locus-tag class description C2U40_00030 PF03958 Bacterial type II/III secretion system short domain C2U40_00030 PF00263 Bacterial type II and III secretion system protein C2U40_00045 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C2U40_00045 PF00437 Type II/IV secretion system protein C2U40_00050 PF00482 Type II secretion system (T2SS), protein F C2U40_00070 PF00114 Pilin (bacterial filament) C2U40_00070 PF07963 Prokaryotic N-terminal methylation motif C2U40_00100 PF04085 rod shape-determining protein MreC C2U40_00105 PF04093 rod shape-determining protein MreD C2U40_00110 PF02545 Maf-like protein C2U40_00115 PF10150 Ribonuclease E/G family C2U40_00115 PF00575 S1 RNA binding domain C2U40_00120 PF13116 Protein of unknown function C2U40_00120 PF13502 AsmA-like C-terminal region C2U40_00130 PF00795 Carbon-nitrogen hydrolase C2U40_00135 PF01523 Putative modulator of DNA gyrase C2U40_00145 PF01914 MarC family integral membrane protein C2U40_00150 PF07690 Major Facilitator Superfamily C2U40_00160 PF00072 Response regulator receiver domain C2U40_00165 PF00512 His Kinase A (phospho-acceptor) domain C2U40_00165 PF01627 Hpt domain C2U40_00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_00165 PF00672 HAMP domain C2U40_00165 PF00072 Response regulator receiver domain C2U40_00165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U40_00170 PF13581 Histidine kinase-like ATPase domain C2U40_00175 PF08678 Rsbr N terminal C2U40_00175 PF01740 STAS domain C2U40_00180 PF08447 PAS fold C2U40_00180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_00180 PF13426 PAS domain C2U40_00195 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C2U40_00200 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_00200 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_00200 PF01610 Transposase C2U40_00205 PF04228 Putative neutral zinc metallopeptidase C2U40_00215 PF08668 HDOD domain C2U40_00230 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_00230 PF01610 Transposase C2U40_00230 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_00235 PF00999 Sodium/hydrogen exchanger family C2U40_00240 PF02310 B12 binding domain C2U40_00240 PF02607 B12 binding domain C2U40_00240 PF02574 Homocysteine S-methyltransferase C2U40_00240 PF00809 Pterin binding enzyme C2U40_00240 PF02965 Vitamin B12 dependent methionine synthase, activation domain C2U40_00245 PF18030 RimK PreATP-grasp domain C2U40_00245 PF08443 RimK-like ATP-grasp domain C2U40_00250 PF05525 Branched-chain amino acid transport protein C2U40_00260 PF00486 Transcriptional regulatory protein, C terminal C2U40_00260 PF00072 Response regulator receiver domain C2U40_00270 PF03440 Aerolysin/Pertussis toxin (APT) domain C2U40_00270 PF01117 Aerolysin toxin C2U40_00275 PF13667 ThiC-associated domain C2U40_00275 PF01964 Radical SAM ThiC family C2U40_00280 PF02581 Thiamine monophosphate synthase C2U40_00285 PF00899 ThiF family C2U40_00295 PF05690 Thiazole biosynthesis protein ThiG C2U40_00300 PF04055 Radical SAM superfamily C2U40_00300 PF06968 Biotin and Thiamin Synthesis associated domain C2U40_00325 PF13036 Peptidoglycan-synthase activator LpoB C2U40_00345 PF00990 Diguanylate cyclase, GGDEF domain C2U40_00345 PF17151 Periplasmic sensor domain C2U40_00355 PF06055 Exopolysaccharide synthesis, ExoD C2U40_00370 PF08803 Putative mono-oxygenase ydhR C2U40_00375 PF01638 HxlR-like helix-turn-helix C2U40_00400 PF07715 TonB-dependent Receptor Plug Domain C2U40_00400 PF00593 TonB dependent receptor C2U40_00415 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C2U40_00420 PF03692 Putative zinc- or iron-chelating domain C2U40_00430 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C2U40_00435 PF02602 Uroporphyrinogen-III synthase HemD C2U40_00440 PF03900 Porphobilinogen deaminase, C-terminal domain C2U40_00440 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C2U40_00445 PF12633 Adenylate cyclase NT domain C2U40_00445 PF01295 Adenylate cyclase, class-I C2U40_00450 PF02230 Phospholipase/Carboxylesterase C2U40_00455 PF01491 Frataxin-like domain C2U40_00460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U40_00460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2U40_00465 PF01678 Diaminopimelate epimerase C2U40_00475 PF02899 Phage integrase, N-terminal SAM-like domain C2U40_00475 PF00589 Phage integrase family C2U40_00480 PF13419 Haloacid dehalogenase-like hydrolase C2U40_00490 PF00027 Cyclic nucleotide-binding domain C2U40_00490 PF13545 Crp-like helix-turn-helix domain C2U40_00500 PF07722 Peptidase C26 C2U40_00520 PF00005 ABC transporter C2U40_00530 PF02464 Competence-damaged protein C2U40_00530 PF00994 Probable molybdopterin binding domain C2U40_00535 PF00013 KH domain C2U40_00535 PF12072 Domain of unknown function (DUF3552) C2U40_00535 PF01966 HD domain C2U40_00540 PF04204 Homoserine O-succinyltransferase C2U40_00550 PF01037 Lrp/AsnC ligand binding domain C2U40_00555 PF00884 Sulfatase C2U40_00570 PF16657 Maltogenic Amylase, C-terminal domain C2U40_00570 PF02903 Alpha amylase, N-terminal ig-like domain C2U40_00570 PF00128 Alpha amylase, catalytic domain C2U40_00575 PF02308 MgtC family C2U40_00595 PF00106 short chain dehydrogenase C2U40_00600 PF03577 Peptidase family C69 C2U40_00615 PF00465 Iron-containing alcohol dehydrogenase C2U40_00625 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U40_00635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_00635 PF12793 Sugar transport-related sRNA regulator N-term C2U40_00650 PF03280 Proteobacterial lipase chaperone protein C2U40_00655 PF00561 alpha/beta hydrolase fold C2U40_00670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2U40_00670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2U40_00675 PF02698 DUF218 domain C2U40_00680 PF01752 Collagenase C2U40_00680 PF08453 Peptidase family M9 N-terminal C2U40_00690 PF00419 Fimbrial protein C2U40_00700 PF13954 PapC N-terminal domain C2U40_00700 PF13953 PapC C-terminal domain C2U40_00700 PF00577 Outer membrane usher protein C2U40_00705 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C2U40_00705 PF02753 Pili assembly chaperone PapD, C-terminal domain C2U40_00710 PF00419 Fimbrial protein C2U40_00715 PF00419 Fimbrial protein C2U40_00725 PF00501 AMP-binding enzyme C2U40_00725 PF13193 AMP-binding enzyme C-terminal domain C2U40_00730 PF13378 Enolase C-terminal domain-like C2U40_00735 PF00378 Enoyl-CoA hydratase/isomerase C2U40_00740 PF12697 Alpha/beta hydrolase family C2U40_00745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U40_00745 PF16582 Middle domain of thiamine pyrophosphate C2U40_00745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U40_00750 PF00425 chorismate binding enzyme C2U40_00755 PF01040 UbiA prenyltransferase family C2U40_00780 PF00271 Helicase conserved C-terminal domain C2U40_00780 PF03880 DbpA RNA binding domain C2U40_00780 PF00270 DEAD/DEAH box helicase C2U40_00785 PF07670 Nucleoside recognition C2U40_00785 PF07662 Na+ dependent nucleoside transporter C-terminus C2U40_00785 PF01773 Na+ dependent nucleoside transporter N-terminus C2U40_00790 PF04307 LexA-binding, inner membrane-associated putative hydrolase C2U40_00805 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C2U40_00810 PF01544 CorA-like Mg2+ transporter protein C2U40_00830 PF02080 TrkA-C domain C2U40_00830 PF03471 Transporter associated domain C2U40_00830 PF00999 Sodium/hydrogen exchanger family C2U40_00835 PF05068 Mannitol repressor C2U40_00840 PF01232 Mannitol dehydrogenase Rossmann domain C2U40_00840 PF08125 Mannitol dehydrogenase C-terminal domain C2U40_00845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U40_00845 PF02378 Phosphotransferase system, EIIC C2U40_00845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U40_00855 PF00440 Bacterial regulatory proteins, tetR family C2U40_00860 PF17876 Cold shock domain C2U40_00860 PF08206 Ribonuclease B OB domain C2U40_00860 PF00773 RNB domain C2U40_00865 PF03466 LysR substrate binding domain C2U40_00865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_00870 PF00765 Autoinducer synthase C2U40_00875 PF00196 Bacterial regulatory proteins, luxR family C2U40_00875 PF03472 Autoinducer binding domain C2U40_00880 PF01810 LysE type translocator C2U40_00885 PF00149 Calcineurin-like phosphoesterase C2U40_00885 PF02872 5'-nucleotidase, C-terminal domain C2U40_00890 PF05433 Glycine zipper 2TM domain C2U40_00895 PF00583 Acetyltransferase (GNAT) family C2U40_00905 PF01321 Creatinase/Prolidase N-terminal domain C2U40_00905 PF00557 Metallopeptidase family M24 C2U40_00910 PF00392 Bacterial regulatory proteins, gntR family C2U40_00920 PF01430 Hsp33 protein C2U40_00925 PF01479 S4 domain C2U40_00930 PF11356 Type II secretion system protein C C2U40_00935 PF03958 Bacterial type II/III secretion system short domain C2U40_00935 PF00263 Bacterial type II and III secretion system protein C2U40_00940 PF00437 Type II/IV secretion system protein C2U40_00945 PF00482 Type II secretion system (T2SS), protein F C2U40_00950 PF08334 Type II secretion system (T2SS), protein G C2U40_00950 PF07963 Prokaryotic N-terminal methylation motif C2U40_00960 PF07963 Prokaryotic N-terminal methylation motif C2U40_00960 PF12019 Type II transport protein GspH C2U40_00965 PF02501 Type II secretion system (T2SS), protein I C2U40_00965 PF07963 Prokaryotic N-terminal methylation motif C2U40_00970 PF07963 Prokaryotic N-terminal methylation motif C2U40_00970 PF11612 Type II secretion system (T2SS), protein J C2U40_00975 PF03934 Type II secretion system (T2SS), protein K C2U40_00980 PF12693 GspL periplasmic domain C2U40_00980 PF05134 Type II secretion system (T2SS), protein L C2U40_00985 PF04612 Type II secretion system (T2SS), protein M C2U40_00990 PF01203 Type II secretion system (T2SS), protein N C2U40_00995 PF00196 Bacterial regulatory proteins, luxR family C2U40_01000 PF00579 tRNA synthetases class I (W and Y) C2U40_01000 PF01479 S4 domain C2U40_01005 PF13419 Haloacid dehalogenase-like hydrolase C2U40_01010 PF00293 NUDIX domain C2U40_01015 PF00459 Inositol monophosphatase family C2U40_01020 PF03222 Tryptophan/tyrosine permease family C2U40_01025 PF01588 Putative tRNA binding domain C2U40_01030 PF06445 GyrI-like small molecule binding domain C2U40_01030 PF12833 Helix-turn-helix domain C2U40_01035 PF01340 Met Apo-repressor, MetJ C2U40_01040 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U40_01045 PF00742 Homoserine dehydrogenase C2U40_01045 PF03447 Homoserine dehydrogenase, NAD binding domain C2U40_01045 PF00696 Amino acid kinase family C2U40_01050 PF00311 Phosphoenolpyruvate carboxylase C2U40_01055 PF07687 Peptidase dimerisation domain C2U40_01055 PF01546 Peptidase family M20/M25/M40 C2U40_01060 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U40_01060 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U40_01065 PF00696 Amino acid kinase family C2U40_01070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U40_01070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U40_01075 PF00764 Arginosuccinate synthase C2U40_01080 PF00206 Lyase C2U40_01080 PF14698 Argininosuccinate lyase C-terminal C2U40_01105 PF14602 Hexapeptide repeat of succinyl-transferase C2U40_01105 PF12464 Maltose acetyltransferase C2U40_01110 PF13194 Domain of unknown function (DUF4010) C2U40_01125 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_01130 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_01135 PF12857 TOBE-like domain C2U40_01135 PF00005 ABC transporter C2U40_01140 PF03466 LysR substrate binding domain C2U40_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_01145 PF18416 N-acetylglucosamine binding protein domain 2 C2U40_01145 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C2U40_01150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_01150 PF00672 HAMP domain C2U40_01150 PF17200 Single Cache domain 2 C2U40_01185 PF03572 Peptidase family S41 C2U40_01185 PF14684 Tricorn protease C1 domain C2U40_01185 PF14685 Tricorn protease PDZ domain C2U40_01185 PF07676 WD40-like Beta Propeller Repeat C2U40_01205 PF11230 Protein of unknown function (DUF3029) C2U40_01210 PF04055 Radical SAM superfamily C2U40_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_01220 PF03466 LysR substrate binding domain C2U40_01225 PF00155 Aminotransferase class I and II C2U40_01230 PF02583 Metal-sensitive transcriptional repressor C2U40_01245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U40_01245 PF11852 Domain of unknown function (DUF3372) C2U40_01245 PF03714 Bacterial pullanase-associated domain C2U40_01245 PF18494 Pullulanase Ins domain C2U40_01245 PF17967 Pullulanase N2 domain C2U40_01250 PF00403 Heavy-metal-associated domain C2U40_01255 PF08534 Redoxin C2U40_01265 PF00271 Helicase conserved C-terminal domain C2U40_01265 PF00270 DEAD/DEAH box helicase C2U40_01280 PF03372 Endonuclease/Exonuclease/phosphatase family C2U40_01285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_01285 PF08447 PAS fold C2U40_01300 PF06062 Uncharacterised protein family (UPF0231) C2U40_01305 PF13556 PucR C-terminal helix-turn-helix domain C2U40_01305 PF17853 GGDEF-like domain C2U40_01305 PF05651 Putative sugar diacid recognition C2U40_01310 PF02447 GntP family permease C2U40_01315 PF02595 Glycerate kinase family C2U40_01325 PF00255 Glutathione peroxidase C2U40_01330 PF03466 LysR substrate binding domain C2U40_01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_01335 PF01773 Na+ dependent nucleoside transporter N-terminus C2U40_01335 PF07662 Na+ dependent nucleoside transporter C-terminus C2U40_01335 PF07670 Nucleoside recognition C2U40_01340 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2U40_01340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2U40_01345 PF00472 RF-1 domain C2U40_01350 PF00543 Nitrogen regulatory protein P-II C2U40_01355 PF13416 Bacterial extracellular solute-binding protein C2U40_01365 PF08402 TOBE domain C2U40_01365 PF00005 ABC transporter C2U40_01370 PF04261 Dyp-type peroxidase family C2U40_01375 PF01316 Arginine repressor, DNA binding domain C2U40_01375 PF02863 Arginine repressor, C-terminal domain C2U40_01380 PF00005 ABC transporter C2U40_01385 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_01390 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_01395 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_01400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C2U40_01400 PF00056 lactate/malate dehydrogenase, NAD binding domain C2U40_01405 PF08238 Sel1 repeat C2U40_01410 PF00042 Globin C2U40_01410 PF00175 Oxidoreductase NAD-binding domain C2U40_01410 PF00970 Oxidoreductase FAD-binding domain C2U40_01415 PF02082 Transcriptional regulator C2U40_01420 PF01595 Cyclin M transmembrane N-terminal domain C2U40_01420 PF03471 Transporter associated domain C2U40_01420 PF00571 CBS domain C2U40_01425 PF01578 Cytochrome C assembly protein C2U40_01430 PF00448 SRP54-type protein, GTPase domain C2U40_01430 PF02881 SRP54-type protein, helical bundle domain C2U40_01430 PF02978 Signal peptide binding domain C2U40_01435 PF00886 Ribosomal protein S16 C2U40_01440 PF05239 PRC-barrel domain C2U40_01440 PF01782 RimM N-terminal domain C2U40_01445 PF01746 tRNA (Guanine-1)-methyltransferase C2U40_01450 PF01245 Ribosomal protein L19 C2U40_01460 PF02976 DNA mismatch repair enzyme MutH C2U40_01470 PF00293 NUDIX domain C2U40_01475 PF00391 PEP-utilising enzyme, mobile domain C2U40_01475 PF01590 GAF domain C2U40_01475 PF02896 PEP-utilising enzyme, TIM barrel domain C2U40_01475 PF05524 PEP-utilising enzyme, N-terminal C2U40_01480 PF01790 Prolipoprotein diacylglyceryl transferase C2U40_01485 PF00303 Thymidylate synthase C2U40_01490 PF06965 Na+/H+ antiporter 1 C2U40_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_01500 PF03466 LysR substrate binding domain C2U40_01505 PF01022 Bacterial regulatory protein, arsR family C2U40_01510 PF01649 Ribosomal protein S20 C2U40_01515 PF03023 Lipid II flippase MurJ C2U40_01520 PF01687 Riboflavin kinase C2U40_01520 PF06574 FAD synthetase C2U40_01525 PF06827 Zinc finger found in FPG and IleRS C2U40_01525 PF00133 tRNA synthetases class I (I, L, M and V) C2U40_01525 PF08264 Anticodon-binding domain of tRNA C2U40_01530 PF01252 Signal peptidase (SPase) II C2U40_01535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U40_01540 PF02401 LytB protein C2U40_01565 PF05567 Neisseria PilC beta-propeller domain C2U40_01600 PF02540 NAD synthase C2U40_01600 PF00795 Carbon-nitrogen hydrolase C2U40_01605 PF00543 Nitrogen regulatory protein P-II C2U40_01615 PF02664 S-Ribosylhomocysteinase (LuxS) C2U40_01620 PF00990 Diguanylate cyclase, GGDEF domain C2U40_01625 PF08461 Ribonuclease R winged-helix domain C2U40_01625 PF00773 RNB domain C2U40_01625 PF17876 Cold shock domain C2U40_01625 PF00575 S1 RNA binding domain C2U40_01625 PF08206 Ribonuclease B OB domain C2U40_01630 PF00588 SpoU rRNA Methylase family C2U40_01630 PF08032 RNA 2'-O ribose methyltransferase substrate binding C2U40_01645 PF13673 Acetyltransferase (GNAT) domain C2U40_01665 PF01566 Natural resistance-associated macrophage protein C2U40_01670 PF01250 Ribosomal protein S6 C2U40_01675 PF01084 Ribosomal protein S18 C2U40_01680 PF01281 Ribosomal protein L9, N-terminal domain C2U40_01680 PF03948 Ribosomal protein L9, C-terminal domain C2U40_01685 PF00970 Oxidoreductase FAD-binding domain C2U40_01685 PF00175 Oxidoreductase NAD-binding domain C2U40_01705 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U40_01705 PF00550 Phosphopantetheine attachment site C2U40_01705 PF08659 KR domain C2U40_01705 PF16197 Ketoacyl-synthetase C-terminal extension C2U40_01705 PF08990 Erythronolide synthase docking C2U40_01705 PF00698 Acyl transferase domain C2U40_01705 PF14765 Polyketide synthase dehydratase C2U40_01705 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U40_01705 PF08240 Alcohol dehydrogenase GroES-like domain C2U40_01710 PF09335 SNARE associated Golgi protein C2U40_01715 PF00675 Insulinase (Peptidase family M16) C2U40_01715 PF05193 Peptidase M16 inactive domain C2U40_01720 PF04262 Glutamate-cysteine ligase C2U40_01730 PF00501 AMP-binding enzyme C2U40_01740 PF00583 Acetyltransferase (GNAT) family C2U40_01750 PF12592 Protein of unknown function (DUF3763) C2U40_01750 PF17868 AAA lid domain C2U40_01750 PF07728 AAA domain (dynein-related subfamily) C2U40_01755 PF05762 VWA domain containing CoxE-like protein C2U40_01765 PF00072 Response regulator receiver domain C2U40_01765 PF00990 Diguanylate cyclase, GGDEF domain C2U40_01770 PF16658 Class II release factor RF3, C-terminal domain C2U40_01770 PF00009 Elongation factor Tu GTP binding domain C2U40_01770 PF03144 Elongation factor Tu domain 2 C2U40_01775 PF13006 Insertion element 4 transposase N-terminal C2U40_01775 PF01609 Transposase DDE domain C2U40_01795 PF00583 Acetyltransferase (GNAT) family C2U40_01800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U40_01810 PF04480 Protein of unknown function (DUF559) C2U40_01820 PF03466 LysR substrate binding domain C2U40_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_01825 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2U40_01830 PF01425 Amidase C2U40_01845 PF00753 Metallo-beta-lactamase superfamily C2U40_01860 PF00270 DEAD/DEAH box helicase C2U40_01860 PF00271 Helicase conserved C-terminal domain C2U40_01865 PF05643 Putative bacterial lipoprotein (DUF799) C2U40_01875 PF03783 Curli production assembly/transport component CsgG C2U40_01880 PF03466 LysR substrate binding domain C2U40_01880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_01895 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C2U40_01900 PF00034 Cytochrome c C2U40_01900 PF03150 Di-haem cytochrome c peroxidase C2U40_01915 PF00445 Ribonuclease T2 family C2U40_01925 PF03060 Nitronate monooxygenase C2U40_01960 PF00293 NUDIX domain C2U40_01960 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C2U40_01960 PF09297 NADH pyrophosphatase zinc ribbon domain C2U40_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_01965 PF00512 His Kinase A (phospho-acceptor) domain C2U40_01965 PF16527 Two-component sensor protein CpxA, periplasmic domain C2U40_01965 PF00672 HAMP domain C2U40_01970 PF00072 Response regulator receiver domain C2U40_01970 PF00486 Transcriptional regulatory protein, C terminal C2U40_01975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_01980 PF00005 ABC transporter C2U40_01980 PF02687 FtsX-like permease family C2U40_01980 PF12704 MacB-like periplasmic core domain C2U40_01985 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_01990 PF00005 ABC transporter C2U40_01995 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_02000 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_02005 PF00291 Pyridoxal-phosphate dependent enzyme C2U40_02010 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2U40_02010 PF00326 Prolyl oligopeptidase family C2U40_02035 PF08335 GlnD PII-uridylyltransferase C2U40_02035 PF03710 Glutamate-ammonia ligase adenylyltransferase C2U40_02045 PF02743 Cache domain C2U40_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_02045 PF00672 HAMP domain C2U40_02050 PF00027 Cyclic nucleotide-binding domain C2U40_02050 PF00520 Ion transport protein C2U40_02055 PF08239 Bacterial SH3 domain C2U40_02060 PF00171 Aldehyde dehydrogenase family C2U40_02060 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C2U40_02060 PF01619 Proline dehydrogenase C2U40_02060 PF14850 DNA-binding domain of Proline dehydrogenase C2U40_02065 PF09297 NADH pyrophosphatase zinc ribbon domain C2U40_02065 PF00293 NUDIX domain C2U40_02070 PF01208 Uroporphyrinogen decarboxylase (URO-D) C2U40_02075 PF00480 ROK family C2U40_02080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U40_02080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U40_02085 PF00162 Phosphoglycerate kinase C2U40_02090 PF01116 Fructose-bisphosphate aldolase class-II C2U40_02095 PF01266 FAD dependent oxidoreductase C2U40_02105 PF11412 Disulphide bond corrector protein DsbC C2U40_02105 PF02683 Cytochrome C biogenesis protein transmembrane region C2U40_02110 PF03091 CutA1 divalent ion tolerance protein C2U40_02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_02125 PF03466 LysR substrate binding domain C2U40_02130 PF01571 Aminomethyltransferase folate-binding domain C2U40_02135 PF03937 Flavinator of succinate dehydrogenase C2U40_02145 PF00890 FAD binding domain C2U40_02145 PF02910 Fumarate reductase flavoprotein C-term C2U40_02150 PF04542 Sigma-70 region 2 C2U40_02150 PF08281 Sigma-70, region 4 C2U40_02155 PF03873 Anti sigma-E protein RseA, C-terminal domain C2U40_02155 PF03872 Anti sigma-E protein RseA, N-terminal domain C2U40_02160 PF03888 MucB/RseB N-terminal domain C2U40_02160 PF17188 MucB/RseB C-terminal domain C2U40_02170 PF00679 Elongation factor G C-terminus C2U40_02170 PF00009 Elongation factor Tu GTP binding domain C2U40_02170 PF03144 Elongation factor Tu domain 2 C2U40_02170 PF06421 GTP-binding protein LepA C-terminus C2U40_02175 PF10502 Signal peptidase, peptidase S26 C2U40_02180 PF00035 Double-stranded RNA binding motif C2U40_02180 PF14622 Ribonuclease-III-like C2U40_02185 PF07650 KH domain C2U40_02185 PF01926 50S ribosome-binding GTPase C2U40_02190 PF02565 Recombination protein O C terminal C2U40_02190 PF11967 Recombination protein O N terminal C2U40_02195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C2U40_02205 PF01116 Fructose-bisphosphate aldolase class-II C2U40_02210 PF01979 Amidohydrolase family C2U40_02215 PF03610 PTS system fructose IIA component C2U40_02220 PF03613 PTS system mannose/fructose/sorbose family IID component C2U40_02225 PF03609 PTS system sorbose-specific iic component C2U40_02230 PF03830 PTS system sorbose subfamily IIB component C2U40_02235 PF01380 SIS domain C2U40_02240 PF08013 Tagatose 6 phosphate kinase C2U40_02245 PF08220 DeoR-like helix-turn-helix domain C2U40_02245 PF00455 DeoR C terminal sensor domain C2U40_02250 PF01510 N-acetylmuramoyl-L-alanine amidase C2U40_02255 PF07308 Protein of unknown function (DUF1456) C2U40_02260 PF00072 Response regulator receiver domain C2U40_02260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U40_02260 PF01627 Hpt domain C2U40_02260 PF00512 His Kinase A (phospho-acceptor) domain C2U40_02260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_02260 PF00672 HAMP domain C2U40_02265 PF05958 tRNA (Uracil-5-)-methyltransferase C2U40_02265 PF01938 TRAM domain C2U40_02270 PF02824 TGS domain C2U40_02270 PF13291 ACT domain C2U40_02270 PF04607 Region found in RelA / SpoT proteins C2U40_02275 PF03819 MazG nucleotide pyrophosphohydrolase domain C2U40_02280 PF00117 Glutamine amidotransferase class-I C2U40_02280 PF06418 CTP synthase N-terminus C2U40_02285 PF00113 Enolase, C-terminal TIM barrel domain C2U40_02285 PF03952 Enolase, N-terminal domain C2U40_02290 PF04977 Septum formation initiator C2U40_02295 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C2U40_02300 PF02542 YgbB family C2U40_02305 PF01142 tRNA pseudouridine synthase D (TruD) C2U40_02310 PF01975 Survival protein SurE C2U40_02320 PF09335 SNARE associated Golgi protein C2U40_02325 PF01476 LysM domain C2U40_02325 PF01551 Peptidase family M23 C2U40_02330 PF04545 Sigma-70, region 4 C2U40_02330 PF04539 Sigma-70 region 3 C2U40_02330 PF04542 Sigma-70 region 2 C2U40_02330 PF00140 Sigma-70 factor, region 1.2 C2U40_02335 PF00814 Glycoprotease family C2U40_02340 PF01165 Ribosomal protein S21 C2U40_02345 PF09424 Yqey-like protein C2U40_02350 PF01807 CHC2 zinc finger C2U40_02350 PF08275 DNA primase catalytic core, N-terminal domain C2U40_02350 PF08278 DNA primase DnaG DnaB-binding C2U40_02350 PF10410 DnaB-helicase binding domain of primase C2U40_02355 PF00140 Sigma-70 factor, region 1.2 C2U40_02355 PF04542 Sigma-70 region 2 C2U40_02355 PF04545 Sigma-70, region 4 C2U40_02355 PF04539 Sigma-70 region 3 C2U40_02355 PF04546 Sigma-70, non-essential region C2U40_02355 PF03979 Sigma-70 factor, region 1.1 C2U40_02365 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_02365 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_02365 PF01610 Transposase C2U40_02370 PF00128 Alpha amylase, catalytic domain C2U40_02385 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C2U40_02385 PF02844 Phosphoribosylglycinamide synthetase, N domain C2U40_02385 PF02843 Phosphoribosylglycinamide synthetase, C domain C2U40_02390 PF02142 MGS-like domain C2U40_02390 PF01808 AICARFT/IMPCHase bienzyme C2U40_02395 PF13411 MerR HTH family regulatory protein C2U40_02400 PF01872 RibD C-terminal domain C2U40_02405 PF03889 Alternative ribosome-rescue factor A C2U40_02410 PF06969 HemN C-terminal domain C2U40_02410 PF04055 Radical SAM superfamily C2U40_02415 PF01725 Ham1 family C2U40_02420 PF07690 Major Facilitator Superfamily C2U40_02425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2U40_02425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U40_02435 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_02435 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_02435 PF01610 Transposase C2U40_02440 PF13302 Acetyltransferase (GNAT) domain C2U40_02445 PF13302 Acetyltransferase (GNAT) domain C2U40_02450 PF01447 Thermolysin metallopeptidase, catalytic domain C2U40_02450 PF03413 Peptidase propeptide and YPEB domain C2U40_02450 PF07504 Fungalysin/Thermolysin Propeptide Motif C2U40_02450 PF04151 Bacterial pre-peptidase C-terminal domain C2U40_02450 PF02868 Thermolysin metallopeptidase, alpha-helical domain C2U40_02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_02455 PF03466 LysR substrate binding domain C2U40_02460 PF07690 Major Facilitator Superfamily C2U40_02465 PF00267 Gram-negative porin C2U40_02470 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_02470 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_02470 PF01610 Transposase C2U40_02475 PF03605 Anaerobic c4-dicarboxylate membrane transporter C2U40_02480 PF10415 Fumarase C C-terminus C2U40_02480 PF00206 Lyase C2U40_02485 PF04186 FxsA cytoplasmic membrane protein C2U40_02490 PF01554 MatE C2U40_02495 PF00166 Chaperonin 10 Kd subunit C2U40_02500 PF00118 TCP-1/cpn60 chaperonin family C2U40_02510 PF03707 Bacterial signalling protein N terminal repeat C2U40_02510 PF00990 Diguanylate cyclase, GGDEF domain C2U40_02510 PF13188 PAS domain C2U40_02510 PF00563 EAL domain C2U40_02520 PF00849 RNA pseudouridylate synthase C2U40_02525 PF18339 RapA N-terminal Tudor like domain 1 C2U40_02525 PF18337 RapA N-terminal Tudor like domain C2U40_02525 PF12137 RNA polymerase recycling family C-terminal C2U40_02525 PF00271 Helicase conserved C-terminal domain C2U40_02525 PF00176 SNF2 family N-terminal domain C2U40_02550 PF01810 LysE type translocator C2U40_02590 PF05930 Prophage CP4-57 regulatory protein (AlpA) C2U40_02630 PF05973 Phage derived protein Gp49-like (DUF891) C2U40_02635 PF01381 Helix-turn-helix C2U40_02640 PF09588 YqaJ-like viral recombinase domain C2U40_02690 PF04002 RadC-like JAB domain C2U40_02735 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A C2U40_02740 PF02384 N-6 DNA Methylase C2U40_02745 PF01420 Type I restriction modification DNA specificity domain C2U40_02765 PF01695 IstB-like ATP binding protein C2U40_02770 PF00665 Integrase core domain C2U40_02790 PF00717 Peptidase S24-like C2U40_02795 PF11798 IMS family HHH motif C2U40_02795 PF11799 impB/mucB/samB family C-terminal domain C2U40_02795 PF13438 Domain of unknown function (DUF4113) C2U40_02795 PF00817 impB/mucB/samB family C2U40_02800 PF00665 Integrase core domain C2U40_02805 PF01695 IstB-like ATP binding protein C2U40_02815 PF01420 Type I restriction modification DNA specificity domain C2U40_02840 PF02954 Bacterial regulatory protein, Fis family C2U40_02845 PF01207 Dihydrouridine synthase (Dus) C2U40_02850 PF02321 Outer membrane efflux protein C2U40_02855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_02885 PF00072 Response regulator receiver domain C2U40_02890 PF00854 POT family C2U40_02895 PF00483 Nucleotidyl transferase C2U40_02905 PF00459 Inositol monophosphatase family C2U40_02910 PF03795 YCII-related domain C2U40_02915 PF04279 Intracellular septation protein A C2U40_02920 PF00282 Pyridoxal-dependent decarboxylase conserved domain C2U40_02925 PF03006 Haemolysin-III related C2U40_02930 PF06826 Predicted Permease Membrane Region C2U40_02930 PF02080 TrkA-C domain C2U40_02940 PF01584 CheW-like domain C2U40_02940 PF00072 Response regulator receiver domain C2U40_02945 PF13472 GDSL-like Lipase/Acylhydrolase family C2U40_02950 PF00005 ABC transporter C2U40_02960 PF08338 Domain of unknown function (DUF1731) C2U40_02960 PF01370 NAD dependent epimerase/dehydratase family C2U40_02965 PF00563 EAL domain C2U40_02965 PF12792 CSS motif domain associated with EAL C2U40_02970 PF00155 Aminotransferase class I and II C2U40_02975 PF04389 Peptidase family M28 C2U40_02975 PF01483 Proprotein convertase P-domain C2U40_02980 PF02390 Putative methyltransferase C2U40_02985 PF04320 Protein with unknown function (DUF469) C2U40_02990 PF04960 Glutaminase C2U40_02995 PF00581 Rhodanese-like domain C2U40_03000 PF05922 Peptidase inhibitor I9 C2U40_03000 PF00082 Subtilase family C2U40_03005 PF06004 Bacterial protein of unknown function (DUF903) C2U40_03010 PF00005 ABC transporter C2U40_03010 PF00664 ABC transporter transmembrane region C2U40_03015 PF00561 alpha/beta hydrolase fold C2U40_03035 PF00589 Phage integrase family C2U40_03055 PF02899 Phage integrase, N-terminal SAM-like domain C2U40_03055 PF00589 Phage integrase family C2U40_03090 PF00563 EAL domain C2U40_03090 PF00990 Diguanylate cyclase, GGDEF domain C2U40_03090 PF00360 Phytochrome region C2U40_03090 PF01590 GAF domain C2U40_03095 PF05547 Immune inhibitor A peptidase M6 C2U40_03095 PF00801 PKD domain C2U40_03105 PF06877 Regulator of ribonuclease activity B C2U40_03110 PF03707 Bacterial signalling protein N terminal repeat C2U40_03110 PF00563 EAL domain C2U40_03110 PF00990 Diguanylate cyclase, GGDEF domain C2U40_03130 PF09905 DNA-binding protein VF530 C2U40_03135 PF02666 Phosphatidylserine decarboxylase C2U40_03140 PF03193 RsgA GTPase C2U40_03145 PF00929 Exonuclease