endonuclease I C2U39_06290 PF17283 SprT-like zinc ribbon domain C2U39_06290 PF10263 SprT-like family C2U39_06295 PF00438 S-adenosylmethionine synthetase, N-terminal domain C2U39_06295 PF02773 S-adenosylmethionine synthetase, C-terminal domain C2U39_06295 PF02772 S-adenosylmethionine synthetase, central domain C2U39_06300 PF02780 Transketolase, C-terminal domain C2U39_06300 PF02779 Transketolase, pyrimidine binding domain C2U39_06300 PF00456 Transketolase, thiamine diphosphate binding domain C2U39_06310 PF01042 Endoribonuclease L-PSP C2U39_06330 PF03702 Anhydro-N-acetylmuramic acid kinase C2U39_06335 PF01551 Peptidase family M23 C2U39_06335 PF08525 Opacity-associated protein A N-terminal motif C2U39_06335 PF01476 LysM domain C2U39_06340 PF00579 tRNA synthetases class I (W and Y) C2U39_06350 PF01161 Phosphatidylethanolamine-binding protein C2U39_06360 PF03466 LysR substrate binding domain C2U39_06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_06370 PF00155 Aminotransferase class I and II C2U39_06375 PF07690 Major Facilitator Superfamily C2U39_06380 PF03466 LysR substrate binding domain C2U39_06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_06385 PF00106 short chain dehydrogenase C2U39_06390 PF08496 Peptidase family S49 N-terminal C2U39_06390 PF01343 Peptidase family S49 C2U39_06395 PF04996 Succinylarginine dihydrolase C2U39_06400 PF01751 Toprim domain C2U39_06400 PF01131 DNA topoisomerase C2U39_06400 PF08272 Topoisomerase I zinc-ribbon-like C2U39_06400 PF01396 Topoisomerase DNA binding C4 zinc finger C2U39_06410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_06410 PF08447 PAS fold C2U39_06415 PF00728 Glycosyl hydrolase family 20, catalytic domain C2U39_06415 PF02838 Glycosyl hydrolase family 20, domain 2 C2U39_06420 PF01869 BadF/BadG/BcrA/BcrD ATPase family C2U39_06430 PF00005 ABC transporter C2U39_06430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_06435 PF00005 ABC transporter C2U39_06435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_06440 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_06440 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U39_06445 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_06450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_06455 PF18693 TRAM domain C2U39_06455 PF04055 Radical SAM superfamily C2U39_06455 PF00919 Uncharacterized protein family UPF0004 C2U39_06460 PF00072 Response regulator receiver domain C2U39_06465 PF01022 Bacterial regulatory protein, arsR family C2U39_06470 PF01758 Sodium Bile acid symporter family C2U39_06475 PF03960 ArsC family C2U39_06490 PF02049 Flagellar hook-basal body complex protein FliE C2U39_06495 PF08345 Flagellar M-ring protein C-terminal C2U39_06495 PF01514 Secretory protein of YscJ/FliF family C2U39_06500 PF14842 FliG N-terminal domain C2U39_06500 PF14841 FliG middle domain C2U39_06500 PF01706 FliG C-terminal domain C2U39_06510 PF18269 T3SS EscN ATPase C-terminal domain C2U39_06510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U39_06530 PF02154 Flagellar motor switch protein FliM C2U39_06530 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U39_06535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U39_06540 PF04347 Flagellar biosynthesis protein, FliO C2U39_06545 PF00813 FliP family C2U39_06550 PF01313 Bacterial export proteins, family 3 C2U39_06555 PF01311 Bacterial export proteins, family 1 C2U39_06560 PF01312 FlhB HrpN YscU SpaS Family C2U39_06565 PF00771 FHIPEP family C2U39_06570 PF00448 SRP54-type protein, GTPase domain C2U39_06575 PF10609 NUBPL iron-transfer P-loop NTPase C2U39_06580 PF04542 Sigma-70 region 2 C2U39_06580 PF04539 Sigma-70 region 3 C2U39_06580 PF04545 Sigma-70, region 4 C2U39_06585 PF00072 Response regulator receiver domain C2U39_06590 PF04344 Chemotaxis phosphatase, CheZ C2U39_06595 PF02895 Signal transducing histidine kinase, homodimeric domain C2U39_06595 PF01584 CheW-like domain C2U39_06595 PF01627 Hpt domain C2U39_06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_06595 PF07194 P2 response regulator binding domain C2U39_06600 PF01339 CheB methylesterase C2U39_06600 PF00072 Response regulator receiver domain C2U39_06605 PF01618 MotA/TolQ/ExbB proton channel family C2U39_06610 PF00691 OmpA family C2U39_06610 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U39_06615 PF13614 AAA domain C2U39_06625 PF01584 CheW-like domain C2U39_06635 PF00005 ABC transporter C2U39_06640 PF03379 CcmB protein C2U39_06645 PF01578 Cytochrome C assembly protein C2U39_06650 PF04995 Heme exporter protein D (CcmD) C2U39_06655 PF03100 CcmE C2U39_06660 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C2U39_06660 PF01578 Cytochrome C assembly protein C2U39_06665 PF08534 Redoxin C2U39_06670 PF03918 Cytochrome C biogenesis protein C2U39_06680 PF04333 MlaA lipoprotein C2U39_06685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2U39_06685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2U39_06690 PF00462 Glutaredoxin C2U39_06695 PF01189 16S rRNA methyltransferase RsmB/F C2U39_06695 PF01029 NusB family C2U39_06710 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C2U39_06710 PF01243 Pyridoxamine 5'-phosphate oxidase C2U39_06715 PF03466 LysR substrate binding domain C2U39_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_06720 PF01546 Peptidase family M20/M25/M40 C2U39_06740 PF13508 Acetyltransferase (GNAT) domain C2U39_06810 PF13099 Domain of unknown function (DUF3944) C2U39_06810 PF03981 Ubiquinol-cytochrome C chaperone C2U39_06840 PF13356 Arm DNA-binding domain C2U39_06840 PF00589 Phage integrase family C2U39_06840 PF14659 Phage integrase, N-terminal SAM-like domain C2U39_06850 PF01668 SmpB protein C2U39_06855 PF03364 Polyketide cyclase / dehydrase and lipid transport C2U39_06865 PF13460 NAD(P)H-binding C2U39_06870 PF04355 SmpA / OmlA family C2U39_06875 PF00465 Iron-containing alcohol dehydrogenase C2U39_06880 PF01048 Phosphorylase superfamily C2U39_06885 PF00849 RNA pseudouridylate synthase C2U39_06890 PF01156 Inosine-uridine preferring nucleoside hydrolase C2U39_06905 PF07509 Protein of unknown function (DUF1523) C2U39_06910 PF00672 HAMP domain C2U39_06910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_06915 PF01810 LysE type translocator C2U39_06925 PF02080 TrkA-C domain C2U39_06925 PF00999 Sodium/hydrogen exchanger family C2U39_06925 PF03471 Transporter associated domain C2U39_06935 PF02557 D-alanyl-D-alanine carboxypeptidase C2U39_06940 PF01546 Peptidase family M20/M25/M40 C2U39_06940 PF07687 Peptidase dimerisation domain C2U39_06945 PF03960 ArsC family C2U39_06960 PF03606 C4-dicarboxylate anaerobic carrier C2U39_06965 PF01546 Peptidase family M20/M25/M40 C2U39_06965 PF07687 Peptidase dimerisation domain C2U39_06975 PF03605 Anaerobic c4-dicarboxylate membrane transporter C2U39_06980 PF01336 OB-fold nucleic acid binding domain C2U39_06980 PF00152 tRNA synthetases class II (D, K and N) C2U39_07000 PF06968 Biotin and Thiamin Synthesis associated domain C2U39_07000 PF04055 Radical SAM superfamily C2U39_07005 PF00155 Aminotransferase class I and II C2U39_07010 PF12697 Alpha/beta hydrolase family C2U39_07010 PF08241 Methyltransferase domain C2U39_07020 PF01435 Peptidase family M48 C2U39_07025 PF03473 MOSC domain C2U39_07025 PF03476 MOSC N-terminal beta barrel domain C2U39_07025 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U39_07025 PF03473 MOSC domain C2U39_07025 PF03476 MOSC N-terminal beta barrel domain C2U39_07025 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U39_07030 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2U39_07030 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_07030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C2U39_07035 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C2U39_07035 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C2U39_07035 PF10371 Domain of unknown function C2U39_07035 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C2U39_07035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U39_07050 PF01554 MatE C2U39_07070 PF00291 Pyridoxal-phosphate dependent enzyme C2U39_07075 PF00465 Iron-containing alcohol dehydrogenase C2U39_07085 PF08359 YsiA-like protein, C-terminal region C2U39_07085 PF00440 Bacterial regulatory proteins, tetR family C2U39_07090 PF00171 Aldehyde dehydrogenase family C2U39_07100 PF00877 NlpC/P60 family C2U39_07105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_07105 PF03466 LysR substrate binding domain C2U39_07125 PF08003 Protein of unknown function (DUF1698) C2U39_07130 PF13649 Methyltransferase domain C2U39_07135 PF01904 Protein of unknown function DUF72 C2U39_07145 PF01336 OB-fold nucleic acid binding domain C2U39_07145 PF02938 GAD domain C2U39_07145 PF00152 tRNA synthetases class II (D, K and N) C2U39_07150 PF01709 Transcriptional regulator C2U39_07155 PF08019 Phosphoethanolamine transferase EptA/EptB C2U39_07155 PF00884 Sulfatase C2U39_07160 PF01047 MarR family C2U39_07160 PF00480 ROK family C2U39_07165 PF01979 Amidohydrolase family C2U39_07170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C2U39_07175 PF00367 phosphotransferase system, EIIB C2U39_07175 PF02378 Phosphotransferase system, EIIC C2U39_07175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U39_07180 PF00728 Glycosyl hydrolase family 20, catalytic domain C2U39_07180 PF02838 Glycosyl hydrolase family 20, domain 2 C2U39_07180 PF03173 Putative carbohydrate binding domain C2U39_07180 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C2U39_07185 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U39_07185 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C2U39_07190 PF01475 Ferric uptake regulator family C2U39_07200 PF00258 Flavodoxin C2U39_07205 PF01402 Ribbon-helix-helix protein, copG family C2U39_07215 PF12697 Alpha/beta hydrolase family C2U39_07220 PF03925 SeqA protein C-terminal domain C2U39_07220 PF17206 SeqA protein N-terminal domain C2U39_07225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2U39_07225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2U39_07225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2U39_07225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2U39_07235 PF01047 MarR family C2U39_07240 PF13406 Transglycosylase SLT domain C2U39_07245 PF01066 CDP-alcohol phosphatidyltransferase C2U39_07260 PF13416 Bacterial extracellular solute-binding protein C2U39_07265 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_07265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U39_07265 PF00403 Heavy-metal-associated domain C2U39_07270 PF02627 Carboxymuconolactone decarboxylase family C2U39_07290 PF01103 Surface antigen C2U39_07290 PF07244 Surface antigen variable number repeat C2U39_07290 PF17243 POTRA domain TamA domain 1 C2U39_07295 PF04357 TamB, inner membrane protein subunit of TAM complex C2U39_07315 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C2U39_07320 PF00990 Diguanylate cyclase, GGDEF domain C2U39_07320 PF00563 EAL domain C2U39_07320 PF03707 Bacterial signalling protein N terminal repeat C2U39_07330 PF01464 Transglycosylase SLT domain C2U39_07330 PF14718 Soluble lytic murein transglycosylase L domain C2U39_07335 PF00356 Bacterial regulatory proteins, lacI family C2U39_07345 PF03061 Thioesterase superfamily C2U39_07355 PF03372 Endonuclease/Exonuclease/phosphatase family C2U39_07360 PF01476 LysM domain C2U39_07360 PF01464 Transglycosylase SLT domain C2U39_07365 PF16123 Hydroxyacylglutathione hydrolase C-terminus C2U39_07365 PF00753 Metallo-beta-lactamase superfamily C2U39_07370 PF08241 Methyltransferase domain C2U39_07375 PF00075 RNase H C2U39_07380 PF00929 Exonuclease C2U39_07390 PF11849 Domain of unknown function (DUF3369) C2U39_07395 PF02770 Acyl-CoA dehydrogenase, middle domain C2U39_07395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U39_07395 PF09317 Domain of unknown function (DUF1974) C2U39_07395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U39_07400 PF13580 SIS domain C2U39_07405 PF13230 Glutamine amidotransferases class-II C2U39_07415 PF01933 Uncharacterised protein family UPF0052 C2U39_07425 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U39_07425 PF00512 His Kinase A (phospho-acceptor) domain C2U39_07425 PF00072 Response regulator receiver domain C2U39_07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_07440 PF00196 Bacterial regulatory proteins, luxR family C2U39_07440 PF00072 Response regulator receiver domain C2U39_07445 PF00672 HAMP domain C2U39_07445 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C2U39_07445 PF07730 Histidine kinase C2U39_07445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_07450 PF06463 Molybdenum Cofactor Synthesis C C2U39_07450 PF04055 Radical SAM superfamily C2U39_07455 PF12800 4Fe-4S binding domain C2U39_07455 PF00037 4Fe-4S binding domain C2U39_07455 PF13187 4Fe-4S dicluster domain C2U39_07465 PF01568 Molydopterin dinucleotide binding domain C2U39_07465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U39_07465 PF00384 Molybdopterin oxidoreductase C2U39_07465 PF10518 TAT (twin-arginine translocation) pathway signal sequence C2U39_07470 PF12838 4Fe-4S dicluster domain C2U39_07470 PF12800 4Fe-4S binding domain C2U39_07475 PF13237 4Fe-4S dicluster domain C2U39_07475 PF12801 4Fe-4S binding domain C2U39_07480 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C2U39_07485 PF03264 NapC/NirT cytochrome c family, N-terminal region C2U39_07490 PF00994 Probable molybdopterin binding domain C2U39_07495 PF01967 MoaC family C2U39_07500 PF02597 ThiS family C2U39_07505 PF02391 MoaE protein C2U39_07515 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_07520 PF03459 TOBE domain C2U39_07520 PF00005 ABC transporter C2U39_07525 PF12697 Alpha/beta hydrolase family C2U39_07530 PF06406 StbA protein C2U39_07540 PF00899 ThiF family C2U39_07545 PF03453 MoeA N-terminal region (domain I and II) C2U39_07545 PF00994 Probable molybdopterin binding domain C2U39_07545 PF03454 MoeA C-terminal region (domain IV) C2U39_07550 PF01227 GTP cyclohydrolase I C2U39_07555 PF00672 HAMP domain C2U39_07555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_07555 PF17200 Single Cache domain 2 C2U39_07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_07580 PF03466 LysR substrate binding domain C2U39_07585 PF04264 YceI-like domain C2U39_07610 PF07687 Peptidase dimerisation domain C2U39_07610 PF01546 Peptidase family M20/M25/M40 C2U39_07620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U39_07620 PF17944 Arginine decarboxylase C-terminal helical extension C2U39_07620 PF17810 Arginine decarboxylase helical bundle domain C2U39_07635 PF00563 EAL domain C2U39_07635 PF00990 Diguanylate cyclase, GGDEF domain C2U39_07635 PF03707 Bacterial signalling protein N terminal repeat C2U39_07640 PF00300 Histidine phosphatase superfamily (branch 1) C2U39_07645 PF01844 HNH endonuclease C2U39_07660 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C2U39_07660 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2U39_07665 PF01479 S4 domain C2U39_07665 PF00849 RNA pseudouridylate synthase C2U39_07670 PF07690 Major Facilitator Superfamily C2U39_07680 PF03466 LysR substrate binding domain C2U39_07680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_07700 PF04391 Protein of unknown function (DUF533) C2U39_07710 PF00392 Bacterial regulatory proteins, gntR family C2U39_07710 PF00155 Aminotransferase class I and II C2U39_07715 PF01654 Cytochrome bd terminal oxidase subunit I C2U39_07720 PF02322 Cytochrome bd terminal oxidase subunit II C2U39_07730 PF07690 Major Facilitator Superfamily C2U39_07735 PF00248 Aldo/keto reductase family C2U39_07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_07755 PF03466 LysR substrate binding domain C2U39_07760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C2U39_07760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C2U39_07765 PF00230 Major intrinsic protein C2U39_07770 PF07690 Major Facilitator Superfamily C2U39_07775 PF08220 DeoR-like helix-turn-helix domain C2U39_07775 PF00455 DeoR C terminal sensor domain C2U39_07780 PF01266 FAD dependent oxidoreductase C2U39_07780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C2U39_07785 PF03009 Glycerophosphoryl diester phosphodiesterase family C2U39_07790 PF00793 DAHP synthetase I family C2U39_07795 PF01817 Chorismate mutase type II C2U39_07795 PF02153 Prephenate dehydrogenase C2U39_07800 PF03466 LysR substrate binding domain C2U39_07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_07805 PF04219 Protein of unknown function, DUF C2U39_07810 PF03974 Ecotin C2U39_07830 PF00326 Prolyl oligopeptidase family C2U39_07830 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2U39_07835 PF00593 TonB dependent receptor C2U39_07835 PF07715 TonB-dependent Receptor Plug Domain C2U39_07840 PF00884 Sulfatase C2U39_07840 PF11893 Domain of unknown function (DUF3413) C2U39_07845 PF07208 Protein of unknown function (DUF1414) C2U39_07850 PF04245 37-kD nucleoid-associated bacterial protein C2U39_07855 PF01547 Bacterial extracellular solute-binding protein C2U39_07860 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_07860 PF14785 Maltose transport system permease protein MalF P2 domain C2U39_07865 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_07870 PF08402 TOBE domain C2U39_07870 PF00005 ABC transporter C2U39_07875 PF03976 Polyphosphate kinase 2 (PPK2) C2U39_07880 PF00561 alpha/beta hydrolase fold C2U39_07890 PF01594 AI-2E family transporter C2U39_07895 PF01206 Sulfurtransferase TusA C2U39_07900 PF13181 Tetratricopeptide repeat C2U39_07900 PF01435 Peptidase family M48 C2U39_07905 PF00578 AhpC/TSA family C2U39_07910 PF03960 ArsC family C2U39_07925 PF04336 Acyl carrier protein phosphodiesterase C2U39_07935 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_07940 PF01979 Amidohydrolase family C2U39_07945 PF03956 Lysine exporter LysO C2U39_07950 PF00005 ABC transporter C2U39_07955 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_07960 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_07965 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_07975 PF04055 Radical SAM superfamily C2U39_07980 PF03707 Bacterial signalling protein N terminal repeat C2U39_07980 PF00563 EAL domain C2U39_07980 PF00990 Diguanylate cyclase, GGDEF domain C2U39_07985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U39_07985 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_08000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_08000 PF00529 HlyD membrane-fusion protein of T1SS C2U39_08005 PF02321 Outer membrane efflux protein C2U39_08010 PF01594 AI-2E family transporter C2U39_08015 PF07678 A-macroglobulin TED domain C2U39_08015 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C2U39_08015 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C2U39_08015 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C2U39_08015 PF17962 Bacterial macroglobulin domain 6 C2U39_08015 PF01835 MG2 domain C2U39_08015 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C2U39_08015 PF07703 Alpha-2-macroglobulin bait region domain C2U39_08015 PF00207 Alpha-2-macroglobulin family C2U39_08020 PF06832 Penicillin-Binding Protein C-terminus Family C2U39_08020 PF00912 Transglycosylase C2U39_08020 PF00905 Penicillin binding protein transpeptidase domain C2U39_08030 PF02568 Thiamine biosynthesis protein (ThiI) C2U39_08030 PF02926 THUMP domain C2U39_08040 PF03458 UPF0126 domain C2U39_08045 PF00669 Bacterial flagellin N-terminal helical region C2U39_08045 PF07196 Flagellin hook IN motif C2U39_08045 PF00700 Bacterial flagellin C-terminal helical region C2U39_08050 PF00700 Bacterial flagellin C-terminal helical region C2U39_08050 PF07196 Flagellin hook IN motif C2U39_08050 PF00669 Bacterial flagellin N-terminal helical region C2U39_08060 PF07195 Flagellar hook-associated protein 2 C-terminus C2U39_08060 PF07196 Flagellin hook IN motif C2U39_08060 PF02465 Flagellar hook-associated protein 2 N-terminus C2U39_08065 PF02561 Flagellar protein FliS C2U39_08085 PF08666 SAF domain C2U39_08085 PF03102 NeuB family C2U39_08100 PF00202 Aminotransferase class-III C2U39_08105 PF02348 Cytidylyltransferase C2U39_08115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2U39_08120 PF02719 Polysaccharide biosynthesis protein C2U39_08125 PF01497 Periplasmic binding protein C2U39_08135 PF01048 Phosphorylase superfamily C2U39_08145 PF02535 ZIP Zinc transporter C2U39_08150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_08150 PF00672 HAMP domain C2U39_08150 PF12729 Four helix bundle sensory module for signal transduction C2U39_08155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U39_08160 PF10576 Iron-sulfur binding domain of endonuclease III C2U39_08160 PF00633 Helix-hairpin-helix motif C2U39_08160 PF00730 HhH-GPD superfamily