locus-tag class description C2U47_00005 PF03707 Bacterial signalling protein N terminal repeat C2U47_00005 PF00563 EAL domain C2U47_00005 PF13188 PAS domain C2U47_00005 PF00990 Diguanylate cyclase, GGDEF domain C2U47_00015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_00015 PF03466 LysR substrate binding domain C2U47_00020 PF00072 Response regulator receiver domain C2U47_00020 PF00486 Transcriptional regulatory protein, C terminal C2U47_00030 PF01212 Beta-eliminating lyase C2U47_00045 PF00248 Aldo/keto reductase family C2U47_00050 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C2U47_00060 PF03411 Penicillin-insensitive murein endopeptidase C2U47_00070 PF04536 TPM domain C2U47_00095 PF13358 DDE superfamily endonuclease C2U47_00095 PF13592 Winged helix-turn helix C2U47_00150 PF00665 Integrase core domain C2U47_00155 PF01695 IstB-like ATP binding protein C2U47_00185 PF01618 MotA/TolQ/ExbB proton channel family C2U47_00190 PF00691 OmpA family C2U47_00190 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U47_00195 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C2U47_00200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2U47_00215 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2U47_00215 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C2U47_00220 PF00384 Molybdopterin oxidoreductase C2U47_00220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2U47_00220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U47_00225 PF00146 NADH dehydrogenase C2U47_00230 PF12838 4Fe-4S dicluster domain C2U47_00235 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C2U47_00240 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C2U47_00245 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C2U47_00245 PF00361 Proton-conducting membrane transporter C2U47_00250 PF00361 Proton-conducting membrane transporter C2U47_00255 PF00361 Proton-conducting membrane transporter C2U47_00260 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C2U47_00260 PF02769 AIR synthase related protein, C-terminal domain C2U47_00260 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C2U47_00265 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_00265 PF01464 Transglycosylase SLT domain C2U47_00275 PF07191 zinc-ribbons C2U47_00280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C2U47_00280 PF01926 50S ribosome-binding GTPase C2U47_00285 PF13360 PQQ-like domain C2U47_00290 PF09976 Tetratricopeptide repeat-like domain C2U47_00295 PF03129 Anticodon binding domain C2U47_00295 PF13393 Histidyl-tRNA synthetase C2U47_00300 PF04551 GcpE protein C2U47_00305 PF13464 Domain of unknown function (DUF4115) C2U47_00315 PF04055 Radical SAM superfamily C2U47_00320 PF00334 Nucleoside diphosphate kinase C2U47_00325 PF12404 Peptidase C2U47_00325 PF00883 Cytosol aminopeptidase family, catalytic domain C2U47_00330 PF00883 Cytosol aminopeptidase family, catalytic domain C2U47_00330 PF12404 Peptidase C2U47_00335 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U47_00340 PF00012 Hsp70 protein C2U47_00350 PF01521 Iron-sulphur cluster biosynthesis C2U47_00355 PF01592 NifU-like N terminal domain C2U47_00360 PF00266 Aminotransferase class-V C2U47_00365 PF02082 Transcriptional regulator C2U47_00370 PF00588 SpoU rRNA Methylase family C2U47_00390 PF07719 Tetratricopeptide repeat C2U47_00390 PF13181 Tetratricopeptide repeat C2U47_00395 PF00581 Rhodanese-like domain C2U47_00400 PF02355 Protein export membrane protein C2U47_00400 PF07549 SecD/SecF GG Motif C2U47_00405 PF02355 Protein export membrane protein C2U47_00405 PF13721 SecD export protein N-terminal TM region C2U47_00405 PF07549 SecD/SecF GG Motif C2U47_00410 PF02699 Preprotein translocase subunit C2U47_00415 PF01702 Queuine tRNA-ribosyltransferase C2U47_00420 PF02547 Queuosine biosynthesis protein C2U47_00425 PF00571 CBS domain C2U47_00430 PF10417 C-terminal domain of 1-Cys peroxiredoxin C2U47_00430 PF00578 AhpC/TSA family C2U47_00435 PF13192 Thioredoxin domain C2U47_00435 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_00450 PF00668 Condensation domain C2U47_00450 PF13193 AMP-binding enzyme C-terminal domain C2U47_00450 PF00501 AMP-binding enzyme C2U47_00450 PF08241 Methyltransferase domain C2U47_00450 PF00975 Thioesterase domain C2U47_00450 PF00550 Phosphopantetheine attachment site C2U47_00450 PF00391 PEP-utilising enzyme, mobile domain C2U47_00500 PF01609 Transposase DDE domain C2U47_00520 PF11867 Domain of unknown function (DUF3387) C2U47_00520 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U47_00520 PF18766 SWI2/SNF2 ATPase C2U47_00525 PF05762 VWA domain containing CoxE-like protein C2U47_00530 PF17868 AAA lid domain C2U47_00530 PF12592 Protein of unknown function (DUF3763) C2U47_00530 PF07728 AAA domain (dynein-related subfamily) C2U47_00535 PF02810 SEC-C motif C2U47_00535 PF03695 Uncharacterised protein family (UPF0149) C2U47_00545 PF12161 HsdM N-terminal domain C2U47_00545 PF02384 N-6 DNA Methylase C2U47_00555 PF02347 Glycine cleavage system P-protein C2U47_00560 PF01597 Glycine cleavage H-protein C2U47_00565 PF08669 Glycine cleavage T-protein C-terminal barrel domain C2U47_00565 PF01571 Aminomethyltransferase folate-binding domain C2U47_00570 PF01494 FAD binding domain C2U47_00575 PF01494 FAD binding domain C2U47_00580 PF03695 Uncharacterised protein family (UPF0149) C2U47_00585 PF05164 Cell division protein ZapA C2U47_00595 PF07690 Major Facilitator Superfamily C2U47_00600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U47_00600 PF00005 ABC transporter C2U47_00605 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U47_00605 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_00610 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_00620 PF00043 Glutathione S-transferase, C-terminal domain C2U47_00620 PF02798 Glutathione S-transferase, N-terminal domain C2U47_00625 PF00043 Glutathione S-transferase, C-terminal domain C2U47_00625 PF02798 Glutathione S-transferase, N-terminal domain C2U47_00635 PF00459 Inositol monophosphatase family C2U47_00640 PF00691 OmpA family C2U47_00640 PF18393 MotY N-terminal domain C2U47_00645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_00645 PF12729 Four helix bundle sensory module for signal transduction C2U47_00645 PF00672 HAMP domain C2U47_00650 PF00929 Exonuclease C2U47_00655 PF03553 Na+/H+ antiporter family C2U47_00655 PF13726 Na+-H+ antiporter family C2U47_00660 PF07690 Major Facilitator Superfamily C2U47_00665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_00665 PF03466 LysR substrate binding domain C2U47_00670 PF08448 PAS fold C2U47_00670 PF08447 PAS fold C2U47_00670 PF00990 Diguanylate cyclase, GGDEF domain C2U47_00670 PF00563 EAL domain C2U47_00680 PF00271 Helicase conserved C-terminal domain C2U47_00680 PF03880 DbpA RNA binding domain C2U47_00680 PF00270 DEAD/DEAH box helicase C2U47_00685 PF03061 Thioesterase superfamily C2U47_00695 PF01565 FAD binding domain C2U47_00695 PF13183 4Fe-4S dicluster domain C2U47_00695 PF02913 FAD linked oxidases, C-terminal domain C2U47_00710 PF03471 Transporter associated domain C2U47_00710 PF03741 Integral membrane protein TerC family C2U47_00715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U47_00720 PF00107 Zinc-binding dehydrogenase C2U47_00720 PF08240 Alcohol dehydrogenase GroES-like domain C2U47_00725 PF00962 Adenosine/AMP deaminase C2U47_00730 PF13344 Haloacid dehalogenase-like hydrolase C2U47_00740 PF00733 Asparagine synthase C2U47_00740 PF13537 Glutamine amidotransferase domain C2U47_00755 PF02798 Glutathione S-transferase, N-terminal domain C2U47_00755 PF14497 Glutathione S-transferase, C-terminal domain C2U47_00765 PF04209 homogentisate 1,2-dioxygenase C2U47_00770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U47_00780 PF00849 RNA pseudouridylate synthase C2U47_00785 PF00990 Diguanylate cyclase, GGDEF domain C2U47_00785 PF13426 PAS domain C2U47_00785 PF00563 EAL domain C2U47_00790 PF08447 PAS fold C2U47_00790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_00800 PF00285 Citrate synthase, C-terminal domain C2U47_00805 PF00330 Aconitase family (aconitate hydratase) C2U47_00805 PF00694 Aconitase C-terminal domain C2U47_00820 PF07660 Secretin and TonB N terminus short domain C2U47_00820 PF00593 TonB dependent receptor C2U47_00820 PF07715 TonB-dependent Receptor Plug Domain C2U47_00830 PF01027 Inhibitor of apoptosis-promoting Bax1 C2U47_00835 PF12805 FUSC-like inner membrane protein yccS C2U47_00840 PF04358 DsrC like protein C2U47_00845 PF05036 Sporulation related domain C2U47_00850 PF08245 Mur ligase middle domain C2U47_00850 PF02875 Mur ligase family, glutamate ligase domain C2U47_00855 PF01039 Carboxyl transferase domain C2U47_00855 PF17848 Acetyl-coA carboxylase zinc finger domain C2U47_00860 PF01416 tRNA pseudouridine synthase C2U47_00870 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U47_00870 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U47_00875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U47_00875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U47_00875 PF11890 Domain of unknown function (DUF3410) C2U47_00885 PF03180 NLPA lipoprotein C2U47_00915 PF00005 ABC transporter C2U47_00920 PF00391 PEP-utilising enzyme, mobile domain C2U47_00920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C2U47_00920 PF02896 PEP-utilising enzyme, TIM barrel domain C2U47_00925 PF03618 Kinase/pyrophosphorylase C2U47_00935 PF00324 Amino acid permease C2U47_01005 PF03412 Peptidase C39 family C2U47_01005 PF00005 ABC transporter C2U47_01005 PF00664 ABC transporter transmembrane region C2U47_01010 PF04055 Radical SAM superfamily C2U47_01010 PF16199 Radical_SAM C-terminal domain C2U47_01015 PF01493 GXGXG motif C2U47_01015 PF00310 Glutamine amidotransferases class-II C2U47_01015 PF04898 Glutamate synthase central domain C2U47_01015 PF01645 Conserved region in glutamate synthase C2U47_01020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C2U47_01020 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_01030 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_01035 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_01060 PF14521 Lysine-specific metallo-endopeptidase C2U47_01070 PF00270 DEAD/DEAH box helicase C2U47_01070 PF00271 Helicase conserved C-terminal domain C2U47_01095 PF07759 Protein of unknown function (DUF1615) C2U47_01100 PF00990 Diguanylate cyclase, GGDEF domain C2U47_01105 PF08502 LeuA allosteric (dimerisation) domain C2U47_01105 PF00682 HMGL-like C2U47_01110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U47_01110 PF02142 MGS-like domain C2U47_01110 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2U47_01115 PF00117 Glutamine amidotransferase class-I C2U47_01115 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C2U47_01120 PF01113 Dihydrodipicolinate reductase, N-terminus C2U47_01120 PF05173 Dihydrodipicolinate reductase, C-terminus C2U47_01130 PF01812 5-formyltetrahydrofolate cyclo-ligase family C2U47_01135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C2U47_01140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U47_01140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U47_01140 PF01842 ACT domain C2U47_01145 PF01219 Prokaryotic diacylglycerol kinase C2U47_01150 PF00793 DAHP synthetase I family C2U47_01155 PF00005 ABC transporter C2U47_01160 PF01032 FecCD transport family C2U47_01195 PF01253 Translation initiation factor SUI1 C2U47_01200 PF01169 Uncharacterized protein family UPF0016 C2U47_01240 PF02463 RecF/RecN/SMC N terminal domain C2U47_01265 PF09190 DALR domain C2U47_01265 PF01406 tRNA synthetases class I (C) catalytic domain C2U47_01270 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2U47_01280 PF00149 Calcineurin-like phosphoesterase C2U47_01285 PF04226 Transglycosylase associated protein C2U47_01290 PF16925 Tetracyclin repressor-like, C-terminal domain C2U47_01290 PF00440 Bacterial regulatory proteins, tetR family C2U47_01295 PF00107 Zinc-binding dehydrogenase C2U47_01295 PF08240 Alcohol dehydrogenase GroES-like domain C2U47_01305 PF01979 Amidohydrolase family C2U47_01310 PF03466 LysR substrate binding domain C2U47_01310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_01330 PF01066 CDP-alcohol phosphatidyltransferase C2U47_01335 PF01541 GIY-YIG catalytic domain C2U47_01335 PF08459 UvrC Helix-hairpin-helix N-terminal C2U47_01335 PF02151 UvrB/uvrC motif C2U47_01340 PF00072 Response regulator receiver domain C2U47_01340 PF00196 Bacterial regulatory proteins, luxR family C2U47_01345 PF02348 Cytidylyltransferase C2U47_01350 PF03966 Trm112p-like protein C2U47_01355 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C2U47_01360 PF00664 ABC transporter transmembrane region C2U47_01360 PF00005 ABC transporter C2U47_01365 PF03772 Competence protein C2U47_01365 PF00753 Metallo-beta-lactamase superfamily C2U47_01380 PF05872 Bacterial protein of unknown function (DUF853) C2U47_01385 PF00155 Aminotransferase class I and II C2U47_01395 PF13609 Gram-negative porin C2U47_01400 PF13307 Helicase C-terminal domain C2U47_01400 PF06733 DEAD_2 C2U47_01410 PF00850 Histone deacetylase domain C2U47_01415 PF07690 Major Facilitator Superfamily C2U47_01425 PF00245 Alkaline phosphatase C2U47_01430 PF00245 Alkaline phosphatase C2U47_01445 PF14760 Rnk N-terminus C2U47_01445 PF01272 Transcription elongation factor, GreA/GreB, C-term C2U47_01455 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_01460 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_01465 PF00005 ABC transporter C2U47_01470 PF04116 Fatty acid hydroxylase superfamily C2U47_01475 PF13520 Amino acid permease C2U47_01480 PF02607 B12 binding domain C2U47_01480 PF02310 B12 binding domain C2U47_01480 PF02965 Vitamin B12 dependent methionine synthase, activation domain C2U47_01480 PF00809 Pterin binding enzyme C2U47_01480 PF02574 Homocysteine S-methyltransferase C2U47_01495 PF00571 CBS domain C2U47_01495 PF03471 Transporter associated domain C2U47_01495 PF01595 Cyclin M transmembrane N-terminal domain C2U47_01500 PF01895 PhoU domain C2U47_01510 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_01515 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_01520 PF14437 MafB19-like deaminase C2U47_01535 PF01274 Malate synthase C2U47_01540 PF00463 Isocitrate lyase family C2U47_01545 PF00308 Bacterial dnaA protein C2U47_01560 PF02769 AIR synthase related protein, C-terminal domain C2U47_01560 PF00586 AIR synthase related protein, N-terminal domain C2U47_01565 PF00551 Formyl transferase C2U47_01570 PF01784 NIF3 (NGG1p interacting factor 3) C2U47_01575 PF00158 Sigma-54 interaction domain C2U47_01575 PF02954 Bacterial regulatory protein, Fis family C2U47_01585 PF00158 Sigma-54 interaction domain C2U47_01585 PF00072 Response regulator receiver domain C2U47_01585 PF02954 Bacterial regulatory protein, Fis family C2U47_01595 PF01842 ACT domain C2U47_01600 PF02503 Polyphosphate kinase middle domain C2U47_01600 PF17941 Polyphosphate kinase C-terminal domain 1 C2U47_01600 PF13090 Polyphosphate kinase C-terminal domain 2 C2U47_01600 PF13089 Polyphosphate kinase N-terminal domain C2U47_01605 PF02541 Ppx/GppA phosphatase family C2U47_01615 PF01385 Probable transposase C2U47_01615 PF12323 Helix-turn-helix domain C2U47_01615 PF07282 Putative transposase DNA-binding domain C2U47_01625 PF01769 Divalent cation transporter C2U47_01625 PF00571 CBS domain C2U47_01625 PF03448 MgtE intracellular N domain C2U47_01630 PF12323 Helix-turn-helix domain C2U47_01655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U47_01655 PF07196 Flagellin hook IN motif C2U47_01660 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C2U47_01660 PF10135 Rod binding protein C2U47_01665 PF02119 Flagellar P-ring protein C2U47_01670 PF02107 Flagellar L-ring protein C2U47_01675 PF00460 Flagella basal body rod protein C2U47_01675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U47_01680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U47_01680 PF00460 Flagella basal body rod protein C2U47_01685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U47_01685 PF00460 Flagella basal body rod protein C2U47_01685 PF07559 Flagellar basal body protein FlaE C2U47_01695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2U47_01695 PF00460 Flagella basal body rod protein C2U47_01700 PF00460 Flagella basal body rod protein C2U47_01705 PF03705 CheR methyltransferase, all-alpha domain C2U47_01705 PF01739 CheR methyltransferase, SAM binding domain C2U47_01710 PF01584 CheW-like domain C2U47_01710 PF00072 Response regulator receiver domain C2U47_01715 PF13144 Chaperone for flagella basal body P-ring formation C2U47_01730 PF12850 Calcineurin-like phosphoesterase superfamily domain C2U47_01735 PF07282 Putative transposase DNA-binding domain C2U47_01735 PF01385 Probable transposase C2U47_01735 PF12323 Helix-turn-helix domain C2U47_01745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_01755 PF01479 S4 domain C2U47_01755 PF00849 RNA pseudouridylate synthase C2U47_01760 PF01966 HD domain C2U47_01765 PF01385 Probable transposase C2U47_01765 PF12323 Helix-turn-helix domain C2U47_01765 PF07282 Putative transposase DNA-binding domain C2U47_01775 PF00892 EamA-like transporter family C2U47_01780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_01790 PF02371 Transposase IS116/IS110/IS902 family C2U47_01790 PF01548 Transposase C2U47_01815 PF00313 'Cold-shock' DNA-binding domain C2U47_01820 PF00364 Biotin-requiring enzyme C2U47_01820 PF02817 e3 binding domain C2U47_01820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U47_01825 PF02780 Transketolase, C-terminal domain C2U47_01825 PF02779 Transketolase, pyrimidine binding domain C2U47_01830 PF00676 Dehydrogenase E1 component C2U47_01835 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C2U47_01845 PF05472 DNA replication terminus site-binding protein (Ter protein) C2U47_01850 PF00176 SNF2 family N-terminal domain C2U47_01850 PF00271 Helicase conserved C-terminal domain C2U47_01850 PF04434 SWIM zinc finger C2U47_01855 PF04337 Protein of unknown function, DUF480 C2U47_01865 PF06082 Exopolysaccharide biosynthesis protein YbjH C2U47_01870 PF06251 Capsule biosynthesis GfcC C2U47_01885 PF13807 G-rich domain on putative tyrosine kinase C2U47_01885 PF02706 Chain length determinant protein C2U47_01885 PF13614 AAA domain C2U47_01890 PF01451 Low molecular weight phosphotyrosine protein phosphatase C2U47_01895 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C2U47_01895 PF10531 SLBB domain C2U47_01895 PF02563 Polysaccharide biosynthesis/export protein C2U47_01900 PF13592 Winged helix-turn helix C2U47_01900 PF13358 DDE superfamily endonuclease C2U47_01910 PF13439 Glycosyltransferase Family 4 C2U47_01910 PF00534 Glycosyl transferases group 1 C2U47_01915 PF00535 Glycosyl transferase family 2 C2U47_01920 PF00535 Glycosyl transferase family 2 C2U47_01935 PF01943 Polysaccharide biosynthesis protein C2U47_01935 PF14667 Polysaccharide biosynthesis C-terminal domain C2U47_01940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C2U47_01945 PF00483 Nucleotidyl transferase C2U47_01950 PF04321 RmlD substrate binding domain C2U47_01955 PF16363 GDP-mannose 4,6 dehydratase C2U47_01975 PF13737 Transposase DDE domain C2U47_01985 PF02719 Polysaccharide biosynthesis protein C2U47_01995 PF01370 NAD dependent epimerase/dehydratase family C2U47_02015 PF00005 ABC transporter C2U47_02020 PF01061 ABC-2 type transporter C2U47_02025 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C2U47_02030 PF00483 Nucleotidyl transferase C2U47_02035 PF04321 RmlD substrate binding domain C2U47_02040 PF16363 GDP-mannose 4,6 dehydratase C2U47_02045 PF00486 Transcriptional regulatory protein, C terminal C2U47_02045 PF00072 Response regulator receiver domain C2U47_02050 PF08918 PhoQ Sensor C2U47_02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_02055 PF02685 Glucokinase C2U47_02060 PF01380 SIS domain C2U47_02060 PF01418 Helix-turn-helix domain, rpiR family C2U47_02065 PF00224 Pyruvate kinase, barrel domain C2U47_02065 PF02887 Pyruvate kinase, alpha/beta domain C2U47_02075 PF00873 AcrB/AcrD/AcrF family C2U47_02080 PF09317 Domain of unknown function (DUF1974) C2U47_02080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U47_02080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U47_02080 PF02770 Acyl-CoA dehydrogenase, middle domain C2U47_02085 PF00440 Bacterial regulatory proteins, tetR family C2U47_02145 PF02321 Outer membrane efflux protein C2U47_02160 PF08361 MAATS-type transcriptional repressor, C-terminal region C2U47_02160 PF00440 Bacterial regulatory proteins, tetR family C2U47_02170 PF00375 Sodium:dicarboxylate symporter family C2U47_02185 PF01479 S4 domain C2U47_02185 PF00849 RNA pseudouridylate synthase C2U47_02190 PF04079 Segregation and condensation complex subunit ScpB C2U47_02195 PF02616 Segregation and condensation protein ScpA C2U47_02200 PF01300 Telomere recombination C2U47_02205 PF02811 PHP domain C2U47_02210 PF00425 chorismate binding enzyme C2U47_02210 PF04715 Anthranilate synthase component I, N terminal region C2U47_02215 PF00591 Glycosyl transferase family, a/b domain C2U47_02215 PF02885 Glycosyl transferase family, helical bundle domain C2U47_02215 PF00117 Glutamine amidotransferase class-I C2U47_02220 PF00591 Glycosyl transferase family, a/b domain C2U47_02220 PF02885 Glycosyl transferase family, helical bundle domain C2U47_02225 PF00218 Indole-3-glycerol phosphate synthase C2U47_02225 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C2U47_02230 PF00291 Pyridoxal-phosphate dependent enzyme C2U47_02235 PF00290 Tryptophan synthase alpha chain C2U47_02245 PF00669 Bacterial flagellin N-terminal helical region C2U47_02245 PF07196 Flagellin hook IN motif C2U47_02245 PF00700 Bacterial flagellin C-terminal helical region C2U47_02250 PF01381 Helix-turn-helix C2U47_02255 PF13657 HipA N-terminal domain C2U47_02255 PF07804 HipA-like C-terminal domain C2U47_02280 PF03466 LysR substrate binding domain C2U47_02280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_02290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C2U47_02295 PF00005 ABC transporter C2U47_02300 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_02305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C2U47_02310 PF01609 Transposase DDE domain C2U47_02310 PF13006 Insertion element 4 transposase N-terminal C2U47_02315 PF07237 Protein of unknown function (DUF1428) C2U47_02320 PF07690 Major Facilitator Superfamily C2U47_02325 PF01040 UbiA prenyltransferase family C2U47_02330 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C2U47_02335 PF00510 Cytochrome c oxidase subunit III C2U47_02340 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2U47_02345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C2U47_02345 PF06481 COX Aromatic Rich Motif C2U47_02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_02355 PF03466 LysR substrate binding domain C2U47_02365 PF01156 Inosine-uridine preferring nucleoside hydrolase C2U47_02370 PF12323 Helix-turn-helix domain C2U47_02370 PF01385 Probable transposase C2U47_02370 PF07282 Putative transposase DNA-binding domain C2U47_02385 PF01047 MarR family C2U47_02400 PF00127 Copper binding proteins, plastocyanin/azurin family C2U47_02405 PF02424 ApbE family C2U47_02410 PF00011 Hsp20/alpha crystallin family C2U47_02415 PF00072 Response regulator receiver domain C2U47_02425 PF03372 Endonuclease/Exonuclease/phosphatase family C2U47_02430 PF13006 Insertion element 4 transposase N-terminal C2U47_02430 PF01609 Transposase DDE domain C2U47_02440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_02440 PF00529 HlyD membrane-fusion protein of T1SS C2U47_02445 PF00873 AcrB/AcrD/AcrF family C2U47_02460 PF10437 Bacterial lipoate protein ligase C-terminus C2U47_02460 PF03099 Biotin/lipoate A/B protein ligase family C2U47_02470 PF00873 AcrB/AcrD/AcrF family C2U47_02485 PF04143 Sulphur transport C2U47_02490 PF01022 Bacterial regulatory protein, arsR family C2U47_02500 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_02510 PF02308 MgtC family C2U47_02515 PF00356 Bacterial regulatory proteins, lacI family C2U47_02515 PF13407 Periplasmic binding protein domain C2U47_02520 PF08244 Glycosyl hydrolases family 32 C terminal C2U47_02520 PF00251 Glycosyl hydrolases family 32 N-terminal domain C2U47_02525 PF00367 phosphotransferase system, EIIB C2U47_02525 PF02378 Phosphotransferase system, EIIC C2U47_02530 PF00294 pfkB family carbohydrate kinase C2U47_02535 PF02264 LamB porin C2U47_02535 PF11471 Maltoporin periplasmic N-terminal extension C2U47_02540 PF00226 DnaJ domain C2U47_02540 PF00684 DnaJ central domain C2U47_02540 PF01556 DnaJ C terminal domain C2U47_02545 PF00012 Hsp70 protein C2U47_02550 PF01025 GrpE C2U47_02555 PF01513 ATP-NAD kinase C2U47_02565 PF02463 RecF/RecN/SMC N terminal domain C2U47_02575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_02580 PF12704 MacB-like periplasmic core domain C2U47_02580 PF02687 FtsX-like permease family C2U47_02580 PF00005 ABC transporter C2U47_02585 PF02321 Outer membrane efflux protein C2U47_02590 PF08021 Siderophore-interacting FAD-binding domain C2U47_02590 PF04954 Siderophore-interacting protein C2U47_02595 PF00793 DAHP synthetase I family C2U47_02600 PF00816 H-NS histone family C2U47_02605 PF03466 LysR substrate binding domain C2U47_02605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_02610 PF00291 Pyridoxal-phosphate dependent enzyme C2U47_02620 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U47_02655 PF00583 Acetyltransferase (GNAT) family C2U47_02660 PF00849 RNA pseudouridylate synthase C2U47_02665 PF00293 NUDIX domain C2U47_02675 PF04356 Protein of unknown function (DUF489) C2U47_02680 PF00206 Lyase C2U47_02680 PF08328 Adenylosuccinate lyase C-terminal C2U47_02685 PF08007 Cupin superfamily protein C2U47_02690 PF02887 Pyruvate kinase, alpha/beta domain C2U47_02690 PF00224 Pyruvate kinase, barrel domain C2U47_02695 PF12794 Mechanosensitive ion channel inner membrane domain 1 C2U47_02695 PF12795 Mechanosensitive ion channel porin domain C2U47_02695 PF00924 Mechanosensitive ion channel C2U47_02700 PF01810 LysE type translocator C2U47_02705 PF10282 Lactonase, 7-bladed beta-propeller C2U47_02715 PF00860 Permease family C2U47_02730 PF12804 MobA-like NTP transferase domain C2U47_02740 PF04632 Fusaric acid resistance protein family C2U47_02755 PF08447 PAS fold C2U47_02755 PF13426 PAS domain C2U47_02755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_02775 PF05114 Protein of unknown function (DUF692) C2U47_02785 PF02028 BCCT, betaine/carnitine/choline family transporter C2U47_02800 PF05598 Transposase domain (DUF772) C2U47_02800 PF01609 Transposase DDE domain C2U47_02820 PF14821 Threonine synthase N terminus C2U47_02820 PF00291 Pyridoxal-phosphate dependent enzyme C2U47_02825 PF08544 GHMP kinases C terminal C2U47_02825 PF00288 GHMP kinases N terminal domain C2U47_02830 PF00742 Homoserine dehydrogenase C2U47_02830 PF00696 Amino acid kinase family C2U47_02830 PF13840 ACT domain C2U47_02830 PF01842 ACT domain C2U47_02830 PF03447 Homoserine dehydrogenase, NAD binding domain C2U47_02840 PF00588 SpoU rRNA Methylase family C2U47_02845 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C2U47_02860 PF03737 Aldolase/RraA C2U47_02870 PF00072 Response regulator receiver domain C2U47_02870 PF00486 Transcriptional regulatory protein, C terminal C2U47_02885 PF00005 ABC transporter C2U47_02885 PF00664 ABC transporter transmembrane region C2U47_02890 PF00005 ABC transporter C2U47_02890 PF00664 ABC transporter transmembrane region C2U47_02910 PF01980 tRNA-methyltransferase O C2U47_02910 PF18389 TrmO C-terminal domain C2U47_02915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2U47_02915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2U47_02925 PF06480 FtsH Extracellular C2U47_02925 PF00004 ATPase family associated with various cellular activities (AAA) C2U47_02925 PF17862 AAA+ lid domain C2U47_02925 PF01434 Peptidase family M41 C2U47_02930 PF00291 Pyridoxal-phosphate