C2U40_03185 PF00313 'Cold-shock' DNA-binding domain C2U40_03195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_03195 PF00672 HAMP domain C2U40_03200 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U40_03205 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U40_03240 PF06483 Chitinase C C2U40_03240 PF00704 Glycosyl hydrolases family 18 C2U40_03255 PF02472 Biopolymer transport protein ExbD/TolR C2U40_03260 PF01618 MotA/TolQ/ExbB proton channel family C2U40_03265 PF01618 MotA/TolQ/ExbB proton channel family C2U40_03275 PF07715 TonB-dependent Receptor Plug Domain C2U40_03275 PF00593 TonB dependent receptor C2U40_03280 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_03285 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U40_03285 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_03295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_03295 PF00005 ABC transporter C2U40_03300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_03300 PF00005 ABC transporter C2U40_03310 PF01546 Peptidase family M20/M25/M40 C2U40_03310 PF07687 Peptidase dimerisation domain C2U40_03320 PF00156 Phosphoribosyl transferase domain C2U40_03330 PF07417 Sigma factor-binding transcriptional regulator Crl C2U40_03335 PF00696 Amino acid kinase family C2U40_03335 PF01472 PUA domain C2U40_03340 PF00171 Aldehyde dehydrogenase family C2U40_03350 PF00582 Universal stress protein family C2U40_03365 PF00294 pfkB family carbohydrate kinase C2U40_03370 PF04227 Indigoidine synthase A like protein C2U40_03375 PF00194 Eukaryotic-type carbonic anhydrase C2U40_03380 PF00034 Cytochrome c C2U40_03380 PF03150 Di-haem cytochrome c peroxidase C2U40_03415 PF00550 Phosphopantetheine attachment site C2U40_03420 PF00550 Phosphopantetheine attachment site C2U40_03430 PF00501 AMP-binding enzyme C2U40_03430 PF13193 AMP-binding enzyme C-terminal domain C2U40_03435 PF07977 FabA-like domain C2U40_03445 PF00221 Aromatic amino acid lyase C2U40_03470 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U40_03470 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U40_03485 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U40_03485 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U40_03495 PF00994 Probable molybdopterin binding domain C2U40_03505 PF06738 Putative threonine/serine exporter C2U40_03510 PF12821 Threonine/Serine exporter, ThrE C2U40_03515 PF00186 Dihydrofolate reductase C2U40_03520 PF00005 ABC transporter C2U40_03520 PF00571 CBS domain C2U40_03525 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_03530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C2U40_03535 PF01507 Phosphoadenosine phosphosulfate reductase family C2U40_03540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U40_03540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U40_03545 PF00175 Oxidoreductase NAD-binding domain C2U40_03545 PF00258 Flavodoxin C2U40_03545 PF00667 FAD binding domain C2U40_03550 PF02567 Phenazine biosynthesis-like protein C2U40_03555 PF00152 tRNA synthetases class II (D, K and N) C2U40_03555 PF01336 OB-fold nucleic acid binding domain C2U40_03565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_03565 PF00672 HAMP domain C2U40_03565 PF02743 Cache domain C2U40_03570 PF03616 Sodium/glutamate symporter C2U40_03575 PF00710 Asparaginase, N-terminal C2U40_03575 PF17763 Glutaminase/Asparaginase C-terminal domain C2U40_03580 PF07023 Protein of unknown function (DUF1315) C2U40_03585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U40_03585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U40_03600 PF01343 Peptidase family S49 C2U40_03605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U40_03605 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_03610 PF00881 Nitroreductase family C2U40_03615 PF14602 Hexapeptide repeat of succinyl-transferase C2U40_03615 PF12464 Maltose acetyltransferase C2U40_03630 PF01610 Transposase C2U40_03630 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_03630 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_03635 PF08240 Alcohol dehydrogenase GroES-like domain C2U40_03635 PF00107 Zinc-binding dehydrogenase C2U40_03640 PF03466 LysR substrate binding domain C2U40_03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_03645 PF02378 Phosphotransferase system, EIIC C2U40_03645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U40_03645 PF00367 phosphotransferase system, EIIB C2U40_03650 PF00474 Sodium:solute symporter family C2U40_03660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U40_03660 PF00289 Biotin carboxylase, N-terminal domain C2U40_03660 PF02785 Biotin carboxylase C-terminal domain C2U40_03665 PF00364 Biotin-requiring enzyme C2U40_03670 PF01220 Dehydroquinase class II C2U40_03675 PF00501 AMP-binding enzyme C2U40_03675 PF16177 Acetyl-coenzyme A synthetase N-terminus C2U40_03675 PF13193 AMP-binding enzyme C-terminal domain C2U40_03685 PF00563 EAL domain C2U40_03685 PF03707 Bacterial signalling protein N terminal repeat C2U40_03685 PF00990 Diguanylate cyclase, GGDEF domain C2U40_03685 PF13188 PAS domain C2U40_03705 PF02613 Nitrate reductase delta subunit C2U40_03715 PF00464 Serine hydroxymethyltransferase C2U40_03730 PF03477 ATP cone domain C2U40_03735 PF01872 RibD C-terminal domain C2U40_03735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2U40_03740 PF00677 Lumazine binding domain C2U40_03745 PF00925 GTP cyclohydrolase II C2U40_03745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C2U40_03755 PF00885 6,7-dimethyl-8-ribityllumazine synthase C2U40_03760 PF01029 NusB family C2U40_03765 PF00586 AIR synthase related protein, N-terminal domain C2U40_03765 PF02769 AIR synthase related protein, C-terminal domain C2U40_03770 PF04608 Phosphatidylglycerophosphatase A C2U40_03775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_03775 PF00005 ABC transporter C2U40_03780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_03790 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_03790 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U40_03795 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C2U40_03795 PF02780 Transketolase, C-terminal domain C2U40_03795 PF02779 Transketolase, pyrimidine binding domain C2U40_03800 PF00348 Polyprenyl synthetase C2U40_03805 PF02609 Exonuclease VII small subunit C2U40_03810 PF01618 MotA/TolQ/ExbB proton channel family C2U40_03815 PF00691 OmpA family C2U40_03815 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U40_03820 PF03449 Transcription elongation factor, N-terminal C2U40_03820 PF01272 Transcription elongation factor, GreA/GreB, C-term C2U40_03830 PF01985 CRS1 / YhbY (CRM) domain C2U40_03835 PF01728 FtsJ-like methyltransferase C2U40_03840 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_03840 PF17862 AAA+ lid domain C2U40_03840 PF06480 FtsH Extracellular C2U40_03840 PF01434 Peptidase family M41 C2U40_03845 PF00809 Pterin binding enzyme C2U40_03850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2U40_03850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2U40_03850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2U40_03850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2U40_03855 PF00121 Triosephosphate isomerase C2U40_03860 PF03840 Preprotein translocase SecG subunit C2U40_03875 PF02576 RimP N-terminal domain C2U40_03875 PF17384 RimP C-terminal SH3 domain C2U40_03880 PF08529 NusA N-terminal domain C2U40_03880 PF00575 S1 RNA binding domain C2U40_03880 PF13184 NusA-like KH domain C2U40_03885 PF04760 Translation initiation factor IF-2, N-terminal region C2U40_03885 PF00009 Elongation factor Tu GTP binding domain C2U40_03885 PF11987 Translation-initiation factor 2 C2U40_03885 PF08364 Bacterial translation initiation factor IF-2 associated region C2U40_03890 PF02033 Ribosome-binding factor A C2U40_03895 PF01509 TruB family pseudouridylate synthase (N terminal domain) C2U40_03895 PF16198 tRNA pseudouridylate synthase B C-terminal domain C2U40_03895 PF09157 Pseudouridine synthase II TruB, C-terminal C2U40_03900 PF00312 Ribosomal protein S15 C2U40_03905 PF00013 KH domain C2U40_03905 PF00575 S1 RNA binding domain C2U40_03905 PF03725 3' exoribonuclease family, domain 2 C2U40_03905 PF01138 3' exoribonuclease family, domain 1 C2U40_03905 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C2U40_03910 PF01609 Transposase DDE domain C2U40_03910 PF13006 Insertion element 4 transposase N-terminal C2U40_03915 PF07690 Major Facilitator Superfamily C2U40_03920 PF03707 Bacterial signalling protein N terminal repeat C2U40_03920 PF00563 EAL domain C2U40_03920 PF00990 Diguanylate cyclase, GGDEF domain C2U40_03925 PF02635 DsrE/DsrF-like family C2U40_03935 PF10415 Fumarase C C-terminus C2U40_03935 PF00206 Lyase C2U40_03940 PF03575 Peptidase family S51 C2U40_03945 PF13722 5TM C-terminal transporter carbon starvation CstA C2U40_03945 PF02554 Carbon starvation protein CstA C2U40_03950 PF00072 Response regulator receiver domain C2U40_03950 PF04397 LytTr DNA-binding domain C2U40_03955 PF07694 5TMR of 5TMR-LYT C2U40_03955 PF06580 Histidine kinase C2U40_03960 PF00072 Response regulator receiver domain C2U40_03960 PF00196 Bacterial regulatory proteins, luxR family C2U40_03965 PF00512 His Kinase A (phospho-acceptor) domain C2U40_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_03965 PF00989 PAS fold C2U40_03970 PF13247 4Fe-4S dicluster domain C2U40_03975 PF03916 Polysulphide reductase, NrfD C2U40_03980 PF00384 Molybdopterin oxidoreductase C2U40_03980 PF01568 Molydopterin dinucleotide binding domain C2U40_03980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U40_04000 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C2U40_04010 PF03734 L,D-transpeptidase catalytic domain C2U40_04010 PF17969 L,D-transpeptidase C-terminal domain C2U40_04020 PF01523 Putative modulator of DNA gyrase C2U40_04025 PF01523 Putative modulator of DNA gyrase C2U40_04030 PF00258 Flavodoxin C2U40_04035 PF02899 Phage integrase, N-terminal SAM-like domain C2U40_04035 PF00589 Phage integrase family C2U40_04040 PF01741 Large-conductance mechanosensitive channel, MscL C2U40_04045 PF10411 Disulfide bond isomerase protein N-terminus C2U40_04045 PF13098 Thioredoxin-like domain C2U40_04050 PF01368 DHH family C2U40_04050 PF17768 RecJ OB domain C2U40_04050 PF02272 DHHA1 domain C2U40_04055 PF13411 MerR HTH family regulatory protein C2U40_04070 PF02508 Rnf-Nqr subunit, membrane protein C2U40_04075 PF06821 Serine hydrolase C2U40_04085 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C2U40_04085 PF04055 Radical SAM superfamily C2U40_04095 PF03099 Biotin/lipoate A/B protein ligase family C2U40_04100 PF04359 Protein of unknown function (DUF493) C2U40_04105 PF00768 D-alanyl-D-alanine carboxypeptidase C2U40_04105 PF07943 Penicillin-binding protein 5, C-terminal domain C2U40_04110 PF05036 Sporulation related domain C2U40_04110 PF03330 Lytic transglycolase C2U40_04115 PF13406 Transglycosylase SLT domain C2U40_04120 PF01098 Cell cycle protein C2U40_04125 PF03717 Penicillin-binding Protein dimerisation domain C2U40_04125 PF00905 Penicillin binding protein transpeptidase domain C2U40_04130 PF02590 Predicted SPOUT methyltransferase C2U40_04140 PF01467 Cytidylyltransferase-like C2U40_04160 PF00133 tRNA synthetases class I (I, L, M and V) C2U40_04160 PF08264 Anticodon-binding domain of tRNA C2U40_04160 PF13603 Leucyl-tRNA synthetase, Domain 2 C2U40_04165 PF07295 Zinc-ribbon containing domain C2U40_04170 PF00795 Carbon-nitrogen hydrolase C2U40_04175 PF03471 Transporter associated domain C2U40_04175 PF00571 CBS domain C2U40_04180 PF02130 Uncharacterized protein family UPF0054 C2U40_04185 PF02562 PhoH-like protein C2U40_04190 PF01938 TRAM domain C2U40_04190 PF00919 Uncharacterized protein family UPF0004 C2U40_04190 PF04055 Radical SAM superfamily C2U40_04195 PF01494 FAD binding domain C2U40_04200 PF00857 Isochorismatase family C2U40_04205 PF00313 'Cold-shock' DNA-binding domain C2U40_04210 PF05230 MASE2 domain C2U40_04210 PF00990 Diguanylate cyclase, GGDEF domain C2U40_04225 PF13419 Haloacid dehalogenase-like hydrolase C2U40_04235 PF08448 PAS fold C2U40_04235 PF00990 Diguanylate cyclase, GGDEF domain C2U40_04245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U40_04245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U40_04255 PF09997 Predicted membrane protein (DUF2238) C2U40_04260 PF01132 Elongation factor P (EF-P) OB domain C2U40_04260 PF09285 Elongation factor P, C-terminal C2U40_04260 PF08207 Elongation factor P (EF-P) KOW-like domain C2U40_04275 PF00478 IMP dehydrogenase / GMP reductase domain C2U40_04295 PF00512 His Kinase A (phospho-acceptor) domain C2U40_04295 PF08521 Two-component sensor kinase N-terminal C2U40_04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_04300 PF00486 Transcriptional regulatory protein, C terminal C2U40_04300 PF00072 Response regulator receiver domain C2U40_04320 PF00501 AMP-binding enzyme C2U40_04330 PF13649 Methyltransferase domain C2U40_04335 PF06224 Winged helix DNA-binding domain C2U40_04355 PF02313 Fumarate reductase subunit D C2U40_04360 PF02300 Fumarate reductase subunit C C2U40_04365 PF13183 4Fe-4S dicluster domain C2U40_04365 PF13085 2Fe-2S iron-sulfur cluster binding domain C2U40_04370 PF02910 Fumarate reductase flavoprotein C-term C2U40_04370 PF00890 FAD binding domain C2U40_04380 PF03009 Glycerophosphoryl diester phosphodiesterase family C2U40_04385 PF00924 Mechanosensitive ion channel C2U40_04385 PF12794 Mechanosensitive ion channel inner membrane domain 1 C2U40_04385 PF12795 Mechanosensitive ion channel porin domain C2U40_04395 PF01476 LysM domain C2U40_04395 PF08525 Opacity-associated protein A N-terminal motif C2U40_04395 PF01551 Peptidase family M23 C2U40_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_04410 PF03466 LysR substrate binding domain C2U40_04425 PF00672 HAMP domain C2U40_04425 PF02743 Cache domain C2U40_04425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_04430 PF03466 LysR substrate binding domain C2U40_04435 PF00905 Penicillin binding protein transpeptidase domain C2U40_04435 PF17092 Penicillin-binding protein OB-like domain C2U40_04435 PF00912 Transglycosylase C2U40_04460 PF07660 Secretin and TonB N terminus short domain C2U40_04460 PF11741 AMIN domain C2U40_04460 PF03958 Bacterial type II/III secretion system short domain C2U40_04460 PF00263 Bacterial type II and III secretion system protein C2U40_04465 PF01202 Shikimate kinase C2U40_04470 PF01761 3-dehydroquinate synthase C2U40_04480 PF02086 D12 class N6 adenine-specific DNA methyltransferase C2U40_04495 PF00834 Ribulose-phosphate 3 epimerase family C2U40_04500 PF13419 Haloacid dehalogenase-like hydrolase C2U40_04505 PF00579 tRNA synthetases class I (W and Y) C2U40_04515 PF00117 Glutamine amidotransferase class-I C2U40_04520 PF00202 Aminotransferase class-III C2U40_04525 PF04958 Arginine N-succinyltransferase beta subunit C2U40_04530 PF00171 Aldehyde dehydrogenase family C2U40_04540 PF13419 Haloacid dehalogenase-like hydrolase C2U40_04545 PF07690 Major Facilitator Superfamily C2U40_04550 PF10371 Domain of unknown function C2U40_04550 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C2U40_04550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C2U40_04550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U40_04550 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C2U40_04560 PF00128 Alpha amylase, catalytic domain C2U40_04560 PF16657 Maltogenic Amylase, C-terminal domain C2U40_04580 PF01048 Phosphorylase superfamily C2U40_04585 PF04973 Nicotinamide mononucleotide transporter C2U40_04590 PF03600 Citrate transporter C2U40_04590 PF02080 TrkA-C domain C2U40_04645 PF01381 Helix-turn-helix C2U40_04675 PF02190 ATP-dependent protease La (LON) substrate-binding domain C2U40_04675 PF05362 Lon protease (S16) C-terminal proteolytic domain C2U40_04675 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_04695 PF02384 N-6 DNA Methylase C2U40_04695 PF12161 HsdM N-terminal domain C2U40_04700 PF01420 Type I restriction modification DNA specificity domain C2U40_04710 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U40_04710 PF12008 Type I restriction and modification enzyme - subunit R C terminal C2U40_04710 PF18766 SWI2/SNF2 ATPase C2U40_04750 PF13356 Arm DNA-binding domain C2U40_04750 PF00589 Phage integrase family C2U40_04755 PF06071 Protein of unknown function (DUF933) C2U40_04755 PF01926 50S ribosome-binding GTPase C2U40_04760 PF01195 Peptidyl-tRNA hydrolase C2U40_04765 PF00149 Calcineurin-like phosphoesterase C2U40_04765 PF02872 5'-nucleotidase, C-terminal domain C2U40_04770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C2U40_04770 PF14572 Phosphoribosyl synthetase-associated domain C2U40_04780 PF00288 GHMP kinases N terminal domain C2U40_04780 PF08544 GHMP kinases C terminal C2U40_04785 PF03550 Outer membrane lipoprotein LolB C2U40_04790 PF01488 Shikimate / quinate 5-dehydrogenase C2U40_04790 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C2U40_04790 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C2U40_04795 PF00472 RF-1 domain C2U40_04795 PF03462 PCRF domain C2U40_04800 PF13847 Methyltransferase domain C2U40_04800 PF17827 PrmC N-terminal domain C2U40_04810 PF13369 Transglutaminase-like superfamily C2U40_04815 PF00793 DAHP synthetase I family C2U40_04820 PF00375 Sodium:dicarboxylate symporter family C2U40_04825 PF01228 Glycine radical C2U40_04830 PF03167 Uracil DNA glycosylase superfamily C2U40_04845 PF00923 Transaldolase/Fructose-6-phosphate aldolase C2U40_04850 PF01235 Sodium:alanine symporter family C2U40_04855 PF11992 Domain of unknown function (DUF3488) C2U40_04855 PF01841 Transglutaminase-like superfamily C2U40_04855 PF13559 Domain of unknown function (DUF4129) C2U40_04865 PF07726 ATPase family associated with various cellular activities (AAA) C2U40_04865 PF17863 AAA lid domain C2U40_04870 PF00144 Beta-lactamase C2U40_04875 PF00854 POT family C2U40_04880 PF03652 Holliday junction resolvase C2U40_04885 PF02622 Uncharacterized ACR, COG1678 C2U40_04890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_04890 PF12729 Four helix bundle sensory module for signal transduction C2U40_04890 PF00672 HAMP domain C2U40_04895 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C2U40_04895 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C2U40_04900 PF04452 RNA methyltransferase C2U40_04905 PF04231 Endonuclease I C2U40_04910 PF10263 SprT-like family C2U40_04915 PF02772 S-adenosylmethionine synthetase, central domain C2U40_04915 PF02773 S-adenosylmethionine synthetase, C-terminal domain C2U40_04915 PF00438 S-adenosylmethionine synthetase, N-terminal domain C2U40_04920 PF00456 Transketolase, thiamine diphosphate binding domain C2U40_04920 PF02780 Transketolase, C-terminal domain C2U40_04920 PF02779 Transketolase, pyrimidine binding domain C2U40_04925 PF01042 Endoribonuclease L-PSP C2U40_04935 PF01965 DJ-1/PfpI family C2U40_04940 PF03702 Anhydro-N-acetylmuramic acid kinase C2U40_04945 PF08525 Opacity-associated protein A N-terminal motif C2U40_04945 PF01551 Peptidase family M23 C2U40_04945 PF01476 LysM domain C2U40_04950 PF00579 tRNA synthetases class I (W and Y) C2U40_04955 PF01204 Trehalase C2U40_04965 PF01161 Phosphatidylethanolamine-binding protein C2U40_04975 PF03466 LysR substrate binding domain C2U40_04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_04985 PF00155 Aminotransferase class I and II C2U40_04990 PF07690 Major Facilitator Superfamily C2U40_04995 PF03466 LysR substrate binding domain C2U40_04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_05000 PF00106 short chain dehydrogenase C2U40_05005 PF01343 Peptidase family S49 C2U40_05005 PF08496 Peptidase family S49 N-terminal C2U40_05010 PF04996 Succinylarginine dihydrolase C2U40_05015 PF01396 Topoisomerase DNA binding C4 zinc finger C2U40_05015 PF08272 Topoisomerase I zinc-ribbon-like C2U40_05015 PF01751 Toprim domain C2U40_05015 PF01131 DNA topoisomerase C2U40_05030 PF08447 PAS fold C2U40_05030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_05035 PF02838 Glycosyl hydrolase family 20, domain 2 C2U40_05035 PF00728 Glycosyl hydrolase family 20, catalytic domain C2U40_05040 PF01869 BadF/BadG/BcrA/BcrD ATPase family C2U40_05050 PF00005 ABC transporter C2U40_05050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_05055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_05055 PF00005 ABC transporter C2U40_05060 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_05060 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U40_05065 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_05070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_05075 PF00072 Response regulator receiver domain C2U40_05075 PF00512 His Kinase A (phospho-acceptor) domain C2U40_05075 PF09308 LuxQ, periplasmic C2U40_05095 PF10725 Protein of unknown function (DUF2517) C2U40_05105 PF05114 Protein of unknown function (DUF692) C2U40_05125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_05125 PF08447 PAS fold C2U40_05125 PF13426 PAS domain C2U40_05140 PF04632 Fusaric acid resistance protein family C2U40_05145 PF03453 MoeA N-terminal region (domain I and II) C2U40_05145 PF03454 MoeA C-terminal region (domain IV) C2U40_05145 PF00994 Probable molybdopterin binding domain C2U40_05150 PF12804 MobA-like NTP transferase domain C2U40_05155 PF00005 ABC transporter C2U40_05160 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_05165 PF12849 PBP superfamily domain C2U40_05170 PF00072 Response regulator receiver domain C2U40_05170 PF00158 Sigma-54 interaction domain C2U40_05170 PF02954 Bacterial regulatory protein, Fis family C2U40_05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_05175 PF00512 His Kinase A (phospho-acceptor) domain C2U40_05175 PF00989 PAS fold C2U40_05180 PF12727 PBP superfamily domain C2U40_05180 PF12728 Helix-turn-helix domain C2U40_05185 PF02634 FdhD/NarQ family C2U40_05195 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_05195 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_05195 PF01610 Transposase C2U40_05200 PF00912 Transglycosylase C2U40_05230 PF00384 Molybdopterin oxidoreductase C2U40_05230 PF12838 4Fe-4S dicluster domain C2U40_05230 PF00384 Molybdopterin oxidoreductase C2U40_05230 PF01568 Molydopterin dinucleotide binding domain C2U40_05230 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2U40_05230 PF12838 4Fe-4S dicluster domain C2U40_05230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U40_05230 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2U40_05230 PF01568 Molydopterin dinucleotide binding domain C2U40_05230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U40_05235 PF13247 4Fe-4S dicluster domain C2U40_05245 PF00072 Response regulator receiver domain C2U40_05250 PF03949 Malic enzyme, NAD binding domain C2U40_05250 PF00390 Malic enzyme, N-terminal domain C2U40_05260 PF01458 Uncharacterized protein family (UPF0051) C2U40_05265 PF00860 Permease family C2U40_05270 PF10282 Lactonase, 7-bladed beta-propeller C2U40_05280 PF01610 Transposase C2U40_05280 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_05280 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_05285 PF00924 Mechanosensitive ion channel C2U40_05285 PF12795 Mechanosensitive ion channel porin domain C2U40_05285 PF12794 Mechanosensitive ion channel inner membrane domain 1 C2U40_05290 PF00224 Pyruvate kinase, barrel domain C2U40_05290 PF02887 Pyruvate kinase, alpha/beta domain C2U40_05300 PF04151 Bacterial pre-peptidase C-terminal domain C2U40_05300 PF04389 Peptidase family M28 C2U40_05305 PF00999 Sodium/hydrogen exchanger family C2U40_05305 PF02254 TrkA-N domain C2U40_05315 PF04381 Putative exonuclease, RdgC C2U40_05325 PF00149 Calcineurin-like phosphoesterase C2U40_05325 PF12320 Type 5 capsule protein repressor C-terminal domain C2U40_05330 PF13476 AAA domain C2U40_05345 PF01292 Prokaryotic cytochrome b561 C2U40_05355 PF00990 Diguanylate cyclase, GGDEF domain C2U40_05355 PF00072 Response regulator receiver domain C2U40_05360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U40_05365 PF02896 PEP-utilising enzyme, TIM barrel domain C2U40_05365 PF00391 PEP-utilising enzyme, mobile domain C2U40_05365 PF05524 PEP-utilising enzyme, N-terminal C2U40_05370 PF00381 PTS HPr component phosphorylation site C2U40_05375 PF00291 Pyridoxal-phosphate dependent enzyme C2U40_05380 PF10431 C-terminal, D2-small domain, of ClpB protein C2U40_05380 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_05380 PF07724 AAA domain (Cdc48 subfamily) C2U40_05380 PF17871 AAA lid domain C2U40_05380 PF02861 Clp amino terminal domain, pathogenicity island component C2U40_05390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2U40_05390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2U40_05395 PF01980 tRNA-methyltransferase O C2U40_05395 PF18389 TrmO C-terminal domain C2U40_05415 PF00005 ABC transporter C2U40_05415 PF00664 ABC transporter transmembrane region C2U40_05420 PF00664 ABC transporter transmembrane region C2U40_05420 PF00005 ABC transporter C2U40_05435 PF00486 Transcriptional regulatory protein, C terminal C2U40_05435 PF00072 Response regulator receiver domain C2U40_05445 PF03737 Aldolase/RraA C2U40_05460 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C2U40_05465 PF00588 SpoU rRNA Methylase family C2U40_05475 PF13840 ACT domain C2U40_05475 PF01842 ACT domain C2U40_05475 PF00696 Amino acid kinase family C2U40_05475 PF00742 Homoserine dehydrogenase C2U40_05475 PF03447 Homoserine dehydrogenase, NAD binding domain C2U40_05480 PF08544 GHMP kinases C terminal C2U40_05480 PF00288 GHMP kinases N terminal domain C2U40_05485 PF00291 Pyridoxal-phosphate dependent enzyme C2U40_05485 PF14821 Threonine synthase N terminus C2U40_05520 PF01048 Phosphorylase superfamily C2U40_05535 PF00512 His Kinase A (phospho-acceptor) domain C2U40_05535 PF01627 Hpt domain C2U40_05535 PF00989 PAS fold C2U40_05535 PF00072 Response regulator receiver domain C2U40_05535 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_05540 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C2U40_05545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U40_05545 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U40_05550 PF02690 Na+/Pi-cotransporter C2U40_05560 PF13520 Amino acid permease C2U40_05570 PF01610 Transposase C2U40_05570 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_05570 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_05575 PF00324 Amino acid permease C2U40_05580 PF00202 Aminotransferase class-III C2U40_05585 PF00171 Aldehyde dehydrogenase family C2U40_05590 PF07883 Cupin domain C2U40_05590 PF01381 Helix-turn-helix C2U40_05595 PF01266 FAD dependent oxidoreductase C2U40_05610 PF00816 H-NS histone family C2U40_05615 PF00793 DAHP synthetase I family C2U40_05625 PF08021 Siderophore-interacting FAD-binding domain C2U40_05625 PF04954 Siderophore-interacting protein C2U40_05630 PF02321 Outer membrane efflux protein C2U40_05635 PF00005 ABC transporter C2U40_05635 PF02687 FtsX-like permease family C2U40_05635 PF12704 MacB-like periplasmic core domain C2U40_05640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_05650 PF01368 DHH family C2U40_05650 PF02833 DHHA2 domain C2U40_05660 PF02463 RecF/RecN/SMC N terminal domain C2U40_05665 PF01513 ATP-NAD kinase C2U40_05670 PF01025 GrpE C2U40_05675 PF00012 Hsp70 protein C2U40_05680 PF01556 DnaJ C terminal domain C2U40_05680 PF00226 DnaJ domain C2U40_05680 PF00684 DnaJ central domain C2U40_05685 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_05685 PF01610 Transposase C2U40_05685 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_05690 PF02264 LamB porin C2U40_05690 PF11471 Maltoporin periplasmic N-terminal extension C2U40_05695 PF00294 pfkB family carbohydrate kinase C2U40_05700 PF02378 Phosphotransferase system, EIIC C2U40_05700 PF00367 phosphotransferase system, EIIB C2U40_05705 PF00251 Glycosyl hydrolases family 32 N-terminal domain C2U40_05705 PF08244 Glycosyl hydrolases family 32 C terminal C2U40_05715 PF02308 MgtC family C2U40_05730 PF01022 Bacterial regulatory protein, arsR family C2U40_05735 PF04143 Sulphur transport C2U40_05750 PF00873 AcrB/AcrD/AcrF family C2U40_05755 PF00563 EAL domain C2U40_05755 PF00990 Diguanylate cyclase, GGDEF domain C2U40_05755 PF03707 Bacterial signalling protein N terminal repeat C2U40_05760 PF10437 Bacterial lipoate protein ligase C-terminus C2U40_05760 PF03099 Biotin/lipoate A/B protein ligase family C2U40_05780 PF00873 AcrB/AcrD/AcrF family C2U40_05785 PF00529 HlyD membrane-fusion protein of T1SS C2U40_05785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_05795 PF00873 AcrB/AcrD/AcrF family C2U40_05800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_05805 PF03372 Endonuclease/Exonuclease/phosphatase family C2U40_05820 PF07690 Major Facilitator Superfamily C2U40_05830 PF01610 Transposase C2U40_05830 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_05830 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_05835 PF02424 ApbE family C2U40_05840 PF00127 Copper binding proteins, plastocyanin/azurin family C2U40_05855 PF01156 Inosine-uridine preferring nucleoside hydrolase C2U40_05865 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2U40_05865 PF00034 Cytochrome c C2U40_05875 PF06481 COX Aromatic Rich Motif C2U40_05875 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C2U40_05880 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2U40_05885 PF00510 Cytochrome c oxidase subunit III C2U40_05890 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C2U40_05895 PF01040 UbiA prenyltransferase family C2U40_05900 PF07690 Major Facilitator Superfamily C2U40_05910 PF01627 Hpt domain C2U40_05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_05910 PF00512 His Kinase A (phospho-acceptor) domain C2U40_05910 PF00072 Response regulator receiver domain C2U40_05910 PF00672 HAMP domain C2U40_05915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U40_05925 PF00072 Response regulator receiver domain C2U40_05925 PF00486 Transcriptional regulatory protein, C terminal C2U40_05930 PF03264 NapC/NirT cytochrome c family, N-terminal region C2U40_05935 PF00384 Molybdopterin oxidoreductase C2U40_05935 PF01568 Molydopterin dinucleotide binding domain C2U40_05935 PF18364 Molybdopterin oxidoreductase N-terminal domain C2U40_05940 PF02613 Nitrate reductase delta subunit C2U40_05980 PF04002 RadC-like JAB domain C2U40_06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_06020 PF03466 LysR substrate binding domain C2U40_06035 PF00696 Amino acid kinase family C2U40_06040 PF06545 Protein of unknown function (DUF1116) C2U40_06045 PF00549 CoA-ligase C2U40_06045 PF02629 CoA binding domain C2U40_06050 PF00857 Isochorismatase family C2U40_06065 PF05930 Prophage CP4-57 regulatory protein (AlpA) C2U40_06095 PF01773 Na+ dependent nucleoside transporter N-terminus C2U40_06095 PF07662 Na+ dependent nucleoside transporter C-terminus C2U40_06095 PF07670 Nucleoside recognition C2U40_06115 PF07804 HipA-like C-terminal domain C2U40_06115 PF13657 HipA N-terminal domain C2U40_06120 PF01381 Helix-turn-helix C2U40_06125 PF04307 LexA-binding, inner membrane-associated putative hydrolase C2U40_06140 PF05598 Transposase domain (DUF772) C2U40_06140 PF01609 Transposase DDE domain C2U40_06150 PF00290 Tryptophan synthase alpha chain C2U40_06155 PF00291 Pyridoxal-phosphate dependent enzyme C2U40_06160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C2U40_06160 PF00218 Indole-3-glycerol phosphate synthase C2U40_06165 PF02885 Glycosyl transferase family, helical bundle domain C2U40_06165 PF00591 Glycosyl transferase family, a/b domain C2U40_06170 PF00591 Glycosyl transferase family, a/b domain C2U40_06170 PF00117 Glutamine amidotransferase class-I C2U40_06170 PF02885 Glycosyl transferase family, helical bundle domain C2U40_06175 PF04715 Anthranilate synthase component I, N terminal region C2U40_06175 PF00425 chorismate binding enzyme C2U40_06180 PF02811 PHP domain C2U40_06185 PF01300 Telomere recombination C2U40_06190 PF02616 Segregation and condensation protein ScpA