base excision DNA repair protein C2U39_08165 PF02508 Rnf-Nqr subunit, membrane protein C2U39_08170 PF04205 FMN-binding domain C2U39_08175 PF03116 NQR2, RnfD, RnfE family C2U39_08180 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C2U39_08180 PF12838 4Fe-4S dicluster domain C2U39_08180 PF10531 SLBB domain C2U39_08180 PF13375 RnfC Barrel sandwich hybrid domain C2U39_08185 PF04060 Putative Fe-S cluster C2U39_08190 PF02508 Rnf-Nqr subunit, membrane protein C2U39_08195 PF00892 EamA-like transporter family C2U39_08205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_08205 PF08447 PAS fold C2U39_08205 PF13426 PAS domain C2U39_08215 PF12241 Trans-2-enoyl-CoA reductase catalytic region C2U39_08215 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C2U39_08215 PF07055 Enoyl reductase FAD binding domain C2U39_08220 PF03606 C4-dicarboxylate anaerobic carrier C2U39_08225 PF00155 Aminotransferase class I and II C2U39_08235 PF00462 Glutaredoxin C2U39_08240 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C2U39_08245 PF00271 Helicase conserved C-terminal domain C2U39_08245 PF04851 Type III restriction enzyme, res subunit C2U39_08250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_08250 PF00529 HlyD membrane-fusion protein of T1SS C2U39_08255 PF11742 Protein of unknown function (DUF3302) C2U39_08260 PF12794 Mechanosensitive ion channel inner membrane domain 1 C2U39_08260 PF12795 Mechanosensitive ion channel porin domain C2U39_08260 PF00924 Mechanosensitive ion channel C2U39_08265 PF02554 Carbon starvation protein CstA C2U39_08270 PF04397 LytTr DNA-binding domain C2U39_08270 PF00072 Response regulator receiver domain C2U39_08275 PF07694 5TMR of 5TMR-LYT C2U39_08275 PF06580 Histidine kinase C2U39_08280 PF00072 Response regulator receiver domain C2U39_08285 PF00465 Iron-containing alcohol dehydrogenase C2U39_08285 PF00171 Aldehyde dehydrogenase family C2U39_08290 PF01914 MarC family integral membrane protein C2U39_08295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_08300 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_08305 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_08305 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U39_08310 PF00005 ABC transporter C2U39_08310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_08315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_08315 PF00005 ABC transporter C2U39_08320 PF03741 Integral membrane protein TerC family C2U39_08325 PF00842 Alanine racemase, C-terminal domain C2U39_08325 PF01168 Alanine racemase, N-terminal domain C2U39_08335 PF00375 Sodium:dicarboxylate symporter family C2U39_08355 PF01979 Amidohydrolase family C2U39_08365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_08365 PF00672 HAMP domain C2U39_08370 PF01230 HIT domain C2U39_08405 PF07549 SecD/SecF GG Motif C2U39_08405 PF13721 SecD export protein N-terminal TM region C2U39_08405 PF02355 Protein export membrane protein C2U39_08410 PF07549 SecD/SecF GG Motif C2U39_08410 PF02355 Protein export membrane protein C2U39_08415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_08415 PF08447 PAS fold C2U39_08415 PF13426 PAS domain C2U39_08425 PF05661 Protein of unknown function (DUF808) C2U39_08430 PF08439 Oligopeptidase F C2U39_08430 PF01432 Peptidase family M3 C2U39_08435 PF01432 Peptidase family M3 C2U39_08435 PF08439 Oligopeptidase F C2U39_08440 PF05728 Uncharacterised protein family (UPF0227) C2U39_08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_08455 PF01906 Putative heavy-metal-binding C2U39_08460 PF00884 Sulfatase C2U39_08470 PF01842 ACT domain C2U39_08470 PF00696 Amino acid kinase family C2U39_08475 PF00696 Amino acid kinase family C2U39_08475 PF00583 Acetyltransferase (GNAT) family C2U39_08480 PF01625 Peptide methionine sulfoxide reductase C2U39_08505 PF03466 LysR substrate binding domain C2U39_08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_08510 PF02652 L-lactate permease C2U39_08515 PF02754 Cysteine-rich domain C2U39_08520 PF11870 Domain of unknown function (DUF3390) C2U39_08520 PF13183 4Fe-4S dicluster domain C2U39_08520 PF02589 LUD domain C2U39_08525 PF02589 LUD domain C2U39_08530 PF01565 FAD binding domain C2U39_08530 PF02913 FAD linked oxidases, C-terminal domain C2U39_08545 PF00313 'Cold-shock' DNA-binding domain C2U39_08560 PF00005 ABC transporter C2U39_08570 PF03600 Citrate transporter C2U39_08580 PF07690 Major Facilitator Superfamily C2U39_08600 PF01593 Flavin containing amine oxidoreductase C2U39_08605 PF03239 Iron permease FTR1 family C2U39_08635 PF04168 A predicted alpha-helical domain with a conserved ER motif. C2U39_08635 PF14403 Circularly permuted ATP-grasp type 2 C2U39_08640 PF14403 Circularly permuted ATP-grasp type 2 C2U39_08650 PF00106 short chain dehydrogenase C2U39_08680 PF00916 Sulfate permease family C2U39_08680 PF01740 STAS domain C2U39_08730 PF01609 Transposase DDE domain C2U39_08730 PF05598 Transposase domain (DUF772) C2U39_08745 PF11867 Domain of unknown function (DUF3387) C2U39_08745 PF18766 SWI2/SNF2 ATPase C2U39_08745 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U39_08750 PF05762 VWA domain containing CoxE-like protein C2U39_08755 PF07728 AAA domain (dynein-related subfamily) C2U39_08755 PF17868 AAA lid domain C2U39_08755 PF12592 Protein of unknown function (DUF3763) C2U39_08760 PF02810 SEC-C motif C2U39_08760 PF03695 Uncharacterised protein family (UPF0149) C2U39_08770 PF01609 Transposase DDE domain C2U39_08770 PF05598 Transposase domain (DUF772) C2U39_08795 PF00665 Integrase core domain C2U39_08855 PF10431 C-terminal, D2-small domain, of ClpB protein C2U39_08855 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_08855 PF17871 AAA lid domain C2U39_08855 PF07724 AAA domain (Cdc48 subfamily) C2U39_08860 PF02954 Bacterial regulatory protein, Fis family C2U39_08860 PF00158 Sigma-54 interaction domain C2U39_08860 PF02830 V4R domain C2U39_08860 PF06505 Activator of aromatic catabolism C2U39_08890 PF04717 Type VI secretion system, phage-baseplate injector C2U39_08895 PF07517 SecA DEAD-like domain C2U39_08895 PF01043 SecA preprotein cross-linking domain C2U39_08895 PF07516 SecA Wing and Scaffold domain C2U39_08910 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C2U39_08910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2U39_08915 PF13247 4Fe-4S dicluster domain C2U39_08920 PF03916 Polysulphide reductase, NrfD C2U39_08925 PF00374 Nickel-dependent hydrogenase C2U39_08930 PF01750 Hydrogenase maturation protease C2U39_08935 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE C2U39_08940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_08945 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_08950 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_08950 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U39_08955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_08955 PF00005 ABC transporter C2U39_08960 PF00005 ABC transporter C2U39_08960 PF08402 TOBE domain C2U39_08965 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2U39_08970 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C2U39_08975 PF00586 AIR synthase related protein, N-terminal domain C2U39_08975 PF02769 AIR synthase related protein, C-terminal domain C2U39_08980 PF01924 Hydrogenase formation hypA family C2U39_08985 PF01455 HupF/HypC family C2U39_08990 PF07503 HypF finger C2U39_08990 PF01300 Telomere recombination C2U39_08990 PF17788 HypF Kae1-like domain C2U39_08990 PF00708 Acylphosphatase C2U39_09000 PF02705 K+ potassium transporter C2U39_09025 PF02132 RecR protein C2U39_09025 PF13662 Toprim domain C2U39_09030 PF00183 Hsp90 protein C2U39_09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_09035 PF05191 Adenylate kinase, active site lid C2U39_09040 PF00762 Ferrochelatase C2U39_09045 PF01124 MAPEG family C2U39_09050 PF00294 pfkB family carbohydrate kinase C2U39_09055 PF00672 HAMP domain C2U39_09055 PF17200 Single Cache domain 2 C2U39_09055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_09070 PF00563 EAL domain C2U39_09070 PF03707 Bacterial signalling protein N terminal repeat C2U39_09070 PF00990 Diguanylate cyclase, GGDEF domain C2U39_09075 PF00483 Nucleotidyl transferase C2U39_09085 PF07273 Protein of unknown function (DUF1439) C2U39_09090 PF00425 chorismate binding enzyme C2U39_09095 PF13193 AMP-binding enzyme C-terminal domain C2U39_09095 PF00501 AMP-binding enzyme C2U39_09100 PF00857 Isochorismatase family C2U39_09100 PF00550 Phosphopantetheine attachment site C2U39_09105 PF13193 AMP-binding enzyme C-terminal domain C2U39_09105 PF00550 Phosphopantetheine attachment site C2U39_09105 PF00975 Thioesterase domain C2U39_09105 PF00668 Condensation domain C2U39_09105 PF00501 AMP-binding enzyme C2U39_09120 PF00975 Thioesterase domain C2U39_09120 PF00668 Condensation domain C2U39_09120 PF13193 AMP-binding enzyme C-terminal domain C2U39_09120 PF00501 AMP-binding enzyme C2U39_09120 PF00550 Phosphopantetheine attachment site C2U39_09125 PF01497 Periplasmic binding protein C2U39_09130 PF01648 4'-phosphopantetheinyl transferase superfamily C2U39_09130 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C2U39_09135 PF00005 ABC transporter C2U39_09140 PF01032 FecCD transport family C2U39_09145 PF01032 FecCD transport family C2U39_09165 PF11143 Protein of unknown function (DUF2919) C2U39_09170 PF01544 CorA-like Mg2+ transporter protein C2U39_09180 PF01012 Electron transfer flavoprotein domain C2U39_09185 PF00766 Electron transfer flavoprotein FAD-binding domain C2U39_09185 PF01012 Electron transfer flavoprotein domain C2U39_09190 PF00266 Aminotransferase class-V C2U39_09195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2U39_09200 PF00793 DAHP synthetase I family C2U39_09205 PF03741 Integral membrane protein TerC family C2U39_09215 PF08891 YfcL protein C2U39_09220 PF00501 AMP-binding enzyme C2U39_09225 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C2U39_09225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2U39_09230 PF04172 LrgB-like family C2U39_09235 PF03788 LrgA family C2U39_09250 PF00929 Exonuclease C2U39_09250 PF08411 Exonuclease C-terminal C2U39_09280 PF13990 YjcZ-like protein C2U39_09295 PF00444 Ribosomal protein L36 C2U39_09300 PF01197 Ribosomal protein L31 C2U39_09315 PF01863 Protein of unknown function DUF45 C2U39_09330 PF03606 C4-dicarboxylate anaerobic carrier C2U39_09340 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C2U39_09340 PF01266 FAD dependent oxidoreductase C2U39_09345 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U39_09345 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U39_09360 PF00285 Citrate synthase, C-terminal domain C2U39_09365 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2U39_09370 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2U39_09375 PF02910 Fumarate reductase flavoprotein C-term C2U39_09375 PF00890 FAD binding domain C2U39_09380 PF13085 2Fe-2S iron-sulfur cluster binding domain C2U39_09385 PF16078 2-oxoglutarate dehydrogenase N-terminus C2U39_09385 PF16870 2-oxoglutarate dehydrogenase C-terminal C2U39_09385 PF02779 Transketolase, pyrimidine binding domain C2U39_09385 PF00676 Dehydrogenase E1 component C2U39_09390 PF00364 Biotin-requiring enzyme C2U39_09390 PF02817 e3 binding domain C2U39_09390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U39_09395 PF00549 CoA-ligase C2U39_09395 PF08442 ATP-grasp domain C2U39_09400 PF02629 CoA binding domain C2U39_09400 PF00549 CoA-ligase C2U39_09410 PF03692 Putative zinc- or iron-chelating domain C2U39_09415 PF02901 Pyruvate formate lyase-like C2U39_09415 PF01228 Glycine radical C2U39_09420 PF01226 Formate/nitrite transporter C2U39_09425 PF18381 YcaO cyclodehydratase C-terminal domain C2U39_09425 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C2U39_09435 PF00893 Small Multidrug Resistance protein C2U39_09440 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U39_09440 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U39_09445 PF00313 'Cold-shock' DNA-binding domain C2U39_09450 PF02617 ATP-dependent Clp protease adaptor protein ClpS C2U39_09455 PF07724 AAA domain (Cdc48 subfamily) C2U39_09455 PF17871 AAA lid domain C2U39_09455 PF10431 C-terminal, D2-small domain, of ClpB protein C2U39_09455 PF02861 Clp amino terminal domain, pathogenicity island component C2U39_09455 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_09460 PF01176 Translation initiation factor 1A / IF-1 C2U39_09465 PF04377 Arginine-tRNA-protein transferase, C terminus C2U39_09465 PF04376 Arginine-tRNA-protein transferase, N terminus C2U39_09470 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C2U39_09475 PF05433 Glycine zipper 2TM domain C2U39_09480 PF05230 MASE2 domain C2U39_09480 PF00990 Diguanylate cyclase, GGDEF domain C2U39_09485 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_09490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2U39_09490 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2U39_09495 PF01037 Lrp/AsnC ligand binding domain C2U39_09500 PF09397 Ftsk gamma domain C2U39_09500 PF17854 FtsK alpha domain C2U39_09500 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C2U39_09500 PF01580 FtsK/SpoIIIE family C2U39_09505 PF03548 Outer membrane lipoprotein carrier protein LolA C2U39_09510 PF12002 MgsA AAA+ ATPase C terminal C2U39_09510 PF16193 AAA C-terminal domain C2U39_09510 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_09515 PF02403 Seryl-tRNA synthetase N-terminal domain C2U39_09515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U39_09520 PF02674 Colicin V production protein C2U39_09525 PF00156 Phosphoribosyl transferase domain C2U39_09530 PF00232 Glycosyl hydrolase family 1 C2U39_09535 PF02378 Phosphotransferase system, EIIC C2U39_09535 PF00367 phosphotransferase system, EIIB C2U39_09540 PF00356 Bacterial regulatory proteins, lacI family C2U39_09545 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C2U39_09550 PF00005 ABC transporter C2U39_09555 PF00005 ABC transporter C2U39_09555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_09560 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U39_09560 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_09565 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_09570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_09575 PF00158 Sigma-54 interaction domain C2U39_09575 PF02954 Bacterial regulatory protein, Fis family C2U39_09580 PF04012 PspA/IM30 family C2U39_09585 PF06667 Phage shock protein B C2U39_09595 PF04317 YcjX-like family, DUF463 C2U39_09600 PF05128 Domain of unknown function (DUF697) C2U39_09605 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C2U39_09610 PF01329 Pterin 4 alpha carbinolamine dehydratase C2U39_09615 PF00158 Sigma-54 interaction domain C2U39_09615 PF18024 Helix-turn-helix domain C2U39_09620 PF13689 YfiR/HmsC-like C2U39_09625 PF00990 Diguanylate cyclase, GGDEF domain C2U39_09625 PF00563 EAL domain C2U39_09625 PF03707 Bacterial signalling protein N terminal repeat C2U39_09630 PF00691 OmpA family C2U39_09635 PF04055 Radical SAM superfamily C2U39_09640 PF13742 OB-fold nucleic acid binding domain C2U39_09640 PF02601 Exonuclease VII, large subunit C2U39_09650 PF02472 Biopolymer transport protein ExbD/TolR C2U39_09655 PF01618 MotA/TolQ/ExbB proton channel family C2U39_09665 PF00128 Alpha amylase, catalytic domain C2U39_09665 PF01373 Glycosyl hydrolase family 14 C2U39_09665 PF03423 Carbohydrate binding domain (family 25) C2U39_09675 PF00571 CBS domain C2U39_09675 PF00478 IMP dehydrogenase / GMP reductase domain C2U39_09680 PF02540 NAD synthase C2U39_09680 PF00958 GMP synthase C terminal domain C2U39_09680 PF00117 Glutamine amidotransferase class-I C2U39_09710 PF02805 Metal binding domain of Ada C2U39_09710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2U39_09710 PF12833 Helix-turn-helix domain C2U39_09710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2U39_09730 PF01047 MarR family C2U39_09740 PF05724 Thiopurine S-methyltransferase (TPMT) C2U39_09745 PF00675 Insulinase (Peptidase family M16) C2U39_09745 PF05193 Peptidase M16 inactive domain C2U39_09745 PF16187 Middle or third domain of peptidase_M16 C2U39_09750 PF00300 Histidine phosphatase superfamily (branch 1) C2U39_09760 PF00892 EamA-like transporter family C2U39_09765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_09770 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C2U39_09775 PF03461 TRCF domain C2U39_09775 PF00271 Helicase conserved C-terminal domain C2U39_09775 PF00270 DEAD/DEAH box helicase C2U39_09775 PF02559 CarD-like/TRCF domain C2U39_09775 PF17757 UvrB interaction domain C2U39_09785 PF02687 FtsX-like permease family C2U39_09785 PF12704 MacB-like periplasmic core domain C2U39_09790 PF00005 ABC transporter C2U39_09795 PF12704 MacB-like periplasmic core domain C2U39_09795 PF02687 FtsX-like permease family C2U39_09815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U39_09815 PF05698 Bacterial trigger factor protein (TF) C-terminus C2U39_09815 PF05697 Bacterial trigger factor protein (TF) C2U39_09820 PF00574 Clp protease C2U39_09825 PF07724 AAA domain (Cdc48 subfamily) C2U39_09825 PF06689 ClpX C4-type zinc finger C2U39_09825 PF10431 C-terminal, D2-small domain, of ClpB protein C2U39_09830 PF02190 ATP-dependent protease La (LON) substrate-binding domain C2U39_09830 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_09830 PF05362 Lon protease (S16) C-terminal proteolytic domain C2U39_09835 PF00216 Bacterial DNA-binding protein C2U39_09840 PF13145 PPIC-type PPIASE domain C2U39_09845 PF12848 ABC transporter C2U39_09845 PF00005 ABC transporter C2U39_09850 PF00474 Sodium:solute symporter family C2U39_09855 PF04341 Protein of unknown function, DUF485 C2U39_09870 PF00378 Enoyl-CoA hydratase/isomerase C2U39_09875 PF01235 Sodium:alanine symporter family C2U39_09885 PF06167 Glucose-regulated metallo-peptidase M90 C2U39_09890 PF01184 GPR1/FUN34/yaaH family C2U39_09900 PF09278 MerR, DNA binding C2U39_09900 PF00376 MerR family regulatory protein C2U39_09905 PF00682 HMGL-like C2U39_09910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U39_09910 PF00364 Biotin-requiring enzyme C2U39_09910 PF02785 Biotin carboxylase C-terminal domain C2U39_09910 PF00289 Biotin carboxylase, N-terminal domain C2U39_09915 PF00378 Enoyl-CoA hydratase/isomerase C2U39_09920 PF01039 Carboxyl transferase domain C2U39_09925 PF02770 Acyl-CoA dehydrogenase, middle domain C2U39_09925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U39_09925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U39_09930 PF00171 Aldehyde dehydrogenase family C2U39_09935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U39_09935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U39_09935 PF02770 Acyl-CoA dehydrogenase, middle domain C2U39_09940 PF00378 Enoyl-CoA hydratase/isomerase C2U39_09945 PF00378 Enoyl-CoA hydratase/isomerase C2U39_09950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C2U39_09950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C2U39_09960 PF13520 Amino acid permease C2U39_09965 PF01925 Sulfite exporter TauE/SafE C2U39_09975 PF12706 Beta-lactamase superfamily domain C2U39_09980 PF02653 Branched-chain amino acid transport system / permease component C2U39_09985 PF02653 Branched-chain amino acid transport system / permease component C2U39_09990 PF00005 ABC transporter C2U39_09995 PF13407 Periplasmic binding protein domain C2U39_10000 PF03466 LysR substrate binding domain C2U39_10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_10010 PF03466 LysR substrate binding domain C2U39_10015 PF02634 FdhD/NarQ family C2U39_10020 PF00384 Molybdopterin oxidoreductase C2U39_10025 PF00072 Response regulator receiver domain C2U39_10025 PF00990 Diguanylate cyclase, GGDEF domain C2U39_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_10030 PF03466 LysR substrate binding domain C2U39_10035 PF00232 Glycosyl hydrolase family 1 C2U39_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_10045 PF03466 LysR substrate binding domain C2U39_10055 PF00933 Glycosyl hydrolase family 3 N terminal domain C2U39_10060 PF01261 Xylose isomerase-like TIM barrel C2U39_10065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U39_10065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2U39_10070 PF03466 LysR substrate binding domain C2U39_10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_10080 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U39_10085 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U39_10095 PF02678 Pirin C2U39_10095 PF05726 Pirin C-terminal cupin domain C2U39_10100 PF00136 DNA polymerase family B C2U39_10100 PF03104 DNA polymerase family B, exonuclease domain C2U39_10130 PF01554 MatE C2U39_10135 PF06786 Uncharacterised protein family (UPF0253) C2U39_10140 PF00677 Lumazine