locus-tag class description NUT31_00010 PF03472 Autoinducer binding domain NUT31_00010 PF00196 Bacterial regulatory proteins, luxR family NUT31_00015 PF05638 Type VI secretion system effector, Hcp NUT31_00025 PF04717 Type VI secretion system, phage-baseplate injector NUT31_00045 PF03466 LysR substrate binding domain NUT31_00045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_00050 PF03306 Alpha-acetolactate decarboxylase NUT31_00055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NUT31_00055 PF00205 Thiamine pyrophosphate enzyme, central domain NUT31_00055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NUT31_00060 PF01965 DJ-1/PfpI family NUT31_00065 PF02558 Ketopantoate reductase PanE/ApbA NUT31_00065 PF08546 Ketopantoate reductase PanE/ApbA C terminal NUT31_00070 PF04461 Protein of unknown function (DUF520) NUT31_00075 PF03502 Nucleoside-specific channel-forming protein, Tsx NUT31_00080 PF07690 Major Facilitator Superfamily NUT31_00090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NUT31_00100 PF05175 Methyltransferase small domain NUT31_00105 PF01722 BolA-like protein NUT31_00115 PF11973 NQRA C-terminal domain NUT31_00115 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NUT31_00120 PF03116 NQR2, RnfD, RnfE family NUT31_00125 PF04205 FMN-binding domain NUT31_00130 PF02508 Rnf-Nqr subunit, membrane protein NUT31_00135 PF02508 Rnf-Nqr subunit, membrane protein NUT31_00140 PF00175 Oxidoreductase NAD-binding domain NUT31_00140 PF00111 2Fe-2S iron-sulfur cluster binding domain NUT31_00140 PF00970 Oxidoreductase FAD-binding domain NUT31_00145 PF02424 ApbE family NUT31_00160 PF11799 impB/mucB/samB family C-terminal domain NUT31_00160 PF00817 impB/mucB/samB family NUT31_00160 PF11798 IMS family HHH motif NUT31_00165 PF00672 HAMP domain NUT31_00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_00170 PF03466 LysR substrate binding domain NUT31_00170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_00180 PF04241 Protein of unknown function (DUF423) NUT31_00185 PF18125 RlmM ferredoxin-like domain NUT31_00185 PF01728 FtsJ-like methyltransferase NUT31_00195 PF00180 Isocitrate/isopropylmalate dehydrogenase NUT31_00195 PF18324 Hypothetical protein TT1725 NUT31_00200 PF01367 5'-3' exonuclease, C-terminal SAM fold NUT31_00200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NUT31_00205 PF03641 Possible lysine decarboxylase NUT31_00205 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NUT31_00205 PF11892 Domain of unknown function (DUF3412) NUT31_00210 PF00990 Diguanylate cyclase, GGDEF domain NUT31_00220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NUT31_00220 PF14489 QueF-like protein NUT31_00225 PF07348 Syd protein (SUKH-2) NUT31_00230 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NUT31_00255 PF04287 tRNA pseudouridine synthase C NUT31_00260 PF00849 RNA pseudouridylate synthase NUT31_00265 PF00258 Flavodoxin NUT31_00270 PF02264 LamB porin NUT31_00275 PF07148 Maltose operon periplasmic protein precursor (MalM) NUT31_00280 PF02378 Phosphotransferase system, EIIC NUT31_00280 PF00367 phosphotransferase system, EIIB NUT31_00285 PF11944 Protein of unknown function (DUF3461) NUT31_00290 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NUT31_00290 PF14602 Hexapeptide repeat of succinyl-transferase NUT31_00290 PF00132 Bacterial transferase hexapeptide (six repeats) NUT31_00295 PF01842 ACT domain NUT31_00295 PF08335 GlnD PII-uridylyltransferase NUT31_00295 PF01966 HD domain NUT31_00295 PF01909 Nucleotidyltransferase domain NUT31_00300 PF00557 Metallopeptidase family M24 NUT31_00305 PF00318 Ribosomal protein S2 NUT31_00310 PF00889 Elongation factor TS NUT31_00315 PF00696 Amino acid kinase family NUT31_00320 PF01765 Ribosome recycling factor NUT31_00325 PF01255 Putative undecaprenyl diphosphate synthase NUT31_00335 PF13288 DXP reductoisomerase C-terminal domain NUT31_00335 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NUT31_00335 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NUT31_00340 PF17820 PDZ domain NUT31_00340 PF02163 Peptidase family M50 NUT31_00345 PF07244 Surface antigen variable number repeat NUT31_00345 PF01103 Surface antigen NUT31_00350 PF03938 Outer membrane protein (OmpH-like) NUT31_00355 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NUT31_00355 PF00132 Bacterial transferase hexapeptide (six repeats) NUT31_00360 PF07977 FabA-like domain NUT31_00365 PF00132 Bacterial transferase hexapeptide (six repeats) NUT31_00365 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NUT31_00370 PF02684 Lipid-A-disaccharide synthetase NUT31_00375 PF01351 Ribonuclease HII NUT31_00380 PF14579 Helix-hairpin-helix motif NUT31_00380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NUT31_00380 PF07733 Bacterial DNA polymerase III alpha NTPase domain NUT31_00380 PF02811 PHP domain NUT31_00380 PF01336 OB-fold nucleic acid binding domain NUT31_00385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NUT31_00390 PF18500 CadC C-terminal domain 1 NUT31_00390 PF00486 Transcriptional regulatory protein, C terminal NUT31_00395 PF13520 Amino acid permease NUT31_00400 PF01276 Orn/Lys/Arg decarboxylase, major domain NUT31_00400 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NUT31_00400 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NUT31_00405 PF08543 Phosphomethylpyrimidine kinase NUT31_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_00415 PF03466 LysR substrate binding domain NUT31_00425 PF13520 Amino acid permease NUT31_00430 PF13302 Acetyltransferase (GNAT) domain NUT31_00435 PF00005 ABC transporter NUT31_00435 PF16326 ABC transporter C-terminal domain NUT31_00435 PF12848 ABC transporter NUT31_00445 PF05649 Peptidase family M13 NUT31_00445 PF01431 Peptidase family M13 NUT31_00450 PF09179 TilS substrate binding domain NUT31_00450 PF01171 PP-loop family NUT31_00450 PF11734 TilS substrate C-terminal domain NUT31_00455 PF00990 Diguanylate cyclase, GGDEF domain NUT31_00460 PF02080 TrkA-C domain NUT31_00460 PF02254 TrkA-N domain NUT31_00460 PF00999 Sodium/hydrogen exchanger family NUT31_00485 PF00072 Response regulator receiver domain NUT31_00485 PF00196 Bacterial regulatory proteins, luxR family NUT31_00495 PF00128 Alpha amylase, catalytic domain NUT31_00510 PF00535 Glycosyl transferase family 2 NUT31_00525 PF01471 Putative peptidoglycan binding domain NUT31_00525 PF03734 L,D-transpeptidase catalytic domain NUT31_00530 PF05951 Bacterial protein of unknown function (DUF882) NUT31_00540 PF03458 UPF0126 domain NUT31_00550 PF02463 RecF/RecN/SMC N terminal domain NUT31_00550 PF06470 SMC proteins Flexible Hinge Domain NUT31_00555 PF04354 ZipA, C-terminal FtsZ-binding domain NUT31_00560 PF00533 BRCA1 C Terminus (BRCT) domain NUT31_00560 PF01653 NAD-dependent DNA ligase adenylation domain NUT31_00560 PF03120 NAD-dependent DNA ligase OB-fold domain NUT31_00560 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NUT31_00560 PF12826 Helix-hairpin-helix motif NUT31_00570 PF13597 Anaerobic ribonucleoside-triphosphate reductase NUT31_00570 PF03477 ATP cone domain NUT31_00580 PF01679 Proteolipid membrane potential modulator NUT31_00605 PF00529 HlyD membrane-fusion protein of T1SS NUT31_00605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_00610 PF01047 MarR family NUT31_00620 PF03390 2-hydroxycarboxylate transporter family NUT31_00625 PF00390 Malic enzyme, N-terminal domain NUT31_00625 PF03949 Malic enzyme, NAD binding domain NUT31_00630 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NUT31_00630 PF17203 Single cache domain 3 NUT31_00630 PF00989 PAS fold NUT31_00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_00635 PF00072 Response regulator receiver domain NUT31_00635 PF12431 Transcriptional regulator NUT31_00640 PF00892 EamA-like transporter family NUT31_00650 PF00171 Aldehyde dehydrogenase family NUT31_00655 PF01590 GAF domain NUT31_00655 PF02954 Bacterial regulatory protein, Fis family NUT31_00655 PF00158 Sigma-54 interaction domain NUT31_00660 PF02770 Acyl-CoA dehydrogenase, middle domain NUT31_00660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUT31_00660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUT31_00665 PF02515 CoA-transferase family III NUT31_00670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUT31_00675 PF00486 Transcriptional regulatory protein, C terminal NUT31_00675 PF00072 Response regulator receiver domain NUT31_00680 PF11808 Phosphate regulon sensor protein PhoR NUT31_00680 PF00989 PAS fold NUT31_00680 PF00512 His Kinase A (phospho-acceptor) domain NUT31_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_00685 PF12849 PBP superfamily domain NUT31_00690 PF01435 Peptidase family M48 NUT31_00700 PF00480 ROK family NUT31_00705 PF03932 CutC family NUT31_00715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUT31_00715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NUT31_00720 PF00005 ABC transporter NUT31_00740 PF00293 NUDIX domain NUT31_00750 PF08534 Redoxin NUT31_00755 PF01699 Sodium/calcium exchanger protein NUT31_00760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NUT31_00760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NUT31_00765 PF01235 Sodium:alanine symporter family NUT31_00775 PF00860 Permease family NUT31_00780 PF00990 Diguanylate cyclase, GGDEF domain NUT31_00780 PF00072 Response regulator receiver domain NUT31_00785 PF10692 Protein of unknown function (DUF2498) NUT31_00790 PF01554 MatE NUT31_00795 PF12833 Helix-turn-helix domain NUT31_00800 PF00390 Malic enzyme, N-terminal domain NUT31_00800 PF03949 Malic enzyme, NAD binding domain NUT31_00805 PF00691 OmpA family NUT31_00805 PF01389 OmpA-like transmembrane domain NUT31_00810 PF01389 OmpA-like transmembrane domain NUT31_00810 PF00691 OmpA family NUT31_00815 PF00691 OmpA family NUT31_00815 PF01389 OmpA-like transmembrane domain NUT31_00830 PF00209 Sodium:neurotransmitter symporter family NUT31_00835 PF01734 Patatin-like phospholipase NUT31_00840 PF00990 Diguanylate cyclase, GGDEF domain NUT31_00845 PF00529 HlyD membrane-fusion protein of T1SS NUT31_00845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_00850 PF00873 AcrB/AcrD/AcrF family NUT31_00860 PF11842 Domain of unknown function (DUF3362) NUT31_00860 PF04055 Radical SAM superfamily NUT31_00860 PF08497 Radical SAM N-terminal NUT31_00875 PF12833 Helix-turn-helix domain NUT31_00880 PF05656 Protein of unknown function (DUF805) NUT31_00900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NUT31_00905 PF02075 Crossover junction endodeoxyribonuclease RuvC NUT31_00910 PF00230 Major intrinsic protein NUT31_00915 PF01464 Transglycosylase SLT domain NUT31_00915 PF01551 Peptidase family M23 NUT31_00915 PF10145 Phage-related minor tail protein NUT31_00920 PF00128 Alpha amylase, catalytic domain NUT31_00925 PF01551 Peptidase family M23 NUT31_00940 PF13396 Phospholipase_D-nuclease N-terminal NUT31_00940 PF13091 PLD-like domain NUT31_00950 PF00551 Formyl transferase NUT31_00950 PF01842 ACT domain NUT31_00955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NUT31_00965 PF00085 Thioredoxin NUT31_00970 PF01648 4'-phosphopantetheinyl transferase superfamily NUT31_00975 PF00877 NlpC/P60 family NUT31_00980 PF05971 RNA methyltransferase NUT31_00985 PF01575 MaoC like domain NUT31_00995 PF01476 LysM domain NUT31_00995 PF17969 L,D-transpeptidase C-terminal domain NUT31_00995 PF03734 L,D-transpeptidase catalytic domain NUT31_01010 PF07690 Major Facilitator Superfamily NUT31_01020 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NUT31_01025 PF03466 LysR substrate binding domain NUT31_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_01035 PF00893 Small Multidrug Resistance protein NUT31_01040 PF00893 Small Multidrug Resistance protein NUT31_01050 PF06130 Phosphate propanoyltransferase NUT31_01055 PF00936 BMC domain NUT31_01060 PF13187 4Fe-4S dicluster domain NUT31_01060 PF04055 Radical SAM superfamily NUT31_01065 PF02901 Pyruvate formate lyase-like NUT31_01065 PF01228 Glycine radical NUT31_01070 PF00171 Aldehyde dehydrogenase family NUT31_01070 PF00465 Iron-containing alcohol dehydrogenase NUT31_01080 PF00465 Iron-containing alcohol dehydrogenase NUT31_01080 PF00171 Aldehyde dehydrogenase family NUT31_01085 PF00936 BMC domain NUT31_01090 PF00936 BMC domain NUT31_01095 PF00936 BMC domain NUT31_01115 PF03466 LysR substrate binding domain NUT31_01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_01120 PF02634 FdhD/NarQ family NUT31_01125 PF00384 Molybdopterin oxidoreductase NUT31_01140 PF00440 Bacterial regulatory proteins, tetR family NUT31_01145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUT31_01145 PF09317 Domain of unknown function (DUF1974) NUT31_01145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUT31_01145 