C2U40_06195 PF04079 Segregation and condensation complex subunit ScpB C2U40_06200 PF00849 RNA pseudouridylate synthase C2U40_06200 PF01479 S4 domain C2U40_06220 PF08361 MAATS-type transcriptional repressor, C-terminal region C2U40_06220 PF00440 Bacterial regulatory proteins, tetR family C2U40_06225 PF00529 HlyD membrane-fusion protein of T1SS C2U40_06225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_06230 PF00873 AcrB/AcrD/AcrF family C2U40_06235 PF02321 Outer membrane efflux protein C2U40_06240 PF16363 GDP-mannose 4,6 dehydratase C2U40_06245 PF00483 Nucleotidyl transferase C2U40_06250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2U40_06260 PF00551 Formyl transferase C2U40_06270 PF00535 Glycosyl transferase family 2 C2U40_06285 PF00733 Asparagine synthase C2U40_06285 PF13537 Glutamine amidotransferase domain C2U40_06295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2U40_06295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2U40_06295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2U40_06300 PF01370 NAD dependent epimerase/dehydratase family C2U40_06310 PF01370 NAD dependent epimerase/dehydratase family C2U40_06315 PF02397 Bacterial sugar transferase C2U40_06320 PF02719 Polysaccharide biosynthesis protein C2U40_06325 PF16363 GDP-mannose 4,6 dehydratase C2U40_06330 PF04321 RmlD substrate binding domain C2U40_06340 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C2U40_06345 PF02706 Chain length determinant protein C2U40_06355 PF04337 Protein of unknown function, DUF480 C2U40_06360 PF00271 Helicase conserved C-terminal domain C2U40_06360 PF00176 SNF2 family N-terminal domain C2U40_06360 PF04434 SWIM zinc finger C2U40_06365 PF05472 DNA replication terminus site-binding protein (Ter protein) C2U40_06375 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C2U40_06380 PF00676 Dehydrogenase E1 component C2U40_06385 PF02780 Transketolase, C-terminal domain C2U40_06385 PF02779 Transketolase, pyrimidine binding domain C2U40_06390 PF00364 Biotin-requiring enzyme C2U40_06390 PF02817 e3 binding domain C2U40_06390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U40_06395 PF00313 'Cold-shock' DNA-binding domain C2U40_06420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_06425 PF00892 EamA-like transporter family C2U40_06430 PF08220 DeoR-like helix-turn-helix domain C2U40_06430 PF00455 DeoR C terminal sensor domain C2U40_06440 PF04055 Radical SAM superfamily C2U40_06445 PF00923 Transaldolase/Fructose-6-phosphate aldolase C2U40_06455 PF11871 Domain of unknown function (DUF3391) C2U40_06455 PF01966 HD domain C2U40_06460 PF01479 S4 domain C2U40_06460 PF00849 RNA pseudouridylate synthase C2U40_06470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_06475 PF12850 Calcineurin-like phosphoesterase superfamily domain C2U40_06490 PF13144 Chaperone for flagella basal body P-ring formation C2U40_06495 PF00072 Response regulator receiver domain C2U40_06495 PF01584 CheW-like domain C2U40_06500 PF03705 CheR methyltransferase, all-alpha domain C2U40_06500 PF01739 CheR methyltransferase, SAM binding domain C2U40_06505 PF00460 Flagella basal body rod protein C2U40_06510 PF00460 Flagella basal body rod protein C2U40_06510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_06520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_06520 PF07559 Flagellar basal body protein FlaE C2U40_06520 PF00460 Flagella basal body rod protein C2U40_06525 PF00460 Flagella basal body rod protein C2U40_06525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_06530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_06530 PF00460 Flagella basal body rod protein C2U40_06535 PF02107 Flagellar L-ring protein C2U40_06540 PF02119 Flagellar P-ring protein C2U40_06545 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C2U40_06545 PF10135 Rod binding protein C2U40_06550 PF00460 Flagella basal body rod protein C2U40_06550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_06555 PF00669 Bacterial flagellin N-terminal helical region C2U40_06560 PF01769 Divalent cation transporter C2U40_06560 PF03448 MgtE intracellular N domain C2U40_06560 PF00571 CBS domain C2U40_06565 PF11849 Domain of unknown function (DUF3369) C2U40_06570 PF09317 Domain of unknown function (DUF1974) C2U40_06570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U40_06570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U40_06570 PF02770 Acyl-CoA dehydrogenase, middle domain C2U40_06575 PF13580 SIS domain C2U40_06580 PF13230 Glutamine amidotransferases class-II C2U40_06590 PF01933 Uncharacterised protein family UPF0052 C2U40_06600 PF00072 Response regulator receiver domain C2U40_06600 PF00512 His Kinase A (phospho-acceptor) domain C2U40_06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_06600 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U40_06610 PF00072 Response regulator receiver domain C2U40_06610 PF00196 Bacterial regulatory proteins, luxR family C2U40_06615 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C2U40_06615 PF00672 HAMP domain C2U40_06615 PF07730 Histidine kinase C2U40_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_06620 PF04055 Radical SAM superfamily C2U40_06620 PF06463 Molybdenum Cofactor Synthesis C C2U40_06625 PF00037 4Fe-4S binding domain C2U40_06625 PF12800 4Fe-4S binding domain C2U40_06625 PF13187 4Fe-4S dicluster domain C2U40_06635 PF00384 Molybdopterin oxidoreductase C2U40_06635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U40_06635 PF10518 TAT (twin-arginine translocation) pathway signal sequence C2U40_06635 PF01568 Molydopterin dinucleotide binding domain C2U40_06640 PF12838 4Fe-4S dicluster domain C2U40_06640 PF12800 4Fe-4S binding domain C2U40_06645 PF12801 4Fe-4S binding domain C2U40_06645 PF13237 4Fe-4S dicluster domain C2U40_06650 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C2U40_06655 PF03264 NapC/NirT cytochrome c family, N-terminal region C2U40_06660 PF00994 Probable molybdopterin binding domain C2U40_06665 PF01967 MoaC family C2U40_06670 PF02597 ThiS family C2U40_06675 PF02391 MoaE protein C2U40_06685 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_06690 PF00005 ABC transporter C2U40_06690 PF03459 TOBE domain C2U40_06695 PF00561 alpha/beta hydrolase fold C2U40_06700 PF06406 StbA protein C2U40_06710 PF06291 Bor protein C2U40_06715 PF06291 Bor protein C2U40_06720 PF05872 Bacterial protein of unknown function (DUF853) C2U40_06740 PF01610 Transposase C2U40_06740 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_06740 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_06750 PF00005 ABC transporter C2U40_06750 PF00664 ABC transporter transmembrane region C2U40_06755 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C2U40_06760 PF03966 Trm112p-like protein C2U40_06765 PF02348 Cytidylyltransferase C2U40_06770 PF00072 Response regulator receiver domain C2U40_06770 PF00196 Bacterial regulatory proteins, luxR family C2U40_06775 PF01541 GIY-YIG catalytic domain C2U40_06775 PF08459 UvrC Helix-hairpin-helix N-terminal C2U40_06775 PF02151 UvrB/uvrC motif C2U40_06780 PF01066 CDP-alcohol phosphatidyltransferase C2U40_06805 PF08447 PAS fold C2U40_06805 PF13426 PAS domain C2U40_06805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_06810 PF00672 HAMP domain C2U40_06810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_06815 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB C2U40_06820 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C2U40_06840 PF13247 4Fe-4S dicluster domain C2U40_06840 PF00037 4Fe-4S binding domain C2U40_06845 PF03916 Polysulphide reductase, NrfD C2U40_06850 PF00149 Calcineurin-like phosphoesterase C2U40_06860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2U40_06865 PF01406 tRNA synthetases class I (C) catalytic domain C2U40_06865 PF09190 DALR domain C2U40_06880 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_06880 PF01610 Transposase C2U40_06880 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_06890 PF13185 GAF domain C2U40_06890 PF00990 Diguanylate cyclase, GGDEF domain C2U40_06920 PF01169 Uncharacterized protein family UPF0016 C2U40_06925 PF01253 Translation initiation factor SUI1 C2U40_06935 PF07670 Nucleoside recognition C2U40_06935 PF02421 Ferrous iron transport protein B C2U40_06935 PF07664 Ferrous iron transport protein B C terminus C2U40_06950 PF00483 Nucleotidyl transferase C2U40_06955 PF00437 Type II/IV secretion system protein C2U40_06965 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_06965 PF00072 Response regulator receiver domain C2U40_06965 PF00989 PAS fold C2U40_06965 PF00512 His Kinase A (phospho-acceptor) domain C2U40_06965 PF01627 Hpt domain C2U40_06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_06970 PF01032 FecCD transport family C2U40_06975 PF00005 ABC transporter C2U40_06980 PF00583 Acetyltransferase (GNAT) family C2U40_06985 PF00793 DAHP synthetase I family C2U40_06990 PF01219 Prokaryotic diacylglycerol kinase C2U40_06995 PF01842 ACT domain C2U40_06995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U40_06995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U40_07000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C2U40_07005 PF01812 5-formyltetrahydrofolate cyclo-ligase family C2U40_07015 PF01113 Dihydrodipicolinate reductase, N-terminus C2U40_07015 PF05173 Dihydrodipicolinate reductase, C-terminus C2U40_07020 PF00117 Glutamine amidotransferase class-I C2U40_07020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C2U40_07025 PF02142 MGS-like domain C2U40_07025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U40_07025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2U40_07030 PF00682 HMGL-like C2U40_07030 PF08502 LeuA allosteric (dimerisation) domain C2U40_07035 PF07759 Protein of unknown function (DUF1615) C2U40_07040 PF08378 Nuclease-related domain C2U40_07060 PF13302 Acetyltransferase (GNAT) domain C2U40_07065 PF00270 DEAD/DEAH box helicase C2U40_07065 PF00271 Helicase conserved C-terminal domain C2U40_07075 PF14521 Lysine-specific metallo-endopeptidase C2U40_07090 PF00376 MerR family regulatory protein C2U40_07090 PF09278 MerR, DNA binding C2U40_07105 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_07110 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_07120 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_07120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C2U40_07125 PF00310 Glutamine amidotransferases class-II C2U40_07125 PF04898 Glutamate synthase central domain C2U40_07125 PF01645 Conserved region in glutamate synthase C2U40_07125 PF01493 GXGXG motif C2U40_07130 PF04055 Radical SAM superfamily C2U40_07130 PF16199 Radical_SAM C-terminal domain C2U40_07135 PF00005 ABC transporter C2U40_07135 PF00664 ABC transporter transmembrane region C2U40_07135 PF03412 Peptidase C39 family C2U40_07190 PF00324 Amino acid permease C2U40_07200 PF03618 Kinase/pyrophosphorylase C2U40_07205 PF00391 PEP-utilising enzyme, mobile domain C2U40_07205 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C2U40_07205 PF02896 PEP-utilising enzyme, TIM barrel domain C2U40_07215 PF00933 Glycosyl hydrolase family 3 N terminal domain C2U40_07215 PF14310 Fibronectin type III-like domain C2U40_07215 PF01915 Glycosyl hydrolase family 3 C-terminal domain C2U40_07225 PF00082 Subtilase family C2U40_07225 PF01483 Proprotein convertase P-domain C2U40_07245 PF03180 NLPA lipoprotein C2U40_07250 PF01569 PAP2 superfamily C2U40_07255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U40_07255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U40_07255 PF11890 Domain of unknown function (DUF3410) C2U40_07260 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U40_07260 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U40_07270 PF01416 tRNA pseudouridine synthase C2U40_07275 PF01039 Carboxyl transferase domain C2U40_07275 PF17848 Acetyl-coA carboxylase zinc finger domain C2U40_07280 PF02875 Mur ligase family, glutamate ligase domain C2U40_07280 PF08245 Mur ligase middle domain C2U40_07285 PF05036 Sporulation related domain C2U40_07290 PF04358 DsrC like protein C2U40_07295 PF12805 FUSC-like inner membrane protein yccS C2U40_07300 PF01027 Inhibitor of apoptosis-promoting Bax1 C2U40_07315 PF01312 FlhB HrpN YscU SpaS Family C2U40_07320 PF01311 Bacterial export proteins, family 1 C2U40_07325 PF01313 Bacterial export proteins, family 3 C2U40_07330 PF00813 FliP family C2U40_07335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U40_07340 PF02120 Flagellar hook-length control protein FliK C2U40_07350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U40_07350 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2U40_07350 PF18269 T3SS EscN ATPase C-terminal domain C2U40_07355 PF07201 HrpJ-like domain C2U40_07360 PF09059 TyeA C2U40_07370 PF09474 Type III secretion system YscX (type_III_YscX) C2U40_07380 PF00771 FHIPEP family C2U40_07385 PF09621 Type III secretion system regulator (LcrR) C2U40_07395 PF04792 V antigen (LcrV) protein C2U40_07400 PF07720 Tetratricopeptide repeat C2U40_07405 PF04888 Secretion system effector C (SseC) like family C2U40_07410 PF05844 YopD protein C2U40_07415 PF05932 Tir chaperone protein (CesT) family C2U40_07430 PF12833 Helix-turn-helix domain C2U40_07450 PF16697 Inner membrane component of T3SS, cytoplasmic domain C2U40_07450 PF16693 Inner membrane component of T3SS, periplasmic domain C2U40_07460 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF C2U40_07465 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) C2U40_07470 PF09025 YopR, type III needle-polymerisation regulator C2U40_07475 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI C2U40_07480 PF01514 Secretory protein of YscJ/FliF family C2U40_07490 PF02108 Flagellar assembly protein FliH C2U40_07505 PF00884 Sulfatase C2U40_07505 PF08019 Phosphoethanolamine transferase EptA/EptB C2U40_07515 PF03706 Lysylphosphatidylglycerol synthase TM region C2U40_07515 PF09924 Uncharacterised conserved protein (DUF2156) C2U40_07525 PF08447 PAS fold C2U40_07525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_07530 PF13426 PAS domain C2U40_07530 PF00990 Diguanylate cyclase, GGDEF domain C2U40_07530 PF00563 EAL domain C2U40_07535 PF00849 RNA pseudouridylate synthase C2U40_07545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U40_07550 PF04209 homogentisate 1,2-dioxygenase C2U40_07555 PF01610 Transposase C2U40_07555 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_07555 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_07565 PF14497 Glutathione S-transferase, C-terminal domain C2U40_07565 PF02798 Glutathione S-transferase, N-terminal domain C2U40_07570 PF00043 Glutathione S-transferase, C-terminal domain C2U40_07570 PF13417 Glutathione S-transferase, N-terminal domain C2U40_07580 PF13537 Glutamine amidotransferase domain C2U40_07580 PF00733 Asparagine synthase C2U40_07590 PF02254 TrkA-N domain C2U40_07590 PF00999 Sodium/hydrogen exchanger family C2U40_07595 PF13344 Haloacid dehalogenase-like hydrolase C2U40_07605 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_07605 PF01610 Transposase C2U40_07605 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_07610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U40_07615 PF03471 Transporter associated domain C2U40_07615 PF03741 Integral membrane protein TerC family C2U40_07625 PF13183 4Fe-4S dicluster domain C2U40_07625 PF01565 FAD binding domain C2U40_07625 PF02913 FAD linked oxidases, C-terminal domain C2U40_07635 PF03061 Thioesterase superfamily C2U40_07640 PF03880 DbpA RNA binding domain C2U40_07640 PF00270 DEAD/DEAH box helicase C2U40_07640 PF00271 Helicase conserved C-terminal domain C2U40_07645 PF03553 Na+/H+ antiporter family C2U40_07645 PF13726 Na+-H+ antiporter family C2U40_07650 PF00929 Exonuclease C2U40_07655 PF12729 Four helix bundle sensory module for signal transduction C2U40_07655 PF00672 HAMP domain C2U40_07655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_07660 PF00691 OmpA family C2U40_07660 PF18393 MotY N-terminal domain C2U40_07665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U40_07670 PF10576 Iron-sulfur binding domain of endonuclease III C2U40_07670 PF00633 Helix-hairpin-helix motif C2U40_07670 PF00730 HhH-GPD superfamily base excision DNA repair protein C2U40_07675 PF02508 Rnf-Nqr subunit, membrane protein C2U40_07680 PF04205 FMN-binding domain C2U40_07685 PF03116 NQR2, RnfD, RnfE family C2U40_07690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C2U40_07690 PF12838 4Fe-4S dicluster domain C2U40_07690 PF13375 RnfC Barrel sandwich hybrid domain C2U40_07690 PF10531 SLBB domain C2U40_07695 PF04060 Putative Fe-S cluster C2U40_07700 PF02508 Rnf-Nqr subunit, membrane protein C2U40_07705 PF00892 EamA-like transporter family C2U40_07715 PF08447 PAS fold C2U40_07715 PF13426 PAS domain C2U40_07715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_07725 PF07055 Enoyl reductase FAD binding domain C2U40_07725 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C2U40_07725 PF12241 Trans-2-enoyl-CoA reductase catalytic region C2U40_07730 PF03606 C4-dicarboxylate anaerobic carrier C2U40_07735 PF00155 Aminotransferase class I and II C2U40_07745 PF00462 Glutaredoxin C2U40_07750 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C2U40_07755 PF00271 Helicase conserved C-terminal domain C2U40_07755 PF04851 Type III restriction enzyme, res subunit C2U40_07760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_07760 PF00529 HlyD membrane-fusion protein of T1SS C2U40_07765 PF11742 Protein of unknown function (DUF3302) C2U40_07770 PF02554 Carbon starvation protein CstA C2U40_07775 PF00072 Response regulator receiver domain C2U40_07775 PF04397 LytTr DNA-binding domain C2U40_07780 PF06580 Histidine kinase C2U40_07780 PF07694 5TMR of 5TMR-LYT C2U40_07785 PF01966 HD domain C2U40_07790 PF00171 Aldehyde dehydrogenase family C2U40_07790 PF00465 Iron-containing alcohol dehydrogenase C2U40_07800 PF01914 MarC family integral membrane protein C2U40_07805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_07810 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_07815 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_07815 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U40_07820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_07820 PF00005 ABC transporter C2U40_07825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_07825 PF00005 ABC transporter C2U40_07830 PF03741 Integral membrane protein TerC family C2U40_07835 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_07835 PF01610 Transposase C2U40_07835 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_07840 PF00842 Alanine racemase, C-terminal domain C2U40_07840 PF01168 Alanine racemase, N-terminal domain C2U40_07850 PF00375 Sodium:dicarboxylate symporter family C2U40_07865 PF01979 Amidohydrolase family C2U40_07875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_07875 PF00672 HAMP domain C2U40_07880 PF01230 HIT domain C2U40_07915 PF02355 Protein export membrane protein C2U40_07915 PF13721 SecD export protein N-terminal TM region C2U40_07915 PF07549 SecD/SecF GG Motif C2U40_07920 PF07549 SecD/SecF GG Motif C2U40_07920 PF02355 Protein export membrane protein C2U40_07930 PF05661 Protein of unknown function (DUF808) C2U40_07935 PF01432 Peptidase family M3 C2U40_07935 PF08439 Oligopeptidase F C2U40_07940 PF08439 Oligopeptidase F C2U40_07940 PF01432 Peptidase family M3 C2U40_07945 PF00860 Permease family C2U40_07950 PF05728 Uncharacterised protein family (UPF0227) C2U40_07955 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_07975 PF01906 Putative heavy-metal-binding C2U40_07985 PF01734 Patatin-like phospholipase C2U40_07990 PF17676 LD-carboxypeptidase C-terminal domain C2U40_07990 PF02016 LD-carboxypeptidase N-terminal domain C2U40_07995 PF00884 Sulfatase C2U40_08005 PF01842 ACT domain C2U40_08005 PF00696 Amino acid kinase family C2U40_08010 PF00583 Acetyltransferase (GNAT) family C2U40_08010 PF00696 Amino acid kinase family C2U40_08015 PF01625 Peptide methionine sulfoxide reductase C2U40_08040 PF00561 alpha/beta hydrolase fold C2U40_08045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U40_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_08055 PF03466 LysR substrate binding domain C2U40_08060 PF02652 L-lactate permease C2U40_08065 PF02754 Cysteine-rich domain C2U40_08070 PF13183 4Fe-4S dicluster domain C2U40_08070 PF02589 LUD domain C2U40_08070 PF11870 Domain of unknown function (DUF3390) C2U40_08075 PF02589 LUD domain C2U40_08080 PF02913 FAD linked oxidases, C-terminal domain C2U40_08080 PF01565 FAD binding domain C2U40_08105 PF00005 ABC transporter C2U40_08115 PF07690 Major Facilitator Superfamily C2U40_08130 PF01593 Flavin containing amine oxidoreductase C2U40_08135 PF03239 Iron permease FTR1 family C2U40_08150 PF03350 Uncharacterized protein family, UPF0114 C2U40_08165 PF01740 STAS domain C2U40_08165 PF00916 Sulfate permease family C2U40_08190 PF01168 Alanine racemase, N-terminal domain C2U40_08190 PF00842 Alanine racemase, C-terminal domain C2U40_08195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_08195 PF12729 Four helix bundle sensory module for signal transduction C2U40_08195 PF00672 HAMP domain C2U40_08200 PF00563 EAL domain C2U40_08200 PF00990 Diguanylate cyclase, GGDEF domain C2U40_08200 PF03707 Bacterial signalling protein N terminal repeat C2U40_08205 PF01339 CheB methylesterase C2U40_08205 PF00072 Response regulator receiver domain C2U40_08210 PF01739 CheR methyltransferase, SAM binding domain C2U40_08210 PF03705 CheR methyltransferase, all-alpha domain C2U40_08215 PF01584 CheW-like domain C2U40_08220 PF12729 Four helix bundle sensory module for signal transduction C2U40_08220 PF00672 HAMP domain C2U40_08220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_08225 PF01627 Hpt domain C2U40_08225 PF01584 CheW-like domain C2U40_08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_08225 PF02895 Signal transducing histidine kinase, homodimeric domain C2U40_08225 PF09078 CheY binding C2U40_08235 PF00072 Response regulator receiver domain C2U40_08240 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C2U40_08240 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2U40_08245 PF13247 4Fe-4S dicluster domain C2U40_08250 PF03916 Polysulphide reductase, NrfD C2U40_08255 PF00374 Nickel-dependent hydrogenase C2U40_08260 PF01750 Hydrogenase maturation protease C2U40_08265 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE C2U40_08270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_08275 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_08280 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U40_08280 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_08285 PF00005 ABC transporter C2U40_08285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_08290 PF00005 ABC transporter C2U40_08295 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2U40_08300 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C2U40_08305 PF02769 AIR synthase related protein, C-terminal domain C2U40_08305 PF00586 AIR synthase related protein, N-terminal domain C2U40_08310 PF01924 Hydrogenase formation hypA family C2U40_08315 PF01455 HupF/HypC family C2U40_08320 PF17788 HypF Kae1-like domain C2U40_08320 PF07503 HypF finger C2U40_08320 PF00708 Acylphosphatase C2U40_08320 PF01300 Telomere recombination C2U40_08325 PF09105 Elongation factor SelB, winged helix C2U40_08325 PF09106 Elongation factor SelB, winged helix C2U40_08325 PF09107 Elongation factor SelB, winged helix C2U40_08325 PF03144 Elongation factor Tu domain 2 C2U40_08325 PF00009 Elongation factor Tu GTP binding domain C2U40_08330 PF12390 Selenocysteine synthase N terminal C2U40_08330 PF03841 L-seryl-tRNA selenium transferase C2U40_08335 PF01750 Hydrogenase maturation protease C2U40_08340 PF07450 Formate hydrogenlyase maturation protein HycH C2U40_08345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2U40_08350 PF12838 4Fe-4S dicluster domain C2U40_08355 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C2U40_08355 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C2U40_08355 PF00374 Nickel-dependent hydrogenase C2U40_08360 PF00146 NADH dehydrogenase C2U40_08365 PF00361 Proton-conducting membrane transporter C2U40_08370 PF12798 4Fe-4S binding domain C2U40_08370 PF00037 4Fe-4S binding domain C2U40_08375 PF02705 K+ potassium transporter C2U40_08385 PF13247 4Fe-4S dicluster domain C2U40_08385 PF12800 4Fe-4S binding domain C2U40_08400 PF00158 Sigma-54 interaction domain C2U40_08400 PF02954 Bacterial regulatory protein, Fis family C2U40_08400 PF01590 GAF domain C2U40_08405 PF02634 FdhD/NarQ family C2U40_08410 PF02132 RecR protein C2U40_08410 PF13662 Toprim domain C2U40_08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_08420 PF00183 Hsp90 protein C2U40_08430 PF05191 Adenylate kinase, active site lid C2U40_08435 PF00762 Ferrochelatase C2U40_08445 PF00294 pfkB family carbohydrate kinase C2U40_08460 PF00990 Diguanylate cyclase, GGDEF domain C2U40_08460 PF03707 Bacterial signalling protein N terminal repeat C2U40_08460 PF00563 EAL domain C2U40_08465 PF00483 Nucleotidyl transferase C2U40_08475 PF07273 Protein of unknown function (DUF1439) C2U40_08480 PF00425 chorismate binding enzyme C2U40_08485 PF00501 AMP-binding enzyme C2U40_08485 PF13193 AMP-binding enzyme C-terminal domain C2U40_08490 PF00550 Phosphopantetheine attachment site C2U40_08490 PF00857 Isochorismatase family C2U40_08495 PF00550 Phosphopantetheine attachment site C2U40_08495 PF00668 Condensation domain C2U40_08495 PF13193 AMP-binding enzyme C-terminal domain C2U40_08495 PF00975 Thioesterase domain C2U40_08495 PF00501 AMP-binding enzyme C2U40_08505 PF13193 AMP-binding enzyme C-terminal domain C2U40_08505 PF00550 Phosphopantetheine attachment site C2U40_08505 PF00668 Condensation domain C2U40_08505 PF07993 Male sterility protein C2U40_08505 PF00501 AMP-binding enzyme C2U40_08510 PF00550 Phosphopantetheine attachment site C2U40_08510 PF00501 AMP-binding enzyme C2U40_08510 PF00975 Thioesterase domain C2U40_08510 PF13193 AMP-binding enzyme C-terminal domain C2U40_08510 PF00668 Condensation domain C2U40_08515 PF01497 Periplasmic binding protein C2U40_08520 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C2U40_08520 PF01648 4'-phosphopantetheinyl transferase superfamily C2U40_08525 PF00005 ABC transporter C2U40_08530 PF01032 FecCD transport family C2U40_08535 PF01032 FecCD transport family C2U40_08540 PF07715 TonB-dependent Receptor Plug Domain C2U40_08540 PF00593 TonB dependent receptor C2U40_08555 PF11143 Protein of unknown function (DUF2919) C2U40_08560 PF01544 CorA-like Mg2+ transporter protein C2U40_08570 PF01012 Electron transfer flavoprotein domain C2U40_08575 PF01012 Electron transfer flavoprotein domain C2U40_08575 PF00766 Electron transfer flavoprotein FAD-binding domain C2U40_08580 PF00266 Aminotransferase class-V C2U40_08585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2U40_08590 PF00793 DAHP synthetase I family C2U40_08595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_08595 PF00672 HAMP domain C2U40_08600 PF04055 Radical SAM superfamily C2U40_08605 PF02601 Exonuclease VII, large subunit C2U40_08605 PF13742 OB-fold nucleic acid binding domain C2U40_08610 PF00892 EamA-like transporter family C2U40_08615 PF02472 Biopolymer transport protein ExbD/TolR C2U40_08620 PF01618 MotA/TolQ/ExbB proton channel family C2U40_08630 PF02705 K+ potassium transporter C2U40_08635 PF00478 IMP dehydrogenase / GMP reductase domain C2U40_08635 PF00571 CBS domain C2U40_08640 PF00958 GMP synthase C terminal domain C2U40_08640 PF00117 Glutamine amidotransferase class-I C2U40_08640 PF02540 NAD synthase C2U40_08655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2U40_08655 PF02805 Metal binding domain of Ada C2U40_08655 PF12833 Helix-turn-helix domain C2U40_08655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2U40_08670 PF05724 Thiopurine S-methyltransferase (TPMT) C2U40_08675 PF00675 Insulinase (Peptidase family M16) C2U40_08675 PF05193 Peptidase M16 inactive domain C2U40_08680 PF00300 Histidine phosphatase superfamily (branch 1) C2U40_08690 PF00892 EamA-like transporter family C2U40_08695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_08700 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C2U40_08705 PF00271 Helicase conserved C-terminal domain C2U40_08705 PF17757 UvrB interaction domain C2U40_08705 PF02559 CarD-like/TRCF domain C2U40_08705 PF03461 TRCF domain C2U40_08705 PF00270 DEAD/DEAH box helicase C2U40_08715 PF12704 MacB-like periplasmic core domain C2U40_08715 PF02687 FtsX-like permease family C2U40_08720 PF00005 ABC transporter C2U40_08725 PF12704 MacB-like periplasmic core domain C2U40_08725 PF02687 FtsX-like permease family C2U40_08745 PF05698 Bacterial trigger factor protein (TF) C-terminus C2U40_08745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U40_08745 PF05697 Bacterial trigger factor protein (TF) C2U40_08750 PF00574 Clp protease C2U40_08755 PF07724 AAA domain (Cdc48 subfamily) C2U40_08755 PF06689 ClpX C4-type zinc finger C2U40_08755 PF10431 C-terminal, D2-small domain, of ClpB protein C2U40_08760 PF05362 Lon protease (S16) C-terminal proteolytic domain C2U40_08760 PF02190 ATP-dependent protease La (LON) substrate-binding domain C2U40_08760 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_08765 PF00216 Bacterial DNA-binding protein C2U40_08770 PF13145 PPIC-type PPIASE domain C2U40_08775 PF00005 ABC transporter C2U40_08775 PF12848 ABC transporter C2U40_08780 PF00474 Sodium:solute symporter family C2U40_08785 PF04341 Protein of unknown function, DUF485 C2U40_08800 PF00378 Enoyl-CoA hydratase/isomerase C2U40_08805 PF01235 Sodium:alanine symporter family C2U40_08815 PF06167 Glucose-regulated metallo-peptidase M90 C2U40_08820 PF01184 GPR1/FUN34/yaaH family C2U40_08835 PF09278 MerR, DNA binding C2U40_08835 PF00376 MerR family regulatory protein C2U40_08840 PF00682 HMGL-like C2U40_08845 PF00289 Biotin carboxylase, N-terminal domain C2U40_08845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U40_08845 PF02785 Biotin carboxylase C-terminal domain C2U40_08845 PF00364 Biotin-requiring enzyme C2U40_08850 PF00378 Enoyl-CoA hydratase/isomerase C2U40_08855 PF01039 Carboxyl transferase domain C2U40_08860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U40_08860 PF02770 Acyl-CoA dehydrogenase, middle domain C2U40_08860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U40_08865 PF00171 Aldehyde dehydrogenase family C2U40_08870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U40_08870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U40_08870 PF02770 Acyl-CoA dehydrogenase, middle domain C2U40_08875 PF00378 Enoyl-CoA hydratase/isomerase C2U40_08880 PF00378 Enoyl-CoA hydratase/isomerase C2U40_08885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C2U40_08885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C2U40_08895 PF13520 Amino acid permease C2U40_08900 PF01925 Sulfite exporter TauE/SafE C2U40_08940 PF03466 LysR substrate binding domain C2U40_08940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_08945 PF00232 Glycosyl hydrolase family 1 C2U40_08950 PF03707 Bacterial signalling protein N terminal repeat C2U40_08950 PF13188 PAS domain C2U40_08950 PF00990 Diguanylate cyclase, GGDEF domain C2U40_08950 PF00563 EAL domain C2U40_08960 PF01966 HD domain C2U40_08970 PF03466 LysR substrate binding domain C2U40_08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_08975 PF01261 Xylose isomerase-like TIM barrel C2U40_08980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U40_08980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2U40_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_08985 PF03466 LysR substrate binding domain C2U40_08995 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U40_09000 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U40_09015 PF17151 Periplasmic sensor domain C2U40_09015 PF00990 Diguanylate cyclase, GGDEF domain C2U40_09025 PF00136 DNA polymerase family