binding domain C2U39_10180 PF03432 Relaxase/Mobilisation nuclease domain C2U39_10180 PF18821 Large polyvalent protein-associated domain 7 C2U39_10240 PF13610 DDE domain C2U39_10260 PF00809 Pterin binding enzyme C2U39_10265 PF00893 Small Multidrug Resistance protein C2U39_10275 PF01909 Nucleotidyltransferase domain C2U39_10275 PF13427 Domain of unknown function (DUF4111) C2U39_10285 PF00589 Phage integrase family C2U39_10285 PF13495 Phage integrase, N-terminal SAM-like domain C2U39_10290 PF13610 DDE domain C2U39_10305 PF13419 Haloacid dehalogenase-like hydrolase C2U39_10310 PF01370 NAD dependent epimerase/dehydratase family C2U39_10310 PF02222 ATP-grasp domain C2U39_10320 PF02525 Flavodoxin-like fold C2U39_10345 PF17783 CvfB-like winged helix domain C2U39_10345 PF13509 S1 domain C2U39_10355 PF04269 Protein of unknown function, DUF440 C2U39_10365 PF00912 Transglycosylase C2U39_10370 PF04269 Protein of unknown function, DUF440 C2U39_10375 PF03776 Septum formation topological specificity factor MinE C2U39_10380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2U39_10385 PF03775 Septum formation inhibitor MinC, C-terminal domain C2U39_10385 PF05209 Septum formation inhibitor MinC, N-terminal domain C2U39_10390 PF05166 YcgL domain C2U39_10395 PF13406 Transglycosylase SLT domain C2U39_10400 PF03315 Serine dehydratase beta chain C2U39_10400 PF03313 Serine dehydratase alpha chain C2U39_10410 PF03315 Serine dehydratase beta chain C2U39_10410 PF03313 Serine dehydratase alpha chain C2U39_10415 PF06865 Pyrimidine/purine nucleoside phosphorylase C2U39_10420 PF00375 Sodium:dicarboxylate symporter family C2U39_10425 PF00376 MerR family regulatory protein C2U39_10425 PF09278 MerR, DNA binding C2U39_10430 PF02803 Thiolase, C-terminal domain C2U39_10430 PF00108 Thiolase, N-terminal domain C2U39_10435 PF08668 HDOD domain C2U39_10435 PF00563 EAL domain C2U39_10440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C2U39_10445 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C2U39_10455 PF04542 Sigma-70 region 2 C2U39_10455 PF08281 Sigma-70, region 4 C2U39_10480 PF01882 Protein of unknown function DUF58 C2U39_10485 PF07726 ATPase family associated with various cellular activities (AAA) C2U39_10485 PF17863 AAA lid domain C2U39_10490 PF00108 Thiolase, N-terminal domain C2U39_10490 PF02803 Thiolase, C-terminal domain C2U39_10495 PF00378 Enoyl-CoA hydratase/isomerase C2U39_10495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C2U39_10495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C2U39_10505 PF07152 YaeQ protein C2U39_10515 PF07690 Major Facilitator Superfamily C2U39_10520 PF00005 ABC transporter C2U39_10525 PF01032 FecCD transport family C2U39_10540 PF05433 Glycine zipper 2TM domain C2U39_10545 PF13193 AMP-binding enzyme C-terminal domain C2U39_10545 PF00501 AMP-binding enzyme C2U39_10550 PF08279 HTH domain C2U39_10550 PF13280 WYL domain C2U39_10560 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C2U39_10560 PF01502 Phosphoribosyl-AMP cyclohydrolase C2U39_10565 PF00977 Histidine biosynthesis protein C2U39_10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_10570 PF01627 Hpt domain C2U39_10570 PF00512 His Kinase A (phospho-acceptor) domain C2U39_10570 PF00072 Response regulator receiver domain C2U39_10580 PF00072 Response regulator receiver domain C2U39_10585 PF00977 Histidine biosynthesis protein C2U39_10590 PF00117 Glutamine amidotransferase class-I C2U39_10595 PF08645 Polynucleotide kinase 3 phosphatase C2U39_10595 PF00475 Imidazoleglycerol-phosphate dehydratase C2U39_10600 PF00155 Aminotransferase class I and II C2U39_10605 PF00815 Histidinol dehydrogenase C2U39_10610 PF08029 HisG, C-terminal domain C2U39_10610 PF01634 ATP phosphoribosyltransferase C2U39_10620 PF13307 Helicase C-terminal domain C2U39_10620 PF04851 Type III restriction enzyme, res subunit C2U39_10625 PF00814 Glycoprotease family C2U39_10635 PF00561 alpha/beta hydrolase fold C2U39_10640 PF00501 AMP-binding enzyme C2U39_10640 PF13193 AMP-binding enzyme C-terminal domain C2U39_10645 PF01612 3'-5' exonuclease C2U39_10645 PF00570 HRDC domain C2U39_10655 PF00892 EamA-like transporter family C2U39_10665 PF01207 Dihydrouridine synthase (Dus) C2U39_10670 PF04304 Protein of unknown function (DUF454) C2U39_10675 PF00156 Phosphoribosyl transferase domain C2U39_10680 PF12169 DNA polymerase III subunits gamma and tau domain III C2U39_10680 PF12170 DNA polymerase III tau subunit V interacting with alpha C2U39_10680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C2U39_10685 PF02575 YbaB/EbfC DNA-binding family C2U39_10695 PF01609 Transposase DDE domain C2U39_10695 PF05598 Transposase domain (DUF772) C2U39_10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_10720 PF03466 LysR substrate binding domain C2U39_10725 PF02678 Pirin C2U39_10725 PF05726 Pirin C-terminal cupin domain C2U39_10740 PF00072 Response regulator receiver domain C2U39_10740 PF00196 Bacterial regulatory proteins, luxR family C2U39_10750 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C2U39_10750 PF00271 Helicase conserved C-terminal domain C2U39_10750 PF04408 Helicase associated domain (HA2) C2U39_10750 PF11898 Domain of unknown function (DUF3418) C2U39_10750 PF00270 DEAD/DEAH box helicase C2U39_10760 PF01386 Ribosomal L25p family C2U39_10765 PF00672 HAMP domain C2U39_10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_10765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U39_10765 PF00512 His Kinase A (phospho-acceptor) domain C2U39_10765 PF01627 Hpt domain C2U39_10765 PF00072 Response regulator receiver domain C2U39_10770 PF00072 Response regulator receiver domain C2U39_10775 PF00753 Metallo-beta-lactamase superfamily C2U39_10785 PF00586 AIR synthase related protein, N-terminal domain C2U39_10785 PF02769 AIR synthase related protein, C-terminal domain C2U39_10800 PF10672 S-adenosylmethionine-dependent methyltransferase C2U39_10800 PF17785 PUA-like domain C2U39_10805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_10805 PF00672 HAMP domain C2U39_10805 PF12729 Four helix bundle sensory module for signal transduction C2U39_10810 PF00708 Acylphosphatase C2U39_10820 PF08264 Anticodon-binding domain of tRNA C2U39_10820 PF09334 tRNA synthetases class I (M) C2U39_10820 PF01588 Putative tRNA binding domain C2U39_10825 PF10609 NUBPL iron-transfer P-loop NTPase C2U39_10830 PF00485 Phosphoribulokinase / Uridine kinase family C2U39_10835 PF00692 dUTPase C2U39_10840 PF01384 Phosphate transporter family C2U39_10845 PF13700 Domain of unknown function (DUF4158) C2U39_10845 PF01526 Tn3 transposase DDE domain C2U39_10850 PF00239 Resolvase, N terminal domain C2U39_10850 PF02796 Helix-turn-helix domain of resolvase C2U39_10855 PF02796 Helix-turn-helix domain of resolvase C2U39_10855 PF00239 Resolvase, N terminal domain C2U39_10860 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ C2U39_10870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_10870 PF00672 HAMP domain C2U39_10880 PF12111 Polyribonucleotide phosphorylase C terminal C2U39_10880 PF10150 Ribonuclease E/G family C2U39_10880 PF00575 S1 RNA binding domain C2U39_10885 PF01479 S4 domain C2U39_10885 PF00849 RNA pseudouridylate synthase C2U39_10890 PF02545 Maf-like protein C2U39_10900 PF02620 Large ribosomal RNA subunit accumulation protein YceD C2U39_10905 PF01783 Ribosomal L32p protein family C2U39_10910 PF02504 Fatty acid synthesis protein C2U39_10915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2U39_10915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2U39_10920 PF00698 Acyl transferase domain C2U39_10930 PF00550 Phosphopantetheine attachment site C2U39_10935 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U39_10935 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U39_10940 PF01063 Amino-transferase class IV C2U39_10945 PF02618 YceG-like family C2U39_10950 PF02223 Thymidylate kinase C2U39_10955 PF09115 DNA polymerase III, delta subunit, C terminal C2U39_10960 PF01026 TatD related DNase C2U39_10965 PF00589 Phage integrase family C2U39_10975 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C2U39_10975 PF01189 16S rRNA methyltransferase RsmB/F C2U39_10975 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C2U39_10980 PF02470 MlaD protein C2U39_10985 PF04403 Paraquat-inducible protein A C2U39_10995 PF07130 YebG protein C2U39_11010 PF13654 AAA domain C2U39_11010 PF05362 Lon protease (S16) C-terminal proteolytic domain C2U39_11015 PF07977 FabA-like domain C2U39_11020 PF04957 Ribosome modulation factor C2U39_11040 PF02926 THUMP domain C2U39_11040 PF10672 S-adenosylmethionine-dependent methyltransferase C2U39_11040 PF01170 Putative RNA methylase family UPF0020 C2U39_11045 PF07126 Cell-division protein ZapC C2U39_11050 PF01180 Dihydroorotate dehydrogenase C2U39_11055 PF05088 Bacterial NAD-glutamate dehydrogenase C2U39_11065 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C2U39_11065 PF01433 Peptidase family M1 domain C2U39_11065 PF11940 Domain of unknown function (DUF3458) Ig-like fold C2U39_11070 PF17804 Tail specific protease N-terminal domain C2U39_11070 PF03572 Peptidase family S41 C2U39_11070 PF00595 PDZ domain C2U39_11070 PF11818 C-terminal domain of tail specific protease (DUF3340) C2U39_11075 PF04352 ProQ/FINO family C2U39_11075 PF17516 ProQ C-terminal domain C2U39_11080 PF13185 GAF domain C2U39_11090 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2U39_11105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2U39_11105 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C2U39_11115 PF00403 Heavy-metal-associated domain C2U39_11130 PF00027 Cyclic nucleotide-binding domain C2U39_11130 PF13545 Crp-like helix-turn-helix domain C2U39_11135 PF00582 Universal stress protein family C2U39_11140 PF01171 PP-loop family C2U39_11155 PF02798 Glutathione S-transferase, N-terminal domain C2U39_11155 PF00043 Glutathione S-transferase, C-terminal domain C2U39_11160 PF05025 RbsD / FucU transport protein family C2U39_11165 PF00005 ABC transporter C2U39_11170 PF02653 Branched-chain amino acid transport system / permease component C2U39_11175 PF13407 Periplasmic binding protein domain C2U39_11180 PF00294 pfkB family carbohydrate kinase C2U39_11185 PF00356 Bacterial regulatory proteins, lacI family C2U39_11190 PF00990 Diguanylate cyclase, GGDEF domain C2U39_11190 PF03707 Bacterial signalling protein N terminal repeat C2U39_11190 PF00563 EAL domain C2U39_11200 PF02146 Sir2 family C2U39_11215 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U39_11215 PF00512 His Kinase A (phospho-acceptor) domain C2U39_11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_11215 PF00072 Response regulator receiver domain C2U39_11220 PF00216 Bacterial DNA-binding protein C2U39_11225 PF03147 Ferredoxin-fold anticodon binding domain C2U39_11225 PF01588 Putative tRNA binding domain C2U39_11225 PF03484 tRNA synthetase B5 domain C2U39_11225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C2U39_11225 PF03483 B3/4 domain C2U39_11230 PF01409 tRNA synthetases class II core domain (F) C2U39_11230 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C2U39_11235 PF00589 Phage integrase family C2U39_11235 PF02899 Phage integrase, N-terminal SAM-like domain C2U39_11240 PF13358 DDE superfamily endonuclease C2U39_11240 PF13592 Winged helix-turn helix C2U39_11250 PF01609 Transposase DDE domain C2U39_11280 PF06892 Phage regulatory protein CII (CP76) C2U39_11440 PF02413 Caudovirales tail fibre assembly protein, lambda gpK C2U39_11470 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system C2U39_11475 PF00453 Ribosomal protein L20 C2U39_11480 PF01632 Ribosomal protein L35 C2U39_11485 PF00707 Translation initiation factor IF-3, C-terminal domain C2U39_11485 PF05198 Translation initiation factor IF-3, N-terminal domain C2U39_11490 PF03129 Anticodon binding domain C2U39_11490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2U39_11490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U39_11490 PF02824 TGS domain C2U39_11505 PF04055 Radical SAM superfamily C2U39_11510 PF03989 DNA gyrase C-terminal domain, beta-propeller C2U39_11510 PF00521 DNA gyrase/topoisomerase IV, subunit A C2U39_11520 PF13419 Haloacid dehalogenase-like hydrolase C2U39_11525 PF03477 ATP cone domain C2U39_11525 PF00317 Ribonucleotide reductase, all-alpha domain C2U39_11525 PF02867 Ribonucleotide reductase, barrel domain C2U39_11530 PF00268 Ribonucleotide reductase, small chain C2U39_11535 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U39_11540 PF06725 3D domain C2U39_11540 PF03562 MltA specific insert domain C2U39_11545 PF06945 Protein of unknown function (DUF1289) C2U39_11550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U39_11550 PF02378 Phosphotransferase system, EIIC C2U39_11555 PF00294 pfkB family carbohydrate kinase C2U39_11560 PF00381 PTS HPr component phosphorylation site C2U39_11560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U39_11565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U39_11565 PF00356 Bacterial regulatory proteins, lacI family C2U39_11570 PF03222 Tryptophan/tyrosine permease family C2U39_11585 PF00271 Helicase conserved C-terminal domain C2U39_11585 PF00270 DEAD/DEAH box helicase C2U39_11595 PF01264 Chorismate synthase C2U39_11600 PF05175 Methyltransferase small domain C2U39_11605 PF01713 Smr domain C2U39_11630 PF00704 Glycosyl hydrolases family 18 C2U39_11630 PF08329 Chitinase A, N-terminal domain C2U39_11640 PF03831 PhnA domain C2U39_11640 PF08274 PhnA Zinc-Ribbon C2U39_11650 PF01810 LysE type translocator C2U39_11675 PF01791 DeoC/LacD family aldolase C2U39_11680 PF07670 Nucleoside recognition C2U39_11680 PF01773 Na+ dependent nucleoside transporter N-terminus C2U39_11680 PF07662 Na+ dependent nucleoside transporter C-terminus C2U39_11685 PF01048 Phosphorylase superfamily C2U39_11690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_11690 PF03466 LysR substrate binding domain C2U39_11710 PF03330 Lytic transglycolase C2U39_11725 PF04310 MukB N-terminal C2U39_11725 PF16330 MukB hinge domain C2U39_11730 PF04288 MukE-like family C2U39_11735 PF03882 MukF winged-helix domain C2U39_11735 PF17193 MukF C-terminal domain C2U39_11735 PF17192 MukF middle domain C2U39_11745 PF02698 DUF218 domain C2U39_11750 PF00121 Triosephosphate isomerase C2U39_11755 PF00365 Phosphofructokinase C2U39_11765 PF01546 Peptidase family M20/M25/M40 C2U39_11765 PF07687 Peptidase dimerisation domain C2U39_11770 PF13419 Haloacid dehalogenase-like hydrolase C2U39_11775 PF00883 Cytosol aminopeptidase family, catalytic domain C2U39_11775 PF02789 Cytosol aminopeptidase family, N-terminal domain C2U39_11815 PF11398 Protein of unknown function (DUF2813) C2U39_11830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_11830 PF03466 LysR substrate binding domain C2U39_11835 PF01925 Sulfite exporter TauE/SafE C2U39_11845 PF07478 D-ala D-ala ligase C-terminus C2U39_11845 PF01820 D-ala D-ala ligase N-terminus C2U39_11855 PF00255 Glutathione peroxidase C2U39_11860 PF00270 DEAD/DEAH box helicase C2U39_11860 PF00271 Helicase conserved C-terminal domain C2U39_11865 PF13673 Acetyltransferase (GNAT) domain C2U39_11875 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C2U39_11895 PF13673 Acetyltransferase (GNAT) domain C2U39_11900 PF03992 Antibiotic biosynthesis monooxygenase C2U39_11905 PF08543 Phosphomethylpyrimidine kinase C2U39_11925 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C2U39_11925 PF00561 alpha/beta hydrolase fold C2U39_11930 PF01575 MaoC like domain C2U39_11950 PF00664 ABC transporter transmembrane region C2U39_11950 PF00005 ABC transporter C2U39_11955 PF00664 ABC transporter transmembrane region C2U39_11955 PF00005 ABC transporter C2U39_11960 PF00512 His Kinase A (phospho-acceptor) domain C2U39_11960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U39_11960 PF00672 HAMP domain C2U39_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_11960 PF00072 Response regulator receiver domain C2U39_11960 PF01627 Hpt domain C2U39_11965 PF00085 Thioredoxin C2U39_11970 PF00939 Sodium:sulfate symporter transmembrane region C2U39_11980 PF00343 Carbohydrate phosphorylase C2U39_12000 PF00425 chorismate binding enzyme C2U39_12000 PF04715 Anthranilate synthase component I, N terminal region C2U39_12005 PF00293 NUDIX domain C2U39_12010 PF03222 Tryptophan/tyrosine permease family C2U39_12015 PF00375 Sodium:dicarboxylate symporter family C2U39_12020 PF16124 RecQ zinc-binding C2U39_12020 PF00570 HRDC domain C2U39_12020 PF00271 Helicase conserved C-terminal domain C2U39_12020 PF00270 DEAD/DEAH box helicase C2U39_12020 PF09382 RQC domain C2U39_12025 PF08298 PrkA AAA domain C2U39_12025 PF06798 PrkA serine protein kinase C-terminal domain C2U39_12030 PF04285 Protein of unknown function (DUF444) C2U39_12035 PF04293 SpoVR like protein C2U39_12040 PF00392 Bacterial regulatory proteins, gntR family C2U39_12040 PF07840 FadR C-terminal domain C2U39_12045 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C2U39_12050 PF02600 Disulfide bond formation protein DsbB C2U39_12055 PF09335 SNARE associated Golgi protein C2U39_12065 PF04851 Type III restriction enzyme, res subunit C2U39_12065 PF02151 UvrB/uvrC motif C2U39_12065 PF12344 Ultra-violet resistance protein B C2U39_12065 PF17757 UvrB interaction domain C2U39_12065 PF00271 Helicase conserved C-terminal domain C2U39_12080 PF06826 Predicted Permease Membrane Region C2U39_12080 PF02080 TrkA-C domain C2U39_12085 PF01464 Transglycosylase SLT domain C2U39_12085 PF10145 Phage-related minor tail protein C2U39_12085 PF01551 Peptidase family M23 C2U39_12090 PF03401 Tripartite tricarboxylate transporter family receptor C2U39_12100 PF01970 Tripartite tricarboxylate transporter TctA family C2U39_12105 PF00072 Response regulator receiver domain C2U39_12110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_12110 PF17203 Single cache domain 3 C2U39_12110 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C2U39_12110 PF00989 PAS fold C2U39_12115 PF01047 MarR family C2U39_12115 PF00480 ROK family C2U39_12120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_12120 PF00672 HAMP domain C2U39_12120 PF17200 Single Cache domain 2 C2U39_12125 PF02810 SEC-C motif C2U39_12130 PF01266 FAD dependent oxidoreductase C2U39_12130 PF04324 BFD-like [2Fe-2S] binding domain C2U39_12135 PF00890 FAD binding domain C2U39_12140 PF13183 4Fe-4S dicluster domain C2U39_12140 PF02754 Cysteine-rich domain C2U39_12155 PF02335 Cytochrome c552 C2U39_12160 PF13435 Cytochrome c554 and c-prime C2U39_12160 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C2U39_12165 PF13247 4Fe-4S dicluster domain C2U39_12165 PF00037 4Fe-4S binding domain C2U39_12170 PF03916 Polysulphide reductase, NrfD C2U39_12175 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C2U39_12175 PF01578 Cytochrome C assembly protein C2U39_12180 PF08534 Redoxin C2U39_12185 PF03918 Cytochrome C biogenesis protein C2U39_12190 PF00768 D-alanyl-D-alanine carboxypeptidase C2U39_12200 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C2U39_12205 PF01266 FAD dependent oxidoreductase C2U39_12210 PF00478 IMP dehydrogenase / GMP reductase domain C2U39_12210 PF00571 CBS domain C2U39_12220 PF01717 Cobalamin-independent synthase, Catalytic domain C2U39_12220 PF08267 Cobalamin-independent synthase, N-terminal domain C2U39_12225 PF03466 LysR substrate binding domain C2U39_12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_12235 PF00593 TonB dependent receptor C2U39_12235 PF07715 TonB-dependent Receptor Plug Domain C2U39_12240 PF17158 Membrane-associated sensor, integral membrane domain C2U39_12240 PF00990 Diguanylate cyclase, GGDEF domain C2U39_12245 PF12792 CSS motif domain associated with EAL C2U39_12245 PF00563 EAL domain C2U39_12250 PF12833 Helix-turn-helix domain C2U39_12250 PF02311 AraC-like ligand binding domain C2U39_12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_12255 PF03466 LysR substrate binding domain C2U39_12260 PF13460 NAD(P)H-binding C2U39_12270 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U39_12275 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C2U39_12275 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C2U39_12295 PF00141 Peroxidase C2U39_12300 PF08220 DeoR-like helix-turn-helix domain C2U39_12300 PF00455 DeoR C terminal sensor domain C2U39_12325 PF10722 Putative bacterial sensory transduction regulator C2U39_12335 PF00265 Thymidine kinase C2U39_12340 PF03553 Na+/H+ antiporter family C2U39_12345 PF00816 H-NS histone family C2U39_12350 PF01923 Cobalamin adenosyltransferase C2U39_12355 PF12843 Putative quorum-sensing-regulated virulence factor C2U39_12360 PF04055 Radical SAM superfamily C2U39_12365 PF06508 Queuosine biosynthesis protein QueC C2U39_12380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C2U39_12385 