dependent enzyme C2U47_02935 PF00381 PTS HPr component phosphorylation site C2U47_02940 PF00391 PEP-utilising enzyme, mobile domain C2U47_02940 PF05524 PEP-utilising enzyme, N-terminal C2U47_02940 PF02896 PEP-utilising enzyme, TIM barrel domain C2U47_02945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U47_02950 PF01292 Prokaryotic cytochrome b561 C2U47_02955 PF01609 Transposase DDE domain C2U47_02955 PF13006 Insertion element 4 transposase N-terminal C2U47_02965 PF00149 Calcineurin-like phosphoesterase C2U47_02965 PF12320 Type 5 capsule protein repressor C-terminal domain C2U47_02975 PF04381 Putative exonuclease, RdgC C2U47_02990 PF02254 TrkA-N domain C2U47_02990 PF00999 Sodium/hydrogen exchanger family C2U47_02995 PF00072 Response regulator receiver domain C2U47_02995 PF00158 Sigma-54 interaction domain C2U47_02995 PF02954 Bacterial regulatory protein, Fis family C2U47_03000 PF01609 Transposase DDE domain C2U47_03030 PF01266 FAD dependent oxidoreductase C2U47_03035 PF01381 Helix-turn-helix C2U47_03035 PF07883 Cupin domain C2U47_03040 PF00171 Aldehyde dehydrogenase family C2U47_03045 PF00202 Aminotransferase class-III C2U47_03050 PF00324 Amino acid permease C2U47_03055 PF13520 Amino acid permease C2U47_03065 PF02690 Na+/Pi-cotransporter C2U47_03070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U47_03070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U47_03075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C2U47_03085 PF10725 Protein of unknown function (DUF2517) C2U47_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_03105 PF00072 Response regulator receiver domain C2U47_03105 PF09308 LuxQ, periplasmic C2U47_03105 PF00512 His Kinase A (phospho-acceptor) domain C2U47_03115 PF17969 L,D-transpeptidase C-terminal domain C2U47_03115 PF01476 LysM domain C2U47_03115 PF03734 L,D-transpeptidase catalytic domain C2U47_03135 PF05971 RNA methyltransferase C2U47_03140 PF00877 NlpC/P60 family C2U47_03145 PF01648 4'-phosphopantetheinyl transferase superfamily C2U47_03150 PF00085 Thioredoxin C2U47_03160 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C2U47_03165 PF00551 Formyl transferase C2U47_03165 PF01842 ACT domain C2U47_03175 PF13091 PLD-like domain C2U47_03175 PF13396 Phospholipase_D-nuclease N-terminal C2U47_03190 PF10145 Phage-related minor tail protein C2U47_03190 PF01551 Peptidase family M23 C2U47_03190 PF01464 Transglycosylase SLT domain C2U47_03200 PF00230 Major intrinsic protein C2U47_03205 PF02075 Crossover junction endodeoxyribonuclease RuvC C2U47_03210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U47_03230 PF11842 Domain of unknown function (DUF3362) C2U47_03230 PF04055 Radical SAM superfamily C2U47_03230 PF08497 Radical SAM N-terminal C2U47_03235 PF00873 AcrB/AcrD/AcrF family C2U47_03245 PF17158 Membrane-associated sensor, integral membrane domain C2U47_03245 PF00990 Diguanylate cyclase, GGDEF domain C2U47_03250 PF01734 Patatin-like phospholipase C2U47_03270 PF00691 OmpA family C2U47_03270 PF01389 OmpA-like transmembrane domain C2U47_03275 PF01389 OmpA-like transmembrane domain C2U47_03275 PF00691 OmpA family C2U47_03280 PF00691 OmpA family C2U47_03280 PF01389 OmpA-like transmembrane domain C2U47_03285 PF03949 Malic enzyme, NAD binding domain C2U47_03285 PF00390 Malic enzyme, N-terminal domain C2U47_03290 PF12833 Helix-turn-helix domain C2U47_03295 PF01554 MatE C2U47_03300 PF10692 Protein of unknown function (DUF2498) C2U47_03305 PF00072 Response regulator receiver domain C2U47_03305 PF00990 Diguanylate cyclase, GGDEF domain C2U47_03320 PF01235 Sodium:alanine symporter family C2U47_03325 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U47_03325 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2U47_03330 PF01699 Sodium/calcium exchanger protein C2U47_03335 PF08534 Redoxin C2U47_03340 PF00293 NUDIX domain C2U47_03350 PF00005 ABC transporter C2U47_03355 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_03360 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_03365 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_03380 PF00005 ABC transporter C2U47_03385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U47_03385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U47_03405 PF03932 CutC family C2U47_03410 PF00480 ROK family C2U47_03420 PF01435 Peptidase family M48 C2U47_03425 PF12849 PBP superfamily domain C2U47_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_03430 PF00512 His Kinase A (phospho-acceptor) domain C2U47_03430 PF11808 Phosphate regulon sensor protein PhoR C2U47_03430 PF00989 PAS fold C2U47_03435 PF00072 Response regulator receiver domain C2U47_03435 PF00486 Transcriptional regulatory protein, C terminal C2U47_03440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U47_03445 PF00990 Diguanylate cyclase, GGDEF domain C2U47_03445 PF17158 Membrane-associated sensor, integral membrane domain C2U47_03455 PF00171 Aldehyde dehydrogenase family C2U47_03465 PF00892 EamA-like transporter family C2U47_03475 PF00248 Aldo/keto reductase family C2U47_03485 PF12431 Transcriptional regulator C2U47_03485 PF00072 Response regulator receiver domain C2U47_03490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C2U47_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_03490 PF00989 PAS fold C2U47_03490 PF17203 Single cache domain 3 C2U47_03495 PF01047 MarR family C2U47_03500 PF00529 HlyD membrane-fusion protein of T1SS C2U47_03500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_03520 PF01679 Proteolipid membrane potential modulator C2U47_03530 PF13597 Anaerobic ribonucleoside-triphosphate reductase C2U47_03530 PF03477 ATP cone domain C2U47_03540 PF01653 NAD-dependent DNA ligase adenylation domain C2U47_03540 PF00533 BRCA1 C Terminus (BRCT) domain C2U47_03540 PF03120 NAD-dependent DNA ligase OB-fold domain C2U47_03540 PF12826 Helix-hairpin-helix motif C2U47_03540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C2U47_03545 PF04354 ZipA, C-terminal FtsZ-binding domain C2U47_03560 PF03458 UPF0126 domain C2U47_03570 PF05951 Bacterial protein of unknown function (DUF882) C2U47_03575 PF01471 Putative peptidoglycan binding domain C2U47_03575 PF03734 L,D-transpeptidase catalytic domain C2U47_03590 PF00535 Glycosyl transferase family 2 C2U47_03605 PF00128 Alpha amylase, catalytic domain C2U47_03615 PF00072 Response regulator receiver domain C2U47_03615 PF00196 Bacterial regulatory proteins, luxR family C2U47_03645 PF00999 Sodium/hydrogen exchanger family C2U47_03645 PF02080 TrkA-C domain C2U47_03645 PF02254 TrkA-N domain C2U47_03650 PF00990 Diguanylate cyclase, GGDEF domain C2U47_03655 PF01171 PP-loop family C2U47_03655 PF11734 TilS substrate C-terminal domain C2U47_03655 PF09179 TilS substrate binding domain C2U47_03660 PF01431 Peptidase family M13 C2U47_03660 PF05649 Peptidase family M13 C2U47_03670 PF12848 ABC transporter C2U47_03670 PF16326 ABC transporter C-terminal domain C2U47_03670 PF00005 ABC transporter C2U47_03680 PF13520 Amino acid permease C2U47_03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_03690 PF03466 LysR substrate binding domain C2U47_03700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C2U47_03705 PF02811 PHP domain C2U47_03705 PF14579 Helix-hairpin-helix motif C2U47_03705 PF07733 Bacterial DNA polymerase III alpha NTPase domain C2U47_03705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C2U47_03705 PF01336 OB-fold nucleic acid binding domain C2U47_03710 PF01351 Ribonuclease HII C2U47_03715 PF02684 Lipid-A-disaccharide synthetase C2U47_03720 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C2U47_03720 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_03725 PF07977 FabA-like domain C2U47_03730 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C2U47_03730 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_03735 PF03938 Outer membrane protein (OmpH-like) C2U47_03740 PF07244 Surface antigen variable number repeat C2U47_03740 PF01103 Surface antigen C2U47_03745 PF17820 PDZ domain C2U47_03745 PF02163 Peptidase family M50 C2U47_03750 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C2U47_03750 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C2U47_03750 PF13288 DXP reductoisomerase C-terminal domain C2U47_03760 PF01255 Putative undecaprenyl diphosphate synthase C2U47_03765 PF01765 Ribosome recycling factor C2U47_03770 PF00696 Amino acid kinase family C2U47_03775 PF00889 Elongation factor TS C2U47_03780 PF00318 Ribosomal protein S2 C2U47_03785 PF00557 Metallopeptidase family M24 C2U47_03790 PF01842 ACT domain C2U47_03790 PF01909 Nucleotidyltransferase domain C2U47_03790 PF01966 HD domain C2U47_03790 PF08335 GlnD PII-uridylyltransferase C2U47_03795 PF14602 Hexapeptide repeat of succinyl-transferase C2U47_03795 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C2U47_03795 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_03800 PF11944 Protein of unknown function (DUF3461) C2U47_03805 PF02378 Phosphotransferase system, EIIC C2U47_03805 PF00367 phosphotransferase system, EIIB C2U47_03810 PF07148 Maltose operon periplasmic protein precursor (MalM) C2U47_03815 PF02264 LamB porin C2U47_03820 PF00258 Flavodoxin C2U47_03825 PF00849 RNA pseudouridylate synthase C2U47_03830 PF04287 tRNA pseudouridine synthase C C2U47_03855 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C2U47_03860 PF07348 Syd protein (SUKH-2) C2U47_03865 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C2U47_03865 PF14489 QueF-like protein C2U47_03875 PF00990 Diguanylate cyclase, GGDEF domain C2U47_03880 PF03641 Possible lysine decarboxylase C2U47_03880 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C2U47_03880 PF11892 Domain of unknown function (DUF3412) C2U47_03885 PF01367 5'-3' exonuclease, C-terminal SAM fold C2U47_03885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2U47_03890 PF18324 Hypothetical protein TT1725 C2U47_03890 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U47_03900 PF01728 FtsJ-like methyltransferase C2U47_03900 PF18125 RlmM ferredoxin-like domain C2U47_03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_03915 PF03466 LysR substrate binding domain C2U47_03920 PF00672 HAMP domain C2U47_03920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_03925 PF00817 impB/mucB/samB family C2U47_03925 PF11799 impB/mucB/samB family C-terminal domain C2U47_03925 PF11798 IMS family HHH motif C2U47_03940 PF02424 ApbE family C2U47_03945 PF00175 Oxidoreductase NAD-binding domain C2U47_03945 PF00970 Oxidoreductase FAD-binding domain C2U47_03945 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U47_03950 PF02508 Rnf-Nqr subunit, membrane protein C2U47_03955 PF02508 Rnf-Nqr subunit, membrane protein C2U47_03960 PF04205 FMN-binding domain C2U47_03965 PF03116 NQR2, RnfD, RnfE family C2U47_03970 PF11973 NQRA C-terminal domain C2U47_03970 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C2U47_03975 PF01722 BolA-like protein C2U47_03980 PF05175 Methyltransferase small domain C2U47_03990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2U47_04000 PF07690 Major Facilitator Superfamily C2U47_04005 PF03502 Nucleoside-specific channel-forming protein, Tsx C2U47_04010 PF04461 Protein of unknown function (DUF520) C2U47_04015 PF02558 Ketopantoate reductase PanE/ApbA C2U47_04015 PF08546 Ketopantoate reductase PanE/ApbA C terminal C2U47_04020 PF01965 DJ-1/PfpI family C2U47_04025 PF01740 STAS domain C2U47_04025 PF00916 Sulfate permease family C2U47_04030 PF00512 His Kinase A (phospho-acceptor) domain C2U47_04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_04030 PF00672 HAMP domain C2U47_04035 PF00486 Transcriptional regulatory protein, C terminal C2U47_04035 PF00072 Response regulator receiver domain C2U47_04040 PF00529 HlyD membrane-fusion protein of T1SS C2U47_04040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_04045 PF00873 AcrB/AcrD/AcrF family C2U47_04075 PF00356 Bacterial regulatory proteins, lacI family C2U47_04080 PF13416 Bacterial extracellular solute-binding protein C2U47_04085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_04085 PF00672 HAMP domain C2U47_04090 PF00933 Glycosyl hydrolase family 3 N terminal domain C2U47_04100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U47_04105 PF02378 Phosphotransferase system, EIIC C2U47_04105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U47_04110 PF00232 Glycosyl hydrolase family 1 C2U47_04115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C2U47_04120 PF00722 Glycosyl hydrolases family 16 C2U47_04135 PF16363 GDP-mannose 4,6 dehydratase C2U47_04140 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U47_04140 PF00970 Oxidoreductase FAD-binding domain C2U47_04140 PF00175 Oxidoreductase NAD-binding domain C2U47_04145 PF03063 Prismane/CO dehydrogenase family C2U47_04150 PF00210 Ferritin-like domain C2U47_04190 PF00106 short chain dehydrogenase C2U47_04200 PF00875 DNA photolyase C2U47_04200 PF03441 FAD binding domain of DNA photolyase C2U47_04205 PF13411 MerR HTH family regulatory protein C2U47_04210 PF08349 Protein of unknown function (DUF1722) C2U47_04235 PF00800 Prephenate dehydratase C2U47_04235 PF01817 Chorismate mutase type II C2U47_04260 PF03976 Polyphosphate kinase 2 (PPK2) C2U47_04265 PF07995 Glucose / Sorbosone dehydrogenase C2U47_04275 PF08220 DeoR-like helix-turn-helix domain C2U47_04275 PF00455 DeoR C terminal sensor domain C2U47_04280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C2U47_04280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C2U47_04285 PF17042 Nucleotide-binding C-terminal domain C2U47_04285 PF07005 Sugar-binding N-terminal domain C2U47_04290 PF00596 Class II Aldolase and Adducin N-terminal domain C2U47_04295 PF01261 Xylose isomerase-like TIM barrel C2U47_04300 PF01370 NAD dependent epimerase/dehydratase family C2U47_04305 PF02447 GntP family permease C2U47_04315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_04320 PF03573 outer membrane porin, OprD family C2U47_04325 PF00106 short chain dehydrogenase C2U47_04350 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C2U47_04355 PF06029 AlkA N-terminal domain C2U47_04355 PF02805 Metal binding domain of Ada C2U47_04355 PF12833 Helix-turn-helix domain C2U47_04355 PF00730 HhH-GPD superfamily base excision DNA repair protein C2U47_04360 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2U47_04360 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2U47_04370 PF06906 Protein of unknown function (DUF1272) C2U47_04380 PF01136 Peptidase family U32 C2U47_04380 PF12392 Collagenase C2U47_04385 PF01810 LysE type translocator C2U47_04390 PF03466 LysR substrate binding domain C2U47_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_04420 PF00563 EAL domain C2U47_04420 PF00989 PAS fold C2U47_04420 PF00990 Diguanylate cyclase, GGDEF domain C2U47_04420 PF01590 GAF domain C2U47_04430 PF01568 Molydopterin dinucleotide binding domain C2U47_04430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U47_04430 PF00384 Molybdopterin oxidoreductase C2U47_04435 PF03916 Polysulphide reductase, NrfD C2U47_04440 PF13247 4Fe-4S dicluster domain C2U47_04450 PF03743 Bacterial conjugation TrbI-like protein C2U47_04455 PF03524 Conjugal transfer protein C2U47_04480 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C2U47_04490 PF04956 TrbC/VIRB2 family C2U47_04495 PF00437 Type II/IV secretion system protein C2U47_04505 PF02534 Type IV secretory system Conjugative DNA transfer C2U47_04525 PF06250 YhcG PDDEXK nuclease domain C2U47_04525 PF17761 DUF1016 N-terminal domain C2U47_04530 PF04002 RadC-like JAB domain C2U47_04550 PF00893 Small Multidrug Resistance protein C2U47_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_04565 PF03466 LysR substrate binding domain C2U47_04570 PF02534 Type IV secretory system Conjugative DNA transfer C2U47_04580 PF00437 Type II/IV secretion system protein C2U47_04585 PF04956 TrbC/VIRB2 family C2U47_04595 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C2U47_04610 PF04610 TrbL/VirB6 plasmid conjugal transfer protein C2U47_04620 PF03524 Conjugal transfer protein C2U47_04625 PF03743 Bacterial conjugation TrbI-like protein C2U47_04645 PF00440 Bacterial regulatory proteins, tetR family C2U47_04650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_04655 PF00873 AcrB/AcrD/AcrF family C2U47_04670 PF02405 Permease MlaE C2U47_04675 PF00005 ABC transporter C2U47_04700 PF10502 Signal peptidase, peptidase S26 C2U47_04715 PF13614 AAA domain C2U47_04755 PF05284 Protein of unknown function (DUF736) C2U47_04775 PF06067 Domain of unknown function (DUF932) C2U47_04790 PF04002 RadC-like JAB domain C2U47_04795 PF06250 YhcG PDDEXK nuclease domain C2U47_04795 PF17761 DUF1016 N-terminal domain C2U47_04805 PF00989 PAS fold C2U47_04805 PF00512 His Kinase A (phospho-acceptor) domain C2U47_04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_04810 PF00196 Bacterial regulatory proteins, luxR family C2U47_04810 PF00072 Response regulator receiver domain C2U47_04815 PF03575 Peptidase family S51 C2U47_04820 PF07690 Major Facilitator Superfamily C2U47_04825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_04825 PF00529 HlyD membrane-fusion protein of T1SS C2U47_04835 PF00206 Lyase C2U47_04835 PF10415 Fumarase C C-terminus C2U47_04845 PF00171 Aldehyde dehydrogenase family C2U47_04845 PF01619 Proline dehydrogenase C2U47_04845 PF14850 DNA-binding domain of Proline dehydrogenase C2U47_04845 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C2U47_04850 PF01168 Alanine racemase, N-terminal domain C2U47_04850 PF00842 Alanine racemase, C-terminal domain C2U47_04855 PF00772 DnaB-like helicase N terminal domain C2U47_04855 PF03796 DnaB-like helicase C terminal domain C2U47_04865 PF02872 5'-nucleotidase, C-terminal domain C2U47_04865 PF00149 Calcineurin-like phosphoesterase C2U47_04885 PF00072 Response regulator receiver domain C2U47_04885 PF02954 Bacterial regulatory protein, Fis family C2U47_04885 PF00158 Sigma-54 interaction domain C2U47_04890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U47_04890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C2U47_04900 PF04102 SlyX C2U47_04905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U47_04910 PF09526 Probable metal-binding protein (DUF2387) C2U47_04920 PF00072 Response regulator receiver domain C2U47_04920 PF01584 CheW-like domain C2U47_04925 PF00561 alpha/beta hydrolase fold C2U47_04930 PF00990 Diguanylate cyclase, GGDEF domain C2U47_04930 PF00360 Phytochrome region C2U47_04930 PF01590 GAF domain C2U47_04930 PF00563 EAL domain C2U47_04935 PF06794 Uncharacterised protein family (UPF0270) C2U47_04940 PF00485 Phosphoribulokinase / Uridine kinase family C2U47_04955 PF02566 OsmC-like protein C2U47_04960 PF13545 Crp-like helix-turn-helix domain C2U47_04960 PF00027 Cyclic nucleotide-binding domain C2U47_04965 PF13847 Methyltransferase domain C2U47_04970 PF08329 Chitinase A, N-terminal domain C2U47_04970 PF00704 Glycosyl hydrolases family 18 C2U47_04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_04975 PF00989 PAS fold C2U47_04975 PF00512 His Kinase A (phospho-acceptor) domain C2U47_04980 PF12832 MFS_1 like family C2U47_04985 PF00593 TonB dependent receptor C2U47_04985 PF07715 TonB-dependent Receptor Plug Domain C2U47_05005 PF01243 Pyridoxamine 5'-phosphate oxidase C2U47_05010 PF06228 Haem utilisation ChuX/HutX C2U47_05020 PF01032 FecCD transport family C2U47_05025 PF00005 ABC transporter C2U47_05035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2U47_05035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2U47_05035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2U47_05040 PF01370 NAD dependent epimerase/dehydratase family C2U47_05045 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C2U47_05055 PF00535 Glycosyl transferase family 2 C2U47_05060 PF01464 Transglycosylase SLT domain C2U47_05060 PF10145 Phage-related minor tail protein C2U47_05060 PF01551 Peptidase family M23 C2U47_05065 PF00005 ABC transporter C2U47_05065 PF12848 ABC transporter C2U47_05075 PF00860 Permease family C2U47_05080 PF00226 DnaJ domain C2U47_05080 PF05099 Tellurite resistance protein TerB C2U47_05085 PF00483 Nucleotidyl transferase C2U47_05090 PF01636 Phosphotransferase enzyme family C2U47_05095 PF04453 LPS transport system D C2U47_05095 PF03968 OstA-like protein C2U47_05100 PF09312 SurA N-terminal domain C2U47_05100 PF00639 PPIC-type PPIASE domain C2U47_05105 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C2U47_05110 PF00398 Ribosomal RNA adenine dimethylase C2U47_05115 PF04379 ApaG domain C2U47_05120 PF00149 Calcineurin-like phosphoesterase C2U47_05130 PF00296 Luciferase-like monooxygenase C2U47_05145 PF01926 50S ribosome-binding GTPase C2U47_05145 PF01018 GTP1/OBG C2U47_05150 PF01016 Ribosomal L27 protein C2U47_05155 PF00829 Ribosomal prokaryotic L21 protein C2U47_05160 PF00348 Polyprenyl synthetase C2U47_05165 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C2U47_05170 PF01145 SPFH domain / Band 7 family C2U47_05175 PF01145 SPFH domain / Band 7 family C2U47_05175 PF12221 Bacterial membrane protein N terminal C2U47_05180 PF01926 50S ribosome-binding GTPase C2U47_05180 PF16360 GTP-binding GTPase Middle Region C2U47_05180 PF13167 GTP-binding GTPase N-terminal C2U47_05185 PF17209 Hfq protein C2U47_05195 PF01119 DNA mismatch repair protein, C-terminal domain C2U47_05195 PF08676 MutL C terminal dimerisation domain C2U47_05200 PF01520 N-acetylmuramoyl-L-alanine amidase C2U47_05205 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C2U47_05210 PF01256 Carbohydrate kinase C2U47_05210 PF03853 YjeF-related protein N-terminus C2U47_05215 PF08331 Domain of unknown function (DUF1730) C2U47_05220 PF00480 ROK family C2U47_05230 PF00005 ABC transporter C2U47_05230 PF09383 NIL domain C2U47_05235 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_05240 PF03180 NLPA lipoprotein C2U47_05245 PF02357 Transcription termination factor nusG C2U47_05250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_05250 PF08447 PAS fold C2U47_05250 PF13426 PAS domain C2U47_05255 PF03707 Bacterial signalling protein N terminal repeat C2U47_05255 PF00990 Diguanylate cyclase, GGDEF domain C2U47_05255 PF00563 EAL domain C2U47_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_05260 PF00512 His Kinase A (phospho-acceptor) domain C2U47_05260 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U47_05260 PF00072 Response regulator receiver domain C2U47_05275 PF00072 Response regulator receiver domain C2U47_05275 PF00989 PAS fold C2U47_05275 PF01627 Hpt domain C2U47_05275 PF18415 Histidine kinase receptor ArcB trans-membrane domain C2U47_05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_05275 PF00512 His Kinase A (phospho-acceptor) domain C2U47_05295 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C2U47_05300 PF03466 LysR substrate binding domain C2U47_05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_05310 PF01259 SAICAR synthetase C2U47_05315 PF06804 NlpB/DapX lipoprotein C2U47_05320 PF00701 Dihydrodipicolinate synthetase family C2U47_05325 PF01842 ACT domain C2U47_05330 PF00578 AhpC/TSA family C2U47_05335 PF03887 YfbU domain C2U47_05340 PF04217 Protein of unknown function, DUF412 C2U47_05345 PF00871 Acetokinase family C2U47_05350 PF01515 Phosphate acetyl/butaryl transferase C2U47_05350 PF07085 DRTGG domain C2U47_05355 PF10369 Small subunit of acetolactate synthase C2U47_05360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U47_05360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U47_05360 PF00205 Thiamine pyrophosphate enzyme, central domain C2U47_05375 PF01569 PAP2 superfamily C2U47_05385 PF00682 HMGL-like C2U47_05385 PF08502 LeuA allosteric (dimerisation) domain C2U47_05390 PF00180 Isocitrate/isopropylmalate dehydrogenase C2U47_05395 PF00330 Aconitase family (aconitate hydratase) C2U47_05400 PF00694 Aconitase C-terminal domain C2U47_05420 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_05425 PF00005 ABC transporter C2U47_05430 PF02562 PhoH-like protein C2U47_05430 PF13638 PIN domain C2U47_05440 PF00317 Ribonucleotide reductase, all-alpha domain C2U47_05440 PF02867 Ribonucleotide reductase, barrel domain C2U47_05440 PF08343 Ribonucleotide reductase N-terminal C2U47_05470 PF01521 Iron-sulphur cluster biosynthesis C2U47_05480 PF00654 Voltage gated chloride channel C2U47_05485 PF00202 Aminotransferase class-III C2U47_05500 PF01569 PAP2 superfamily C2U47_05510 PF03466 LysR substrate binding domain C2U47_05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_05515 PF00893 Small Multidrug Resistance protein C2U47_05520 PF00893 Small Multidrug Resistance protein C2U47_05525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U47_05530 PF00905 Penicillin binding protein transpeptidase domain C2U47_05530 PF14814 Bifunctional transglycosylase second domain C2U47_05530 PF00912 Transglycosylase C2U47_05535 PF04408 Helicase associated domain (HA2) C2U47_05535 PF00271 Helicase conserved C-terminal domain C2U47_05535 PF08482 ATP-dependent helicase C-terminal C2U47_05535 PF00270 DEAD/DEAH box helicase C2U47_05545 PF03749 Sugar fermentation stimulation protein RE domain C2U47_05545 PF17746 SfsA N-terminal OB domain C2U47_05550 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2U47_05555 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U47_05560 PF01743 Poly A polymerase head domain C2U47_05560 PF12627 Probable RNA and SrmB- binding site of polymerase A C2U47_05560 PF12626 Polymerase A arginine-rich C-terminus C2U47_05565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2U47_05570 PF02548 Ketopantoate hydroxymethyltransferase C2U47_05575 PF02569 Pantoate-beta-alanine ligase C2U47_05585 PF01061 ABC-2 type transporter C2U47_05590 PF00005 ABC transporter C2U47_05595 PF00156 Phosphoribosyl transferase domain C2U47_05600 PF00440 Bacterial regulatory proteins, tetR family C2U47_05605 PF02441 Flavoprotein C2U47_05610 PF02875 Mur ligase family, glutamate ligase domain C2U47_05610 PF08245 Mur ligase middle domain C2U47_05610 PF01225 Mur ligase family, catalytic domain C2U47_05615 PF00719 Inorganic pyrophosphatase C2U47_05630 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C2U47_05645 PF00005 ABC transporter C2U47_05665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_05665 PF00672 HAMP domain C2U47_05665 PF12729 Four helix bundle sensory module for signal transduction C2U47_05685 PF00270 DEAD/DEAH box helicase C2U47_05685 PF17191 RecG wedge domain C2U47_05685 PF13749 Putative ATP-dependent DNA helicase recG C-terminal C2U47_05700 PF02080 TrkA-C domain C2U47_05700 PF03600 Citrate transporter C2U47_05705 PF00009 Elongation factor Tu GTP binding domain C2U47_05710 PF01507 Phosphoadenosine phosphosulfate reductase family C2U47_05720 PF01145 SPFH domain / Band 7 family C2U47_05720 PF16200 C-terminal region of band_7 C2U47_05725 PF01957 NfeD-like C-terminal, partner-binding C2U47_05735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2U47_05735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U47_05740 PF07690 Major Facilitator Superfamily C2U47_05745 PF01725 Ham1 family C2U47_05750 PF06969 HemN C-terminal domain C2U47_05750 PF04055 Radical SAM superfamily C2U47_05755 PF03889 Alternative ribosome-rescue factor A C2U47_05765 PF13411 MerR HTH family regulatory protein C2U47_05770 PF01808 AICARFT/IMPCHase bienzyme C2U47_05770 PF02142 MGS-like domain C2U47_05775 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C2U47_05775 PF02843 Phosphoribosylglycinamide synthetase, C domain C2U47_05775 PF02844 Phosphoribosylglycinamide synthetase, N domain C2U47_05805 PF04545 Sigma-70, region 4 C2U47_05805 PF03979 Sigma-70 factor, region 1.1 C2U47_05805 PF04546 Sigma-70, non-essential region C2U47_05805 PF04539 Sigma-70 region 3 C2U47_05805 PF00140 Sigma-70 factor, region 1.2 C2U47_05805 PF04542 Sigma-70 region 2 C2U47_05810 PF08275 DNA primase catalytic core, N-terminal domain C2U47_05810 PF08278 DNA primase DnaG DnaB-binding C2U47_05810 PF10410 DnaB-helicase binding domain of primase C2U47_05810 PF01807 CHC2 zinc finger C2U47_05815 PF09424 Yqey-like