PF02770 Acyl-CoA dehydrogenase, middle domain NUT31_01150 PF00873 AcrB/AcrD/AcrF family NUT31_01160 PF00224 Pyruvate kinase, barrel domain NUT31_01160 PF02887 Pyruvate kinase, alpha/beta domain NUT31_01165 PF01418 Helix-turn-helix domain, rpiR family NUT31_01165 PF01380 SIS domain NUT31_01170 PF02685 Glucokinase NUT31_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_01180 PF00072 Response regulator receiver domain NUT31_01180 PF00486 Transcriptional regulatory protein, C terminal NUT31_01185 PF00005 ABC transporter NUT31_01185 PF03412 Peptidase C39 family NUT31_01185 PF00664 ABC transporter transmembrane region NUT31_01195 PF00005 ABC transporter NUT31_01195 PF03412 Peptidase C39 family NUT31_01195 PF00664 ABC transporter transmembrane region NUT31_01205 PF02794 RTX toxin acyltransferase family NUT31_01210 PF07634 RtxA repeat NUT31_01210 PF16671 Actin cross-linking domain NUT31_01210 PF12146 Serine aminopeptidase, S33 NUT31_01210 PF11647 Membrane Localization Domain NUT31_01210 PF11713 Peptidase C80 family NUT31_01220 PF04055 Radical SAM superfamily NUT31_01220 PF00919 Uncharacterized protein family UPF0004 NUT31_01220 PF18693 TRAM domain NUT31_01225 PF00072 Response regulator receiver domain NUT31_01235 PF02049 Flagellar hook-basal body complex protein FliE NUT31_01240 PF01514 Secretory protein of YscJ/FliF family NUT31_01240 PF08345 Flagellar M-ring protein C-terminal NUT31_01245 PF14841 FliG middle domain NUT31_01245 PF01706 FliG C-terminal domain NUT31_01245 PF14842 FliG N-terminal domain NUT31_01255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NUT31_01255 PF18269 T3SS EscN ATPase C-terminal domain NUT31_01275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NUT31_01275 PF02154 Flagellar motor switch protein FliM NUT31_01280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NUT31_01285 PF04347 Flagellar biosynthesis protein, FliO NUT31_01290 PF00813 FliP family NUT31_01295 PF01313 Bacterial export proteins, family 3 NUT31_01300 PF01311 Bacterial export proteins, family 1 NUT31_01305 PF01312 FlhB HrpN YscU SpaS Family NUT31_01310 PF00771 FHIPEP family NUT31_01315 PF00448 SRP54-type protein, GTPase domain NUT31_01320 PF10609 NUBPL iron-transfer P-loop NTPase NUT31_01325 PF04542 Sigma-70 region 2 NUT31_01325 PF04539 Sigma-70 region 3 NUT31_01325 PF04545 Sigma-70, region 4 NUT31_01330 PF00072 Response regulator receiver domain NUT31_01335 PF04344 Chemotaxis phosphatase, CheZ NUT31_01340 PF01584 CheW-like domain NUT31_01340 PF02895 Signal transducing histidine kinase, homodimeric domain NUT31_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_01340 PF01627 Hpt domain NUT31_01340 PF00072 Response regulator receiver domain NUT31_01345 PF00072 Response regulator receiver domain NUT31_01345 PF01339 CheB methylesterase NUT31_01350 PF01618 MotA/TolQ/ExbB proton channel family NUT31_01355 PF00691 OmpA family NUT31_01355 PF13677 Membrane MotB of proton-channel complex MotA/MotB NUT31_01360 PF13614 AAA domain NUT31_01370 PF01584 CheW-like domain NUT31_01380 PF00005 ABC transporter NUT31_01385 PF03379 CcmB protein NUT31_01390 PF01578 Cytochrome C assembly protein NUT31_01395 PF04995 Heme exporter protein D (CcmD) NUT31_01400 PF03100 CcmE NUT31_01405 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NUT31_01405 PF01578 Cytochrome C assembly protein NUT31_01410 PF08534 Redoxin NUT31_01415 PF03918 Cytochrome C biogenesis protein NUT31_01420 PF03918 Cytochrome C biogenesis protein NUT31_01425 PF04333 MlaA lipoprotein NUT31_01430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NUT31_01430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NUT31_01435 PF00462 Glutaredoxin NUT31_01440 PF01189 16S rRNA methyltransferase RsmB/F NUT31_01440 PF01029 NusB family NUT31_01455 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NUT31_01455 PF01243 Pyridoxamine 5'-phosphate oxidase NUT31_01460 PF02798 Glutathione S-transferase, N-terminal domain NUT31_01470 PF13508 Acetyltransferase (GNAT) domain NUT31_01480 PF08007 Cupin superfamily protein NUT31_01485 PF08328 Adenylosuccinate lyase C-terminal NUT31_01485 PF00206 Lyase NUT31_01490 PF04356 Protein of unknown function (DUF489) NUT31_01500 PF00293 NUDIX domain NUT31_01505 PF00849 RNA pseudouridylate synthase NUT31_01515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NUT31_01515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUT31_01515 PF02378 Phosphotransferase system, EIIC NUT31_01520 PF07690 Major Facilitator Superfamily NUT31_01525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NUT31_01525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUT31_01525 PF02378 Phosphotransferase system, EIIC NUT31_01545 PF00583 Acetyltransferase (GNAT) family NUT31_01555 PF00356 Bacterial regulatory proteins, lacI family NUT31_01555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NUT31_01560 PF00367 phosphotransferase system, EIIB NUT31_01560 PF02378 Phosphotransferase system, EIIC NUT31_01565 PF00155 Aminotransferase class I and II NUT31_01600 PF01238 Phosphomannose isomerase type I NUT31_01605 PF12833 Helix-turn-helix domain NUT31_01610 PF00180 Isocitrate/isopropylmalate dehydrogenase NUT31_01620 PF00291 Pyridoxal-phosphate dependent enzyme NUT31_01625 PF02447 GntP family permease NUT31_01630 PF03466 LysR substrate binding domain NUT31_01630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_01690 PF00589 Phage integrase family NUT31_01690 PF13356 Arm DNA-binding domain NUT31_01695 PF15935 RNase LS, bacterial toxin NUT31_01700 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA NUT31_01705 PF02796 Helix-turn-helix domain of resolvase NUT31_01705 PF00239 Resolvase, N terminal domain NUT31_01745 PF01668 SmpB protein NUT31_01750 PF03364 Polyketide cyclase / dehydrase and lipid transport NUT31_01755 PF03658 RnfH family Ubiquitin NUT31_01760 PF13460 NAD(P)H-binding NUT31_01765 PF04355 SmpA / OmlA family NUT31_01795 PF04972 BON domain NUT31_01795 PF00263 Bacterial type II and III secretion system protein NUT31_01795 PF13629 Pilus formation protein N terminal region NUT31_01810 PF00437 Type II/IV secretion system protein NUT31_01845 PF00465 Iron-containing alcohol dehydrogenase NUT31_01850 PF01048 Phosphorylase superfamily NUT31_01855 PF00849 RNA pseudouridylate synthase NUT31_01860 PF01156 Inosine-uridine preferring nucleoside hydrolase NUT31_01875 PF07509 Protein of unknown function (DUF1523) NUT31_01880 PF00672 HAMP domain NUT31_01880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_01885 PF01810 LysE type translocator NUT31_01895 PF03471 Transporter associated domain NUT31_01895 PF00999 Sodium/hydrogen exchanger family NUT31_01895 PF02080 TrkA-C domain NUT31_01905 PF03471 Transporter associated domain NUT31_01905 PF00999 Sodium/hydrogen exchanger family NUT31_01905 PF02080 TrkA-C domain NUT31_01915 PF02557 D-alanyl-D-alanine carboxypeptidase NUT31_01920 PF01546 Peptidase family M20/M25/M40 NUT31_01920 PF07687 Peptidase dimerisation domain NUT31_01925 PF03960 ArsC family NUT31_01930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_01930 PF03466 LysR substrate binding domain NUT31_01940 PF03606 C4-dicarboxylate anaerobic carrier NUT31_01945 PF07687 Peptidase dimerisation domain NUT31_01945 PF01546 Peptidase family M20/M25/M40 NUT31_01955 PF03605 Anaerobic c4-dicarboxylate membrane transporter NUT31_01960 PF01336 OB-fold nucleic acid binding domain NUT31_01960 PF00152 tRNA synthetases class II (D, K and N) NUT31_01975 PF00202 Aminotransferase class-III NUT31_01980 PF06968 Biotin and Thiamin Synthesis associated domain NUT31_01980 PF04055 Radical SAM superfamily NUT31_01985 PF00155 Aminotransferase class I and II NUT31_01990 PF12697 Alpha/beta hydrolase family NUT31_01990 PF08241 Methyltransferase domain NUT31_02000 PF01435 Peptidase family M48 NUT31_02005 PF08447 PAS fold NUT31_02005 PF13426 PAS domain NUT31_02005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_02010 PF03473 MOSC domain NUT31_02010 PF00111 2Fe-2S iron-sulfur cluster binding domain NUT31_02010 PF03476 MOSC N-terminal beta barrel domain NUT31_02010 PF03473 MOSC domain NUT31_02010 PF00111 2Fe-2S iron-sulfur cluster binding domain NUT31_02010 PF03476 MOSC N-terminal beta barrel domain NUT31_02015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NUT31_02015 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_02015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NUT31_02020 PF10371 Domain of unknown function NUT31_02020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NUT31_02020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NUT31_02020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NUT31_02020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NUT31_02045 PF01554 MatE NUT31_02065 PF00291 Pyridoxal-phosphate dependent enzyme NUT31_02075 PF00465 Iron-containing alcohol dehydrogenase NUT31_02085 PF08359 YsiA-like protein, C-terminal region NUT31_02085 PF00440 Bacterial regulatory proteins, tetR family NUT31_02090 PF00171 Aldehyde dehydrogenase family NUT31_02100 PF00877 NlpC/P60 family NUT31_02105 PF12563 Hemolytic toxin N terminal NUT31_02105 PF07968 Leukocidin/Hemolysin toxin family NUT31_02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_02110 PF03466 LysR substrate binding domain NUT31_02115 PF10417 C-terminal domain of 1-Cys peroxiredoxin NUT31_02115 PF00578 AhpC/TSA family NUT31_02140 PF08003 Protein of unknown function (DUF1698) NUT31_02145 PF13649 Methyltransferase domain NUT31_02150 PF01904 Protein of unknown function DUF72 NUT31_02155 PF01336 OB-fold nucleic acid binding domain NUT31_02155 PF02938 GAD domain NUT31_02155 PF00152 tRNA synthetases class II (D, K and N) NUT31_02160 PF01709 Transcriptional regulator NUT31_02165 PF08019 Phosphoethanolamine transferase EptA/EptB NUT31_02165 PF00884 Sulfatase NUT31_02170 PF01047 MarR family NUT31_02170 PF00480 ROK family NUT31_02175 PF01979 Amidohydrolase family NUT31_02180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NUT31_02185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NUT31_02185 PF00367 phosphotransferase system, EIIB NUT31_02185 PF02378 Phosphotransferase system, EIIC NUT31_02190 PF00728 Glycosyl hydrolase family 20, catalytic domain NUT31_02190 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NUT31_02190 PF02838 Glycosyl hydrolase family 20, domain 2 NUT31_02190 PF03173 Putative carbohydrate binding domain NUT31_02195 PF00749 tRNA synthetases class I (E and Q), catalytic domain NUT31_02195 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NUT31_02200 PF01475 Ferric uptake regulator family NUT31_02210 PF00258 Flavodoxin NUT31_02215 PF01402 Ribbon-helix-helix protein, copG family NUT31_02225 PF12697 Alpha/beta hydrolase family NUT31_02230 PF17206 SeqA protein N-terminal domain NUT31_02230 PF03925 SeqA protein C-terminal domain NUT31_02235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NUT31_02235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NUT31_02235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NUT31_02235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NUT31_02245 PF01047 MarR family NUT31_02250 PF13406 Transglycosylase SLT domain NUT31_02255 PF01066 CDP-alcohol phosphatidyltransferase NUT31_02260 PF00005 ABC transporter NUT31_02270 PF13416 Bacterial extracellular solute-binding protein NUT31_02275 PF00403 Heavy-metal-associated domain NUT31_02275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NUT31_02275 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_02280 PF02627 Carboxymuconolactone decarboxylase family NUT31_02290 PF01625 Peptide methionine sulfoxide reductase NUT31_02305 PF01103 Surface antigen NUT31_02305 PF07244 Surface antigen variable number repeat NUT31_02305 PF17243 POTRA domain TamA domain 1 NUT31_02310 PF04357 TamB, inner membrane protein subunit of TAM complex NUT31_02330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NUT31_02335 PF00563 EAL domain NUT31_02335 PF03707 Bacterial signalling protein N terminal repeat NUT31_02335 PF00990 Diguanylate cyclase, GGDEF domain NUT31_02340 PF14718 Soluble lytic murein transglycosylase L domain NUT31_02340 PF01464 Transglycosylase SLT domain NUT31_02345 PF00356 Bacterial regulatory proteins, lacI family NUT31_02355 PF03061 Thioesterase superfamily NUT31_02365 PF03372 Endonuclease/Exonuclease/phosphatase family NUT31_02370 PF01476 LysM domain NUT31_02370 PF01464 Transglycosylase SLT domain NUT31_02375 PF16123 Hydroxyacylglutathione hydrolase C-terminus NUT31_02375 PF00753 Metallo-beta-lactamase superfamily NUT31_02380 PF08241 Methyltransferase domain NUT31_02385 PF00075 RNase H NUT31_02390 PF00929 Exonuclease NUT31_02400 PF11849 Domain of unknown function (DUF3369) NUT31_02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUT31_02405 