PF18073 Rubredoxin metal binding domain C2U39_12395 PF00216 Bacterial DNA-binding protein C2U39_12400 PF00575 S1 RNA binding domain C2U39_12405 PF02224 Cytidylate kinase C2U39_12410 PF00925 GTP cyclohydrolase II C2U39_12415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_12415 PF03466 LysR substrate binding domain C2U39_12420 PF07690 Major Facilitator Superfamily C2U39_12435 PF00881 Nitroreductase family C2U39_12440 PF03806 AbgT putative transporter family C2U39_12445 PF03707 Bacterial signalling protein N terminal repeat C2U39_12445 PF00563 EAL domain C2U39_12445 PF13188 PAS domain C2U39_12445 PF00990 Diguanylate cyclase, GGDEF domain C2U39_12455 PF03466 LysR substrate binding domain C2U39_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_12460 PF00486 Transcriptional regulatory protein, C terminal C2U39_12460 PF00072 Response regulator receiver domain C2U39_12470 PF01212 Beta-eliminating lyase C2U39_12485 PF00248 Aldo/keto reductase family C2U39_12490 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C2U39_12500 PF03411 Penicillin-insensitive murein endopeptidase C2U39_12510 PF04536 TPM domain C2U39_12525 PF01618 MotA/TolQ/ExbB proton channel family C2U39_12530 PF00691 OmpA family C2U39_12530 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U39_12535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C2U39_12540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2U39_12555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C2U39_12555 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2U39_12560 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2U39_12560 PF00384 Molybdopterin oxidoreductase C2U39_12560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U39_12565 PF00146 NADH dehydrogenase C2U39_12570 PF12838 4Fe-4S dicluster domain C2U39_12575 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C2U39_12580 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C2U39_12585 PF00361 Proton-conducting membrane transporter C2U39_12585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C2U39_12590 PF00361 Proton-conducting membrane transporter C2U39_12595 PF00361 Proton-conducting membrane transporter C2U39_12600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C2U39_12600 PF02769 AIR synthase related protein, C-terminal domain C2U39_12600 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C2U39_12605 PF01464 Transglycosylase SLT domain C2U39_12605 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_12610 PF07191 zinc-ribbons C2U39_12615 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C2U39_12615 PF01926 50S ribosome-binding GTPase C2U39_12620 PF13360 PQQ-like domain C2U39_12625 PF09976 Tetratricopeptide repeat-like domain C2U39_12630 PF03129 Anticodon binding domain C2U39_12630 PF13393 Histidyl-tRNA synthetase C2U39_12635 PF04551 GcpE protein C2U39_12640 PF13464 Domain of unknown function (DUF4115) C2U39_12650 PF04055 Radical SAM superfamily C2U39_12655 PF00334 Nucleoside diphosphate kinase C2U39_12660 PF12404 Peptidase C2U39_12660 PF00883 Cytosol aminopeptidase family, catalytic domain C2U39_12665 PF00883 Cytosol aminopeptidase family, catalytic domain C2U39_12665 PF12404 Peptidase C2U39_12670 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U39_12675 PF00012 Hsp70 protein C2U39_12680 PF00226 DnaJ domain C2U39_12680 PF07743 HSCB C-terminal oligomerisation domain C2U39_12685 PF01521 Iron-sulphur cluster biosynthesis C2U39_12690 PF01592 NifU-like N terminal domain C2U39_12695 PF00266 Aminotransferase class-V C2U39_12700 PF02082 Transcriptional regulator C2U39_12705 PF00588 SpoU rRNA Methylase family C2U39_12725 PF07719 Tetratricopeptide repeat C2U39_12725 PF13181 Tetratricopeptide repeat C2U39_12730 PF00581 Rhodanese-like domain C2U39_12735 PF02355 Protein export membrane protein C2U39_12735 PF07549 SecD/SecF GG Motif C2U39_12740 PF02355 Protein export membrane protein C2U39_12740 PF13721 SecD export protein N-terminal TM region C2U39_12740 PF07549 SecD/SecF GG Motif C2U39_12745 PF02699 Preprotein translocase subunit C2U39_12750 PF01702 Queuine tRNA-ribosyltransferase C2U39_12755 PF02547 Queuosine biosynthesis protein C2U39_12760 PF00571 CBS domain C2U39_12765 PF00578 AhpC/TSA family C2U39_12765 PF10417 C-terminal domain of 1-Cys peroxiredoxin C2U39_12770 PF13192 Thioredoxin domain C2U39_12770 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_12775 PF07690 Major Facilitator Superfamily C2U39_12800 PF02347 Glycine cleavage system P-protein C2U39_12805 PF01597 Glycine cleavage H-protein C2U39_12810 PF08669 Glycine cleavage T-protein C-terminal barrel domain C2U39_12810 PF01571 Aminomethyltransferase folate-binding domain C2U39_12815 PF01494 FAD binding domain C2U39_12820 PF01494 FAD binding domain C2U39_12825 PF03695 Uncharacterised protein family (UPF0149) C2U39_12830 PF05164 Cell division protein ZapA C2U39_12840 PF07690 Major Facilitator Superfamily C2U39_12845 PF00005 ABC transporter C2U39_12845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U39_12850 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U39_12850 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_12855 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_12865 PF00043 Glutathione S-transferase, C-terminal domain C2U39_12865 PF02798 Glutathione S-transferase, N-terminal domain C2U39_12870 PF00043 Glutathione S-transferase, C-terminal domain C2U39_12870 PF02798 Glutathione S-transferase, N-terminal domain C2U39_12880 PF00459 Inositol monophosphatase family C2U39_12885 PF00691 OmpA family C2U39_12885 PF18393 MotY N-terminal domain C2U39_12890 PF12729 Four helix bundle sensory module for signal transduction C2U39_12890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_12890 PF00672 HAMP domain C2U39_12895 PF00929 Exonuclease C2U39_12900 PF03553 Na+/H+ antiporter family C2U39_12900 PF13726 Na+-H+ antiporter family C2U39_12905 PF07690 Major Facilitator Superfamily C2U39_12910 PF03466 LysR substrate binding domain C2U39_12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_12915 PF00990 Diguanylate cyclase, GGDEF domain C2U39_12915 PF00563 EAL domain C2U39_12915 PF08447 PAS fold C2U39_12915 PF08448 PAS fold C2U39_12925 PF00270 DEAD/DEAH box helicase C2U39_12925 PF03880 DbpA RNA binding domain C2U39_12925 PF00271 Helicase conserved C-terminal domain C2U39_12930 PF03061 Thioesterase superfamily C2U39_12940 PF02913 FAD linked oxidases, C-terminal domain C2U39_12940 PF01565 FAD binding domain C2U39_12940 PF13183 4Fe-4S dicluster domain C2U39_12950 PF03741 Integral membrane protein TerC family C2U39_12950 PF03471 Transporter associated domain C2U39_12955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U39_12960 PF00107 Zinc-binding dehydrogenase C2U39_12960 PF08240 Alcohol dehydrogenase GroES-like domain C2U39_12965 PF00962 Adenosine/AMP deaminase C2U39_12970 PF13344 Haloacid dehalogenase-like hydrolase C2U39_12980 PF00733 Asparagine synthase C2U39_12980 PF13537 Glutamine amidotransferase domain C2U39_12995 PF14497 Glutathione S-transferase, C-terminal domain C2U39_12995 PF02798 Glutathione S-transferase, N-terminal domain C2U39_13005 PF04209 homogentisate 1,2-dioxygenase C2U39_13010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U39_13020 PF00849 RNA pseudouridylate synthase C2U39_13025 PF13426 PAS domain C2U39_13025 PF00990 Diguanylate cyclase, GGDEF domain C2U39_13025 PF00563 EAL domain C2U39_13030 PF00672 HAMP domain C2U39_13030 PF12729 Four helix bundle sensory module for signal transduction C2U39_13030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_13035 PF00501 AMP-binding enzyme C2U39_13035 PF13193 AMP-binding enzyme C-terminal domain C2U39_13060 PF07044 Protein of unknown function (DUF1329) C2U39_13070 PF01144 Coenzyme A transferase C2U39_13075 PF01144 Coenzyme A transferase C2U39_13080 PF03601 Conserved hypothetical protein 698 C2U39_13090 PF07690 Major Facilitator Superfamily C2U39_13095 PF05853 beta-keto acid cleavage enzyme C2U39_13100 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C2U39_13105 PF00107 Zinc-binding dehydrogenase C2U39_13105 PF08240 Alcohol dehydrogenase GroES-like domain C2U39_13115 PF00285 Citrate synthase, C-terminal domain C2U39_13120 PF00330 Aconitase family (aconitate hydratase) C2U39_13120 PF00694 Aconitase C-terminal domain C2U39_13125 PF04303 PrpF protein C2U39_13140 PF00593 TonB dependent receptor C2U39_13140 PF07715 TonB-dependent Receptor Plug Domain C2U39_13140 PF07660 Secretin and TonB N terminus short domain C2U39_13150 PF01027 Inhibitor of apoptosis-promoting Bax1 C2U39_13155 PF12805 FUSC-like inner membrane protein yccS C2U39_13160 PF04358 DsrC like protein C2U39_13165 PF05036 Sporulation related domain C2U39_13170 PF08245 Mur ligase middle domain C2U39_13170 PF02875 Mur ligase family, glutamate ligase domain C2U39_13175 PF01039 Carboxyl transferase domain C2U39_13175 PF17848 Acetyl-coA carboxylase zinc finger domain C2U39_13180 PF01416 tRNA pseudouridine synthase C2U39_13190 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U39_13190 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U39_13195 PF11890 Domain of unknown function (DUF3410) C2U39_13195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U39_13195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U39_13205 PF03180 NLPA lipoprotein C2U39_13225 PF00005 ABC transporter C2U39_13230 PF00990 Diguanylate cyclase, GGDEF domain C2U39_13245 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C2U39_13245 PF02896 PEP-utilising enzyme, TIM barrel domain C2U39_13245 PF00391 PEP-utilising enzyme, mobile domain C2U39_13250 PF03618 Kinase/pyrophosphorylase C2U39_13260 PF00324 Amino acid permease C2U39_13330 PF03412 Peptidase C39 family C2U39_13330 PF00005 ABC transporter C2U39_13330 PF00664 ABC transporter transmembrane region C2U39_13335 PF16199 Radical_SAM C-terminal domain C2U39_13335 PF04055 Radical SAM superfamily C2U39_13340 PF01645 Conserved region in glutamate synthase C2U39_13340 PF04898 Glutamate synthase central domain C2U39_13340 PF00310 Glutamine amidotransferases class-II C2U39_13340 PF01493 GXGXG motif C2U39_13345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C2U39_13345 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_13365 PF14521 Lysine-specific metallo-endopeptidase C2U39_13375 PF00271 Helicase conserved C-terminal domain C2U39_13375 PF00270 DEAD/DEAH box helicase C2U39_13410 PF07759 Protein of unknown function (DUF1615) C2U39_13415 PF00990 Diguanylate cyclase, GGDEF domain C2U39_13420 PF00682 HMGL-like C2U39_13420 PF08502 LeuA allosteric (dimerisation) domain C2U39_13425 PF02142 MGS-like domain C2U39_13425 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2U39_13425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U39_13430 PF00117 Glutamine amidotransferase class-I C2U39_13430 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C2U39_13435 PF05173 Dihydrodipicolinate reductase, C-terminus C2U39_13435 PF01113 Dihydrodipicolinate reductase, N-terminus C2U39_13445 PF01812 5-formyltetrahydrofolate cyclo-ligase family C2U39_13450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C2U39_13455 PF01842 ACT domain C2U39_13455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U39_13455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U39_13460 PF01219 Prokaryotic diacylglycerol kinase C2U39_13465 PF00793 DAHP synthetase I family C2U39_13470 PF00005 ABC transporter C2U39_13475 PF01032 FecCD transport family C2U39_13490 PF00437 Type II/IV secretion system protein C2U39_13500 PF02421 Ferrous iron transport protein B C2U39_13500 PF07670 Nucleoside recognition C2U39_13500 PF17910 FeoB cytosolic helical domain C2U39_13500 PF07664 Ferrous iron transport protein B C terminus C2U39_13510 PF01253 Translation initiation factor SUI1 C2U39_13515 PF01169 Uncharacterized protein family UPF0016 C2U39_13550 PF00990 Diguanylate cyclase, GGDEF domain C2U39_13550 PF13185 GAF domain C2U39_13580 PF09190 DALR domain C2U39_13580 PF01406 tRNA synthetases class I (C) catalytic domain C2U39_13585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2U39_13595 PF00149 Calcineurin-like phosphoesterase C2U39_13600 PF04226 Transglycosylase associated protein C2U39_13605 PF00440 Bacterial regulatory proteins, tetR family C2U39_13605 PF16925 Tetracyclin repressor-like, C-terminal domain C2U39_13610 PF08240 Alcohol dehydrogenase GroES-like domain C2U39_13610 PF00107 Zinc-binding dehydrogenase C2U39_13615 PF13426 PAS domain C2U39_13615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_13615 PF08447 PAS fold C2U39_13620 PF13784 Fic/DOC family N-terminal C2U39_13620 PF02661 Fic/DOC family C2U39_13640 PF05154 TM2 domain C2U39_13655 PF13592 Winged helix-turn helix C2U39_13655 PF13358 DDE superfamily endonuclease C2U39_13720 PF00589 Phage integrase family C2U39_13725 PF02661 Fic/DOC family C2U39_13725 PF13784 Fic/DOC family N-terminal C2U39_13760 PF13195 Protein of unknown function (DUF4011) C2U39_13760 PF13086 AAA domain C2U39_13760 PF13087 AAA domain C2U39_13770 PF00665 Integrase core domain C2U39_13775 PF01695 IstB-like ATP binding protein C2U39_13795 PF13086 AAA domain C2U39_13795 PF13087 AAA domain C2U39_13795 PF13195 Protein of unknown function (DUF4011) C2U39_13810 PF05154 TM2 domain C2U39_13840 PF02899 Phage integrase, N-terminal SAM-like domain C2U39_13840 PF00589 Phage integrase family C2U39_13900 PF00589 Phage integrase family C2U39_13920 PF01066 CDP-alcohol phosphatidyltransferase C2U39_13925 PF02151 UvrB/uvrC motif C2U39_13925 PF08459 UvrC Helix-hairpin-helix N-terminal C2U39_13925 PF01541 GIY-YIG catalytic domain C2U39_13930 PF00072 Response regulator receiver domain C2U39_13930 PF00196 Bacterial regulatory proteins, luxR family C2U39_13935 PF02348 Cytidylyltransferase C2U39_13940 PF03966 Trm112p-like protein C2U39_13945 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C2U39_13950 PF00005 ABC transporter C2U39_13950 PF00664 ABC transporter transmembrane region C2U39_13955 PF03772 Competence protein C2U39_13955 PF00753 Metallo-beta-lactamase superfamily C2U39_13970 PF05872 Bacterial protein of unknown function (DUF853) C2U39_13975 PF00155 Aminotransferase class I and II C2U39_13985 PF13609 Gram-negative porin C2U39_13990 PF13307 Helicase C-terminal domain C2U39_13990 PF06733 DEAD_2 C2U39_14000 PF00850 Histone deacetylase domain C2U39_14005 PF07690 Major Facilitator Superfamily C2U39_14010 PF01926 50S ribosome-binding GTPase C2U39_14015 PF00245 Alkaline phosphatase C2U39_14020 PF00245 Alkaline phosphatase C2U39_14035 PF14760 Rnk N-terminus C2U39_14035 PF01272 Transcription elongation factor, GreA/GreB, C-term C2U39_14040 PF00990 Diguanylate cyclase, GGDEF domain C2U39_14040 PF08448 PAS fold C2U39_14045 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_14050 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_14055 PF00005 ABC transporter C2U39_14065 PF04116 Fatty acid hydroxylase superfamily C2U39_14070 PF13520 Amino acid permease C2U39_14075 PF02574 Homocysteine S-methyltransferase C2U39_14075 PF00809 Pterin binding enzyme C2U39_14075 PF02965 Vitamin B12 dependent methionine synthase, activation domain C2U39_14075 PF02607 B12 binding domain C2U39_14075 PF02310 B12 binding domain C2U39_14085 PF01595 Cyclin M transmembrane N-terminal domain C2U39_14085 PF00571 CBS domain C2U39_14085 PF03471 Transporter associated domain C2U39_14090 PF01895 PhoU domain C2U39_14100 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_14105 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_14110 PF14437 MafB19-like deaminase C2U39_14125 PF01274 Malate synthase C2U39_14130 PF00463 Isocitrate lyase family C2U39_14135 PF00308 Bacterial dnaA protein C2U39_14150 PF00586 AIR synthase related protein, N-terminal domain C2U39_14150 PF02769 AIR synthase related protein, C-terminal domain C2U39_14155 PF00551 Formyl transferase C2U39_14160 PF01784 NIF3 (NGG1p interacting factor 3) C2U39_14165 PF00158 Sigma-54 interaction domain C2U39_14165 PF02954 Bacterial regulatory protein, Fis family C2U39_14170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_14170 PF00512 His Kinase A (phospho-acceptor) domain C2U39_14170 PF00989 PAS fold C2U39_14175 PF02954 Bacterial regulatory protein, Fis family C2U39_14175 PF00072 Response regulator receiver domain C2U39_14175 PF00158 Sigma-54 interaction domain C2U39_14185 PF01842 ACT domain C2U39_14190 PF17941 Polyphosphate kinase C-terminal domain 1 C2U39_14190 PF13089 Polyphosphate kinase N-terminal domain C2U39_14190 PF13090 Polyphosphate kinase C-terminal domain 2 C2U39_14190 PF02503 Polyphosphate kinase middle domain C2U39_14195 PF02541 Ppx/GppA phosphatase family C2U39_14200 PF00571 CBS domain C2U39_14200 PF01769 Divalent cation transporter C2U39_14200 PF03448 MgtE intracellular N domain C2U39_14210 PF07196 Flagellin hook IN motif C2U39_14210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_14215 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C2U39_14215 PF10135 Rod binding protein C2U39_14220 PF02119 Flagellar P-ring protein C2U39_14225 PF02107 Flagellar L-ring protein C2U39_14230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_14230 PF00460 Flagella basal body rod protein C2U39_14235 PF00460 Flagella basal body rod protein C2U39_14235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_14240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_14240 PF07559 Flagellar basal body protein FlaE C2U39_14240 PF00460 Flagella basal body rod protein C2U39_14250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U39_14250 PF00460 Flagella basal body rod protein C2U39_14255 PF00460 Flagella basal body rod protein C2U39_14260 PF01739 CheR methyltransferase, SAM binding domain C2U39_14260 PF03705 CheR methyltransferase, all-alpha domain C2U39_14265 PF00072 Response regulator receiver domain C2U39_14265 PF01584 CheW-like domain C2U39_14270 PF13144 Chaperone for flagella basal body P-ring formation C2U39_14285 PF12850 Calcineurin-like phosphoesterase superfamily domain C2U39_14290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_14300 PF01479 S4 domain C2U39_14300 PF00849 RNA pseudouridylate synthase C2U39_14305 PF01966 HD domain C2U39_14315 PF00892 EamA-like transporter family C2U39_14320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_14345 PF00313 'Cold-shock' DNA-binding domain C2U39_14350 PF02817 e3 binding domain C2U39_14350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U39_14350 PF00364 Biotin-requiring enzyme C2U39_14355 PF02779 Transketolase, pyrimidine binding domain C2U39_14355 PF02780 Transketolase, C-terminal domain C2U39_14360 PF00676 Dehydrogenase E1 component C2U39_14365 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C2U39_14375 PF05472 DNA replication terminus site-binding protein (Ter protein) C2U39_14380 PF00271 Helicase conserved C-terminal domain C2U39_14380 PF04434 SWIM zinc finger C2U39_14380 PF00176 SNF2 family N-terminal domain C2U39_14385 PF04337 Protein of unknown function, DUF480 C2U39_14395 PF02706 Chain length determinant protein C2U39_14400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2U39_14400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2U39_14400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2U39_14405 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C2U39_14415 PF04321 RmlD substrate binding domain C2U39_14420 PF02397 Bacterial sugar transferase C2U39_14425 PF00535 Glycosyl transferase family 2 C2U39_14435 PF00534 Glycosyl transferases group 1 C2U39_14435 PF13439 Glycosyltransferase Family 4 C2U39_14445 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_14460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2U39_14465 PF00551 Formyl transferase C2U39_14465 PF02911 Formyl transferase, C-terminal domain C2U39_14470 PF00483 Nucleotidyl transferase C2U39_14475 PF16363 GDP-mannose 4,6 dehydratase C2U39_14480 PF00072 Response regulator receiver domain C2U39_14480 PF00486 Transcriptional regulatory protein, C terminal C2U39_14485 PF08918 PhoQ Sensor C2U39_14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_14490 PF02685 Glucokinase C2U39_14495 PF01418 Helix-turn-helix domain, rpiR family C2U39_14495 PF01380 SIS domain C2U39_14500 PF02887 Pyruvate kinase, alpha/beta domain C2U39_14500 PF00224 Pyruvate kinase, barrel domain C2U39_14510 PF00873 AcrB/AcrD/AcrF family C2U39_14515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U39_14515 PF02770 Acyl-CoA dehydrogenase, middle domain C2U39_14515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U39_14515 PF09317 Domain of unknown function (DUF1974) C2U39_14520 PF00440 Bacterial regulatory proteins, tetR family C2U39_14540 PF02321 Outer membrane efflux protein C2U39_14545 PF00873 AcrB/AcrD/AcrF family C2U39_14550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_14550 