protein C2U47_05820 PF01165 Ribosomal protein S21 C2U47_05825 PF00814 Glycoprotease family C2U47_05830 PF00140 Sigma-70 factor, region 1.2 C2U47_05830 PF04539 Sigma-70 region 3 C2U47_05830 PF04542 Sigma-70 region 2 C2U47_05830 PF04545 Sigma-70, region 4 C2U47_05835 PF01476 LysM domain C2U47_05835 PF01551 Peptidase family M23 C2U47_05840 PF09335 SNARE associated Golgi protein C2U47_05850 PF01975 Survival protein SurE C2U47_05855 PF01142 tRNA pseudouridine synthase D (TruD) C2U47_05860 PF02542 YgbB family C2U47_05865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C2U47_05870 PF04977 Septum formation initiator C2U47_05875 PF00113 Enolase, C-terminal TIM barrel domain C2U47_05875 PF03952 Enolase, N-terminal domain C2U47_05880 PF06418 CTP synthase N-terminus C2U47_05880 PF00117 Glutamine amidotransferase class-I C2U47_05885 PF03819 MazG nucleotide pyrophosphohydrolase domain C2U47_05890 PF13291 ACT domain C2U47_05890 PF02824 TGS domain C2U47_05890 PF04607 Region found in RelA / SpoT proteins C2U47_05895 PF01938 TRAM domain C2U47_05895 PF05958 tRNA (Uracil-5-)-methyltransferase C2U47_05900 PF00672 HAMP domain C2U47_05900 PF00512 His Kinase A (phospho-acceptor) domain C2U47_05900 PF01627 Hpt domain C2U47_05900 PF00072 Response regulator receiver domain C2U47_05900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U47_05900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_05905 PF07308 Protein of unknown function (DUF1456) C2U47_05910 PF01510 N-acetylmuramoyl-L-alanine amidase C2U47_05915 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C2U47_05920 PF11967 Recombination protein O N terminal C2U47_05920 PF02565 Recombination protein O C terminal C2U47_05925 PF07650 KH domain C2U47_05925 PF01926 50S ribosome-binding GTPase C2U47_05930 PF14622 Ribonuclease-III-like C2U47_05930 PF00035 Double-stranded RNA binding motif C2U47_05935 PF10502 Signal peptidase, peptidase S26 C2U47_05940 PF00009 Elongation factor Tu GTP binding domain C2U47_05940 PF03144 Elongation factor Tu domain 2 C2U47_05940 PF00679 Elongation factor G C-terminus C2U47_05940 PF06421 GTP-binding protein LepA C-terminus C2U47_05950 PF03888 MucB/RseB N-terminal domain C2U47_05950 PF17188 MucB/RseB C-terminal domain C2U47_05955 PF03873 Anti sigma-E protein RseA, C-terminal domain C2U47_05955 PF03872 Anti sigma-E protein RseA, N-terminal domain C2U47_05960 PF04542 Sigma-70 region 2 C2U47_05960 PF08281 Sigma-70, region 4 C2U47_05965 PF00890 FAD binding domain C2U47_05965 PF02910 Fumarate reductase flavoprotein C-term C2U47_05975 PF03937 Flavinator of succinate dehydrogenase C2U47_05980 PF01571 Aminomethyltransferase folate-binding domain C2U47_05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_05985 PF03466 LysR substrate binding domain C2U47_06000 PF03091 CutA1 divalent ion tolerance protein C2U47_06005 PF02683 Cytochrome C biogenesis protein transmembrane region C2U47_06005 PF11412 Disulphide bond corrector protein DsbC C2U47_06015 PF01266 FAD dependent oxidoreductase C2U47_06020 PF01116 Fructose-bisphosphate aldolase class-II C2U47_06025 PF00162 Phosphoglycerate kinase C2U47_06030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U47_06030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U47_06035 PF00480 ROK family C2U47_06040 PF01208 Uroporphyrinogen decarboxylase (URO-D) C2U47_06045 PF09297 NADH pyrophosphatase zinc ribbon domain C2U47_06045 PF00293 NUDIX domain C2U47_06055 PF00027 Cyclic nucleotide-binding domain C2U47_06055 PF00520 Ion transport protein C2U47_06060 PF02743 Cache domain C2U47_06060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_06060 PF00672 HAMP domain C2U47_06070 PF03710 Glutamate-ammonia ligase adenylyltransferase C2U47_06070 PF08335 GlnD PII-uridylyltransferase C2U47_06090 PF00326 Prolyl oligopeptidase family C2U47_06090 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2U47_06095 PF00291 Pyridoxal-phosphate dependent enzyme C2U47_06100 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_06105 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_06110 PF00005 ABC transporter C2U47_06115 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_06120 PF13194 Domain of unknown function (DUF4010) C2U47_06125 PF12464 Maltose acetyltransferase C2U47_06125 PF14602 Hexapeptide repeat of succinyl-transferase C2U47_06155 PF14552 Tautomerase enzyme C2U47_06165 PF03466 LysR substrate binding domain C2U47_06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_06170 PF00206 Lyase C2U47_06170 PF14698 Argininosuccinate lyase C-terminal C2U47_06175 PF00764 Arginosuccinate synthase C2U47_06180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U47_06180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U47_06185 PF00696 Amino acid kinase family C2U47_06190 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U47_06190 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U47_06195 PF07687 Peptidase dimerisation domain C2U47_06195 PF01546 Peptidase family M20/M25/M40 C2U47_06200 PF00311 Phosphoenolpyruvate carboxylase C2U47_06205 PF00563 EAL domain C2U47_06205 PF00990 Diguanylate cyclase, GGDEF domain C2U47_06205 PF05231 MASE1 C2U47_06205 PF13426 PAS domain C2U47_06205 PF08448 PAS fold C2U47_06205 PF08447 PAS fold C2U47_06210 PF04073 Aminoacyl-tRNA editing domain C2U47_06230 PF00155 Aminotransferase class I and II C2U47_06230 PF00392 Bacterial regulatory proteins, gntR family C2U47_06245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_06245 PF03466 LysR substrate binding domain C2U47_06250 PF03788 LrgA family C2U47_06255 PF04172 LrgB-like family C2U47_06260 PF03447 Homoserine dehydrogenase, NAD binding domain C2U47_06260 PF00742 Homoserine dehydrogenase C2U47_06260 PF00696 Amino acid kinase family C2U47_06265 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U47_06270 PF01340 Met Apo-repressor, MetJ C2U47_06280 PF01588 Putative tRNA binding domain C2U47_06285 PF03222 Tryptophan/tyrosine permease family C2U47_06290 PF00459 Inositol monophosphatase family C2U47_06295 PF00293 NUDIX domain C2U47_06300 PF13419 Haloacid dehalogenase-like hydrolase C2U47_06305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U47_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_06310 PF03466 LysR substrate binding domain C2U47_06315 PF01479 S4 domain C2U47_06315 PF00579 tRNA synthetases class I (W and Y) C2U47_06320 PF00196 Bacterial regulatory proteins, luxR family C2U47_06325 PF01203 Type II secretion system (T2SS), protein N C2U47_06330 PF04612 Type II secretion system (T2SS), protein M C2U47_06335 PF05134 Type II secretion system (T2SS), protein L C2U47_06335 PF12693 GspL periplasmic domain C2U47_06340 PF03934 Type II secretion system (T2SS), protein K C2U47_06350 PF11612 Type II secretion system (T2SS), protein J C2U47_06350 PF07963 Prokaryotic N-terminal methylation motif C2U47_06355 PF02501 Type II secretion system (T2SS), protein I C2U47_06355 PF07963 Prokaryotic N-terminal methylation motif C2U47_06360 PF12019 Type II transport protein GspH C2U47_06360 PF07963 Prokaryotic N-terminal methylation motif C2U47_06365 PF07963 Prokaryotic N-terminal methylation motif C2U47_06365 PF08334 Type II secretion system (T2SS), protein G C2U47_06370 PF00482 Type II secretion system (T2SS), protein F C2U47_06375 PF00437 Type II/IV secretion system protein C2U47_06380 PF03958 Bacterial type II/III secretion system short domain C2U47_06380 PF00263 Bacterial type II and III secretion system protein C2U47_06385 PF11356 Type II secretion system protein C C2U47_06390 PF01479 S4 domain C2U47_06395 PF01430 Hsp33 protein C2U47_06400 PF01293 Phosphoenolpyruvate carboxykinase C2U47_06405 PF00392 Bacterial regulatory proteins, gntR family C2U47_06410 PF01321 Creatinase/Prolidase N-terminal domain C2U47_06410 PF00557 Metallopeptidase family M24 C2U47_06415 PF00583 Acetyltransferase (GNAT) family C2U47_06420 PF05433 Glycine zipper 2TM domain C2U47_06425 PF01928 CYTH domain C2U47_06430 PF01865 Protein of unknown function DUF47 C2U47_06435 PF01384 Phosphate transporter family C2U47_06440 PF01966 HD domain C2U47_06440 PF01743 Poly A polymerase head domain C2U47_06440 PF12627 Probable RNA and SrmB- binding site of polymerase A C2U47_06445 PF01471 Putative peptidoglycan binding domain C2U47_06445 PF13401 AAA domain C2U47_06455 PF14815 NUDIX domain C2U47_06455 PF00633 Helix-hairpin-helix motif C2U47_06455 PF10576 Iron-sulfur binding domain of endonuclease III C2U47_06455 PF00730 HhH-GPD superfamily base excision DNA repair protein C2U47_06460 PF04362 Bacterial Fe(2+) trafficking C2U47_06465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C2U47_06465 PF01464 Transglycosylase SLT domain C2U47_06475 PF00657 GDSL-like Lipase/Acylhydrolase C2U47_06480 PF00691 OmpA family C2U47_06480 PF01389 OmpA-like transmembrane domain C2U47_06485 PF03886 ABC-type transport auxiliary lipoprotein component C2U47_06490 PF02470 MlaD protein C2U47_06495 PF04403 Paraquat-inducible protein A C2U47_06500 PF17209 Hfq protein C2U47_06505 PF13419 Haloacid dehalogenase-like hydrolase C2U47_06515 PF00701 Dihydrodipicolinate synthetase family C2U47_06520 PF05175 Methyltransferase small domain C2U47_06520 PF08468 Methyltransferase small domain N-terminal C2U47_06530 PF08323 Starch synthase catalytic domain C2U47_06530 PF00534 Glycosyl transferases group 1 C2U47_06570 PF03553 Na+/H+ antiporter family C2U47_06580 PF13416 Bacterial extracellular solute-binding protein C2U47_06585 PF08402 TOBE domain C2U47_06585 PF00005 ABC transporter C2U47_06590 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_06595 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_06600 PF00171 Aldehyde dehydrogenase family C2U47_06605 PF01040 UbiA prenyltransferase family C2U47_06630 PF00510 Cytochrome c oxidase subunit III C2U47_06635 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C2U47_06645 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C2U47_06645 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C2U47_06650 PF08351 Domain of unknown function (DUF1726) C2U47_06650 PF17176 tRNA-binding domain C2U47_06650 PF05127 Helicase C2U47_06650 PF13718 GNAT acetyltransferase 2 C2U47_06665 PF00210 Ferritin-like domain C2U47_06670 PF02142 MGS-like domain C2U47_06700 PF00356 Bacterial regulatory proteins, lacI family C2U47_06705 PF00367 phosphotransferase system, EIIB C2U47_06705 PF02378 Phosphotransferase system, EIIC C2U47_06710 PF11941 Domain of unknown function (DUF3459) C2U47_06710 PF00128 Alpha amylase, catalytic domain C2U47_06715 PF12464 Maltose acetyltransferase C2U47_06715 PF14602 Hexapeptide repeat of succinyl-transferase C2U47_06720 PF01037 Lrp/AsnC ligand binding domain C2U47_06750 PF04222 Protein of unknown function (DUF416) C2U47_06755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U47_06760 PF08525 Opacity-associated protein A N-terminal motif C2U47_06760 PF01551 Peptidase family M23 C2U47_06760 PF01476 LysM domain C2U47_06780 PF01297 Zinc-uptake complex component A periplasmic C2U47_06785 PF00005 ABC transporter C2U47_06790 PF00950 ABC 3 transport family C2U47_06795 PF03466 LysR substrate binding domain C2U47_06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_06805 PF03167 Uracil DNA glycosylase superfamily C2U47_06810 PF00892 EamA-like transporter family C2U47_06815 PF01541 GIY-YIG catalytic domain C2U47_06830 PF04012 PspA/IM30 family C2U47_06835 PF01553 Acyltransferase C2U47_06855 PF00578 AhpC/TSA family C2U47_06865 PF00684 DnaJ central domain C2U47_06865 PF00226 DnaJ domain C2U47_06865 PF01556 DnaJ C terminal domain C2U47_06915 PF13358 DDE superfamily endonuclease C2U47_06915 PF13592 Winged helix-turn helix C2U47_06920 PF02384 N-6 DNA Methylase C2U47_06930 PF01609 Transposase DDE domain C2U47_06930 PF05598 Transposase domain (DUF772) C2U47_06945 PF13358 DDE superfamily endonuclease C2U47_06945 PF13592 Winged helix-turn helix C2U47_06980 PF13592 Winged helix-turn helix C2U47_06980 PF13358 DDE superfamily endonuclease C2U47_06990 PF08401 Domain of unknown function (DUF1738) C2U47_06990 PF13362 Toprim domain C2U47_06990 PF18818 Metallopeptidase superfamily domain C2U47_07020 PF02796 Helix-turn-helix domain of resolvase C2U47_07020 PF00239 Resolvase, N terminal domain C2U47_07025 PF05052 MerE protein C2U47_07030 PF13411 MerR HTH family regulatory protein C2U47_07035 PF00403 Heavy-metal-associated domain C2U47_07035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U47_07035 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_07045 PF00403 Heavy-metal-associated domain C2U47_07050 PF02411 MerT mercuric transport protein C2U47_07055 PF00376 MerR family regulatory protein C2U47_07055 PF09278 MerR, DNA binding C2U47_07070 PF00809 Pterin binding enzyme C2U47_07075 PF00893 Small Multidrug Resistance protein C2U47_07080 PF13427 Domain of unknown function (DUF4111) C2U47_07080 PF01909 Nucleotidyltransferase domain C2U47_07085 PF00589 Phage integrase family C2U47_07085 PF13495 Phage integrase, N-terminal SAM-like domain C2U47_07105 PF00589 Phage integrase family C2U47_07105 PF02899 Phage integrase, N-terminal SAM-like domain C2U47_07120 PF03739 Lipopolysaccharide export system permease LptF/LptG C2U47_07125 PF03739 Lipopolysaccharide export system permease LptF/LptG C2U47_07130 PF02789 Cytosol aminopeptidase family, N-terminal domain C2U47_07130 PF00883 Cytosol aminopeptidase family, catalytic domain C2U47_07135 PF04364 DNA polymerase III chi subunit, HolC C2U47_07140 PF08264 Anticodon-binding domain of tRNA C2U47_07140 PF00133 tRNA synthetases class I (I, L, M and V) C2U47_07140 PF10458 Valyl tRNA synthetase tRNA binding arm C2U47_07145 PF03471 Transporter associated domain C2U47_07145 PF00571 CBS domain C2U47_07145 PF01595 Cyclin M transmembrane N-terminal domain C2U47_07150 PF09335 SNARE associated Golgi protein C2U47_07155 PF00768 D-alanyl-D-alanine carboxypeptidase C2U47_07190 PF02599 Global regulator protein family C2U47_07195 PF01842 ACT domain C2U47_07195 PF13840 ACT domain C2U47_07195 PF00696 Amino acid kinase family C2U47_07200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2U47_07200 PF01411 tRNA synthetases class II (A) C2U47_07200 PF02272 DHHA1 domain C2U47_07205 PF02631 RecX family C2U47_07210 PF00154 recA bacterial DNA recombination protein C2U47_07215 PF02464 Competence-damaged protein C2U47_07225 PF01624 MutS domain I C2U47_07225 PF05190 MutS family domain IV C2U47_07225 PF00488 MutS domain V C2U47_07225 PF05188 MutS domain II C2U47_07225 PF05192 MutS domain III C2U47_07230 PF02028 BCCT, betaine/carnitine/choline family transporter C2U47_07270 PF02660 Glycerol-3-phosphate acyltransferase C2U47_07275 PF02152 Dihydroneopterin aldolase C2U47_07280 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2U47_07295 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2U47_07295 PF07683 Cobalamin synthesis protein cobW C-terminal domain C2U47_07300 PF04030 D-arabinono-1,4-lactone oxidase C2U47_07300 PF01565 FAD binding domain C2U47_07305 PF01810 LysE type translocator C2U47_07310 PF03466 LysR substrate binding domain C2U47_07310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_07315 PF00563 EAL domain C2U47_07315 PF12792 CSS motif domain associated with EAL C2U47_07320 PF11791 Aconitate B N-terminal domain C2U47_07320 PF06434 Aconitate hydratase 2 N-terminus C2U47_07320 PF00330 Aconitase family (aconitate hydratase) C2U47_07325 PF01734 Patatin-like phospholipase C2U47_07330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_07330 PF00672 HAMP domain C2U47_07330 PF12729 Four helix bundle sensory module for signal transduction C2U47_07335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_07335 PF12729 Four helix bundle sensory module for signal transduction C2U47_07335 PF00672 HAMP domain C2U47_07345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U47_07345 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_07350 PF00364 Biotin-requiring enzyme C2U47_07350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U47_07350 PF02817 e3 binding domain C2U47_07355 PF17831 Pyruvate dehydrogenase E1 component middle domain C2U47_07355 PF00456 Transketolase, thiamine diphosphate binding domain C2U47_07360 PF00392 Bacterial regulatory proteins, gntR family C2U47_07360 PF07729 FCD domain C2U47_07370 PF01510 N-acetylmuramoyl-L-alanine amidase C2U47_07380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C2U47_07380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C2U47_07390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C2U47_07390 PF00437 Type II/IV secretion system protein C2U47_07395 PF00482 Type II secretion system (T2SS), protein F C2U47_07400 PF01478 Type IV leader peptidase family C2U47_07400 PF06750 Bacterial Peptidase A24 N-terminal domain C2U47_07405 PF01121 Dephospho-CoA kinase C2U47_07410 PF07072 Cell division protein C2U47_07415 PF03884 DNA gyrase inhibitor YacG C2U47_07420 PF00293 NUDIX domain C2U47_07430 PF07516 SecA Wing and Scaffold domain C2U47_07430 PF01043 SecA preprotein cross-linking domain C2U47_07430 PF07517 SecA DEAD-like domain C2U47_07430 PF02810 SEC-C motif C2U47_07440 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C2U47_07445 PF00091 Tubulin/FtsZ family, GTPase domain C2U47_07445 PF12327 FtsZ family, C-terminal domain C2U47_07450 PF02491 SHS2 domain inserted in FTSA C2U47_07455 PF03799 Cell division protein FtsQ C2U47_07455 PF08478 POTRA domain, FtsQ-type C2U47_07460 PF01225 Mur ligase family, catalytic domain C2U47_07460 PF02875 Mur ligase family, glutamate ligase domain C2U47_07460 PF08245 Mur ligase middle domain C2U47_07465 PF03033 Glycosyltransferase family 28 N-terminal domain C2U47_07465 PF04101 Glycosyltransferase family 28 C-terminal domain C2U47_07470 PF01098 Cell cycle protein C2U47_07475 PF02875 Mur ligase family, glutamate ligase domain C2U47_07475 PF08245 Mur ligase middle domain C2U47_07485 PF08245 Mur ligase middle domain C2U47_07485 PF02875 Mur ligase family, glutamate ligase domain C2U47_07485 PF01225 Mur ligase family, catalytic domain C2U47_07490 PF08245 Mur ligase middle domain C2U47_07490 PF02875 Mur ligase family, glutamate ligase domain C2U47_07490 PF01225 Mur ligase family, catalytic domain C2U47_07495 PF00905 Penicillin binding protein transpeptidase domain C2U47_07495 PF03717 Penicillin-binding Protein dimerisation domain C2U47_07500 PF04999 Cell division protein FtsL C2U47_07505 PF01795 MraW methylase family C2U47_07510 PF02381 MraZ protein, putative antitoxin-like C2U47_07520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U47_07525 PF04348 LppC putative lipoprotein C2U47_07530 PF02021 Uncharacterised protein family UPF0102 C2U47_07535 PF13580 SIS domain C2U47_07540 PF04972 BON domain C2U47_07545 PF04386 Stringent starvation protein B C2U47_07550 PF00043 Glutathione S-transferase, C-terminal domain C2U47_07550 PF02798 Glutathione S-transferase, N-terminal domain C2U47_07555 PF02167 Cytochrome C1 family C2U47_07560 PF00033 Cytochrome b/b6/petB C2U47_07560 PF00032 Cytochrome b(C-terminal)/b6/petD C2U47_07565 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C2U47_07565 PF00355 Rieske [2Fe-2S] domain C2U47_07570 PF00380 Ribosomal protein S9/S16 C2U47_07575 PF00572 Ribosomal protein L13 C2U47_07580 PF03969 AFG1-like ATPase C2U47_07590 PF13180 PDZ domain C2U47_07590 PF00595 PDZ domain C2U47_07595 PF13180 PDZ domain C2U47_07625 PF01979 Amidohydrolase family C2U47_07630 PF03841 L-seryl-tRNA selenium transferase C2U47_07635 PF07071 KDGP aldolase C2U47_07645 PF00381 PTS HPr component phosphorylation site C2U47_07650 PF03668 P-loop ATPase protein family C2U47_07655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U47_07660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C2U47_07665 PF04963 Sigma-54 factor, core binding domain C2U47_07665 PF00309 Sigma-54 factor, Activator interacting domain (AID) C2U47_07665 PF04552 Sigma-54, DNA binding domain C2U47_07670 PF00005 ABC transporter C2U47_07670 PF12399 Branched-chain amino acid ATP-binding cassette transporter C2U47_07675 PF03968 OstA-like protein C2U47_07690 PF00571 CBS domain C2U47_07690 PF01380 SIS domain C2U47_07695 PF00005 ABC transporter C2U47_07700 PF02405 Permease MlaE C2U47_07705 PF02470 MlaD protein C2U47_07710 PF05494 MlaC protein C2U47_07720 PF01722 BolA-like protein C2U47_07725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2U47_07730 PF03692 Putative zinc- or iron-chelating domain C2U47_07735 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C2U47_07745 PF08241 Methyltransferase domain C2U47_07755 PF07715 TonB-dependent Receptor Plug Domain C2U47_07755 PF00593 TonB dependent receptor C2U47_07770 PF01638 HxlR-like helix-turn-helix C2U47_07775 PF08803 Putative mono-oxygenase ydhR C2U47_07790 PF06055 Exopolysaccharide synthesis, ExoD C2U47_07795 PF00990 Diguanylate cyclase, GGDEF domain C2U47_07805 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_07820 PF13358 DDE superfamily endonuclease C2U47_07820 PF13592 Winged helix-turn helix C2U47_07830 PF06968 Biotin and Thiamin Synthesis associated domain C2U47_07830 PF04055 Radical SAM superfamily C2U47_07835 PF05690 Thiazole biosynthesis protein ThiG C2U47_07845 PF00899 ThiF family C2U47_07850 PF02581 Thiamine monophosphate synthase C2U47_07855 PF13667 ThiC-associated domain C2U47_07855 PF01964 Radical SAM ThiC family C2U47_07870 PF00486 Transcriptional regulatory protein, C terminal C2U47_07870 PF00072 Response regulator receiver domain C2U47_07880 PF08443 RimK-like ATP-grasp domain C2U47_07880 PF18030 RimK PreATP-grasp domain C2U47_07890 PF02574 Homocysteine S-methyltransferase C2U47_07890 PF02310 B12 binding domain C2U47_07890 PF00809 Pterin binding enzyme C2U47_07890 PF02607 B12 binding domain C2U47_07890 PF02965 Vitamin B12 dependent methionine synthase, activation domain C2U47_07895 PF00999 Sodium/hydrogen exchanger family C2U47_07915 PF04228 Putative neutral zinc metallopeptidase C2U47_07925 PF07690 Major Facilitator Superfamily C2U47_07930 PF01914 MarC family integral membrane protein C2U47_07940 PF01523 Putative modulator of DNA gyrase C2U47_07945 PF00795 Carbon-nitrogen hydrolase C2U47_07950 PF13116 Protein of unknown function C2U47_07950 PF13502 AsmA-like C-terminal region C2U47_07955 PF10150 Ribonuclease E/G family C2U47_07955 PF00575 S1 RNA binding domain C2U47_07960 PF02545 Maf-like protein C2U47_07965 PF04093 rod shape-determining protein MreD C2U47_07970 PF04085 rod shape-determining protein MreC C2U47_08000 PF07963 Prokaryotic N-terminal methylation motif C2U47_08000 PF00114 Pilin (bacterial filament) C2U47_08005 PF07963 Prokaryotic N-terminal methylation motif C2U47_08005 PF08334 Type II secretion system (T2SS), protein G C2U47_08020 PF00482 Type II secretion system (T2SS), protein F C2U47_08025 PF00437 Type II/IV secretion system protein C2U47_08040 PF03958 Bacterial type II/III secretion system short domain C2U47_08040 PF00263 Bacterial type II and III secretion system protein C2U47_08075 PF12792 CSS motif domain associated with EAL C2U47_08075 PF00563 EAL domain C2U47_08080 PF01699 Sodium/calcium exchanger protein C2U47_08085 PF00221 Aromatic amino acid lyase C2U47_08090 PF01175 Urocanase Rossmann-like domain C2U47_08090 PF17392 Urocanase C-terminal domain C2U47_08090 PF17391 Urocanase N-terminal domain C2U47_08095 PF00491 Arginase family C2U47_08100 PF01979 Amidohydrolase family C2U47_08105 PF00392 Bacterial regulatory proteins, gntR family C2U47_08105 PF07702 UTRA domain C2U47_08110 PF00484 Carbonic anhydrase C2U47_08115 PF04542 Sigma-70 region 2 C2U47_08115 PF04545 Sigma-70, region 4 C2U47_08115 PF00140 Sigma-70 factor, region 1.2 C2U47_08120 PF18075 FtsX extracellular domain C2U47_08125 PF00005 ABC transporter C2U47_08130 PF00448 SRP54-type protein, GTPase domain C2U47_08130 PF02881 SRP54-type protein, helical bundle domain C2U47_08145 PF07226 Protein of unknown function (DUF1422) C2U47_08150 PF00440 Bacterial regulatory proteins, tetR family C2U47_08160 PF13091 PLD-like domain C2U47_08165 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_08165 PF01464 Transglycosylase SLT domain C2U47_08175 PF02416 mttA/Hcf106 family C2U47_08180 PF03466 LysR substrate binding domain C2U47_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_08185 PF01914 MarC family integral membrane protein C2U47_08190 PF10678 Protein of unknown function (DUF2492) C2U47_08195 PF00375 Sodium:dicarboxylate symporter family C2U47_08205 PF03466 LysR substrate binding domain C2U47_08205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_08210 PF13533 Biotin-lipoyl like C2U47_08215 PF07690 Major Facilitator Superfamily C2U47_08220 PF07947 YhhN family C2U47_08235 PF16868 NMT1-like family C2U47_08255 PF00106 short chain dehydrogenase C2U47_08260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_08260 PF03466 LysR substrate binding domain C2U47_08265 PF02525 Flavodoxin-like fold C2U47_08270 PF02254 TrkA-N domain C2U47_08270 PF00999 Sodium/hydrogen exchanger family C2U47_08335 PF01196 Ribosomal protein L17 C2U47_08340 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C2U47_08340 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C2U47_08340 PF01000 RNA polymerase Rpb3/RpoA insert domain C2U47_08345 PF01479 S4 domain C2U47_08345 PF00163 Ribosomal protein S4/S9 N-terminal domain C2U47_08350 PF00411 Ribosomal protein S11 C2U47_08355 PF00416 Ribosomal protein S13/S18 C2U47_08360 PF00444 Ribosomal protein L36 C2U47_08365 PF00344 SecY translocase C2U47_08370 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C2U47_08375 PF00327 Ribosomal protein L30p/L7e C2U47_08380 PF03719 Ribosomal protein S5, C-terminal domain C2U47_08380 PF00333 Ribosomal protein S5, N-terminal domain C2U47_08385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C2U47_08390 PF00347 Ribosomal protein L6 C2U47_08395 PF00410 Ribosomal protein S8 C2U47_08400 PF00253 Ribosomal protein S14p/S29e C2U47_08405 PF00281 Ribosomal protein L5 C2U47_08405 PF00673 ribosomal L5P family C-terminus C2U47_08410 PF00467 KOW motif C2U47_08410 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C2U47_08415 PF00238 Ribosomal protein L14p/L23e C2U47_08420 PF00366 Ribosomal protein S17 C2U47_08425 PF00831 Ribosomal L29 protein C2U47_08430 PF00252 Ribosomal protein L16p/L10e C2U47_08435 PF07650 KH domain C2U47_08435 PF00189 Ribosomal protein S3, C-terminal domain C2U47_08440 PF00237 Ribosomal protein L22p/L17e C2U47_08445 PF00203 Ribosomal protein S19 C2U47_08450 PF00181 Ribosomal Proteins L2, RNA binding domain C2U47_08450 PF03947 Ribosomal Proteins L2, C-terminal domain C2U47_08455 PF00276 Ribosomal protein L23 C2U47_08460 PF00573 Ribosomal protein L4/L1 family C2U47_08465 PF00297 Ribosomal protein L3 C2U47_08470 PF00338 Ribosomal protein S10p/S20e C2U47_08480 PF00672 HAMP domain C2U47_08480 PF00512 His Kinase A (phospho-acceptor) domain C2U47_08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_08485 PF00486 Transcriptional regulatory protein, C terminal C2U47_08485 PF00072 Response regulator receiver domain C2U47_08495 PF09371 Tex-like protein N-terminal domain C2U47_08495 PF16921 Tex protein YqgF-like domain C2U47_08495 PF00575 S1 RNA binding domain C2U47_08495 PF17674 HHH domain C2U47_08510 PF00561 alpha/beta hydrolase fold C2U47_08515 PF00156 Phosphoribosyl transferase domain C2U47_08520 PF01521 Iron-sulphur cluster biosynthesis C2U47_08520 PF01106 NifU-like domain C2U47_08525 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C2U47_08525 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C2U47_08530 PF02556 Preprotein translocase subunit SecB C2U47_08535 PF00581 Rhodanese-like domain C2U47_08540 PF01676 Metalloenzyme superfamily C2U47_08540 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C2U47_08545 PF01551 Peptidase family M23 C2U47_08555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U47_08555 PF00356 Bacterial regulatory proteins, lacI family C2U47_08570 PF01081 KDPG and KHG aldolase C2U47_08575 PF00920 Dehydratase family C2U47_08580 PF01202 Shikimate kinase C2U47_08585 PF02447 GntP family permease C2U47_08590 PF13091 PLD-like domain C2U47_08595 PF00270 