PF02770 Acyl-CoA dehydrogenase, middle domain NUT31_02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUT31_02405 PF09317 Domain of unknown function (DUF1974) NUT31_02410 PF13580 SIS domain NUT31_02415 PF13230 Glutamine amidotransferases class-II NUT31_02425 PF01933 Uncharacterised protein family UPF0052 NUT31_02435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_02435 PF00512 His Kinase A (phospho-acceptor) domain NUT31_02435 PF09456 RcsC Alpha-Beta-Loop (ABL) NUT31_02435 PF00072 Response regulator receiver domain NUT31_02445 PF00196 Bacterial regulatory proteins, luxR family NUT31_02445 PF00072 Response regulator receiver domain NUT31_02450 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NUT31_02450 PF00672 HAMP domain NUT31_02450 PF07730 Histidine kinase NUT31_02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_02455 PF04055 Radical SAM superfamily NUT31_02455 PF06463 Molybdenum Cofactor Synthesis C NUT31_02460 PF13187 4Fe-4S dicluster domain NUT31_02460 PF12800 4Fe-4S binding domain NUT31_02460 PF00037 4Fe-4S binding domain NUT31_02470 PF01568 Molydopterin dinucleotide binding domain NUT31_02470 PF10518 TAT (twin-arginine translocation) pathway signal sequence NUT31_02470 PF00384 Molybdopterin oxidoreductase NUT31_02470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NUT31_02475 PF12838 4Fe-4S dicluster domain NUT31_02475 PF12800 4Fe-4S binding domain NUT31_02480 PF13237 4Fe-4S dicluster domain NUT31_02480 PF12801 4Fe-4S binding domain NUT31_02485 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NUT31_02490 PF03264 NapC/NirT cytochrome c family, N-terminal region NUT31_02495 PF00994 Probable molybdopterin binding domain NUT31_02500 PF01967 MoaC family NUT31_02505 PF02597 ThiS family NUT31_02510 PF02391 MoaE protein NUT31_02520 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_02525 PF00005 ABC transporter NUT31_02525 PF03459 TOBE domain NUT31_02530 PF00561 alpha/beta hydrolase fold NUT31_02535 PF00899 ThiF family NUT31_02540 PF03453 MoeA N-terminal region (domain I and II) NUT31_02540 PF03454 MoeA C-terminal region (domain IV) NUT31_02540 PF00994 Probable molybdopterin binding domain NUT31_02545 PF01227 GTP cyclohydrolase I NUT31_02550 PF00672 HAMP domain NUT31_02550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_02550 PF17200 Single Cache domain 2 NUT31_02555 PF01268 Formate--tetrahydrofolate ligase NUT31_02565 PF03466 LysR substrate binding domain NUT31_02565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_02570 PF04264 YceI-like domain NUT31_02595 PF07687 Peptidase dimerisation domain NUT31_02595 PF01546 Peptidase family M20/M25/M40 NUT31_02605 PF17810 Arginine decarboxylase helical bundle domain NUT31_02605 PF17944 Arginine decarboxylase C-terminal helical extension NUT31_02605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NUT31_02620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_02620 PF00672 HAMP domain NUT31_02630 PF01042 Endoribonuclease L-PSP NUT31_02635 PF03313 Serine dehydratase alpha chain NUT31_02640 PF13309 HTH domain NUT31_02640 PF08348 YheO-like PAS domain NUT31_02645 PF00300 Histidine phosphatase superfamily (branch 1) NUT31_02650 PF01844 HNH endonuclease NUT31_02660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUT31_02685 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NUT31_02685 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NUT31_02690 PF00849 RNA pseudouridylate synthase NUT31_02690 PF01479 S4 domain NUT31_02695 PF09009 Exotoxin A catalytic NUT31_02695 PF09102 Exotoxin A, targeting NUT31_02695 PF09101 Exotoxin A binding NUT31_02700 PF07690 Major Facilitator Superfamily NUT31_02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_02710 PF03466 LysR substrate binding domain NUT31_02715 PF07690 Major Facilitator Superfamily NUT31_02725 PF10689 Protein of unknown function (DUF2496) NUT31_02740 PF04391 Protein of unknown function (DUF533) NUT31_02755 PF00155 Aminotransferase class I and II NUT31_02755 PF00392 Bacterial regulatory proteins, gntR family NUT31_02760 PF01654 Cytochrome bd terminal oxidase subunit I NUT31_02765 PF02322 Cytochrome bd terminal oxidase subunit II NUT31_02775 PF07690 Major Facilitator Superfamily NUT31_02780 PF00248 Aldo/keto reductase family NUT31_02805 PF03466 LysR substrate binding domain NUT31_02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_02810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NUT31_02810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NUT31_02815 PF00230 Major intrinsic protein NUT31_02820 PF07690 Major Facilitator Superfamily NUT31_02825 PF00455 DeoR C terminal sensor domain NUT31_02825 PF08220 DeoR-like helix-turn-helix domain NUT31_02835 PF01266 FAD dependent oxidoreductase NUT31_02835 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NUT31_02840 PF03009 Glycerophosphoryl diester phosphodiesterase family NUT31_02845 PF00793 DAHP synthetase I family NUT31_02850 PF01817 Chorismate mutase type II NUT31_02850 PF02153 Prephenate dehydrogenase NUT31_02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_02855 PF03466 LysR substrate binding domain NUT31_02860 PF04219 Protein of unknown function, DUF NUT31_02865 PF03974 Ecotin NUT31_02885 PF00326 Prolyl oligopeptidase family NUT31_02885 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NUT31_02890 PF07715 TonB-dependent Receptor Plug Domain NUT31_02890 PF00593 TonB dependent receptor NUT31_02895 PF11893 Domain of unknown function (DUF3413) NUT31_02895 PF00884 Sulfatase NUT31_02900 PF07208 Protein of unknown function (DUF1414) NUT31_02905 PF04245 37-kD nucleoid-associated bacterial protein NUT31_02910 PF01547 Bacterial extracellular solute-binding protein NUT31_02915 PF14785 Maltose transport system permease protein MalF P2 domain NUT31_02915 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_02920 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_02925 PF00005 ABC transporter NUT31_02925 PF08402 TOBE domain NUT31_02930 PF03976 Polyphosphate kinase 2 (PPK2) NUT31_02935 PF00561 alpha/beta hydrolase fold NUT31_02945 PF01594 AI-2E family transporter NUT31_02950 PF01206 Sulfurtransferase TusA NUT31_02955 PF13181 Tetratricopeptide repeat NUT31_02955 PF01435 Peptidase family M48 NUT31_02960 PF00578 AhpC/TSA family NUT31_02965 PF03960 ArsC family NUT31_02980 PF04336 Acyl carrier protein phosphodiesterase NUT31_02985 PF01979 Amidohydrolase family NUT31_02990 PF03956 Lysine exporter LysO NUT31_02995 PF00005 ABC transporter NUT31_03000 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_03005 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_03010 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_03015 PF05159 Capsule polysaccharide biosynthesis protein NUT31_03020 PF05159 Capsule polysaccharide biosynthesis protein NUT31_03025 PF02709 N-terminal domain of galactosyltransferase NUT31_03025 PF00535 Glycosyl transferase family 2 NUT31_03030 PF00483 Nucleotidyl transferase NUT31_03045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NUT31_03045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NUT31_03045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NUT31_03050 PF02350 UDP-N-acetylglucosamine 2-epimerase NUT31_03060 PF02563 Polysaccharide biosynthesis/export protein NUT31_03060 PF10531 SLBB domain NUT31_03070 PF00005 ABC transporter NUT31_03075 PF01061 ABC-2 type transporter NUT31_03090 PF04055 Radical SAM superfamily NUT31_03095 PF00563 EAL domain NUT31_03095 PF00990 Diguanylate cyclase, GGDEF domain NUT31_03095 PF03707 Bacterial signalling protein N terminal repeat NUT31_03100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_03100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NUT31_03105 PF07703 Alpha-2-macroglobulin bait region domain NUT31_03105 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NUT31_03105 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NUT31_03105 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NUT31_03105 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NUT31_03105 PF17962 Bacterial macroglobulin domain 6 NUT31_03105 PF01835 MG2 domain NUT31_03105 PF07678 A-macroglobulin TED domain NUT31_03105 PF00207 Alpha-2-macroglobulin family NUT31_03110 PF00912 Transglycosylase NUT31_03110 PF00905 Penicillin binding protein transpeptidase domain NUT31_03110 PF06832 Penicillin-Binding Protein C-terminus Family NUT31_03120 PF02568 Thiamine biosynthesis protein (ThiI) NUT31_03120 PF02926 THUMP domain NUT31_03130 PF03458 UPF0126 domain NUT31_03135 PF00669 Bacterial flagellin N-terminal helical region NUT31_03135 PF00700 Bacterial flagellin C-terminal helical region NUT31_03140 PF07196 Flagellin hook IN motif NUT31_03140 PF00669 Bacterial flagellin N-terminal helical region NUT31_03140 PF00700 Bacterial flagellin C-terminal helical region NUT31_03150 PF02465 Flagellar hook-associated protein 2 N-terminus NUT31_03150 PF07196 Flagellin hook IN motif NUT31_03150 PF07195 Flagellar hook-associated protein 2 C-terminus NUT31_03155 PF02561 Flagellar protein FliS NUT31_03170 PF01497 Periplasmic binding protein NUT31_03180 PF01048 Phosphorylase superfamily NUT31_03190 PF02535 ZIP Zinc transporter NUT31_03195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_03195 PF00672 HAMP domain NUT31_03195 PF12729 Four helix bundle sensory module for signal transduction NUT31_03200 PF00459 Inositol monophosphatase family NUT31_03210 PF02798 Glutathione S-transferase, N-terminal domain NUT31_03210 PF00043 Glutathione S-transferase, C-terminal domain NUT31_03215 PF07690 Major Facilitator Superfamily NUT31_03225 PF05164 Cell division protein ZapA NUT31_03230 PF03695 Uncharacterised protein family (UPF0149) NUT31_03235 PF01494 FAD binding domain NUT31_03240 PF01494 FAD binding domain NUT31_03245 PF08669 Glycine cleavage T-protein C-terminal barrel domain NUT31_03245 PF01571 Aminomethyltransferase folate-binding domain NUT31_03250 PF01597 Glycine cleavage H-protein NUT31_03255 PF02347 Glycine cleavage system P-protein NUT31_03260 PF01022 Bacterial regulatory protein, arsR family NUT31_03265 PF01758 Sodium Bile acid symporter family NUT31_03270 PF03960 ArsC family NUT31_03275 PF08241 Methyltransferase domain NUT31_03285 PF00989 PAS fold NUT31_03285 PF00512 His Kinase A (phospho-acceptor) domain NUT31_03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_03290 PF07690 Major Facilitator Superfamily NUT31_03295 PF13192 Thioredoxin domain NUT31_03295 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_03300 PF00578 AhpC/TSA family NUT31_03300 PF10417 C-terminal domain of 1-Cys peroxiredoxin NUT31_03305 PF00571 CBS domain NUT31_03310 PF02547 Queuosine biosynthesis protein NUT31_03315 PF01702 Queuine tRNA-ribosyltransferase NUT31_03320 PF02699 Preprotein translocase subunit NUT31_03325 PF02355 Protein export membrane protein NUT31_03325 PF07549 SecD/SecF GG Motif NUT31_03325 PF13721 SecD export protein N-terminal TM region NUT31_03330 PF07549 SecD/SecF GG Motif NUT31_03330 PF02355 Protein export membrane protein NUT31_03340 PF07719 Tetratricopeptide repeat NUT31_03340 PF13181 Tetratricopeptide repeat NUT31_03345 PF01136 Peptidase family U32 NUT31_03350 PF01136 Peptidase family U32 NUT31_03355 PF02036 SCP-2 sterol transfer family NUT31_03365 PF00588 SpoU rRNA Methylase family NUT31_03370 PF02082 Transcriptional regulator NUT31_03375 PF00266 Aminotransferase class-V NUT31_03380 PF01592 NifU-like N terminal domain NUT31_03385 PF01521 Iron-sulphur cluster biosynthesis NUT31_03390 PF07743 HSCB C-terminal oligomerisation domain NUT31_03395 PF00012 Hsp70 protein NUT31_03400 PF00111 2Fe-2S iron-sulfur cluster binding domain NUT31_03405 PF00883 Cytosol aminopeptidase family, catalytic domain NUT31_03405 PF12404 Peptidase NUT31_03410 PF00883 Cytosol aminopeptidase family, catalytic domain NUT31_03410 PF12404 Peptidase NUT31_03415 PF00334 Nucleoside diphosphate kinase NUT31_03420 PF04055 Radical SAM superfamily NUT31_03430 PF13464 Domain of unknown function (DUF4115) NUT31_03435 PF04551 GcpE protein NUT31_03440 PF13393 Histidyl-tRNA synthetase NUT31_03440 PF03129 Anticodon binding domain NUT31_03445 PF09976 Tetratricopeptide repeat-like domain NUT31_03450 PF13360 PQQ-like domain NUT31_03455 PF01926 50S ribosome-binding GTPase NUT31_03455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NUT31_03460 PF07191 zinc-ribbons NUT31_03465 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_03465 PF01464 Transglycosylase SLT domain NUT31_03470 PF02769 AIR synthase related protein, C-terminal domain NUT31_03470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NUT31_03470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NUT31_03475 PF00361 Proton-conducting membrane transporter NUT31_03480 