PF00529 HlyD membrane-fusion protein of T1SS C2U39_14555 PF08361 MAATS-type transcriptional repressor, C-terminal region C2U39_14555 PF00440 Bacterial regulatory proteins, tetR family C2U39_14585 PF00849 RNA pseudouridylate synthase C2U39_14585 PF01479 S4 domain C2U39_14590 PF04079 Segregation and condensation complex subunit ScpB C2U39_14595 PF02616 Segregation and condensation protein ScpA C2U39_14600 PF01300 Telomere recombination C2U39_14605 PF02811 PHP domain C2U39_14610 PF04715 Anthranilate synthase component I, N terminal region C2U39_14610 PF00425 chorismate binding enzyme C2U39_14615 PF02885 Glycosyl transferase family, helical bundle domain C2U39_14615 PF00591 Glycosyl transferase family, a/b domain C2U39_14615 PF00117 Glutamine amidotransferase class-I C2U39_14620 PF02885 Glycosyl transferase family, helical bundle domain C2U39_14620 PF00591 Glycosyl transferase family, a/b domain C2U39_14625 PF00218 Indole-3-glycerol phosphate synthase C2U39_14625 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C2U39_14630 PF00291 Pyridoxal-phosphate dependent enzyme C2U39_14635 PF00290 Tryptophan synthase alpha chain C2U39_14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_14725 PF03466 LysR substrate binding domain C2U39_14735 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C2U39_14740 PF00005 ABC transporter C2U39_14745 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_14750 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C2U39_14755 PF07237 Protein of unknown function (DUF1428) C2U39_14760 PF07690 Major Facilitator Superfamily C2U39_14770 PF01040 UbiA prenyltransferase family C2U39_14775 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C2U39_14780 PF00510 Cytochrome c oxidase subunit III C2U39_14785 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2U39_14790 PF06481 COX Aromatic Rich Motif C2U39_14790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C2U39_14795 PF02627 Carboxymuconolactone decarboxylase family C2U39_14800 PF03466 LysR substrate binding domain C2U39_14800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_14810 PF01156 Inosine-uridine preferring nucleoside hydrolase C2U39_14820 PF01047 MarR family C2U39_14835 PF00127 Copper binding proteins, plastocyanin/azurin family C2U39_14840 PF02424 ApbE family C2U39_14845 PF00011 Hsp20/alpha crystallin family C2U39_14850 PF00072 Response regulator receiver domain C2U39_14860 PF03372 Endonuclease/Exonuclease/phosphatase family C2U39_14870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_14875 PF00873 AcrB/AcrD/AcrF family C2U39_14890 PF10437 Bacterial lipoate protein ligase C-terminus C2U39_14890 PF03099 Biotin/lipoate A/B protein ligase family C2U39_14900 PF00873 AcrB/AcrD/AcrF family C2U39_14915 PF04143 Sulphur transport C2U39_14930 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_14940 PF02308 MgtC family C2U39_14945 PF00356 Bacterial regulatory proteins, lacI family C2U39_14945 PF13407 Periplasmic binding protein domain C2U39_14950 PF00251 Glycosyl hydrolases family 32 N-terminal domain C2U39_14950 PF08244 Glycosyl hydrolases family 32 C terminal C2U39_14955 PF00367 phosphotransferase system, EIIB C2U39_14955 PF02378 Phosphotransferase system, EIIC C2U39_14960 PF00294 pfkB family carbohydrate kinase C2U39_14965 PF02264 LamB porin C2U39_14965 PF11471 Maltoporin periplasmic N-terminal extension C2U39_14970 PF01556 DnaJ C terminal domain C2U39_14970 PF00226 DnaJ domain C2U39_14970 PF00684 DnaJ central domain C2U39_14975 PF00012 Hsp70 protein C2U39_14980 PF01025 GrpE C2U39_14985 PF01513 ATP-NAD kinase C2U39_14990 PF17158 Membrane-associated sensor, integral membrane domain C2U39_14990 PF00990 Diguanylate cyclase, GGDEF domain C2U39_14995 PF02463 RecF/RecN/SMC N terminal domain C2U39_15005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_15010 PF00005 ABC transporter C2U39_15010 PF02687 FtsX-like permease family C2U39_15010 PF12704 MacB-like periplasmic core domain C2U39_15015 PF02321 Outer membrane efflux protein C2U39_15020 PF04954 Siderophore-interacting protein C2U39_15020 PF08021 Siderophore-interacting FAD-binding domain C2U39_15025 PF00793 DAHP synthetase I family C2U39_15030 PF00816 H-NS histone family C2U39_15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_15035 PF03466 LysR substrate binding domain C2U39_15040 PF00291 Pyridoxal-phosphate dependent enzyme C2U39_15050 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U39_15080 PF00583 Acetyltransferase (GNAT) family C2U39_15085 PF00849 RNA pseudouridylate synthase C2U39_15090 PF00293 NUDIX domain C2U39_15100 PF04356 Protein of unknown function (DUF489) C2U39_15105 PF00206 Lyase C2U39_15105 PF08328 Adenylosuccinate lyase C-terminal C2U39_15110 PF08007 Cupin superfamily protein C2U39_15115 PF02887 Pyruvate kinase, alpha/beta domain C2U39_15115 PF00224 Pyruvate kinase, barrel domain C2U39_15120 PF00924 Mechanosensitive ion channel C2U39_15120 PF12795 Mechanosensitive ion channel porin domain C2U39_15120 PF12794 Mechanosensitive ion channel inner membrane domain 1 C2U39_15125 PF01810 LysE type translocator C2U39_15130 PF10282 Lactonase, 7-bladed beta-propeller C2U39_15140 PF00860 Permease family C2U39_15150 PF03949 Malic enzyme, NAD binding domain C2U39_15150 PF00390 Malic enzyme, N-terminal domain C2U39_15155 PF12804 MobA-like NTP transferase domain C2U39_15160 PF03205 Molybdopterin guanine dinucleotide synthesis protein B C2U39_15165 PF04632 Fusaric acid resistance protein family C2U39_15180 PF08447 PAS fold C2U39_15180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_15180 PF13426 PAS domain C2U39_15200 PF05114 Protein of unknown function (DUF692) C2U39_15210 PF02028 BCCT, betaine/carnitine/choline family transporter C2U39_15225 PF05598 Transposase domain (DUF772) C2U39_15225 PF01609 Transposase DDE domain C2U39_15240 PF02463 RecF/RecN/SMC N terminal domain C2U39_15255 PF14821 Threonine synthase N terminus C2U39_15255 PF00291 Pyridoxal-phosphate dependent enzyme C2U39_15260 PF00288 GHMP kinases N terminal domain C2U39_15260 PF08544 GHMP kinases C terminal C2U39_15265 PF13840 ACT domain C2U39_15265 PF01842 ACT domain C2U39_15265 PF00696 Amino acid kinase family C2U39_15265 PF03447 Homoserine dehydrogenase, NAD binding domain C2U39_15265 PF00742 Homoserine dehydrogenase C2U39_15275 PF00588 SpoU rRNA Methylase family C2U39_15280 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C2U39_15295 PF03737 Aldolase/RraA C2U39_15305 PF00072 Response regulator receiver domain C2U39_15305 PF00486 Transcriptional regulatory protein, C terminal C2U39_15330 PF13614 AAA domain C2U39_15370 PF01131 DNA topoisomerase C2U39_15370 PF01751 Toprim domain C2U39_15415 PF06067 Domain of unknown function (DUF932) C2U39_15550 PF04002 RadC-like JAB domain C2U39_15640 PF00176 SNF2 family N-terminal domain C2U39_15640 PF00271 Helicase conserved C-terminal domain C2U39_15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_15680 PF03466 LysR substrate binding domain C2U39_15685 PF01381 Helix-turn-helix C2U39_15695 PF00589 Phage integrase family C2U39_15695 PF14659 Phage integrase, N-terminal SAM-like domain C2U39_15695 PF13356 Arm DNA-binding domain C2U39_15705 PF00005 ABC transporter C2U39_15705 PF00664 ABC transporter transmembrane region C2U39_15710 PF00664 ABC transporter transmembrane region C2U39_15710 PF00005 ABC transporter C2U39_15730 PF18389 TrmO C-terminal domain C2U39_15730 PF01980 tRNA-methyltransferase O C2U39_15735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2U39_15735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2U39_15745 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_15745 PF17862 AAA+ lid domain C2U39_15745 PF06480 FtsH Extracellular C2U39_15745 PF01434 Peptidase family M41 C2U39_15750 PF00291 Pyridoxal-phosphate dependent enzyme C2U39_15755 PF00381 PTS HPr component phosphorylation site C2U39_15760 PF00391 PEP-utilising enzyme, mobile domain C2U39_15760 PF02896 PEP-utilising enzyme, TIM barrel domain C2U39_15760 PF05524 PEP-utilising enzyme, N-terminal C2U39_15765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U39_15770 PF01292 Prokaryotic cytochrome b561 C2U39_15780 PF00149 Calcineurin-like phosphoesterase C2U39_15780 PF12320 Type 5 capsule protein repressor C-terminal domain C2U39_15785 PF00583 Acetyltransferase (GNAT) family C2U39_15790 PF04381 Putative exonuclease, RdgC C2U39_15805 PF02254 TrkA-N domain C2U39_15805 PF00999 Sodium/hydrogen exchanger family C2U39_15810 PF00158 Sigma-54 interaction domain C2U39_15810 PF00072 Response regulator receiver domain C2U39_15810 PF02954 Bacterial regulatory protein, Fis family C2U39_15840 PF01266 FAD dependent oxidoreductase C2U39_15845 PF01381 Helix-turn-helix C2U39_15845 PF07883 Cupin domain C2U39_15850 PF00171 Aldehyde dehydrogenase family C2U39_15855 PF00202 Aminotransferase class-III C2U39_15860 PF00324 Amino acid permease C2U39_15865 PF13520 Amino acid permease C2U39_15875 PF02690 Na+/Pi-cotransporter C2U39_15880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U39_15880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U39_15885 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C2U39_15890 PF00072 Response regulator receiver domain C2U39_15890 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_15890 PF00989 PAS fold C2U39_15890 PF01627 Hpt domain C2U39_15890 PF00512 His Kinase A (phospho-acceptor) domain C2U39_15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_15895 PF10725 Protein of unknown function (DUF2517) C2U39_15915 PF00072 Response regulator receiver domain C2U39_15915 PF09308 LuxQ, periplasmic C2U39_15915 PF00512 His Kinase A (phospho-acceptor) domain C2U39_15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_15925 PF01476 LysM domain C2U39_15925 PF03734 L,D-transpeptidase catalytic domain C2U39_15925 PF17969 L,D-transpeptidase C-terminal domain C2U39_15940 PF05971 RNA methyltransferase C2U39_15945 PF00877 NlpC/P60 family C2U39_15950 PF01648 4'-phosphopantetheinyl transferase superfamily C2U39_15955 PF00085 Thioredoxin C2U39_15965 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C2U39_15970 PF01842 ACT domain C2U39_15970 PF00551 Formyl transferase C2U39_15980 PF13396 Phospholipase_D-nuclease N-terminal C2U39_15980 PF13091 PLD-like domain C2U39_15995 PF01464 Transglycosylase SLT domain C2U39_15995 PF10145 Phage-related minor tail protein C2U39_15995 PF01551 Peptidase family M23 C2U39_16000 PF00230 Major intrinsic protein C2U39_16005 PF02075 Crossover junction endodeoxyribonuclease RuvC C2U39_16010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U39_16050 PF04055 Radical SAM superfamily C2U39_16050 PF08497 Radical SAM N-terminal C2U39_16050 PF11842 Domain of unknown function (DUF3362) C2U39_16055 PF00873 AcrB/AcrD/AcrF family C2U39_16065 PF17158 Membrane-associated sensor, integral membrane domain C2U39_16065 PF00990 Diguanylate cyclase, GGDEF domain C2U39_16070 PF01734 Patatin-like phospholipase C2U39_16075 PF00209 Sodium:neurotransmitter symporter family C2U39_16090 PF01389 OmpA-like transmembrane domain C2U39_16090 PF00691 OmpA family C2U39_16095 PF00691 OmpA family C2U39_16095 PF01389 OmpA-like transmembrane domain C2U39_16100 PF01389 OmpA-like transmembrane domain C2U39_16100 PF00691 OmpA family C2U39_16105 PF00390 Malic enzyme, N-terminal domain C2U39_16105 PF03949 Malic enzyme, NAD binding domain C2U39_16110 PF12833 Helix-turn-helix domain C2U39_16115 PF01554 MatE C2U39_16120 PF10692 Protein of unknown function (DUF2498) C2U39_16125 PF00072 Response regulator receiver domain C2U39_16125 PF00990 Diguanylate cyclase, GGDEF domain C2U39_16130 PF00860 Permease family C2U39_16140 PF01235 Sodium:alanine symporter family C2U39_16145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U39_16145 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2U39_16150 PF01699 Sodium/calcium exchanger protein C2U39_16155 PF08534 Redoxin C2U39_16160 PF00293 NUDIX domain C2U39_16170 PF00005 ABC transporter C2U39_16175 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_16180 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_16185 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_16200 PF00005 ABC transporter C2U39_16205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U39_16205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U39_16215 PF03932 CutC family C2U39_16220 PF00480 ROK family C2U39_16230 PF01435 Peptidase family M48 C2U39_16235 PF12849 PBP superfamily domain C2U39_16240 PF00512 His Kinase A (phospho-acceptor) domain C2U39_16240 PF00989 PAS fold C2U39_16240 PF11808 Phosphate regulon sensor protein PhoR C2U39_16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_16245 PF00072 Response regulator receiver domain C2U39_16245 PF00486 Transcriptional regulatory protein, C terminal C2U39_16250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U39_16255 PF00990 Diguanylate cyclase, GGDEF domain C2U39_16255 PF07694 5TMR of 5TMR-LYT C2U39_16260 PF02954 Bacterial regulatory protein, Fis family C2U39_16260 PF00158 Sigma-54 interaction domain C2U39_16260 PF01590 GAF domain C2U39_16265 PF00171 Aldehyde dehydrogenase family C2U39_16275 PF00892 EamA-like transporter family C2U39_16280 PF00248 Aldo/keto reductase family C2U39_16290 PF00072 Response regulator receiver domain C2U39_16290 PF12431 Transcriptional regulator C2U39_16295 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C2U39_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_16295 PF00989 PAS fold C2U39_16295 PF17203 Single cache domain 3 C2U39_16300 PF01047 MarR family C2U39_16305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_16305 PF00529 HlyD membrane-fusion protein of T1SS C2U39_16325 PF01679 Proteolipid membrane potential modulator C2U39_16335 PF13597 Anaerobic ribonucleoside-triphosphate reductase C2U39_16335 PF03477 ATP cone domain C2U39_16345 PF00533 BRCA1 C Terminus (BRCT) domain C2U39_16345 PF12826 Helix-hairpin-helix motif C2U39_16345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C2U39_16345 PF03120 NAD-dependent DNA ligase OB-fold domain C2U39_16345 PF01653 NAD-dependent DNA ligase adenylation domain C2U39_16350 PF04354 ZipA, C-terminal FtsZ-binding domain C2U39_16365 PF03458 UPF0126 domain C2U39_16375 PF05951 Bacterial protein of unknown function (DUF882) C2U39_16380 PF01471 Putative peptidoglycan binding domain C2U39_16380 PF03734 L,D-transpeptidase catalytic domain C2U39_16395 PF00535 Glycosyl transferase family 2 C2U39_16410 PF00128 Alpha amylase, catalytic domain C2U39_16420 PF00196 Bacterial regulatory proteins, luxR family C2U39_16420 PF00072 Response regulator receiver domain C2U39_16450 PF02254 TrkA-N domain C2U39_16450 PF00999 Sodium/hydrogen exchanger family C2U39_16450 PF02080 TrkA-C domain C2U39_16455 PF00990 Diguanylate cyclase, GGDEF domain C2U39_16460 PF01171 PP-loop family C2U39_16460 PF09179 TilS substrate binding domain C2U39_16460 PF11734 TilS substrate C-terminal domain C2U39_16465 PF05649 Peptidase family M13 C2U39_16465 PF01431 Peptidase family M13 C2U39_16485 PF13520 Amino acid permease C2U39_16495 PF03466 LysR substrate binding domain C2U39_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_16505 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C2U39_16510 PF07733 Bacterial DNA polymerase III alpha NTPase domain C2U39_16510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C2U39_16510 PF14579 Helix-hairpin-helix motif C2U39_16510 PF01336 OB-fold nucleic acid binding domain C2U39_16510 PF02811 PHP domain C2U39_16515 PF01351 Ribonuclease HII C2U39_16520 PF02684 Lipid-A-disaccharide synthetase C2U39_16525 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C2U39_16525 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_16530 PF07977 FabA-like domain C2U39_16535 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_16535 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C2U39_16540 PF03938 Outer membrane protein (OmpH-like) C2U39_16545 PF07244 Surface antigen variable number repeat C2U39_16545 PF01103 Surface antigen C2U39_16550 PF17820 PDZ domain C2U39_16550 PF02163 Peptidase family M50 C2U39_16555 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C2U39_16555 PF13288 DXP reductoisomerase C-terminal domain C2U39_16555 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C2U39_16565 PF01255 Putative undecaprenyl diphosphate synthase C2U39_16570 PF01765 Ribosome recycling factor C2U39_16575 PF00696 Amino acid kinase family C2U39_16580 PF00889 Elongation factor TS C2U39_16585 PF00318 Ribosomal protein S2 C2U39_16590 PF00557 Metallopeptidase family M24 C2U39_16595 PF08335 GlnD PII-uridylyltransferase C2U39_16595 PF01966 HD domain C2U39_16595 PF01909 Nucleotidyltransferase domain C2U39_16595 PF01842 ACT domain C2U39_16600 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_16600 PF14602 Hexapeptide repeat of succinyl-transferase C2U39_16600 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C2U39_16605 PF11944 Protein of unknown function (DUF3461) C2U39_16610 PF00367 phosphotransferase system, EIIB C2U39_16610 PF02378 Phosphotransferase system, EIIC C2U39_16620 PF07148 Maltose operon periplasmic protein precursor (MalM) C2U39_16625 PF02264 LamB porin C2U39_16630 PF00258 Flavodoxin C2U39_16635 PF00849 RNA pseudouridylate synthase C2U39_16640 PF04287 tRNA pseudouridine synthase C C2U39_16665 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C2U39_16670 PF07348 Syd protein (SUKH-2) C2U39_16675 PF14489 QueF-like protein C2U39_16675 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C2U39_16685 PF00990 Diguanylate cyclase, GGDEF domain C2U39_16690 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C2U39_16690 PF03641 Possible lysine decarboxylase C2U39_16690 PF11892 Domain of unknown function (DUF3412) C2U39_16695 PF01367 5'-3' exonuclease, C-terminal SAM fold C2U39_16695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2U39_16700 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U39_16700 PF18324 Hypothetical protein TT1725 C2U39_16710 PF01728 FtsJ-like methyltransferase C2U39_16710 PF18125 RlmM ferredoxin-like domain C2U39_16725 PF03466 LysR substrate binding domain C2U39_16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_16730 PF00672 HAMP domain C2U39_16730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_16735 PF11798 IMS family HHH motif C2U39_16735 PF11799 impB/mucB/samB family C-terminal domain C2U39_16735 PF00817 impB/mucB/samB family C2U39_16750 PF02424 ApbE family C2U39_16755 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U39_16755 PF00175 Oxidoreductase NAD-binding domain C2U39_16755 PF00970 Oxidoreductase FAD-binding domain C2U39_16760 PF02508 Rnf-Nqr subunit, membrane protein C2U39_16765 PF02508 Rnf-Nqr subunit, membrane protein C2U39_16770 PF04205 FMN-binding domain C2U39_16775 PF03116 NQR2, RnfD, RnfE family C2U39_16780 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C2U39_16780 PF11973 NQRA C-terminal domain C2U39_16785 PF01722 BolA-like protein C2U39_16790 PF05175 Methyltransferase small domain C2U39_16800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2U39_16810 PF07690 Major Facilitator Superfamily C2U39_16815 PF03502 Nucleoside-specific channel-forming protein, Tsx C2U39_16820 PF04461 Protein of unknown function (DUF520) C2U39_16825 PF02558 Ketopantoate reductase PanE/ApbA C2U39_16825 PF08546 Ketopantoate reductase PanE/ApbA C terminal C2U39_16830 PF01965 DJ-1/PfpI family C2U39_16875 PF04717 Type VI secretion system, phage-baseplate injector C2U39_16880 PF05638 Type VI secretion system effector, Hcp C2U39_16885 PF00196 Bacterial regulatory proteins, luxR family C2U39_16885 PF03472 Autoinducer binding domain C2U39_16890 PF00916 Sulfate permease family C2U39_16890 PF01740 STAS domain C2U39_16895 PF00672 HAMP domain C2U39_16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_16895 PF00512 His Kinase A (phospho-acceptor) domain C2U39_16900 PF00486 Transcriptional regulatory protein, C terminal C2U39_16900 PF00072 Response regulator receiver domain C2U39_16905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_16905 PF00529 HlyD membrane-fusion protein of T1SS C2U39_16910 PF00873 AcrB/AcrD/AcrF family C2U39_16930 PF00356 Bacterial regulatory proteins, lacI family C2U39_16935 PF13416 Bacterial extracellular solute-binding protein C2U39_16940 PF00672 HAMP domain C2U39_16940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_16945 PF00933 Glycosyl hydrolase family 3 N terminal domain C2U39_16955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U39_16960 PF02378 Phosphotransferase system, EIIC C2U39_16960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U39_16965 PF00232 Glycosyl hydrolase family 1 C2U39_16970 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C2U39_16975 PF00722 Glycosyl