DEAD/DEAH box helicase C2U47_08595 PF00271 Helicase conserved C-terminal domain C2U47_08595 PF17191 RecG wedge domain C2U47_08605 PF09500 Putative thioesterase (yiiD_Cterm) C2U47_08605 PF00583 Acetyltransferase (GNAT) family C2U47_08615 PF02580 D-Tyr-tRNA(Tyr) deacylase C2U47_08620 PF03631 Virulence factor BrkB C2U47_08630 PF00120 Glutamine synthetase, catalytic domain C2U47_08630 PF03951 Glutamine synthetase, beta-Grasp domain C2U47_08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_08640 PF00512 His Kinase A (phospho-acceptor) domain C2U47_08640 PF00989 PAS fold C2U47_08645 PF02954 Bacterial regulatory protein, Fis family C2U47_08645 PF00158 Sigma-54 interaction domain C2U47_08645 PF00072 Response regulator receiver domain C2U47_08650 PF00962 Adenosine/AMP deaminase C2U47_08655 PF06969 HemN C-terminal domain C2U47_08655 PF04055 Radical SAM superfamily C2U47_08660 PF10675 Protein of unknown function (DUF2489) C2U47_08665 PF04220 Der GTPase activator (YihI) C2U47_08670 PF00034 Cytochrome c C2U47_08675 PF01926 50S ribosome-binding GTPase C2U47_08685 PF08501 Shikimate dehydrogenase substrate binding domain C2U47_08685 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C2U47_08685 PF01488 Shikimate / quinate 5-dehydrogenase C2U47_08690 PF01218 Coproporphyrinogen III oxidase C2U47_08695 PF01300 Telomere recombination C2U47_08700 PF01396 Topoisomerase DNA binding C4 zinc finger C2U47_08705 PF04361 Protein of unknown function (DUF494) C2U47_08710 PF02481 DNA recombination-mediator protein A C2U47_08710 PF17782 DprA winged helix domain C2U47_08720 PF01327 Polypeptide deformylase C2U47_08725 PF02911 Formyl transferase, C-terminal domain C2U47_08725 PF00551 Formyl transferase C2U47_08730 PF01189 16S rRNA methyltransferase RsmB/F C2U47_08730 PF01029 NusB family C2U47_08735 PF02080 TrkA-C domain C2U47_08735 PF02254 TrkA-N domain C2U47_08740 PF02386 Cation transport protein C2U47_08745 PF02646 RmuC family C2U47_08760 PF02082 Transcriptional regulator C2U47_08765 PF00294 pfkB family carbohydrate kinase C2U47_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_08770 PF03466 LysR substrate binding domain C2U47_08775 PF00117 Glutamine amidotransferase class-I C2U47_08775 PF00958 GMP synthase C terminal domain C2U47_08775 PF02540 NAD synthase C2U47_08780 PF00171 Aldehyde dehydrogenase family C2U47_08785 PF00202 Aminotransferase class-III C2U47_08790 PF07883 Cupin domain C2U47_08790 PF01381 Helix-turn-helix C2U47_08795 PF00171 Aldehyde dehydrogenase family C2U47_08805 PF12833 Helix-turn-helix domain C2U47_08810 PF01810 LysE type translocator C2U47_08815 PF06206 CpeT/CpcT family (DUF1001) C2U47_08835 PF14001 YdfZ protein C2U47_08850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_08850 PF03466 LysR substrate binding domain C2U47_08870 PF01609 Transposase DDE domain C2U47_08870 PF05598 Transposase domain (DUF772) C2U47_08880 PF00580 UvrD/REP helicase N-terminal domain C2U47_08880 PF13361 UvrD-like helicase C-terminal domain C2U47_08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_08915 PF03466 LysR substrate binding domain C2U47_08920 PF08240 Alcohol dehydrogenase GroES-like domain C2U47_08920 PF00107 Zinc-binding dehydrogenase C2U47_08925 PF00756 Putative esterase C2U47_08940 PF03781 Sulfatase-modifying factor enzyme 1 C2U47_08940 PF12867 DinB superfamily C2U47_08945 PF13593 SBF-like CPA transporter family (DUF4137) C2U47_08950 PF13520 Amino acid permease C2U47_08955 PF01588 Putative tRNA binding domain C2U47_08960 PF13520 Amino acid permease C2U47_08965 PF04074 YhcH/YjgK/YiaL C2U47_08970 PF02929 Beta galactosidase small chain C2U47_08970 PF16353 Domain of unknown function(DUF4981) C2U47_08970 PF00703 Glycosyl hydrolases family 2 C2U47_08970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2U47_08970 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2U47_08975 PF00356 Bacterial regulatory proteins, lacI family C2U47_09010 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_09015 PF01367 5'-3' exonuclease, C-terminal SAM fold C2U47_09015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2U47_09015 PF00476 DNA polymerase family A C2U47_09015 PF01612 3'-5' exonuclease C2U47_09025 PF06005 Cell division protein ZapB C2U47_09035 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_09035 PF06426 Serine acetyltransferase, N-terminal C2U47_09040 PF16916 Dimerisation domain of Zinc Transporter C2U47_09040 PF01545 Cation efflux family C2U47_09045 PF00486 Transcriptional regulatory protein, C terminal C2U47_09045 PF00072 Response regulator receiver domain C2U47_09050 PF00672 HAMP domain C2U47_09050 PF00512 His Kinase A (phospho-acceptor) domain C2U47_09050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_09050 PF16527 Two-component sensor protein CpxA, periplasmic domain C2U47_09055 PF00588 SpoU rRNA Methylase family C2U47_09060 PF01554 MatE C2U47_09065 PF02630 SCO1/SenC C2U47_09075 PF00717 Peptidase S24-like C2U47_09075 PF01726 LexA DNA binding domain C2U47_09080 PF01553 Acyltransferase C2U47_09085 PF01609 Transposase DDE domain C2U47_09085 PF13006 Insertion element 4 transposase N-terminal C2U47_09090 PF01040 UbiA prenyltransferase family C2U47_09095 PF04345 Chorismate lyase C2U47_09100 PF03748 Flagellar basal body-associated protein FliL C2U47_09120 PF00356 Bacterial regulatory proteins, lacI family C2U47_09120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U47_09125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U47_09135 PF03611 PTS system sugar-specific permease component C2U47_09150 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C2U47_09170 PF01370 NAD dependent epimerase/dehydratase family C2U47_09175 PF08360 QacR-like protein, C-terminal region C2U47_09175 PF00440 Bacterial regulatory proteins, tetR family C2U47_09180 PF00155 Aminotransferase class I and II C2U47_09185 PF08240 Alcohol dehydrogenase GroES-like domain C2U47_09185 PF00107 Zinc-binding dehydrogenase C2U47_09190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2U47_09195 PF00990 Diguanylate cyclase, GGDEF domain C2U47_09195 PF03707 Bacterial signalling protein N terminal repeat C2U47_09195 PF00563 EAL domain C2U47_09200 PF13361 UvrD-like helicase C-terminal domain C2U47_09200 PF00580 UvrD/REP helicase N-terminal domain C2U47_09205 PF00266 Aminotransferase class-V C2U47_09210 PF02657 Fe-S metabolism associated domain C2U47_09215 PF00899 ThiF family C2U47_09250 PF13443 Cro/C1-type HTH DNA-binding domain C2U47_09265 PF13808 DDE_Tnp_1-associated C2U47_09265 PF01609 Transposase DDE domain C2U47_09300 PF13592 Winged helix-turn helix C2U47_09300 PF13358 DDE superfamily endonuclease C2U47_09325 PF03601 Conserved hypothetical protein 698 C2U47_09330 PF03466 LysR substrate binding domain C2U47_09330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_09340 PF01609 Transposase DDE domain C2U47_09345 PF01695 IstB-like ATP binding protein C2U47_09350 PF00665 Integrase core domain C2U47_09370 PF00892 EamA-like transporter family C2U47_09385 PF01609 Transposase DDE domain C2U47_09385 PF13808 DDE_Tnp_1-associated C2U47_09450 PF02281 Transposase Tn5 dimerisation domain C2U47_09450 PF14706 Transposase DNA-binding C2U47_09450 PF01609 Transposase DDE domain C2U47_09460 PF13808 DDE_Tnp_1-associated C2U47_09460 PF01609 Transposase DDE domain C2U47_09475 PF00072 Response regulator receiver domain C2U47_09475 PF12833 Helix-turn-helix domain C2U47_09480 PF00512 His Kinase A (phospho-acceptor) domain C2U47_09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_09485 PF00486 Transcriptional regulatory protein, C terminal C2U47_09485 PF00072 Response regulator receiver domain C2U47_09490 PF00970 Oxidoreductase FAD-binding domain C2U47_09490 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U47_09490 PF00175 Oxidoreductase NAD-binding domain C2U47_09520 PF01609 Transposase DDE domain C2U47_09535 PF01695 IstB-like ATP binding protein C2U47_09540 PF00665 Integrase core domain C2U47_09555 PF00005 ABC transporter C2U47_09570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C2U47_09570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C2U47_09570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C2U47_09575 PF01370 NAD dependent epimerase/dehydratase family C2U47_09580 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C2U47_09605 PF01695 IstB-like ATP binding protein C2U47_09635 PF13358 DDE superfamily endonuclease C2U47_09635 PF13592 Winged helix-turn helix C2U47_09640 PF00239 Resolvase, N terminal domain C2U47_09640 PF02796 Helix-turn-helix domain of resolvase C2U47_09645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_09645 PF08447 PAS fold C2U47_09650 PF05598 Transposase domain (DUF772) C2U47_09650 PF01609 Transposase DDE domain C2U47_09655 PF01609 Transposase DDE domain C2U47_09665 PF13358 DDE superfamily endonuclease C2U47_09665 PF13592 Winged helix-turn helix C2U47_09685 PF00665 Integrase core domain C2U47_09690 PF01695 IstB-like ATP binding protein C2U47_09730 PF01177 Asp/Glu/Hydantoin racemase C2U47_09735 PF00593 TonB dependent receptor C2U47_09735 PF07715 TonB-dependent Receptor Plug Domain C2U47_09740 PF00731 AIR carboxylase C2U47_09745 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C2U47_09745 PF02222 ATP-grasp domain C2U47_09750 PF07690 Major Facilitator Superfamily C2U47_09755 PF00072 Response regulator receiver domain C2U47_09755 PF04397 LytTr DNA-binding domain C2U47_09760 PF07694 5TMR of 5TMR-LYT C2U47_09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_09760 PF06580 Histidine kinase C2U47_09770 PF00989 PAS fold C2U47_09770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_09770 PF01627 Hpt domain C2U47_09770 PF00512 His Kinase A (phospho-acceptor) domain C2U47_09770 PF00072 Response regulator receiver domain C2U47_09770 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_09775 PF00196 Bacterial regulatory proteins, luxR family C2U47_09775 PF00072 Response regulator receiver domain C2U47_09780 PF16449 Fimbrillin MatB C2U47_09785 PF18649 EcpB C-terminal domain C2U47_09790 PF16967 E-set like domain C2U47_09790 PF15976 CS1-pili formation C-terminal C2U47_09805 PF01810 LysE type translocator C2U47_09810 PF07690 Major Facilitator Superfamily C2U47_09820 PF00210 Ferritin-like domain C2U47_09825 PF00990 Diguanylate cyclase, GGDEF domain C2U47_09825 PF05230 MASE2 domain C2U47_09830 PF12241 Trans-2-enoyl-CoA reductase catalytic region C2U47_09830 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C2U47_09830 PF07055 Enoyl reductase FAD binding domain C2U47_09840 PF00582 Universal stress protein family C2U47_09845 PF00579 tRNA synthetases class I (W and Y) C2U47_09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_09850 PF03466 LysR substrate binding domain C2U47_09870 PF00892 EamA-like transporter family C2U47_09885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U47_09895 PF00625 Guanylate kinase C2U47_09900 PF01192 RNA polymerase Rpb6 C2U47_09905 PF13291 ACT domain C2U47_09905 PF04607 Region found in RelA / SpoT proteins C2U47_09905 PF02824 TGS domain C2U47_09910 PF00588 SpoU rRNA Methylase family C2U47_09910 PF12105 SpoU, rRNA methylase, C-terminal C2U47_09915 PF12146 Serine aminopeptidase, S33 C2U47_09950 PF00440 Bacterial regulatory proteins, tetR family C2U47_09955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_09960 PF00873 AcrB/AcrD/AcrF family C2U47_09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_09965 PF00512 His Kinase A (phospho-acceptor) domain C2U47_09965 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_09970 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_09970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U47_09980 PF03814 Potassium-transporting ATPase A subunit C2U47_09990 PF02669 K+-transporting ATPase, c chain C2U47_09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_09995 PF13493 Domain of unknown function (DUF4118) C2U47_09995 PF00512 His Kinase A (phospho-acceptor) domain C2U47_09995 PF02702 Osmosensitive K+ channel His kinase sensor domain C2U47_09995 PF13492 GAF domain C2U47_10000 PF00072 Response regulator receiver domain C2U47_10000 PF00486 Transcriptional regulatory protein, C terminal C2U47_10005 PF07690 Major Facilitator Superfamily C2U47_10020 PF00155 Aminotransferase class I and II C2U47_10025 PF00011 Hsp20/alpha crystallin family C2U47_10030 PF00011 Hsp20/alpha crystallin family C2U47_10035 PF12706 Beta-lactamase superfamily domain C2U47_10040 PF02311 AraC-like ligand binding domain C2U47_10040 PF12833 Helix-turn-helix domain C2U47_10045 PF01751 Toprim domain C2U47_10045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_10045 PF18053 DNA gyrase B subunit insert domain C2U47_10045 PF00986 DNA gyrase B subunit, carboxyl terminus C2U47_10045 PF00204 DNA gyrase B C2U47_10050 PF02463 RecF/RecN/SMC N terminal domain C2U47_10055 PF02768 DNA polymerase III beta subunit, C-terminal domain C2U47_10055 PF00712 DNA polymerase III beta subunit, N-terminal domain C2U47_10055 PF02767 DNA polymerase III beta subunit, central domain C2U47_10060 PF00308 Bacterial dnaA protein C2U47_10060 PF08299 Bacterial dnaA protein helix-turn-helix C2U47_10060 PF11638 DnaA N-terminal domain C2U47_10065 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_10070 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_10080 PF00468 Ribosomal protein L34 C2U47_10085 PF00825 Ribonuclease P C2U47_10090 PF01809 Putative membrane protein insertion efficiency factor C2U47_10095 PF02096 60Kd inner membrane protein C2U47_10095 PF14849 YidC periplasmic domain C2U47_10100 PF10396 GTP-binding protein TrmE N-terminus C2U47_10100 PF12631 MnmE helical domain C2U47_10100 PF01926 50S ribosome-binding GTPase C2U47_10125 PF07804 HipA-like C-terminal domain C2U47_10125 PF13657 HipA N-terminal domain C2U47_10135 PF01609 Transposase DDE domain C2U47_10145 PF01497 Periplasmic binding protein C2U47_10150 PF00005 ABC transporter C2U47_10155 PF00005 ABC transporter C2U47_10160 PF07715 TonB-dependent Receptor Plug Domain C2U47_10160 PF00593 TonB dependent receptor C2U47_10165 PF00258 Flavodoxin C2U47_10170 PF13932 GidA associated domain C2U47_10170 PF01134 Glucose inhibited division protein A C2U47_10175 PF02527 rRNA small subunit methyltransferase G C2U47_10180 PF13614 AAA domain C2U47_10185 PF02195 ParB-like nuclease domain C2U47_10185 PF17762 HTH domain found in ParB protein C2U47_10195 PF00119 ATP synthase A chain C2U47_10200 PF00137 ATP synthase subunit C C2U47_10205 PF00430 ATP synthase B/B' CF(0) C2U47_10210 PF00213 ATP synthase delta (OSCP) subunit C2U47_10215 PF00306 ATP synthase alpha/beta chain, C terminal domain C2U47_10215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U47_10215 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2U47_10220 PF00231 ATP synthase C2U47_10225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U47_10225 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2U47_10230 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C2U47_10230 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C2U47_10235 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_10235 PF12804 MobA-like NTP transferase domain C2U47_10235 PF14602 Hexapeptide repeat of succinyl-transferase C2U47_10240 PF06123 Inner membrane protein CreD C2U47_10245 PF00905 Penicillin binding protein transpeptidase domain C2U47_10255 PF00486 Transcriptional regulatory protein, C terminal C2U47_10255 PF00072 Response regulator receiver domain C2U47_10260 PF08220 DeoR-like helix-turn-helix domain C2U47_10260 PF00455 DeoR C terminal sensor domain C2U47_10265 PF01380 SIS domain C2U47_10270 PF08722 TnsA endonuclease N terminal C2U47_10270 PF08721 TnsA endonuclease C terminal C2U47_10275 PF00665 Integrase core domain C2U47_10280 PF13358 DDE superfamily endonuclease C2U47_10280 PF13592 Winged helix-turn helix C2U47_10285 PF13401 AAA domain C2U47_10285 PF11426 Tn7 transposition regulator TnsC C2U47_10290 PF06527 TniQ C2U47_10290 PF15978 Tn7-like transposition protein D C2U47_10295 PF06527 TniQ C2U47_10295 PF15978 Tn7-like transposition protein D C2U47_10300 PF18623 TnsE C-terminal domain C2U47_10310 PF00270 DEAD/DEAH box helicase C2U47_10310 PF00271 Helicase conserved C-terminal domain C2U47_10310 PF09369 Domain of unknown function (DUF1998) C2U47_10315 PF00271 Helicase conserved C-terminal domain C2U47_10315 PF00176 SNF2 family N-terminal domain C2U47_10345 PF00196 Bacterial regulatory proteins, luxR family C2U47_10345 PF03472 Autoinducer binding domain C2U47_10355 PF01618 MotA/TolQ/ExbB proton channel family C2U47_10360 PF01618 MotA/TolQ/ExbB proton channel family C2U47_10365 PF02472 Biopolymer transport protein ExbD/TolR C2U47_10370 PF03544 Gram-negative bacterial TonB protein C-terminal C2U47_10405 PF07969 Amidohydrolase family C2U47_10410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C2U47_10415 PF01209 ubiE/COQ5 methyltransferase family C2U47_10420 PF02036 SCP-2 sterol transfer family C2U47_10425 PF03109 ABC1 family C2U47_10430 PF02416 mttA/Hcf106 family C2U47_10435 PF02416 mttA/Hcf106 family C2U47_10440 PF00902 Sec-independent protein translocase protein (TatC) C2U47_10445 PF01026 TatD related DNase C2U47_10450 PF00490 Delta-aminolevulinic acid dehydratase C2U47_10455 PF01432 Peptidase family M3 C2U47_10460 PF00990 Diguanylate cyclase, GGDEF domain C2U47_10460 PF00563 EAL domain C2U47_10460 PF03707 Bacterial signalling protein N terminal repeat C2U47_10465 PF04445 Putative SAM-dependent methyltransferase C2U47_10475 PF02541 Ppx/GppA phosphatase family C2U47_10480 PF00271 Helicase conserved C-terminal domain C2U47_10480 PF00270 DEAD/DEAH box helicase C2U47_10485 PF00085 Thioredoxin C2U47_10490 PF07497 Rho termination factor, RNA-binding domain C2U47_10490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U47_10490 PF07498 Rho termination factor, N-terminal domain C2U47_10500 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C2U47_10505 PF00175 Oxidoreductase NAD-binding domain C2U47_10510 PF04380 Membrane fusogenic activity C2U47_10515 PF12262 Bacterial virulence factor lipase N-terminal C2U47_10520 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C2U47_10520 PF01694 Rhomboid family C2U47_10525 PF00581 Rhodanese-like domain C2U47_10530 PF01810 LysE type translocator C2U47_10540 PF00005 ABC transporter C2U47_10545 PF00005 ABC transporter C2U47_10545 PF12399 Branched-chain amino acid ATP-binding cassette transporter C2U47_10550 PF11862 Domain of unknown function (DUF3382) C2U47_10550 PF02653 Branched-chain amino acid transport system / permease component C2U47_10555 PF02653 Branched-chain amino acid transport system / permease component C2U47_10560 PF13458 Periplasmic binding protein C2U47_10565 PF00356 Bacterial regulatory proteins, lacI family C2U47_10570 PF01590 GAF domain C2U47_10570 PF00158 Sigma-54 interaction domain C2U47_10575 PF00753 Metallo-beta-lactamase superfamily C2U47_10575 PF00301 Rubredoxin C2U47_10575 PF00258 Flavodoxin C2U47_10580 PF18113 Rubredoxin binding C-terminal domain C2U47_10580 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_10590 PF12801 4Fe-4S binding domain C2U47_10600 PF01212 Beta-eliminating lyase C2U47_10605 PF03222 Tryptophan/tyrosine permease family C2U47_10610 PF03222 Tryptophan/tyrosine permease family C2U47_10630 PF00563 EAL domain C2U47_10630 PF01590 GAF domain C2U47_10630 PF00360 Phytochrome region C2U47_10630 PF00990 Diguanylate cyclase, GGDEF domain C2U47_10635 PF02092 Glycyl-tRNA synthetase beta subunit C2U47_10635 PF05746 DALR anticodon binding domain C2U47_10640 PF02091 Glycyl-tRNA synthetase alpha subunit C2U47_10645 PF03352 Methyladenine glycosylase C2U47_10650 PF00857 Isochorismatase family C2U47_10665 PF13488 Glycine zipper C2U47_10665 PF00691 OmpA family C2U47_10685 PF01042 Endoribonuclease L-PSP C2U47_10690 PF01206 Sulfurtransferase TusA C2U47_10720 PF00512 His Kinase A (phospho-acceptor) domain C2U47_10720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_10720 PF00672 HAMP domain C2U47_10725 PF00072 Response regulator receiver domain C2U47_10725 PF00486 Transcriptional regulatory protein, C terminal C2U47_10730 PF02803 Thiolase, C-terminal domain C2U47_10730 PF00108 Thiolase, N-terminal domain C2U47_10735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C2U47_10735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C2U47_10735 PF00378 Enoyl-CoA hydratase/isomerase C2U47_10740 PF13193 AMP-binding enzyme C-terminal domain C2U47_10740 PF00501 AMP-binding enzyme C2U47_10745 PF00557 Metallopeptidase family M24 C2U47_10750 PF09186 Domain of unknown function (DUF1949) C2U47_10750 PF01205 Uncharacterized protein family UPF0029 C2U47_10755 PF02386 Cation transport protein C2U47_10760 PF12724 Flavodoxin domain C2U47_10785 PF13380 CoA binding domain C2U47_10785 PF13607 Succinyl-CoA ligase like flavodoxin domain C2U47_10785 PF00583 Acetyltransferase (GNAT) family C2U47_10795 PF03466 LysR substrate binding domain C2U47_10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_10800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C2U47_10800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C2U47_10805 PF00342 Phosphoglucose isomerase C2U47_10815 PF00924 Mechanosensitive ion channel C2U47_10815 PF05552 Conserved TM helix C2U47_10825 PF00440 Bacterial regulatory proteins, tetR family C2U47_10830 PF00692 dUTPase C2U47_10835 PF04127 DNA / pantothenate metabolism flavoprotein C2U47_10835 PF02441 Flavoprotein C2U47_10840 PF04002 RadC-like JAB domain C2U47_10845 PF00830 Ribosomal L28 family C2U47_10850 PF00471 Ribosomal protein L33 C2U47_10860 PF06827 Zinc finger found in FPG and IleRS C2U47_10860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C2U47_10860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C2U47_10865 PF04393 Protein of unknown function (DUF535) C2U47_10870 PF01467 Cytidylyltransferase-like C2U47_10875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U47_10880 PF00535 Glycosyl transferase family 2 C2U47_10885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2U47_10890 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C2U47_10900 PF03755 YicC-like family, N-terminal region C2U47_10900 PF08340 Domain of unknown function (DUF1732) C2U47_10905 PF03725 3' exoribonuclease family, domain 2 C2U47_10905 PF01138 3' exoribonuclease family, domain 1 C2U47_10910 PF00156 Phosphoribosyl transferase domain C2U47_10915 PF00403 Heavy-metal-associated domain C2U47_10920 PF00376 MerR family regulatory protein C2U47_10920 PF09278 MerR, DNA binding C2U47_10925 PF01590 GAF domain C2U47_10925 PF00563 EAL domain C2U47_10925 PF00360 Phytochrome region C2U47_10925 PF00990 Diguanylate cyclase, GGDEF domain C2U47_10930 PF06288 Protein of unknown function (DUF1040) C2U47_10935 PF13746 4Fe-4S dicluster domain C2U47_10935 PF12801 4Fe-4S binding domain C2U47_10935 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C2U47_10940 PF01636 Phosphotransferase enzyme family C2U47_10945 PF01323 DSBA-like thioredoxin domain C2U47_10950 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C2U47_10950 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C2U47_10955 PF00857 Isochorismatase family C2U47_10965 PF04463 Protein of unknown function (DUF523) C2U47_10970 PF01553 Acyltransferase C2U47_10975 PF01553 Acyltransferase C2U47_11020 PF00665 Integrase core domain C2U47_11025 PF01695 IstB-like ATP binding protein C2U47_11035 PF00145 C-5 cytosine-specific DNA methylase C2U47_11065 PF13358 DDE superfamily endonuclease C2U47_11065 PF13592 Winged helix-turn helix C2U47_11090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U47_11090 PF00205 Thiamine pyrophosphate enzyme, central domain C2U47_11090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U47_11100 PF01063 Amino-transferase class IV C2U47_11105 PF00920 Dehydratase family C2U47_11110 PF00585 C-terminal regulatory domain of Threonine dehydratase C2U47_11110 PF00291 Pyridoxal-phosphate dependent enzyme C2U47_11115 PF01389 OmpA-like transmembrane domain C2U47_11115 PF00691 OmpA family C2U47_11120 PF00271 Helicase conserved C-terminal domain C2U47_11120 PF00270 DEAD/DEAH box helicase C2U47_11120 PF17764 3′ DNA-binding domain (3′BD) C2U47_11120 PF18074 Primosomal protein N C-terminal domain C2U47_11120 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C2U47_11125 PF01197 Ribosomal protein L31 C2U47_11130 PF13460 NAD(P)H-binding C2U47_11130 PF11066 Protein of unknown function (DUF2867) C2U47_11135 PF00390 Malic enzyme, N-terminal domain C2U47_11135 PF03949 Malic enzyme, NAD binding domain C2U47_11145 PF00672 HAMP domain C2U47_11145 PF00512 His Kinase A (phospho-acceptor) domain C2U47_11145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_11155 PF00072 Response regulator receiver domain C2U47_11155 PF00486 Transcriptional regulatory protein, C terminal C2U47_11160 PF05958 tRNA (Uracil-5-)-methyltransferase C2U47_11205 PF02903 Alpha amylase, N-terminal ig-like domain C2U47_11205 PF00128 Alpha amylase, catalytic domain C2U47_11220 PF00012 Hsp70 protein C2U47_11225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U47_11225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U47_11230 PF05981 CreA protein C2U47_11245 PF01258 Prokaryotic dksA/traR C4-type zinc finger C2U47_11250 PF00120 Glutamine synthetase, catalytic domain C2U47_11255 PF00202 Aminotransferase class-III C2U47_11260 PF13416 Bacterial extracellular solute-binding protein C2U47_11270 PF08402 TOBE domain C2U47_11270 PF00005 ABC transporter C2U47_11275 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_11280 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_11285 PF03475 3-alpha domain C2U47_11285 PF03473 MOSC domain C2U47_11300 PF03061 Thioesterase superfamily C2U47_11305 PF00570 HRDC domain C2U47_11305 PF16124 RecQ zinc-binding C2U47_11305 PF00270 DEAD/DEAH box helicase C2U47_11305 PF00271 Helicase conserved C-terminal domain C2U47_11305 PF09382 RQC domain C2U47_11310 PF00034 Cytochrome c C2U47_11315 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C2U47_11325 PF02592 Putative vitamin uptake transporter C2U47_11330 PF03737 Aldolase/RraA C2U47_11340 PF14824 Sirohaem biosynthesis protein central C2U47_11340 PF10414 Sirohaem synthase dimerisation region C2U47_11340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U47_11345 PF01226 Formate/nitrite transporter C2U47_11350 PF13806 Rieske-like [2Fe-2S] domain C2U47_11355 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_11355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U47_11355 PF18267 Rubredoxin NAD+ reductase C-terminal domain C2U47_11355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U47_11355 PF04324 BFD-like [2Fe-2S] binding domain C2U47_11370 PF00005 ABC transporter C2U47_11375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_11390 PF07690 Major Facilitator Superfamily C2U47_11395 PF07724 AAA domain (Cdc48 subfamily) C2U47_11395 PF00004 ATPase family associated with various cellular activities (AAA) C2U47_11395 PF10431 C-terminal, D2-small domain, of ClpB protein C2U47_11400 PF00227 Proteasome subunit C2U47_11410 PF03485 Arginyl tRNA synthetase N terminal domain C2U47_11410 PF00750 tRNA synthetases class I (R) C2U47_11410 PF05746 DALR anticodon binding domain C2U47_11420 PF04542 Sigma-70 region 2 C2U47_11420 PF04545 Sigma-70, region 4 C2U47_11425 PF12973 ChrR Cupin-like domain C2U47_11430 PF02673 Bacitracin resistance protein BacA C2U47_11435 PF00248 Aldo/keto reductase family C2U47_11440 PF01263 Aldose 1-epimerase C2U47_11445 PF08544 GHMP kinases C terminal C2U47_11445 PF00288 GHMP kinases N terminal domain C2U47_11445 PF10509 Galactokinase galactose-binding signature C2U47_11450 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C2U47_11450 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C2U47_11455 PF16363 GDP-mannose 4,6 dehydratase C2U47_11460 PF00356 Bacterial regulatory proteins, lacI family C2U47_11465 PF00703 Glycosyl hydrolases family 2 C2U47_11465 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C2U47_11465 PF02929 Beta galactosidase small chain C2U47_11465 PF16353 