PF00361 Proton-conducting membrane transporter NUT31_03485 PF00361 Proton-conducting membrane transporter NUT31_03485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NUT31_03490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NUT31_03495 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NUT31_03500 PF12838 4Fe-4S dicluster domain NUT31_03505 PF00146 NADH dehydrogenase NUT31_03510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NUT31_03510 PF00384 Molybdopterin oxidoreductase NUT31_03510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NUT31_03515 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NUT31_03515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NUT31_03525 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NUT31_03525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NUT31_03530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NUT31_03535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NUT31_03540 PF13677 Membrane MotB of proton-channel complex MotA/MotB NUT31_03540 PF00691 OmpA family NUT31_03545 PF01618 MotA/TolQ/ExbB proton channel family NUT31_03565 PF04536 TPM domain NUT31_03575 PF03411 Penicillin-insensitive murein endopeptidase NUT31_03585 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NUT31_03590 PF00248 Aldo/keto reductase family NUT31_03605 PF01212 Beta-eliminating lyase NUT31_03615 PF00072 Response regulator receiver domain NUT31_03620 PF03466 LysR substrate binding domain NUT31_03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_03630 PF03707 Bacterial signalling protein N terminal repeat NUT31_03630 PF00990 Diguanylate cyclase, GGDEF domain NUT31_03630 PF00563 EAL domain NUT31_03630 PF13188 PAS domain NUT31_03635 PF00881 Nitroreductase family NUT31_03650 PF07690 Major Facilitator Superfamily NUT31_03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_03655 PF03466 LysR substrate binding domain NUT31_03660 PF03466 LysR substrate binding domain NUT31_03660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_03665 PF00925 GTP cyclohydrolase II NUT31_03670 PF02224 Cytidylate kinase NUT31_03675 PF00575 S1 RNA binding domain NUT31_03680 PF00216 Bacterial DNA-binding protein NUT31_03690 PF18073 Rubredoxin metal binding domain NUT31_03695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NUT31_03710 PF06508 Queuosine biosynthesis protein QueC NUT31_03715 PF04055 Radical SAM superfamily NUT31_03720 PF12843 Putative quorum-sensing-regulated virulence factor NUT31_03725 PF01923 Cobalamin adenosyltransferase NUT31_03730 PF00816 H-NS histone family NUT31_03735 PF03553 Na+/H+ antiporter family NUT31_03740 PF00265 Thymidine kinase NUT31_03750 PF10722 Putative bacterial sensory transduction regulator NUT31_03765 PF05638 Type VI secretion system effector, Hcp NUT31_03770 PF04717 Type VI secretion system, phage-baseplate injector NUT31_03800 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NUT31_03810 PF05947 Type VI secretion system, TssF NUT31_03830 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NUT31_03840 PF10431 C-terminal, D2-small domain, of ClpB protein NUT31_03840 PF17871 AAA lid domain NUT31_03840 PF07724 AAA domain (Cdc48 subfamily) NUT31_03840 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_03845 PF00158 Sigma-54 interaction domain NUT31_03845 PF02954 Bacterial regulatory protein, Fis family NUT31_03860 PF06761 Intracellular multiplication and human macrophage-killing NUT31_03860 PF06744 Type VI secretion protein IcmF C-terminal NUT31_03860 PF14331 ImcF-related N-terminal domain NUT31_03875 PF04717 Type VI secretion system, phage-baseplate injector NUT31_03920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NUT31_03920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NUT31_03925 PF00313 'Cold-shock' DNA-binding domain NUT31_03930 PF02617 ATP-dependent Clp protease adaptor protein ClpS NUT31_03935 PF17871 AAA lid domain NUT31_03935 PF07724 AAA domain (Cdc48 subfamily) NUT31_03935 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_03935 PF02861 Clp amino terminal domain, pathogenicity island component NUT31_03935 PF10431 C-terminal, D2-small domain, of ClpB protein NUT31_03940 PF01176 Translation initiation factor 1A / IF-1 NUT31_03945 PF04376 Arginine-tRNA-protein transferase, N terminus NUT31_03945 PF04377 Arginine-tRNA-protein transferase, C terminus NUT31_03950 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NUT31_03955 PF05433 Glycine zipper 2TM domain NUT31_03960 PF17158 Membrane-associated sensor, integral membrane domain NUT31_03960 PF00990 Diguanylate cyclase, GGDEF domain NUT31_03965 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_03970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NUT31_03970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NUT31_03975 PF01037 Lrp/AsnC ligand binding domain NUT31_03980 PF09397 Ftsk gamma domain NUT31_03980 PF01580 FtsK/SpoIIIE family NUT31_03980 PF17854 FtsK alpha domain NUT31_03980 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NUT31_03985 PF03548 Outer membrane lipoprotein carrier protein LolA NUT31_03990 PF12002 MgsA AAA+ ATPase C terminal NUT31_03990 PF16193 AAA C-terminal domain NUT31_03990 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_03995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NUT31_03995 PF02403 Seryl-tRNA synthetase N-terminal domain NUT31_04000 PF02674 Colicin V production protein NUT31_04005 PF00156 Phosphoribosyl transferase domain NUT31_04010 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NUT31_04015 PF00005 ABC transporter NUT31_04020 PF00005 ABC transporter NUT31_04020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NUT31_04025 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_04025 PF12911 N-terminal TM domain of oligopeptide transport permease C NUT31_04030 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_04035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_04040 PF02954 Bacterial regulatory protein, Fis family NUT31_04040 PF00158 Sigma-54 interaction domain NUT31_04045 PF04012 PspA/IM30 family NUT31_04050 PF06667 Phage shock protein B NUT31_04060 PF04317 YcjX-like family, DUF463 NUT31_04065 PF05128 Domain of unknown function (DUF697) NUT31_04070 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NUT31_04075 PF01329 Pterin 4 alpha carbinolamine dehydratase NUT31_04080 PF00158 Sigma-54 interaction domain NUT31_04080 PF18024 Helix-turn-helix domain NUT31_04085 PF13689 YfiR/HmsC-like NUT31_04090 PF17152 Periplasmic sensor domain NUT31_04090 PF00990 Diguanylate cyclase, GGDEF domain NUT31_04095 PF00691 OmpA family NUT31_04100 PF03741 Integral membrane protein TerC family NUT31_04110 PF08891 YfcL protein NUT31_04115 PF00501 AMP-binding enzyme NUT31_04120 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NUT31_04120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NUT31_04125 PF04172 LrgB-like family NUT31_04130 PF03788 LrgA family NUT31_04145 PF08411 Exonuclease C-terminal NUT31_04145 PF00929 Exonuclease NUT31_04160 PF00764 Arginosuccinate synthase NUT31_04180 PF10431 C-terminal, D2-small domain, of ClpB protein NUT31_04180 PF02861 Clp amino terminal domain, pathogenicity island component NUT31_04180 PF17871 AAA lid domain NUT31_04180 PF07724 AAA domain (Cdc48 subfamily) NUT31_04180 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_04195 PF02811 PHP domain NUT31_04220 PF02146 Sir2 family NUT31_04290 PF02661 Fic/DOC family NUT31_04300 PF02610 L-arabinose isomerase NUT31_04300 PF11762 L-arabinose isomerase C-terminal domain NUT31_04305 PF00596 Class II Aldolase and Adducin N-terminal domain NUT31_04310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NUT31_04315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NUT31_04320 PF00005 ABC transporter NUT31_04325 PF02653 Branched-chain amino acid transport system / permease component NUT31_04330 PF02311 AraC-like ligand binding domain NUT31_04330 PF12833 Helix-turn-helix domain NUT31_04335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_04335 PF03466 LysR substrate binding domain NUT31_04340 PF05726 Pirin C-terminal cupin domain NUT31_04340 PF02678 Pirin NUT31_04345 PF00444 Ribosomal protein L36 NUT31_04350 PF01197 Ribosomal protein L31 NUT31_04365 PF01863 Protein of unknown function DUF45 NUT31_04380 PF03606 C4-dicarboxylate anaerobic carrier NUT31_04390 PF01266 FAD dependent oxidoreductase NUT31_04390 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NUT31_04395 PF02801 Beta-ketoacyl synthase, C-terminal domain NUT31_04395 PF00109 Beta-ketoacyl synthase, N-terminal domain NUT31_04410 PF00285 Citrate synthase, C-terminal domain NUT31_04415 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NUT31_04420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NUT31_04425 PF02910 Fumarate reductase flavoprotein C-term NUT31_04425 PF00890 FAD binding domain NUT31_04430 PF13085 2Fe-2S iron-sulfur cluster binding domain NUT31_04435 PF02779 Transketolase, pyrimidine binding domain NUT31_04435 PF16870 2-oxoglutarate dehydrogenase C-terminal NUT31_04435 PF16078 2-oxoglutarate dehydrogenase N-terminus NUT31_04435 PF00676 Dehydrogenase E1 component NUT31_04440 PF02817 e3 binding domain NUT31_04440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NUT31_04440 PF00364 Biotin-requiring enzyme NUT31_04445 PF08442 ATP-grasp domain NUT31_04445 PF00549 CoA-ligase NUT31_04450 PF02629 CoA binding domain NUT31_04450 PF00549 CoA-ligase NUT31_04460 PF03692 Putative zinc- or iron-chelating domain NUT31_04465 PF01266 FAD dependent oxidoreductase NUT31_04470 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_04475 PF00005 ABC transporter NUT31_04485 PF00392 Bacterial regulatory proteins, gntR family NUT31_04485 PF07702 UTRA domain NUT31_04490 PF00266 Aminotransferase class-V NUT31_04495 PF00202 Aminotransferase class-III NUT31_04505 PF01228 Glycine radical NUT31_04505 PF02901 Pyruvate formate lyase-like NUT31_04510 PF01226 Formate/nitrite transporter NUT31_04515 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NUT31_04515 PF18381 YcaO cyclodehydratase C-terminal domain NUT31_04520 PF00893 Small Multidrug Resistance protein NUT31_04525 PF01118 Semialdehyde dehydrogenase, NAD binding domain NUT31_04525 PF02774 Semialdehyde dehydrogenase, dimerisation domain NUT31_04530 PF00675 Insulinase (Peptidase family M16) NUT31_04530 PF05193 Peptidase M16 inactive domain NUT31_04535 PF01053 Cys/Met metabolism PLP-dependent enzyme NUT31_04545 PF13460 NAD(P)H-binding NUT31_04550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_04550 PF03466 LysR substrate binding domain NUT31_04555 PF00106 short chain dehydrogenase NUT31_04560 PF12833 Helix-turn-helix domain NUT31_04565 PF07715 TonB-dependent Receptor Plug Domain NUT31_04565 PF00593 TonB dependent receptor NUT31_04575 PF03466 LysR substrate binding domain NUT31_04575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_04580 PF08267 Cobalamin-independent synthase, N-terminal domain NUT31_04580 PF01717 Cobalamin-independent synthase, Catalytic domain NUT31_04590 PF00478 IMP dehydrogenase / GMP reductase domain NUT31_04590 PF00571 CBS domain NUT31_04595 PF07969 Amidohydrolase family NUT31_04605 PF01266 FAD dependent oxidoreductase NUT31_04610 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NUT31_04620 PF01212 Beta-eliminating lyase NUT31_04625 PF00768 D-alanyl-D-alanine carboxypeptidase NUT31_04630 PF00293 NUDIX domain NUT31_04635 PF03918 Cytochrome C biogenesis protein NUT31_04640 PF08534 Redoxin NUT31_04645 PF01578 Cytochrome C assembly protein NUT31_04645 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NUT31_04650 PF03916 Polysulphide reductase, NrfD NUT31_04655 PF13247 4Fe-4S dicluster domain NUT31_04655 PF00037 4Fe-4S binding domain NUT31_04660 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NUT31_04660 PF13435 Cytochrome c554 and c-prime NUT31_04665 PF02335 Cytochrome c552 NUT31_04670 PF13183 4Fe-4S dicluster domain NUT31_04670 PF02754 Cysteine-rich domain NUT31_04675 PF00890 FAD binding domain NUT31_04680 PF04324 BFD-like [2Fe-2S] binding domain NUT31_04680 PF01266 FAD dependent oxidoreductase NUT31_04685 PF02810 SEC-C motif NUT31_04690 PF17200 Single Cache domain 2 NUT31_04690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_04690 PF00672 HAMP domain NUT31_04695 PF01047 MarR family NUT31_04695 PF00480 ROK family NUT31_04700 PF00989 PAS fold NUT31_04700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_04700 PF17203 Single cache domain 3 NUT31_04700 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NUT31_04705 PF12431 Transcriptional regulator NUT31_04705 PF08279 HTH domain NUT31_04705 PF00072 Response regulator receiver domain NUT31_04710 PF01970 Tripartite tricarboxylate transporter TctA family