B C2U40_09025 PF03104 DNA polymerase family B, exonuclease domain C2U40_09055 PF01554 MatE C2U40_09060 PF06786 Uncharacterised protein family (UPF0253) C2U40_09065 PF00677 Lumazine binding domain C2U40_09075 PF13419 Haloacid dehalogenase-like hydrolase C2U40_09080 PF01370 NAD dependent epimerase/dehydratase family C2U40_09080 PF02222 ATP-grasp domain C2U40_09085 PF00892 EamA-like transporter family C2U40_09090 PF02525 Flavodoxin-like fold C2U40_09115 PF17783 CvfB-like winged helix domain C2U40_09115 PF13509 S1 domain C2U40_09125 PF04269 Protein of unknown function, DUF440 C2U40_09130 PF00912 Transglycosylase C2U40_09135 PF04269 Protein of unknown function, DUF440 C2U40_09140 PF03776 Septum formation topological specificity factor MinE C2U40_09145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2U40_09150 PF03775 Septum formation inhibitor MinC, C-terminal domain C2U40_09150 PF05209 Septum formation inhibitor MinC, N-terminal domain C2U40_09155 PF05166 YcgL domain C2U40_09160 PF13406 Transglycosylase SLT domain C2U40_09165 PF03313 Serine dehydratase alpha chain C2U40_09165 PF03315 Serine dehydratase beta chain C2U40_09175 PF03313 Serine dehydratase alpha chain C2U40_09175 PF03315 Serine dehydratase beta chain C2U40_09180 PF06865 Pyrimidine/purine nucleoside phosphorylase C2U40_09185 PF00375 Sodium:dicarboxylate symporter family C2U40_09190 PF09278 MerR, DNA binding C2U40_09190 PF00376 MerR family regulatory protein C2U40_09195 PF02803 Thiolase, C-terminal domain C2U40_09195 PF00108 Thiolase, N-terminal domain C2U40_09200 PF08668 HDOD domain C2U40_09200 PF00563 EAL domain C2U40_09205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C2U40_09210 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C2U40_09220 PF04542 Sigma-70 region 2 C2U40_09220 PF08281 Sigma-70, region 4 C2U40_09245 PF01882 Protein of unknown function DUF58 C2U40_09250 PF17863 AAA lid domain C2U40_09250 PF07726 ATPase family associated with various cellular activities (AAA) C2U40_09255 PF02803 Thiolase, C-terminal domain C2U40_09255 PF00108 Thiolase, N-terminal domain C2U40_09260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C2U40_09260 PF00378 Enoyl-CoA hydratase/isomerase C2U40_09260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C2U40_09270 PF07152 YaeQ protein C2U40_09305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U40_09305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U40_09310 PF00291 Pyridoxal-phosphate dependent enzyme C2U40_09315 PF01546 Peptidase family M20/M25/M40 C2U40_09315 PF07687 Peptidase dimerisation domain C2U40_09320 PF01979 Amidohydrolase family C2U40_09325 PF00696 Amino acid kinase family C2U40_09330 PF00892 EamA-like transporter family C2U40_09335 PF13478 XdhC Rossmann domain C2U40_09335 PF02625 XdhC and CoxI family C2U40_09345 PF12804 MobA-like NTP transferase domain C2U40_09360 PF01526 Tn3 transposase DDE domain C2U40_09360 PF13700 Domain of unknown function (DUF4158) C2U40_09365 PF02417 Chromate transporter C2U40_09370 PF09828 Chromate resistance exported protein C2U40_09380 PF00589 Phage integrase family C2U40_09410 PF00440 Bacterial regulatory proteins, tetR family C2U40_09430 PF01625 Peptide methionine sulfoxide reductase C2U40_09435 PF00210 Ferritin-like domain C2U40_09455 PF02803 Thiolase, C-terminal domain C2U40_09455 PF00108 Thiolase, N-terminal domain C2U40_09460 PF00970 Oxidoreductase FAD-binding domain C2U40_09460 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U40_09460 PF00175 Oxidoreductase NAD-binding domain C2U40_09465 PF00174 Oxidoreductase molybdopterin binding domain C2U40_09470 PF00107 Zinc-binding dehydrogenase C2U40_09470 PF08240 Alcohol dehydrogenase GroES-like domain C2U40_09520 PF00043 Glutathione S-transferase, C-terminal domain C2U40_09520 PF02798 Glutathione S-transferase, N-terminal domain C2U40_09525 PF01625 Peptide methionine sulfoxide reductase C2U40_09530 PF01641 SelR domain C2U40_09535 PF03466 LysR substrate binding domain C2U40_09535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_09545 PF01625 Peptide methionine sulfoxide reductase C2U40_09560 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C2U40_09580 PF01047 MarR family C2U40_09585 PF03466 LysR substrate binding domain C2U40_09585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_09595 PF03743 Bacterial conjugation TrbI-like protein C2U40_09610 PF04610 TrbL/VirB6 plasmid conjugal transfer protein C2U40_09625 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C2U40_09640 PF00437 Type II/IV secretion system protein C2U40_09650 PF02534 Type IV secretory system Conjugative DNA transfer C2U40_09660 PF01464 Transglycosylase SLT domain C2U40_09680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_09680 PF08447 PAS fold C2U40_09690 PF00239 Resolvase, N terminal domain C2U40_09690 PF02796 Helix-turn-helix domain of resolvase C2U40_09695 PF01526 Tn3 transposase DDE domain C2U40_09695 PF13700 Domain of unknown function (DUF4158) C2U40_09705 PF01979 Amidohydrolase family C2U40_09710 PF00941 FAD binding domain in molybdopterin dehydrogenase C2U40_09715 PF01799 [2Fe-2S] binding domain C2U40_09715 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C2U40_09715 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C2U40_09720 PF00860 Permease family C2U40_09725 PF01979 Amidohydrolase family C2U40_09730 PF00860 Permease family C2U40_09735 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C2U40_09735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C2U40_09740 PF03450 CO dehydrogenase flavoprotein C-terminal domain C2U40_09740 PF00941 FAD binding domain in molybdopterin dehydrogenase C2U40_09745 PF01799 [2Fe-2S] binding domain C2U40_09745 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U40_09755 PF05433 Glycine zipper 2TM domain C2U40_09765 PF03606 C4-dicarboxylate anaerobic carrier C2U40_09770 PF13193 AMP-binding enzyme C-terminal domain C2U40_09770 PF00501 AMP-binding enzyme C2U40_09775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C2U40_09775 PF01502 Phosphoribosyl-AMP cyclohydrolase C2U40_09780 PF00977 Histidine biosynthesis protein C2U40_09785 PF00072 Response regulator receiver domain C2U40_09785 PF00512 His Kinase A (phospho-acceptor) domain C2U40_09785 PF01627 Hpt domain C2U40_09785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_09795 PF00072 Response regulator receiver domain C2U40_09800 PF00977 Histidine biosynthesis protein C2U40_09805 PF00117 Glutamine amidotransferase class-I C2U40_09810 PF08645 Polynucleotide kinase 3 phosphatase C2U40_09810 PF00475 Imidazoleglycerol-phosphate dehydratase C2U40_09815 PF00155 Aminotransferase class I and II C2U40_09820 PF00815 Histidinol dehydrogenase C2U40_09825 PF08029 HisG, C-terminal domain C2U40_09825 PF01634 ATP phosphoribosyltransferase C2U40_09835 PF04851 Type III restriction enzyme, res subunit C2U40_09835 PF13307 Helicase C-terminal domain C2U40_09845 PF00814 Glycoprotease family C2U40_09855 PF08241 Methyltransferase domain C2U40_09855 PF12697 Alpha/beta hydrolase family C2U40_09860 PF13193 AMP-binding enzyme C-terminal domain C2U40_09860 PF00501 AMP-binding enzyme C2U40_09865 PF00570 HRDC domain C2U40_09865 PF01612 3'-5' exonuclease C2U40_09870 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_09880 PF01207 Dihydrouridine synthase (Dus) C2U40_09885 PF04304 Protein of unknown function (DUF454) C2U40_09890 PF00156 Phosphoribosyl transferase domain C2U40_09895 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C2U40_09895 PF12169 DNA polymerase III subunits gamma and tau domain III C2U40_09895 PF12170 DNA polymerase III tau subunit V interacting with alpha C2U40_09900 PF02575 YbaB/EbfC DNA-binding family C2U40_09910 PF00196 Bacterial regulatory proteins, luxR family C2U40_09910 PF00072 Response regulator receiver domain C2U40_09920 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C2U40_09920 PF04408 Helicase associated domain (HA2) C2U40_09920 PF11898 Domain of unknown function (DUF3418) C2U40_09920 PF00270 DEAD/DEAH box helicase C2U40_09920 PF00271 Helicase conserved C-terminal domain C2U40_09930 PF01386 Ribosomal L25p family C2U40_09935 PF00072 Response regulator receiver domain C2U40_09935 PF01627 Hpt domain C2U40_09935 PF00512 His Kinase A (phospho-acceptor) domain C2U40_09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_09935 PF00672 HAMP domain C2U40_09935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U40_09940 PF00072 Response regulator receiver domain C2U40_09945 PF00753 Metallo-beta-lactamase superfamily C2U40_09955 PF00586 AIR synthase related protein, N-terminal domain C2U40_09955 PF02769 AIR synthase related protein, C-terminal domain C2U40_09970 PF10672 S-adenosylmethionine-dependent methyltransferase C2U40_09970 PF17785 PUA-like domain C2U40_09975 PF01610 Transposase C2U40_09975 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_09975 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_09980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_09980 PF00672 HAMP domain C2U40_09980 PF12729 Four helix bundle sensory module for signal transduction C2U40_09985 PF00708 Acylphosphatase C2U40_09990 PF00043 Glutathione S-transferase, C-terminal domain C2U40_09990 PF02798 Glutathione S-transferase, N-terminal domain C2U40_09995 PF08264 Anticodon-binding domain of tRNA C2U40_09995 PF01588 Putative tRNA binding domain C2U40_09995 PF09334 tRNA synthetases class I (M) C2U40_10000 PF10609 NUBPL iron-transfer P-loop NTPase C2U40_10005 PF00485 Phosphoribulokinase / Uridine kinase family C2U40_10010 PF00692 dUTPase C2U40_10015 PF01384 Phosphate transporter family C2U40_10020 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_10020 PF01610 Transposase C2U40_10020 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_10025 PF12111 Polyribonucleotide phosphorylase C terminal C2U40_10025 PF00575 S1 RNA binding domain C2U40_10025 PF10150 Ribonuclease E/G family C2U40_10030 PF01479 S4 domain C2U40_10030 PF00849 RNA pseudouridylate synthase C2U40_10035 PF13419 Haloacid dehalogenase-like hydrolase C2U40_10040 PF02545 Maf-like protein C2U40_10045 PF07690 Major Facilitator Superfamily C2U40_10050 PF03466 LysR substrate binding domain C2U40_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_10060 PF02620 Large ribosomal RNA subunit accumulation protein YceD C2U40_10065 PF01783 Ribosomal L32p protein family C2U40_10070 PF02504 Fatty acid synthesis protein C2U40_10075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2U40_10075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2U40_10080 PF00698 Acyl transferase domain C2U40_10090 PF00550 Phosphopantetheine attachment site C2U40_10095 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U40_10095 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U40_10100 PF01063 Amino-transferase class IV C2U40_10105 PF02618 YceG-like family C2U40_10110 PF02223 Thymidylate kinase C2U40_10115 PF09115 DNA polymerase III, delta subunit, C terminal C2U40_10120 PF01026 TatD related DNase C2U40_10125 PF00589 Phage integrase family C2U40_10135 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_10135 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_10135 PF01610 Transposase C2U40_10140 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C2U40_10140 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C2U40_10140 PF01189 16S rRNA methyltransferase RsmB/F C2U40_10145 PF02470 MlaD protein C2U40_10150 PF04403 Paraquat-inducible protein A C2U40_10165 PF00285 Citrate synthase, C-terminal domain C2U40_10170 PF03972 MmgE/PrpD family C2U40_10185 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C2U40_10185 PF06974 Protein of unknown function (DUF1298) C2U40_10210 PF00106 short chain dehydrogenase C2U40_10220 PF07130 YebG protein C2U40_10230 PF05362 Lon protease (S16) C-terminal proteolytic domain C2U40_10230 PF13654 AAA domain C2U40_10235 PF07977 FabA-like domain C2U40_10240 PF04957 Ribosome modulation factor C2U40_10250 PF00005 ABC transporter C2U40_10250 PF16326 ABC transporter C-terminal domain C2U40_10250 PF12848 ABC transporter C2U40_10260 PF02926 THUMP domain C2U40_10260 PF10672 S-adenosylmethionine-dependent methyltransferase C2U40_10260 PF01170 Putative RNA methylase family UPF0020 C2U40_10265 PF07126 Cell-division protein ZapC C2U40_10270 PF01180 Dihydroorotate dehydrogenase C2U40_10275 PF05088 Bacterial NAD-glutamate dehydrogenase C2U40_10285 PF11940 Domain of unknown function (DUF3458) Ig-like fold C2U40_10285 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C2U40_10285 PF01433 Peptidase family M1 domain C2U40_10290 PF17804 Tail specific protease N-terminal domain C2U40_10290 PF03572 Peptidase family S41 C2U40_10290 PF11818 C-terminal domain of tail specific protease (DUF3340) C2U40_10290 PF00595 PDZ domain C2U40_10295 PF04352 ProQ/FINO family C2U40_10295 PF17516 ProQ C-terminal domain C2U40_10300 PF13185 GAF domain C2U40_10310 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2U40_10325 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C2U40_10325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2U40_10335 PF00403 Heavy-metal-associated domain C2U40_10350 PF13545 Crp-like helix-turn-helix domain C2U40_10350 PF00027 Cyclic nucleotide-binding domain C2U40_10355 PF00582 Universal stress protein family C2U40_10360 PF01171 PP-loop family C2U40_10375 PF00043 Glutathione S-transferase, C-terminal domain C2U40_10375 PF02798 Glutathione S-transferase, N-terminal domain C2U40_10380 PF05025 RbsD / FucU transport protein family C2U40_10385 PF00005 ABC transporter C2U40_10390 PF02653 Branched-chain amino acid transport system / permease component C2U40_10395 PF13407 Periplasmic binding protein domain C2U40_10400 PF00294 pfkB family carbohydrate kinase C2U40_10405 PF00356 Bacterial regulatory proteins, lacI family C2U40_10410 PF00990 Diguanylate cyclase, GGDEF domain C2U40_10410 PF00563 EAL domain C2U40_10410 PF03707 Bacterial signalling protein N terminal repeat C2U40_10420 PF02146 Sir2 family C2U40_10435 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U40_10435 PF00072 Response regulator receiver domain C2U40_10435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_10435 PF00512 His Kinase A (phospho-acceptor) domain C2U40_10440 PF00216 Bacterial DNA-binding protein C2U40_10445 PF03484 tRNA synthetase B5 domain C2U40_10445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C2U40_10445 PF03483 B3/4 domain C2U40_10445 PF01588 Putative tRNA binding domain C2U40_10445 PF03147 Ferredoxin-fold anticodon binding domain C2U40_10450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C2U40_10450 PF01409 tRNA synthetases class II core domain (F) C2U40_10455 PF00453 Ribosomal protein L20 C2U40_10460 PF01632 Ribosomal protein L35 C2U40_10465 PF00707 Translation initiation factor IF-3, C-terminal domain C2U40_10465 PF05198 Translation initiation factor IF-3, N-terminal domain C2U40_10470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U40_10470 PF03129 Anticodon binding domain C2U40_10470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2U40_10470 PF02824 TGS domain C2U40_10480 PF04055 Radical SAM superfamily C2U40_10485 PF00521 DNA gyrase/topoisomerase IV, subunit A C2U40_10485 PF03989 DNA gyrase C-terminal domain, beta-propeller C2U40_10495 PF13419 Haloacid dehalogenase-like hydrolase C2U40_10500 PF03477 ATP cone domain C2U40_10500 PF02867 Ribonucleotide reductase, barrel domain C2U40_10500 PF00317 Ribonucleotide reductase, all-alpha domain C2U40_10505 PF00268 Ribonucleotide reductase, small chain C2U40_10510 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U40_10515 PF03562 MltA specific insert domain C2U40_10515 PF06725 3D domain C2U40_10520 PF06945 Protein of unknown function (DUF1289) C2U40_10530 PF03613 PTS system mannose/fructose/sorbose family IID component C2U40_10535 PF03609 PTS system sorbose-specific iic component C2U40_10540 PF03610 PTS system fructose IIA component C2U40_10540 PF03830 PTS system sorbose subfamily IIB component C2U40_10555 PF00356 Bacterial regulatory proteins, lacI family C2U40_10555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U40_10560 PF06560 Glucose-6-phosphate isomerase (GPI) C2U40_10565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U40_10565 PF02378 Phosphotransferase system, EIIC C2U40_10570 PF00294 pfkB family carbohydrate kinase C2U40_10575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U40_10575 PF00381 PTS HPr component phosphorylation site C2U40_10580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U40_10580 PF00356 Bacterial regulatory proteins, lacI family C2U40_10585 PF03222 Tryptophan/tyrosine permease family C2U40_10600 PF00271 Helicase conserved C-terminal domain C2U40_10600 PF00270 DEAD/DEAH box helicase C2U40_10610 PF01264 Chorismate synthase C2U40_10615 PF05175 Methyltransferase small domain C2U40_10620 PF01713 Smr domain C2U40_10630 PF00990 Diguanylate cyclase, GGDEF domain C2U40_10630 PF08448 PAS fold C2U40_10635 PF00300 Histidine phosphatase superfamily (branch 1) C2U40_10650 PF08329 Chitinase A, N-terminal domain C2U40_10650 PF00704 Glycosyl hydrolases family 18 C2U40_10660 PF03831 PhnA domain C2U40_10660 PF08274 PhnA Zinc-Ribbon C2U40_10725 PF03330 Lytic transglycolase C2U40_10725 PF05036 Sporulation related domain C2U40_10730 PF16330 MukB hinge domain C2U40_10730 PF04310 MukB N-terminal C2U40_10735 PF04288 MukE-like family C2U40_10740 PF17193 MukF C-terminal domain C2U40_10740 PF17192 MukF middle domain C2U40_10740 PF03882 MukF winged-helix domain C2U40_10750 PF02698 DUF218 domain C2U40_10755 PF00121 Triosephosphate isomerase C2U40_10760 PF00365 Phosphofructokinase C2U40_10765 PF07687 Peptidase dimerisation domain C2U40_10765 PF01546 Peptidase family M20/M25/M40 C2U40_10770 PF13419 Haloacid dehalogenase-like hydrolase C2U40_10775 PF02789 Cytosol aminopeptidase family, N-terminal domain C2U40_10775 PF00883 Cytosol aminopeptidase family, catalytic domain C2U40_10820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U40_10820 PF00128 Alpha amylase, catalytic domain C2U40_10830 PF11398 Protein of unknown function (DUF2813) C2U40_10835 PF12833 Helix-turn-helix domain C2U40_10835 PF14525 AraC-binding-like domain C2U40_10845 PF03466 LysR substrate binding domain C2U40_10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_10850 PF01925 Sulfite exporter TauE/SafE C2U40_10860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U40_10860 PF18029 Glyoxalase-like domain C2U40_10865 PF01820 D-ala D-ala ligase N-terminus C2U40_10865 PF07478 D-ala D-ala ligase C-terminus C2U40_10880 PF00255 Glutathione peroxidase C2U40_10885 PF00271 Helicase conserved C-terminal domain C2U40_10885 PF00270 DEAD/DEAH box helicase C2U40_10890 PF13673 Acetyltransferase (GNAT) domain C2U40_10900 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C2U40_10910 PF01928 CYTH domain C2U40_10920 PF00583 Acetyltransferase (GNAT) family C2U40_10925 PF00465 Iron-containing alcohol dehydrogenase C2U40_10930 PF03992 Antibiotic biosynthesis monooxygenase C2U40_10935 PF08543 Phosphomethylpyrimidine kinase C2U40_10960 PF00561 alpha/beta hydrolase fold C2U40_10960 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C2U40_10965 PF01575 MaoC like domain C2U40_10980 PF00664 ABC transporter transmembrane region C2U40_10980 PF00005 ABC transporter C2U40_10990 PF00664 ABC transporter transmembrane region C2U40_10990 PF00005 ABC transporter C2U40_10995 PF00672 HAMP domain C2U40_10995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_10995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U40_10995 PF00072 Response regulator receiver domain C2U40_10995 PF01627 Hpt domain C2U40_10995 PF00512 His Kinase A (phospho-acceptor) domain C2U40_11000 PF00085 Thioredoxin C2U40_11005 PF00939 Sodium:sulfate symporter transmembrane region C2U40_11010 PF00343 Carbohydrate phosphorylase C2U40_11035 PF00425 chorismate binding enzyme C2U40_11035 PF04715 Anthranilate synthase component I, N terminal region C2U40_11040 PF00293 NUDIX domain C2U40_11045 PF03222 Tryptophan/tyrosine permease family C2U40_11050 PF00375 Sodium:dicarboxylate symporter family C2U40_11055 PF00270 DEAD/DEAH box helicase C2U40_11055 PF00271 Helicase conserved C-terminal domain C2U40_11055 PF00570 HRDC domain C2U40_11055 PF16124 RecQ zinc-binding C2U40_11055 PF09382 RQC domain C2U40_11060 PF06798 PrkA serine protein kinase C-terminal domain C2U40_11060 PF08298 PrkA AAA domain C2U40_11065 PF04285 Protein of unknown function (DUF444) C2U40_11070 PF04293 SpoVR like protein C2U40_11075 PF07840 FadR C-terminal domain C2U40_11075 PF00392 Bacterial regulatory proteins, gntR family C2U40_11080 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C2U40_11085 PF02600 Disulfide bond formation protein DsbB C2U40_11090 PF09335 SNARE associated Golgi protein C2U40_11100 PF00271 Helicase conserved C-terminal domain C2U40_11100 PF04851 Type III restriction enzyme, res subunit C2U40_11100 PF02151 UvrB/uvrC motif C2U40_11100 PF17757 UvrB interaction domain C2U40_11100 PF12344 Ultra-violet resistance protein B C2U40_11115 PF02080 TrkA-C domain C2U40_11115 PF06826 Predicted Permease Membrane Region C2U40_11120 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_11120 PF01464 Transglycosylase SLT domain C2U40_11135 PF01970 Tripartite tricarboxylate transporter TctA family C2U40_11140 PF08279 HTH domain C2U40_11140 PF12431 Transcriptional regulator C2U40_11140 PF00072 Response regulator receiver domain C2U40_11145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_11145 PF00989 PAS fold C2U40_11145 PF17203 Single cache domain 3 C2U40_11145 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C2U40_11150 PF00480 ROK family C2U40_11150 PF01047 MarR family C2U40_11155 PF00672 HAMP domain C2U40_11155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_11155 PF17200 Single Cache domain 2 C2U40_11160 PF02810 SEC-C motif C2U40_11165 PF01266 FAD dependent oxidoreductase C2U40_11165 PF04324 BFD-like [2Fe-2S] binding domain C2U40_11170 PF00890 FAD binding domain C2U40_11175 PF02754 Cysteine-rich domain C2U40_11175 PF13183 4Fe-4S dicluster domain C2U40_11180 PF02335 Cytochrome c552 C2U40_11185 PF13435 Cytochrome c554 and c-prime C2U40_11185 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C2U40_11190 PF13247 4Fe-4S dicluster domain C2U40_11190 PF00037 4Fe-4S binding domain C2U40_11195 PF03916 Polysulphide reductase, NrfD C2U40_11200 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C2U40_11200 PF01578 Cytochrome C assembly protein C2U40_11205 PF08534 Redoxin C2U40_11210 PF03918 Cytochrome C biogenesis protein C2U40_11220 PF00768 D-alanyl-D-alanine carboxypeptidase C2U40_11225 PF01212 Beta-eliminating lyase C2U40_11235 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C2U40_11240 PF01266 FAD dependent oxidoreductase C2U40_11250 PF07969 Amidohydrolase family C2U40_11255 PF00478 IMP dehydrogenase / GMP reductase domain C2U40_11255 PF00571 CBS domain C2U40_11265 PF08267 Cobalamin-independent synthase, N-terminal domain C2U40_11265 PF01717 Cobalamin-independent synthase, Catalytic domain C2U40_11270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_11270 PF03466 LysR substrate binding domain C2U40_11280 PF07715 TonB-dependent Receptor Plug Domain C2U40_11280 PF00593 TonB dependent receptor C2U40_11285 PF12833 Helix-turn-helix domain C2U40_11290 PF00106 short chain dehydrogenase C2U40_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_11295 PF03466 LysR substrate binding domain C2U40_11300 PF13460 NAD(P)H-binding C2U40_11310 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U40_11315 PF00675 Insulinase (Peptidase family M16) C2U40_11315 PF05193 Peptidase M16 inactive domain C2U40_11320 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U40_11320 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U40_11325 PF00893 Small Multidrug Resistance protein C2U40_11330 PF18381 YcaO cyclodehydratase C-terminal domain C2U40_11330 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C2U40_11335 PF01226 Formate/nitrite transporter C2U40_11340 PF02901 Pyruvate formate lyase-like C2U40_11340 PF01228 Glycine radical C2U40_11355 PF00266 Aminotransferase class-V C2U40_11360 PF07702 UTRA domain C2U40_11360 PF00392 Bacterial regulatory proteins, gntR family C2U40_11370 PF00005 ABC transporter C2U40_11375 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_11380 PF01266 FAD dependent oxidoreductase C2U40_11385 PF03692 Putative zinc- or iron-chelating domain C2U40_11390 PF02629 CoA binding domain C2U40_11390 PF00549 CoA-ligase C2U40_11395 PF00549 CoA-ligase C2U40_11395 PF08442 ATP-grasp domain C2U40_11400 PF00364 Biotin-requiring enzyme C2U40_11400 PF02817 e3 binding domain C2U40_11400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U40_11405 PF16870 2-oxoglutarate dehydrogenase C-terminal C2U40_11405 PF00676 Dehydrogenase E1 component C2U40_11405 PF16078 2-oxoglutarate dehydrogenase N-terminus C2U40_11405 PF02779 Transketolase, pyrimidine binding domain C2U40_11410 PF13085 2Fe-2S iron-sulfur cluster binding domain C2U40_11415 PF02910 Fumarate reductase flavoprotein C-term C2U40_11415 PF00890 FAD binding domain C2U40_11420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2U40_11425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2U40_11430 PF00285 Citrate synthase, C-terminal domain C2U40_11445 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U40_11445 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U40_11450 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C2U40_11450 PF01266 FAD dependent oxidoreductase C2U40_11460 PF03606 C4-dicarboxylate anaerobic carrier C2U40_11475 PF01863 Protein of unknown function DUF45 C2U40_11490 PF01197 Ribosomal protein L31 C2U40_11495 PF00444 Ribosomal protein L36 C2U40_11500 PF05726 Pirin C-terminal cupin domain C2U40_11500 PF02678 Pirin C2U40_11505 PF03466 LysR substrate binding domain C2U40_11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_11510 PF12833 Helix-turn-helix domain C2U40_11510 PF02311 AraC-like ligand binding domain C2U40_11515 PF02653 Branched-chain amino acid transport system / permease component C2U40_11520 PF00005 ABC transporter C2U40_11525 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U40_11530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C2U40_11535 PF00596 Class II Aldolase and Adducin N-terminal domain C2U40_11540 PF11762 L-arabinose isomerase C-terminal domain C2U40_11540 PF02610 L-arabinose isomerase C2U40_11545 PF00929 Exonuclease C2U40_11545 PF08411 Exonuclease C-terminal C2U40_11560 PF03788 LrgA family C2U40_11565 PF04172 LrgB-like family C2U40_11570 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C2U40_11570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2U40_11575 PF00501 AMP-binding enzyme C2U40_11580 PF08891 YfcL protein C2U40_11590 PF03741 Integral membrane protein TerC family C2U40_11595 PF00691 OmpA family C2U40_11600 PF17152 Periplasmic sensor domain C2U40_11600 PF00990 Diguanylate cyclase, GGDEF domain C2U40_11605 PF13689 YfiR/HmsC-like C2U40_11610 PF18024 Helix-turn-helix domain C2U40_11610 PF00158 Sigma-54 interaction domain C2U40_11620 PF01329 Pterin 4 alpha carbinolamine dehydratase C2U40_11625 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C2U40_11630 PF05128 Domain of unknown function (DUF697) C2U40_11635 PF04317 YcjX-like family, DUF463 C2U40_11645 PF06667 Phage shock protein B C2U40_11650 PF04012 PspA/IM30 family C2U40_11655 PF00158 Sigma-54 interaction domain C2U40_11655 PF02954 Bacterial regulatory protein, Fis family C2U40_11660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_11665 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_11670 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U40_11670 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_11675 PF00005 ABC transporter C2U40_11675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U40_11680 PF00005 ABC transporter C2U40_11685 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C2U40_11690 PF00156 Phosphoribosyl transferase domain C2U40_11695 PF02674 Colicin V production protein C2U40_11700 PF02403 Seryl-tRNA synthetase N-terminal domain C2U40_11700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U40_11710 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_11710 PF12002 MgsA AAA+ ATPase C terminal C2U40_11710 PF16193 AAA C-terminal domain C2U40_11715 PF03548 Outer membrane lipoprotein carrier protein LolA C2U40_11720 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C2U40_11720 PF17854 FtsK alpha domain C2U40_11720 PF09397 Ftsk gamma domain C2U40_11720 PF01580 FtsK/SpoIIIE family C2U40_11725 PF01037 Lrp/AsnC ligand binding domain C2U40_11730 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2U40_11730 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2U40_11735 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_11740 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_11740 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_11740 PF01610 Transposase C2U40_11745 PF00990 Diguanylate cyclase, GGDEF domain C2U40_11745 PF17158 Membrane-associated sensor, integral membrane domain C2U40_11750 PF05433 Glycine zipper 2TM domain C2U40_11755 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C2U40_11760 PF04376 Arginine-tRNA-protein transferase, N terminus C2U40_11760 PF04377 Arginine-tRNA-protein transferase, C terminus C2U40_11765 PF01176 Translation initiation factor 1A / IF-1 C2U40_11770 PF17871 AAA lid domain C2U40_11770 PF02861 Clp amino terminal domain, pathogenicity island component C2U40_11770 PF10431 C-terminal, D2-small domain, of ClpB protein C2U40_11770 PF07724 AAA domain (Cdc48 subfamily) C2U40_11770 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_11775 PF02617 ATP-dependent Clp protease adaptor protein ClpS C2U40_11780 PF00313 'Cold-shock' DNA-binding domain C2U40_11785 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C2U40_11785 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C2U40_11815 PF04717 Type VI secretion system, phage-baseplate injector C2U40_11845 PF06505 Activator of aromatic catabolism C2U40_11845 PF02830 V4R domain C2U40_11845 PF02954 Bacterial regulatory protein, Fis family C2U40_11845 PF00158 Sigma-54 interaction domain C2U40_11850 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_11850 PF07724 AAA domain (Cdc48 subfamily) C2U40_11850 PF17871 AAA lid domain C2U40_11850 PF10431 C-terminal, D2-small domain, of ClpB protein C2U40_11910 PF05593 RHS Repeat C2U40_11910 PF03527 RHS protein C2U40_11920 PF04717 Type VI secretion system, phage-baseplate injector C2U40_11925 PF05638 Type VI secretion system effector, Hcp C2U40_11940 PF10722 Putative bacterial sensory transduction regulator C2U40_11950 PF00265 Thymidine kinase C2U40_11955 PF03553 Na+/H+ antiporter family C2U40_11960 PF00816 H-NS histone family C2U40_11965 PF01923 Cobalamin adenosyltransferase C2U40_11970 PF12843 Putative quorum-sensing-regulated virulence factor C2U40_11975 PF04055 Radical SAM superfamily C2U40_11980 PF06508 Queuosine biosynthesis protein QueC C2U40_11995 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C2U40_12000 PF18073 Rubredoxin metal binding domain C2U40_12010 PF00216 Bacterial DNA-binding protein C2U40_12015 PF00575 S1 RNA binding domain C2U40_12020 PF02224 Cytidylate kinase C2U40_12025 PF00925 GTP cyclohydrolase II C2U40_12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_12030 PF03466 LysR substrate binding domain C2U40_12035 PF03466 LysR substrate binding domain C2U40_12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_12040 PF07690 Major Facilitator Superfamily C2U40_12055 PF00881 Nitroreductase family C2U40_12060 PF00990 Diguanylate cyclase, GGDEF domain C2U40_12060 PF03707 Bacterial signalling protein N terminal repeat C2U40_12060 PF00563 EAL domain C2U40_12060 PF13188 PAS domain C2U40_12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_12070 PF03466 LysR substrate binding domain C2U40_12075 PF00072 Response regulator receiver domain C2U40_12085 PF01212 Beta-eliminating