Domain of unknown function(DUF4981) C2U47_11465 PF02837 Glycosyl hydrolases family 2, sugar binding domain C2U47_11470 PF13407 Periplasmic binding protein domain C2U47_11475 PF00005 ABC transporter C2U47_11480 PF02653 Branched-chain amino acid transport system / permease component C2U47_11485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_11485 PF02743 Cache domain C2U47_11485 PF00672 HAMP domain C2U47_11500 PF00696 Amino acid kinase family C2U47_11505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U47_11505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U47_11515 PF02863 Arginine repressor, C-terminal domain C2U47_11515 PF01316 Arginine repressor, DNA binding domain C2U47_11520 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C2U47_11520 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C2U47_11525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2U47_11525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2U47_11545 PF03466 LysR substrate binding domain C2U47_11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_11555 PF00672 HAMP domain C2U47_11555 PF02743 Cache domain C2U47_11555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_11565 PF08212 Lipocalin-like domain C2U47_11575 PF00465 Iron-containing alcohol dehydrogenase C2U47_11580 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C2U47_11580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2U47_11580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2U47_11585 PF02233 NAD(P) transhydrogenase beta subunit C2U47_11590 PF08348 YheO-like PAS domain C2U47_11590 PF13309 HTH domain C2U47_11595 PF03313 Serine dehydratase alpha chain C2U47_11600 PF13525 Outer membrane lipoprotein C2U47_11605 PF00849 RNA pseudouridylate synthase C2U47_11605 PF01479 S4 domain C2U47_11615 PF07724 AAA domain (Cdc48 subfamily) C2U47_11615 PF17871 AAA lid domain C2U47_11615 PF00004 ATPase family associated with various cellular activities (AAA) C2U47_11615 PF02861 Clp amino terminal domain, pathogenicity island component C2U47_11615 PF10431 C-terminal, D2-small domain, of ClpB protein C2U47_11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_11620 PF03466 LysR substrate binding domain C2U47_11635 PF03590 Aspartate-ammonia ligase C2U47_11640 PF01037 Lrp/AsnC ligand binding domain C2U47_11650 PF00478 IMP dehydrogenase / GMP reductase domain C2U47_11650 PF00571 CBS domain C2U47_11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_11670 PF00512 His Kinase A (phospho-acceptor) domain C2U47_11680 PF00072 Response regulator receiver domain C2U47_11680 PF00158 Sigma-54 interaction domain C2U47_11685 PF06496 Protein of unknown function (DUF1097) C2U47_11695 PF00174 Oxidoreductase molybdopterin binding domain C2U47_11700 PF01794 Ferric reductase like transmembrane component C2U47_11715 PF00072 Response regulator receiver domain C2U47_11715 PF00486 Transcriptional regulatory protein, C terminal C2U47_11720 PF08918 PhoQ Sensor C2U47_11720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_11730 PF18364 Molybdopterin oxidoreductase N-terminal domain C2U47_11730 PF01568 Molydopterin dinucleotide binding domain C2U47_11730 PF00384 Molybdopterin oxidoreductase C2U47_11735 PF03264 NapC/NirT cytochrome c family, N-terminal region C2U47_11740 PF01131 DNA topoisomerase C2U47_11740 PF01751 Toprim domain C2U47_11750 PF02080 TrkA-C domain C2U47_11750 PF02254 TrkA-N domain C2U47_11755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C2U47_11755 PF01565 FAD binding domain C2U47_11760 PF03099 Biotin/lipoate A/B protein ligase family C2U47_11760 PF02237 Biotin protein ligase C terminal domain C2U47_11760 PF08279 HTH domain C2U47_11765 PF00485 Phosphoribulokinase / Uridine kinase family C2U47_11780 PF00009 Elongation factor Tu GTP binding domain C2U47_11780 PF03144 Elongation factor Tu domain 2 C2U47_11780 PF03143 Elongation factor Tu C-terminal domain C2U47_11790 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C2U47_11795 PF02357 Transcription termination factor nusG C2U47_11795 PF00467 KOW motif C2U47_11800 PF03946 Ribosomal protein L11, N-terminal domain C2U47_11800 PF00298 Ribosomal protein L11, RNA binding domain C2U47_11805 PF00687 Ribosomal protein L1p/L10e family C2U47_11810 PF00466 Ribosomal protein L10 C2U47_11815 PF16320 Ribosomal protein L7/L12 dimerisation domain C2U47_11815 PF00542 Ribosomal protein L7/L12 C-terminal domain C2U47_11820 PF10385 RNA polymerase beta subunit external 1 domain C2U47_11820 PF04560 RNA polymerase Rpb2, domain 7 C2U47_11820 PF04563 RNA polymerase beta subunit C2U47_11820 PF04561 RNA polymerase Rpb2, domain 2 C2U47_11820 PF00562 RNA polymerase Rpb2, domain 6 C2U47_11820 PF04565 RNA polymerase Rpb2, domain 3 C2U47_11825 PF04983 RNA polymerase Rpb1, domain 3 C2U47_11825 PF00623 RNA polymerase Rpb1, domain 2 C2U47_11825 PF04998 RNA polymerase Rpb1, domain 5 C2U47_11825 PF05000 RNA polymerase Rpb1, domain 4 C2U47_11825 PF04997 RNA polymerase Rpb1, domain 1 C2U47_11830 PF08348 YheO-like PAS domain C2U47_11830 PF13309 HTH domain C2U47_11835 PF01042 Endoribonuclease L-PSP C2U47_11840 PF02635 DsrE/DsrF-like family C2U47_11845 PF02635 DsrE/DsrF-like family C2U47_11850 PF04077 DsrH like protein C2U47_11855 PF00164 Ribosomal protein S12/S23 C2U47_11860 PF00177 Ribosomal protein S7p/S5e C2U47_11865 PF14492 Elongation Factor G, domain II C2U47_11865 PF00679 Elongation factor G C-terminus C2U47_11865 PF03764 Elongation factor G, domain IV C2U47_11865 PF00009 Elongation factor Tu GTP binding domain C2U47_11865 PF03144 Elongation factor Tu domain 2 C2U47_11870 PF03143 Elongation factor Tu C-terminal domain C2U47_11870 PF00009 Elongation factor Tu GTP binding domain C2U47_11870 PF03144 Elongation factor Tu domain 2 C2U47_11910 PF03079 ARD/ARD' family C2U47_11915 PF00860 Permease family C2U47_11920 PF02733 Dak1 domain C2U47_11925 PF02734 DAK2 domain C2U47_11930 PF05524 PEP-utilising enzyme, N-terminal C2U47_11930 PF00391 PEP-utilising enzyme, mobile domain C2U47_11930 PF00381 PTS HPr component phosphorylation site C2U47_11930 PF03610 PTS system fructose IIA component C2U47_11935 PF00158 Sigma-54 interaction domain C2U47_11935 PF00989 PAS fold C2U47_11935 PF02954 Bacterial regulatory protein, Fis family C2U47_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_11940 PF03466 LysR substrate binding domain C2U47_11945 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2U47_11950 PF00795 Carbon-nitrogen hydrolase C2U47_11955 PF13416 Bacterial extracellular solute-binding protein C2U47_11965 PF00106 short chain dehydrogenase C2U47_11970 PF13006 Insertion element 4 transposase N-terminal C2U47_11970 PF01609 Transposase DDE domain C2U47_11975 PF01594 AI-2E family transporter C2U47_11980 PF00293 NUDIX domain C2U47_12000 PF00199 Catalase C2U47_12000 PF06628 Catalase-related immune-responsive C2U47_12005 PF00583 Acetyltransferase (GNAT) family C2U47_12025 PF00990 Diguanylate cyclase, GGDEF domain C2U47_12025 PF00072 Response regulator receiver domain C2U47_12035 PF08402 TOBE domain C2U47_12035 PF00005 ABC transporter C2U47_12045 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_12060 PF00392 Bacterial regulatory proteins, gntR family C2U47_12060 PF07702 UTRA domain C2U47_12070 PF03466 LysR substrate binding domain C2U47_12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_12080 PF17954 Quercetinase C-terminal cupin domain C2U47_12080 PF02678 Pirin C2U47_12085 PF07681 DoxX C2U47_12090 PF17946 RecC C-terminal domain C2U47_12095 PF00580 UvrD/REP helicase N-terminal domain C2U47_12095 PF13361 UvrD-like helicase C-terminal domain C2U47_12095 PF12705 PD-(D/E)XK nuclease superfamily C2U47_12100 PF13538 UvrD-like helicase C-terminal domain C2U47_12105 PF17092 Penicillin-binding protein OB-like domain C2U47_12105 PF00905 Penicillin binding protein transpeptidase domain C2U47_12105 PF00912 Transglycosylase C2U47_12120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U47_12130 PF00909 Ammonium Transporter Family C2U47_12135 PF00543 Nitrogen regulatory protein P-II C2U47_12140 PF08448 PAS fold C2U47_12140 PF00990 Diguanylate cyclase, GGDEF domain C2U47_12150 PF00672 HAMP domain C2U47_12150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_12160 PF00486 Transcriptional regulatory protein, C terminal C2U47_12160 PF00072 Response regulator receiver domain C2U47_12170 PF00313 'Cold-shock' DNA-binding domain C2U47_12195 PF01381 Helix-turn-helix C2U47_12215 PF01609 Transposase DDE domain C2U47_12215 PF05598 Transposase domain (DUF772) C2U47_12230 PF00440 Bacterial regulatory proteins, tetR family C2U47_12230 PF02909 Tetracyclin repressor-like, C-terminal domain C2U47_12240 PF13358 DDE superfamily endonuclease C2U47_12240 PF13592 Winged helix-turn helix C2U47_12255 PF13538 UvrD-like helicase C-terminal domain C2U47_12255 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C2U47_12255 PF14490 Helix-hairpin-helix containing domain C2U47_12285 PF00436 Single-strand binding protein family C2U47_12290 PF00196 Bacterial regulatory proteins, luxR family C2U47_12300 PF03922 OmpW family C2U47_12305 PF00672 HAMP domain C2U47_12305 PF12729 Four helix bundle sensory module for signal transduction C2U47_12305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_12320 PF02219 Methylenetetrahydrofolate reductase C2U47_12330 PF03594 Benzoate membrane transport protein C2U47_12335 PF07883 Cupin domain C2U47_12335 PF01381 Helix-turn-helix C2U47_12365 PF04363 Protein of unknown function (DUF496) C2U47_12375 PF04751 Protein of unknown function (DUF615) C2U47_12380 PF01523 Putative modulator of DNA gyrase C2U47_12385 PF07719 Tetratricopeptide repeat C2U47_12385 PF07219 HemY protein N-terminus C2U47_12390 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C2U47_12395 PF02602 Uroporphyrinogen-III synthase HemD C2U47_12400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C2U47_12400 PF03900 Porphobilinogen deaminase, C-terminal domain C2U47_12405 PF01295 Adenylate cyclase, class-I C2U47_12405 PF12633 Adenylate cyclase NT domain C2U47_12410 PF02230 Phospholipase/Carboxylesterase C2U47_12415 PF01491 Frataxin-like domain C2U47_12425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U47_12425 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2U47_12430 PF01678 Diaminopimelate epimerase C2U47_12440 PF02899 Phage integrase, N-terminal SAM-like domain C2U47_12440 PF00589 Phage integrase family C2U47_12445 PF13419 Haloacid dehalogenase-like hydrolase C2U47_12455 PF07722 Peptidase C26 C2U47_12475 PF04307 LexA-binding, inner membrane-associated putative hydrolase C2U47_12480 PF02464 Competence-damaged protein C2U47_12480 PF00994 Probable molybdopterin binding domain C2U47_12490 PF04204 Homoserine O-succinyltransferase C2U47_12500 PF01037 Lrp/AsnC ligand binding domain C2U47_12505 PF00884 Sulfatase C2U47_12520 PF02308 MgtC family C2U47_12540 PF00106 short chain dehydrogenase C2U47_12555 PF00465 Iron-containing alcohol dehydrogenase C2U47_12565 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U47_12575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_12575 PF12793 Sugar transport-related sRNA regulator N-term C2U47_12595 PF00561 alpha/beta hydrolase fold C2U47_12605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2U47_12605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2U47_12610 PF02698 DUF218 domain C2U47_12615 PF01752 Collagenase C2U47_12615 PF08453 Peptidase family M9 N-terminal C2U47_12625 PF13378 Enolase C-terminal domain-like C2U47_12630 PF00378 Enoyl-CoA hydratase/isomerase C2U47_12635 PF12697 Alpha/beta hydrolase family C2U47_12640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U47_12640 PF16582 Middle domain of thiamine pyrophosphate C2U47_12640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C2U47_12645 PF00425 chorismate binding enzyme C2U47_12650 PF01040 UbiA prenyltransferase family C2U47_12670 PF03880 DbpA RNA binding domain C2U47_12670 PF00271 Helicase conserved C-terminal domain C2U47_12670 PF00270 DEAD/DEAH box helicase C2U47_12675 PF07670 Nucleoside recognition C2U47_12675 PF07662 Na+ dependent nucleoside transporter C-terminus C2U47_12675 PF01773 Na+ dependent nucleoside transporter N-terminus C2U47_12690 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C2U47_12695 PF01544 CorA-like Mg2+ transporter protein C2U47_12710 PF00999 Sodium/hydrogen exchanger family C2U47_12710 PF02080 TrkA-C domain C2U47_12710 PF03471 Transporter associated domain C2U47_12715 PF05068 Mannitol repressor C2U47_12720 PF01232 Mannitol dehydrogenase Rossmann domain C2U47_12720 PF08125 Mannitol dehydrogenase C-terminal domain C2U47_12730 PF08206 Ribonuclease B OB domain C2U47_12730 PF17876 Cold shock domain C2U47_12730 PF00773 RNB domain C2U47_12740 PF00765 Autoinducer synthase C2U47_12745 PF00196 Bacterial regulatory proteins, luxR family C2U47_12745 PF03472 Autoinducer binding domain C2U47_12750 PF01810 LysE type translocator C2U47_12755 PF02872 5'-nucleotidase, C-terminal domain C2U47_12755 PF00149 Calcineurin-like phosphoesterase C2U47_12760 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U47_12765 PF01467 Cytidylyltransferase-like C2U47_12765 PF00294 pfkB family carbohydrate kinase C2U47_12770 PF01609 Transposase DDE domain C2U47_12770 PF13006 Insertion element 4 transposase N-terminal C2U47_12775 PF02321 Outer membrane efflux protein C2U47_12780 PF00293 NUDIX domain C2U47_12785 PF06853 Protein of unknown function (DUF1249) C2U47_12790 PF00149 Calcineurin-like phosphoesterase C2U47_12795 PF05728 Uncharacterised protein family (UPF0227) C2U47_12800 PF00293 NUDIX domain C2U47_12810 PF07869 Protein of unknown function (DUF1656) C2U47_12815 PF00529 HlyD membrane-fusion protein of T1SS C2U47_12815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_12820 PF04632 Fusaric acid resistance protein family C2U47_12825 PF01751 Toprim domain C2U47_12825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_12825 PF00986 DNA gyrase B subunit, carboxyl terminus C2U47_12825 PF00204 DNA gyrase B C2U47_12830 PF03989 DNA gyrase C-terminal domain, beta-propeller C2U47_12830 PF00521 DNA gyrase/topoisomerase IV, subunit A C2U47_12865 PF00909 Ammonium Transporter Family C2U47_12870 PF05958 tRNA (Uracil-5-)-methyltransferase C2U47_12870 PF01938 TRAM domain C2U47_12880 PF14245 Type IV pilin PilA C2U47_12880 PF07963 Prokaryotic N-terminal methylation motif C2U47_12885 PF01026 TatD related DNase C2U47_12890 PF07670 Nucleoside recognition C2U47_12890 PF07662 Na+ dependent nucleoside transporter C-terminus C2U47_12890 PF01773 Na+ dependent nucleoside transporter N-terminus C2U47_12900 PF01791 DeoC/LacD family aldolase C2U47_12905 PF00591 Glycosyl transferase family, a/b domain C2U47_12905 PF02885 Glycosyl transferase family, helical bundle domain C2U47_12905 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C2U47_12910 PF01676 Metalloenzyme superfamily C2U47_12915 PF01048 Phosphorylase superfamily C2U47_12920 PF16998 17 kDa outer membrane surface antigen C2U47_12920 PF05433 Glycine zipper 2TM domain C2U47_12925 PF13426 PAS domain C2U47_12925 PF05231 MASE1 C2U47_12925 PF00990 Diguanylate cyclase, GGDEF domain C2U47_12925 PF00563 EAL domain C2U47_12925 PF08448 PAS fold C2U47_12925 PF08447 PAS fold C2U47_12935 PF18429 Domain of unknown function (DUF5609) C2U47_12950 PF18073 Rubredoxin metal binding domain C2U47_12955 PF07238 PilZ domain C2U47_12960 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C2U47_12965 PF00216 Bacterial DNA-binding protein C2U47_12980 PF01207 Dihydrouridine synthase (Dus) C2U47_12985 PF01475 Ferric uptake regulator family C2U47_13000 PF05525 Branched-chain amino acid transport protein C2U47_13005 PF05175 Methyltransferase small domain C2U47_13010 PF00271 Helicase conserved C-terminal domain C2U47_13010 PF00270 DEAD/DEAH box helicase C2U47_13015 PF03883 Peroxide stress protein YaaA C2U47_13020 PF00437 Type II/IV secretion system protein C2U47_13025 PF00437 Type II/IV secretion system protein C2U47_13030 PF01168 Alanine racemase, N-terminal domain C2U47_13035 PF14748 Pyrroline-5-carboxylate reductase dimerisation C2U47_13035 PF03807 NADP oxidoreductase coenzyme F420-dependent C2U47_13040 PF02325 YGGT family C2U47_13045 PF02594 Uncharacterised ACR, YggU family COG1872 C2U47_13070 PF17853 GGDEF-like domain C2U47_13070 PF13556 PucR C-terminal helix-turn-helix domain C2U47_13070 PF05651 Putative sugar diacid recognition C2U47_13075 PF02447 GntP family permease C2U47_13080 PF02595 Glycerate kinase family C2U47_13090 PF00255 Glutathione peroxidase C2U47_13095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_13095 PF03466 LysR substrate binding domain C2U47_13100 PF01773 Na+ dependent nucleoside transporter N-terminus C2U47_13100 PF07662 Na+ dependent nucleoside transporter C-terminus C2U47_13100 PF07670 Nucleoside recognition C2U47_13110 PF00472 RF-1 domain C2U47_13115 PF00543 Nitrogen regulatory protein P-II C2U47_13130 PF08402 TOBE domain C2U47_13130 PF00005 ABC transporter C2U47_13135 PF04261 Dyp-type peroxidase family C2U47_13140 PF02863 Arginine repressor, C-terminal domain C2U47_13140 PF01316 Arginine repressor, DNA binding domain C2U47_13145 PF00005 ABC transporter C2U47_13150 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_13155 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_13160 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_13165 PF00056 lactate/malate dehydrogenase, NAD binding domain C2U47_13165 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C2U47_13175 PF08238 Sel1 repeat C2U47_13180 PF00042 Globin C2U47_13180 PF00175 Oxidoreductase NAD-binding domain C2U47_13180 PF00970 Oxidoreductase FAD-binding domain C2U47_13185 PF02082 Transcriptional regulator C2U47_13190 PF03471 Transporter associated domain C2U47_13190 PF01595 Cyclin M transmembrane N-terminal domain C2U47_13190 PF00571 CBS domain C2U47_13195 PF01578 Cytochrome C assembly protein C2U47_13200 PF02881 SRP54-type protein, helical bundle domain C2U47_13200 PF00448 SRP54-type protein, GTPase domain C2U47_13200 PF02978 Signal peptide binding domain C2U47_13205 PF00886 Ribosomal protein S16 C2U47_13210 PF01782 RimM N-terminal domain C2U47_13210 PF05239 PRC-barrel domain C2U47_13215 PF01746 tRNA (Guanine-1)-methyltransferase C2U47_13220 PF01245 Ribosomal protein L19 C2U47_13230 PF02976 DNA mismatch repair enzyme MutH C2U47_13240 PF02896 PEP-utilising enzyme, TIM barrel domain C2U47_13240 PF01590 GAF domain C2U47_13240 PF00391 PEP-utilising enzyme, mobile domain C2U47_13240 PF05524 PEP-utilising enzyme, N-terminal C2U47_13245 PF01790 Prolipoprotein diacylglyceryl transferase C2U47_13250 PF00303 Thymidylate synthase C2U47_13255 PF06965 Na+/H+ antiporter 1 C2U47_13265 PF03466 LysR substrate binding domain C2U47_13265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_13270 PF01022 Bacterial regulatory protein, arsR family C2U47_13275 PF01649 Ribosomal protein S20 C2U47_13280 PF03023 Lipid II flippase MurJ C2U47_13285 PF01687 Riboflavin kinase C2U47_13285 PF06574 FAD synthetase C2U47_13290 PF06827 Zinc finger found in FPG and IleRS C2U47_13290 PF08264 Anticodon-binding domain of tRNA C2U47_13290 PF00133 tRNA synthetases class I (I, L, M and V) C2U47_13295 PF01252 Signal peptidase (SPase) II C2U47_13300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U47_13305 PF02401 LytB protein C2U47_13310 PF14245 Type IV pilin PilA C2U47_13310 PF07963 Prokaryotic N-terminal methylation motif C2U47_13335 PF02281 Transposase Tn5 dimerisation domain C2U47_13335 PF14706 Transposase DNA-binding C2U47_13335 PF01609 Transposase DDE domain C2U47_13360 PF02540 NAD synthase C2U47_13360 PF00795 Carbon-nitrogen hydrolase C2U47_13365 PF00543 Nitrogen regulatory protein P-II C2U47_13375 PF02664 S-Ribosylhomocysteinase (LuxS) C2U47_13380 PF00990 Diguanylate cyclase, GGDEF domain C2U47_13385 PF08206 Ribonuclease B OB domain C2U47_13385 PF00773 RNB domain C2U47_13385 PF08461 Ribonuclease R winged-helix domain C2U47_13385 PF17876 Cold shock domain C2U47_13385 PF00575 S1 RNA binding domain C2U47_13390 PF00588 SpoU rRNA Methylase family C2U47_13390 PF08032 RNA 2'-O ribose methyltransferase substrate binding C2U47_13400 PF13673 Acetyltransferase (GNAT) domain C2U47_13410 PF01566 Natural resistance-associated macrophage protein C2U47_13415 PF01250 Ribosomal protein S6 C2U47_13420 PF01084 Ribosomal protein S18 C2U47_13425 PF01281 Ribosomal protein L9, N-terminal domain C2U47_13425 PF03948 Ribosomal protein L9, C-terminal domain C2U47_13430 PF00970 Oxidoreductase FAD-binding domain C2U47_13430 PF00175 Oxidoreductase NAD-binding domain C2U47_13450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U47_13460 PF08659 KR domain C2U47_13460 PF00698 Acyl transferase domain C2U47_13460 PF14765 Polyketide synthase dehydratase C2U47_13460 PF08990 Erythronolide synthase docking C2U47_13460 PF16197 Ketoacyl-synthetase C-terminal extension C2U47_13460 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U47_13460 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U47_13460 PF08240 Alcohol dehydrogenase GroES-like domain C2U47_13460 PF00550 Phosphopantetheine attachment site C2U47_13465 PF09335 SNARE associated Golgi protein C2U47_13470 PF00675 Insulinase (Peptidase family M16) C2U47_13470 PF05193 Peptidase M16 inactive domain C2U47_13475 PF04262 Glutamate-cysteine ligase C2U47_13480 PF03605 Anaerobic c4-dicarboxylate membrane transporter C2U47_13485 PF00206 Lyase C2U47_13485 PF10415 Fumarase C C-terminus C2U47_13490 PF04186 FxsA cytoplasmic membrane protein C2U47_13500 PF00166 Chaperonin 10 Kd subunit C2U47_13505 PF00118 TCP-1/cpn60 chaperonin family C2U47_13515 PF03707 Bacterial signalling protein N terminal repeat C2U47_13515 PF00563 EAL domain C2U47_13515 PF00990 Diguanylate cyclase, GGDEF domain C2U47_13525 PF00849 RNA pseudouridylate synthase C2U47_13530 PF18339 RapA N-terminal Tudor like domain 1 C2U47_13530 PF00271 Helicase conserved C-terminal domain C2U47_13530 PF12137 RNA polymerase recycling family C-terminal C2U47_13530 PF18337 RapA N-terminal Tudor like domain C2U47_13530 PF00176 SNF2 family N-terminal domain C2U47_13570 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_13575 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_13580 PF00005 ABC transporter C2U47_13580 PF12857 TOBE-like domain C2U47_13585 PF03466 LysR substrate binding domain C2U47_13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_13590 PF18416 N-acetylglucosamine binding protein domain 2 C2U47_13590 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C2U47_13595 PF00672 HAMP domain C2U47_13595 PF17200 Single Cache domain 2 C2U47_13595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_13620 PF11230 Protein of unknown function (DUF3029) C2U47_13625 PF04055 Radical SAM superfamily C2U47_13635 PF03466 LysR substrate binding domain C2U47_13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_13640 PF00155 Aminotransferase class I and II C2U47_13645 PF11658 Cellulose biosynthesis protein BcsG C2U47_13655 PF06564 Cellulose biosynthesis protein BcsQ C2U47_13660 PF07238 PilZ domain C2U47_13660 PF00535 Glycosyl transferase family 2 C2U47_13665 PF03170 Bacterial cellulose synthase subunit C2U47_13670 PF01270 Glycosyl hydrolases family 8 C2U47_13675 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) C2U47_13680 PF02583 Metal-sensitive transcriptional repressor C2U47_13695 PF17967 Pullulanase N2 domain C2U47_13695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U47_13695 PF11852 Domain of unknown function (DUF3372) C2U47_13695 PF03714 Bacterial pullanase-associated domain C2U47_13695 PF18494 Pullulanase Ins domain C2U47_13705 PF08534 Redoxin C2U47_13710 PF00271 Helicase conserved C-terminal domain C2U47_13710 PF00270 DEAD/DEAH box helicase C2U47_13715 PF08447 PAS fold C2U47_13715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_13725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_13735 PF10952 Protein of unknown function (DUF2753) C2U47_13740 PF00378 Enoyl-CoA hydratase/isomerase C2U47_13755 PF00106 short chain dehydrogenase C2U47_13760 PF00929 Exonuclease C2U47_13765 PF04073 Aminoacyl-tRNA editing domain C2U47_13765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U47_13765 PF03129 Anticodon binding domain C2U47_13770 PF00672 HAMP domain C2U47_13770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_13775 PF01330 RuvA N terminal domain C2U47_13775 PF07499 RuvA, C-terminal domain C2U47_13780 PF05496 Holliday junction DNA helicase RuvB P-loop domain C2U47_13780 PF17864 RuvB AAA lid domain C2U47_13780 PF05491 RuvB C-terminal winged helix domain C2U47_13785 PF01654 Cytochrome bd terminal oxidase subunit I C2U47_13790 PF02322 Cytochrome bd terminal oxidase subunit II C2U47_13795 PF08173 Membrane bound YbgT-like protein C2U47_13800 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C2U47_13805 PF03061 Thioesterase superfamily C2U47_13810 PF01618 MotA/TolQ/ExbB proton channel family C2U47_13815 PF02472 Biopolymer transport protein ExbD/TolR C2U47_13825 PF04052 TolB amino-terminal domain C2U47_13825 PF07676 WD40-like Beta Propeller Repeat C2U47_13830 PF00691 OmpA family C2U47_13835 PF16331 TolA binding protein trimerisation C2U47_13835 PF13174 Tetratricopeptide repeat C2U47_13910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_13910 PF00672 HAMP domain C2U47_13915 PF02445 Quinolinate synthetase A protein C2U47_13920 PF01263 Aldose 1-epimerase C2U47_13925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U47_13925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U47_13930 PF02446 4-alpha-glucanotransferase C2U47_13935 PF00128 Alpha amylase, catalytic domain C2U47_13935 PF02806 Alpha amylase, C-terminal all-beta domain C2U47_13935 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U47_13940 PF00128 Alpha amylase, catalytic domain C2U47_13940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C2U47_13945 PF01641 SelR domain C2U47_13960 PF00293 NUDIX domain C2U47_13965 PF00107 Zinc-binding dehydrogenase C2U47_13965 PF16884 N-terminal domain of oxidoreductase C2U47_13970 PF01047 MarR family C2U47_13985 PF01037 Lrp/AsnC ligand binding domain C2U47_13995 PF07690 Major Facilitator Superfamily C2U47_14015 PF00209 Sodium:neurotransmitter symporter family C2U47_14020 PF00209 Sodium:neurotransmitter symporter family C2U47_14035 PF00392 Bacterial regulatory proteins, gntR family C2U47_14035 PF00155 Aminotransferase class I and II C2U47_14050 PF01177 Asp/Glu/Hydantoin racemase C2U47_14060 PF00501 AMP-binding enzyme C2U47_14070 PF00583 Acetyltransferase (GNAT) family C2U47_14080 PF12592 Protein of unknown function (DUF3763) C2U47_14080 PF07728 AAA domain (dynein-related subfamily) C2U47_14080 PF17868 AAA lid domain C2U47_14090 PF00990 Diguanylate cyclase, GGDEF domain C2U47_14090 PF00563 EAL domain C2U47_14090 PF08448 PAS fold C2U47_14095 PF00072 Response regulator receiver domain C2U47_14095 PF00990 Diguanylate cyclase, GGDEF domain C2U47_14100 PF16658 Class II release factor RF3, C-terminal domain C2U47_14100 PF00009 Elongation factor Tu GTP binding domain C2U47_14100 PF03144 Elongation factor Tu domain 2 C2U47_14110 PF00583 Acetyltransferase (GNAT) family C2U47_14115 PF12804 MobA-like NTP transferase domain C2U47_14115 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_14120 PF00583 Acetyltransferase (GNAT) family C2U47_14125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U47_14135 PF04480 Protein of unknown function (DUF559) C2U47_14140 PF03466 LysR substrate binding domain C2U47_14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_14145 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2U47_14150 PF01425 Amidase C2U47_14185 PF02311 AraC-like ligand binding domain C2U47_14185 PF12833 Helix-turn-helix domain C2U47_14190 PF00175 Oxidoreductase NAD-binding domain C2U47_14190 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U47_14190 PF00970 Oxidoreductase FAD-binding domain C2U47_14195 PF00271 Helicase conserved C-terminal domain C2U47_14195 PF00270 DEAD/DEAH box helicase C2U47_14200 PF00990 Diguanylate cyclase, GGDEF domain