hydrolases family 16 C2U39_16990 PF16363 GDP-mannose 4,6 dehydratase C2U39_16995 PF00970 Oxidoreductase FAD-binding domain C2U39_16995 PF00175 Oxidoreductase NAD-binding domain C2U39_16995 PF00042 Globin C2U39_17000 PF03063 Prismane/CO dehydrogenase family C2U39_17005 PF00210 Ferritin-like domain C2U39_17045 PF00106 short chain dehydrogenase C2U39_17055 PF03441 FAD binding domain of DNA photolyase C2U39_17055 PF00875 DNA photolyase C2U39_17060 PF13411 MerR HTH family regulatory protein C2U39_17065 PF08349 Protein of unknown function (DUF1722) C2U39_17090 PF01817 Chorismate mutase type II C2U39_17090 PF00800 Prephenate dehydratase C2U39_17120 PF09588 YqaJ-like viral recombinase domain C2U39_17165 PF04002 RadC-like JAB domain C2U39_17175 PF08774 VRR-NUC domain C2U39_17175 PF04851 Type III restriction enzyme, res subunit C2U39_17200 PF13358 DDE superfamily endonuclease C2U39_17200 PF13592 Winged helix-turn helix C2U39_17225 PF11798 IMS family HHH motif C2U39_17225 PF11799 impB/mucB/samB family C-terminal domain C2U39_17225 PF00817 impB/mucB/samB family C2U39_17225 PF13438 Domain of unknown function (DUF4113) C2U39_17260 PF03976 Polyphosphate kinase 2 (PPK2) C2U39_17265 PF07995 Glucose / Sorbosone dehydrogenase C2U39_17275 PF08220 DeoR-like helix-turn-helix domain C2U39_17275 PF00455 DeoR C terminal sensor domain C2U39_17280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C2U39_17280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C2U39_17285 PF07005 Sugar-binding N-terminal domain C2U39_17285 PF17042 Nucleotide-binding C-terminal domain C2U39_17290 PF00596 Class II Aldolase and Adducin N-terminal domain C2U39_17295 PF01261 Xylose isomerase-like TIM barrel C2U39_17300 PF01370 NAD dependent epimerase/dehydratase family C2U39_17305 PF02447 GntP family permease C2U39_17315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_17335 PF00106 short chain dehydrogenase C2U39_17360 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C2U39_17365 PF06029 AlkA N-terminal domain C2U39_17365 PF02805 Metal binding domain of Ada C2U39_17365 PF12833 Helix-turn-helix domain C2U39_17365 PF00730 HhH-GPD superfamily base excision DNA repair protein C2U39_17370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2U39_17370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2U39_17380 PF06906 Protein of unknown function (DUF1272) C2U39_17390 PF12392 Collagenase C2U39_17390 PF01136 Peptidase family U32 C2U39_17395 PF01810 LysE type translocator C2U39_17400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_17400 PF03466 LysR substrate binding domain C2U39_17440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U39_17440 PF01568 Molydopterin dinucleotide binding domain C2U39_17440 PF00384 Molybdopterin oxidoreductase C2U39_17445 PF03916 Polysulphide reductase, NrfD C2U39_17450 PF13247 4Fe-4S dicluster domain C2U39_17455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_17455 PF00512 His Kinase A (phospho-acceptor) domain C2U39_17455 PF00989 PAS fold C2U39_17460 PF00196 Bacterial regulatory proteins, luxR family C2U39_17460 PF00072 Response regulator receiver domain C2U39_17465 PF03575 Peptidase family S51 C2U39_17470 PF07690 Major Facilitator Superfamily C2U39_17475 PF00529 HlyD membrane-fusion protein of T1SS C2U39_17475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_17485 PF00206 Lyase C2U39_17485 PF10415 Fumarase C C-terminus C2U39_17495 PF01619 Proline dehydrogenase C2U39_17495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C2U39_17495 PF00171 Aldehyde dehydrogenase family C2U39_17495 PF14850 DNA-binding domain of Proline dehydrogenase C2U39_17500 PF01168 Alanine racemase, N-terminal domain C2U39_17500 PF00842 Alanine racemase, C-terminal domain C2U39_17505 PF00772 DnaB-like helicase N terminal domain C2U39_17505 PF03796 DnaB-like helicase C terminal domain C2U39_17545 PF00158 Sigma-54 interaction domain C2U39_17545 PF00072 Response regulator receiver domain C2U39_17545 PF02954 Bacterial regulatory protein, Fis family C2U39_17550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U39_17550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U39_17560 PF04102 SlyX C2U39_17565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U39_17570 PF09526 Probable metal-binding protein (DUF2387) C2U39_17580 PF00072 Response regulator receiver domain C2U39_17580 PF01584 CheW-like domain C2U39_17585 PF00561 alpha/beta hydrolase fold C2U39_17590 PF00360 Phytochrome region C2U39_17590 PF00563 EAL domain C2U39_17590 PF01590 GAF domain C2U39_17590 PF00990 Diguanylate cyclase, GGDEF domain C2U39_17595 PF06794 Uncharacterised protein family (UPF0270) C2U39_17600 PF00485 Phosphoribulokinase / Uridine kinase family C2U39_17615 PF02566 OsmC-like protein C2U39_17620 PF00027 Cyclic nucleotide-binding domain C2U39_17620 PF13545 Crp-like helix-turn-helix domain C2U39_17625 PF13847 Methyltransferase domain C2U39_17630 PF08329 Chitinase A, N-terminal domain C2U39_17630 PF00704 Glycosyl hydrolases family 18 C2U39_17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_17635 PF00512 His Kinase A (phospho-acceptor) domain C2U39_17635 PF00989 PAS fold C2U39_17640 PF12832 MFS_1 like family C2U39_17645 PF00593 TonB dependent receptor C2U39_17645 PF07715 TonB-dependent Receptor Plug Domain C2U39_17665 PF01243 Pyridoxamine 5'-phosphate oxidase C2U39_17670 PF06228 Haem utilisation ChuX/HutX C2U39_17680 PF01032 FecCD transport family C2U39_17685 PF00005 ABC transporter C2U39_17695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2U39_17695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2U39_17695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2U39_17700 PF01370 NAD dependent epimerase/dehydratase family C2U39_17705 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C2U39_17715 PF00535 Glycosyl transferase family 2 C2U39_17720 PF01464 Transglycosylase SLT domain C2U39_17725 PF00005 ABC transporter C2U39_17725 PF12848 ABC transporter C2U39_17735 PF00860 Permease family C2U39_17740 PF00226 DnaJ domain C2U39_17740 PF05099 Tellurite resistance protein TerB C2U39_17745 PF00483 Nucleotidyl transferase C2U39_17750 PF01636 Phosphotransferase enzyme family C2U39_17755 PF04453 LPS transport system D C2U39_17755 PF03968 OstA-like protein C2U39_17760 PF00639 PPIC-type PPIASE domain C2U39_17760 PF09312 SurA N-terminal domain C2U39_17765 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C2U39_17770 PF00398 Ribosomal RNA adenine dimethylase C2U39_17775 PF04379 ApaG domain C2U39_17780 PF00149 Calcineurin-like phosphoesterase C2U39_17790 PF00296 Luciferase-like monooxygenase C2U39_17805 PF01926 50S ribosome-binding GTPase C2U39_17805 PF01018 GTP1/OBG C2U39_17810 PF01016 Ribosomal L27 protein C2U39_17815 PF00829 Ribosomal prokaryotic L21 protein C2U39_17820 PF00348 Polyprenyl synthetase C2U39_17825 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C2U39_17830 PF01145 SPFH domain / Band 7 family C2U39_17835 PF12221 Bacterial membrane protein N terminal C2U39_17835 PF01145 SPFH domain / Band 7 family C2U39_17840 PF01926 50S ribosome-binding GTPase C2U39_17840 PF13167 GTP-binding GTPase N-terminal C2U39_17840 PF16360 GTP-binding GTPase Middle Region C2U39_17845 PF17209 Hfq protein C2U39_17855 PF08676 MutL C terminal dimerisation domain C2U39_17855 PF01119 DNA mismatch repair protein, C-terminal domain C2U39_17860 PF01520 N-acetylmuramoyl-L-alanine amidase C2U39_17865 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C2U39_17870 PF01256 Carbohydrate kinase C2U39_17870 PF03853 YjeF-related protein N-terminus C2U39_17875 PF08331 Domain of unknown function (DUF1730) C2U39_17880 PF00480 ROK family C2U39_17890 PF00005 ABC transporter C2U39_17890 PF09383 NIL domain C2U39_17895 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_17900 PF03180 NLPA lipoprotein C2U39_17905 PF02357 Transcription termination factor nusG C2U39_17910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_17915 PF00563 EAL domain C2U39_17915 PF03707 Bacterial signalling protein N terminal repeat C2U39_17915 PF00990 Diguanylate cyclase, GGDEF domain C2U39_17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_17920 PF00512 His Kinase A (phospho-acceptor) domain C2U39_17920 PF00072 Response regulator receiver domain C2U39_17920 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U39_17930 PF01966 HD domain C2U39_17935 PF01627 Hpt domain C2U39_17935 PF18415 Histidine kinase receptor ArcB trans-membrane domain C2U39_17935 PF00512 His Kinase A (phospho-acceptor) domain C2U39_17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_17935 PF00989 PAS fold C2U39_17935 PF00072 Response regulator receiver domain C2U39_17955 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C2U39_17960 PF03466 LysR substrate binding domain C2U39_17960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_17970 PF01259 SAICAR synthetase C2U39_17975 PF06804 NlpB/DapX lipoprotein C2U39_17980 PF00701 Dihydrodipicolinate synthetase family C2U39_17985 PF01842 ACT domain C2U39_17990 PF00578 AhpC/TSA family C2U39_17995 PF03887 YfbU domain C2U39_18000 PF04217 Protein of unknown function, DUF412 C2U39_18005 PF00871 Acetokinase family C2U39_18010 PF01515 Phosphate acetyl/butaryl transferase C2U39_18010 PF07085 DRTGG domain C2U39_18015 PF10369 Small subunit of acetolactate synthase C2U39_18020 PF00205 Thiamine pyrophosphate enzyme, central domain C2U39_18020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U39_18020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U39_18035 PF01569 PAP2 superfamily C2U39_18045 PF08502 LeuA allosteric (dimerisation) domain C2U39_18045 PF00682 HMGL-like C2U39_18050 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U39_18055 PF00330 Aconitase family (aconitate hydratase) C2U39_18060 PF00694 Aconitase C-terminal domain C2U39_18080 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_18085 PF00005 ABC transporter C2U39_18090 PF13638 PIN domain C2U39_18090 PF02562 PhoH-like protein C2U39_18100 PF08343 Ribonucleotide reductase N-terminal C2U39_18100 PF00317 Ribonucleotide reductase, all-alpha domain C2U39_18100 PF02867 Ribonucleotide reductase, barrel domain C2U39_18130 PF03060 Nitronate monooxygenase C2U39_18135 PF00445 Ribonuclease T2 family C2U39_18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_18155 PF00512 His Kinase A (phospho-acceptor) domain C2U39_18155 PF00672 HAMP domain C2U39_18155 PF16527 Two-component sensor protein CpxA, periplasmic domain C2U39_18160 PF00072 Response regulator receiver domain C2U39_18160 PF00486 Transcriptional regulatory protein, C terminal C2U39_18165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_18170 PF12704 MacB-like periplasmic core domain C2U39_18170 PF02687 FtsX-like permease family C2U39_18170 PF00005 ABC transporter C2U39_18180 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C2U39_18200 PF03783 Curli production assembly/transport component CsgG C2U39_18210 PF05643 Putative bacterial lipoprotein (DUF799) C2U39_18215 PF00990 Diguanylate cyclase, GGDEF domain C2U39_18225 PF00271 Helicase conserved C-terminal domain C2U39_18225 PF00270 DEAD/DEAH box helicase C2U39_18230 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U39_18230 PF00175 Oxidoreductase NAD-binding domain C2U39_18230 PF00970 Oxidoreductase FAD-binding domain C2U39_18235 PF02311 AraC-like ligand binding domain C2U39_18235 PF12833 Helix-turn-helix domain C2U39_18255 PF00753 Metallo-beta-lactamase superfamily C2U39_18260 PF01609 Transposase DDE domain C2U39_18285 PF01425 Amidase C2U39_18290 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2U39_18315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U39_18320 PF00583 Acetyltransferase (GNAT) family C2U39_18325 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_18325 PF12804 MobA-like NTP transferase domain C2U39_18330 PF00583 Acetyltransferase (GNAT) family C2U39_18340 PF00009 Elongation factor Tu GTP binding domain C2U39_18340 PF16658 Class II release factor RF3, C-terminal domain C2U39_18340 PF03144 Elongation factor Tu domain 2 C2U39_18345 PF00072 Response regulator receiver domain C2U39_18345 PF00990 Diguanylate cyclase, GGDEF domain C2U39_18350 PF00990 Diguanylate cyclase, GGDEF domain C2U39_18350 PF00563 EAL domain C2U39_18350 PF08448 PAS fold C2U39_18355 PF05762 VWA domain containing CoxE-like protein C2U39_18360 PF17868 AAA lid domain C2U39_18360 PF07728 AAA domain (dynein-related subfamily) C2U39_18360 PF12592 Protein of unknown function (DUF3763) C2U39_18370 PF00583 Acetyltransferase (GNAT) family C2U39_18380 PF00501 AMP-binding enzyme C2U39_18390 PF01177 Asp/Glu/Hydantoin racemase C2U39_18405 PF00155 Aminotransferase class I and II C2U39_18405 PF00392 Bacterial regulatory proteins, gntR family C2U39_18420 PF00209 Sodium:neurotransmitter symporter family C2U39_18425 PF00209 Sodium:neurotransmitter symporter family C2U39_18445 PF07690 Major Facilitator Superfamily C2U39_18455 PF01037 Lrp/AsnC ligand binding domain C2U39_18470 PF01047 MarR family C2U39_18475 PF16884 N-terminal domain of oxidoreductase C2U39_18475 PF00107 Zinc-binding dehydrogenase C2U39_18480 PF00293 NUDIX domain C2U39_18490 PF12833 Helix-turn-helix domain C2U39_18495 PF01641 SelR domain C2U39_18500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U39_18500 PF00128 Alpha amylase, catalytic domain C2U39_18505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U39_18505 PF02806 Alpha amylase, C-terminal all-beta domain C2U39_18505 PF00128 Alpha amylase, catalytic domain C2U39_18510 PF02446 4-alpha-glucanotransferase C2U39_18515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U39_18515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U39_18520 PF01263 Aldose 1-epimerase C2U39_18525 PF02445 Quinolinate synthetase A protein C2U39_18530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_18530 PF00672 HAMP domain C2U39_18605 PF16331 TolA binding protein trimerisation C2U39_18605 PF13174 Tetratricopeptide repeat C2U39_18610 PF00691 OmpA family C2U39_18615 PF07676 WD40-like Beta Propeller Repeat C2U39_18615 PF04052 TolB amino-terminal domain C2U39_18625 PF02472 Biopolymer transport protein ExbD/TolR C2U39_18630 PF01618 MotA/TolQ/ExbB proton channel family C2U39_18635 PF03061 Thioesterase superfamily C2U39_18640 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C2U39_18645 PF08173 Membrane bound YbgT-like protein C2U39_18650 PF02322 Cytochrome bd terminal oxidase subunit II C2U39_18655 PF01654 Cytochrome bd terminal oxidase subunit I C2U39_18665 PF17864 RuvB AAA lid domain C2U39_18665 PF05491 RuvB C-terminal winged helix domain C2U39_18665 PF05496 Holliday junction DNA helicase RuvB P-loop domain C2U39_18670 PF01330 RuvA N terminal domain C2U39_18670 PF07499 RuvA, C-terminal domain C2U39_18675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_18675 PF12729 Four helix bundle sensory module for signal transduction C2U39_18675 PF00672 HAMP domain C2U39_18680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U39_18680 PF04073 Aminoacyl-tRNA editing domain C2U39_18680 PF03129 Anticodon binding domain C2U39_18685 PF00929 Exonuclease C2U39_18690 PF00106 short chain dehydrogenase C2U39_18705 PF00378 Enoyl-CoA hydratase/isomerase C2U39_18710 PF10952 Protein of unknown function (DUF2753) C2U39_18720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U39_18730 PF08447 PAS fold C2U39_18730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_18735 PF00271 Helicase conserved C-terminal domain C2U39_18735 PF00270 DEAD/DEAH box helicase C2U39_18740 PF08534 Redoxin C2U39_18745 PF00403 Heavy-metal-associated domain C2U39_18765 PF02583 Metal-sensitive transcriptional repressor C2U39_18770 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) C2U39_18775 PF01270 Glycosyl hydrolases family 8 C2U39_18780 PF03170 Bacterial cellulose synthase subunit C2U39_18785 PF07238 PilZ domain C2U39_18785 PF00535 Glycosyl transferase family 2 C2U39_18790 PF06564 Cellulose biosynthesis protein BcsQ C2U39_18800 PF11658 Cellulose biosynthesis protein BcsG C2U39_18805 PF00155 Aminotransferase class I and II C2U39_18810 PF03466 LysR substrate binding domain C2U39_18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_18820 PF04055 Radical SAM superfamily C2U39_18825 PF11230 Protein of unknown function (DUF3029) C2U39_18850 PF00672 HAMP domain C2U39_18850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_18850 PF17200 Single Cache domain 2 C2U39_18855 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C2U39_18855 PF18416 N-acetylglucosamine binding protein domain 2 C2U39_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_18860 PF03466 LysR substrate binding domain C2U39_18865 PF00005 ABC transporter C2U39_18865 PF12857 TOBE-like domain C2U39_18870 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_18875 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_18920 PF12137 RNA polymerase recycling family C-terminal C2U39_18920 PF00176 SNF2 family N-terminal domain C2U39_18920 PF00271 Helicase conserved C-terminal domain C2U39_18920 PF18337 RapA N-terminal Tudor like domain C2U39_18920 PF18339 RapA N-terminal Tudor like domain 1 C2U39_18925 PF00849 RNA pseudouridylate synthase C2U39_18935 PF00563 EAL domain C2U39_18935 PF03707 Bacterial signalling protein N terminal repeat C2U39_18935 PF00990 Diguanylate cyclase, GGDEF domain C2U39_18945 PF00118 TCP-1/cpn60 chaperonin family C2U39_18950 PF00166 Chaperonin 10 Kd subunit C2U39_18960 PF04186 FxsA cytoplasmic membrane protein C2U39_18965 PF00206 Lyase C2U39_18965 PF10415 Fumarase C C-terminus C2U39_18970 PF03605 Anaerobic c4-dicarboxylate membrane transporter C2U39_18975 PF04262 Glutamate-cysteine ligase C2U39_18980 PF00675 Insulinase (Peptidase family M16) C2U39_18980 PF05193 Peptidase M16 inactive domain C2U39_18985 PF09335 SNARE associated Golgi protein C2U39_18990 PF00698 Acyl transferase domain C2U39_18990 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U39_18990 PF16197 Ketoacyl-synthetase C-terminal extension C2U39_18990 PF08240 Alcohol dehydrogenase GroES-like domain C2U39_18990 PF08990 Erythronolide synthase docking C2U39_18990 PF08659 KR domain C2U39_18990 PF00550 Phosphopantetheine attachment site C2U39_18990 PF14765 Polyketide synthase dehydratase C2U39_18990 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U39_19000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U39_19020 PF00970 Oxidoreductase FAD-binding domain C2U39_19020 PF00175 Oxidoreductase NAD-binding domain C2U39_19025 PF01281 Ribosomal protein L9, N-terminal domain C2U39_19025 PF03948 Ribosomal protein L9, C-terminal domain C2U39_19030 PF01084 Ribosomal protein S18 C2U39_19035 PF01250 Ribosomal protein S6 C2U39_19040 PF01566 Natural resistance-associated macrophage protein C2U39_19045 PF02272 DHHA1 domain C2U39_19045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2U39_19045 PF01411 tRNA synthetases class II (A) C2U39_19050 PF13673 Acetyltransferase (GNAT) domain C2U39_19060 PF00588 SpoU rRNA Methylase family C2U39_19060 PF08032 RNA 2'-O ribose methyltransferase substrate binding C2U39_19065 PF00575 S1 RNA binding domain C2U39_19065 PF00773 RNB domain C2U39_19065 PF08206 Ribonuclease B OB domain C2U39_19065 PF08461 Ribonuclease R winged-helix domain C2U39_19065 PF17876 Cold shock domain C2U39_19070 PF00990 Diguanylate cyclase, GGDEF domain C2U39_19075 PF02664 S-Ribosylhomocysteinase (LuxS) C2U39_19085 PF00543 Nitrogen regulatory protein P-II C2U39_19090 PF02540 NAD synthase C2U39_19090 PF00795 Carbon-nitrogen hydrolase C2U39_19140 PF14245 Type IV pilin PilA C2U39_19140 PF07963 Prokaryotic N-terminal methylation motif C2U39_19145 PF01609 Transposase DDE domain C2U39_19150 PF02401 LytB protein C2U39_19155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U39_19160 PF01252 Signal peptidase (SPase) II C2U39_19165 PF06827 Zinc finger found in FPG and IleRS C2U39_19165 PF00133 tRNA synthetases class I (I, L, M and V) C2U39_19165 PF08264 Anticodon-binding domain of tRNA C2U39_19170 PF06574 FAD synthetase C2U39_19170 PF01687 Riboflavin kinase C2U39_19175 PF03023 Lipid II flippase MurJ C2U39_19180 PF01649 Ribosomal protein S20 C2U39_19185 PF01022 Bacterial regulatory protein, arsR family C2U39_19190 PF03466 LysR substrate binding domain C2U39_19190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_19200 PF06965 Na+/H+ antiporter 1 C2U39_19205 PF00303 Thymidylate synthase C2U39_19210 PF01790 Prolipoprotein diacylglyceryl transferase C2U39_19215 PF00391 PEP-utilising enzyme, mobile domain C2U39_19215 PF02896 PEP-utilising enzyme, TIM barrel domain C2U39_19215 PF05524 PEP-utilising enzyme, N-terminal C2U39_19215 PF01590 GAF domain C2U39_19220 PF00293 NUDIX domain C2U39_19225 PF02976 DNA mismatch repair enzyme MutH C2U39_19235 PF01245 Ribosomal protein L19 C2U39_19240 