lyase C2U40_12100 PF00248 Aldo/keto reductase family C2U40_12105 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C2U40_12115 PF03411 Penicillin-insensitive murein endopeptidase C2U40_12125 PF04536 TPM domain C2U40_12140 PF01618 MotA/TolQ/ExbB proton channel family C2U40_12145 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U40_12145 PF00691 OmpA family C2U40_12150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C2U40_12155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2U40_12160 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C2U40_12160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C2U40_12170 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2U40_12170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C2U40_12175 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2U40_12175 PF00384 Molybdopterin oxidoreductase C2U40_12175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U40_12180 PF00146 NADH dehydrogenase C2U40_12185 PF12838 4Fe-4S dicluster domain C2U40_12190 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C2U40_12195 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C2U40_12200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C2U40_12200 PF00361 Proton-conducting membrane transporter C2U40_12205 PF00361 Proton-conducting membrane transporter C2U40_12210 PF00361 Proton-conducting membrane transporter C2U40_12220 PF00072 Response regulator receiver domain C2U40_12225 PF01966 HD domain C2U40_12230 PF02769 AIR synthase related protein, C-terminal domain C2U40_12230 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C2U40_12230 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C2U40_12235 PF01464 Transglycosylase SLT domain C2U40_12235 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_12245 PF07191 zinc-ribbons C2U40_12250 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_12250 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_12250 PF01610 Transposase C2U40_12255 PF01926 50S ribosome-binding GTPase C2U40_12255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C2U40_12260 PF13360 PQQ-like domain C2U40_12265 PF09976 Tetratricopeptide repeat-like domain C2U40_12270 PF03129 Anticodon binding domain C2U40_12270 PF13393 Histidyl-tRNA synthetase C2U40_12275 PF04551 GcpE protein C2U40_12280 PF13464 Domain of unknown function (DUF4115) C2U40_12290 PF04055 Radical SAM superfamily C2U40_12295 PF00334 Nucleoside diphosphate kinase C2U40_12305 PF00883 Cytosol aminopeptidase family, catalytic domain C2U40_12305 PF12404 Peptidase C2U40_12310 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U40_12315 PF00012 Hsp70 protein C2U40_12320 PF07743 HSCB C-terminal oligomerisation domain C2U40_12325 PF01521 Iron-sulphur cluster biosynthesis C2U40_12330 PF01592 NifU-like N terminal domain C2U40_12335 PF00266 Aminotransferase class-V C2U40_12340 PF02082 Transcriptional regulator C2U40_12345 PF00588 SpoU rRNA Methylase family C2U40_12370 PF07719 Tetratricopeptide repeat C2U40_12370 PF13181 Tetratricopeptide repeat C2U40_12380 PF07549 SecD/SecF GG Motif C2U40_12380 PF02355 Protein export membrane protein C2U40_12385 PF02355 Protein export membrane protein C2U40_12385 PF13721 SecD export protein N-terminal TM region C2U40_12385 PF07549 SecD/SecF GG Motif C2U40_12390 PF02699 Preprotein translocase subunit C2U40_12395 PF01702 Queuine tRNA-ribosyltransferase C2U40_12400 PF02547 Queuosine biosynthesis protein C2U40_12405 PF00571 CBS domain C2U40_12410 PF00578 AhpC/TSA family C2U40_12410 PF10417 C-terminal domain of 1-Cys peroxiredoxin C2U40_12415 PF13192 Thioredoxin domain C2U40_12415 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_12420 PF07690 Major Facilitator Superfamily C2U40_12430 PF08241 Methyltransferase domain C2U40_12435 PF03960 ArsC family C2U40_12440 PF01758 Sodium Bile acid symporter family C2U40_12445 PF02374 Anion-transporting ATPase C2U40_12450 PF06953 Arsenical resistance operon trans-acting repressor ArsD C2U40_12455 PF01022 Bacterial regulatory protein, arsR family C2U40_12470 PF02347 Glycine cleavage system P-protein C2U40_12475 PF01597 Glycine cleavage H-protein C2U40_12480 PF01571 Aminomethyltransferase folate-binding domain C2U40_12480 PF08669 Glycine cleavage T-protein C-terminal barrel domain C2U40_12485 PF01494 FAD binding domain C2U40_12490 PF01494 FAD binding domain C2U40_12495 PF03695 Uncharacterised protein family (UPF0149) C2U40_12500 PF05164 Cell division protein ZapA C2U40_12510 PF07690 Major Facilitator Superfamily C2U40_12515 PF02798 Glutathione S-transferase, N-terminal domain C2U40_12515 PF00043 Glutathione S-transferase, C-terminal domain C2U40_12555 PF00459 Inositol monophosphatase family C2U40_12560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_12560 PF00672 HAMP domain C2U40_12560 PF12729 Four helix bundle sensory module for signal transduction C2U40_12565 PF02535 ZIP Zinc transporter C2U40_12575 PF01048 Phosphorylase superfamily C2U40_12585 PF01497 Periplasmic binding protein C2U40_12600 PF02561 Flagellar protein FliS C2U40_12605 PF07195 Flagellar hook-associated protein 2 C-terminus C2U40_12605 PF02465 Flagellar hook-associated protein 2 N-terminus C2U40_12605 PF07196 Flagellin hook IN motif C2U40_12615 PF00669 Bacterial flagellin N-terminal helical region C2U40_12615 PF07196 Flagellin hook IN motif C2U40_12615 PF00700 Bacterial flagellin C-terminal helical region C2U40_12620 PF00700 Bacterial flagellin C-terminal helical region C2U40_12620 PF00669 Bacterial flagellin N-terminal helical region C2U40_12620 PF07196 Flagellin hook IN motif C2U40_12630 PF03458 UPF0126 domain C2U40_12640 PF02568 Thiamine biosynthesis protein (ThiI) C2U40_12640 PF02926 THUMP domain C2U40_12660 PF10711 Hypothetical protein (DUF2513) C2U40_12675 PF00239 Resolvase, N terminal domain C2U40_12675 PF02796 Helix-turn-helix domain of resolvase C2U40_12685 PF02899 Phage integrase, N-terminal SAM-like domain C2U40_12685 PF00589 Phage integrase family C2U40_12730 PF00905 Penicillin binding protein transpeptidase domain C2U40_12730 PF00912 Transglycosylase C2U40_12730 PF06832 Penicillin-Binding Protein C-terminus Family C2U40_12735 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C2U40_12735 PF00207 Alpha-2-macroglobulin family C2U40_12735 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C2U40_12735 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C2U40_12735 PF01835 MG2 domain C2U40_12735 PF07678 A-macroglobulin TED domain C2U40_12735 PF07703 Alpha-2-macroglobulin bait region domain C2U40_12735 PF17962 Bacterial macroglobulin domain 6 C2U40_12735 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C2U40_12740 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_12740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U40_12745 PF03707 Bacterial signalling protein N terminal repeat C2U40_12745 PF00990 Diguanylate cyclase, GGDEF domain C2U40_12745 PF00563 EAL domain C2U40_12750 PF04055 Radical SAM superfamily C2U40_12760 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_12765 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_12770 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_12775 PF00005 ABC transporter C2U40_12780 PF03956 Lysine exporter LysO C2U40_12785 PF01979 Amidohydrolase family C2U40_12790 PF04336 Acyl carrier protein phosphodiesterase C2U40_12805 PF03960 ArsC family C2U40_12810 PF00578 AhpC/TSA family C2U40_12815 PF13181 Tetratricopeptide repeat C2U40_12815 PF01435 Peptidase family M48 C2U40_12820 PF01206 Sulfurtransferase TusA C2U40_12825 PF01594 AI-2E family transporter C2U40_12835 PF00561 alpha/beta hydrolase fold C2U40_12840 PF03976 Polyphosphate kinase 2 (PPK2) C2U40_12845 PF00005 ABC transporter C2U40_12845 PF08402 TOBE domain C2U40_12850 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_12855 PF14785 Maltose transport system permease protein MalF P2 domain C2U40_12855 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_12860 PF01547 Bacterial extracellular solute-binding protein C2U40_12865 PF04245 37-kD nucleoid-associated bacterial protein C2U40_12870 PF07208 Protein of unknown function (DUF1414) C2U40_12875 PF00884 Sulfatase C2U40_12875 PF11893 Domain of unknown function (DUF3413) C2U40_12880 PF07715 TonB-dependent Receptor Plug Domain C2U40_12880 PF00593 TonB dependent receptor C2U40_12885 PF00326 Prolyl oligopeptidase family C2U40_12885 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2U40_12905 PF03974 Ecotin C2U40_12910 PF04219 Protein of unknown function, DUF C2U40_12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_12915 PF03466 LysR substrate binding domain C2U40_12920 PF02153 Prephenate dehydrogenase C2U40_12920 PF01817 Chorismate mutase type II C2U40_12925 PF00793 DAHP synthetase I family C2U40_12930 PF03009 Glycerophosphoryl diester phosphodiesterase family C2U40_12935 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C2U40_12935 PF01266 FAD dependent oxidoreductase C2U40_12945 PF00455 DeoR C terminal sensor domain C2U40_12945 PF08220 DeoR-like helix-turn-helix domain C2U40_12950 PF07690 Major Facilitator Superfamily C2U40_12955 PF00230 Major intrinsic protein C2U40_12960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C2U40_12960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C2U40_12965 PF03466 LysR substrate binding domain C2U40_12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_12990 PF00248 Aldo/keto reductase family C2U40_12995 PF07690 Major Facilitator Superfamily C2U40_13005 PF02322 Cytochrome bd terminal oxidase subunit II C2U40_13010 PF01654 Cytochrome bd terminal oxidase subunit I C2U40_13015 PF00392 Bacterial regulatory proteins, gntR family C2U40_13015 PF00155 Aminotransferase class I and II C2U40_13020 PF04391 Protein of unknown function (DUF533) C2U40_13035 PF10689 Protein of unknown function (DUF2496) C2U40_13045 PF07690 Major Facilitator Superfamily C2U40_13050 PF03466 LysR substrate binding domain C2U40_13050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_13060 PF07690 Major Facilitator Superfamily C2U40_13065 PF01479 S4 domain C2U40_13065 PF00849 RNA pseudouridylate synthase C2U40_13075 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C2U40_13075 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2U40_13085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U40_13095 PF01844 HNH endonuclease C2U40_13100 PF00300 Histidine phosphatase superfamily (branch 1) C2U40_13110 PF03313 Serine dehydratase alpha chain C2U40_13115 PF01042 Endoribonuclease L-PSP C2U40_13125 PF00672 HAMP domain C2U40_13125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_13140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U40_13140 PF17810 Arginine decarboxylase helical bundle domain C2U40_13140 PF17944 Arginine decarboxylase C-terminal helical extension C2U40_13160 PF01546 Peptidase family M20/M25/M40 C2U40_13160 PF07687 Peptidase dimerisation domain C2U40_13185 PF04264 YceI-like domain C2U40_13190 PF03466 LysR substrate binding domain C2U40_13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_13200 PF01268 Formate--tetrahydrofolate ligase C2U40_13205 PF01268 Formate--tetrahydrofolate ligase C2U40_13210 PF00672 HAMP domain C2U40_13210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_13210 PF17200 Single Cache domain 2 C2U40_13215 PF01227 GTP cyclohydrolase I C2U40_13220 PF03453 MoeA N-terminal region (domain I and II) C2U40_13220 PF03454 MoeA C-terminal region (domain IV) C2U40_13220 PF00994 Probable molybdopterin binding domain C2U40_13225 PF00899 ThiF family C2U40_13230 PF00155 Aminotransferase class I and II C2U40_13255 PF06733 DEAD_2 C2U40_13255 PF13307 Helicase C-terminal domain C2U40_13265 PF00850 Histone deacetylase domain C2U40_13270 PF07690 Major Facilitator Superfamily C2U40_13275 PF01926 50S ribosome-binding GTPase C2U40_13280 PF00245 Alkaline phosphatase C2U40_13285 PF00245 Alkaline phosphatase C2U40_13300 PF14760 Rnk N-terminus C2U40_13300 PF01272 Transcription elongation factor, GreA/GreB, C-term C2U40_13305 PF00196 Bacterial regulatory proteins, luxR family C2U40_13305 PF00072 Response regulator receiver domain C2U40_13310 PF07730 Histidine kinase C2U40_13310 PF05231 MASE1 C2U40_13310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_13315 PF07690 Major Facilitator Superfamily C2U40_13320 PF08448 PAS fold C2U40_13320 PF00990 Diguanylate cyclase, GGDEF domain C2U40_13325 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_13330 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_13335 PF00005 ABC transporter C2U40_13345 PF04116 Fatty acid hydroxylase superfamily C2U40_13350 PF13520 Amino acid permease C2U40_13365 PF01595 Cyclin M transmembrane N-terminal domain C2U40_13365 PF03471 Transporter associated domain C2U40_13365 PF00571 CBS domain C2U40_13370 PF01895 PhoU domain C2U40_13380 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_13385 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_13390 PF14437 MafB19-like deaminase C2U40_13400 PF01274 Malate synthase C2U40_13405 PF00463 Isocitrate lyase family C2U40_13410 PF00308 Bacterial dnaA protein C2U40_13425 PF02769 AIR synthase related protein, C-terminal domain C2U40_13425 PF00586 AIR synthase related protein, N-terminal domain C2U40_13430 PF00551 Formyl transferase C2U40_13435 PF01784 NIF3 (NGG1p interacting factor 3) C2U40_13440 PF02954 Bacterial regulatory protein, Fis family C2U40_13440 PF00158 Sigma-54 interaction domain C2U40_13445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_13445 PF00989 PAS fold C2U40_13445 PF00512 His Kinase A (phospho-acceptor) domain C2U40_13450 PF02954 Bacterial regulatory protein, Fis family C2U40_13450 PF00072 Response regulator receiver domain C2U40_13450 PF00158 Sigma-54 interaction domain C2U40_13460 PF01842 ACT domain C2U40_13465 PF02503 Polyphosphate kinase middle domain C2U40_13465 PF13089 Polyphosphate kinase N-terminal domain C2U40_13465 PF17941 Polyphosphate kinase C-terminal domain 1 C2U40_13465 PF13090 Polyphosphate kinase C-terminal domain 2 C2U40_13470 PF02541 Ppx/GppA phosphatase family C2U40_13480 PF00929 Exonuclease C2U40_13485 PF00075 RNase H C2U40_13490 PF08241 Methyltransferase domain C2U40_13495 PF16123 Hydroxyacylglutathione hydrolase C-terminus C2U40_13495 PF00753 Metallo-beta-lactamase superfamily C2U40_13500 PF01464 Transglycosylase SLT domain C2U40_13500 PF01476 LysM domain C2U40_13505 PF01609 Transposase DDE domain C2U40_13505 PF13006 Insertion element 4 transposase N-terminal C2U40_13510 PF03372 Endonuclease/Exonuclease/phosphatase family C2U40_13520 PF03061 Thioesterase superfamily C2U40_13530 PF00356 Bacterial regulatory proteins, lacI family C2U40_13535 PF01464 Transglycosylase SLT domain C2U40_13535 PF14718 Soluble lytic murein transglycosylase L domain C2U40_13540 PF00563 EAL domain C2U40_13540 PF03707 Bacterial signalling protein N terminal repeat C2U40_13540 PF00990 Diguanylate cyclase, GGDEF domain C2U40_13545 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C2U40_13565 PF04357 TamB, inner membrane protein subunit of TAM complex C2U40_13570 PF01103 Surface antigen C2U40_13570 PF17243 POTRA domain TamA domain 1 C2U40_13570 PF07244 Surface antigen variable number repeat C2U40_13580 PF05698 Bacterial trigger factor protein (TF) C-terminus C2U40_13585 PF01625 Peptide methionine sulfoxide reductase C2U40_13595 PF02627 Carboxymuconolactone decarboxylase family C2U40_13600 PF00403 Heavy-metal-associated domain C2U40_13600 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_13600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U40_13605 PF13416 Bacterial extracellular solute-binding protein C2U40_13615 PF00005 ABC transporter C2U40_13620 PF01066 CDP-alcohol phosphatidyltransferase C2U40_13625 PF13406 Transglycosylase SLT domain C2U40_13640 PF01047 MarR family C2U40_13650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2U40_13650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2U40_13650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2U40_13650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2U40_13655 PF03925 SeqA protein C-terminal domain C2U40_13655 PF17206 SeqA protein N-terminal domain C2U40_13660 PF12697 Alpha/beta hydrolase family C2U40_13670 PF01402 Ribbon-helix-helix protein, copG family C2U40_13675 PF00258 Flavodoxin C2U40_13685 PF01475 Ferric uptake regulator family C2U40_13690 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C2U40_13690 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U40_13695 PF03173 Putative carbohydrate binding domain C2U40_13695 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C2U40_13695 PF00728 Glycosyl hydrolase family 20, catalytic domain C2U40_13695 PF02838 Glycosyl hydrolase family 20, domain 2 C2U40_13700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U40_13700 PF00367 phosphotransferase system, EIIB C2U40_13700 PF02378 Phosphotransferase system, EIIC C2U40_13705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C2U40_13710 PF01979 Amidohydrolase family C2U40_13715 PF01047 MarR family C2U40_13715 PF00480 ROK family C2U40_13720 PF00884 Sulfatase C2U40_13720 PF08019 Phosphoethanolamine transferase EptA/EptB C2U40_13725 PF01709 Transcriptional regulator C2U40_13730 PF01336 OB-fold nucleic acid binding domain C2U40_13730 PF02938 GAD domain C2U40_13730 PF00152 tRNA synthetases class II (D, K and N) C2U40_13735 PF01904 Protein of unknown function DUF72 C2U40_13740 PF13649 Methyltransferase domain C2U40_13745 PF08003 Protein of unknown function (DUF1698) C2U40_13765 PF00578 AhpC/TSA family C2U40_13765 PF10417 C-terminal domain of 1-Cys peroxiredoxin C2U40_13770 PF03466 LysR substrate binding domain C2U40_13770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_13775 PF12563 Hemolytic toxin N terminal C2U40_13775 PF07968 Leukocidin/Hemolysin toxin family C2U40_13780 PF00877 NlpC/P60 family C2U40_13790 PF00171 Aldehyde dehydrogenase family C2U40_13795 PF00440 Bacterial regulatory proteins, tetR family C2U40_13795 PF08359 YsiA-like protein, C-terminal region C2U40_13805 PF00465 Iron-containing alcohol dehydrogenase C2U40_13815 PF00291 Pyridoxal-phosphate dependent enzyme C2U40_13835 PF01554 MatE C2U40_13850 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C2U40_13850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U40_13850 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C2U40_13850 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C2U40_13850 PF10371 Domain of unknown function C2U40_13855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C2U40_13855 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_13855 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2U40_13860 PF03473 MOSC domain C2U40_13860 PF03476 MOSC N-terminal beta barrel domain C2U40_13860 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U40_13860 PF03476 MOSC N-terminal beta barrel domain C2U40_13860 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U40_13860 PF03473 MOSC domain C2U40_13865 PF01610 Transposase C2U40_13865 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_13865 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_13870 PF08447 PAS fold C2U40_13870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_13870 PF13426 PAS domain C2U40_13875 PF01435 Peptidase family M48 C2U40_13885 PF08241 Methyltransferase domain C2U40_13885 PF12697 Alpha/beta hydrolase family C2U40_13890 PF00155 Aminotransferase class I and II C2U40_13895 PF04055 Radical SAM superfamily C2U40_13895 PF06968 Biotin and Thiamin Synthesis associated domain C2U40_13915 PF00152 tRNA synthetases class II (D, K and N) C2U40_13915 PF01336 OB-fold nucleic acid binding domain C2U40_13920 PF03605 Anaerobic c4-dicarboxylate membrane transporter C2U40_13930 PF07687 Peptidase dimerisation domain C2U40_13930 PF01546 Peptidase family M20/M25/M40 C2U40_13935 PF03606 C4-dicarboxylate anaerobic carrier C2U40_13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_13945 PF03466 LysR substrate binding domain C2U40_13955 PF02796 Helix-turn-helix domain of resolvase C2U40_13955 PF00239 Resolvase, N terminal domain C2U40_13965 PF07508 Recombinase C2U40_13965 PF00239 Resolvase, N terminal domain C2U40_13965 PF13408 Recombinase zinc beta ribbon domain C2U40_13970 PF03960 ArsC family C2U40_13975 PF01546 Peptidase family M20/M25/M40 C2U40_13975 PF07687 Peptidase dimerisation domain C2U40_13980 PF02557 D-alanyl-D-alanine carboxypeptidase C2U40_13990 PF03471 Transporter associated domain C2U40_13990 PF00999 Sodium/hydrogen exchanger family C2U40_13990 PF02080 TrkA-C domain C2U40_14000 PF02080 TrkA-C domain C2U40_14000 PF03471 Transporter associated domain C2U40_14000 PF00999 Sodium/hydrogen exchanger family C2U40_14010 PF01810 LysE type translocator C2U40_14015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_14015 PF00672 HAMP domain C2U40_14020 PF07509 Protein of unknown function (DUF1523) C2U40_14035 PF01156 Inosine-uridine preferring nucleoside hydrolase C2U40_14040 PF00849 RNA pseudouridylate synthase C2U40_14045 PF01048 Phosphorylase superfamily C2U40_14050 PF00465 Iron-containing alcohol dehydrogenase C2U40_14055 PF04355 SmpA / OmlA family C2U40_14060 PF13460 NAD(P)H-binding C2U40_14070 PF03364 Polyketide cyclase / dehydrase and lipid transport C2U40_14075 PF01668 SmpB protein C2U40_14085 PF00589 Phage integrase family C2U40_14085 PF13356 Arm DNA-binding domain C2U40_14095 PF13148 Protein of unknown function (DUF3987) C2U40_14110 PF09588 YqaJ-like viral recombinase domain C2U40_14155 PF04002 RadC-like JAB domain C2U40_14205 PF00589 Phage integrase family C2U40_14205 PF13495 Phage integrase, N-terminal SAM-like domain C2U40_14210 PF05598 Transposase domain (DUF772) C2U40_14210 PF01609 Transposase DDE domain C2U40_14225 PF12419 SNF2 Helicase protein C2U40_14225 PF00271 Helicase conserved C-terminal domain C2U40_14225 PF00176 SNF2 family N-terminal domain C2U40_14250 PF11867 Domain of unknown function (DUF3387) C2U40_14250 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U40_14250 PF18766 SWI2/SNF2 ATPase C2U40_14270 PF12161 HsdM N-terminal domain C2U40_14270 PF02384 N-6 DNA Methylase C2U40_14285 PF00717 Peptidase S24-like C2U40_14290 PF11799 impB/mucB/samB family C-terminal domain C2U40_14290 PF00817 impB/mucB/samB family C2U40_14290 PF13438 Domain of unknown function (DUF4113) C2U40_14290 PF11798 IMS family HHH motif C2U40_14300 PF00083 Sugar (and other) transporter C2U40_14305 PF17128 Domain of unknown function (DUF5107) C2U40_14305 PF13181 Tetratricopeptide repeat C2U40_14310 PF00480 ROK family C2U40_14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_14315 PF03466 LysR substrate binding domain C2U40_14320 PF00291 Pyridoxal-phosphate dependent enzyme C2U40_14330 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_14330 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_14330 PF01610 Transposase C2U40_14335 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U40_14340 PF12833 Helix-turn-helix domain C2U40_14345 PF01238 Phosphomannose isomerase type I C2U40_14375 PF00155 Aminotransferase class I and II C2U40_14380 PF02378 Phosphotransferase system, EIIC C2U40_14380 PF00367 phosphotransferase system, EIIB C2U40_14385 PF00356 Bacterial regulatory proteins, lacI family C2U40_14385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U40_14420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U40_14420 PF02378 Phosphotransferase system, EIIC C2U40_14420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U40_14425 PF09013 YopH, N-terminal C2U40_14435 PF07690 Major Facilitator Superfamily C2U40_14440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U40_14450 PF00849 RNA pseudouridylate synthase C2U40_14455 PF00293 NUDIX domain C2U40_14465 PF04356 Protein of unknown function (DUF489) C2U40_14470 PF00206 Lyase C2U40_14470 PF08328 Adenylosuccinate lyase C-terminal C2U40_14475 PF08007 Cupin superfamily protein C2U40_14485 PF13508 Acetyltransferase (GNAT) domain C2U40_14495 PF02798 Glutathione S-transferase, N-terminal domain C2U40_14500 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C2U40_14500 PF01243 Pyridoxamine 5'-phosphate oxidase C2U40_14515 PF01189 16S rRNA methyltransferase RsmB/F C2U40_14515 PF01029 NusB family C2U40_14520 PF00462 Glutaredoxin C2U40_14525 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2U40_14525 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2U40_14530 PF04333 MlaA lipoprotein C2U40_14535 PF03918 Cytochrome C biogenesis protein C2U40_14540 PF03918 Cytochrome C biogenesis protein C2U40_14545 PF08534 Redoxin C2U40_14550 PF01578 Cytochrome C assembly protein C2U40_14550 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C2U40_14555 PF03100 CcmE C2U40_14560 PF04995 Heme exporter protein D (CcmD) C2U40_14565 PF01578 Cytochrome C assembly protein C2U40_14570 PF03379 CcmB protein C2U40_14575 PF00005 ABC transporter C2U40_14585 PF01584 CheW-like domain C2U40_14595 PF13614 AAA domain C2U40_14600 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U40_14600 PF00691 OmpA family C2U40_14605 PF01618 MotA/TolQ/ExbB proton channel family C2U40_14610 PF00072 Response regulator receiver domain C2U40_14610 PF01339 CheB methylesterase C2U40_14615 PF01627 Hpt domain C2U40_14615 PF07194 P2 response regulator binding domain C2U40_14615 PF01584 CheW-like domain C2U40_14615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_14615 PF02895 Signal transducing histidine kinase, homodimeric domain C2U40_14620 PF04344 Chemotaxis phosphatase, CheZ C2U40_14625 PF00072 Response regulator receiver domain C2U40_14630 PF04542 Sigma-70 region 2 C2U40_14630 PF04539 Sigma-70 region 3 C2U40_14630 PF04545 Sigma-70, region 4 C2U40_14635 PF10609 NUBPL iron-transfer P-loop NTPase C2U40_14640 PF00448 SRP54-type protein, GTPase domain C2U40_14645 PF00771 FHIPEP family C2U40_14650 PF01312 FlhB HrpN YscU SpaS Family C2U40_14655 PF01311 Bacterial export proteins, family 1 C2U40_14660 PF01313 Bacterial export proteins, family 3 C2U40_14665 PF00813 FliP family C2U40_14670 PF04347 Flagellar biosynthesis protein, FliO C2U40_14675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U40_14680 PF02154 Flagellar motor switch protein FliM C2U40_14680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U40_14700 PF18269 T3SS EscN ATPase C-terminal domain C2U40_14700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U40_14710 PF14841 FliG middle domain C2U40_14710 PF14842 FliG N-terminal domain C2U40_14710 PF01706 FliG C-terminal domain C2U40_14715 PF08345 Flagellar M-ring protein C-terminal C2U40_14715 PF01514 Secretory protein of YscJ/FliF family C2U40_14720 PF02049 Flagellar hook-basal body complex protein FliE C2U40_14730 PF00072 Response regulator receiver domain C2U40_14735 PF04055 Radical SAM superfamily C2U40_14735 PF18693 TRAM domain C2U40_14735 PF00919 Uncharacterized protein family UPF0004 C2U40_14740 PF00486 Transcriptional regulatory protein, C terminal C2U40_14740 PF00072 Response regulator receiver domain C2U40_14750 PF02685 Glucokinase C2U40_14755 PF01418 Helix-turn-helix domain, rpiR family C2U40_14755 PF01380 SIS domain C2U40_14760 PF00224 Pyruvate kinase, barrel domain C2U40_14760 PF02887 Pyruvate kinase, alpha/beta domain C2U40_14765 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_14765 PF01610 Transposase C2U40_14765 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_14775 PF00873 AcrB/AcrD/AcrF family C2U40_14780 PF09317 Domain of unknown function (DUF1974) C2U40_14780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U40_14780 PF02770 Acyl-CoA dehydrogenase, middle domain C2U40_14780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U40_14785 PF00440 Bacterial regulatory proteins, tetR family C2U40_14810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U40_14810 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_14825 PF02001 Protein of unknown function DUF134 C2U40_14835 PF01327 Polypeptide deformylase C2U40_14840 PF01695 IstB-like ATP binding protein C2U40_14845 PF00665 Integrase core domain C2U40_14850 PF01327 Polypeptide deformylase C2U40_14875 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_14875 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_14875 PF01610 Transposase C2U40_14910 PF03781 Sulfatase-modifying factor enzyme 1 C2U40_14920 PF00005 ABC transporter C2U40_14950 PF02342 TerD domain C2U40_14975 PF00384 Molybdopterin oxidoreductase C2U40_14980 PF02634 FdhD/NarQ family C2U40_14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_14985 PF03466 LysR substrate binding domain C2U40_14995 PF03734 L,D-transpeptidase catalytic domain C2U40_14995 PF17969 L,D-transpeptidase C-terminal domain C2U40_14995 PF01476 LysM domain C2U40_15010 PF05971 RNA methyltransferase C2U40_15015 PF00877 NlpC/P60 family C2U40_15020 PF01648 4'-phosphopantetheinyl transferase superfamily C2U40_15025 PF00085 Thioredoxin C2U40_15035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C2U40_15040 PF01842 ACT domain C2U40_15040 PF00551 Formyl transferase C2U40_15050 PF13091 PLD-like domain C2U40_15050 PF13396 Phospholipase_D-nuclease N-terminal C2U40_15065 PF01551 Peptidase family M23 C2U40_15070 PF00128 Alpha amylase, catalytic domain C2U40_15075 PF10145 Phage-related minor tail protein C2U40_15075 PF01464 Transglycosylase SLT domain C2U40_15075 PF01551 Peptidase family M23 C2U40_15080 PF00230 Major intrinsic protein C2U40_15085 PF02075 Crossover junction endodeoxyribonuclease RuvC C2U40_15095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U40_15125 PF11842 Domain of unknown function (DUF3362) C2U40_15125 PF08497 Radical SAM N-terminal C2U40_15125 PF04055 Radical SAM superfamily C2U40_15135 PF00873 AcrB/AcrD/AcrF family C2U40_15140 PF00529 HlyD membrane-fusion protein of T1SS C2U40_15140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_15145 PF00990 Diguanylate cyclase, GGDEF domain C2U40_15150 PF01734 Patatin-like phospholipase C2U40_15155 PF00209 Sodium:neurotransmitter symporter family C2U40_15160 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_15160 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_15160 PF01610 Transposase C2U40_15175 PF01389 OmpA-like transmembrane domain C2U40_15175 PF00691 OmpA family C2U40_15180 PF00691 OmpA family C2U40_15180 PF01389 OmpA-like transmembrane domain C2U40_15185 PF00691 OmpA family C2U40_15185 PF01389 OmpA-like transmembrane domain C2U40_15190 PF03949 Malic enzyme, NAD binding domain C2U40_15190 PF00390 Malic enzyme, N-terminal domain C2U40_15195 PF12833 Helix-turn-helix domain C2U40_15200 PF01554 MatE C2U40_15205 PF10692 Protein of unknown function (DUF2498) C2U40_15210 PF00990 Diguanylate cyclase, GGDEF domain C2U40_15210 PF00072 Response regulator receiver domain C2U40_15215 PF00860 Permease family C2U40_15225 PF01235 Sodium:alanine symporter family C2U40_15230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U40_15230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2U40_15235 PF01699 Sodium/calcium exchanger protein C2U40_15240 PF08534 Redoxin C2U40_15250 PF00293 NUDIX domain C2U40_15270 PF00005 ABC transporter C2U40_15275 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_15275 PF01610 Transposase C2U40_15275 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_15280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U40_15280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U40_15290 PF03932 CutC family C2U40_15295 PF00480 ROK family C2U40_15305 PF01435 Peptidase family M48 C2U40_15310 PF12849 PBP superfamily domain C2U40_15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_15315 PF11808 Phosphate regulon sensor protein PhoR C2U40_15315 PF00512 His Kinase A (phospho-acceptor) domain C2U40_15315 PF00989 PAS fold C2U40_15320 PF00072 Response regulator receiver domain C2U40_15320 PF00486 Transcriptional regulatory protein, C terminal C2U40_15325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U40_15330 PF02515 CoA-transferase family III C2U40_15335 PF02770 Acyl-CoA dehydrogenase, middle domain C2U40_15335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U40_15335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U40_15340 