C2U47_14215 PF03783 Curli production assembly/transport component CsgG C2U47_14235 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C2U47_14245 PF02687 FtsX-like permease family C2U47_14245 PF12704 MacB-like periplasmic core domain C2U47_14245 PF00005 ABC transporter C2U47_14250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_14255 PF00072 Response regulator receiver domain C2U47_14255 PF00486 Transcriptional regulatory protein, C terminal C2U47_14260 PF00512 His Kinase A (phospho-acceptor) domain C2U47_14260 PF00672 HAMP domain C2U47_14260 PF16527 Two-component sensor protein CpxA, periplasmic domain C2U47_14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_14280 PF00445 Ribonuclease T2 family C2U47_14285 PF03060 Nitronate monooxygenase C2U47_14310 PF01810 LysE type translocator C2U47_14315 PF02954 Bacterial regulatory protein, Fis family C2U47_14320 PF01207 Dihydrouridine synthase (Dus) C2U47_14330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_14360 PF00072 Response regulator receiver domain C2U47_14365 PF00854 POT family C2U47_14370 PF00483 Nucleotidyl transferase C2U47_14380 PF00459 Inositol monophosphatase family C2U47_14385 PF03795 YCII-related domain C2U47_14390 PF04279 Intracellular septation protein A C2U47_14395 PF00282 Pyridoxal-dependent decarboxylase conserved domain C2U47_14400 PF03006 Haemolysin-III related C2U47_14405 PF06826 Predicted Permease Membrane Region C2U47_14405 PF02080 TrkA-C domain C2U47_14425 PF07690 Major Facilitator Superfamily C2U47_14430 PF03466 LysR substrate binding domain C2U47_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_14435 PF04151 Bacterial pre-peptidase C-terminal domain C2U47_14435 PF02868 Thermolysin metallopeptidase, alpha-helical domain C2U47_14435 PF01447 Thermolysin metallopeptidase, catalytic domain C2U47_14435 PF03413 Peptidase propeptide and YPEB domain C2U47_14435 PF07504 Fungalysin/Thermolysin Propeptide Motif C2U47_14440 PF13302 Acetyltransferase (GNAT) domain C2U47_14445 PF13302 Acetyltransferase (GNAT) domain C2U47_14455 PF04074 YhcH/YjgK/YiaL C2U47_14460 PF00871 Acetokinase family C2U47_14465 PF00924 Mechanosensitive ion channel C2U47_14470 PF03734 L,D-transpeptidase catalytic domain C2U47_14470 PF17969 L,D-transpeptidase C-terminal domain C2U47_14475 PF00474 Sodium:solute symporter family C2U47_14480 PF13006 Insertion element 4 transposase N-terminal C2U47_14480 PF01609 Transposase DDE domain C2U47_14490 PF13411 MerR HTH family regulatory protein C2U47_14500 PF01609 Transposase DDE domain C2U47_14500 PF05598 Transposase domain (DUF772) C2U47_14520 PF02525 Flavodoxin-like fold C2U47_14525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_14525 PF03466 LysR substrate binding domain C2U47_14530 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C2U47_14540 PF12848 ABC transporter C2U47_14540 PF00005 ABC transporter C2U47_14545 PF00478 IMP dehydrogenase / GMP reductase domain C2U47_14545 PF00571 CBS domain C2U47_14550 PF00267 Gram-negative porin C2U47_14555 PF01584 CheW-like domain C2U47_14555 PF00072 Response regulator receiver domain C2U47_14560 PF13472 GDSL-like Lipase/Acylhydrolase family C2U47_14565 PF00005 ABC transporter C2U47_14575 PF08338 Domain of unknown function (DUF1731) C2U47_14575 PF01370 NAD dependent epimerase/dehydratase family C2U47_14580 PF00563 EAL domain C2U47_14580 PF12792 CSS motif domain associated with EAL C2U47_14585 PF00155 Aminotransferase class I and II C2U47_14590 PF04389 Peptidase family M28 C2U47_14590 PF01483 Proprotein convertase P-domain C2U47_14595 PF02390 Putative methyltransferase C2U47_14600 PF04320 Protein with unknown function (DUF469) C2U47_14605 PF04960 Glutaminase C2U47_14610 PF00581 Rhodanese-like domain C2U47_14615 PF06004 Bacterial protein of unknown function (DUF903) C2U47_14620 PF13006 Insertion element 4 transposase N-terminal C2U47_14620 PF01609 Transposase DDE domain C2U47_14625 PF00005 ABC transporter C2U47_14625 PF00664 ABC transporter transmembrane region C2U47_14630 PF00561 alpha/beta hydrolase fold C2U47_14650 PF06877 Regulator of ribonuclease activity B C2U47_14655 PF00563 EAL domain C2U47_14655 PF03707 Bacterial signalling protein N terminal repeat C2U47_14655 PF00990 Diguanylate cyclase, GGDEF domain C2U47_14675 PF09905 DNA-binding protein VF530 C2U47_14680 PF02666 Phosphatidylserine decarboxylase C2U47_14685 PF03193 RsgA GTPase C2U47_14690 PF00929 Exonuclease C2U47_14730 PF00313 'Cold-shock' DNA-binding domain C2U47_14740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_14740 PF00672 HAMP domain C2U47_14745 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U47_14750 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U47_14790 PF14706 Transposase DNA-binding C2U47_14790 PF01609 Transposase DDE domain C2U47_14790 PF02281 Transposase Tn5 dimerisation domain C2U47_14800 PF06483 Chitinase C C2U47_14800 PF00704 Glycosyl hydrolases family 18 C2U47_14815 PF02472 Biopolymer transport protein ExbD/TolR C2U47_14820 PF01618 MotA/TolQ/ExbB proton channel family C2U47_14825 PF01618 MotA/TolQ/ExbB proton channel family C2U47_14835 PF00593 TonB dependent receptor C2U47_14835 PF07715 TonB-dependent Receptor Plug Domain C2U47_14840 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_14845 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U47_14845 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_14850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_14855 PF00005 ABC transporter C2U47_14855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U47_14860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U47_14860 PF00005 ABC transporter C2U47_14870 PF01546 Peptidase family M20/M25/M40 C2U47_14870 PF07687 Peptidase dimerisation domain C2U47_14880 PF00156 Phosphoribosyl transferase domain C2U47_14890 PF07417 Sigma factor-binding transcriptional regulator Crl C2U47_14895 PF00696 Amino acid kinase family C2U47_14895 PF01472 PUA domain C2U47_14900 PF00171 Aldehyde dehydrogenase family C2U47_14910 PF00582 Universal stress protein family C2U47_14925 PF00384 Molybdopterin oxidoreductase C2U47_14925 PF01568 Molydopterin dinucleotide binding domain C2U47_14925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U47_14925 PF04324 BFD-like [2Fe-2S] binding domain C2U47_14930 PF10414 Sirohaem synthase dimerisation region C2U47_14930 PF14824 Sirohaem biosynthesis protein central C2U47_14930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2U47_14945 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_14950 PF00005 ABC transporter C2U47_14955 PF18267 Rubredoxin NAD+ reductase C-terminal domain C2U47_14955 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_14955 PF04324 BFD-like [2Fe-2S] binding domain C2U47_14955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U47_14955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U47_14955 PF13806 Rieske-like [2Fe-2S] domain C2U47_14960 PF04324 BFD-like [2Fe-2S] binding domain C2U47_14960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U47_14960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U47_14960 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_14960 PF18267 Rubredoxin NAD+ reductase C-terminal domain C2U47_14960 PF13806 Rieske-like [2Fe-2S] domain C2U47_14965 PF00294 pfkB family carbohydrate kinase C2U47_14970 PF04227 Indigoidine synthase A like protein C2U47_14975 PF00194 Eukaryotic-type carbonic anhydrase C2U47_14990 PF00994 Probable molybdopterin binding domain C2U47_15000 PF06738 Putative threonine/serine exporter C2U47_15005 PF12821 Threonine/Serine exporter, ThrE C2U47_15010 PF00186 Dihydrofolate reductase C2U47_15015 PF00571 CBS domain C2U47_15015 PF00005 ABC transporter C2U47_15020 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_15025 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C2U47_15030 PF01507 Phosphoadenosine phosphosulfate reductase family C2U47_15035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C2U47_15035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C2U47_15040 PF00667 FAD binding domain C2U47_15040 PF00258 Flavodoxin C2U47_15040 PF00175 Oxidoreductase NAD-binding domain C2U47_15045 PF02567 Phenazine biosynthesis-like protein C2U47_15050 PF00152 tRNA synthetases class II (D, K and N) C2U47_15050 PF01336 OB-fold nucleic acid binding domain C2U47_15060 PF00672 HAMP domain C2U47_15060 PF02743 Cache domain C2U47_15060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_15065 PF03616 Sodium/glutamate symporter C2U47_15070 PF00710 Asparaginase, N-terminal C2U47_15070 PF17763 Glutaminase/Asparaginase C-terminal domain C2U47_15075 PF07023 Protein of unknown function (DUF1315) C2U47_15080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2U47_15080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U47_15095 PF01343 Peptidase family S49 C2U47_15100 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_15100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C2U47_15105 PF00881 Nitroreductase family C2U47_15115 PF12464 Maltose acetyltransferase C2U47_15115 PF00132 Bacterial transferase hexapeptide (six repeats) C2U47_15125 PF08240 Alcohol dehydrogenase GroES-like domain C2U47_15125 PF00107 Zinc-binding dehydrogenase C2U47_15130 PF03466 LysR substrate binding domain C2U47_15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_15135 PF00367 phosphotransferase system, EIIB C2U47_15135 PF02378 Phosphotransferase system, EIIC C2U47_15135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U47_15140 PF00474 Sodium:solute symporter family C2U47_15145 PF06196 Protein of unknown function (DUF997) C2U47_15150 PF00289 Biotin carboxylase, N-terminal domain C2U47_15150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U47_15150 PF02785 Biotin carboxylase C-terminal domain C2U47_15155 PF00364 Biotin-requiring enzyme C2U47_15160 PF01220 Dehydroquinase class II C2U47_15165 PF13193 AMP-binding enzyme C-terminal domain C2U47_15165 PF16177 Acetyl-coenzyme A synthetase N-terminus C2U47_15165 PF00501 AMP-binding enzyme C2U47_15170 PF03707 Bacterial signalling protein N terminal repeat C2U47_15170 PF00990 Diguanylate cyclase, GGDEF domain C2U47_15170 PF00563 EAL domain C2U47_15180 PF02613 Nitrate reductase delta subunit C2U47_15195 PF00464 Serine hydroxymethyltransferase C2U47_15205 PF03477 ATP cone domain C2U47_15210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2U47_15210 PF01872 RibD C-terminal domain C2U47_15215 PF00677 Lumazine binding domain C2U47_15220 PF00925 GTP cyclohydrolase II C2U47_15220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C2U47_15225 PF00885 6,7-dimethyl-8-ribityllumazine synthase C2U47_15230 PF01029 NusB family C2U47_15235 PF02769 AIR synthase related protein, C-terminal domain C2U47_15235 PF00586 AIR synthase related protein, N-terminal domain C2U47_15240 PF04608 Phosphatidylglycerophosphatase A C2U47_15245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U47_15245 PF00005 ABC transporter C2U47_15250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_15265 PF02780 Transketolase, C-terminal domain C2U47_15265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C2U47_15265 PF02779 Transketolase, pyrimidine binding domain C2U47_15270 PF00348 Polyprenyl synthetase C2U47_15275 PF02609 Exonuclease VII small subunit C2U47_15280 PF01618 MotA/TolQ/ExbB proton channel family C2U47_15285 PF00691 OmpA family C2U47_15285 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U47_15290 PF03449 Transcription elongation factor, N-terminal C2U47_15290 PF01272 Transcription elongation factor, GreA/GreB, C-term C2U47_15300 PF01985 CRS1 / YhbY (CRM) domain C2U47_15305 PF01728 FtsJ-like methyltransferase C2U47_15310 PF01434 Peptidase family M41 C2U47_15310 PF17862 AAA+ lid domain C2U47_15310 PF00004 ATPase family associated with various cellular activities (AAA) C2U47_15310 PF06480 FtsH Extracellular C2U47_15315 PF00809 Pterin binding enzyme C2U47_15320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2U47_15320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2U47_15320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2U47_15320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2U47_15325 PF00121 Triosephosphate isomerase C2U47_15330 PF03840 Preprotein translocase SecG subunit C2U47_15345 PF17384 RimP C-terminal SH3 domain C2U47_15345 PF02576 RimP N-terminal domain C2U47_15350 PF00575 S1 RNA binding domain C2U47_15350 PF08529 NusA N-terminal domain C2U47_15350 PF13184 NusA-like KH domain C2U47_15355 PF00009 Elongation factor Tu GTP binding domain C2U47_15355 PF08364 Bacterial translation initiation factor IF-2 associated region C2U47_15355 PF11987 Translation-initiation factor 2 C2U47_15355 PF04760 Translation initiation factor IF-2, N-terminal region C2U47_15360 PF02033 Ribosome-binding factor A C2U47_15365 PF09157 Pseudouridine synthase II TruB, C-terminal C2U47_15365 PF16198 tRNA pseudouridylate synthase B C-terminal domain C2U47_15365 PF01509 TruB family pseudouridylate synthase (N terminal domain) C2U47_15370 PF00312 Ribosomal protein S15 C2U47_15375 PF03725 3' exoribonuclease family, domain 2 C2U47_15375 PF01138 3' exoribonuclease family, domain 1 C2U47_15375 PF00575 S1 RNA binding domain C2U47_15375 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C2U47_15375 PF00013 KH domain C2U47_15380 PF07690 Major Facilitator Superfamily C2U47_15385 PF02635 DsrE/DsrF-like family C2U47_15390 PF06476 Protein of unknown function (DUF1090) C2U47_15405 PF12838 4Fe-4S dicluster domain C2U47_15415 PF03734 L,D-transpeptidase catalytic domain C2U47_15415 PF17969 L,D-transpeptidase C-terminal domain C2U47_15425 PF01523 Putative modulator of DNA gyrase C2U47_15435 PF01523 Putative modulator of DNA gyrase C2U47_15440 PF00258 Flavodoxin C2U47_15445 PF00589 Phage integrase family C2U47_15445 PF02899 Phage integrase, N-terminal SAM-like domain C2U47_15450 PF01741 Large-conductance mechanosensitive channel, MscL C2U47_15460 PF17768 RecJ OB domain C2U47_15460 PF02272 DHHA1 domain C2U47_15460 PF01368 DHH family C2U47_15465 PF13411 MerR HTH family regulatory protein C2U47_15480 PF02508 Rnf-Nqr subunit, membrane protein C2U47_15490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C2U47_15490 PF04055 Radical SAM superfamily C2U47_15495 PF03099 Biotin/lipoate A/B protein ligase family C2U47_15500 PF04359 Protein of unknown function (DUF493) C2U47_15505 PF07943 Penicillin-binding protein 5, C-terminal domain C2U47_15505 PF00768 D-alanyl-D-alanine carboxypeptidase C2U47_15510 PF05036 Sporulation related domain C2U47_15510 PF03330 Lytic transglycolase C2U47_15515 PF13406 Transglycosylase SLT domain C2U47_15520 PF01098 Cell cycle protein C2U47_15525 PF00905 Penicillin binding protein transpeptidase domain C2U47_15525 PF03717 Penicillin-binding Protein dimerisation domain C2U47_15530 PF02590 Predicted SPOUT methyltransferase C2U47_15540 PF01467 Cytidylyltransferase-like C2U47_15555 PF08264 Anticodon-binding domain of tRNA C2U47_15555 PF13603 Leucyl-tRNA synthetase, Domain 2 C2U47_15555 PF00133 tRNA synthetases class I (I, L, M and V) C2U47_15560 PF07295 Zinc-ribbon containing domain C2U47_15565 PF00795 Carbon-nitrogen hydrolase C2U47_15570 PF03471 Transporter associated domain C2U47_15570 PF00571 CBS domain C2U47_15575 PF02130 Uncharacterized protein family UPF0054 C2U47_15580 PF02562 PhoH-like protein C2U47_15585 PF04055 Radical SAM superfamily C2U47_15585 PF01938 TRAM domain C2U47_15585 PF00919 Uncharacterized protein family UPF0004 C2U47_15590 PF01494 FAD binding domain C2U47_15595 PF00857 Isochorismatase family C2U47_15600 PF03466 LysR substrate binding domain C2U47_15600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_15610 PF13419 Haloacid dehalogenase-like hydrolase C2U47_15615 PF00990 Diguanylate cyclase, GGDEF domain C2U47_15615 PF17151 Periplasmic sensor domain C2U47_15625 PF00990 Diguanylate cyclase, GGDEF domain C2U47_15625 PF17158 Membrane-associated sensor, integral membrane domain C2U47_15635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2U47_15635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2U47_15645 PF14226 non-haem dioxygenase in morphine synthesis N-terminal C2U47_15645 PF03171 2OG-Fe(II) oxygenase superfamily C2U47_15650 PF03180 NLPA lipoprotein C2U47_15655 PF09383 NIL domain C2U47_15655 PF00005 ABC transporter C2U47_15660 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_15665 PF01132 Elongation factor P (EF-P) OB domain C2U47_15665 PF08207 Elongation factor P (EF-P) KOW-like domain C2U47_15665 PF09285 Elongation factor P, C-terminal C2U47_15675 PF00478 IMP dehydrogenase / GMP reductase domain C2U47_15680 PF08443 RimK-like ATP-grasp domain C2U47_15680 PF18030 RimK PreATP-grasp domain C2U47_15685 PF00512 His Kinase A (phospho-acceptor) domain C2U47_15685 PF08521 Two-component sensor kinase N-terminal C2U47_15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_15690 PF00486 Transcriptional regulatory protein, C terminal C2U47_15690 PF00072 Response regulator receiver domain C2U47_15700 PF00106 short chain dehydrogenase C2U47_15710 PF00501 AMP-binding enzyme C2U47_15725 PF06224 Winged helix DNA-binding domain C2U47_15740 PF02313 Fumarate reductase subunit D C2U47_15745 PF02300 Fumarate reductase subunit C C2U47_15750 PF13183 4Fe-4S dicluster domain C2U47_15750 PF13085 2Fe-2S iron-sulfur cluster binding domain C2U47_15755 PF02910 Fumarate reductase flavoprotein C-term C2U47_15755 PF00890 FAD binding domain C2U47_15760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_15760 PF00672 HAMP domain C2U47_15760 PF02743 Cache domain C2U47_15765 PF03009 Glycerophosphoryl diester phosphodiesterase family C2U47_15770 PF00924 Mechanosensitive ion channel C2U47_15770 PF12794 Mechanosensitive ion channel inner membrane domain 1 C2U47_15770 PF12795 Mechanosensitive ion channel porin domain C2U47_15795 PF03466 LysR substrate binding domain C2U47_15795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_15810 PF03466 LysR substrate binding domain C2U47_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_15815 PF00912 Transglycosylase C2U47_15815 PF17092 Penicillin-binding protein OB-like domain C2U47_15815 PF00905 Penicillin binding protein transpeptidase domain C2U47_15840 PF11741 AMIN domain C2U47_15840 PF07660 Secretin and TonB N terminus short domain C2U47_15840 PF03958 Bacterial type II/III secretion system short domain C2U47_15840 PF00263 Bacterial type II and III secretion system protein C2U47_15845 PF01202 Shikimate kinase C2U47_15850 PF01761 3-dehydroquinate synthase C2U47_15855 PF05036 Sporulation related domain C2U47_15860 PF02086 D12 class N6 adenine-specific DNA methyltransferase C2U47_15865 PF00834 Ribulose-phosphate 3 epimerase family C2U47_15870 PF13419 Haloacid dehalogenase-like hydrolase C2U47_15875 PF00579 tRNA synthetases class I (W and Y) C2U47_15885 PF00117 Glutamine amidotransferase class-I C2U47_15890 PF00202 Aminotransferase class-III C2U47_15895 PF04958 Arginine N-succinyltransferase beta subunit C2U47_15900 PF00171 Aldehyde dehydrogenase family C2U47_15915 PF13419 Haloacid dehalogenase-like hydrolase C2U47_15930 PF07859 alpha/beta hydrolase fold C2U47_15940 PF02080 TrkA-C domain C2U47_15940 PF03600 Citrate transporter C2U47_16005 PF01609 Transposase DDE domain C2U47_16025 PF01381 Helix-turn-helix C2U47_16055 PF02796 Helix-turn-helix domain of resolvase C2U47_16055 PF00239 Resolvase, N terminal domain C2U47_16090 PF00239 Resolvase, N terminal domain C2U47_16090 PF02796 Helix-turn-helix domain of resolvase C2U47_16095 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ C2U47_16110 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C2U47_16125 PF01625 Peptide methionine sulfoxide reductase C2U47_16135 PF03466 LysR substrate binding domain C2U47_16135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_16140 PF01641 SelR domain C2U47_16145 PF01625 Peptide methionine sulfoxide reductase C2U47_16150 PF00043 Glutathione S-transferase, C-terminal domain C2U47_16150 PF02798 Glutathione S-transferase, N-terminal domain C2U47_16200 PF08240 Alcohol dehydrogenase GroES-like domain C2U47_16200 PF00107 Zinc-binding dehydrogenase C2U47_16205 PF01609 Transposase DDE domain C2U47_16215 PF01609 Transposase DDE domain C2U47_16220 PF01526 Tn3 transposase DDE domain C2U47_16220 PF13700 Domain of unknown function (DUF4158) C2U47_16225 PF02796 Helix-turn-helix domain of resolvase C2U47_16225 PF00239 Resolvase, N terminal domain C2U47_16240 PF00005 ABC transporter C2U47_16250 PF13533 Biotin-lipoyl like C2U47_16255 PF00440 Bacterial regulatory proteins, tetR family C2U47_16265 PF12008 Type I restriction and modification enzyme - subunit R C terminal C2U47_16265 PF18766 SWI2/SNF2 ATPase C2U47_16265 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U47_16275 PF00270 DEAD/DEAH box helicase C2U47_16275 PF17191 RecG wedge domain C2U47_16275 PF13749 Putative ATP-dependent DNA helicase recG C-terminal C2U47_16290 PF12161 HsdM N-terminal domain C2U47_16290 PF02384 N-6 DNA Methylase C2U47_16300 PF13356 Arm DNA-binding domain C2U47_16300 PF00589 Phage integrase family C2U47_16305 PF01926 50S ribosome-binding GTPase C2U47_16305 PF06071 Protein of unknown function (DUF933) C2U47_16310 PF01195 Peptidyl-tRNA hydrolase C2U47_16315 PF14572 Phosphoribosyl synthetase-associated domain C2U47_16315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C2U47_16325 PF08544 GHMP kinases C terminal C2U47_16325 PF00288 GHMP kinases N terminal domain C2U47_16330 PF03550 Outer membrane lipoprotein LolB C2U47_16335 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C2U47_16335 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C2U47_16335 PF01488 Shikimate / quinate 5-dehydrogenase C2U47_16340 PF00472 RF-1 domain C2U47_16340 PF03462 PCRF domain C2U47_16345 PF17827 PrmC N-terminal domain C2U47_16345 PF13847 Methyltransferase domain C2U47_16355 PF13369 Transglutaminase-like superfamily C2U47_16360 PF00793 DAHP synthetase I family C2U47_16365 PF00375 Sodium:dicarboxylate symporter family C2U47_16370 PF01228 Glycine radical C2U47_16375 PF03167 Uracil DNA glycosylase superfamily C2U47_16390 PF00923 Transaldolase/Fructose-6-phosphate aldolase C2U47_16395 PF01235 Sodium:alanine symporter family C2U47_16400 PF00144 Beta-lactamase C2U47_16405 PF07690 Major Facilitator Superfamily C2U47_16410 PF03466 LysR substrate binding domain C2U47_16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_16415 PF03652 Holliday junction resolvase C2U47_16420 PF02622 Uncharacterized ACR, COG1678 C2U47_16425 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C2U47_16425 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C2U47_16430 PF04452 RNA methyltransferase C2U47_16435 PF04231 Endonuclease I C2U47_16440 PF17283 SprT-like zinc ribbon domain C2U47_16440 PF10263 SprT-like family C2U47_16445 PF00438 S-adenosylmethionine synthetase, N-terminal domain C2U47_16445 PF02772 S-adenosylmethionine synthetase, central domain C2U47_16445 PF02773 S-adenosylmethionine synthetase, C-terminal domain C2U47_16450 PF02780 Transketolase, C-terminal domain C2U47_16450 PF02779 Transketolase, pyrimidine binding domain C2U47_16450 PF00456 Transketolase, thiamine diphosphate binding domain C2U47_16465 PF01042 Endoribonuclease L-PSP C2U47_16475 PF03702 Anhydro-N-acetylmuramic acid kinase C2U47_16480 PF01551 Peptidase family M23 C2U47_16480 PF01476 LysM domain C2U47_16480 PF08525 Opacity-associated protein A N-terminal motif C2U47_16485 PF00579 tRNA synthetases class I (W and Y) C2U47_16495 PF01161 Phosphatidylethanolamine-binding protein C2U47_16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_16505 PF03466 LysR substrate binding domain C2U47_16515 PF00155 Aminotransferase class I and II C2U47_16520 PF07690 Major Facilitator Superfamily C2U47_16525 PF03466 LysR substrate binding domain C2U47_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_16530 PF00106 short chain dehydrogenase C2U47_16535 PF08496 Peptidase family S49 N-terminal C2U47_16535 PF01343 Peptidase family S49 C2U47_16540 PF04996 Succinylarginine dihydrolase C2U47_16545 PF08272 Topoisomerase I zinc-ribbon-like C2U47_16545 PF01751 Toprim domain C2U47_16545 PF01131 DNA topoisomerase C2U47_16545 PF01396 Topoisomerase DNA binding C4 zinc finger C2U47_16555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_16555 PF08447 PAS fold C2U47_16560 PF00728 Glycosyl hydrolase family 20, catalytic domain C2U47_16560 PF02838 Glycosyl hydrolase family 20, domain 2 C2U47_16565 PF01869 BadF/BadG/BcrA/BcrD ATPase family C2U47_16575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U47_16575 PF00005 ABC transporter C2U47_16585 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_16585 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U47_16590 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_16595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_16600 PF18693 TRAM domain C2U47_16600 PF00919 Uncharacterized protein family UPF0004 C2U47_16600 PF04055 Radical SAM superfamily C2U47_16620 PF13592 Winged helix-turn helix C2U47_16620 PF13358 DDE superfamily endonuclease C2U47_16640 PF00816 H-NS histone family C2U47_16660 PF00072 Response regulator receiver domain C2U47_16660 PF00486 Transcriptional regulatory protein, C terminal C2U47_16665 PF00672 HAMP domain C2U47_16665 PF00512 His Kinase A (phospho-acceptor) domain C2U47_16665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_16685 PF05275 Copper resistance protein B precursor (CopB) C2U47_16690 PF07731 Multicopper oxidase C2U47_16690 PF00394 Multicopper oxidase C2U47_16690 PF07732 Multicopper oxidase C2U47_16705 PF05598 Transposase domain (DUF772) C2U47_16705 PF01609 Transposase DDE domain C2U47_16715 PF01609 Transposase DDE domain C2U47_16725 PF01740 STAS domain C2U47_16725 PF00916 Sulfate permease family C2U47_16740 PF01695 IstB-like ATP binding protein C2U47_16745 PF00665 Integrase core domain C2U47_16780 PF01695 IstB-like ATP binding protein C2U47_16800 PF13592 Winged helix-turn helix C2U47_16800 PF13358 DDE superfamily endonuclease C2U47_16820 PF11867 Domain of unknown function (DUF3387) C2U47_16820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2U47_16820 PF18766 SWI2/SNF2 ATPase C2U47_16830 PF01420 Type I restriction modification DNA specificity domain C2U47_16835 PF12161 HsdM N-terminal domain C2U47_16835 PF02384 N-6 DNA Methylase C2U47_16855 PF05598 Transposase domain (DUF772) C2U47_16855 PF01609 Transposase DDE domain C2U47_16870 PF13737 Transposase DDE domain C2U47_16875 PF00717 Peptidase S24-like C2U47_16880 PF13438 Domain of unknown function (DUF4113) C2U47_16880 PF00817 impB/mucB/samB family C2U47_16880 PF11799 impB/mucB/samB family C-terminal domain C2U47_16890 PF02481 DNA recombination-mediator protein A C2U47_16890 PF17782 DprA winged helix domain C2U47_16895 PF00270 DEAD/DEAH box helicase C2U47_16895 PF00271 Helicase conserved C-terminal domain C2U47_16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_16920 PF00672 HAMP domain C2U47_16925 PF01609 Transposase DDE domain C2U47_16945 PF05598 Transposase domain (DUF772) C2U47_16945 PF01609 Transposase DDE domain C2U47_16965 PF05231 MASE1 C2U47_16965 PF00990 Diguanylate cyclase, GGDEF domain C2U47_16965 PF08447 PAS fold C2U47_16965 PF08448 PAS fold C2U47_16965 PF13426 PAS domain C2U47_16965 PF00563 EAL domain C2U47_16990 PF00072 Response regulator receiver domain C2U47_16995 PF01022 Bacterial regulatory protein, arsR family C2U47_17000 PF01758 Sodium Bile acid symporter family C2U47_17005 PF03960 ArsC family C2U47_17015 PF02049 Flagellar hook-basal body complex protein FliE C2U47_17020 PF08345 Flagellar M-ring protein C-terminal C2U47_17020 PF01514 Secretory protein of YscJ/FliF family C2U47_17025 PF14842 FliG N-terminal domain C2U47_17025 PF14841 FliG middle domain C2U47_17025 PF01706 FliG C-terminal domain C2U47_17035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2U47_17035 PF18269 T3SS EscN ATPase C-terminal domain C2U47_17055 PF02154 Flagellar motor switch protein FliM C2U47_17055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U47_17060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2U47_17065 