NUT31_04725 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_04725 PF01464 Transglycosylase SLT domain NUT31_04730 PF06826 Predicted Permease Membrane Region NUT31_04730 PF02080 TrkA-C domain NUT31_04740 PF00271 Helicase conserved C-terminal domain NUT31_04740 PF04851 Type III restriction enzyme, res subunit NUT31_04740 PF02151 UvrB/uvrC motif NUT31_04740 PF12344 Ultra-violet resistance protein B NUT31_04740 PF17757 UvrB interaction domain NUT31_04750 PF09335 SNARE associated Golgi protein NUT31_04755 PF02600 Disulfide bond formation protein DsbB NUT31_04760 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NUT31_04765 PF00392 Bacterial regulatory proteins, gntR family NUT31_04765 PF07840 FadR C-terminal domain NUT31_04770 PF04293 SpoVR like protein NUT31_04775 PF04285 Protein of unknown function (DUF444) NUT31_04780 PF08298 PrkA AAA domain NUT31_04780 PF06798 PrkA serine protein kinase C-terminal domain NUT31_04785 PF00270 DEAD/DEAH box helicase NUT31_04785 PF00271 Helicase conserved C-terminal domain NUT31_04785 PF00570 HRDC domain NUT31_04785 PF16124 RecQ zinc-binding NUT31_04785 PF09382 RQC domain NUT31_04790 PF00375 Sodium:dicarboxylate symporter family NUT31_04795 PF03222 Tryptophan/tyrosine permease family NUT31_04800 PF00293 NUDIX domain NUT31_04805 PF00425 chorismate binding enzyme NUT31_04805 PF04715 Anthranilate synthase component I, N terminal region NUT31_04825 PF00343 Carbohydrate phosphorylase NUT31_04830 PF00939 Sodium:sulfate symporter transmembrane region NUT31_04835 PF00085 Thioredoxin NUT31_04840 PF01627 Hpt domain NUT31_04840 PF00512 His Kinase A (phospho-acceptor) domain NUT31_04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_04840 PF00672 HAMP domain NUT31_04840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NUT31_04840 PF00072 Response regulator receiver domain NUT31_04845 PF00664 ABC transporter transmembrane region NUT31_04845 PF00005 ABC transporter NUT31_04850 PF00664 ABC transporter transmembrane region NUT31_04850 PF00005 ABC transporter NUT31_04870 PF01575 MaoC like domain NUT31_04875 PF00561 alpha/beta hydrolase fold NUT31_04875 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NUT31_04900 PF08543 Phosphomethylpyrimidine kinase NUT31_04905 PF03992 Antibiotic biosynthesis monooxygenase NUT31_04910 PF00465 Iron-containing alcohol dehydrogenase NUT31_04915 PF00583 Acetyltransferase (GNAT) family NUT31_04925 PF01928 CYTH domain NUT31_04935 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NUT31_04945 PF13673 Acetyltransferase (GNAT) domain NUT31_04950 PF00270 DEAD/DEAH box helicase NUT31_04950 PF00271 Helicase conserved C-terminal domain NUT31_04955 PF00255 Glutathione peroxidase NUT31_04965 PF07478 D-ala D-ala ligase C-terminus NUT31_04965 PF01820 D-ala D-ala ligase N-terminus NUT31_04970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUT31_04970 PF18029 Glyoxalase-like domain NUT31_04975 PF03942 DTW domain NUT31_04980 PF01925 Sulfite exporter TauE/SafE NUT31_04985 PF03466 LysR substrate binding domain NUT31_04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_04995 PF02311 AraC-like ligand binding domain NUT31_04995 PF12833 Helix-turn-helix domain NUT31_05005 PF11398 Protein of unknown function (DUF2813) NUT31_05015 PF00128 Alpha amylase, catalytic domain NUT31_05015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUT31_05055 PF02789 Cytosol aminopeptidase family, N-terminal domain NUT31_05055 PF00883 Cytosol aminopeptidase family, catalytic domain NUT31_05060 PF13419 Haloacid dehalogenase-like hydrolase NUT31_05065 PF07687 Peptidase dimerisation domain NUT31_05065 PF01546 Peptidase family M20/M25/M40 NUT31_05070 PF00365 Phosphofructokinase NUT31_05075 PF00121 Triosephosphate isomerase NUT31_05080 PF02698 DUF218 domain NUT31_05085 PF13847 Methyltransferase domain NUT31_05090 PF03882 MukF winged-helix domain NUT31_05090 PF17193 MukF C-terminal domain NUT31_05090 PF17192 MukF middle domain NUT31_05095 PF04288 MukE-like family NUT31_05100 PF16330 MukB hinge domain NUT31_05100 PF04310 MukB N-terminal NUT31_05105 PF05036 Sporulation related domain NUT31_05105 PF03330 Lytic transglycolase NUT31_05115 PF01327 Polypeptide deformylase NUT31_05155 PF08274 PhnA Zinc-Ribbon NUT31_05155 PF03831 PhnA domain NUT31_05165 PF00574 Clp protease NUT31_05175 PF08329 Chitinase A, N-terminal domain NUT31_05175 PF00704 Glycosyl hydrolases family 18 NUT31_05195 PF00990 Diguanylate cyclase, GGDEF domain NUT31_05195 PF08448 PAS fold NUT31_05205 PF01713 Smr domain NUT31_05210 PF05175 Methyltransferase small domain NUT31_05215 PF01264 Chorismate synthase NUT31_05225 PF00271 Helicase conserved C-terminal domain NUT31_05225 PF00270 DEAD/DEAH box helicase NUT31_05240 PF03222 Tryptophan/tyrosine permease family NUT31_05245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NUT31_05245 PF00356 Bacterial regulatory proteins, lacI family NUT31_05250 PF00381 PTS HPr component phosphorylation site NUT31_05250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUT31_05255 PF00294 pfkB family carbohydrate kinase NUT31_05260 PF02378 Phosphotransferase system, EIIC NUT31_05260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NUT31_05265 PF06560 Glucose-6-phosphate isomerase (GPI) NUT31_05270 PF00356 Bacterial regulatory proteins, lacI family NUT31_05270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NUT31_05285 PF03830 PTS system sorbose subfamily IIB component NUT31_05285 PF03610 PTS system fructose IIA component NUT31_05290 PF03609 PTS system sorbose-specific iic component NUT31_05295 PF03613 PTS system mannose/fructose/sorbose family IID component NUT31_05305 PF06945 Protein of unknown function (DUF1289) NUT31_05310 PF03562 MltA specific insert domain NUT31_05310 PF06725 3D domain NUT31_05315 PF00111 2Fe-2S iron-sulfur cluster binding domain NUT31_05320 PF00268 Ribonucleotide reductase, small chain NUT31_05325 PF00317 Ribonucleotide reductase, all-alpha domain NUT31_05325 PF02867 Ribonucleotide reductase, barrel domain NUT31_05325 PF03477 ATP cone domain NUT31_05330 PF13419 Haloacid dehalogenase-like hydrolase NUT31_05340 PF03989 DNA gyrase C-terminal domain, beta-propeller NUT31_05340 PF00521 DNA gyrase/topoisomerase IV, subunit A NUT31_05350 PF04055 Radical SAM superfamily NUT31_05360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NUT31_05360 PF02824 TGS domain NUT31_05360 PF03129 Anticodon binding domain NUT31_05360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NUT31_05365 PF00707 Translation initiation factor IF-3, C-terminal domain NUT31_05365 PF05198 Translation initiation factor IF-3, N-terminal domain NUT31_05370 PF01632 Ribosomal protein L35 NUT31_05375 PF00453 Ribosomal protein L20 NUT31_05380 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NUT31_05380 PF01409 tRNA synthetases class II core domain (F) NUT31_05385 PF03483 B3/4 domain NUT31_05385 PF03484 tRNA synthetase B5 domain NUT31_05385 PF03147 Ferredoxin-fold anticodon binding domain NUT31_05385 PF01588 Putative tRNA binding domain NUT31_05385 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NUT31_05390 PF00216 Bacterial DNA-binding protein NUT31_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_05395 PF00512 His Kinase A (phospho-acceptor) domain NUT31_05395 PF09456 RcsC Alpha-Beta-Loop (ABL) NUT31_05395 PF00072 Response regulator receiver domain NUT31_05420 PF00563 EAL domain NUT31_05420 PF00990 Diguanylate cyclase, GGDEF domain NUT31_05420 PF03707 Bacterial signalling protein N terminal repeat NUT31_05425 PF00356 Bacterial regulatory proteins, lacI family NUT31_05430 PF00294 pfkB family carbohydrate kinase NUT31_05435 PF13407 Periplasmic binding protein domain NUT31_05440 PF02653 Branched-chain amino acid transport system / permease component NUT31_05445 PF00005 ABC transporter NUT31_05450 PF05025 RbsD / FucU transport protein family NUT31_05455 PF13417 Glutathione S-transferase, N-terminal domain NUT31_05470 PF01171 PP-loop family NUT31_05475 PF00582 Universal stress protein family NUT31_05480 PF00027 Cyclic nucleotide-binding domain NUT31_05480 PF13545 Crp-like helix-turn-helix domain NUT31_05495 PF00403 Heavy-metal-associated domain NUT31_05505 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NUT31_05505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NUT31_05520 PF00115 Cytochrome C and Quinol oxidase polypeptide I NUT31_05530 PF13185 GAF domain NUT31_05535 PF04352 ProQ/FINO family NUT31_05535 PF17516 ProQ C-terminal domain NUT31_05540 PF11818 C-terminal domain of tail specific protease (DUF3340) NUT31_05540 PF00595 PDZ domain NUT31_05540 PF03572 Peptidase family S41 NUT31_05540 PF17804 Tail specific protease N-terminal domain NUT31_05545 PF11940 Domain of unknown function (DUF3458) Ig-like fold NUT31_05545 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NUT31_05545 PF01433 Peptidase family M1 domain NUT31_05555 PF05088 Bacterial NAD-glutamate dehydrogenase NUT31_05560 PF01180 Dihydroorotate dehydrogenase NUT31_05565 PF07126 Cell-division protein ZapC NUT31_05570 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP NUT31_05575 PF10672 S-adenosylmethionine-dependent methyltransferase NUT31_05575 PF02926 THUMP domain NUT31_05575 PF01170 Putative RNA methylase family UPF0020 NUT31_05585 PF16326 ABC transporter C-terminal domain NUT31_05585 PF12848 ABC transporter NUT31_05585 PF00005 ABC transporter NUT31_05595 PF04957 Ribosome modulation factor NUT31_05600 PF07977 FabA-like domain NUT31_05605 PF05362 Lon protease (S16) C-terminal proteolytic domain NUT31_05605 PF13654 AAA domain NUT31_05640 PF10734 Protein of unknown function (DUF2523) NUT31_05645 PF05707 Zonular occludens toxin (Zot) NUT31_05665 PF07130 YebG protein NUT31_05675 PF00106 short chain dehydrogenase NUT31_05700 PF06974 Protein of unknown function (DUF1298) NUT31_05700 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NUT31_05715 PF03972 MmgE/PrpD family NUT31_05720 PF00285 Citrate synthase, C-terminal domain NUT31_05735 PF04403 Paraquat-inducible protein A NUT31_05740 PF02470 MlaD protein NUT31_05745 PF01189 16S rRNA methyltransferase RsmB/F NUT31_05745 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NUT31_05745 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NUT31_05755 PF00589 Phage integrase family NUT31_05760 PF01026 TatD related DNase NUT31_05765 PF09115 DNA polymerase III, delta subunit, C terminal NUT31_05770 PF02223 Thymidylate kinase NUT31_05775 PF02618 YceG-like family NUT31_05780 PF01063 Amino-transferase class IV NUT31_05785 PF00109 Beta-ketoacyl synthase, N-terminal domain NUT31_05785 PF02801 Beta-ketoacyl synthase, C-terminal domain NUT31_05790 PF00550 Phosphopantetheine attachment site NUT31_05800 PF00698 Acyl transferase domain NUT31_05805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NUT31_05805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NUT31_05810 PF02504 Fatty acid synthesis protein NUT31_05815 PF01783 Ribosomal L32p protein family NUT31_05820 PF02620 Large ribosomal RNA subunit accumulation protein YceD NUT31_05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_05830 PF03466 LysR substrate binding domain NUT31_05835 PF07690 Major Facilitator Superfamily NUT31_05840 PF02545 Maf-like protein NUT31_05845 PF13419 Haloacid dehalogenase-like hydrolase NUT31_05850 PF00849 RNA pseudouridylate synthase NUT31_05850 PF01479 S4 domain NUT31_05855 PF00575 S1 RNA binding domain NUT31_05855 PF12111 Polyribonucleotide phosphorylase C terminal NUT31_05855 PF10150 Ribonuclease E/G family NUT31_05860 PF01384 Phosphate transporter family NUT31_05865 PF00692 dUTPase NUT31_05870 PF00485 Phosphoribulokinase / Uridine kinase family NUT31_05875 PF10609 NUBPL iron-transfer P-loop NTPase NUT31_05880 PF01588 Putative tRNA binding domain NUT31_05880 PF09334 tRNA synthetases class I (M) NUT31_05880 PF08264 Anticodon-binding domain of tRNA NUT31_05885 PF00043 Glutathione S-transferase, C-terminal domain NUT31_05885 PF02798 Glutathione S-transferase, N-terminal domain NUT31_05890 PF00708 Acylphosphatase NUT31_05895 PF12729 Four helix bundle sensory module for signal transduction NUT31_05895 PF00672 HAMP domain NUT31_05895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_05900 PF10672 S-adenosylmethionine-dependent methyltransferase NUT31_05900 PF17785 PUA-like domain NUT31_05915 PF00586 AIR synthase related protein, N-terminal domain NUT31_05915 PF02769 AIR synthase related protein, C-terminal domain NUT31_05925 PF00753 Metallo-beta-lactamase superfamily NUT31_05930 PF00072 Response regulator receiver domain NUT31_05935 PF00072 Response regulator receiver domain NUT31_05935 PF01627 Hpt domain NUT31_05935 PF00512 His Kinase A (phospho-acceptor) domain NUT31_05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_05935 