PF02954 Bacterial regulatory protein, Fis family C2U40_15340 PF00158 Sigma-54 interaction domain C2U40_15340 PF01590 GAF domain C2U40_15345 PF00171 Aldehyde dehydrogenase family C2U40_15355 PF00892 EamA-like transporter family C2U40_15365 PF12431 Transcriptional regulator C2U40_15365 PF00072 Response regulator receiver domain C2U40_15370 PF00989 PAS fold C2U40_15370 PF17203 Single cache domain 3 C2U40_15370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_15370 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C2U40_15375 PF03949 Malic enzyme, NAD binding domain C2U40_15375 PF00390 Malic enzyme, N-terminal domain C2U40_15380 PF03390 2-hydroxycarboxylate transporter family C2U40_15390 PF01047 MarR family C2U40_15395 PF00529 HlyD membrane-fusion protein of T1SS C2U40_15395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_15420 PF01679 Proteolipid membrane potential modulator C2U40_15430 PF03477 ATP cone domain C2U40_15430 PF13597 Anaerobic ribonucleoside-triphosphate reductase C2U40_15440 PF12826 Helix-hairpin-helix motif C2U40_15440 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C2U40_15440 PF03120 NAD-dependent DNA ligase OB-fold domain C2U40_15440 PF01653 NAD-dependent DNA ligase adenylation domain C2U40_15440 PF00533 BRCA1 C Terminus (BRCT) domain C2U40_15445 PF04354 ZipA, C-terminal FtsZ-binding domain C2U40_15450 PF02463 RecF/RecN/SMC N terminal domain C2U40_15450 PF06470 SMC proteins Flexible Hinge Domain C2U40_15460 PF03458 UPF0126 domain C2U40_15470 PF05951 Bacterial protein of unknown function (DUF882) C2U40_15475 PF01471 Putative peptidoglycan binding domain C2U40_15475 PF03734 L,D-transpeptidase catalytic domain C2U40_15490 PF00535 Glycosyl transferase family 2 C2U40_15505 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_15505 PF01610 Transposase C2U40_15505 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_15510 PF00128 Alpha amylase, catalytic domain C2U40_15520 PF00196 Bacterial regulatory proteins, luxR family C2U40_15520 PF00072 Response regulator receiver domain C2U40_15540 PF00999 Sodium/hydrogen exchanger family C2U40_15540 PF02080 TrkA-C domain C2U40_15540 PF02254 TrkA-N domain C2U40_15545 PF00990 Diguanylate cyclase, GGDEF domain C2U40_15550 PF01171 PP-loop family C2U40_15550 PF09179 TilS substrate binding domain C2U40_15550 PF11734 TilS substrate C-terminal domain C2U40_15555 PF01431 Peptidase family M13 C2U40_15555 PF05649 Peptidase family M13 C2U40_15565 PF12848 ABC transporter C2U40_15565 PF16326 ABC transporter C-terminal domain C2U40_15565 PF00005 ABC transporter C2U40_15575 PF13520 Amino acid permease C2U40_15580 PF03466 LysR substrate binding domain C2U40_15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_15585 PF12706 Beta-lactamase superfamily domain C2U40_15595 PF03466 LysR substrate binding domain C2U40_15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_15605 PF08543 Phosphomethylpyrimidine kinase C2U40_15610 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C2U40_15610 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C2U40_15610 PF01276 Orn/Lys/Arg decarboxylase, major domain C2U40_15615 PF13520 Amino acid permease C2U40_15620 PF00486 Transcriptional regulatory protein, C terminal C2U40_15620 PF18500 CadC C-terminal domain 1 C2U40_15625 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C2U40_15630 PF01336 OB-fold nucleic acid binding domain C2U40_15630 PF02811 PHP domain C2U40_15630 PF14579 Helix-hairpin-helix motif C2U40_15630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C2U40_15630 PF07733 Bacterial DNA polymerase III alpha NTPase domain C2U40_15635 PF01351 Ribonuclease HII C2U40_15640 PF02684 Lipid-A-disaccharide synthetase C2U40_15645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C2U40_15645 PF00132 Bacterial transferase hexapeptide (six repeats) C2U40_15650 PF07977 FabA-like domain C2U40_15655 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C2U40_15655 PF00132 Bacterial transferase hexapeptide (six repeats) C2U40_15660 PF03938 Outer membrane protein (OmpH-like) C2U40_15665 PF01103 Surface antigen C2U40_15665 PF07244 Surface antigen variable number repeat C2U40_15670 PF17820 PDZ domain C2U40_15670 PF02163 Peptidase family M50 C2U40_15675 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C2U40_15675 PF13288 DXP reductoisomerase C-terminal domain C2U40_15675 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C2U40_15685 PF01255 Putative undecaprenyl diphosphate synthase C2U40_15690 PF01765 Ribosome recycling factor C2U40_15695 PF00696 Amino acid kinase family C2U40_15700 PF00889 Elongation factor TS C2U40_15705 PF00318 Ribosomal protein S2 C2U40_15710 PF00557 Metallopeptidase family M24 C2U40_15715 PF01909 Nucleotidyltransferase domain C2U40_15715 PF01966 HD domain C2U40_15715 PF01842 ACT domain C2U40_15715 PF08335 GlnD PII-uridylyltransferase C2U40_15720 PF00132 Bacterial transferase hexapeptide (six repeats) C2U40_15720 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C2U40_15720 PF14602 Hexapeptide repeat of succinyl-transferase C2U40_15725 PF11944 Protein of unknown function (DUF3461) C2U40_15730 PF02378 Phosphotransferase system, EIIC C2U40_15730 PF00367 phosphotransferase system, EIIB C2U40_15735 PF07148 Maltose operon periplasmic protein precursor (MalM) C2U40_15740 PF02264 LamB porin C2U40_15745 PF00258 Flavodoxin C2U40_15750 PF00849 RNA pseudouridylate synthase C2U40_15755 PF04287 tRNA pseudouridine synthase C C2U40_15780 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C2U40_15785 PF07348 Syd protein (SUKH-2) C2U40_15790 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C2U40_15790 PF14489 QueF-like protein C2U40_15800 PF00990 Diguanylate cyclase, GGDEF domain C2U40_15800 PF07694 5TMR of 5TMR-LYT C2U40_15805 PF03641 Possible lysine decarboxylase C2U40_15805 PF11892 Domain of unknown function (DUF3412) C2U40_15805 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C2U40_15810 PF01367 5'-3' exonuclease, C-terminal SAM fold C2U40_15810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2U40_15815 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U40_15815 PF18324 Hypothetical protein TT1725 C2U40_15825 PF01728 FtsJ-like methyltransferase C2U40_15825 PF18125 RlmM ferredoxin-like domain C2U40_15830 PF04241 Protein of unknown function (DUF423) C2U40_15840 PF03466 LysR substrate binding domain C2U40_15840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_15845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_15845 PF00672 HAMP domain C2U40_15850 PF00817 impB/mucB/samB family C2U40_15850 PF11798 IMS family HHH motif C2U40_15850 PF11799 impB/mucB/samB family C-terminal domain C2U40_15865 PF02424 ApbE family C2U40_15870 PF00175 Oxidoreductase NAD-binding domain C2U40_15870 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U40_15870 PF00970 Oxidoreductase FAD-binding domain C2U40_15875 PF02508 Rnf-Nqr subunit, membrane protein C2U40_15880 PF02508 Rnf-Nqr subunit, membrane protein C2U40_15885 PF04205 FMN-binding domain C2U40_15890 PF03116 NQR2, RnfD, RnfE family C2U40_15895 PF11973 NQRA C-terminal domain C2U40_15895 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C2U40_15900 PF01722 BolA-like protein C2U40_15905 PF05175 Methyltransferase small domain C2U40_15915 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2U40_15925 PF07690 Major Facilitator Superfamily C2U40_15930 PF03502 Nucleoside-specific channel-forming protein, Tsx C2U40_15935 PF04461 Protein of unknown function (DUF520) C2U40_15940 PF02558 Ketopantoate reductase PanE/ApbA C2U40_15940 PF08546 Ketopantoate reductase PanE/ApbA C terminal C2U40_15945 PF01965 DJ-1/PfpI family C2U40_15950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U40_15950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U40_15950 PF00205 Thiamine pyrophosphate enzyme, central domain C2U40_15955 PF03306 Alpha-acetolactate decarboxylase C2U40_15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_15960 PF03466 LysR substrate binding domain C2U40_15990 PF04717 Type VI secretion system, phage-baseplate injector C2U40_16000 PF05638 Type VI secretion system effector, Hcp C2U40_16005 PF00196 Bacterial regulatory proteins, luxR family C2U40_16005 PF03472 Autoinducer binding domain C2U40_16020 PF04829 Pre-toxin domain with VENN motif C2U40_16020 PF05860 haemagglutination activity domain C2U40_16020 PF13332 Hemagglutinin repeat C2U40_16020 PF15605 Bacterial toxin 28 C2U40_16055 PF13332 Hemagglutinin repeat C2U40_16055 PF05860 haemagglutination activity domain C2U40_16055 PF04829 Pre-toxin domain with VENN motif C2U40_16055 PF05860 haemagglutination activity domain C2U40_16055 PF13332 Hemagglutinin repeat C2U40_16055 PF05594 Haemagluttinin repeat C2U40_16055 PF04829 Pre-toxin domain with VENN motif C2U40_16055 PF05594 Haemagluttinin repeat C2U40_16055 PF14436 Bacterial EndoU nuclease C2U40_16055 PF14436 Bacterial EndoU nuclease C2U40_16060 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C2U40_16060 PF17287 POTRA domain C2U40_16060 PF08479 POTRA domain, ShlB-type C2U40_16075 PF13462 Thioredoxin C2U40_16075 PF06965 Na+/H+ antiporter 1 C2U40_16080 PF16363 GDP-mannose 4,6 dehydratase C2U40_16085 PF00042 Globin C2U40_16085 PF00175 Oxidoreductase NAD-binding domain C2U40_16085 PF00970 Oxidoreductase FAD-binding domain C2U40_16090 PF03063 Prismane/CO dehydrogenase family C2U40_16095 PF00210 Ferritin-like domain C2U40_16135 PF00106 short chain dehydrogenase C2U40_16145 PF00875 DNA photolyase C2U40_16145 PF03441 FAD binding domain of DNA photolyase C2U40_16295 PF06183 DinI-like family C2U40_16385 PF13401 AAA domain C2U40_16385 PF09077 Mu B transposition protein, C terminal C2U40_16410 PF08349 Protein of unknown function (DUF1722) C2U40_16440 PF00800 Prephenate dehydratase C2U40_16440 PF01817 Chorismate mutase type II C2U40_16470 PF09588 YqaJ-like viral recombinase domain C2U40_16480 PF00239 Resolvase, N terminal domain C2U40_16480 PF02796 Helix-turn-helix domain of resolvase C2U40_16500 PF02384 N-6 DNA Methylase C2U40_16540 PF04002 RadC-like JAB domain C2U40_16580 PF02463 RecF/RecN/SMC N terminal domain C2U40_16615 PF02661 Fic/DOC family C2U40_16615 PF13784 Fic/DOC family N-terminal C2U40_16635 PF03976 Polyphosphate kinase 2 (PPK2) C2U40_16640 PF01740 STAS domain C2U40_16640 PF00916 Sulfate permease family C2U40_16645 PF07995 Glucose / Sorbosone dehydrogenase C2U40_16655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_16660 PF03573 outer membrane porin, OprD family C2U40_16665 PF00106 short chain dehydrogenase C2U40_16690 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C2U40_16700 PF06029 AlkA N-terminal domain C2U40_16700 PF12833 Helix-turn-helix domain C2U40_16700 PF02805 Metal binding domain of Ada C2U40_16700 PF00730 HhH-GPD superfamily base excision DNA repair protein C2U40_16705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2U40_16705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2U40_16720 PF01609 Transposase DDE domain C2U40_16725 PF12392 Collagenase C2U40_16725 PF01136 Peptidase family U32 C2U40_16730 PF01810 LysE type translocator C2U40_16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_16735 PF03466 LysR substrate binding domain C2U40_16745 PF00672 HAMP domain C2U40_16745 PF02743 Cache domain C2U40_16745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_16750 PF00072 Response regulator receiver domain C2U40_16760 PF07194 P2 response regulator binding domain C2U40_16760 PF01627 Hpt domain C2U40_16760 PF02895 Signal transducing histidine kinase, homodimeric domain C2U40_16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_16760 PF01584 CheW-like domain C2U40_16765 PF12729 Four helix bundle sensory module for signal transduction C2U40_16765 PF00672 HAMP domain C2U40_16765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_16770 PF01584 CheW-like domain C2U40_16775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_16775 PF02203 Tar ligand binding domain homologue C2U40_16775 PF00672 HAMP domain C2U40_16780 PF01739 CheR methyltransferase, SAM binding domain C2U40_16780 PF03705 CheR methyltransferase, all-alpha domain C2U40_16785 PF03975 CheD chemotactic sensory transduction C2U40_16790 PF01339 CheB methylesterase C2U40_16790 PF00072 Response regulator receiver domain C2U40_16795 PF00266 Aminotransferase class-V C2U40_16820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U40_16820 PF00072 Response regulator receiver domain C2U40_16820 PF01627 Hpt domain C2U40_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_16820 PF00672 HAMP domain C2U40_16820 PF00512 His Kinase A (phospho-acceptor) domain C2U40_16825 PF00072 Response regulator receiver domain C2U40_16825 PF00196 Bacterial regulatory proteins, luxR family C2U40_16835 PF16967 E-set like domain C2U40_16835 PF15976 CS1-pili formation C-terminal C2U40_16850 PF00990 Diguanylate cyclase, GGDEF domain C2U40_16850 PF00563 EAL domain C2U40_16850 PF01590 GAF domain C2U40_16850 PF00989 PAS fold C2U40_16860 PF12838 4Fe-4S dicluster domain C2U40_16870 PF00842 Alanine racemase, C-terminal domain C2U40_16870 PF01168 Alanine racemase, N-terminal domain C2U40_16875 PF03796 DnaB-like helicase C terminal domain C2U40_16875 PF00772 DnaB-like helicase N terminal domain C2U40_16890 PF12792 CSS motif domain associated with EAL C2U40_16890 PF00563 EAL domain C2U40_16895 PF02872 5'-nucleotidase, C-terminal domain C2U40_16895 PF00149 Calcineurin-like phosphoesterase C2U40_16915 PF00158 Sigma-54 interaction domain C2U40_16915 PF02954 Bacterial regulatory protein, Fis family C2U40_16915 PF00072 Response regulator receiver domain C2U40_16920 PF13006 Insertion element 4 transposase N-terminal C2U40_16920 PF01609 Transposase DDE domain C2U40_16925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U40_16925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U40_16935 PF04102 SlyX C2U40_16940 PF01609 Transposase DDE domain C2U40_16940 PF13006 Insertion element 4 transposase N-terminal C2U40_16945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U40_16950 PF09526 Probable metal-binding protein (DUF2387) C2U40_16960 PF01584 CheW-like domain C2U40_16960 PF00072 Response regulator receiver domain C2U40_16965 PF00561 alpha/beta hydrolase fold C2U40_16970 PF00563 EAL domain C2U40_16970 PF01590 GAF domain C2U40_16970 PF00990 Diguanylate cyclase, GGDEF domain C2U40_16970 PF00360 Phytochrome region C2U40_16975 PF06794 Uncharacterised protein family (UPF0270) C2U40_16980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2U40_16980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2U40_16980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2U40_16985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2U40_16990 PF00535 Glycosyl transferase family 2 C2U40_16995 PF00551 Formyl transferase C2U40_16995 PF01370 NAD dependent epimerase/dehydratase family C2U40_16995 PF02911 Formyl transferase, C-terminal domain C2U40_17000 PF01522 Polysaccharide deacetylase C2U40_17005 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C2U40_17010 PF00892 EamA-like transporter family C2U40_17015 PF00893 Small Multidrug Resistance protein C2U40_17020 PF00485 Phosphoribulokinase / Uridine kinase family C2U40_17035 PF02566 OsmC-like protein C2U40_17040 PF00027 Cyclic nucleotide-binding domain C2U40_17040 PF13545 Crp-like helix-turn-helix domain C2U40_17045 PF13847 Methyltransferase domain C2U40_17050 PF18416 N-acetylglucosamine binding protein domain 2 C2U40_17050 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C2U40_17055 PF17945 Beta/Gamma crystallin C2U40_17055 PF12561 ToxR activated gene A lipoprotein domain C2U40_17060 PF00704 Glycosyl hydrolases family 18 C2U40_17060 PF08329 Chitinase A, N-terminal domain C2U40_17065 PF00989 PAS fold C2U40_17065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_17065 PF00512 His Kinase A (phospho-acceptor) domain C2U40_17075 PF13443 Cro/C1-type HTH DNA-binding domain C2U40_17080 PF12832 MFS_1 like family C2U40_17090 PF00593 TonB dependent receptor C2U40_17090 PF07715 TonB-dependent Receptor Plug Domain C2U40_17110 PF01243 Pyridoxamine 5'-phosphate oxidase C2U40_17115 PF06228 Haem utilisation ChuX/HutX C2U40_17125 PF01032 FecCD transport family C2U40_17130 PF00005 ABC transporter C2U40_17140 PF01370 NAD dependent epimerase/dehydratase family C2U40_17150 PF01791 DeoC/LacD family aldolase C2U40_17155 PF07662 Na+ dependent nucleoside transporter C-terminus C2U40_17155 PF07670 Nucleoside recognition C2U40_17155 PF01773 Na+ dependent nucleoside transporter N-terminus C2U40_17160 PF01048 Phosphorylase superfamily C2U40_17165 PF03466 LysR substrate binding domain C2U40_17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_17180 PF01464 Transglycosylase SLT domain C2U40_17185 PF01048 Phosphorylase superfamily C2U40_17205 PF12848 ABC transporter C2U40_17205 PF00005 ABC transporter C2U40_17215 PF00860 Permease family C2U40_17220 PF05099 Tellurite resistance protein TerB C2U40_17220 PF00226 DnaJ domain C2U40_17225 PF00483 Nucleotidyl transferase C2U40_17230 PF01636 Phosphotransferase enzyme family C2U40_17235 PF04453 LPS transport system D C2U40_17235 PF03968 OstA-like protein C2U40_17240 PF00639 PPIC-type PPIASE domain C2U40_17240 PF09312 SurA N-terminal domain C2U40_17245 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C2U40_17250 PF00398 Ribosomal RNA adenine dimethylase C2U40_17255 PF04379 ApaG domain C2U40_17260 PF00149 Calcineurin-like phosphoesterase C2U40_17265 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_17265 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_17265 PF01610 Transposase C2U40_17275 PF00296 Luciferase-like monooxygenase C2U40_17295 PF00501 AMP-binding enzyme C2U40_17295 PF13193 AMP-binding enzyme C-terminal domain C2U40_17305 PF01926 50S ribosome-binding GTPase C2U40_17305 PF01018 GTP1/OBG C2U40_17310 PF01016 Ribosomal L27 protein C2U40_17315 PF00829 Ribosomal prokaryotic L21 protein C2U40_17320 PF00348 Polyprenyl synthetase C2U40_17325 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C2U40_17330 PF01145 SPFH domain / Band 7 family C2U40_17335 PF12221 Bacterial membrane protein N terminal C2U40_17335 PF01145 SPFH domain / Band 7 family C2U40_17340 PF16360 GTP-binding GTPase Middle Region C2U40_17340 PF01926 50S ribosome-binding GTPase C2U40_17340 PF13167 GTP-binding GTPase N-terminal C2U40_17345 PF17209 Hfq protein C2U40_17355 PF01119 DNA mismatch repair protein, C-terminal domain C2U40_17355 PF08676 MutL C terminal dimerisation domain C2U40_17360 PF01520 N-acetylmuramoyl-L-alanine amidase C2U40_17365 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C2U40_17370 PF01256 Carbohydrate kinase C2U40_17370 PF03853 YjeF-related protein N-terminus C2U40_17375 PF08331 Domain of unknown function (DUF1730) C2U40_17380 PF00480 ROK family C2U40_17390 PF09383 NIL domain C2U40_17390 PF00005 ABC transporter C2U40_17395 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_17400 PF03180 NLPA lipoprotein C2U40_17405 PF02357 Transcription termination factor nusG C2U40_17410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_17410 PF12729 Four helix bundle sensory module for signal transduction C2U40_17410 PF00672 HAMP domain C2U40_17415 PF00990 Diguanylate cyclase, GGDEF domain C2U40_17415 PF00563 EAL domain C2U40_17415 PF03707 Bacterial signalling protein N terminal repeat C2U40_17420 PF00072 Response regulator receiver domain C2U40_17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_17420 PF00512 His Kinase A (phospho-acceptor) domain C2U40_17420 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U40_17430 PF01966 HD domain C2U40_17430 PF13286 Phosphohydrolase-associated domain C2U40_17435 PF01627 Hpt domain C2U40_17435 PF00989 PAS fold C2U40_17435 PF00512 His Kinase A (phospho-acceptor) domain C2U40_17435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_17435 PF00072 Response regulator receiver domain C2U40_17435 PF18415 Histidine kinase receptor ArcB trans-membrane domain C2U40_17455 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C2U40_17460 PF03466 LysR substrate binding domain C2U40_17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_17470 PF01259 SAICAR synthetase C2U40_17475 PF06804 NlpB/DapX lipoprotein C2U40_17480 PF00701 Dihydrodipicolinate synthetase family C2U40_17485 PF01842 ACT domain C2U40_17490 PF00578 AhpC/TSA family C2U40_17495 PF03887 YfbU domain C2U40_17500 PF04217 Protein of unknown function, DUF412 C2U40_17505 PF00871 Acetokinase family C2U40_17510 PF07085 DRTGG domain C2U40_17510 PF01515 Phosphate acetyl/butaryl transferase C2U40_17515 PF10369 Small subunit of acetolactate synthase C2U40_17525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U40_17525 PF00205 Thiamine pyrophosphate enzyme, central domain C2U40_17525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U40_17535 PF03033 Glycosyltransferase family 28 N-terminal domain C2U40_17535 PF04101 Glycosyltransferase family 28 C-terminal domain C2U40_17540 PF01569 PAP2 superfamily C2U40_17550 PF00682 HMGL-like C2U40_17550 PF08502 LeuA allosteric (dimerisation) domain C2U40_17555 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U40_17560 PF00330 Aconitase family (aconitate hydratase) C2U40_17565 PF00694 Aconitase C-terminal domain C2U40_17585 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_17590 PF00005 ABC transporter C2U40_17595 PF02562 PhoH-like protein C2U40_17595 PF13638 PIN domain C2U40_17605 PF02867 Ribonucleotide reductase, barrel domain C2U40_17605 PF00317 Ribonucleotide reductase, all-alpha domain C2U40_17605 PF08343 Ribonucleotide reductase N-terminal C2U40_17635 PF01521 Iron-sulphur cluster biosynthesis C2U40_17645 PF00654 Voltage gated chloride channel C2U40_17650 PF00202 Aminotransferase class-III C2U40_17665 PF01569 PAP2 superfamily C2U40_17670 PF01610 Transposase C2U40_17670 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_17670 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_17680 PF11849 Domain of unknown function (DUF3369) C2U40_17690 PF00893 Small Multidrug Resistance protein C2U40_17695 PF00893 Small Multidrug Resistance protein C2U40_17700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U40_17705 PF14814 Bifunctional transglycosylase second domain C2U40_17705 PF00905 Penicillin binding protein transpeptidase domain C2U40_17705 PF00912 Transglycosylase C2U40_17710 PF04408 Helicase associated domain (HA2) C2U40_17710 PF00271 Helicase conserved C-terminal domain C2U40_17710 PF08482 ATP-dependent helicase C-terminal C2U40_17710 PF00270 DEAD/DEAH box helicase C2U40_17720 PF03749 Sugar fermentation stimulation protein RE domain C2U40_17720 PF17746 SfsA N-terminal OB domain C2U40_17725 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2U40_17730 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U40_17735 PF01743 Poly A polymerase head domain C2U40_17735 PF12626 Polymerase A arginine-rich C-terminus C2U40_17735 PF12627 Probable RNA and SrmB- binding site of polymerase A C2U40_17740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2U40_17745 PF02548 Ketopantoate hydroxymethyltransferase C2U40_17750 PF02569 Pantoate-beta-alanine ligase C2U40_17770 PF01869 BadF/BadG/BcrA/BcrD ATPase family C2U40_17775 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C2U40_17780 PF01061 ABC-2 type transporter C2U40_17785 PF00005 ABC transporter C2U40_17790 PF00156 Phosphoribosyl transferase domain C2U40_17795 PF00440 Bacterial regulatory proteins, tetR family C2U40_17800 PF02441 Flavoprotein C2U40_17805 PF02875 Mur ligase family, glutamate ligase domain C2U40_17805 PF08245 Mur ligase middle domain C2U40_17805 PF01225 Mur ligase family, catalytic domain C2U40_17810 PF00719 Inorganic pyrophosphatase C2U40_17815 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_17815 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_17815 PF01610 Transposase C2U40_17835 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C2U40_17850 PF00005 ABC transporter C2U40_17870 PF08447 PAS fold C2U40_17870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_17895 PF02080 TrkA-C domain C2U40_17895 PF03600 Citrate transporter C2U40_17900 PF00009 Elongation factor Tu GTP binding domain C2U40_17905 PF01507 Phosphoadenosine phosphosulfate reductase family C2U40_17910 PF14824 Sirohaem biosynthesis protein central C2U40_17910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U40_17910 PF10414 Sirohaem synthase dimerisation region C2U40_17915 PF16200 C-terminal region of band_7 C2U40_17915 PF01145 SPFH domain / Band 7 family C2U40_17920 PF01957 NfeD-like C-terminal, partner-binding C2U40_17925 PF00571 CBS domain C2U40_17925 PF01380 SIS domain C2U40_17930 PF00005 ABC transporter C2U40_17930 PF12848 ABC transporter C2U40_17940 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C2U40_17945 PF03466 LysR substrate binding domain C2U40_17945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_17950 PF02525 Flavodoxin-like fold C2U40_17985 PF00561 alpha/beta hydrolase fold C2U40_17990 PF00474 Sodium:solute symporter family C2U40_17995 PF17969 L,D-transpeptidase C-terminal domain C2U40_17995 PF03734 L,D-transpeptidase catalytic domain C2U40_18000 PF00924 Mechanosensitive ion channel C2U40_18005 PF00871 Acetokinase family C2U40_18010 PF04074 YhcH/YjgK/YiaL C2U40_18020 PF00394 Multicopper oxidase C2U40_18020 PF07731 Multicopper oxidase C2U40_18020 PF07732 Multicopper oxidase C2U40_18025 PF01177 Asp/Glu/Hydantoin racemase C2U40_18030 PF01810 LysE type translocator C2U40_18035 PF00392 Bacterial regulatory proteins, gntR family C2U40_18035 PF00155 Aminotransferase class I and II C2U40_18060 PF00209 Sodium:neurotransmitter symporter family C2U40_18070 PF00209 Sodium:neurotransmitter symporter family C2U40_18090 PF07690 Major Facilitator Superfamily C2U40_18100 PF01037 Lrp/AsnC ligand binding domain C2U40_18115 PF01047 MarR family C2U40_18120 PF02566 OsmC-like protein C2U40_18125 PF16884 N-terminal domain of oxidoreductase C2U40_18125 PF00107 Zinc-binding dehydrogenase C2U40_18130 PF00293 NUDIX domain C2U40_18140 PF01641 SelR domain C2U40_18145 PF00128 Alpha amylase, catalytic domain C2U40_18145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U40_18150 PF00128 Alpha amylase, catalytic domain C2U40_18150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U40_18150 PF02806 Alpha amylase, C-terminal all-beta domain C2U40_18155 PF02446 4-alpha-glucanotransferase C2U40_18160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U40_18160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U40_18165 PF01263 Aldose 1-epimerase C2U40_18170 PF02445 Quinolinate synthetase A protein C2U40_18175 PF00672 HAMP domain C2U40_18175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_18250 PF13174 Tetratricopeptide repeat C2U40_18250 PF16331 TolA binding protein trimerisation C2U40_18255 PF00691 OmpA family C2U40_18260 PF07676 WD40-like Beta Propeller Repeat C2U40_18260 PF04052 TolB amino-terminal domain C2U40_18270 PF02472 Biopolymer transport protein ExbD/TolR C2U40_18275 PF01618 MotA/TolQ/ExbB proton channel family C2U40_18280 PF03061 Thioesterase superfamily C2U40_18285 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C2U40_18290 PF08173 Membrane bound YbgT-like protein C2U40_18295 PF02322 Cytochrome bd terminal oxidase subunit II C2U40_18300 PF01654 Cytochrome bd terminal oxidase subunit I C2U40_18305 PF05496 Holliday junction DNA helicase RuvB P-loop domain C2U40_18305 PF05491 RuvB C-terminal winged helix domain C2U40_18305 PF17864 RuvB AAA lid domain C2U40_18310 PF01330 RuvA N terminal domain C2U40_18310 PF07499 RuvA, C-terminal domain C2U40_18315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_18315 PF00672 HAMP domain C2U40_18320 PF03129 Anticodon binding domain C2U40_18320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U40_18320 PF04073 Aminoacyl-tRNA editing domain C2U40_18325 PF00106 short chain dehydrogenase C2U40_18340 PF00378 Enoyl-CoA hydratase/isomerase C2U40_18345 PF10952 Protein of unknown function (DUF2753) C2U40_18350 PF00132 Bacterial transferase hexapeptide (six repeats) C2U40_18360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U40_18375 PF02594 Uncharacterised ACR, YggU family COG1872 C2U40_18380 PF02325 YGGT family C2U40_18385 PF03807 NADP oxidoreductase coenzyme F420-dependent C2U40_18385 PF14748 Pyrroline-5-carboxylate reductase dimerisation C2U40_18390 PF01168 Alanine racemase, N-terminal domain C2U40_18395 PF00437 Type II/IV secretion system protein C2U40_18400 PF00437 Type II/IV secretion system protein C2U40_18405 PF03883 Peroxide stress protein YaaA C2U40_18410 PF00270 DEAD/DEAH box helicase C2U40_18410 PF00271 Helicase conserved C-terminal domain C2U40_18415 PF05175 Methyltransferase small domain C2U40_18420 PF05525 Branched-chain amino acid transport protein C2U40_18425 PF05525 Branched-chain amino acid transport protein C2U40_18440 PF01475 Ferric uptake regulator family C2U40_18445 PF01207 Dihydrouridine synthase (Dus) C2U40_18460 PF00216 Bacterial DNA-binding protein C2U40_18465 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C2U40_18470 PF07238 PilZ domain C2U40_18475 PF18073 Rubredoxin metal binding domain C2U40_18490 PF18429 Domain of unknown function (DUF5609) C2U40_18500 PF13426 PAS domain C2U40_18500 PF08447 PAS fold C2U40_18500 PF08448 PAS fold C2U40_18500 PF05231 MASE1 C2U40_18500 PF00990 Diguanylate cyclase, GGDEF domain C2U40_18500 PF00563 EAL domain C2U40_18505 PF01048 Phosphorylase superfamily C2U40_18510 PF01676 Metalloenzyme superfamily C2U40_18515 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C2U40_18515 PF00591 Glycosyl transferase family, a/b domain C2U40_18515 PF02885 Glycosyl transferase family, helical bundle domain C2U40_18520 PF01791 DeoC/LacD family aldolase C2U40_18530 PF01773 Na+ dependent nucleoside transporter N-terminus C2U40_18530 PF07670 Nucleoside recognition C2U40_18530 PF07662 Na+ dependent nucleoside transporter C-terminus C2U40_18535 PF01026 TatD related DNase C2U40_18540 PF00114 Pilin (bacterial filament) C2U40_18540 PF07963 Prokaryotic N-terminal methylation motif C2U40_18550 PF05958 tRNA (Uracil-5-)-methyltransferase C2U40_18550 PF01938 TRAM domain C2U40_18555 PF00909 Ammonium Transporter Family C2U40_18560 PF00589 Phage integrase family C2U40_18560 PF02899 Phage integrase, N-terminal SAM-like domain C2U40_18570 PF01381 Helix-turn-helix C2U40_18650 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system C2U40_18655 PF01381 Helix-turn-helix C2U40_18720 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2U40_18800 PF03739 Lipopolysaccharide export system permease LptF/LptG C2U40_18805 PF03739 Lipopolysaccharide export system permease LptF/LptG C2U40_18810 PF02789 Cytosol aminopeptidase family, N-terminal domain C2U40_18810 PF00883 Cytosol aminopeptidase family, catalytic domain C2U40_18815 PF04364 DNA polymerase III chi subunit, HolC C2U40_18820 PF10458 Valyl tRNA synthetase tRNA binding arm C2U40_18820 PF00133 tRNA synthetases class I (I, L, M and V) C2U40_18820 PF08264 Anticodon-binding domain of tRNA C2U40_18825 PF00571 CBS domain C2U40_18825 PF01595 Cyclin M transmembrane N-terminal domain C2U40_18825 PF03471 Transporter associated domain C2U40_18830 PF09335 SNARE associated Golgi protein C2U40_18835 PF00768 D-alanyl-D-alanine carboxypeptidase C2U40_18870 PF02599 Global regulator protein family C2U40_18875 PF13840 ACT domain C2U40_18875 PF01842 ACT domain C2U40_18875 PF00696 Amino acid kinase family C2U40_18880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2U40_18880 PF01411 tRNA synthetases class II (A) C2U40_18880 PF02272 DHHA1 domain C2U40_18885 PF02631 RecX family C2U40_18890 PF00154 recA bacterial DNA recombination protein C2U40_18895 PF02464 Competence-damaged protein C2U40_18905 PF09588 YqaJ-like viral recombinase domain C2U40_18925 PF04002 RadC-like JAB domain C2U40_18945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C2U40_18945 PF01926 50S ribosome-binding GTPase C2U40_18960 PF01018 GTP1/OBG C2U40_18960 PF01926 50S ribosome-binding GTPase