PF04347 Flagellar biosynthesis protein, FliO C2U47_17070 PF00813 FliP family C2U47_17075 PF01313 Bacterial export proteins, family 3 C2U47_17080 PF01311 Bacterial export proteins, family 1 C2U47_17085 PF01312 FlhB HrpN YscU SpaS Family C2U47_17090 PF00771 FHIPEP family C2U47_17095 PF00448 SRP54-type protein, GTPase domain C2U47_17100 PF10609 NUBPL iron-transfer P-loop NTPase C2U47_17105 PF04545 Sigma-70, region 4 C2U47_17105 PF04539 Sigma-70 region 3 C2U47_17105 PF04542 Sigma-70 region 2 C2U47_17110 PF00072 Response regulator receiver domain C2U47_17115 PF04344 Chemotaxis phosphatase, CheZ C2U47_17120 PF07194 P2 response regulator binding domain C2U47_17120 PF01584 CheW-like domain C2U47_17120 PF02895 Signal transducing histidine kinase, homodimeric domain C2U47_17120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_17120 PF01627 Hpt domain C2U47_17125 PF00072 Response regulator receiver domain C2U47_17125 PF01339 CheB methylesterase C2U47_17130 PF01618 MotA/TolQ/ExbB proton channel family C2U47_17135 PF00691 OmpA family C2U47_17135 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2U47_17140 PF13614 AAA domain C2U47_17150 PF01584 CheW-like domain C2U47_17160 PF00005 ABC transporter C2U47_17165 PF03379 CcmB protein C2U47_17170 PF01578 Cytochrome C assembly protein C2U47_17175 PF04995 Heme exporter protein D (CcmD) C2U47_17180 PF03100 CcmE C2U47_17185 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C2U47_17185 PF01578 Cytochrome C assembly protein C2U47_17190 PF08534 Redoxin C2U47_17195 PF03918 Cytochrome C biogenesis protein C2U47_17205 PF04333 MlaA lipoprotein C2U47_17210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2U47_17210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2U47_17215 PF00462 Glutaredoxin C2U47_17220 PF01189 16S rRNA methyltransferase RsmB/F C2U47_17220 PF01029 NusB family C2U47_17235 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C2U47_17235 PF01243 Pyridoxamine 5'-phosphate oxidase C2U47_17240 PF03466 LysR substrate binding domain C2U47_17240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_17245 PF01546 Peptidase family M20/M25/M40 C2U47_17265 PF13508 Acetyltransferase (GNAT) domain C2U47_17280 PF01081 KDPG and KHG aldolase C2U47_17285 PF00294 pfkB family carbohydrate kinase C2U47_17290 PF10688 Bacterial inner membrane protein C2U47_17300 PF01232 Mannitol dehydrogenase Rossmann domain C2U47_17300 PF08125 Mannitol dehydrogenase C-terminal domain C2U47_17305 PF02614 Glucuronate isomerase C2U47_17310 PF03480 Bacterial extracellular solute-binding protein, family 7 C2U47_17320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C2U47_17325 PF00392 Bacterial regulatory proteins, gntR family C2U47_17325 PF07729 FCD domain C2U47_17350 PF13358 DDE superfamily endonuclease C2U47_17350 PF13592 Winged helix-turn helix C2U47_17360 PF05598 Transposase domain (DUF772) C2U47_17360 PF01609 Transposase DDE domain C2U47_17395 PF00816 H-NS histone family C2U47_17415 PF08007 Cupin superfamily protein C2U47_17420 PF05711 Macrocin-O-methyltransferase (TylF) C2U47_17430 PF13358 DDE superfamily endonuclease C2U47_17430 PF13592 Winged helix-turn helix C2U47_17440 PF12462 DNA helicase IV / RNA helicase N terminal C2U47_17440 PF13361 UvrD-like helicase C-terminal domain C2U47_17440 PF00580 UvrD/REP helicase N-terminal domain C2U47_17445 PF13592 Winged helix-turn helix C2U47_17445 PF13358 DDE superfamily endonuclease C2U47_17470 PF01668 SmpB protein C2U47_17475 PF03364 Polyketide cyclase / dehydrase and lipid transport C2U47_17485 PF13460 NAD(P)H-binding C2U47_17490 PF04355 SmpA / OmlA family C2U47_17495 PF00465 Iron-containing alcohol dehydrogenase C2U47_17500 PF01048 Phosphorylase superfamily C2U47_17505 PF00849 RNA pseudouridylate synthase C2U47_17510 PF01156 Inosine-uridine preferring nucleoside hydrolase C2U47_17525 PF07509 Protein of unknown function (DUF1523) C2U47_17530 PF00672 HAMP domain C2U47_17530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_17535 PF01810 LysE type translocator C2U47_17545 PF03471 Transporter associated domain C2U47_17545 PF02080 TrkA-C domain C2U47_17545 PF00999 Sodium/hydrogen exchanger family C2U47_17555 PF02557 D-alanyl-D-alanine carboxypeptidase C2U47_17560 PF07687 Peptidase dimerisation domain C2U47_17560 PF01546 Peptidase family M20/M25/M40 C2U47_17565 PF03960 ArsC family C2U47_17575 PF03606 C4-dicarboxylate anaerobic carrier C2U47_17580 PF07687 Peptidase dimerisation domain C2U47_17580 PF01546 Peptidase family M20/M25/M40 C2U47_17590 PF03605 Anaerobic c4-dicarboxylate membrane transporter C2U47_17595 PF01336 OB-fold nucleic acid binding domain C2U47_17595 PF00152 tRNA synthetases class II (D, K and N) C2U47_17615 PF04055 Radical SAM superfamily C2U47_17615 PF06968 Biotin and Thiamin Synthesis associated domain C2U47_17620 PF00155 Aminotransferase class I and II C2U47_17625 PF12697 Alpha/beta hydrolase family C2U47_17625 PF08241 Methyltransferase domain C2U47_17635 PF01435 Peptidase family M48 C2U47_17645 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_17645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C2U47_17645 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2U47_17650 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C2U47_17650 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C2U47_17650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2U47_17650 PF10371 Domain of unknown function C2U47_17650 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C2U47_17655 PF04325 Protein of unknown function (DUF465) C2U47_17665 PF01554 MatE C2U47_17685 PF00291 Pyridoxal-phosphate dependent enzyme C2U47_17690 PF00465 Iron-containing alcohol dehydrogenase C2U47_17700 PF00440 Bacterial regulatory proteins, tetR family C2U47_17700 PF08359 YsiA-like protein, C-terminal region C2U47_17705 PF00171 Aldehyde dehydrogenase family C2U47_17715 PF00877 NlpC/P60 family C2U47_17720 PF03466 LysR substrate binding domain C2U47_17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_17740 PF08003 Protein of unknown function (DUF1698) C2U47_17745 PF13649 Methyltransferase domain C2U47_17750 PF01904 Protein of unknown function DUF72 C2U47_17760 PF01336 OB-fold nucleic acid binding domain C2U47_17760 PF00152 tRNA synthetases class II (D, K and N) C2U47_17760 PF02938 GAD domain C2U47_17765 PF01709 Transcriptional regulator C2U47_17770 PF08019 Phosphoethanolamine transferase EptA/EptB C2U47_17770 PF00884 Sulfatase C2U47_17775 PF00480 ROK family C2U47_17775 PF01047 MarR family C2U47_17780 PF01979 Amidohydrolase family C2U47_17785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C2U47_17790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U47_17790 PF02378 Phosphotransferase system, EIIC C2U47_17790 PF00367 phosphotransferase system, EIIB C2U47_17795 PF00728 Glycosyl hydrolase family 20, catalytic domain C2U47_17795 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C2U47_17795 PF02838 Glycosyl hydrolase family 20, domain 2 C2U47_17795 PF03173 Putative carbohydrate binding domain C2U47_17800 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2U47_17800 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C2U47_17805 PF01475 Ferric uptake regulator family C2U47_17815 PF00258 Flavodoxin C2U47_17820 PF01402 Ribbon-helix-helix protein, copG family C2U47_17830 PF12697 Alpha/beta hydrolase family C2U47_17835 PF03925 SeqA protein C-terminal domain C2U47_17835 PF17206 SeqA protein N-terminal domain C2U47_17840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2U47_17840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2U47_17840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2U47_17840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2U47_17850 PF01047 MarR family C2U47_17855 PF13406 Transglycosylase SLT domain C2U47_17860 PF01066 CDP-alcohol phosphatidyltransferase C2U47_17875 PF13416 Bacterial extracellular solute-binding protein C2U47_17880 PF00403 Heavy-metal-associated domain C2U47_17880 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_17880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U47_17885 PF02627 Carboxymuconolactone decarboxylase family C2U47_17900 PF01609 Transposase DDE domain C2U47_17900 PF05598 Transposase domain (DUF772) C2U47_17905 PF01609 Transposase DDE domain C2U47_17905 PF05598 Transposase domain (DUF772) C2U47_17920 PF07244 Surface antigen variable number repeat C2U47_17920 PF17243 POTRA domain TamA domain 1 C2U47_17920 PF01103 Surface antigen C2U47_17925 PF04357 TamB, inner membrane protein subunit of TAM complex C2U47_17945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C2U47_17955 PF14718 Soluble lytic murein transglycosylase L domain C2U47_17955 PF01464 Transglycosylase SLT domain C2U47_17960 PF00356 Bacterial regulatory proteins, lacI family C2U47_17970 PF03061 Thioesterase superfamily C2U47_17980 PF03372 Endonuclease/Exonuclease/phosphatase family C2U47_17985 PF01476 LysM domain C2U47_17985 PF01464 Transglycosylase SLT domain C2U47_17990 PF00753 Metallo-beta-lactamase superfamily C2U47_17990 PF16123 Hydroxyacylglutathione hydrolase C-terminus C2U47_17995 PF08241 Methyltransferase domain C2U47_18000 PF00075 RNase H C2U47_18005 PF00929 Exonuclease C2U47_18020 PF02770 Acyl-CoA dehydrogenase, middle domain C2U47_18020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U47_18020 PF09317 Domain of unknown function (DUF1974) C2U47_18020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U47_18025 PF13580 SIS domain C2U47_18030 PF13230 Glutamine amidotransferases class-II C2U47_18040 PF01933 Uncharacterised protein family UPF0052 C2U47_18050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_18050 PF00512 His Kinase A (phospho-acceptor) domain C2U47_18050 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U47_18050 PF00072 Response regulator receiver domain C2U47_18065 PF00072 Response regulator receiver domain C2U47_18065 PF00196 Bacterial regulatory proteins, luxR family C2U47_18070 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C2U47_18070 PF07730 Histidine kinase C2U47_18070 PF00672 HAMP domain C2U47_18070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_18075 PF04055 Radical SAM superfamily C2U47_18075 PF06463 Molybdenum Cofactor Synthesis C C2U47_18080 PF12800 4Fe-4S binding domain C2U47_18080 PF00037 4Fe-4S binding domain C2U47_18080 PF13187 4Fe-4S dicluster domain C2U47_18090 PF00384 Molybdopterin oxidoreductase C2U47_18090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2U47_18090 PF10518 TAT (twin-arginine translocation) pathway signal sequence C2U47_18090 PF01568 Molydopterin dinucleotide binding domain C2U47_18095 PF12838 4Fe-4S dicluster domain C2U47_18095 PF12800 4Fe-4S binding domain C2U47_18105 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C2U47_18110 PF03264 NapC/NirT cytochrome c family, N-terminal region C2U47_18115 PF00994 Probable molybdopterin binding domain C2U47_18120 PF01967 MoaC family C2U47_18125 PF02597 ThiS family C2U47_18130 PF02391 MoaE protein C2U47_18140 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_18145 PF03459 TOBE domain C2U47_18145 PF00005 ABC transporter C2U47_18150 PF12697 Alpha/beta hydrolase family C2U47_18155 PF00899 ThiF family C2U47_18160 PF00994 Probable molybdopterin binding domain C2U47_18160 PF03453 MoeA N-terminal region (domain I and II) C2U47_18160 PF03454 MoeA C-terminal region (domain IV) C2U47_18165 PF01227 GTP cyclohydrolase I C2U47_18170 PF00672 HAMP domain C2U47_18170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_18170 PF17200 Single Cache domain 2 C2U47_18175 PF01268 Formate--tetrahydrofolate ligase C2U47_18185 PF03466 LysR substrate binding domain C2U47_18185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_18190 PF04264 YceI-like domain C2U47_18215 PF07687 Peptidase dimerisation domain C2U47_18215 PF01546 Peptidase family M20/M25/M40 C2U47_18225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2U47_18225 PF17810 Arginine decarboxylase helical bundle domain C2U47_18225 PF17944 Arginine decarboxylase C-terminal helical extension C2U47_18240 PF00990 Diguanylate cyclase, GGDEF domain C2U47_18240 PF00563 EAL domain C2U47_18240 PF03707 Bacterial signalling protein N terminal repeat C2U47_18245 PF00300 Histidine phosphatase superfamily (branch 1) C2U47_18250 PF03852 DNA mismatch endonuclease Vsr C2U47_18255 PF00145 C-5 cytosine-specific DNA methylase C2U47_18260 PF08676 MutL C terminal dimerisation domain C2U47_18260 PF01119 DNA mismatch repair protein, C-terminal domain C2U47_18280 PF01609 Transposase DDE domain C2U47_18295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C2U47_18295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2U47_18300 PF01479 S4 domain C2U47_18300 PF00849 RNA pseudouridylate synthase C2U47_18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_18315 PF03466 LysR substrate binding domain C2U47_18335 PF04391 Protein of unknown function (DUF533) C2U47_18345 PF00155 Aminotransferase class I and II C2U47_18345 PF00392 Bacterial regulatory proteins, gntR family C2U47_18350 PF01654 Cytochrome bd terminal oxidase subunit I C2U47_18355 PF02322 Cytochrome bd terminal oxidase subunit II C2U47_18365 PF07690 Major Facilitator Superfamily C2U47_18370 PF00248 Aldo/keto reductase family C2U47_18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_18390 PF03466 LysR substrate binding domain C2U47_18395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C2U47_18395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C2U47_18400 PF00230 Major intrinsic protein C2U47_18405 PF07690 Major Facilitator Superfamily C2U47_18410 PF00455 DeoR C terminal sensor domain C2U47_18410 PF08220 DeoR-like helix-turn-helix domain C2U47_18415 PF01266 FAD dependent oxidoreductase C2U47_18415 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C2U47_18420 PF03009 Glycerophosphoryl diester phosphodiesterase family C2U47_18425 PF00793 DAHP synthetase I family C2U47_18430 PF01817 Chorismate mutase type II C2U47_18430 PF02153 Prephenate dehydrogenase C2U47_18435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_18435 PF03466 LysR substrate binding domain C2U47_18440 PF04219 Protein of unknown function, DUF C2U47_18445 PF03974 Ecotin C2U47_18465 PF00326 Prolyl oligopeptidase family C2U47_18465 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C2U47_18470 PF07715 TonB-dependent Receptor Plug Domain C2U47_18470 PF00593 TonB dependent receptor C2U47_18475 PF00884 Sulfatase C2U47_18475 PF11893 Domain of unknown function (DUF3413) C2U47_18480 PF07208 Protein of unknown function (DUF1414) C2U47_18485 PF04245 37-kD nucleoid-associated bacterial protein C2U47_18490 PF01547 Bacterial extracellular solute-binding protein C2U47_18495 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_18495 PF14785 Maltose transport system permease protein MalF P2 domain C2U47_18500 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_18505 PF08402 TOBE domain C2U47_18505 PF00005 ABC transporter C2U47_18510 PF03976 Polyphosphate kinase 2 (PPK2) C2U47_18515 PF00561 alpha/beta hydrolase fold C2U47_18520 PF01609 Transposase DDE domain C2U47_18520 PF13006 Insertion element 4 transposase N-terminal C2U47_18530 PF01594 AI-2E family transporter C2U47_18535 PF01206 Sulfurtransferase TusA C2U47_18540 PF01435 Peptidase family M48 C2U47_18540 PF13181 Tetratricopeptide repeat C2U47_18545 PF00578 AhpC/TSA family C2U47_18550 PF03960 ArsC family C2U47_18565 PF12323 Helix-turn-helix domain C2U47_18565 PF01385 Probable transposase C2U47_18565 PF07282 Putative transposase DNA-binding domain C2U47_18575 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_18580 PF01979 Amidohydrolase family C2U47_18585 PF03956 Lysine exporter LysO C2U47_18590 PF00005 ABC transporter C2U47_18595 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_18600 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_18605 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_18615 PF04055 Radical SAM superfamily C2U47_18620 PF00990 Diguanylate cyclase, GGDEF domain C2U47_18620 PF03707 Bacterial signalling protein N terminal repeat C2U47_18620 PF00563 EAL domain C2U47_18625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C2U47_18625 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_18630 PF17962 Bacterial macroglobulin domain 6 C2U47_18630 PF00207 Alpha-2-macroglobulin family C2U47_18630 PF07703 Alpha-2-macroglobulin bait region domain C2U47_18630 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C2U47_18630 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C2U47_18630 PF07678 A-macroglobulin TED domain C2U47_18630 PF01835 MG2 domain C2U47_18630 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C2U47_18630 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C2U47_18635 PF00905 Penicillin binding protein transpeptidase domain C2U47_18635 PF00912 Transglycosylase C2U47_18635 PF06832 Penicillin-Binding Protein C-terminus Family C2U47_18645 PF02926 THUMP domain C2U47_18645 PF02568 Thiamine biosynthesis protein (ThiI) C2U47_18660 PF00700 Bacterial flagellin C-terminal helical region C2U47_18660 PF00669 Bacterial flagellin N-terminal helical region C2U47_18660 PF07196 Flagellin hook IN motif C2U47_18665 PF03646 FlaG protein C2U47_18670 PF07196 Flagellin hook IN motif C2U47_18670 PF02465 Flagellar hook-associated protein 2 N-terminus C2U47_18670 PF07195 Flagellar hook-associated protein 2 C-terminus C2U47_18675 PF02561 Flagellar protein FliS C2U47_18700 PF08666 SAF domain C2U47_18700 PF03102 NeuB family C2U47_18710 PF02348 Cytidylyltransferase C2U47_18745 PF00535 Glycosyl transferase family 2 C2U47_18750 PF03275 UDP-galactopyranose mutase C2U47_18765 PF01209 ubiE/COQ5 methyltransferase family C2U47_18770 PF00534 Glycosyl transferases group 1 C2U47_18795 PF13592 Winged helix-turn helix C2U47_18795 PF13358 DDE superfamily endonuclease C2U47_18800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2U47_18810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2U47_18815 PF02719 Polysaccharide biosynthesis protein C2U47_18820 PF01497 Periplasmic binding protein C2U47_18830 PF01048 Phosphorylase superfamily C2U47_18835 PF02535 ZIP Zinc transporter C2U47_18850 PF12323 Helix-turn-helix domain C2U47_18850 PF01385 Probable transposase C2U47_18850 PF07282 Putative transposase DNA-binding domain C2U47_18860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C2U47_18870 PF02508 Rnf-Nqr subunit, membrane protein C2U47_18875 PF04205 FMN-binding domain C2U47_18880 PF03116 NQR2, RnfD, RnfE family C2U47_18890 PF04060 Putative Fe-S cluster C2U47_18895 PF02508 Rnf-Nqr subunit, membrane protein C2U47_18900 PF07282 Putative transposase DNA-binding domain C2U47_18900 PF01385 Probable transposase C2U47_18900 PF12323 Helix-turn-helix domain C2U47_18905 PF01609 Transposase DDE domain C2U47_18905 PF13808 DDE_Tnp_1-associated C2U47_18910 PF01609 Transposase DDE domain C2U47_18910 PF05598 Transposase domain (DUF772) C2U47_18955 PF12241 Trans-2-enoyl-CoA reductase catalytic region C2U47_18955 PF07055 Enoyl reductase FAD binding domain C2U47_18955 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C2U47_18960 PF03606 C4-dicarboxylate anaerobic carrier C2U47_18965 PF00155 Aminotransferase class I and II C2U47_18975 PF00462 Glutaredoxin C2U47_18985 PF04851 Type III restriction enzyme, res subunit C2U47_18985 PF00271 Helicase conserved C-terminal domain C2U47_18990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2U47_18990 PF00529 HlyD membrane-fusion protein of T1SS C2U47_18995 PF11742 Protein of unknown function (DUF3302) C2U47_19005 PF12323 Helix-turn-helix domain C2U47_19005 PF01385 Probable transposase C2U47_19005 PF07282 Putative transposase DNA-binding domain C2U47_19015 PF02554 Carbon starvation protein CstA C2U47_19020 PF04397 LytTr DNA-binding domain C2U47_19020 PF00072 Response regulator receiver domain C2U47_19035 PF00171 Aldehyde dehydrogenase family C2U47_19035 PF00465 Iron-containing alcohol dehydrogenase C2U47_19040 PF01914 MarC family integral membrane protein C2U47_19045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_19055 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_19055 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U47_19060 PF00005 ABC transporter C2U47_19060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U47_19065 PF00005 ABC transporter C2U47_19065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U47_19070 PF03741 Integral membrane protein TerC family C2U47_19075 PF00842 Alanine racemase, C-terminal domain C2U47_19075 PF01168 Alanine racemase, N-terminal domain C2U47_19085 PF00375 Sodium:dicarboxylate symporter family C2U47_19105 PF01979 Amidohydrolase family C2U47_19115 PF00672 HAMP domain C2U47_19115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_19120 PF01230 HIT domain C2U47_19155 PF02355 Protein export membrane protein C2U47_19155 PF13721 SecD export protein N-terminal TM region C2U47_19155 PF07549 SecD/SecF GG Motif C2U47_19160 PF02355 Protein export membrane protein C2U47_19160 PF07549 SecD/SecF GG Motif C2U47_19165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_19165 PF08447 PAS fold C2U47_19165 PF13426 PAS domain C2U47_19175 PF05661 Protein of unknown function (DUF808) C2U47_19180 PF01432 Peptidase family M3 C2U47_19180 PF08439 Oligopeptidase F C2U47_19185 PF01432 Peptidase family M3 C2U47_19185 PF08439 Oligopeptidase F C2U47_19190 PF05728 Uncharacterised protein family (UPF0227) C2U47_19195 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_19200 PF01906 Putative heavy-metal-binding C2U47_19215 PF00696 Amino acid kinase family C2U47_19215 PF01842 ACT domain C2U47_19220 PF00696 Amino acid kinase family C2U47_19220 PF00583 Acetyltransferase (GNAT) family C2U47_19225 PF01625 Peptide methionine sulfoxide reductase C2U47_19250 PF03466 LysR substrate binding domain C2U47_19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_19255 PF02652 L-lactate permease C2U47_19260 PF02754 Cysteine-rich domain C2U47_19270 PF02589 LUD domain C2U47_19285 PF05598 Transposase domain (DUF772) C2U47_19285 PF01609 Transposase DDE domain C2U47_19305 PF00005 ABC transporter C2U47_19325 PF07690 Major Facilitator Superfamily C2U47_19345 PF01593 Flavin containing amine oxidoreductase C2U47_19350 PF03239 Iron permease FTR1 family C2U47_19380 PF04168 A predicted alpha-helical domain with a conserved ER motif. C2U47_19380 PF14403 Circularly permuted ATP-grasp type 2 C2U47_19385 PF14403 Circularly permuted ATP-grasp type 2 C2U47_19420 PF01740 STAS domain C2U47_19420 PF00916 Sulfate permease family C2U47_19435 PF01168 Alanine racemase, N-terminal domain C2U47_19435 PF00842 Alanine racemase, C-terminal domain C2U47_19440 PF05598 Transposase domain (DUF772) C2U47_19440 PF01609 Transposase DDE domain C2U47_19445 PF13662 Toprim domain C2U47_19445 PF02132 RecR protein C2U47_19455 PF00183 Hsp90 protein C2U47_19455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_19460 PF05191 Adenylate kinase, active site lid C2U47_19465 PF00762 Ferrochelatase C2U47_19470 PF01124 MAPEG family C2U47_19475 PF00294 pfkB family carbohydrate kinase C2U47_19480 PF17200 Single Cache domain 2 C2U47_19480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_19480 PF00672 HAMP domain C2U47_19500 PF00483 Nucleotidyl transferase C2U47_19510 PF07273 Protein of unknown function (DUF1439) C2U47_19515 PF00425 chorismate binding enzyme C2U47_19520 PF13193 AMP-binding enzyme C-terminal domain C2U47_19520 PF00501 AMP-binding enzyme C2U47_19525 PF00857 Isochorismatase family C2U47_19525 PF00550 Phosphopantetheine attachment site C2U47_19530 PF00668 Condensation domain C2U47_19530 PF00975 Thioesterase domain C2U47_19530 PF00501 AMP-binding enzyme C2U47_19530 PF00550 Phosphopantetheine attachment site C2U47_19530 PF13193 AMP-binding enzyme C-terminal domain C2U47_19540 PF00501 AMP-binding enzyme C2U47_19540 PF00550 Phosphopantetheine attachment site C2U47_19540 PF07993 Male sterility protein C2U47_19540 PF00668 Condensation domain C2U47_19540 PF13193 AMP-binding enzyme C-terminal domain C2U47_19550 PF01497 Periplasmic binding protein C2U47_19555 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C2U47_19555 PF01648 4'-phosphopantetheinyl transferase superfamily C2U47_19565 PF01032 FecCD transport family C2U47_19570 PF01032 FecCD transport family C2U47_19575 PF07715 TonB-dependent Receptor Plug Domain C2U47_19575 PF00593 TonB dependent receptor C2U47_19590 PF11143 Protein of unknown function (DUF2919) C2U47_19595 PF01544 CorA-like Mg2+ transporter protein C2U47_19605 PF01012 Electron transfer flavoprotein domain C2U47_19610 PF01012 Electron transfer flavoprotein domain C2U47_19610 PF00766 Electron transfer flavoprotein FAD-binding domain C2U47_19615 PF00266 Aminotransferase class-V C2U47_19620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2U47_19625 PF00793 DAHP synthetase I family C2U47_19630 PF03741 Integral membrane protein TerC family C2U47_19640 PF08891 YfcL protein C2U47_19645 PF00501 AMP-binding enzyme C2U47_19650 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C2U47_19650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2U47_19655 PF04172 LrgB-like family C2U47_19660 PF03788 LrgA family C2U47_19675 PF00929 Exonuclease C2U47_19675 PF08411 Exonuclease C-terminal C2U47_19680 PF00149 Calcineurin-like phosphoesterase C2U47_19695 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2U47_19700 PF00795 Carbon-nitrogen hydrolase C2U47_19705 PF00155 Aminotransferase class I and II C2U47_19710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_19710 PF03466 LysR substrate binding domain C2U47_19715 PF02610 L-arabinose isomerase C2U47_19715 PF11762 L-arabinose isomerase C-terminal domain C2U47_19720 PF00596 Class II Aldolase and Adducin N-terminal domain C2U47_19725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C2U47_19730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U47_19735 PF00005 ABC transporter C2U47_19740 PF02653 Branched-chain amino acid transport system / permease component C2U47_19745 PF02311 AraC-like ligand binding domain C2U47_19745 PF12833 Helix-turn-helix domain C2U47_19750 PF00444 Ribosomal protein L36 C2U47_19755 PF01197 Ribosomal protein L31 C2U47_19770 PF01863 Protein of unknown function DUF45 C2U47_19785 PF03606 C4-dicarboxylate anaerobic carrier C2U47_19795 PF01266 FAD dependent oxidoreductase C2U47_19795 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C2U47_19800 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U47_19800 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U47_19815 PF00285 Citrate synthase, C-terminal domain C2U47_19820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2U47_19825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2U47_19830 PF02910 Fumarate reductase flavoprotein C-term C2U47_19830 PF00890 FAD binding domain C2U47_19835 PF13085 2Fe-2S iron-sulfur cluster binding domain C2U47_19840 PF16078 2-oxoglutarate dehydrogenase N-terminus C2U47_19840 PF16870 2-oxoglutarate dehydrogenase C-terminal C2U47_19840 PF00676 Dehydrogenase E1 component C2U47_19840 PF02779 Transketolase, pyrimidine binding domain C2U47_19845 PF02817 e3 binding domain C2U47_19845 PF00364 Biotin-requiring enzyme C2U47_19845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C2U47_19850 PF08442 ATP-grasp domain C2U47_19850 PF00549 CoA-ligase C2U47_19855 PF02629 CoA binding domain C2U47_19855 PF00549 CoA-ligase C2U47_19875 PF03692 Putative zinc- or iron-chelating domain C2U47_19885 PF02901 Pyruvate formate lyase-like C2U47_19885 PF01228 Glycine radical C2U47_19890 PF01226 Formate/nitrite transporter C2U47_19895 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C2U47_19895 PF18381 YcaO cyclodehydratase C-terminal domain C2U47_19905 PF00893 Small Multidrug Resistance protein C2U47_19910 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2U47_19910 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2U47_19915 PF00313 'Cold-shock' DNA-binding domain C2U47_19920 PF02617 ATP-dependent Clp protease adaptor protein