PF00672 HAMP domain NUT31_05935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NUT31_05940 PF01386 Ribosomal L25p family NUT31_05950 PF00270 DEAD/DEAH box helicase NUT31_05950 PF00271 Helicase conserved C-terminal domain NUT31_05950 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NUT31_05950 PF04408 Helicase associated domain (HA2) NUT31_05950 PF11898 Domain of unknown function (DUF3418) NUT31_05955 PF00571 CBS domain NUT31_05955 PF01368 DHH family NUT31_05955 PF02272 DHHA1 domain NUT31_05955 PF01743 Poly A polymerase head domain NUT31_05960 PF00196 Bacterial regulatory proteins, luxR family NUT31_05960 PF00072 Response regulator receiver domain NUT31_05970 PF02575 YbaB/EbfC DNA-binding family NUT31_05975 PF12169 DNA polymerase III subunits gamma and tau domain III NUT31_05975 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NUT31_05975 PF12170 DNA polymerase III tau subunit V interacting with alpha NUT31_05980 PF00156 Phosphoribosyl transferase domain NUT31_05985 PF04304 Protein of unknown function (DUF454) NUT31_05990 PF01207 Dihydrouridine synthase (Dus) NUT31_06000 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_06005 PF01612 3'-5' exonuclease NUT31_06005 PF00570 HRDC domain NUT31_06010 PF00501 AMP-binding enzyme NUT31_06010 PF13193 AMP-binding enzyme C-terminal domain NUT31_06015 PF08241 Methyltransferase domain NUT31_06015 PF12697 Alpha/beta hydrolase family NUT31_06025 PF00814 Glycoprotease family NUT31_06030 PF13307 Helicase C-terminal domain NUT31_06030 PF04851 Type III restriction enzyme, res subunit NUT31_06040 PF08029 HisG, C-terminal domain NUT31_06040 PF01634 ATP phosphoribosyltransferase NUT31_06045 PF00815 Histidinol dehydrogenase NUT31_06050 PF00155 Aminotransferase class I and II NUT31_06055 PF08645 Polynucleotide kinase 3 phosphatase NUT31_06055 PF00475 Imidazoleglycerol-phosphate dehydratase NUT31_06060 PF00117 Glutamine amidotransferase class-I NUT31_06065 PF00977 Histidine biosynthesis protein NUT31_06070 PF00072 Response regulator receiver domain NUT31_06075 PF08448 PAS fold NUT31_06075 PF00990 Diguanylate cyclase, GGDEF domain NUT31_06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_06080 PF00072 Response regulator receiver domain NUT31_06080 PF01627 Hpt domain NUT31_06080 PF00512 His Kinase A (phospho-acceptor) domain NUT31_06085 PF00977 Histidine biosynthesis protein NUT31_06090 PF01502 Phosphoribosyl-AMP cyclohydrolase NUT31_06090 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NUT31_06100 PF13280 WYL domain NUT31_06100 PF08279 HTH domain NUT31_06105 PF00501 AMP-binding enzyme NUT31_06105 PF13193 AMP-binding enzyme C-terminal domain NUT31_06110 PF03606 C4-dicarboxylate anaerobic carrier NUT31_06120 PF05433 Glycine zipper 2TM domain NUT31_06130 PF01799 [2Fe-2S] binding domain NUT31_06130 PF00111 2Fe-2S iron-sulfur cluster binding domain NUT31_06135 PF00941 FAD binding domain in molybdopterin dehydrogenase NUT31_06135 PF03450 CO dehydrogenase flavoprotein C-terminal domain NUT31_06140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NUT31_06140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NUT31_06145 PF00860 Permease family NUT31_06150 PF01979 Amidohydrolase family NUT31_06155 PF00860 Permease family NUT31_06160 PF01799 [2Fe-2S] binding domain NUT31_06160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NUT31_06160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NUT31_06165 PF00941 FAD binding domain in molybdopterin dehydrogenase NUT31_06170 PF01979 Amidohydrolase family NUT31_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_06175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NUT31_06180 PF12804 MobA-like NTP transferase domain NUT31_06190 PF13478 XdhC Rossmann domain NUT31_06190 PF02625 XdhC and CoxI family NUT31_06195 PF00892 EamA-like transporter family NUT31_06200 PF00696 Amino acid kinase family NUT31_06205 PF01979 Amidohydrolase family NUT31_06210 PF07687 Peptidase dimerisation domain NUT31_06210 PF01546 Peptidase family M20/M25/M40 NUT31_06215 PF00291 Pyridoxal-phosphate dependent enzyme NUT31_06220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NUT31_06220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NUT31_06225 PF13188 PAS domain NUT31_06225 PF00158 Sigma-54 interaction domain NUT31_06225 PF02954 Bacterial regulatory protein, Fis family NUT31_06235 PF07152 YaeQ protein NUT31_06245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NUT31_06245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NUT31_06245 PF00378 Enoyl-CoA hydratase/isomerase NUT31_06250 PF02803 Thiolase, C-terminal domain NUT31_06250 PF00108 Thiolase, N-terminal domain NUT31_06255 PF07726 ATPase family associated with various cellular activities (AAA) NUT31_06255 PF17863 AAA lid domain NUT31_06260 PF01882 Protein of unknown function DUF58 NUT31_06285 PF04542 Sigma-70 region 2 NUT31_06285 PF08281 Sigma-70, region 4 NUT31_06295 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NUT31_06305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NUT31_06310 PF00563 EAL domain NUT31_06310 PF08668 HDOD domain NUT31_06315 PF02803 Thiolase, C-terminal domain NUT31_06315 PF00108 Thiolase, N-terminal domain NUT31_06320 PF00376 MerR family regulatory protein NUT31_06320 PF09278 MerR, DNA binding NUT31_06325 PF00375 Sodium:dicarboxylate symporter family NUT31_06330 PF06865 Pyrimidine/purine nucleoside phosphorylase NUT31_06335 PF03313 Serine dehydratase alpha chain NUT31_06335 PF03315 Serine dehydratase beta chain NUT31_06340 PF03313 Serine dehydratase alpha chain NUT31_06340 PF03315 Serine dehydratase beta chain NUT31_06345 PF13406 Transglycosylase SLT domain NUT31_06350 PF05166 YcgL domain NUT31_06355 PF03775 Septum formation inhibitor MinC, C-terminal domain NUT31_06355 PF05209 Septum formation inhibitor MinC, N-terminal domain NUT31_06360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NUT31_06365 PF03776 Septum formation topological specificity factor MinE NUT31_06370 PF04269 Protein of unknown function, DUF440 NUT31_06375 PF00912 Transglycosylase NUT31_06385 PF04269 Protein of unknown function, DUF440 NUT31_06395 PF17783 CvfB-like winged helix domain NUT31_06395 PF13509 S1 domain NUT31_06420 PF02525 Flavodoxin-like fold NUT31_06425 PF00892 EamA-like transporter family NUT31_06430 PF01370 NAD dependent epimerase/dehydratase family NUT31_06430 PF02222 ATP-grasp domain NUT31_06435 PF13419 Haloacid dehalogenase-like hydrolase NUT31_06445 PF00677 Lumazine binding domain NUT31_06450 PF06786 Uncharacterised protein family (UPF0253) NUT31_06455 PF01554 MatE NUT31_06485 PF00136 DNA polymerase family B NUT31_06485 PF03104 DNA polymerase family B, exonuclease domain NUT31_06495 PF00990 Diguanylate cyclase, GGDEF domain NUT31_06495 PF17151 Periplasmic sensor domain NUT31_06510 PF03279 Bacterial lipid A biosynthesis acyltransferase NUT31_06515 PF03279 Bacterial lipid A biosynthesis acyltransferase NUT31_06525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_06525 PF03466 LysR substrate binding domain NUT31_06530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NUT31_06530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NUT31_06535 PF01261 Xylose isomerase-like TIM barrel NUT31_06540 PF00933 Glycosyl hydrolase family 3 N terminal domain NUT31_06550 PF03466 LysR substrate binding domain NUT31_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_06560 PF01966 HD domain NUT31_06570 PF13188 PAS domain NUT31_06570 PF03707 Bacterial signalling protein N terminal repeat NUT31_06570 PF00990 Diguanylate cyclase, GGDEF domain NUT31_06570 PF00563 EAL domain NUT31_06575 PF00232 Glycosyl hydrolase family 1 NUT31_06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_06580 PF03466 LysR substrate binding domain NUT31_06615 PF01925 Sulfite exporter TauE/SafE NUT31_06620 PF13520 Amino acid permease NUT31_06630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NUT31_06630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NUT31_06635 PF00378 Enoyl-CoA hydratase/isomerase NUT31_06640 PF00378 Enoyl-CoA hydratase/isomerase NUT31_06645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUT31_06645 PF02770 Acyl-CoA dehydrogenase, middle domain NUT31_06645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUT31_06650 PF00171 Aldehyde dehydrogenase family NUT31_06655 PF02770 Acyl-CoA dehydrogenase, middle domain NUT31_06655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUT31_06655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUT31_06660 PF01039 Carboxyl transferase domain NUT31_06665 PF00378 Enoyl-CoA hydratase/isomerase NUT31_06670 PF02785 Biotin carboxylase C-terminal domain NUT31_06670 PF00289 Biotin carboxylase, N-terminal domain NUT31_06670 PF00364 Biotin-requiring enzyme NUT31_06670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NUT31_06675 PF00682 HMGL-like NUT31_06680 PF09278 MerR, DNA binding NUT31_06680 PF00376 MerR family regulatory protein NUT31_06695 PF01184 GPR1/FUN34/yaaH family NUT31_06700 PF06167 Glucose-regulated metallo-peptidase M90 NUT31_06710 PF01235 Sodium:alanine symporter family NUT31_06720 PF01757 Acyltransferase family NUT31_06730 PF00378 Enoyl-CoA hydratase/isomerase NUT31_06730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NUT31_06730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NUT31_06745 PF04341 Protein of unknown function, DUF485 NUT31_06750 PF00474 Sodium:solute symporter family NUT31_06755 PF00005 ABC transporter NUT31_06755 PF12848 ABC transporter NUT31_06760 PF13145 PPIC-type PPIASE domain NUT31_06765 PF00216 Bacterial DNA-binding protein NUT31_06770 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_06770 PF05362 Lon protease (S16) C-terminal proteolytic domain NUT31_06770 PF02190 ATP-dependent protease La (LON) substrate-binding domain NUT31_06775 PF10431 C-terminal, D2-small domain, of ClpB protein NUT31_06775 PF06689 ClpX C4-type zinc finger NUT31_06775 PF07724 AAA domain (Cdc48 subfamily) NUT31_06780 PF00574 Clp protease NUT31_06785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUT31_06785 PF05698 Bacterial trigger factor protein (TF) C-terminus NUT31_06785 PF05697 Bacterial trigger factor protein (TF) NUT31_06800 PF02687 FtsX-like permease family NUT31_06800 PF12704 MacB-like periplasmic core domain NUT31_06805 PF00005 ABC transporter NUT31_06810 PF02687 FtsX-like permease family NUT31_06810 PF12704 MacB-like periplasmic core domain NUT31_06820 PF00271 Helicase conserved C-terminal domain NUT31_06820 PF00270 DEAD/DEAH box helicase NUT31_06820 PF17757 UvrB interaction domain NUT31_06820 PF03461 TRCF domain NUT31_06820 PF02559 CarD-like/TRCF domain NUT31_06825 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NUT31_06830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_06835 PF00892 EamA-like transporter family NUT31_06845 PF00300 Histidine phosphatase superfamily (branch 1) NUT31_06850 PF00675 Insulinase (Peptidase family M16) NUT31_06850 PF05193 Peptidase M16 inactive domain NUT31_06855 PF05724 Thiopurine S-methyltransferase (TPMT) NUT31_06870 PF02805 Metal binding domain of Ada NUT31_06870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NUT31_06870 PF12833 Helix-turn-helix domain NUT31_06870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NUT31_06895 PF00117 Glutamine amidotransferase class-I NUT31_06895 PF00958 GMP synthase C terminal domain NUT31_06895 PF02540 NAD synthase NUT31_06900 PF00571 CBS domain NUT31_06900 PF00478 IMP dehydrogenase / GMP reductase domain NUT31_06905 PF02705 K+ potassium transporter NUT31_06915 PF01618 MotA/TolQ/ExbB proton channel family NUT31_06920 PF02472 Biopolymer transport protein ExbD/TolR NUT31_06925 PF00892 EamA-like transporter family NUT31_06930 PF13742 OB-fold nucleic acid binding domain NUT31_06930 PF02601 Exonuclease VII, large subunit NUT31_06935 PF04055 Radical SAM superfamily NUT31_06940 PF00672 HAMP domain NUT31_06940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_06945 PF00793 DAHP synthetase I family NUT31_06950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NUT31_06955 PF00266 Aminotransferase class-V NUT31_06960 PF01012 Electron transfer flavoprotein domain NUT31_06960 PF00766 Electron transfer flavoprotein FAD-binding domain NUT31_06965 PF01012 Electron transfer flavoprotein domain NUT31_06975 PF01544 CorA-like Mg2+ transporter protein NUT31_06980 PF11143 Protein of unknown function (DUF2919) NUT31_06995 PF00593 TonB dependent receptor NUT31_06995 PF07715 TonB-dependent Receptor Plug Domain NUT31_07000 PF01032 FecCD transport family NUT31_07005 PF01032 FecCD transport family NUT31_07010 PF00005 ABC transporter NUT31_07015 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NUT31_07015 PF01648 4'-phosphopantetheinyl transferase superfamily