PF01746 tRNA (Guanine-1)-methyltransferase C2U39_19245 PF05239 PRC-barrel domain C2U39_19245 PF01782 RimM N-terminal domain C2U39_19250 PF00886 Ribosomal protein S16 C2U39_19255 PF02881 SRP54-type protein, helical bundle domain C2U39_19255 PF00448 SRP54-type protein, GTPase domain C2U39_19255 PF02978 Signal peptide binding domain C2U39_19260 PF01578 Cytochrome C assembly protein C2U39_19265 PF03471 Transporter associated domain C2U39_19265 PF01595 Cyclin M transmembrane N-terminal domain C2U39_19265 PF00571 CBS domain C2U39_19270 PF02082 Transcriptional regulator C2U39_19275 PF00175 Oxidoreductase NAD-binding domain C2U39_19275 PF00970 Oxidoreductase FAD-binding domain C2U39_19275 PF00042 Globin C2U39_19280 PF08238 Sel1 repeat C2U39_19290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C2U39_19290 PF00056 lactate/malate dehydrogenase, NAD binding domain C2U39_19295 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_19300 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_19305 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_19310 PF00005 ABC transporter C2U39_19315 PF02863 Arginine repressor, C-terminal domain C2U39_19315 PF01316 Arginine repressor, DNA binding domain C2U39_19320 PF04261 Dyp-type peroxidase family C2U39_19325 PF00005 ABC transporter C2U39_19325 PF08402 TOBE domain C2U39_19340 PF00543 Nitrogen regulatory protein P-II C2U39_19345 PF00472 RF-1 domain C2U39_19350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2U39_19350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2U39_19355 PF01773 Na+ dependent nucleoside transporter N-terminus C2U39_19355 PF07670 Nucleoside recognition C2U39_19355 PF07662 Na+ dependent nucleoside transporter C-terminus C2U39_19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_19360 PF03466 LysR substrate binding domain C2U39_19365 PF00255 Glutathione peroxidase C2U39_19375 PF02595 Glycerate kinase family C2U39_19380 PF02447 GntP family permease C2U39_19385 PF05651 Putative sugar diacid recognition C2U39_19385 PF17853 GGDEF-like domain C2U39_19385 PF13556 PucR C-terminal helix-turn-helix domain C2U39_19390 PF06062 Uncharacterised protein family (UPF0231) C2U39_19410 PF02594 Uncharacterised ACR, YggU family COG1872 C2U39_19415 PF02325 YGGT family C2U39_19420 PF03807 NADP oxidoreductase coenzyme F420-dependent C2U39_19420 PF14748 Pyrroline-5-carboxylate reductase dimerisation C2U39_19425 PF01168 Alanine racemase, N-terminal domain C2U39_19430 PF00437 Type II/IV secretion system protein C2U39_19440 PF03883 Peroxide stress protein YaaA C2U39_19445 PF00271 Helicase conserved C-terminal domain C2U39_19445 PF00270 DEAD/DEAH box helicase C2U39_19450 PF05175 Methyltransferase small domain C2U39_19455 PF05525 Branched-chain amino acid transport protein C2U39_19470 PF01475 Ferric uptake regulator family C2U39_19475 PF01207 Dihydrouridine synthase (Dus) C2U39_19490 PF00216 Bacterial DNA-binding protein C2U39_19495 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C2U39_19500 PF07238 PilZ domain C2U39_19505 PF18073 Rubredoxin metal binding domain C2U39_19520 PF18429 Domain of unknown function (DUF5609) C2U39_19530 PF13426 PAS domain C2U39_19530 PF08448 PAS fold C2U39_19530 PF00563 EAL domain C2U39_19530 PF00990 Diguanylate cyclase, GGDEF domain C2U39_19530 PF05231 MASE1 C2U39_19530 PF08447 PAS fold C2U39_19535 PF05433 Glycine zipper 2TM domain C2U39_19535 PF16998 17 kDa outer membrane surface antigen C2U39_19540 PF01048 Phosphorylase superfamily C2U39_19545 PF01676 Metalloenzyme superfamily C2U39_19550 PF02885 Glycosyl transferase family, helical bundle domain C2U39_19550 PF00591 Glycosyl transferase family, a/b domain C2U39_19550 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C2U39_19555 PF01791 DeoC/LacD family aldolase C2U39_19565 PF07670 Nucleoside recognition C2U39_19565 PF01773 Na+ dependent nucleoside transporter N-terminus C2U39_19565 PF07662 Na+ dependent nucleoside transporter C-terminus C2U39_19570 PF01026 TatD related DNase C2U39_19575 PF14245 Type IV pilin PilA C2U39_19575 PF07963 Prokaryotic N-terminal methylation motif C2U39_19585 PF01938 TRAM domain C2U39_19585 PF05958 tRNA (Uracil-5-)-methyltransferase C2U39_19590 PF00909 Ammonium Transporter Family C2U39_19610 PF03739 Lipopolysaccharide export system permease LptF/LptG C2U39_19615 PF03739 Lipopolysaccharide export system permease LptF/LptG C2U39_19620 PF00883 Cytosol aminopeptidase family, catalytic domain C2U39_19620 PF02789 Cytosol aminopeptidase family, N-terminal domain C2U39_19625 PF04364 DNA polymerase III chi subunit, HolC C2U39_19630 PF08264 Anticodon-binding domain of tRNA C2U39_19630 PF00133 tRNA synthetases class I (I, L, M and V) C2U39_19630 PF10458 Valyl tRNA synthetase tRNA binding arm C2U39_19635 PF00571 CBS domain C2U39_19635 PF03471 Transporter associated domain C2U39_19635 PF01595 Cyclin M transmembrane N-terminal domain C2U39_19640 PF09335 SNARE associated Golgi protein C2U39_19645 PF00768 D-alanyl-D-alanine carboxypeptidase C2U39_19680 PF02599 Global regulator protein family C2U39_19685 PF01842 ACT domain C2U39_19685 PF00696 Amino acid kinase family C2U39_19685 PF13840 ACT domain C2U39_19690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2U39_19690 PF01411 tRNA synthetases class II (A) C2U39_19690 PF02272 DHHA1 domain C2U39_19695 PF02631 RecX family C2U39_19700 PF00154 recA bacterial DNA recombination protein C2U39_19705 PF02464 Competence-damaged protein C2U39_19715 PF05192 MutS domain III C2U39_19715 PF05188 MutS domain II C2U39_19715 PF01624 MutS domain I C2U39_19715 PF00488 MutS domain V C2U39_19715 PF05190 MutS family domain IV C2U39_19720 PF02028 BCCT, betaine/carnitine/choline family transporter C2U39_19735 PF04222 Protein of unknown function (DUF416) C2U39_19740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U39_19745 PF01551 Peptidase family M23 C2U39_19745 PF01476 LysM domain C2U39_19745 PF08525 Opacity-associated protein A N-terminal motif C2U39_19765 PF01297 Zinc-uptake complex component A periplasmic C2U39_19770 PF00005 ABC transporter C2U39_19775 PF00950 ABC 3 transport family C2U39_19780 PF03466 LysR substrate binding domain C2U39_19780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_19790 PF03167 Uracil DNA glycosylase superfamily C2U39_19795 PF00892 EamA-like transporter family C2U39_19800 PF01541 GIY-YIG catalytic domain C2U39_19815 PF04012 PspA/IM30 family C2U39_19820 PF01553 Acyltransferase C2U39_19840 PF00578 AhpC/TSA family C2U39_19850 PF00684 DnaJ central domain C2U39_19850 PF01556 DnaJ C terminal domain C2U39_19850 PF00226 DnaJ domain C2U39_19885 PF03466 LysR substrate binding domain C2U39_19885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_19910 PF13358 DDE superfamily endonuclease C2U39_19910 PF13592 Winged helix-turn helix C2U39_19920 PF05598 Transposase domain (DUF772) C2U39_19920 PF01609 Transposase DDE domain C2U39_19945 PF13538 UvrD-like helicase C-terminal domain C2U39_19950 PF12705 PD-(D/E)XK nuclease superfamily C2U39_19950 PF00580 UvrD/REP helicase N-terminal domain C2U39_19950 PF13361 UvrD-like helicase C-terminal domain C2U39_19955 PF17946 RecC C-terminal domain C2U39_19960 PF07681 DoxX C2U39_19965 PF02678 Pirin C2U39_19965 PF17954 Quercetinase C-terminal cupin domain C2U39_19975 PF03466 LysR substrate binding domain C2U39_19975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_19985 PF00392 Bacterial regulatory proteins, gntR family C2U39_19985 PF07702 UTRA domain C2U39_20000 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_20010 PF00005 ABC transporter C2U39_20010 PF08402 TOBE domain C2U39_20020 PF00990 Diguanylate cyclase, GGDEF domain C2U39_20020 PF00072 Response regulator receiver domain C2U39_20040 PF00583 Acetyltransferase (GNAT) family C2U39_20045 PF06628 Catalase-related immune-responsive C2U39_20045 PF00199 Catalase C2U39_20065 PF00293 NUDIX domain C2U39_20070 PF01594 AI-2E family transporter C2U39_20075 PF00106 short chain dehydrogenase C2U39_20080 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2U39_20085 PF13416 Bacterial extracellular solute-binding protein C2U39_20090 PF00795 Carbon-nitrogen hydrolase C2U39_20095 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2U39_20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_20100 PF03466 LysR substrate binding domain C2U39_20105 PF00158 Sigma-54 interaction domain C2U39_20105 PF00989 PAS fold C2U39_20105 PF02954 Bacterial regulatory protein, Fis family C2U39_20110 PF00391 PEP-utilising enzyme, mobile domain C2U39_20110 PF00381 PTS HPr component phosphorylation site C2U39_20110 PF03610 PTS system fructose IIA component C2U39_20110 PF05524 PEP-utilising enzyme, N-terminal C2U39_20115 PF02734 DAK2 domain C2U39_20120 PF02733 Dak1 domain C2U39_20125 PF00860 Permease family C2U39_20130 PF03079 ARD/ARD' family C2U39_20165 PF00009 Elongation factor Tu GTP binding domain C2U39_20165 PF03144 Elongation factor Tu domain 2 C2U39_20165 PF03143 Elongation factor Tu C-terminal domain C2U39_20170 PF00679 Elongation factor G C-terminus C2U39_20170 PF03144 Elongation factor Tu domain 2 C2U39_20170 PF14492 Elongation Factor G, domain II C2U39_20170 PF00009 Elongation factor Tu GTP binding domain C2U39_20170 PF03764 Elongation factor G, domain IV C2U39_20175 PF00177 Ribosomal protein S7p/S5e C2U39_20180 PF00164 Ribosomal protein S12/S23 C2U39_20185 PF04077 DsrH like protein C2U39_20190 PF02635 DsrE/DsrF-like family C2U39_20195 PF02635 DsrE/DsrF-like family C2U39_20200 PF01042 Endoribonuclease L-PSP C2U39_20205 PF13309 HTH domain C2U39_20205 PF08348 YheO-like PAS domain C2U39_20210 PF04997 RNA polymerase Rpb1, domain 1 C2U39_20210 PF04983 RNA polymerase Rpb1, domain 3 C2U39_20210 PF05000 RNA polymerase Rpb1, domain 4 C2U39_20210 PF04998 RNA polymerase Rpb1, domain 5 C2U39_20210 PF00623 RNA polymerase Rpb1, domain 2 C2U39_20215 PF04561 RNA polymerase Rpb2, domain 2 C2U39_20215 PF04560 RNA polymerase Rpb2, domain 7 C2U39_20215 PF00562 RNA polymerase Rpb2, domain 6 C2U39_20215 PF10385 RNA polymerase beta subunit external 1 domain C2U39_20215 PF04563 RNA polymerase beta subunit C2U39_20215 PF04565 RNA polymerase Rpb2, domain 3 C2U39_20220 PF16320 Ribosomal protein L7/L12 dimerisation domain C2U39_20220 PF00542 Ribosomal protein L7/L12 C-terminal domain C2U39_20225 PF00466 Ribosomal protein L10 C2U39_20230 PF00687 Ribosomal protein L1p/L10e family C2U39_20235 PF03946 Ribosomal protein L11, N-terminal domain C2U39_20235 PF00298 Ribosomal protein L11, RNA binding domain C2U39_20240 PF00467 KOW motif C2U39_20240 PF02357 Transcription termination factor nusG C2U39_20245 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C2U39_20255 PF03143 Elongation factor Tu C-terminal domain C2U39_20255 PF03144 Elongation factor Tu domain 2 C2U39_20255 PF00009 Elongation factor Tu GTP binding domain C2U39_20270 PF00485 Phosphoribulokinase / Uridine kinase family C2U39_20275 PF08279 HTH domain C2U39_20275 PF03099 Biotin/lipoate A/B protein ligase family C2U39_20275 PF02237 Biotin protein ligase C terminal domain C2U39_20280 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C2U39_20280 PF01565 FAD binding domain C2U39_20285 PF02254 TrkA-N domain C2U39_20285 PF02080 TrkA-C domain C2U39_20290 PF02386 Cation transport protein C2U39_20295 PF01751 Toprim domain C2U39_20295 PF01131 DNA topoisomerase C2U39_20300 PF03264 NapC/NirT cytochrome c family, N-terminal region C2U39_20305 PF01568 Molydopterin dinucleotide binding domain C2U39_20305 PF18364 Molybdopterin oxidoreductase N-terminal domain C2U39_20305 PF00384 Molybdopterin oxidoreductase C2U39_20315 PF08918 PhoQ Sensor C2U39_20315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_20320 PF00486 Transcriptional regulatory protein, C terminal C2U39_20320 PF00072 Response regulator receiver domain C2U39_20335 PF01794 Ferric reductase like transmembrane component C2U39_20340 PF00174 Oxidoreductase molybdopterin binding domain C2U39_20350 PF06496 Protein of unknown function (DUF1097) C2U39_20355 PF00158 Sigma-54 interaction domain C2U39_20355 PF00072 Response regulator receiver domain C2U39_20365 PF00512 His Kinase A (phospho-acceptor) domain C2U39_20365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_20385 PF03061 Thioesterase superfamily C2U39_20385 PF00571 CBS domain C2U39_20385 PF07085 DRTGG domain C2U39_20385 PF00392 Bacterial regulatory proteins, gntR family C2U39_20395 PF01037 Lrp/AsnC ligand binding domain C2U39_20400 PF03590 Aspartate-ammonia ligase C2U39_20410 PF02861 Clp amino terminal domain, pathogenicity island component C2U39_20410 PF10431 C-terminal, D2-small domain, of ClpB protein C2U39_20410 PF17871 AAA lid domain C2U39_20410 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_20410 PF07724 AAA domain (Cdc48 subfamily) C2U39_20420 PF00849 RNA pseudouridylate synthase C2U39_20420 PF01479 S4 domain C2U39_20425 PF13525 Outer membrane lipoprotein C2U39_20430 PF03313 Serine dehydratase alpha chain C2U39_20435 PF08348 YheO-like PAS domain C2U39_20435 PF13309 HTH domain C2U39_20440 PF02233 NAD(P) transhydrogenase beta subunit C2U39_20445 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2U39_20445 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C2U39_20445 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2U39_20450 PF00465 Iron-containing alcohol dehydrogenase C2U39_20455 PF06719 AraC-type transcriptional regulator N-terminus C2U39_20455 PF12833 Helix-turn-helix domain C2U39_20460 PF08212 Lipocalin-like domain C2U39_20475 PF00672 HAMP domain C2U39_20475 PF02743 Cache domain C2U39_20475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_20485 PF03466 LysR substrate binding domain C2U39_20485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_20505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U39_20505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U39_20510 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C2U39_20510 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C2U39_20515 PF02863 Arginine repressor, C-terminal domain C2U39_20515 PF01316 Arginine repressor, DNA binding domain C2U39_20520 PF03606 C4-dicarboxylate anaerobic carrier C2U39_20525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U39_20525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U39_20530 PF00696 Amino acid kinase family C2U39_20545 PF00672 HAMP domain C2U39_20545 PF02743 Cache domain C2U39_20545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U39_20550 PF02653 Branched-chain amino acid transport system / permease component C2U39_20555 PF00005 ABC transporter C2U39_20560 PF13407 Periplasmic binding protein domain C2U39_20565 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2U39_20565 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2U39_20565 PF00703 Glycosyl hydrolases family 2 C2U39_20565 PF16353 Domain of unknown function(DUF4981) C2U39_20565 PF02929 Beta galactosidase small chain C2U39_20570 PF00356 Bacterial regulatory proteins, lacI family C2U39_20575 PF16363 GDP-mannose 4,6 dehydratase C2U39_20580 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C2U39_20580 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C2U39_20585 PF08544 GHMP kinases C terminal C2U39_20585 PF00288 GHMP kinases N terminal domain C2U39_20585 PF10509 Galactokinase galactose-binding signature C2U39_20590 PF01263 Aldose 1-epimerase C2U39_20595 PF00248 Aldo/keto reductase family C2U39_20600 PF02673 Bacitracin resistance protein BacA C2U39_20605 PF12973 ChrR Cupin-like domain C2U39_20610 PF04545 Sigma-70, region 4 C2U39_20610 PF04542 Sigma-70 region 2 C2U39_20620 PF00750 tRNA synthetases class I (R) C2U39_20620 PF05746 DALR anticodon binding domain C2U39_20620 PF03485 Arginyl tRNA synthetase N terminal domain C2U39_20630 PF00227 Proteasome subunit C2U39_20635 PF10431 C-terminal, D2-small domain, of ClpB protein C2U39_20635 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_20635 PF07724 AAA domain (Cdc48 subfamily) C2U39_20640 PF07690 Major Facilitator Superfamily C2U39_20655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_20660 PF00005 ABC transporter C2U39_20675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U39_20675 PF04324 BFD-like [2Fe-2S] binding domain C2U39_20675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U39_20675 PF18267 Rubredoxin NAD+ reductase C-terminal domain C2U39_20675 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_20680 PF13806 Rieske-like [2Fe-2S] domain C2U39_20685 PF01226 Formate/nitrite transporter C2U39_20690 PF14824 Sirohaem biosynthesis protein central C2U39_20690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U39_20690 PF10414 Sirohaem synthase dimerisation region C2U39_20695 PF01769 Divalent cation transporter C2U39_20695 PF00571 CBS domain C2U39_20695 PF03448 MgtE intracellular N domain C2U39_20700 PF03737 Aldolase/RraA C2U39_20705 PF02592 Putative vitamin uptake transporter C2U39_20715 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C2U39_20720 PF00034 Cytochrome c C2U39_20725 PF00270 DEAD/DEAH box helicase C2U39_20725 PF00271 Helicase conserved C-terminal domain C2U39_20725 PF16124 RecQ zinc-binding C2U39_20725 PF09382 RQC domain C2U39_20725 PF00570 HRDC domain C2U39_20730 PF03061 Thioesterase superfamily C2U39_20745 PF03475 3-alpha domain C2U39_20745 PF03473 MOSC domain C2U39_20750 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_20755 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_20760 PF00005 ABC transporter C2U39_20760 PF08402 TOBE domain C2U39_20765 PF13416 Bacterial extracellular solute-binding protein C2U39_20770 PF13416 Bacterial extracellular solute-binding protein C2U39_20780 PF00120 Glutamine synthetase, catalytic domain C2U39_20785 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2U39_20800 PF05981 CreA protein C2U39_20805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U39_20805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U39_20810 PF00012 Hsp70 protein C2U39_20825 PF02903 Alpha amylase, N-terminal ig-like domain C2U39_20825 PF00128 Alpha amylase, catalytic domain C2U39_20840 PF05958 tRNA (Uracil-5-)-methyltransferase C2U39_20845 PF00486 Transcriptional regulatory protein, C terminal C2U39_20845 PF00072 Response regulator receiver domain C2U39_20855 PF00512 His Kinase A (phospho-acceptor) domain C2U39_20855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_20855 PF00672 HAMP domain C2U39_20865 PF03949 Malic enzyme, NAD binding domain C2U39_20865 PF00390 Malic enzyme, N-terminal domain C2U39_20870 PF11066 Protein of unknown function (DUF2867) C2U39_20870 PF13460 NAD(P)H-binding C2U39_20875 PF01197 Ribosomal protein L31 C2U39_20880 PF18074 Primosomal protein N C-terminal domain C2U39_20880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C2U39_20880 PF00270 DEAD/DEAH box helicase C2U39_20880 PF17764 3′ DNA-binding domain (3′BD) C2U39_20880 PF00271 Helicase conserved C-terminal domain C2U39_20885 PF00440 Bacterial regulatory proteins, tetR family C2U39_20895 PF00691 OmpA family C2U39_20895 PF01389 OmpA-like transmembrane domain C2U39_20900 PF00291 Pyridoxal-phosphate dependent enzyme C2U39_20900 PF00585 C-terminal regulatory domain of Threonine dehydratase C2U39_20905 PF00920 Dehydratase family C2U39_20910 PF01063 Amino-transferase class IV C2U39_20920 PF00205 Thiamine pyrophosphate enzyme, central domain C2U39_20920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U39_20920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U39_20930 PF13335 Magnesium chelatase, subunit ChlI C-terminal C2U39_20930 PF01078 Magnesium chelatase, subunit ChlI C2U39_20935 PF01553 Acyltransferase C2U39_20940 PF01553 Acyltransferase C2U39_20945 PF04463 Protein of unknown function (DUF523) C2U39_20955 PF00857 Isochorismatase family C2U39_20960 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C2U39_20960 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C2U39_20965 PF01323 DSBA-like thioredoxin domain C2U39_20970 PF01636 Phosphotransferase enzyme family C2U39_20975 PF13746 4Fe-4S dicluster domain C2U39_20975 PF12801 4Fe-4S binding domain C2U39_20975 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C2U39_20980 PF06288 Protein of unknown function (DUF1040) C2U39_20985 PF00990 Diguanylate cyclase, GGDEF domain C2U39_20985 PF00563 EAL domain C2U39_20985 PF01590 GAF domain C2U39_20985 PF00360 Phytochrome region C2U39_20990 PF09278 MerR, DNA binding C2U39_20990 PF00376 MerR family regulatory protein C2U39_20995 PF00403 Heavy-metal-associated domain C2U39_21000 PF00156 Phosphoribosyl transferase domain C2U39_21005 PF01138 3' exoribonuclease family, domain 1 C2U39_21005 PF03725 3' exoribonuclease family, domain 2 C2U39_21010 PF08340 Domain of unknown function (DUF1732) C2U39_21010 PF03755 YicC-like family, N-terminal region C2U39_21020 