C2U40_18960 PF09269 Domain of unknown function (DUF1967) C2U40_18980 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U40_18980 PF18766 SWI2/SNF2 ATPase C2U40_18980 PF11867 Domain of unknown function (DUF3387) C2U40_19000 PF12161 HsdM N-terminal domain C2U40_19000 PF02384 N-6 DNA Methylase C2U40_19030 PF13356 Arm DNA-binding domain C2U40_19030 PF00589 Phage integrase family C2U40_19035 PF05192 MutS domain III C2U40_19035 PF00488 MutS domain V C2U40_19035 PF05190 MutS family domain IV C2U40_19035 PF05188 MutS domain II C2U40_19035 PF01624 MutS domain I C2U40_19040 PF02028 BCCT, betaine/carnitine/choline family transporter C2U40_19055 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_19055 PF01610 Transposase C2U40_19055 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_19060 PF04222 Protein of unknown function (DUF416) C2U40_19065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U40_19070 PF08525 Opacity-associated protein A N-terminal motif C2U40_19070 PF01551 Peptidase family M23 C2U40_19070 PF01476 LysM domain C2U40_19090 PF01297 Zinc-uptake complex component A periplasmic C2U40_19095 PF00005 ABC transporter C2U40_19100 PF00950 ABC 3 transport family C2U40_19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_19105 PF03466 LysR substrate binding domain C2U40_19110 PF00892 EamA-like transporter family C2U40_19115 PF03167 Uracil DNA glycosylase superfamily C2U40_19120 PF00892 EamA-like transporter family C2U40_19130 PF01541 GIY-YIG catalytic domain C2U40_19145 PF04012 PspA/IM30 family C2U40_19150 PF01553 Acyltransferase C2U40_19170 PF00578 AhpC/TSA family C2U40_19175 PF00684 DnaJ central domain C2U40_19175 PF00226 DnaJ domain C2U40_19175 PF01556 DnaJ C terminal domain C2U40_19205 PF00521 DNA gyrase/topoisomerase IV, subunit A C2U40_19205 PF03989 DNA gyrase C-terminal domain, beta-propeller C2U40_19210 PF00204 DNA gyrase B C2U40_19210 PF00986 DNA gyrase B subunit, carboxyl terminus C2U40_19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_19210 PF01751 Toprim domain C2U40_19215 PF04632 Fusaric acid resistance protein family C2U40_19220 PF00529 HlyD membrane-fusion protein of T1SS C2U40_19220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_19225 PF07869 Protein of unknown function (DUF1656) C2U40_19235 PF00293 NUDIX domain C2U40_19240 PF05728 Uncharacterised protein family (UPF0227) C2U40_19245 PF00149 Calcineurin-like phosphoesterase C2U40_19250 PF06853 Protein of unknown function (DUF1249) C2U40_19255 PF00293 NUDIX domain C2U40_19260 PF02321 Outer membrane efflux protein C2U40_19265 PF01467 Cytidylyltransferase-like C2U40_19265 PF00294 pfkB family carbohydrate kinase C2U40_19270 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U40_19285 PF01865 Protein of unknown function DUF47 C2U40_19290 PF01384 Phosphate transporter family C2U40_19295 PF04073 Aminoacyl-tRNA editing domain C2U40_19300 PF07350 Protein of unknown function (DUF1479) C2U40_19320 PF00392 Bacterial regulatory proteins, gntR family C2U40_19320 PF00155 Aminotransferase class I and II C2U40_19325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_19325 PF03466 LysR substrate binding domain C2U40_19330 PF03788 LrgA family C2U40_19335 PF04172 LrgB-like family C2U40_19350 PF01743 Poly A polymerase head domain C2U40_19350 PF12627 Probable RNA and SrmB- binding site of polymerase A C2U40_19350 PF01966 HD domain C2U40_19355 PF13401 AAA domain C2U40_19355 PF01471 Putative peptidoglycan binding domain C2U40_19360 PF16537 Type II secretion system protein B C2U40_19365 PF14815 NUDIX domain C2U40_19365 PF00730 HhH-GPD superfamily base excision DNA repair protein C2U40_19365 PF00633 Helix-hairpin-helix motif C2U40_19365 PF10576 Iron-sulfur binding domain of endonuclease III C2U40_19370 PF04362 Bacterial Fe(2+) trafficking C2U40_19375 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C2U40_19375 PF01464 Transglycosylase SLT domain C2U40_19380 PF04076 Bacterial OB fold (BOF) protein C2U40_19385 PF00657 GDSL-like Lipase/Acylhydrolase C2U40_19395 PF01389 OmpA-like transmembrane domain C2U40_19395 PF00691 OmpA family C2U40_19400 PF03886 ABC-type transport auxiliary lipoprotein component C2U40_19405 PF02470 MlaD protein C2U40_19410 PF04403 Paraquat-inducible protein A C2U40_19415 PF17209 Hfq protein C2U40_19420 PF13419 Haloacid dehalogenase-like hydrolase C2U40_19430 PF00360 Phytochrome region C2U40_19430 PF01590 GAF domain C2U40_19430 PF00563 EAL domain C2U40_19430 PF00990 Diguanylate cyclase, GGDEF domain C2U40_19435 PF00701 Dihydrodipicolinate synthetase family C2U40_19440 PF05175 Methyltransferase small domain C2U40_19440 PF08468 Methyltransferase small domain N-terminal C2U40_19445 PF00483 Nucleotidyl transferase C2U40_19450 PF00534 Glycosyl transferases group 1 C2U40_19450 PF08323 Starch synthase catalytic domain C2U40_19490 PF03553 Na+/H+ antiporter family C2U40_19495 PF03466 LysR substrate binding domain C2U40_19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_19500 PF13416 Bacterial extracellular solute-binding protein C2U40_19505 PF00005 ABC transporter C2U40_19505 PF08402 TOBE domain C2U40_19510 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_19515 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_19520 PF00171 Aldehyde dehydrogenase family C2U40_19525 PF07179 SseB protein N-terminal domain C2U40_19525 PF14581 SseB protein C-terminal domain C2U40_19585 PF00892 EamA-like transporter family C2U40_19590 PF01037 Lrp/AsnC ligand binding domain C2U40_19595 PF14602 Hexapeptide repeat of succinyl-transferase C2U40_19595 PF12464 Maltose acetyltransferase C2U40_19600 PF11941 Domain of unknown function (DUF3459) C2U40_19600 PF00128 Alpha amylase, catalytic domain C2U40_19605 PF00367 phosphotransferase system, EIIB C2U40_19605 PF02378 Phosphotransferase system, EIIC C2U40_19610 PF00356 Bacterial regulatory proteins, lacI family C2U40_19625 PF17763 Glutaminase/Asparaginase C-terminal domain C2U40_19625 PF00710 Asparaginase, N-terminal C2U40_19640 PF02142 MGS-like domain C2U40_19650 PF00210 Ferritin-like domain C2U40_19665 PF05127 Helicase C2U40_19665 PF08351 Domain of unknown function (DUF1726) C2U40_19665 PF17176 tRNA-binding domain C2U40_19665 PF13718 GNAT acetyltransferase 2 C2U40_19675 PF01584 CheW-like domain C2U40_19675 PF00072 Response regulator receiver domain C2U40_19720 PF02660 Glycerol-3-phosphate acyltransferase C2U40_19725 PF02152 Dihydroneopterin aldolase C2U40_19730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2U40_19740 PF07690 Major Facilitator Superfamily C2U40_19745 PF07683 Cobalamin synthesis protein cobW C-terminal domain C2U40_19745 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2U40_19750 PF01565 FAD binding domain C2U40_19750 PF04030 D-arabinono-1,4-lactone oxidase C2U40_19755 PF01810 LysE type translocator C2U40_19760 PF03466 LysR substrate binding domain C2U40_19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_19765 PF12792 CSS motif domain associated with EAL C2U40_19765 PF00563 EAL domain C2U40_19770 PF00330 Aconitase family (aconitate hydratase) C2U40_19770 PF11791 Aconitate B N-terminal domain C2U40_19770 PF06434 Aconitate hydratase 2 N-terminus C2U40_19775 PF01734 Patatin-like phospholipase C2U40_19780 PF12729 Four helix bundle sensory module for signal transduction C2U40_19780 PF00672 HAMP domain C2U40_19780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_19785 PF12729 Four helix bundle sensory module for signal transduction C2U40_19785 PF00672 HAMP domain C2U40_19785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_19795 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_19795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U40_19800 PF00364 Biotin-requiring enzyme C2U40_19800 PF02817 e3 binding domain C2U40_19800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U40_19805 PF00456 Transketolase, thiamine diphosphate binding domain C2U40_19805 PF17831 Pyruvate dehydrogenase E1 component middle domain C2U40_19810 PF07729 FCD domain C2U40_19810 PF00392 Bacterial regulatory proteins, gntR family C2U40_19815 PF01510 N-acetylmuramoyl-L-alanine amidase C2U40_19825 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C2U40_19825 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C2U40_19835 PF07963 Prokaryotic N-terminal methylation motif C2U40_19840 PF00437 Type II/IV secretion system protein C2U40_19840 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C2U40_19845 PF00482 Type II secretion system (T2SS), protein F C2U40_19850 PF01478 Type IV leader peptidase family C2U40_19850 PF06750 Bacterial Peptidase A24 N-terminal domain C2U40_19855 PF01121 Dephospho-CoA kinase C2U40_19860 PF07072 Cell division protein C2U40_19865 PF03884 DNA gyrase inhibitor YacG C2U40_19870 PF00293 NUDIX domain C2U40_19880 PF01043 SecA preprotein cross-linking domain C2U40_19880 PF07516 SecA Wing and Scaffold domain C2U40_19880 PF02810 SEC-C motif C2U40_19880 PF07517 SecA DEAD-like domain C2U40_19890 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C2U40_19895 PF00091 Tubulin/FtsZ family, GTPase domain C2U40_19895 PF12327 FtsZ family, C-terminal domain C2U40_19900 PF02491 SHS2 domain inserted in FTSA C2U40_19905 PF03799 Cell division protein FtsQ C2U40_19905 PF08478 POTRA domain, FtsQ-type C2U40_19910 PF01225 Mur ligase family, catalytic domain C2U40_19910 PF02875 Mur ligase family, glutamate ligase domain C2U40_19910 PF08245 Mur ligase middle domain C2U40_19915 PF03033 Glycosyltransferase family 28 N-terminal domain C2U40_19915 PF04101 Glycosyltransferase family 28 C-terminal domain C2U40_19920 PF01098 Cell cycle protein C2U40_19925 PF08245 Mur ligase middle domain C2U40_19925 PF02875 Mur ligase family, glutamate ligase domain C2U40_19930 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C2U40_19930 PF00953 Glycosyl transferase family 4 C2U40_19935 PF01225 Mur ligase family, catalytic domain C2U40_19935 PF02875 Mur ligase family, glutamate ligase domain C2U40_19935 PF08245 Mur ligase middle domain C2U40_19940 PF01225 Mur ligase family, catalytic domain C2U40_19940 PF02875 Mur ligase family, glutamate ligase domain C2U40_19940 PF08245 Mur ligase middle domain C2U40_19945 PF00905 Penicillin binding protein transpeptidase domain C2U40_19945 PF03717 Penicillin-binding Protein dimerisation domain C2U40_19950 PF04999 Cell division protein FtsL C2U40_19955 PF01795 MraW methylase family C2U40_19960 PF02381 MraZ protein, putative antitoxin-like C2U40_19970 PF01476 LysM domain C2U40_19970 PF01464 Transglycosylase SLT domain C2U40_19980 PF00691 OmpA family C2U40_19980 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U40_19985 PF01618 MotA/TolQ/ExbB proton channel family C2U40_19990 PF04545 Sigma-70, region 4 C2U40_19990 PF04542 Sigma-70 region 2 C2U40_20010 PF02561 Flagellar protein FliS C2U40_20015 PF07196 Flagellin hook IN motif C2U40_20015 PF07195 Flagellar hook-associated protein 2 C-terminus C2U40_20015 PF02465 Flagellar hook-associated protein 2 N-terminus C2U40_20020 PF00669 Bacterial flagellin N-terminal helical region C2U40_20020 PF00700 Bacterial flagellin C-terminal helical region C2U40_20035 PF00669 Bacterial flagellin N-terminal helical region C2U40_20040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_20040 PF00460 Flagella basal body rod protein C2U40_20050 PF02119 Flagellar P-ring protein C2U40_20055 PF02107 Flagellar L-ring protein C2U40_20060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_20060 PF00460 Flagella basal body rod protein C2U40_20065 PF00460 Flagella basal body rod protein C2U40_20065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_20070 PF07559 Flagellar basal body protein FlaE C2U40_20070 PF00460 Flagella basal body rod protein C2U40_20070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_20075 PF03963 Flagellar hook capping protein - N-terminal region C2U40_20075 PF13860 FlgD Ig-like domain C2U40_20075 PF13861 FlgD Tudor-like domain C2U40_20080 PF00460 Flagella basal body rod protein C2U40_20080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U40_20085 PF00460 Flagella basal body rod protein C2U40_20110 PF18269 T3SS EscN ATPase C-terminal domain C2U40_20110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U40_20120 PF14842 FliG N-terminal domain C2U40_20120 PF14841 FliG middle domain C2U40_20120 PF01706 FliG C-terminal domain C2U40_20125 PF01514 Secretory protein of YscJ/FliF family C2U40_20125 PF08345 Flagellar M-ring protein C-terminal C2U40_20130 PF02049 Flagellar hook-basal body complex protein FliE C2U40_20135 PF00158 Sigma-54 interaction domain C2U40_20135 PF02954 Bacterial regulatory protein, Fis family C2U40_20135 PF00072 Response regulator receiver domain C2U40_20140 PF00771 FHIPEP family C2U40_20145 PF01312 FlhB HrpN YscU SpaS Family C2U40_20150 PF01311 Bacterial export proteins, family 1 C2U40_20155 PF01313 Bacterial export proteins, family 3 C2U40_20160 PF00813 FliP family C2U40_20165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U40_20180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U40_20185 PF04348 LppC putative lipoprotein C2U40_20190 PF02021 Uncharacterised protein family UPF0102 C2U40_20195 PF13580 SIS domain C2U40_20200 PF04972 BON domain C2U40_20205 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_20205 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_20205 PF01610 Transposase C2U40_20210 PF04386 Stringent starvation protein B C2U40_20215 PF00043 Glutathione S-transferase, C-terminal domain C2U40_20215 PF02798 Glutathione S-transferase, N-terminal domain C2U40_20220 PF02167 Cytochrome C1 family C2U40_20225 PF00032 Cytochrome b(C-terminal)/b6/petD C2U40_20225 PF00033 Cytochrome b/b6/petB C2U40_20230 PF00355 Rieske [2Fe-2S] domain C2U40_20230 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C2U40_20235 PF00380 Ribosomal protein S9/S16 C2U40_20240 PF00572 Ribosomal protein L13 C2U40_20245 PF03969 AFG1-like ATPase C2U40_20255 PF13180 PDZ domain C2U40_20255 PF00595 PDZ domain C2U40_20260 PF13180 PDZ domain C2U40_20290 PF01979 Amidohydrolase family C2U40_20295 PF03841 L-seryl-tRNA selenium transferase C2U40_20300 PF07071 KDGP aldolase C2U40_20305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U40_20305 PF08279 HTH domain C2U40_20305 PF05043 Mga helix-turn-helix domain C2U40_20305 PF00874 PRD domain C2U40_20310 PF00381 PTS HPr component phosphorylation site C2U40_20315 PF03668 P-loop ATPase protein family C2U40_20320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U40_20325 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C2U40_20330 PF04963 Sigma-54 factor, core binding domain C2U40_20330 PF00309 Sigma-54 factor, Activator interacting domain (AID) C2U40_20330 PF04552 Sigma-54, DNA binding domain C2U40_20335 PF00005 ABC transporter C2U40_20335 PF12399 Branched-chain amino acid ATP-binding cassette transporter C2U40_20340 PF03968 OstA-like protein C2U40_20345 PF06835 Lipopolysaccharide-assembly, LptC-related C2U40_20355 PF00571 CBS domain C2U40_20355 PF01380 SIS domain C2U40_20360 PF00005 ABC transporter C2U40_20365 PF02405 Permease MlaE C2U40_20370 PF02470 MlaD protein C2U40_20375 PF05494 MlaC protein C2U40_20385 PF01722 BolA-like protein C2U40_20390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2U40_20395 PF01523 Putative modulator of DNA gyrase C2U40_20400 PF04751 Protein of unknown function (DUF615) C2U40_20410 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_20410 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_20410 PF01610 Transposase C2U40_20415 PF04363 Protein of unknown function (DUF496) C2U40_20420 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_20420 PF01610 Transposase C2U40_20420 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_20450 PF01381 Helix-turn-helix C2U40_20450 PF07883 Cupin domain C2U40_20455 PF03594 Benzoate membrane transport protein C2U40_20465 PF02219 Methylenetetrahydrofolate reductase C2U40_20480 PF12729 Four helix bundle sensory module for signal transduction C2U40_20480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_20480 PF00672 HAMP domain C2U40_20485 PF03922 OmpW family C2U40_20490 PF00990 Diguanylate cyclase, GGDEF domain C2U40_20490 PF17158 Membrane-associated sensor, integral membrane domain C2U40_20495 PF00005 ABC transporter C2U40_20495 PF17760 UvrA interaction domain C2U40_20495 PF17755 UvrA DNA-binding domain C2U40_20500 PF00196 Bacterial regulatory proteins, luxR family C2U40_20505 PF00436 Single-strand binding protein family C2U40_20520 PF01545 Cation efflux family C2U40_20520 PF16916 Dimerisation domain of Zinc Transporter C2U40_20530 PF00313 'Cold-shock' DNA-binding domain C2U40_20535 PF07715 TonB-dependent Receptor Plug Domain C2U40_20535 PF00593 TonB dependent receptor C2U40_20540 PF01590 GAF domain C2U40_20540 PF00990 Diguanylate cyclase, GGDEF domain C2U40_20540 PF00360 Phytochrome region C2U40_20540 PF00563 EAL domain C2U40_20545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_20545 PF00512 His Kinase A (phospho-acceptor) domain C2U40_20545 PF00672 HAMP domain C2U40_20550 PF00072 Response regulator receiver domain C2U40_20550 PF00486 Transcriptional regulatory protein, C terminal C2U40_20570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_20570 PF00672 HAMP domain C2U40_20580 PF00990 Diguanylate cyclase, GGDEF domain C2U40_20580 PF17151 Periplasmic sensor domain C2U40_20590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U40_20600 PF13538 UvrD-like helicase C-terminal domain C2U40_20605 PF12705 PD-(D/E)XK nuclease superfamily C2U40_20605 PF13361 UvrD-like helicase C-terminal domain C2U40_20605 PF00580 UvrD/REP helicase N-terminal domain C2U40_20610 PF17946 RecC C-terminal domain C2U40_20615 PF07681 DoxX C2U40_20620 PF17954 Quercetinase C-terminal cupin domain C2U40_20620 PF02678 Pirin C2U40_20630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_20630 PF03466 LysR substrate binding domain C2U40_20645 PF00392 Bacterial regulatory proteins, gntR family C2U40_20645 PF07702 UTRA domain C2U40_20660 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_20670 PF08402 TOBE domain C2U40_20670 PF00005 ABC transporter C2U40_20680 PF00990 Diguanylate cyclase, GGDEF domain C2U40_20700 PF00583 Acetyltransferase (GNAT) family C2U40_20705 PF00199 Catalase C2U40_20705 PF06628 Catalase-related immune-responsive C2U40_20730 PF00293 NUDIX domain C2U40_20735 PF01594 AI-2E family transporter C2U40_20760 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2U40_20765 PF03466 LysR substrate binding domain C2U40_20765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_20770 PF02954 Bacterial regulatory protein, Fis family C2U40_20770 PF00158 Sigma-54 interaction domain C2U40_20770 PF00989 PAS fold C2U40_20775 PF00465 Iron-containing alcohol dehydrogenase C2U40_20780 PF05524 PEP-utilising enzyme, N-terminal C2U40_20780 PF03610 PTS system fructose IIA component C2U40_20780 PF00391 PEP-utilising enzyme, mobile domain C2U40_20780 PF00381 PTS HPr component phosphorylation site C2U40_20785 PF02734 DAK2 domain C2U40_20790 PF02733 Dak1 domain C2U40_20795 PF00860 Permease family C2U40_20840 PF03143 Elongation factor Tu C-terminal domain C2U40_20840 PF00009 Elongation factor Tu GTP binding domain C2U40_20840 PF03144 Elongation factor Tu domain 2 C2U40_20845 PF14492 Elongation Factor G, domain II C2U40_20845 PF00679 Elongation factor G C-terminus C2U40_20845 PF00009 Elongation factor Tu GTP binding domain C2U40_20845 PF03144 Elongation factor Tu domain 2 C2U40_20845 PF03764 Elongation factor G, domain IV C2U40_20850 PF00177 Ribosomal protein S7p/S5e C2U40_20855 PF00164 Ribosomal protein S12/S23 C2U40_20860 PF04077 DsrH like protein C2U40_20865 PF02635 DsrE/DsrF-like family C2U40_20870 PF02635 DsrE/DsrF-like family C2U40_20875 PF01042 Endoribonuclease L-PSP C2U40_20880 PF08348 YheO-like PAS domain C2U40_20880 PF13309 HTH domain C2U40_20885 PF00623 RNA polymerase Rpb1, domain 2 C2U40_20885 PF04983 RNA polymerase Rpb1, domain 3 C2U40_20885 PF05000 RNA polymerase Rpb1, domain 4 C2U40_20885 PF04998 RNA polymerase Rpb1, domain 5 C2U40_20885 PF04997 RNA polymerase Rpb1, domain 1 C2U40_20890 PF04563 RNA polymerase beta subunit C2U40_20890 PF00562 RNA polymerase Rpb2, domain 6 C2U40_20890 PF04561 RNA polymerase Rpb2, domain 2 C2U40_20890 PF10385 RNA polymerase beta subunit external 1 domain C2U40_20890 PF04565 RNA polymerase Rpb2, domain 3 C2U40_20890 PF04560 RNA polymerase Rpb2, domain 7 C2U40_20895 PF00542 Ribosomal protein L7/L12 C-terminal domain C2U40_20895 PF16320 Ribosomal protein L7/L12 dimerisation domain C2U40_20900 PF00466 Ribosomal protein L10 C2U40_20905 PF00687 Ribosomal protein L1p/L10e family C2U40_20910 PF00298 Ribosomal protein L11, RNA binding domain C2U40_20910 PF03946 Ribosomal protein L11, N-terminal domain C2U40_20915 PF00467 KOW motif C2U40_20915 PF02357 Transcription termination factor nusG C2U40_20920 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C2U40_20930 PF03144 Elongation factor Tu domain 2 C2U40_20930 PF00009 Elongation factor Tu GTP binding domain C2U40_20930 PF03143 Elongation factor Tu C-terminal domain C2U40_20945 PF00485 Phosphoribulokinase / Uridine kinase family C2U40_20950 PF02237 Biotin protein ligase C terminal domain C2U40_20950 PF08279 HTH domain C2U40_20950 PF03099 Biotin/lipoate A/B protein ligase family C2U40_20955 PF01565 FAD binding domain C2U40_20955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C2U40_20960 PF02080 TrkA-C domain C2U40_20960 PF02254 TrkA-N domain C2U40_20965 PF02386 Cation transport protein C2U40_20970 PF12852 Cupin C2U40_20970 PF12833 Helix-turn-helix domain C2U40_20985 PF01131 DNA topoisomerase C2U40_20985 PF01751 Toprim domain C2U40_20990 PF03264 NapC/NirT cytochrome c family, N-terminal region C2U40_20995 PF18364 Molybdopterin oxidoreductase N-terminal domain C2U40_20995 PF01568 Molydopterin dinucleotide binding domain C2U40_20995 PF00384 Molybdopterin oxidoreductase C2U40_21005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_21005 PF08918 PhoQ Sensor C2U40_21010 PF00072 Response regulator receiver domain C2U40_21010 PF00486 Transcriptional regulatory protein, C terminal C2U40_21025 PF01794 Ferric reductase like transmembrane component C2U40_21030 PF00174 Oxidoreductase molybdopterin binding domain C2U40_21040 PF06496 Protein of unknown function (DUF1097) C2U40_21045 PF00158 Sigma-54 interaction domain C2U40_21045 PF00072 Response regulator receiver domain C2U40_21055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_21055 PF00512 His Kinase A (phospho-acceptor) domain C2U40_21075 PF00571 CBS domain C2U40_21075 PF00478 IMP dehydrogenase / GMP reductase domain C2U40_21080 PF10063 Uncharacterized integral membrane protein (DUF2301) C2U40_21090 PF01037 Lrp/AsnC ligand binding domain C2U40_21095 PF03590 Aspartate-ammonia ligase C2U40_21110 PF17871 AAA lid domain C2U40_21110 PF10431 C-terminal, D2-small domain, of ClpB protein C2U40_21110 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_21110 PF02861 Clp amino terminal domain, pathogenicity island component C2U40_21110 PF07724 AAA domain (Cdc48 subfamily) C2U40_21120 PF01479 S4 domain C2U40_21120 PF00849 RNA pseudouridylate synthase C2U40_21125 PF13525 Outer membrane lipoprotein C2U40_21130 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_21130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U40_21135 PF00375 Sodium:dicarboxylate symporter family C2U40_21140 PF03313 Serine dehydratase alpha chain C2U40_21150 PF02233 NAD(P) transhydrogenase beta subunit C2U40_21155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2U40_21155 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C2U40_21155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2U40_21160 PF00465 Iron-containing alcohol dehydrogenase C2U40_21175 PF13693 Winged helix-turn-helix DNA-binding C2U40_21185 PF13401 AAA domain C2U40_21185 PF09077 Mu B transposition protein, C terminal C2U40_21415 PF08212 Lipocalin-like domain C2U40_21420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_21420 PF02743 Cache domain C2U40_21420 PF00672 HAMP domain C2U40_21425 PF02666 Phosphatidylserine decarboxylase C2U40_21440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U40_21440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U40_21445 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C2U40_21445 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C2U40_21450 PF02863 Arginine repressor, C-terminal domain C2U40_21450 PF01316 Arginine repressor, DNA binding domain C2U40_21455 PF03606 C4-dicarboxylate anaerobic carrier C2U40_21460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U40_21460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U40_21465 PF00696 Amino acid kinase family C2U40_21485 PF02743 Cache domain C2U40_21485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_21485 PF00672 HAMP domain C2U40_21490 PF02653 Branched-chain amino acid transport system / permease component C2U40_21495 PF00005 ABC transporter C2U40_21500 PF13407 Periplasmic binding protein domain C2U40_21505 PF00703 Glycosyl hydrolases family 2 C2U40_21505 PF16353 Domain of unknown function(DUF4981) C2U40_21505 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2U40_21505 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2U40_21505 PF02929 Beta galactosidase small chain C2U40_21510 PF00356 Bacterial regulatory proteins, lacI family C2U40_21515 PF16363 GDP-mannose 4,6 dehydratase C2U40_21520 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C2U40_21520 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C2U40_21525 PF10509 Galactokinase galactose-binding signature C2U40_21525 PF08544 GHMP kinases C terminal C2U40_21525 PF00288 GHMP kinases N terminal domain C2U40_21530 PF01263 Aldose 1-epimerase C2U40_21535 PF00248 Aldo/keto reductase family C2U40_21540 PF02673 Bacitracin resistance protein BacA C2U40_21545 PF12973 ChrR Cupin-like domain C2U40_21550 PF04542 Sigma-70 region 2 C2U40_21550 PF04545 Sigma-70, region 4 C2U40_21560 PF05746 DALR anticodon binding domain C2U40_21560 PF00750 tRNA synthetases class I (R) C2U40_21560 PF03485 Arginyl tRNA synthetase N terminal domain C2U40_21570 PF00227 Proteasome subunit C2U40_21575 PF00004 ATPase family associated with various cellular activities (AAA) C2U40_21575 PF10431 C-terminal, D2-small domain, of ClpB protein C2U40_21575 PF07724 AAA domain (Cdc48 subfamily) C2U40_21580 PF07690 Major Facilitator Superfamily C2U40_21595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_21600 PF00005 ABC transporter C2U40_21615 PF04324 BFD-like [2Fe-2S] binding domain C2U40_21615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U40_21615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U40_21615 PF18267 Rubredoxin NAD+ reductase C-terminal domain C2U40_21615 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_21620 PF13806 Rieske-like [2Fe-2S] domain C2U40_21625 PF01226 Formate/nitrite transporter C2U40_21630 PF10414 Sirohaem synthase dimerisation region C2U40_21630 PF14824 Sirohaem biosynthesis protein central C2U40_21630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U40_21635 PF01769 Divalent cation transporter C2U40_21635 PF03448 MgtE intracellular N domain C2U40_21635 PF00571 CBS domain C2U40_21640 PF03737 Aldolase/RraA C2U40_21645 PF02592 Putative vitamin uptake transporter C2U40_21655 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C2U40_21660 PF00034 Cytochrome c C2U40_21665 PF00270 DEAD/DEAH box helicase C2U40_21665 PF16124 RecQ zinc-binding C2U40_21665 PF09382 RQC domain C2U40_21665 PF00271 Helicase conserved C-terminal domain C2U40_21665 PF00570 HRDC domain C2U40_21670 PF03061 Thioesterase superfamily C2U40_21685 PF03473 MOSC domain C2U40_21685 PF03475 3-alpha domain C2U40_21690 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_21695 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_21700 PF00005 ABC transporter C2U40_21700 PF08402 TOBE domain C2U40_21705 PF13416 Bacterial extracellular solute-binding protein C2U40_21710 PF13416 Bacterial extracellular solute-binding protein C2U40_21715 PF00202 Aminotransferase class-III C2U40_21720 PF00120 Glutamine synthetase, catalytic domain C2U40_21725 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2U40_21740 PF05981 CreA protein C2U40_21745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U40_21745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U40_21750 PF00012 Hsp70 protein C2U40_21765 PF00128 Alpha amylase, catalytic domain C2U40_21765 PF02903 Alpha amylase, N-terminal ig-like domain C2U40_21770 PF02719 Polysaccharide biosynthesis protein C2U40_21775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2U40_21780 PF12804 MobA-like NTP transferase domain C2U40_21785 PF02540 NAD synthase C2U40_21785 PF00117 Glutamine amidotransferase class-I C2U40_21785 PF00958 GMP synthase C terminal domain C2U40_21790 PF00391 PEP-utilising enzyme, mobile domain C2U40_21790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C2U40_21815 PF13439 Glycosyltransferase Family 4 C2U40_21815 PF00534 Glycosyl transferases group 1 C2U40_21820 PF03275 UDP-galactopyranose mutase C2U40_21825 PF00535 Glycosyl transferase family 2 C2U40_21840 PF13193 AMP-binding enzyme C-terminal domain C2U40_21840 PF00501 AMP-binding enzyme C2U40_21860 PF02348 Cytidylyltransferase C2U40_21870 PF03102 NeuB family C2U40_21870 PF08666 SAF domain C2U40_21890 PF09940 Domain of unknown function (DUF2172) C2U40_21890 PF16254 Domain of unknown function (DUF4910) C2U40_21890 PF16221 winged helix-turn-helix C2U40_21925 PF05958 tRNA (Uracil-5-)-methyltransferase C2U40_21930 PF00072 Response regulator receiver domain C2U40_21930 PF00486 Transcriptional regulatory protein, C terminal C2U40_21935 PF00672 HAMP domain C2U40_21935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_21935 PF00512 His Kinase A (phospho-acceptor) domain C2U40_21945 PF03949 Malic enzyme, NAD binding domain C2U40_21945 PF00390 Malic enzyme, N-terminal domain C2U40_21950 PF11066 Protein of unknown function (DUF2867) C2U40_21950 PF13460 NAD(P)H-binding C2U40_21955 PF01197 Ribosomal protein L31 C2U40_21960 PF17764 3′ DNA-binding domain (3′BD) C2U40_21960 PF00270 DEAD/DEAH box helicase C2U40_21960 PF00271 Helicase conserved C-terminal domain C2U40_21960 PF18074 Primosomal protein N C-terminal domain C2U40_21960 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C2U40_21970 PF00691 OmpA family C2U40_21970 PF01389 OmpA-like transmembrane domain C2U40_21975 PF00585 C-terminal regulatory domain of Threonine dehydratase C2U40_21975 PF00291 Pyridoxal-phosphate dependent enzyme C2U40_21980 PF00920 Dehydratase family C2U40_21985 PF01063 Amino-transferase class IV C2U40_21995 PF00205 Thiamine pyrophosphate enzyme, central domain C2U40_21995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U40_21995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U40_22005 PF13335 Magnesium chelatase, subunit ChlI C-terminal C2U40_22005 PF01078 Magnesium chelatase, subunit ChlI C2U40_22010 PF01553 Acyltransferase C2U40_22015 PF01553 Acyltransferase C2U40_22020 PF04463 Protein of unknown function (DUF523) C2U40_22030 PF00857 Isochorismatase family C2U40_22035 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C2U40_22035 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C2U40_22040 PF01323 DSBA-like thioredoxin domain C2U40_22045 PF01636 Phosphotransferase enzyme family C2U40_22050 PF12801 4Fe-4S binding domain C2U40_22050 PF13746 4Fe-4S dicluster domain C2U40_22050 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C2U40_22055 PF06288 Protein of unknown function (DUF1040) C2U40_22060 PF00360 Phytochrome region C2U40_22060 PF00990 Diguanylate cyclase, GGDEF domain C2U40_22060 PF00563 EAL domain C2U40_22060 PF01590 GAF domain C2U40_22065 PF09278 MerR, DNA binding C2U40_22065 PF00376 MerR family regulatory protein C2U40_22070 PF00403 Heavy-metal-associated domain C2U40_22075 PF00156 Phosphoribosyl transferase domain C2U40_22080 PF03725 3' exoribonuclease family, domain 2 C2U40_22080 PF01138 3' exoribonuclease family, domain 1 C2U40_22085 PF08340 