ClpS C2U47_19925 PF10431 C-terminal, D2-small domain, of ClpB protein C2U47_19925 PF07724 AAA domain (Cdc48 subfamily) C2U47_19925 PF17871 AAA lid domain C2U47_19925 PF02861 Clp amino terminal domain, pathogenicity island component C2U47_19925 PF00004 ATPase family associated with various cellular activities (AAA) C2U47_19930 PF01176 Translation initiation factor 1A / IF-1 C2U47_19935 PF04377 Arginine-tRNA-protein transferase, C terminus C2U47_19935 PF04376 Arginine-tRNA-protein transferase, N terminus C2U47_19940 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C2U47_19945 PF05433 Glycine zipper 2TM domain C2U47_19950 PF05230 MASE2 domain C2U47_19950 PF00990 Diguanylate cyclase, GGDEF domain C2U47_19955 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2U47_19960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2U47_19960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2U47_19965 PF01037 Lrp/AsnC ligand binding domain C2U47_19970 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C2U47_19970 PF17854 FtsK alpha domain C2U47_19970 PF09397 Ftsk gamma domain C2U47_19970 PF01580 FtsK/SpoIIIE family C2U47_19975 PF03548 Outer membrane lipoprotein carrier protein LolA C2U47_19980 PF12002 MgsA AAA+ ATPase C terminal C2U47_19980 PF00004 ATPase family associated with various cellular activities (AAA) C2U47_19980 PF16193 AAA C-terminal domain C2U47_19985 PF02403 Seryl-tRNA synthetase N-terminal domain C2U47_19985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U47_19990 PF02674 Colicin V production protein C2U47_19995 PF00156 Phosphoribosyl transferase domain C2U47_20000 PF00232 Glycosyl hydrolase family 1 C2U47_20005 PF00367 phosphotransferase system, EIIB C2U47_20005 PF02378 Phosphotransferase system, EIIC C2U47_20010 PF00356 Bacterial regulatory proteins, lacI family C2U47_20015 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C2U47_20020 PF00005 ABC transporter C2U47_20025 PF00005 ABC transporter C2U47_20025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2U47_20030 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_20030 PF12911 N-terminal TM domain of oligopeptide transport permease C C2U47_20035 PF00528 Binding-protein-dependent transport system inner membrane component C2U47_20040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_20045 PF00158 Sigma-54 interaction domain C2U47_20045 PF02954 Bacterial regulatory protein, Fis family C2U47_20050 PF04012 PspA/IM30 family C2U47_20055 PF06667 Phage shock protein B C2U47_20065 PF04317 YcjX-like family, DUF463 C2U47_20070 PF05128 Domain of unknown function (DUF697) C2U47_20075 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C2U47_20080 PF01329 Pterin 4 alpha carbinolamine dehydratase C2U47_20085 PF18024 Helix-turn-helix domain C2U47_20085 PF00158 Sigma-54 interaction domain C2U47_20090 PF13689 YfiR/HmsC-like C2U47_20095 PF00990 Diguanylate cyclase, GGDEF domain C2U47_20095 PF17152 Periplasmic sensor domain C2U47_20100 PF00691 OmpA family C2U47_20105 PF04055 Radical SAM superfamily C2U47_20110 PF02601 Exonuclease VII, large subunit C2U47_20110 PF13742 OB-fold nucleic acid binding domain C2U47_20130 PF00571 CBS domain C2U47_20130 PF00478 IMP dehydrogenase / GMP reductase domain C2U47_20135 PF00117 Glutamine amidotransferase class-I C2U47_20135 PF00958 GMP synthase C terminal domain C2U47_20135 PF02540 NAD synthase C2U47_20140 PF01609 Transposase DDE domain C2U47_20140 PF05598 Transposase domain (DUF772) C2U47_20150 PF12833 Helix-turn-helix domain C2U47_20150 PF02805 Metal binding domain of Ada C2U47_20150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2U47_20150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2U47_20170 PF01047 MarR family C2U47_20180 PF05724 Thiopurine S-methyltransferase (TPMT) C2U47_20185 PF00675 Insulinase (Peptidase family M16) C2U47_20185 PF16187 Middle or third domain of peptidase_M16 C2U47_20185 PF05193 Peptidase M16 inactive domain C2U47_20190 PF00300 Histidine phosphatase superfamily (branch 1) C2U47_20200 PF00892 EamA-like transporter family C2U47_20205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2U47_20210 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C2U47_20215 PF02559 CarD-like/TRCF domain C2U47_20215 PF03461 TRCF domain C2U47_20215 PF17757 UvrB interaction domain C2U47_20215 PF00270 DEAD/DEAH box helicase C2U47_20215 PF00271 Helicase conserved C-terminal domain C2U47_20225 PF12704 MacB-like periplasmic core domain C2U47_20225 PF02687 FtsX-like permease family C2U47_20230 PF00005 ABC transporter C2U47_20235 PF02687 FtsX-like permease family C2U47_20235 PF12704 MacB-like periplasmic core domain C2U47_20255 PF05698 Bacterial trigger factor protein (TF) C-terminus C2U47_20255 PF05697 Bacterial trigger factor protein (TF) C2U47_20255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2U47_20260 PF00574 Clp protease C2U47_20265 PF10431 C-terminal, D2-small domain, of ClpB protein C2U47_20265 PF07724 AAA domain (Cdc48 subfamily) C2U47_20265 PF06689 ClpX C4-type zinc finger C2U47_20270 PF05362 Lon protease (S16) C-terminal proteolytic domain C2U47_20270 PF02190 ATP-dependent protease La (LON) substrate-binding domain C2U47_20270 PF00004 ATPase family associated with various cellular activities (AAA) C2U47_20275 PF00216 Bacterial DNA-binding protein C2U47_20280 PF13145 PPIC-type PPIASE domain C2U47_20285 PF00005 ABC transporter C2U47_20285 PF12848 ABC transporter C2U47_20290 PF00474 Sodium:solute symporter family C2U47_20295 PF04341 Protein of unknown function, DUF485 C2U47_20310 PF00378 Enoyl-CoA hydratase/isomerase C2U47_20315 PF01235 Sodium:alanine symporter family C2U47_20325 PF06167 Glucose-regulated metallo-peptidase M90 C2U47_20330 PF01184 GPR1/FUN34/yaaH family C2U47_20340 PF09278 MerR, DNA binding C2U47_20340 PF00376 MerR family regulatory protein C2U47_20350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2U47_20350 PF00364 Biotin-requiring enzyme C2U47_20350 PF00289 Biotin carboxylase, N-terminal domain C2U47_20350 PF02785 Biotin carboxylase C-terminal domain C2U47_20355 PF00378 Enoyl-CoA hydratase/isomerase C2U47_20360 PF01039 Carboxyl transferase domain C2U47_20365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U47_20365 PF02770 Acyl-CoA dehydrogenase, middle domain C2U47_20365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U47_20370 PF00171 Aldehyde dehydrogenase family C2U47_20375 PF02770 Acyl-CoA dehydrogenase, middle domain C2U47_20375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C2U47_20375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C2U47_20380 PF00378 Enoyl-CoA hydratase/isomerase C2U47_20385 PF00378 Enoyl-CoA hydratase/isomerase C2U47_20390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C2U47_20390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C2U47_20400 PF13520 Amino acid permease C2U47_20405 PF01925 Sulfite exporter TauE/SafE C2U47_20435 PF02796 Helix-turn-helix domain of resolvase C2U47_20435 PF00239 Resolvase, N terminal domain C2U47_20470 PF12706 Beta-lactamase superfamily domain C2U47_20475 PF02653 Branched-chain amino acid transport system / permease component C2U47_20480 PF02653 Branched-chain amino acid transport system / permease component C2U47_20485 PF00005 ABC transporter C2U47_20490 PF13407 Periplasmic binding protein domain C2U47_20495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_20495 PF03466 LysR substrate binding domain C2U47_20510 PF02634 FdhD/NarQ family C2U47_20515 PF00384 Molybdopterin oxidoreductase C2U47_20520 PF00990 Diguanylate cyclase, GGDEF domain C2U47_20520 PF00072 Response regulator receiver domain C2U47_20525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_20525 PF03466 LysR substrate binding domain C2U47_20530 PF00232 Glycosyl hydrolase family 1 C2U47_20540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_20540 PF03466 LysR substrate binding domain C2U47_20550 PF00933 Glycosyl hydrolase family 3 N terminal domain C2U47_20555 PF01261 Xylose isomerase-like TIM barrel C2U47_20560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2U47_20560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2U47_20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_20565 PF03466 LysR substrate binding domain C2U47_20575 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U47_20580 PF03279 Bacterial lipid A biosynthesis acyltransferase C2U47_20590 PF05726 Pirin C-terminal cupin domain C2U47_20590 PF02678 Pirin C2U47_20595 PF03104 DNA polymerase family B, exonuclease domain C2U47_20595 PF00136 DNA polymerase family B C2U47_20625 PF01554 MatE C2U47_20630 PF06786 Uncharacterised protein family (UPF0253) C2U47_20635 PF00677 Lumazine binding domain C2U47_20650 PF13419 Haloacid dehalogenase-like hydrolase C2U47_20655 PF01370 NAD dependent epimerase/dehydratase family C2U47_20655 PF02222 ATP-grasp domain C2U47_20660 PF00892 EamA-like transporter family C2U47_20665 PF02525 Flavodoxin-like fold C2U47_20695 PF01385 Probable transposase C2U47_20695 PF12323 Helix-turn-helix domain C2U47_20695 PF07282 Putative transposase DNA-binding domain C2U47_20700 PF17783 CvfB-like winged helix domain C2U47_20700 PF13509 S1 domain C2U47_20710 PF04269 Protein of unknown function, DUF440 C2U47_20720 PF00912 Transglycosylase C2U47_20725 PF04269 Protein of unknown function, DUF440 C2U47_20730 PF03776 Septum formation topological specificity factor MinE C2U47_20735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2U47_20740 PF03775 Septum formation inhibitor MinC, C-terminal domain C2U47_20740 PF05209 Septum formation inhibitor MinC, N-terminal domain C2U47_20745 PF05166 YcgL domain C2U47_20750 PF13406 Transglycosylase SLT domain C2U47_20755 PF03315 Serine dehydratase beta chain C2U47_20755 PF03313 Serine dehydratase alpha chain C2U47_20765 PF03315 Serine dehydratase beta chain C2U47_20765 PF03313 Serine dehydratase alpha chain C2U47_20770 PF06865 Pyrimidine/purine nucleoside phosphorylase C2U47_20775 PF00375 Sodium:dicarboxylate symporter family C2U47_20780 PF00376 MerR family regulatory protein C2U47_20780 PF09278 MerR, DNA binding C2U47_20785 PF02803 Thiolase, C-terminal domain C2U47_20785 PF00108 Thiolase, N-terminal domain C2U47_20790 PF00563 EAL domain C2U47_20790 PF08668 HDOD domain C2U47_20795 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C2U47_20800 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C2U47_20810 PF04542 Sigma-70 region 2 C2U47_20810 PF08281 Sigma-70, region 4 C2U47_20835 PF01882 Protein of unknown function DUF58 C2U47_20840 PF17863 AAA lid domain C2U47_20840 PF07726 ATPase family associated with various cellular activities (AAA) C2U47_20845 PF00108 Thiolase, N-terminal domain C2U47_20845 PF02803 Thiolase, C-terminal domain C2U47_20860 PF07152 YaeQ protein C2U47_20870 PF07690 Major Facilitator Superfamily C2U47_20875 PF00005 ABC transporter C2U47_20880 PF01032 FecCD transport family C2U47_20895 PF05433 Glycine zipper 2TM domain C2U47_20900 PF13193 AMP-binding enzyme C-terminal domain C2U47_20900 PF00501 AMP-binding enzyme C2U47_20910 PF13737 Transposase DDE domain C2U47_20920 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C2U47_20920 PF01502 Phosphoribosyl-AMP cyclohydrolase C2U47_20925 PF00977 Histidine biosynthesis protein C2U47_20940 PF00072 Response regulator receiver domain C2U47_20945 PF00977 Histidine biosynthesis protein C2U47_20950 PF00117 Glutamine amidotransferase class-I C2U47_20955 PF00475 Imidazoleglycerol-phosphate dehydratase C2U47_20955 PF08645 Polynucleotide kinase 3 phosphatase C2U47_20960 PF00155 Aminotransferase class I and II C2U47_20965 PF00815 Histidinol dehydrogenase C2U47_20970 PF08029 HisG, C-terminal domain C2U47_20970 PF01634 ATP phosphoribosyltransferase C2U47_20985 PF00814 Glycoprotease family C2U47_20995 PF00561 alpha/beta hydrolase fold C2U47_21000 PF00501 AMP-binding enzyme C2U47_21000 PF13193 AMP-binding enzyme C-terminal domain C2U47_21005 PF01612 3'-5' exonuclease C2U47_21005 PF00570 HRDC domain C2U47_21025 PF01207 Dihydrouridine synthase (Dus) C2U47_21030 PF04304 Protein of unknown function (DUF454) C2U47_21035 PF00156 Phosphoribosyl transferase domain C2U47_21040 PF12170 DNA polymerase III tau subunit V interacting with alpha C2U47_21040 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C2U47_21040 PF12169 DNA polymerase III subunits gamma and tau domain III C2U47_21045 PF02575 YbaB/EbfC DNA-binding family C2U47_21050 PF03466 LysR substrate binding domain C2U47_21050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_21055 PF05726 Pirin C-terminal cupin domain C2U47_21055 PF02678 Pirin C2U47_21065 PF00072 Response regulator receiver domain C2U47_21065 PF00196 Bacterial regulatory proteins, luxR family C2U47_21075 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C2U47_21075 PF00270 DEAD/DEAH box helicase C2U47_21075 PF00271 Helicase conserved C-terminal domain C2U47_21075 PF11898 Domain of unknown function (DUF3418) C2U47_21075 PF04408 Helicase associated domain (HA2) C2U47_21085 PF01386 Ribosomal L25p family C2U47_21100 PF00753 Metallo-beta-lactamase superfamily C2U47_21110 PF02769 AIR synthase related protein, C-terminal domain C2U47_21110 PF00586 AIR synthase related protein, N-terminal domain C2U47_21125 PF17785 PUA-like domain C2U47_21125 PF10672 S-adenosylmethionine-dependent methyltransferase C2U47_21130 PF12729 Four helix bundle sensory module for signal transduction C2U47_21130 PF00672 HAMP domain C2U47_21130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_21135 PF00708 Acylphosphatase C2U47_21145 PF01588 Putative tRNA binding domain C2U47_21145 PF09334 tRNA synthetases class I (M) C2U47_21145 PF08264 Anticodon-binding domain of tRNA C2U47_21150 PF10609 NUBPL iron-transfer P-loop NTPase C2U47_21155 PF00485 Phosphoribulokinase / Uridine kinase family C2U47_21160 PF00692 dUTPase C2U47_21165 PF01384 Phosphate transporter family C2U47_21170 PF00575 S1 RNA binding domain C2U47_21170 PF10150 Ribonuclease E/G family C2U47_21170 PF12111 Polyribonucleotide phosphorylase C terminal C2U47_21175 PF01479 S4 domain C2U47_21175 PF00849 RNA pseudouridylate synthase C2U47_21180 PF02545 Maf-like protein C2U47_21190 PF02620 Large ribosomal RNA subunit accumulation protein YceD C2U47_21195 PF01783 Ribosomal L32p protein family C2U47_21200 PF02504 Fatty acid synthesis protein C2U47_21205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2U47_21205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2U47_21210 PF00698 Acyl transferase domain C2U47_21220 PF00550 Phosphopantetheine attachment site C2U47_21225 PF00109 Beta-ketoacyl synthase, N-terminal domain C2U47_21225 PF02801 Beta-ketoacyl synthase, C-terminal domain C2U47_21230 PF01063 Amino-transferase class IV C2U47_21235 PF02618 YceG-like family C2U47_21240 PF02223 Thymidylate kinase C2U47_21245 PF09115 DNA polymerase III, delta subunit, C terminal C2U47_21250 PF01026 TatD related DNase C2U47_21255 PF00589 Phage integrase family C2U47_21265 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C2U47_21265 PF01189 16S rRNA methyltransferase RsmB/F C2U47_21265 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C2U47_21270 PF02470 MlaD protein C2U47_21275 PF04403 Paraquat-inducible protein A C2U47_21285 PF07130 YebG protein C2U47_21295 PF05362 Lon protease (S16) C-terminal proteolytic domain C2U47_21295 PF13654 AAA domain C2U47_21300 PF07977 FabA-like domain C2U47_21305 PF04957 Ribosome modulation factor C2U47_21325 PF10672 S-adenosylmethionine-dependent methyltransferase C2U47_21325 PF02926 THUMP domain C2U47_21325 PF01170 Putative RNA methylase family UPF0020 C2U47_21330 PF07126 Cell-division protein ZapC C2U47_21335 PF01180 Dihydroorotate dehydrogenase C2U47_21350 PF11940 Domain of unknown function (DUF3458) Ig-like fold C2U47_21350 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C2U47_21350 PF01433 Peptidase family M1 domain C2U47_21355 PF11818 C-terminal domain of tail specific protease (DUF3340) C2U47_21355 PF00595 PDZ domain C2U47_21355 PF03572 Peptidase family S41 C2U47_21355 PF17804 Tail specific protease N-terminal domain C2U47_21360 PF04352 ProQ/FINO family C2U47_21360 PF17516 ProQ C-terminal domain C2U47_21365 PF13185 GAF domain C2U47_21375 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2U47_21390 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C2U47_21390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2U47_21400 PF00403 Heavy-metal-associated domain C2U47_21415 PF00027 Cyclic nucleotide-binding domain C2U47_21415 PF13545 Crp-like helix-turn-helix domain C2U47_21420 PF00582 Universal stress protein family C2U47_21425 PF01171 PP-loop family C2U47_21440 PF02798 Glutathione S-transferase, N-terminal domain C2U47_21440 PF00043 Glutathione S-transferase, C-terminal domain C2U47_21445 PF05025 RbsD / FucU transport protein family C2U47_21450 PF00005 ABC transporter C2U47_21455 PF02653 Branched-chain amino acid transport system / permease component C2U47_21460 PF13407 Periplasmic binding protein domain C2U47_21465 PF00294 pfkB family carbohydrate kinase C2U47_21470 PF00356 Bacterial regulatory proteins, lacI family C2U47_21495 PF02146 Sir2 family C2U47_21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_21510 PF00512 His Kinase A (phospho-acceptor) domain C2U47_21510 PF00072 Response regulator receiver domain C2U47_21510 PF09456 RcsC Alpha-Beta-Loop (ABL) C2U47_21515 PF00216 Bacterial DNA-binding protein C2U47_21520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C2U47_21520 PF03483 B3/4 domain C2U47_21520 PF03484 tRNA synthetase B5 domain C2U47_21520 PF03147 Ferredoxin-fold anticodon binding domain C2U47_21520 PF01588 Putative tRNA binding domain C2U47_21525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C2U47_21525 PF01409 tRNA synthetases class II core domain (F) C2U47_21530 PF00453 Ribosomal protein L20 C2U47_21535 PF01632 Ribosomal protein L35 C2U47_21540 PF05198 Translation initiation factor IF-3, N-terminal domain C2U47_21540 PF00707 Translation initiation factor IF-3, C-terminal domain C2U47_21545 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2U47_21545 PF03129 Anticodon binding domain C2U47_21545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2U47_21545 PF02824 TGS domain C2U47_21560 PF04055 Radical SAM superfamily C2U47_21565 PF03989 DNA gyrase C-terminal domain, beta-propeller C2U47_21565 PF00521 DNA gyrase/topoisomerase IV, subunit A C2U47_21575 PF13419 Haloacid dehalogenase-like hydrolase C2U47_21580 PF02867 Ribonucleotide reductase, barrel domain C2U47_21580 PF03477 ATP cone domain C2U47_21580 PF00317 Ribonucleotide reductase, all-alpha domain C2U47_21585 PF00268 Ribonucleotide reductase, small chain C2U47_21590 PF00111 2Fe-2S iron-sulfur cluster binding domain C2U47_21595 PF03562 MltA specific insert domain C2U47_21595 PF06725 3D domain C2U47_21600 PF06945 Protein of unknown function (DUF1289) C2U47_21605 PF02378 Phosphotransferase system, EIIC C2U47_21605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C2U47_21610 PF00294 pfkB family carbohydrate kinase C2U47_21615 PF00381 PTS HPr component phosphorylation site C2U47_21615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C2U47_21620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C2U47_21620 PF00356 Bacterial regulatory proteins, lacI family C2U47_21625 PF03222 Tryptophan/tyrosine permease family C2U47_21640 PF01609 Transposase DDE domain C2U47_21640 PF13006 Insertion element 4 transposase N-terminal C2U47_21645 PF00271 Helicase conserved C-terminal domain C2U47_21645 PF00270 DEAD/DEAH box helicase C2U47_21655 PF01264 Chorismate synthase C2U47_21660 PF05175 Methyltransferase small domain C2U47_21665 PF01713 Smr domain C2U47_21700 PF03831 PhnA domain C2U47_21700 PF08274 PhnA Zinc-Ribbon C2U47_21760 PF03330 Lytic transglycolase C2U47_21760 PF05036 Sporulation related domain C2U47_21765 PF16330 MukB hinge domain C2U47_21765 PF04310 MukB N-terminal C2U47_21770 PF04288 MukE-like family C2U47_21775 PF17193 MukF C-terminal domain C2U47_21775 PF17192 MukF middle domain C2U47_21775 PF03882 MukF winged-helix domain C2U47_21785 PF02698 DUF218 domain C2U47_21790 PF00121 Triosephosphate isomerase C2U47_21795 PF00365 Phosphofructokinase C2U47_21810 PF07687 Peptidase dimerisation domain C2U47_21810 PF01546 Peptidase family M20/M25/M40 C2U47_21815 PF13419 Haloacid dehalogenase-like hydrolase C2U47_21820 PF00883 Cytosol aminopeptidase family, catalytic domain C2U47_21820 PF02789 Cytosol aminopeptidase family, N-terminal domain C2U47_21860 PF11398 Protein of unknown function (DUF2813) C2U47_21875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_21875 PF03466 LysR substrate binding domain C2U47_21880 PF01925 Sulfite exporter TauE/SafE C2U47_21890 PF07478 D-ala D-ala ligase C-terminus C2U47_21890 PF01820 D-ala D-ala ligase N-terminus C2U47_21900 PF00255 Glutathione peroxidase C2U47_21905 PF00270 DEAD/DEAH box helicase C2U47_21905 PF00271 Helicase conserved C-terminal domain C2U47_21910 PF00583 Acetyltransferase (GNAT) family C2U47_21925 PF01928 CYTH domain C2U47_21935 PF13673 Acetyltransferase (GNAT) domain C2U47_21940 PF03992 Antibiotic biosynthesis monooxygenase C2U47_21945 PF08543 Phosphomethylpyrimidine kinase C2U47_21965 PF00561 alpha/beta hydrolase fold C2U47_21965 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C2U47_21970 PF01575 MaoC like domain C2U47_21995 PF00005 ABC transporter C2U47_21995 PF00664 ABC transporter transmembrane region C2U47_22005 PF00512 His Kinase A (phospho-acceptor) domain C2U47_22005 PF00072 Response regulator receiver domain C2U47_22005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C2U47_22005 PF00672 HAMP domain C2U47_22005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_22005 PF01627 Hpt domain C2U47_22010 PF00085 Thioredoxin C2U47_22015 PF00939 Sodium:sulfate symporter transmembrane region C2U47_22020 PF01609 Transposase DDE domain C2U47_22020 PF13006 Insertion element 4 transposase N-terminal C2U47_22030 PF00343 Carbohydrate phosphorylase C2U47_22050 PF00425 chorismate binding enzyme C2U47_22050 PF04715 Anthranilate synthase component I, N terminal region C2U47_22055 PF00293 NUDIX domain C2U47_22060 PF03222 Tryptophan/tyrosine permease family C2U47_22065 PF00375 Sodium:dicarboxylate symporter family C2U47_22075 PF01609 Transposase DDE domain C2U47_22075 PF13006 Insertion element 4 transposase N-terminal C2U47_22085 PF06798 PrkA serine protein kinase C-terminal domain C2U47_22085 PF08298 PrkA AAA domain C2U47_22090 PF04285 Protein of unknown function (DUF444) C2U47_22095 PF04293 SpoVR like protein C2U47_22100 PF07840 FadR C-terminal domain C2U47_22100 PF00392 Bacterial regulatory proteins, gntR family C2U47_22105 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C2U47_22110 PF02600 Disulfide bond formation protein DsbB C2U47_22115 PF09335 SNARE associated Golgi protein C2U47_22125 PF04851 Type III restriction enzyme, res subunit C2U47_22125 PF00271 Helicase conserved C-terminal domain C2U47_22125 PF02151 UvrB/uvrC motif C2U47_22125 PF17757 UvrB interaction domain C2U47_22125 PF12344 Ultra-violet resistance protein B C2U47_22140 PF06826 Predicted Permease Membrane Region C2U47_22140 PF02080 TrkA-C domain C2U47_22145 PF01551 Peptidase family M23 C2U47_22145 PF10145 Phage-related minor tail protein C2U47_22145 PF01464 Transglycosylase SLT domain C2U47_22150 PF03401 Tripartite tricarboxylate transporter family receptor C2U47_22160 PF01970 Tripartite tricarboxylate transporter TctA family C2U47_22165 PF00072 Response regulator receiver domain C2U47_22170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2U47_22170 PF00989 PAS fold C2U47_22170 PF17203 Single cache domain 3 C2U47_22170 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C2U47_22175 PF01047 MarR family C2U47_22175 PF00480 ROK family C2U47_22180 PF17200 Single Cache domain 2 C2U47_22180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2U47_22180 PF00672 HAMP domain C2U47_22185 PF02810 SEC-C motif C2U47_22190 PF04324 BFD-like [2Fe-2S] binding domain C2U47_22190 PF01266 FAD dependent oxidoreductase C2U47_22195 PF00890 FAD binding domain C2U47_22205 PF02335 Cytochrome c552 C2U47_22210 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C2U47_22210 PF13435 Cytochrome c554 and c-prime C2U47_22215 PF13247 4Fe-4S dicluster domain C2U47_22215 PF00037 4Fe-4S binding domain C2U47_22225 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C2U47_22225 PF01578 Cytochrome C assembly protein C2U47_22230 PF08534 Redoxin C2U47_22235 PF03918 Cytochrome C biogenesis protein C2U47_22240 PF00768 D-alanyl-D-alanine carboxypeptidase C2U47_22250 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C2U47_22255 PF01266 FAD dependent oxidoreductase C2U47_22265 PF07969 Amidohydrolase family C2U47_22270 PF00571 CBS domain C2U47_22270 PF00478 IMP dehydrogenase / GMP reductase domain C2U47_22280 PF08267 Cobalamin-independent synthase, N-terminal domain C2U47_22280 PF01717 Cobalamin-independent synthase, Catalytic domain C2U47_22285 PF03466 LysR substrate binding domain C2U47_22285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_22300 PF00990 Diguanylate cyclase, GGDEF domain C2U47_22305 PF12792 CSS motif domain associated with EAL C2U47_22305 PF00563 EAL domain C2U47_22310 PF02311 AraC-like ligand binding domain C2U47_22310 PF12833 Helix-turn-helix domain C2U47_22315 PF03466 LysR substrate binding domain C2U47_22315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_22320 PF13460 NAD(P)H-binding C2U47_22330 PF01053 Cys/Met metabolism PLP-dependent enzyme C2U47_22335 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C2U47_22335 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C2U47_22355 PF00141 Peroxidase C2U47_22370 PF00232 Glycosyl hydrolase family 1 C2U47_22375 PF00367 phosphotransferase system, EIIB C2U47_22375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C2U47_22375 PF02378 Phosphotransferase system, EIIC C2U47_22380 PF01418 Helix-turn-helix domain, rpiR family C2U47_22380 PF01380 SIS domain C2U47_22395 PF10722 Putative bacterial sensory transduction regulator C2U47_22405 PF00265 Thymidine kinase C2U47_22410 PF03553 Na+/H+ antiporter family C2U47_22415 PF00816 H-NS histone family C2U47_22420 PF01923 Cobalamin adenosyltransferase C2U47_22425 PF12843 Putative quorum-sensing-regulated virulence factor C2U47_22430 PF04055 Radical SAM superfamily C2U47_22435 PF06508 Queuosine biosynthesis protein QueC C2U47_22450 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C2U47_22455 PF18073 Rubredoxin metal binding domain C2U47_22465 PF00216 Bacterial DNA-binding protein C2U47_22470 PF00575 S1 RNA binding domain C2U47_22475 PF02224 Cytidylate kinase C2U47_22480 PF00925 GTP cyclohydrolase II C2U47_22485 PF03466 LysR substrate binding domain C2U47_22485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C2U47_22505 PF00881 Nitroreductase family C2U47_22510 PF03806 AbgT putative transporter family C2U47_22545 PF02796 Helix-turn-helix domain of resolvase C2U47_22545 PF00239 Resolvase, N terminal domain C2U47_22555 PF13495 Phage integrase, N-terminal SAM-like domain C2U47_22555 PF00589 Phage integrase family C2U47_22565 PF01810 LysE type translocator C2U47_22590 PF01695 IstB-like ATP binding protein C2U47_22595 PF02796 Helix-turn-helix domain of resolvase C2U47_22595 PF00665 Integrase core domain C2U47_22605 PF02899 Phage integrase, N-terminal SAM-like domain C2U47_22605 PF00589 Phage integrase family C2U47_22630 PF01381 Helix-turn-helix C2U47_22675 PF13614 AAA domain C2U47_22715 PF13362 Toprim domain C2U47_22715 PF18818 Metallopeptidase superfamily domain C2U47_22715 PF08401 Domain of unknown function (DUF1738) C2U47_22720 PF02534 Type IV secretory system Conjugative DNA transfer C2U47_22725 PF00437 Type II/IV secretion system protein C2U47_22730 PF03743 Bacterial conjugation TrbI-like protein C2U47_22735 PF03524 Conjugal transfer protein C2U47_22740 PF04335 VirB8 protein C2U47_22750 PF04610 TrbL/VirB6 plasmid conjugal transfer protein C2U47_22765 PF03135 CagE, TrbE, VirB family, component of type IV transporter system