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C2U39_21025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U39_21030 PF00535 Glycosyl transferase family 2 C2U39_21035 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U39_21040 PF01467 Cytidylyltransferase-like C2U39_21045 PF04393 Protein of unknown function (DUF535) C2U39_21050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C2U39_21050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C2U39_21050 PF06827 Zinc finger found in FPG and IleRS C2U39_21060 PF00471 Ribosomal protein L33 C2U39_21065 PF00830 Ribosomal L28 family C2U39_21070 PF04002 RadC-like JAB domain C2U39_21075 PF02441 Flavoprotein C2U39_21075 PF04127 DNA / pantothenate metabolism flavoprotein C2U39_21080 PF00692 dUTPase C2U39_21085 PF00440 Bacterial regulatory proteins, tetR family C2U39_21100 PF00924 Mechanosensitive ion channel C2U39_21100 PF05552 Conserved TM helix C2U39_21110 PF00342 Phosphoglucose isomerase C2U39_21115 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C2U39_21115 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C2U39_21120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_21120 PF03466 LysR substrate binding domain C2U39_21130 PF00583 Acetyltransferase (GNAT) family C2U39_21130 PF13380 CoA binding domain C2U39_21130 PF13607 Succinyl-CoA ligase like flavodoxin domain C2U39_21155 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_21160 PF01612 3'-5' exonuclease C2U39_21160 PF00476 DNA polymerase family A C2U39_21160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2U39_21160 PF01367 5'-3' exonuclease, C-terminal SAM fold C2U39_21170 PF06005 Cell division protein ZapB C2U39_21180 PF06426 Serine acetyltransferase, N-terminal C2U39_21180 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_21185 PF16916 Dimerisation domain of Zinc Transporter C2U39_21185 PF01545 Cation efflux family C2U39_21190 PF00072 Response regulator receiver domain C2U39_21190 PF00486 Transcriptional regulatory protein, C terminal C2U39_21195 PF00672 HAMP domain C2U39_21195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_21195 PF00512 His Kinase A (phospho-acceptor) domain C2U39_21195 PF16527 Two-component sensor protein CpxA, periplasmic domain C2U39_21200 PF00588 SpoU rRNA Methylase family C2U39_21205 PF01554 MatE C2U39_21210 PF02630 SCO1/SenC C2U39_21220 PF01726 LexA DNA binding domain C2U39_21220 PF00717 Peptidase S24-like C2U39_21225 PF01553 Acyltransferase C2U39_21230 PF01040 UbiA prenyltransferase family C2U39_21235 PF04345 Chorismate lyase C2U39_21240 PF03748 Flagellar basal body-associated protein FliL C2U39_21260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U39_21260 PF00356 Bacterial regulatory proteins, lacI family C2U39_21265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U39_21275 PF03611 PTS system sugar-specific permease component C2U39_21300 PF04932 O-Antigen ligase C2U39_21310 PF01370 NAD dependent epimerase/dehydratase family C2U39_21315 PF00440 Bacterial regulatory proteins, tetR family C2U39_21315 PF08360 QacR-like protein, C-terminal region C2U39_21320 PF00155 Aminotransferase class I and II C2U39_21325 PF00107 Zinc-binding dehydrogenase C2U39_21325 PF08240 Alcohol dehydrogenase GroES-like domain C2U39_21330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2U39_21335 PF00990 Diguanylate cyclase, GGDEF domain C2U39_21335 PF00563 EAL domain C2U39_21335 PF03707 Bacterial signalling protein N terminal repeat C2U39_21340 PF13361 UvrD-like helicase C-terminal domain C2U39_21340 PF00580 UvrD/REP helicase N-terminal domain C2U39_21345 PF00266 Aminotransferase class-V C2U39_21350 PF02657 Fe-S metabolism associated domain C2U39_21355 PF00899 ThiF family C2U39_21385 PF12724 Flavodoxin domain C2U39_21390 PF02386 Cation transport protein C2U39_21395 PF01205 Uncharacterized protein family UPF0029 C2U39_21395 PF09186 Domain of unknown function (DUF1949) C2U39_21400 PF00557 Metallopeptidase family M24 C2U39_21405 PF13193 AMP-binding enzyme C-terminal domain C2U39_21405 PF00501 AMP-binding enzyme C2U39_21410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C2U39_21410 PF00378 Enoyl-CoA hydratase/isomerase C2U39_21410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C2U39_21415 PF00108 Thiolase, N-terminal domain C2U39_21415 PF02803 Thiolase, C-terminal domain C2U39_21420 PF00072 Response regulator receiver domain C2U39_21420 PF00486 Transcriptional regulatory protein, C terminal C2U39_21425 PF00512 His Kinase A (phospho-acceptor) domain C2U39_21425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_21425 PF00672 HAMP domain C2U39_21430 PF01547 Bacterial extracellular solute-binding protein C2U39_21445 PF01206 Sulfurtransferase TusA C2U39_21450 PF01042 Endoribonuclease L-PSP C2U39_21470 PF00691 OmpA family C2U39_21470 PF13488 Glycine zipper C2U39_21485 PF00857 Isochorismatase family C2U39_21490 PF03352 Methyladenine glycosylase C2U39_21495 PF02091 Glycyl-tRNA synthetase alpha subunit C2U39_21500 PF02092 Glycyl-tRNA synthetase beta subunit C2U39_21500 PF05746 DALR anticodon binding domain C2U39_21505 PF01555 DNA methylase C2U39_21515 PF00360 Phytochrome region C2U39_21515 PF00990 Diguanylate cyclase, GGDEF domain C2U39_21515 PF01590 GAF domain C2U39_21515 PF00563 EAL domain C2U39_21530 PF03222 Tryptophan/tyrosine permease family C2U39_21535 PF03222 Tryptophan/tyrosine permease family C2U39_21540 PF01212 Beta-eliminating lyase C2U39_21555 PF13592 Winged helix-turn helix C2U39_21555 PF13358 DDE superfamily endonuclease C2U39_21560 PF12801 4Fe-4S binding domain C2U39_21570 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_21570 PF18113 Rubredoxin binding C-terminal domain C2U39_21575 PF00753 Metallo-beta-lactamase superfamily C2U39_21575 PF00301 Rubredoxin C2U39_21575 PF00258 Flavodoxin C2U39_21580 PF00158 Sigma-54 interaction domain C2U39_21580 PF01590 GAF domain C2U39_21585 PF00356 Bacterial regulatory proteins, lacI family C2U39_21590 PF13458 Periplasmic binding protein C2U39_21595 PF02653 Branched-chain amino acid transport system / permease component C2U39_21600 PF11862 Domain of unknown function (DUF3382) C2U39_21600 PF02653 Branched-chain amino acid transport system / permease component C2U39_21605 PF12399 Branched-chain amino acid ATP-binding cassette transporter C2U39_21605 PF00005 ABC transporter C2U39_21610 PF00005 ABC transporter C2U39_21620 PF01810 LysE type translocator C2U39_21625 PF00581 Rhodanese-like domain C2U39_21630 PF01694 Rhomboid family C2U39_21630 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C2U39_21635 PF12262 Bacterial virulence factor lipase N-terminal C2U39_21640 PF04380 Membrane fusogenic activity C2U39_21645 PF00175 Oxidoreductase NAD-binding domain C2U39_21650 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C2U39_21660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U39_21660 PF07497 Rho termination factor, RNA-binding domain C2U39_21660 PF07498 Rho termination factor, N-terminal domain C2U39_21665 PF00085 Thioredoxin C2U39_21670 PF00271 Helicase conserved C-terminal domain C2U39_21670 PF00270 DEAD/DEAH box helicase C2U39_21675 PF02541 Ppx/GppA phosphatase family C2U39_21685 PF04445 Putative SAM-dependent methyltransferase C2U39_21690 PF00990 Diguanylate cyclase, GGDEF domain C2U39_21690 PF00563 EAL domain C2U39_21690 PF03707 Bacterial signalling protein N terminal repeat C2U39_21695 PF01432 Peptidase family M3 C2U39_21700 PF00490 Delta-aminolevulinic acid dehydratase C2U39_21705 PF01026 TatD related DNase C2U39_21710 PF00902 Sec-independent protein translocase protein (TatC) C2U39_21715 PF02416 mttA/Hcf106 family C2U39_21720 PF02416 mttA/Hcf106 family C2U39_21725 PF03109 ABC1 family C2U39_21730 PF02036 SCP-2 sterol transfer family C2U39_21735 PF01209 ubiE/COQ5 methyltransferase family C2U39_21740 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C2U39_21745 PF07969 Amidohydrolase family C2U39_21785 PF03544 Gram-negative bacterial TonB protein C-terminal C2U39_21790 PF02472 Biopolymer transport protein ExbD/TolR C2U39_21795 PF01618 MotA/TolQ/ExbB proton channel family C2U39_21800 PF01618 MotA/TolQ/ExbB proton channel family C2U39_21810 PF00196 Bacterial regulatory proteins, luxR family C2U39_21810 PF03472 Autoinducer binding domain C2U39_21815 PF01380 SIS domain C2U39_21820 PF00455 DeoR C terminal sensor domain C2U39_21820 PF08220 DeoR-like helix-turn-helix domain C2U39_21825 PF00072 Response regulator receiver domain C2U39_21825 PF00486 Transcriptional regulatory protein, C terminal C2U39_21830 PF00512 His Kinase A (phospho-acceptor) domain C2U39_21830 PF00672 HAMP domain C2U39_21830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_21835 PF00905 Penicillin binding protein transpeptidase domain C2U39_21840 PF06123 Inner membrane protein CreD C2U39_21845 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_21845 PF14602 Hexapeptide repeat of succinyl-transferase C2U39_21845 PF12804 MobA-like NTP transferase domain C2U39_21850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C2U39_21850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C2U39_21855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U39_21855 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2U39_21860 PF00231 ATP synthase C2U39_21865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U39_21865 PF00306 ATP synthase alpha/beta chain, C terminal domain C2U39_21865 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2U39_21870 PF00213 ATP synthase delta (OSCP) subunit C2U39_21875 PF00430 ATP synthase B/B' CF(0) C2U39_21880 PF00137 ATP synthase subunit C C2U39_21885 PF00119 ATP synthase A chain C2U39_21895 PF17762 HTH domain found in ParB protein C2U39_21895 PF02195 ParB-like nuclease domain C2U39_21900 PF13614 AAA domain C2U39_21905 PF02527 rRNA small subunit methyltransferase G C2U39_21910 PF13932 GidA associated domain C2U39_21910 PF01134 Glucose inhibited division protein A C2U39_21915 PF00258 Flavodoxin C2U39_21920 PF00593 TonB dependent receptor C2U39_21920 PF07715 TonB-dependent Receptor Plug Domain C2U39_21925 PF00005 ABC transporter C2U39_21930 PF00005 ABC transporter C2U39_21935 PF01497 Periplasmic binding protein C2U39_21940 PF01032 FecCD transport family C2U39_21965 PF12008 Type I restriction and modification enzyme - subunit R C terminal C2U39_21965 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U39_21965 PF18766 SWI2/SNF2 ATPase C2U39_21995 PF12161 HsdM N-terminal domain C2U39_21995 PF02384 N-6 DNA Methylase C2U39_22005 PF13356 Arm DNA-binding domain C2U39_22005 PF00589 Phage integrase family C2U39_22010 PF13657 HipA N-terminal domain C2U39_22010 PF07804 HipA-like C-terminal domain C2U39_22025 PF00589 Phage integrase family C2U39_22025 PF13495 Phage integrase, N-terminal SAM-like domain C2U39_22030 PF00186 Dihydrofolate reductase C2U39_22035 PF01909 Nucleotidyltransferase domain C2U39_22035 PF13427 Domain of unknown function (DUF4111) C2U39_22040 PF00893 Small Multidrug Resistance protein C2U39_22045 PF00809 Pterin binding enzyme C2U39_22065 PF03551 Transcriptional regulator PadR-like family C2U39_22075 PF13610 DDE domain C2U39_22100 PF01636 Phosphotransferase enzyme family C2U39_22110 PF13610 DDE domain C2U39_22135 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C2U39_22135 PF04851 Type III restriction enzyme, res subunit C2U39_22135 PF00271 Helicase conserved C-terminal domain C2U39_22135 PF08463 EcoEI R protein C-terminal C2U39_22140 PF02384 N-6 DNA Methylase C2U39_22140 PF12161 HsdM N-terminal domain C2U39_22145 PF01420 Type I restriction modification DNA specificity domain C2U39_22185 PF00589 Phage integrase family C2U39_22185 PF02899 Phage integrase, N-terminal SAM-like domain C2U39_22190 PF12631 MnmE helical domain C2U39_22190 PF10396 GTP-binding protein TrmE N-terminus C2U39_22190 PF01926 50S ribosome-binding GTPase C2U39_22195 PF14849 YidC periplasmic domain C2U39_22195 PF02096 60Kd inner membrane protein C2U39_22200 PF01809 Putative membrane protein insertion efficiency factor C2U39_22205 PF00825 Ribonuclease P C2U39_22210 PF00468 Ribosomal protein L34 C2U39_22220 PF00528 Binding-protein-dependent transport system inner membrane component C2U39_22225 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_22230 PF11638 DnaA N-terminal domain C2U39_22230 PF08299 Bacterial dnaA protein helix-turn-helix C2U39_22230 PF00308 Bacterial dnaA protein C2U39_22235 PF02767 DNA polymerase III beta subunit, central domain C2U39_22235 PF00712 DNA polymerase III beta subunit, N-terminal domain C2U39_22235 PF02768 DNA polymerase III beta subunit, C-terminal domain C2U39_22240 PF02463 RecF/RecN/SMC N terminal domain C2U39_22245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_22245 PF18053 DNA gyrase B subunit insert domain C2U39_22245 PF00204 DNA gyrase B C2U39_22245 PF01751 Toprim domain C2U39_22245 PF00986 DNA gyrase B subunit, carboxyl terminus C2U39_22250 PF02311 AraC-like ligand binding domain C2U39_22250 PF12833 Helix-turn-helix domain C2U39_22255 PF12706 Beta-lactamase superfamily domain C2U39_22265 PF00011 Hsp20/alpha crystallin family C2U39_22270 PF00011 Hsp20/alpha crystallin family C2U39_22275 PF00155 Aminotransferase class I and II C2U39_22290 PF07690 Major Facilitator Superfamily C2U39_22295 PF00072 Response regulator receiver domain C2U39_22295 PF00486 Transcriptional regulatory protein, C terminal C2U39_22300 PF13493 Domain of unknown function (DUF4118) C2U39_22300 PF13492 GAF domain C2U39_22300 PF02702 Osmosensitive K+ channel His kinase sensor domain C2U39_22300 PF00512 His Kinase A (phospho-acceptor) domain C2U39_22300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_22305 PF02669 K+-transporting ATPase, c chain C2U39_22315 PF03814 Potassium-transporting ATPase A subunit C2U39_22325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U39_22325 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U39_22330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_22330 PF00512 His Kinase A (phospho-acceptor) domain C2U39_22330 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U39_22335 PF00873 AcrB/AcrD/AcrF family C2U39_22340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U39_22350 PF00440 Bacterial regulatory proteins, tetR family C2U39_22385 PF12146 Serine aminopeptidase, S33 C2U39_22390 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_22395 PF12105 SpoU, rRNA methylase, C-terminal C2U39_22395 PF00588 SpoU rRNA Methylase family C2U39_22400 PF02824 TGS domain C2U39_22400 PF04607 Region found in RelA / SpoT proteins C2U39_22400 PF13291 ACT domain C2U39_22405 PF01192 RNA polymerase Rpb6 C2U39_22410 PF00625 Guanylate kinase C2U39_22420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U39_22435 PF00892 EamA-like transporter family C2U39_22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_22455 PF03466 LysR substrate binding domain C2U39_22460 PF00579 tRNA synthetases class I (W and Y) C2U39_22465 PF00582 Universal stress protein family C2U39_22475 PF07055 Enoyl reductase FAD binding domain C2U39_22475 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C2U39_22475 PF12241 Trans-2-enoyl-CoA reductase catalytic region C2U39_22480 PF05230 MASE2 domain C2U39_22480 PF00990 Diguanylate cyclase, GGDEF domain C2U39_22485 PF00210 Ferritin-like domain C2U39_22495 PF07690 Major Facilitator Superfamily C2U39_22500 PF01810 LysE type translocator C2U39_22525 PF16967 E-set like domain C2U39_22525 PF15976 CS1-pili formation C-terminal C2U39_22530 PF18649 EcpB C-terminal domain C2U39_22535 PF16449 Fimbrillin MatB C2U39_22560 PF06580 Histidine kinase C2U39_22560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U39_22560 PF07694 5TMR of 5TMR-LYT C2U39_22565 PF00072 Response regulator receiver domain C2U39_22565 PF04397 LytTr DNA-binding domain C2U39_22570 PF07690 Major Facilitator Superfamily C2U39_22575 PF02222 ATP-grasp domain C2U39_22575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C2U39_22580 PF00731 AIR carboxylase C2U39_22585 PF00593 TonB dependent receptor C2U39_22585 PF07715 TonB-dependent Receptor Plug Domain C2U39_22590 PF01177 Asp/Glu/Hydantoin racemase C2U39_22635 PF13180 PDZ domain C2U39_22650 PF03389 MobA/MobL family C2U39_22650 PF01443 Viral (Superfamily 1) RNA helicase C2U39_22650 PF17841 BID domain of Bartonella effector protein (Bep) C2U39_22655 PF07820 TraC-like protein C2U39_22665 PF02534 Type IV secretory system Conjugative DNA transfer C2U39_22690 PF13614 AAA domain C2U39_22695 PF00239 Resolvase, N terminal domain C2U39_22695 PF02796 Helix-turn-helix domain of resolvase C2U39_22705 PF00239 Resolvase, N terminal domain C2U39_22705 PF02796 Helix-turn-helix domain of resolvase C2U39_22710 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ C2U39_22715 PF04221 RelB antitoxin C2U39_22725 PF00145 C-5 cytosine-specific DNA methylase C2U39_22745 PF01641 SelR domain C2U39_22760 PF01609 Transposase DDE domain C2U39_22770 PF01609 Transposase DDE domain C2U39_22780 PF00239 Resolvase, N terminal domain C2U39_22780 PF02796 Helix-turn-helix domain of resolvase C2U39_22840 PF03432 Relaxase/Mobilisation nuclease domain C2U39_22855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2U39_22870 PF00929 Exonuclease C2U39_22890 PF09278 MerR, DNA binding C2U39_22890 PF00376 MerR family regulatory protein C2U39_22905 PF00403 Heavy-metal-associated domain C2U39_22915 PF13700 Domain of unknown function (DUF4158) C2U39_22915 PF01526 Tn3 transposase DDE domain C2U39_22930 PF00239 Resolvase, N terminal domain C2U39_22930 PF02796 Helix-turn-helix domain of resolvase C2U39_22950 PF00376 MerR family regulatory protein C2U39_22950 PF13614 AAA domain C2U39_22975 PF02798 Glutathione S-transferase, N-terminal domain C2U39_22975 PF00043 Glutathione S-transferase, C-terminal domain C2U39_22985 PF06122 Conjugative relaxosome accessory transposon protein C2U39_23145 PF00565 Staphylococcal nuclease homologue C2U39_23150 PF00216 Bacterial DNA-binding protein C2U39_23220 PF17862 AAA+ lid domain C2U39_23220 PF00004 ATPase family associated with various cellular activities (AAA) C2U39_23220 PF01434 Peptidase family M41 C2U39_23255 PF01636 Phosphotransferase enzyme family C2U39_23265 PF00144 Beta-lactamase C2U39_23270 PF07690 Major Facilitator Superfamily C2U39_23275 PF03466 LysR substrate binding domain C2U39_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U39_23280 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ C2U39_23285 PF00239 Resolvase, N terminal domain C2U39_23285 PF02796 Helix-turn-helix domain of resolvase C2U39_23375 PF13614 AAA domain C2U39_23380 PF08535 KorB domain C2U39_23380 PF06613 KorB C-terminal beta-barrel domain C2U39_23380 PF02195 ParB-like nuclease domain C2U39_23430 PF00145 C-5 cytosine-specific DNA methylase C2U39_23465 PF01131 DNA topoisomerase C2U39_23465 PF01751 Toprim domain C2U39_23555 PF13098 Thioredoxin-like domain C2U39_23555 PF10411 Disulfide bond isomerase protein N-terminus C2U39_23580 PF08448 PAS fold C2U39_23580 PF08447 PAS fold C2U39_23580 PF00990 Diguanylate cyclase, GGDEF domain C2U39_23580 PF00563 EAL domain C2U39_23585 PF06834 TraU protein C2U39_23615 PF07728 AAA domain (dynein-related subfamily) C2U39_23615 PF08406 CbbQ/NirQ/NorQ C-terminal C2U39_23625 PF00436 Single-strand binding protein family C2U39_23675 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U39_23805 PF13700 Domain of unknown function (DUF4158) C2U39_23805 PF01526 Tn3 transposase DDE domain C2U39_23810 PF00239 Resolvase, N terminal domain C2U39_23810 PF02796 Helix-turn-helix domain of resolvase C2U39_23820 PF13495 Phage integrase, N-terminal SAM-like domain C2U39_23820 PF00589 Phage integrase family C2U39_23830 PF13427 Domain of unknown function (DUF4111) C2U39_23830 PF01909 Nucleotidyltransferase domain C2U39_23835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C2U39_23840 PF07690 Major Facilitator Superfamily C2U39_23845 PF00132 Bacterial transferase hexapeptide (six repeats) C2U39_23855 PF00893 Small Multidrug Resistance protein C2U39_23860 PF00809 Pterin binding enzyme C2U39_23875 PF13599 Pentapeptide repeats (9 copies) C2U39_23885 PF00809 Pterin binding enzyme C2U39_23900 PF13610 DDE domain C2U39_23910 PF13610 DDE domain C2U39_23920 PF01636 Phosphotransferase enzyme family C2U39_23925 PF13610 DDE domain C2U39_23955 PF00239 Resolvase, N terminal domain C2U39_23955 PF02796 Helix-turn-helix domain of resolvase C2U39_23960 PF01526 Tn3 transposase DDE domain C2U39_23960 PF13700 Domain of unknown function (DUF4158) C2U39_24005 PF00589 Phage integrase family C2U39_24005 PF02899 Phage integrase, N-terminal SAM-like domain C2U39_24020 PF01740 STAS domain C2U39_24020 PF00916 Sulfate permease family C2U39_24025 PF00582 Universal stress protein family C2U39_24035 PF01695 IstB-like ATP binding protein C2U39_24040 PF00665 Integrase core domain