NUT31_07020 PF01497 Periplasmic binding protein NUT31_07025 PF13193 AMP-binding enzyme C-terminal domain NUT31_07025 PF00550 Phosphopantetheine attachment site NUT31_07025 PF00975 Thioesterase domain NUT31_07025 PF00668 Condensation domain NUT31_07025 PF00501 AMP-binding enzyme NUT31_07030 PF00550 Phosphopantetheine attachment site NUT31_07030 PF07993 Male sterility protein NUT31_07030 PF00668 Condensation domain NUT31_07030 PF13193 AMP-binding enzyme C-terminal domain NUT31_07030 PF00501 AMP-binding enzyme NUT31_07040 PF00501 AMP-binding enzyme NUT31_07040 PF00668 Condensation domain NUT31_07040 PF00550 Phosphopantetheine attachment site NUT31_07040 PF13193 AMP-binding enzyme C-terminal domain NUT31_07040 PF00975 Thioesterase domain NUT31_07045 PF00857 Isochorismatase family NUT31_07045 PF00550 Phosphopantetheine attachment site NUT31_07050 PF13193 AMP-binding enzyme C-terminal domain NUT31_07050 PF00501 AMP-binding enzyme NUT31_07055 PF00425 chorismate binding enzyme NUT31_07060 PF07273 Protein of unknown function (DUF1439) NUT31_07070 PF00483 Nucleotidyl transferase NUT31_07075 PF00990 Diguanylate cyclase, GGDEF domain NUT31_07075 PF00563 EAL domain NUT31_07075 PF03707 Bacterial signalling protein N terminal repeat NUT31_07090 PF00294 pfkB family carbohydrate kinase NUT31_07095 PF01124 MAPEG family NUT31_07100 PF00762 Ferrochelatase NUT31_07105 PF05191 Adenylate kinase, active site lid NUT31_07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_07110 PF00183 Hsp90 protein NUT31_07115 PF02132 RecR protein NUT31_07115 PF13662 Toprim domain NUT31_07120 PF02634 FdhD/NarQ family NUT31_07125 PF01590 GAF domain NUT31_07125 PF02954 Bacterial regulatory protein, Fis family NUT31_07125 PF00158 Sigma-54 interaction domain NUT31_07140 PF13247 4Fe-4S dicluster domain NUT31_07140 PF12800 4Fe-4S binding domain NUT31_07150 PF02705 K+ potassium transporter NUT31_07160 PF07690 Major Facilitator Superfamily NUT31_07165 PF13419 Haloacid dehalogenase-like hydrolase NUT31_07170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NUT31_07170 PF08240 Alcohol dehydrogenase GroES-like domain NUT31_07175 PF00202 Aminotransferase class-III NUT31_07180 PF00037 4Fe-4S binding domain NUT31_07180 PF12798 4Fe-4S binding domain NUT31_07185 PF00361 Proton-conducting membrane transporter NUT31_07190 PF00146 NADH dehydrogenase NUT31_07195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NUT31_07195 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NUT31_07195 PF00374 Nickel-dependent hydrogenase NUT31_07200 PF12838 4Fe-4S dicluster domain NUT31_07205 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NUT31_07210 PF07450 Formate hydrogenlyase maturation protein HycH NUT31_07215 PF01750 Hydrogenase maturation protease NUT31_07225 PF12390 Selenocysteine synthase N terminal NUT31_07225 PF03841 L-seryl-tRNA selenium transferase NUT31_07230 PF00009 Elongation factor Tu GTP binding domain NUT31_07230 PF03144 Elongation factor Tu domain 2 NUT31_07230 PF09105 Elongation factor SelB, winged helix NUT31_07230 PF09106 Elongation factor SelB, winged helix NUT31_07230 PF09107 Elongation factor SelB, winged helix NUT31_07235 PF17788 HypF Kae1-like domain NUT31_07235 PF07503 HypF finger NUT31_07235 PF00708 Acylphosphatase NUT31_07235 PF01300 Telomere recombination NUT31_07240 PF01455 HupF/HypC family NUT31_07245 PF01924 Hydrogenase formation hypA family NUT31_07250 PF02769 AIR synthase related protein, C-terminal domain NUT31_07250 PF00586 AIR synthase related protein, N-terminal domain NUT31_07255 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NUT31_07265 PF02492 CobW/HypB/UreG, nucleotide-binding domain NUT31_07270 PF00005 ABC transporter NUT31_07275 PF00005 ABC transporter NUT31_07280 PF12911 N-terminal TM domain of oligopeptide transport permease C NUT31_07280 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_07285 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_07290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_07295 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE NUT31_07300 PF01750 Hydrogenase maturation protease NUT31_07305 PF00374 Nickel-dependent hydrogenase NUT31_07310 PF03916 Polysulphide reductase, NrfD NUT31_07315 PF13247 4Fe-4S dicluster domain NUT31_07320 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal NUT31_07320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NUT31_07325 PF00158 Sigma-54 interaction domain NUT31_07325 PF00072 Response regulator receiver domain NUT31_07325 PF02954 Bacterial regulatory protein, Fis family NUT31_07335 PF02895 Signal transducing histidine kinase, homodimeric domain NUT31_07335 PF01627 Hpt domain NUT31_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_07335 PF09078 CheY binding NUT31_07335 PF01584 CheW-like domain NUT31_07340 PF00672 HAMP domain NUT31_07340 PF17202 Single cache domain 3 NUT31_07340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_07345 PF01584 CheW-like domain NUT31_07350 PF01739 CheR methyltransferase, SAM binding domain NUT31_07350 PF03705 CheR methyltransferase, all-alpha domain NUT31_07355 PF01339 CheB methylesterase NUT31_07355 PF00072 Response regulator receiver domain NUT31_07360 PF00990 Diguanylate cyclase, GGDEF domain NUT31_07360 PF03707 Bacterial signalling protein N terminal repeat NUT31_07360 PF00563 EAL domain NUT31_07365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_07365 PF00672 HAMP domain NUT31_07365 PF12729 Four helix bundle sensory module for signal transduction NUT31_07385 PF00916 Sulfate permease family NUT31_07385 PF01740 STAS domain NUT31_07415 PF03239 Iron permease FTR1 family NUT31_07420 PF01593 Flavin containing amine oxidoreductase NUT31_07435 PF07690 Major Facilitator Superfamily NUT31_07445 PF00005 ABC transporter NUT31_07450 PF12704 MacB-like periplasmic core domain NUT31_07450 PF02687 FtsX-like permease family NUT31_07475 PF13286 Phosphohydrolase-associated domain NUT31_07475 PF01966 HD domain NUT31_07485 PF01565 FAD binding domain NUT31_07485 PF02913 FAD linked oxidases, C-terminal domain NUT31_07490 PF02589 LUD domain NUT31_07495 PF11870 Domain of unknown function (DUF3390) NUT31_07495 PF13183 4Fe-4S dicluster domain NUT31_07495 PF02589 LUD domain NUT31_07500 PF02754 Cysteine-rich domain NUT31_07505 PF02652 L-lactate permease NUT31_07510 PF03466 LysR substrate binding domain NUT31_07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_07520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUT31_07525 PF00561 alpha/beta hydrolase fold NUT31_07555 PF01625 Peptide methionine sulfoxide reductase NUT31_07560 PF00696 Amino acid kinase family NUT31_07560 PF00583 Acetyltransferase (GNAT) family NUT31_07565 PF01842 ACT domain NUT31_07565 PF00696 Amino acid kinase family NUT31_07575 PF00884 Sulfatase NUT31_07580 PF17676 LD-carboxypeptidase C-terminal domain NUT31_07580 PF02016 LD-carboxypeptidase N-terminal domain NUT31_07585 PF01734 Patatin-like phospholipase NUT31_07595 PF01906 Putative heavy-metal-binding NUT31_07615 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_07620 PF05728 Uncharacterised protein family (UPF0227) NUT31_07625 PF00860 Permease family NUT31_07630 PF01432 Peptidase family M3 NUT31_07630 PF08439 Oligopeptidase F NUT31_07635 PF01432 Peptidase family M3 NUT31_07635 PF08439 Oligopeptidase F NUT31_07640 PF05661 Protein of unknown function (DUF808) NUT31_07650 PF07549 SecD/SecF GG Motif NUT31_07650 PF02355 Protein export membrane protein NUT31_07655 PF07549 SecD/SecF GG Motif NUT31_07655 PF13721 SecD export protein N-terminal TM region NUT31_07655 PF02355 Protein export membrane protein NUT31_07690 PF01230 HIT domain NUT31_07695 PF00672 HAMP domain NUT31_07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_07705 PF01979 Amidohydrolase family NUT31_07720 PF00375 Sodium:dicarboxylate symporter family NUT31_07730 PF01168 Alanine racemase, N-terminal domain NUT31_07730 PF00842 Alanine racemase, C-terminal domain NUT31_07735 PF03741 Integral membrane protein TerC family NUT31_07740 PF00005 ABC transporter NUT31_07740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NUT31_07745 PF00005 ABC transporter NUT31_07745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NUT31_07750 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_07750 PF12911 N-terminal TM domain of oligopeptide transport permease C NUT31_07755 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_07760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_07765 PF01914 MarC family integral membrane protein NUT31_07775 PF00171 Aldehyde dehydrogenase family NUT31_07775 PF00465 Iron-containing alcohol dehydrogenase NUT31_07780 PF01966 HD domain NUT31_07785 PF06580 Histidine kinase NUT31_07785 PF07694 5TMR of 5TMR-LYT NUT31_07790 PF04397 LytTr DNA-binding domain NUT31_07790 PF00072 Response regulator receiver domain NUT31_07795 PF02554 Carbon starvation protein CstA NUT31_07800 PF11742 Protein of unknown function (DUF3302) NUT31_07805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_07805 PF00529 HlyD membrane-fusion protein of T1SS NUT31_07810 PF00271 Helicase conserved C-terminal domain NUT31_07810 PF04851 Type III restriction enzyme, res subunit NUT31_07815 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NUT31_07820 PF00462 Glutaredoxin NUT31_07830 PF00155 Aminotransferase class I and II NUT31_07835 PF03606 C4-dicarboxylate anaerobic carrier NUT31_07840 PF12241 Trans-2-enoyl-CoA reductase catalytic region NUT31_07840 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NUT31_07840 PF07055 Enoyl reductase FAD binding domain NUT31_07850 PF13426 PAS domain NUT31_07850 PF08447 PAS fold NUT31_07850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_07860 PF00892 EamA-like transporter family NUT31_07865 PF02508 Rnf-Nqr subunit, membrane protein NUT31_07870 PF04060 Putative Fe-S cluster NUT31_07875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NUT31_07875 PF13375 RnfC Barrel sandwich hybrid domain NUT31_07875 PF10531 SLBB domain NUT31_07875 PF12838 4Fe-4S dicluster domain NUT31_07880 PF03116 NQR2, RnfD, RnfE family NUT31_07885 PF04205 FMN-binding domain NUT31_07890 PF02508 Rnf-Nqr subunit, membrane protein NUT31_07895 PF10576 Iron-sulfur binding domain of endonuclease III NUT31_07895 PF00633 Helix-hairpin-helix motif NUT31_07895 PF00730 HhH-GPD superfamily base excision DNA repair protein NUT31_07900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUT31_07905 PF18393 MotY N-terminal domain NUT31_07905 PF00691 OmpA family NUT31_07910 PF12729 Four helix bundle sensory module for signal transduction NUT31_07910 PF00672 HAMP domain NUT31_07910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_07915 PF00929 Exonuclease NUT31_07920 PF03553 Na+/H+ antiporter family NUT31_07920 PF13726 Na+-H+ antiporter family NUT31_07925 PF00271 Helicase conserved C-terminal domain NUT31_07925 PF03880 DbpA RNA binding domain NUT31_07925 PF00270 DEAD/DEAH box helicase NUT31_07930 PF03061 Thioesterase superfamily NUT31_07940 PF01565 FAD binding domain NUT31_07940 PF02913 FAD linked oxidases, C-terminal domain NUT31_07940 PF13183 4Fe-4S dicluster domain NUT31_07950 PF03471 Transporter associated domain NUT31_07950 PF03741 Integral membrane protein TerC family NUT31_07955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NUT31_07960 PF00962 Adenosine/AMP deaminase NUT31_07965 PF13344 Haloacid dehalogenase-like hydrolase NUT31_07970 PF00999 Sodium/hydrogen exchanger family NUT31_07970 PF02254 TrkA-N domain NUT31_07980 PF00733 Asparagine synthase NUT31_07980 PF13537 Glutamine amidotransferase domain NUT31_07990 PF14497 Glutathione S-transferase, C-terminal domain NUT31_07990 PF02798 Glutathione S-transferase, N-terminal domain NUT31_08000 PF04209 homogentisate 1,2-dioxygenase NUT31_08005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUT31_08015 PF00849 RNA pseudouridylate synthase NUT31_08020 PF00563 EAL domain NUT31_08020 PF00990 Diguanylate cyclase, GGDEF domain NUT31_08020 PF13426 PAS domain NUT31_08025 PF08447 PAS fold NUT31_08025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_08035 PF09924 Uncharacterised conserved protein (DUF2156) NUT31_08035 PF03706 Lysylphosphatidylglycerol synthase TM region NUT31_08040 PF08019 Phosphoethanolamine transferase EptA/EptB NUT31_08040 PF00884 Sulfatase NUT31_08060 PF01027 Inhibitor of apoptosis-promoting Bax1 NUT31_08065 PF12805 FUSC-like inner membrane protein yccS NUT31_08070 PF04358 DsrC like protein NUT31_08075 PF05036 Sporulation related domain NUT31_08080 PF02875 Mur ligase family, glutamate ligase domain NUT31_08080 PF08245 Mur ligase middle domain NUT31_08085 PF01039 Carboxyl transferase domain NUT31_08085 PF17848 Acetyl-coA carboxylase zinc finger domain NUT31_08090 PF01416 tRNA pseudouridine