Domain of unknown function (DUF1732) C2U40_22085 PF03755 YicC-like family, N-terminal region C2U40_22105 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C2U40_22120 PF01370 NAD dependent epimerase/dehydratase family C2U40_22125 PF00440 Bacterial regulatory proteins, tetR family C2U40_22125 PF08360 QacR-like protein, C-terminal region C2U40_22130 PF00155 Aminotransferase class I and II C2U40_22135 PF08240 Alcohol dehydrogenase GroES-like domain C2U40_22135 PF00107 Zinc-binding dehydrogenase C2U40_22140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2U40_22145 PF00563 EAL domain C2U40_22145 PF03707 Bacterial signalling protein N terminal repeat C2U40_22145 PF00990 Diguanylate cyclase, GGDEF domain C2U40_22150 PF00580 UvrD/REP helicase N-terminal domain C2U40_22150 PF13361 UvrD-like helicase C-terminal domain C2U40_22155 PF00266 Aminotransferase class-V C2U40_22160 PF02657 Fe-S metabolism associated domain C2U40_22165 PF00899 ThiF family C2U40_22195 PF12724 Flavodoxin domain C2U40_22200 PF02386 Cation transport protein C2U40_22205 PF01205 Uncharacterized protein family UPF0029 C2U40_22205 PF09186 Domain of unknown function (DUF1949) C2U40_22210 PF00557 Metallopeptidase family M24 C2U40_22215 PF13193 AMP-binding enzyme C-terminal domain C2U40_22215 PF00501 AMP-binding enzyme C2U40_22220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C2U40_22220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C2U40_22220 PF00378 Enoyl-CoA hydratase/isomerase C2U40_22225 PF02803 Thiolase, C-terminal domain C2U40_22225 PF00108 Thiolase, N-terminal domain C2U40_22230 PF00072 Response regulator receiver domain C2U40_22230 PF00486 Transcriptional regulatory protein, C terminal C2U40_22235 PF00672 HAMP domain C2U40_22235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_22235 PF00512 His Kinase A (phospho-acceptor) domain C2U40_22240 PF01547 Bacterial extracellular solute-binding protein C2U40_22250 PF01206 Sulfurtransferase TusA C2U40_22255 PF01042 Endoribonuclease L-PSP C2U40_22260 PF13488 Glycine zipper C2U40_22260 PF00691 OmpA family C2U40_22265 PF00672 HAMP domain C2U40_22265 PF02743 Cache domain C2U40_22265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_22270 PF03352 Methyladenine glycosylase C2U40_22275 PF02091 Glycyl-tRNA synthetase alpha subunit C2U40_22280 PF02092 Glycyl-tRNA synthetase beta subunit C2U40_22280 PF05746 DALR anticodon binding domain C2U40_22315 PF03496 ADP-ribosyltransferase exoenzyme C2U40_22315 PF03545 Yersinia virulence determinant (YopE) C2U40_22320 PF05932 Tir chaperone protein (CesT) family C2U40_22325 PF01609 Transposase DDE domain C2U40_22325 PF13006 Insertion element 4 transposase N-terminal C2U40_22335 PF03222 Tryptophan/tyrosine permease family C2U40_22340 PF12801 4Fe-4S binding domain C2U40_22350 PF18113 Rubredoxin binding C-terminal domain C2U40_22350 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_22355 PF00753 Metallo-beta-lactamase superfamily C2U40_22355 PF00301 Rubredoxin C2U40_22355 PF00258 Flavodoxin C2U40_22360 PF01590 GAF domain C2U40_22360 PF00158 Sigma-54 interaction domain C2U40_22365 PF07702 UTRA domain C2U40_22365 PF00392 Bacterial regulatory proteins, gntR family C2U40_22370 PF02378 Phosphotransferase system, EIIC C2U40_22370 PF00367 phosphotransferase system, EIIB C2U40_22375 PF11975 Family 4 glycosyl hydrolase C-terminal domain C2U40_22375 PF02056 Family 4 glycosyl hydrolase C2U40_22380 PF00356 Bacterial regulatory proteins, lacI family C2U40_22385 PF13458 Periplasmic binding protein C2U40_22390 PF02653 Branched-chain amino acid transport system / permease component C2U40_22395 PF02653 Branched-chain amino acid transport system / permease component C2U40_22395 PF11862 Domain of unknown function (DUF3382) C2U40_22400 PF12399 Branched-chain amino acid ATP-binding cassette transporter C2U40_22400 PF00005 ABC transporter C2U40_22405 PF00005 ABC transporter C2U40_22420 PF00581 Rhodanese-like domain C2U40_22425 PF01694 Rhomboid family C2U40_22425 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C2U40_22430 PF12262 Bacterial virulence factor lipase N-terminal C2U40_22435 PF04380 Membrane fusogenic activity C2U40_22440 PF00175 Oxidoreductase NAD-binding domain C2U40_22445 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C2U40_22455 PF07497 Rho termination factor, RNA-binding domain C2U40_22455 PF07498 Rho termination factor, N-terminal domain C2U40_22455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U40_22460 PF00085 Thioredoxin C2U40_22465 PF00270 DEAD/DEAH box helicase C2U40_22465 PF00271 Helicase conserved C-terminal domain C2U40_22470 PF02541 Ppx/GppA phosphatase family C2U40_22485 PF04445 Putative SAM-dependent methyltransferase C2U40_22490 PF00563 EAL domain C2U40_22490 PF00990 Diguanylate cyclase, GGDEF domain C2U40_22490 PF03707 Bacterial signalling protein N terminal repeat C2U40_22495 PF01432 Peptidase family M3 C2U40_22500 PF00490 Delta-aminolevulinic acid dehydratase C2U40_22505 PF01026 TatD related DNase C2U40_22510 PF00902 Sec-independent protein translocase protein (TatC) C2U40_22515 PF02416 mttA/Hcf106 family C2U40_22520 PF02416 mttA/Hcf106 family C2U40_22525 PF03109 ABC1 family C2U40_22530 PF02036 SCP-2 sterol transfer family C2U40_22535 PF01209 ubiE/COQ5 methyltransferase family C2U40_22540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C2U40_22545 PF07969 Amidohydrolase family C2U40_22585 PF03544 Gram-negative bacterial TonB protein C-terminal C2U40_22590 PF02472 Biopolymer transport protein ExbD/TolR C2U40_22595 PF01618 MotA/TolQ/ExbB proton channel family C2U40_22600 PF01618 MotA/TolQ/ExbB proton channel family C2U40_22610 PF00196 Bacterial regulatory proteins, luxR family C2U40_22610 PF03472 Autoinducer binding domain C2U40_22615 PF18766 SWI2/SNF2 ATPase C2U40_22615 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U40_22615 PF11867 Domain of unknown function (DUF3387) C2U40_22635 PF01420 Type I restriction modification DNA specificity domain C2U40_22640 PF02384 N-6 DNA Methylase C2U40_22650 PF18623 TnsE C-terminal domain C2U40_22655 PF15978 Tn7-like transposition protein D C2U40_22655 PF06527 TniQ C2U40_22660 PF11426 Tn7 transposition regulator TnsC C2U40_22660 PF13401 AAA domain C2U40_22665 PF00665 Integrase core domain C2U40_22670 PF08722 TnsA endonuclease N terminal C2U40_22670 PF08721 TnsA endonuclease C terminal C2U40_22675 PF01380 SIS domain C2U40_22680 PF08220 DeoR-like helix-turn-helix domain C2U40_22680 PF00455 DeoR C terminal sensor domain C2U40_22685 PF00072 Response regulator receiver domain C2U40_22685 PF00486 Transcriptional regulatory protein, C terminal C2U40_22690 PF00512 His Kinase A (phospho-acceptor) domain C2U40_22690 PF00672 HAMP domain C2U40_22690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_22695 PF00905 Penicillin binding protein transpeptidase domain C2U40_22700 PF06123 Inner membrane protein CreD C2U40_22705 PF12804 MobA-like NTP transferase domain C2U40_22705 PF14602 Hexapeptide repeat of succinyl-transferase C2U40_22705 PF00132 Bacterial transferase hexapeptide (six repeats) C2U40_22710 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C2U40_22710 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C2U40_22715 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2U40_22715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U40_22720 PF00231 ATP synthase C2U40_22725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U40_22725 PF00306 ATP synthase alpha/beta chain, C terminal domain C2U40_22725 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2U40_22730 PF00213 ATP synthase delta (OSCP) subunit C2U40_22735 PF00430 ATP synthase B/B' CF(0) C2U40_22740 PF00137 ATP synthase subunit C C2U40_22745 PF00119 ATP synthase A chain C2U40_22755 PF17762 HTH domain found in ParB protein C2U40_22755 PF02195 ParB-like nuclease domain C2U40_22760 PF13614 AAA domain C2U40_22765 PF02527 rRNA small subunit methyltransferase G C2U40_22770 PF13932 GidA associated domain C2U40_22770 PF01134 Glucose inhibited division protein A C2U40_22775 PF00258 Flavodoxin C2U40_22780 PF07715 TonB-dependent Receptor Plug Domain C2U40_22780 PF00593 TonB dependent receptor C2U40_22785 PF00005 ABC transporter C2U40_22790 PF00005 ABC transporter C2U40_22800 PF01032 FecCD transport family C2U40_22810 PF07804 HipA-like C-terminal domain C2U40_22810 PF13657 HipA N-terminal domain C2U40_22835 PF00665 Integrase core domain C2U40_22840 PF01695 IstB-like ATP binding protein C2U40_22845 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_22845 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_22845 PF01610 Transposase C2U40_22870 PF13091 PLD-like domain C2U40_22870 PF13087 AAA domain C2U40_22905 PF00589 Phage integrase family C2U40_22905 PF02899 Phage integrase, N-terminal SAM-like domain C2U40_22910 PF01926 50S ribosome-binding GTPase C2U40_22910 PF10396 GTP-binding protein TrmE N-terminus C2U40_22910 PF12631 MnmE helical domain C2U40_22915 PF02096 60Kd inner membrane protein C2U40_22915 PF14849 YidC periplasmic domain C2U40_22920 PF01809 Putative membrane protein insertion efficiency factor C2U40_22925 PF00825 Ribonuclease P C2U40_22930 PF00468 Ribosomal protein L34 C2U40_22940 PF00528 Binding-protein-dependent transport system inner membrane component C2U40_22945 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_22950 PF08299 Bacterial dnaA protein helix-turn-helix C2U40_22950 PF00308 Bacterial dnaA protein C2U40_22950 PF11638 DnaA N-terminal domain C2U40_22955 PF00712 DNA polymerase III beta subunit, N-terminal domain C2U40_22955 PF02768 DNA polymerase III beta subunit, C-terminal domain C2U40_22955 PF02767 DNA polymerase III beta subunit, central domain C2U40_22960 PF02463 RecF/RecN/SMC N terminal domain C2U40_22965 PF01751 Toprim domain C2U40_22965 PF00204 DNA gyrase B C2U40_22965 PF18053 DNA gyrase B subunit insert domain C2U40_22965 PF00986 DNA gyrase B subunit, carboxyl terminus C2U40_22965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_22980 PF00011 Hsp20/alpha crystallin family C2U40_22985 PF00011 Hsp20/alpha crystallin family C2U40_22990 PF00155 Aminotransferase class I and II C2U40_23005 PF07690 Major Facilitator Superfamily C2U40_23010 PF00486 Transcriptional regulatory protein, C terminal C2U40_23010 PF00072 Response regulator receiver domain C2U40_23015 PF13492 GAF domain C2U40_23015 PF02702 Osmosensitive K+ channel His kinase sensor domain C2U40_23015 PF13493 Domain of unknown function (DUF4118) C2U40_23015 PF00512 His Kinase A (phospho-acceptor) domain C2U40_23015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_23020 PF02669 K+-transporting ATPase, c chain C2U40_23030 PF03814 Potassium-transporting ATPase A subunit C2U40_23040 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U40_23040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U40_23045 PF00512 His Kinase A (phospho-acceptor) domain C2U40_23045 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_23045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_23050 PF00873 AcrB/AcrD/AcrF family C2U40_23055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U40_23095 PF12146 Serine aminopeptidase, S33 C2U40_23100 PF12105 SpoU, rRNA methylase, C-terminal C2U40_23100 PF00588 SpoU rRNA Methylase family C2U40_23105 PF04607 Region found in RelA / SpoT proteins C2U40_23105 PF02824 TGS domain C2U40_23105 PF13291 ACT domain C2U40_23110 PF01192 RNA polymerase Rpb6 C2U40_23115 PF00625 Guanylate kinase C2U40_23120 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U40_23135 PF00892 EamA-like transporter family C2U40_23155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_23155 PF03466 LysR substrate binding domain C2U40_23160 PF00579 tRNA synthetases class I (W and Y) C2U40_23165 PF00582 Universal stress protein family C2U40_23170 PF07055 Enoyl reductase FAD binding domain C2U40_23170 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C2U40_23170 PF12241 Trans-2-enoyl-CoA reductase catalytic region C2U40_23175 PF00990 Diguanylate cyclase, GGDEF domain C2U40_23180 PF00210 Ferritin-like domain C2U40_23190 PF07690 Major Facilitator Superfamily C2U40_23195 PF01810 LysE type translocator C2U40_23210 PF16967 E-set like domain C2U40_23210 PF15976 CS1-pili formation C-terminal C2U40_23215 PF18649 EcpB C-terminal domain C2U40_23220 PF16449 Fimbrillin MatB C2U40_23225 PF00196 Bacterial regulatory proteins, luxR family C2U40_23225 PF00072 Response regulator receiver domain C2U40_23230 PF00512 His Kinase A (phospho-acceptor) domain C2U40_23230 PF00072 Response regulator receiver domain C2U40_23230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_23230 PF00989 PAS fold C2U40_23230 PF01627 Hpt domain C2U40_23230 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U40_23240 PF07694 5TMR of 5TMR-LYT C2U40_23240 PF06580 Histidine kinase C2U40_23240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_23245 PF00072 Response regulator receiver domain C2U40_23245 PF04397 LytTr DNA-binding domain C2U40_23250 PF07690 Major Facilitator Superfamily C2U40_23255 PF02222 ATP-grasp domain C2U40_23255 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C2U40_23260 PF00731 AIR carboxylase C2U40_23275 PF03466 LysR substrate binding domain C2U40_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_23280 PF07715 TonB-dependent Receptor Plug Domain C2U40_23280 PF00593 TonB dependent receptor C2U40_23285 PF01177 Asp/Glu/Hydantoin racemase C2U40_23315 PF00583 Acetyltransferase (GNAT) family C2U40_23315 PF13380 CoA binding domain C2U40_23315 PF13607 Succinyl-CoA ligase like flavodoxin domain C2U40_23330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_23330 PF03466 LysR substrate binding domain C2U40_23335 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C2U40_23335 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C2U40_23340 PF00342 Phosphoglucose isomerase C2U40_23355 PF00924 Mechanosensitive ion channel C2U40_23355 PF05552 Conserved TM helix C2U40_23360 PF00440 Bacterial regulatory proteins, tetR family C2U40_23365 PF00692 dUTPase C2U40_23370 PF04127 DNA / pantothenate metabolism flavoprotein C2U40_23370 PF02441 Flavoprotein C2U40_23375 PF04002 RadC-like JAB domain C2U40_23380 PF00830 Ribosomal L28 family C2U40_23385 PF00471 Ribosomal protein L33 C2U40_23395 PF06827 Zinc finger found in FPG and IleRS C2U40_23395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C2U40_23395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C2U40_23400 PF04393 Protein of unknown function (DUF535) C2U40_23405 PF01467 Cytidylyltransferase-like C2U40_23410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U40_23415 PF00535 Glycosyl transferase family 2 C2U40_23420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U40_23425 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C2U40_23430 PF03611 PTS system sugar-specific permease component C2U40_23440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U40_23445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U40_23445 PF00356 Bacterial regulatory proteins, lacI family C2U40_23450 PF08240 Alcohol dehydrogenase GroES-like domain C2U40_23450 PF00107 Zinc-binding dehydrogenase C2U40_23470 PF03748 Flagellar basal body-associated protein FliL C2U40_23475 PF04345 Chorismate lyase C2U40_23480 PF01040 UbiA prenyltransferase family C2U40_23485 PF01553 Acyltransferase C2U40_23490 PF01726 LexA DNA binding domain C2U40_23490 PF00717 Peptidase S24-like C2U40_23510 PF02630 SCO1/SenC C2U40_23515 PF01554 MatE C2U40_23520 PF00588 SpoU rRNA Methylase family C2U40_23525 PF00512 His Kinase A (phospho-acceptor) domain C2U40_23525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_23525 PF16527 Two-component sensor protein CpxA, periplasmic domain C2U40_23525 PF00672 HAMP domain C2U40_23530 PF00486 Transcriptional regulatory protein, C terminal C2U40_23530 PF00072 Response regulator receiver domain C2U40_23535 PF01545 Cation efflux family C2U40_23535 PF16916 Dimerisation domain of Zinc Transporter C2U40_23540 PF06426 Serine acetyltransferase, N-terminal C2U40_23540 PF00132 Bacterial transferase hexapeptide (six repeats) C2U40_23550 PF06005 Cell division protein ZapB C2U40_23565 PF01367 5'-3' exonuclease, C-terminal SAM fold C2U40_23565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2U40_23565 PF00476 DNA polymerase family A C2U40_23565 PF01612 3'-5' exonuclease C2U40_23570 PF00132 Bacterial transferase hexapeptide (six repeats) C2U40_23610 PF00356 Bacterial regulatory proteins, lacI family C2U40_23615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2U40_23615 PF00703 Glycosyl hydrolases family 2 C2U40_23615 PF16353 Domain of unknown function(DUF4981) C2U40_23615 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2U40_23615 PF02929 Beta galactosidase small chain C2U40_23620 PF04074 YhcH/YjgK/YiaL C2U40_23625 PF13520 Amino acid permease C2U40_23630 PF01588 Putative tRNA binding domain C2U40_23635 PF13520 Amino acid permease C2U40_23640 PF13593 SBF-like CPA transporter family (DUF4137) C2U40_23645 PF03781 Sulfatase-modifying factor enzyme 1 C2U40_23645 PF12867 DinB superfamily C2U40_23655 PF00756 Putative esterase C2U40_23660 PF08240 Alcohol dehydrogenase GroES-like domain C2U40_23660 PF00107 Zinc-binding dehydrogenase C2U40_23665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_23665 PF03466 LysR substrate binding domain C2U40_23690 PF13361 UvrD-like helicase C-terminal domain C2U40_23690 PF00580 UvrD/REP helicase N-terminal domain C2U40_23705 PF03466 LysR substrate binding domain C2U40_23705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_23725 PF14001 YdfZ protein C2U40_23750 PF06206 CpeT/CpcT family (DUF1001) C2U40_23760 PF01810 LysE type translocator C2U40_23770 PF04143 Sulphur transport C2U40_23775 PF17200 Single Cache domain 2 C2U40_23775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_23775 PF00672 HAMP domain C2U40_23780 PF00690 Cation transporter/ATPase, N-terminus C2U40_23780 PF00689 Cation transporting ATPase, C-terminus C2U40_23785 PF01810 LysE type translocator C2U40_23790 PF12833 Helix-turn-helix domain C2U40_23795 PF00892 EamA-like transporter family C2U40_23805 PF00171 Aldehyde dehydrogenase family C2U40_23810 PF07883 Cupin domain C2U40_23810 PF01381 Helix-turn-helix C2U40_23815 PF00202 Aminotransferase class-III C2U40_23820 PF00171 Aldehyde dehydrogenase family C2U40_23825 PF00958 GMP synthase C terminal domain C2U40_23825 PF02540 NAD synthase C2U40_23825 PF00117 Glutamine amidotransferase class-I C2U40_23830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2U40_23830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2U40_23835 PF00294 pfkB family carbohydrate kinase C2U40_23840 PF02082 Transcriptional regulator C2U40_23855 PF02646 RmuC family C2U40_23860 PF02386 Cation transport protein C2U40_23865 PF02080 TrkA-C domain C2U40_23865 PF02254 TrkA-N domain C2U40_23870 PF01189 16S rRNA methyltransferase RsmB/F C2U40_23870 PF01029 NusB family C2U40_23875 PF00551 Formyl transferase C2U40_23875 PF02911 Formyl transferase, C-terminal domain C2U40_23880 PF01327 Polypeptide deformylase C2U40_23890 PF17782 DprA winged helix domain C2U40_23890 PF02481 DNA recombination-mediator protein A C2U40_23895 PF04361 Protein of unknown function (DUF494) C2U40_23900 PF01396 Topoisomerase DNA binding C4 zinc finger C2U40_23905 PF00731 AIR carboxylase C2U40_23910 PF01300 Telomere recombination C2U40_23915 PF01218 Coproporphyrinogen III oxidase C2U40_23920 PF08501 Shikimate dehydrogenase substrate binding domain C2U40_23920 PF01488 Shikimate / quinate 5-dehydrogenase C2U40_23920 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C2U40_23925 PF07369 Protein of unknown function (DUF1488) C2U40_23930 PF01926 50S ribosome-binding GTPase C2U40_23935 PF00034 Cytochrome c C2U40_23945 PF04220 Der GTPase activator (YihI) C2U40_23950 PF10675 Protein of unknown function (DUF2489) C2U40_23955 PF06969 HemN C-terminal domain C2U40_23955 PF04055 Radical SAM superfamily C2U40_23960 PF00962 Adenosine/AMP deaminase C2U40_23965 PF02954 Bacterial regulatory protein, Fis family C2U40_23965 PF00158 Sigma-54 interaction domain C2U40_23965 PF00072 Response regulator receiver domain C2U40_23970 PF00512 His Kinase A (phospho-acceptor) domain C2U40_23970 PF00989 PAS fold C2U40_23970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_23980 PF00120 Glutamine synthetase, catalytic domain C2U40_23980 PF03951 Glutamine synthetase, beta-Grasp domain C2U40_23990 PF01610 Transposase C2U40_23990 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_23990 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_23995 PF03631 Virulence factor BrkB C2U40_24000 PF02580 D-Tyr-tRNA(Tyr) deacylase C2U40_24010 PF00583 Acetyltransferase (GNAT) family C2U40_24010 PF09500 Putative thioesterase (yiiD_Cterm) C2U40_24020 PF17191 RecG wedge domain C2U40_24020 PF00271 Helicase conserved C-terminal domain C2U40_24020 PF00270 DEAD/DEAH box helicase C2U40_24025 PF13091 PLD-like domain C2U40_24030 PF02447 GntP family permease C2U40_24035 PF01202 Shikimate kinase C2U40_24040 PF00920 Dehydratase family C2U40_24045 PF01081 KDPG and KHG aldolase C2U40_24050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U40_24050 PF00356 Bacterial regulatory proteins, lacI family C2U40_24060 PF01551 Peptidase family M23 C2U40_24065 PF01676 Metalloenzyme superfamily C2U40_24065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C2U40_24070 PF00581 Rhodanese-like domain C2U40_24075 PF02556 Preprotein translocase subunit SecB C2U40_24080 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C2U40_24080 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C2U40_24085 PF01106 NifU-like domain C2U40_24085 PF01521 Iron-sulphur cluster biosynthesis C2U40_24090 PF00156 Phosphoribosyl transferase domain C2U40_24095 PF00561 alpha/beta hydrolase fold C2U40_24115 PF16921 Tex protein YqgF-like domain C2U40_24115 PF09371 Tex-like protein N-terminal domain C2U40_24115 PF00575 S1 RNA binding domain C2U40_24115 PF17674 HHH domain C2U40_24120 PF01272 Transcription elongation factor, GreA/GreB, C-term C2U40_24120 PF03449 Transcription elongation factor, N-terminal C2U40_24125 PF00072 Response regulator receiver domain C2U40_24125 PF00486 Transcriptional regulatory protein, C terminal C2U40_24130 PF00512 His Kinase A (phospho-acceptor) domain C2U40_24130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U40_24130 PF00672 HAMP domain C2U40_24140 PF00338 Ribosomal protein S10p/S20e C2U40_24145 PF00297 Ribosomal protein L3 C2U40_24150 PF00573 Ribosomal protein L4/L1 family C2U40_24155 PF00276 Ribosomal protein L23 C2U40_24160 PF00181 Ribosomal Proteins L2, RNA binding domain C2U40_24160 PF03947 Ribosomal Proteins L2, C-terminal domain C2U40_24165 PF00203 Ribosomal protein S19 C2U40_24170 PF00237 Ribosomal protein L22p/L17e C2U40_24175 PF07650 KH domain C2U40_24175 PF00189 Ribosomal protein S3, C-terminal domain C2U40_24180 PF00252 Ribosomal protein L16p/L10e C2U40_24185 PF00831 Ribosomal L29 protein C2U40_24190 PF00366 Ribosomal protein S17 C2U40_24195 PF00238 Ribosomal protein L14p/L23e C2U40_24200 PF00467 KOW motif C2U40_24200 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C2U40_24205 PF00281 Ribosomal protein L5 C2U40_24205 PF00673 ribosomal L5P family C-terminus C2U40_24210 PF00253 Ribosomal protein S14p/S29e C2U40_24215 PF00410 Ribosomal protein S8 C2U40_24220 PF00347 Ribosomal protein L6 C2U40_24225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C2U40_24230 PF03719 Ribosomal protein S5, C-terminal domain C2U40_24230 PF00333 Ribosomal protein S5, N-terminal domain C2U40_24235 PF00327 Ribosomal protein L30p/L7e C2U40_24240 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C2U40_24245 PF00344 SecY translocase C2U40_24250 PF00444 Ribosomal protein L36 C2U40_24255 PF00416 Ribosomal protein S13/S18 C2U40_24260 PF00411 Ribosomal protein S11 C2U40_24265 PF00163 Ribosomal protein S4/S9 N-terminal domain C2U40_24265 PF01479 S4 domain C2U40_24270 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C2U40_24270 PF01000 RNA polymerase Rpb3/RpoA insert domain C2U40_24270 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C2U40_24275 PF01196 Ribosomal protein L17 C2U40_24330 PF02254 TrkA-N domain C2U40_24330 PF00999 Sodium/hydrogen exchanger family C2U40_24335 PF02525 Flavodoxin-like fold C2U40_24340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_24340 PF03466 LysR substrate binding domain C2U40_24345 PF00106 short chain dehydrogenase C2U40_24360 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2U40_24360 PF00326 Prolyl oligopeptidase family C2U40_24385 PF07947 YhhN family C2U40_24390 PF07690 Major Facilitator Superfamily C2U40_24395 PF13533 Biotin-lipoyl like C2U40_24400 PF03466 LysR substrate binding domain C2U40_24400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_24410 PF00375 Sodium:dicarboxylate symporter family C2U40_24415 PF10678 Protein of unknown function (DUF2492) C2U40_24420 PF01914 MarC family integral membrane protein C2U40_24425 PF03466 LysR substrate binding domain C2U40_24425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U40_24430 PF02416 mttA/Hcf106 family C2U40_24440 PF01464 Transglycosylase SLT domain C2U40_24445 PF13091 PLD-like domain C2U40_24450 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_24450 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_24450 PF01610 Transposase C2U40_24460 PF00440 Bacterial regulatory proteins, tetR family C2U40_24465 PF07226 Protein of unknown function (DUF1422) C2U40_24480 PF00448 SRP54-type protein, GTPase domain C2U40_24480 PF02881 SRP54-type protein, helical bundle domain C2U40_24485 PF00005 ABC transporter C2U40_24490 PF18075 FtsX extracellular domain C2U40_24495 PF04545 Sigma-70, region 4 C2U40_24495 PF04542 Sigma-70 region 2 C2U40_24495 PF00140 Sigma-70 factor, region 1.2 C2U40_24500 PF00484 Carbonic anhydrase C2U40_24505 PF00392 Bacterial regulatory proteins, gntR family C2U40_24505 PF07702 UTRA domain C2U40_24510 PF01979 Amidohydrolase family C2U40_24515 PF00491 Arginase family C2U40_24520 PF17392 Urocanase C-terminal domain C2U40_24520 PF17391 Urocanase N-terminal domain C2U40_24520 PF01175 Urocanase Rossmann-like domain C2U40_24525 PF00221 Aromatic amino acid lyase C2U40_24530 PF01699 Sodium/calcium exchanger protein C2U40_24535 PF12792 CSS motif domain associated with EAL C2U40_24535 PF00563 EAL domain C2U40_24540 PF00990 Diguanylate cyclase, GGDEF domain C2U40_24540 PF17157 Gammaproteobacterial periplasmic sensor domain C2U40_24540 PF00563 EAL domain C2U40_24555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2U40_24570 PF03432 Relaxase/Mobilisation nuclease domain C2U40_24580 PF00239 Resolvase, N terminal domain C2U40_24580 PF02796 Helix-turn-helix domain of resolvase C2U40_24585 PF07669 Eco57I restriction-modification methylase C2U40_24585 PF12950 TaqI-like C-terminal specificity domain C2U40_24590 PF04555 Restriction endonuclease XhoI C2U40_24665 PF07015 VirC1 protein C2U40_24695 PF00376 MerR family regulatory protein C2U40_24695 PF09278 MerR, DNA binding C2U40_24715 PF00929 Exonuclease C2U40_24725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2U40_24740 PF03432 Relaxase/Mobilisation nuclease domain C2U40_24805 PF00239 Resolvase, N terminal domain C2U40_24805 PF02796 Helix-turn-helix domain of resolvase C2U40_24815 PF01609 Transposase DDE domain C2U40_24825 PF01609 Transposase DDE domain C2U40_24835 PF13614 AAA domain C2U40_24840 PF04221 RelB antitoxin C2U40_24845 PF05016 ParE toxin of type II toxin-antitoxin system, parDE C2U40_24880 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C2U40_24880 PF14850 DNA-binding domain of Proline dehydrogenase C2U40_24880 PF00171 Aldehyde dehydrogenase family C2U40_24880 PF01619 Proline dehydrogenase C2U40_24900 PF02796 Helix-turn-helix domain of resolvase C2U40_24900 PF00239 Resolvase, N terminal domain C2U40_24915 PF13700 Domain of unknown function (DUF4158) C2U40_24915 PF01526 Tn3 transposase DDE domain C2U40_24925 PF00403 Heavy-metal-associated domain C2U40_24940 PF00376 MerR family regulatory protein C2U40_24940 PF09278 MerR, DNA binding C2U40_24960 PF00929 Exonuclease C2U40_24970 PF02796 Helix-turn-helix domain of resolvase C2U40_24970 PF00239 Resolvase, N terminal domain C2U40_24980 PF09278 MerR, DNA binding C2U40_24980 PF00376 MerR family regulatory protein C2U40_24995 PF00403 Heavy-metal-associated domain C2U40_25005 PF01526 Tn3 transposase DDE domain C2U40_25005 PF13700 Domain of unknown function (DUF4158) C2U40_25020 PF00239 Resolvase, N terminal domain C2U40_25020 PF02796 Helix-turn-helix domain of resolvase C2U40_25030 PF00239 Resolvase, N terminal domain C2U40_25030 PF02796 Helix-turn-helix domain of resolvase C2U40_25040 PF00145 C-5 cytosine-specific DNA methylase C2U40_25060 PF13180 PDZ domain C2U40_25075 PF03389 MobA/MobL family C2U40_25075 PF01443 Viral (Superfamily 1) RNA helicase C2U40_25075 PF17841 BID domain of Bartonella effector protein (Bep) C2U40_25080 PF07820 TraC-like protein C2U40_25090 PF02534 Type IV secretory system Conjugative DNA transfer C2U40_25100 PF11740 Plasmid replication region DNA-binding N-term C2U40_25115 PF13614 AAA domain C2U40_25115 PF00376 MerR family regulatory protein C2U40_25130 PF08447 PAS fold C2U40_25130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_25155 PF00239 Resolvase, N terminal domain C2U40_25155 PF02796 Helix-turn-helix domain of resolvase C2U40_25165 PF00665 Integrase core domain C2U40_25170 PF00665 Integrase core domain C2U40_25170 PF13333 Integrase core domain C2U40_25170 PF01527 Transposase C2U40_25170 PF13276 HTH-like domain C2U40_25190 PF13610 DDE domain C2U40_25210 PF08447 PAS fold C2U40_25210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U40_25245 PF01609 Transposase DDE domain C2U40_25245 PF13006 Insertion element 4 transposase N-terminal C2U40_25250 PF01610 Transposase C2U40_25250 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_25250 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_25285 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_25285 PF01610 Transposase C2U40_25285 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_25370 PF00563 EAL domain C2U40_25430 PF18607 ParA helix turn helix domain C2U40_25430 PF13614 AAA domain C2U40_25465 PF00712 DNA polymerase III beta subunit, N-terminal domain C2U40_25465 PF02767 DNA polymerase III beta subunit, central domain C2U40_25465 PF02768 DNA polymerase III beta subunit, C-terminal domain C2U40_25470 PF17762 HTH domain found in ParB protein C2U40_25470 PF02195 ParB-like nuclease domain C2U40_25480 PF01610 Transposase C2U40_25480 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C2U40_25480 PF13542 Helix-turn-helix domain of transposase family ISL3 C2U40_25520 PF00816 H-NS histone family C2U40_25540 PF07655 Secretin N-terminal domain C2U40_25540 PF00263 Bacterial type II and III secretion system protein C2U40_25550 PF00437 Type II/IV secretion system protein C2U40_25765 PF11740 Plasmid replication region DNA-binding N-term C2U40_25770 PF02899 Phage integrase, N-terminal SAM-like domain C2U40_25770 PF00589 Phage integrase family C2U40_25870 PF13438 Domain of unknown function (DUF4113) C2U40_25870 PF11799 impB/mucB/samB family C-terminal domain C2U40_25870 PF00817 impB/mucB/samB family C2U40_25875 PF00717 Peptidase S24-like C2U40_25885 PF13700 Domain of unknown function (DUF4158) C2U40_25885 PF01526 Tn3 transposase DDE domain C2U40_25890 PF00239 Resolvase, N terminal domain C2U40_25890 PF02796 Helix-turn-helix domain of resolvase C2U40_25895 PF00589 Phage integrase family C2U40_25895 PF13495 Phage integrase, N-terminal SAM-like domain C2U40_25900 PF10706 Aminoglycoside-2''-adenylyltransferase C2U40_25905 PF07690 Major Facilitator Superfamily C2U40_25910 PF00132 Bacterial transferase hexapeptide (six repeats) C2U40_25920 PF00893 Small Multidrug Resistance protein C2U40_25925 PF00809 Pterin binding enzyme C2U40_25940 PF00376 MerR family regulatory protein C2U40_25940 PF09278 MerR, DNA binding C2U40_25955 PF00403 Heavy-metal-associated domain