synthase NUT31_08100 PF02774 Semialdehyde dehydrogenase, dimerisation domain NUT31_08100 PF01118 Semialdehyde dehydrogenase, NAD binding domain NUT31_08105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUT31_08105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUT31_08105 PF11890 Domain of unknown function (DUF3410) NUT31_08110 PF01569 PAP2 superfamily NUT31_08115 PF03180 NLPA lipoprotein NUT31_08135 PF00082 Subtilase family NUT31_08135 PF01483 Proprotein convertase P-domain NUT31_08145 PF00933 Glycosyl hydrolase family 3 N terminal domain NUT31_08145 PF01915 Glycosyl hydrolase family 3 C-terminal domain NUT31_08145 PF14310 Fibronectin type III-like domain NUT31_08155 PF00391 PEP-utilising enzyme, mobile domain NUT31_08155 PF02896 PEP-utilising enzyme, TIM barrel domain NUT31_08155 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NUT31_08160 PF03618 Kinase/pyrophosphorylase NUT31_08170 PF00324 Amino acid permease NUT31_08215 PF00664 ABC transporter transmembrane region NUT31_08215 PF00005 ABC transporter NUT31_08215 PF03412 Peptidase C39 family NUT31_08220 PF04055 Radical SAM superfamily NUT31_08220 PF16199 Radical_SAM C-terminal domain NUT31_08225 PF01493 GXGXG motif NUT31_08225 PF04898 Glutamate synthase central domain NUT31_08225 PF00310 Glutamine amidotransferases class-II NUT31_08225 PF01645 Conserved region in glutamate synthase NUT31_08230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NUT31_08230 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_08235 PF00005 ABC transporter NUT31_08240 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_08245 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_08260 PF00376 MerR family regulatory protein NUT31_08260 PF09278 MerR, DNA binding NUT31_08275 PF14521 Lysine-specific metallo-endopeptidase NUT31_08285 PF00270 DEAD/DEAH box helicase NUT31_08285 PF00271 Helicase conserved C-terminal domain NUT31_08290 PF13302 Acetyltransferase (GNAT) domain NUT31_08315 PF07759 Protein of unknown function (DUF1615) NUT31_08320 PF00682 HMGL-like NUT31_08320 PF08502 LeuA allosteric (dimerisation) domain NUT31_08325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NUT31_08325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NUT31_08325 PF02142 MGS-like domain NUT31_08330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NUT31_08330 PF00117 Glutamine amidotransferase class-I NUT31_08335 PF05173 Dihydrodipicolinate reductase, C-terminus NUT31_08335 PF01113 Dihydrodipicolinate reductase, N-terminus NUT31_08345 PF01812 5-formyltetrahydrofolate cyclo-ligase family NUT31_08350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NUT31_08355 PF01842 ACT domain NUT31_08355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUT31_08355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUT31_08360 PF01219 Prokaryotic diacylglycerol kinase NUT31_08365 PF00793 DAHP synthetase I family NUT31_08370 PF00583 Acetyltransferase (GNAT) family NUT31_08375 PF00005 ABC transporter NUT31_08380 PF01032 FecCD transport family NUT31_08385 PF01627 Hpt domain NUT31_08385 PF00989 PAS fold NUT31_08385 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_08385 PF00072 Response regulator receiver domain NUT31_08385 PF00512 His Kinase A (phospho-acceptor) domain NUT31_08385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_08395 PF00437 Type II/IV secretion system protein NUT31_08400 PF00483 Nucleotidyl transferase NUT31_08415 PF07664 Ferrous iron transport protein B C terminus NUT31_08415 PF02421 Ferrous iron transport protein B NUT31_08415 PF07670 Nucleoside recognition NUT31_08425 PF01253 Translation initiation factor SUI1 NUT31_08430 PF01169 Uncharacterized protein family UPF0016 NUT31_08460 PF13185 GAF domain NUT31_08460 PF00990 Diguanylate cyclase, GGDEF domain NUT31_08470 PF09190 DALR domain NUT31_08470 PF01406 tRNA synthetases class I (C) catalytic domain NUT31_08475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NUT31_08485 PF00149 Calcineurin-like phosphoesterase NUT31_08490 PF03916 Polysulphide reductase, NrfD NUT31_08495 PF13247 4Fe-4S dicluster domain NUT31_08495 PF00037 4Fe-4S binding domain NUT31_08515 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NUT31_08520 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB NUT31_08525 PF00672 HAMP domain NUT31_08525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_08530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_08530 PF13426 PAS domain NUT31_08530 PF08447 PAS fold NUT31_08565 PF01066 CDP-alcohol phosphatidyltransferase NUT31_08570 PF08459 UvrC Helix-hairpin-helix N-terminal NUT31_08570 PF01541 GIY-YIG catalytic domain NUT31_08570 PF02151 UvrB/uvrC motif NUT31_08575 PF00072 Response regulator receiver domain NUT31_08575 PF00196 Bacterial regulatory proteins, luxR family NUT31_08580 PF02348 Cytidylyltransferase NUT31_08585 PF03966 Trm112p-like protein NUT31_08590 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NUT31_08595 PF00005 ABC transporter NUT31_08595 PF00664 ABC transporter transmembrane region NUT31_08600 PF00753 Metallo-beta-lactamase superfamily NUT31_08600 PF03772 Competence protein NUT31_08615 PF05872 Bacterial protein of unknown function (DUF853) NUT31_08620 PF00155 Aminotransferase class I and II NUT31_08630 PF13609 Gram-negative porin NUT31_08635 PF06733 DEAD_2 NUT31_08635 PF13307 Helicase C-terminal domain NUT31_08645 PF00850 Histone deacetylase domain NUT31_08650 PF07690 Major Facilitator Superfamily NUT31_08655 PF01926 50S ribosome-binding GTPase NUT31_08660 PF00245 Alkaline phosphatase NUT31_08665 PF00245 Alkaline phosphatase NUT31_08680 PF14760 Rnk N-terminus NUT31_08680 PF01272 Transcription elongation factor, GreA/GreB, C-term NUT31_08685 PF00196 Bacterial regulatory proteins, luxR family NUT31_08685 PF00072 Response regulator receiver domain NUT31_08690 PF05231 MASE1 NUT31_08690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_08690 PF07730 Histidine kinase NUT31_08695 PF07690 Major Facilitator Superfamily NUT31_08700 PF00990 Diguanylate cyclase, GGDEF domain NUT31_08705 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_08710 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_08715 PF00005 ABC transporter NUT31_08730 PF04116 Fatty acid hydroxylase superfamily NUT31_08735 PF13520 Amino acid permease NUT31_08750 PF01595 Cyclin M transmembrane N-terminal domain NUT31_08750 PF00571 CBS domain NUT31_08750 PF03471 Transporter associated domain NUT31_08755 PF01895 PhoU domain NUT31_08760 PF00005 ABC transporter NUT31_08765 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_08770 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_08775 PF14437 MafB19-like deaminase NUT31_08790 PF01274 Malate synthase NUT31_08795 PF00463 Isocitrate lyase family NUT31_08800 PF00308 Bacterial dnaA protein NUT31_08815 PF02769 AIR synthase related protein, C-terminal domain NUT31_08815 PF00586 AIR synthase related protein, N-terminal domain NUT31_08820 PF00551 Formyl transferase NUT31_08825 PF01784 NIF3 (NGG1p interacting factor 3) NUT31_08830 PF00158 Sigma-54 interaction domain NUT31_08830 PF02954 Bacterial regulatory protein, Fis family NUT31_08830 PF00072 Response regulator receiver domain NUT31_08835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_08835 PF00512 His Kinase A (phospho-acceptor) domain NUT31_08835 PF13188 PAS domain NUT31_08840 PF06490 Flagellar regulatory protein FleQ NUT31_08840 PF02954 Bacterial regulatory protein, Fis family NUT31_08840 PF00158 Sigma-54 interaction domain NUT31_08850 PF01842 ACT domain NUT31_08855 PF02503 Polyphosphate kinase middle domain NUT31_08855 PF13090 Polyphosphate kinase C-terminal domain 2 NUT31_08855 PF17941 Polyphosphate kinase C-terminal domain 1 NUT31_08855 PF13089 Polyphosphate kinase N-terminal domain NUT31_08860 PF02541 Ppx/GppA phosphatase family NUT31_08865 PF01769 Divalent cation transporter NUT31_08865 PF03448 MgtE intracellular N domain NUT31_08865 PF00571 CBS domain NUT31_08870 PF00669 Bacterial flagellin N-terminal helical region NUT31_08875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUT31_08875 PF00460 Flagella basal body rod protein NUT31_08880 PF10135 Rod binding protein NUT31_08880 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NUT31_08885 PF02119 Flagellar P-ring protein NUT31_08890 PF02107 Flagellar L-ring protein NUT31_08895 PF00460 Flagella basal body rod protein NUT31_08895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUT31_08900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUT31_08900 PF00460 Flagella basal body rod protein NUT31_08905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUT31_08905 PF07559 Flagellar basal body protein FlaE NUT31_08905 PF00460 Flagella basal body rod protein NUT31_08915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUT31_08915 PF00460 Flagella basal body rod protein NUT31_08920 PF00460 Flagella basal body rod protein NUT31_08925 PF03705 CheR methyltransferase, all-alpha domain NUT31_08925 PF01739 CheR methyltransferase, SAM binding domain NUT31_08930 PF01584 CheW-like domain NUT31_08930 PF00072 Response regulator receiver domain NUT31_08935 PF13144 Chaperone for flagella basal body P-ring formation NUT31_08950 PF12850 Calcineurin-like phosphoesterase superfamily domain NUT31_08955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_08965 PF01479 S4 domain NUT31_08965 PF00849 RNA pseudouridylate synthase NUT31_08970 PF11871 Domain of unknown function (DUF3391) NUT31_08970 PF01966 HD domain NUT31_08980 PF00923 Transaldolase/Fructose-6-phosphate aldolase NUT31_08985 PF04055 Radical SAM superfamily NUT31_08990 PF01228 Glycine radical NUT31_08990 PF02901 Pyruvate formate lyase-like NUT31_08995 PF00455 DeoR C terminal sensor domain NUT31_08995 PF08220 DeoR-like helix-turn-helix domain NUT31_09000 PF00892 EamA-like transporter family NUT31_09005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_09030 PF00313 'Cold-shock' DNA-binding domain NUT31_09035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NUT31_09035 PF00364 Biotin-requiring enzyme NUT31_09035 PF02817 e3 binding domain NUT31_09040 PF02779 Transketolase, pyrimidine binding domain NUT31_09040 PF02780 Transketolase, C-terminal domain NUT31_09045 PF00676 Dehydrogenase E1 component NUT31_09050 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NUT31_09060 PF05472 DNA replication terminus site-binding protein (Ter protein) NUT31_09065 PF00271 Helicase conserved C-terminal domain NUT31_09065 PF00176 SNF2 family N-terminal domain NUT31_09065 PF04434 SWIM zinc finger NUT31_09070 PF04337 Protein of unknown function, DUF480 NUT31_09080 PF02706 Chain length determinant protein NUT31_09085 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NUT31_09090 PF04321 RmlD substrate binding domain NUT31_09095 PF02719 Polysaccharide biosynthesis protein NUT31_09100 PF02397 Bacterial sugar transferase NUT31_09105 PF01370 NAD dependent epimerase/dehydratase family NUT31_09110 PF00535 Glycosyl transferase family 2 NUT31_09130 PF01501 Glycosyl transferase family 8 NUT31_09130 PF00535 Glycosyl transferase family 2 NUT31_09135 PF01943 Polysaccharide biosynthesis protein NUT31_09140 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NUT31_09150 PF05523 WxcM-like, C-terminal NUT31_09155 PF00483 Nucleotidyl transferase NUT31_09160 PF16363 GDP-mannose 4,6 dehydratase NUT31_09165 PF02321 Outer membrane efflux protein NUT31_09170 PF00873 AcrB/AcrD/AcrF family NUT31_09175 PF00529 HlyD membrane-fusion protein of T1SS NUT31_09175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_09180 PF00440 Bacterial regulatory proteins, tetR family NUT31_09180 PF08361 MAATS-type transcriptional repressor, C-terminal region NUT31_09200 PF01479 S4 domain NUT31_09200 PF00849 RNA pseudouridylate synthase NUT31_09205 PF04079 Segregation and condensation complex subunit ScpB NUT31_09210 PF02616 Segregation and condensation protein ScpA NUT31_09215 PF01300 Telomere recombination NUT31_09220 PF02811 PHP domain NUT31_09225 PF00425 chorismate binding enzyme NUT31_09225 PF04715 Anthranilate synthase component I, N terminal region NUT31_09230 PF00117 Glutamine amidotransferase class-I NUT31_09230 PF02885 Glycosyl transferase family, helical bundle domain NUT31_09230 PF00591 Glycosyl transferase family, a/b domain NUT31_09235 PF00591 Glycosyl transferase family, a/b domain NUT31_09235 PF02885 Glycosyl transferase family, helical bundle domain NUT31_09240 PF00218 Indole-3-glycerol phosphate synthase NUT31_09240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NUT31_09245 PF00291 Pyridoxal-phosphate dependent enzyme NUT31_09250 PF00290 Tryptophan synthase alpha chain NUT31_09275 PF04307 LexA-binding, inner membrane-associated putative hydrolase NUT31_09295 PF07670 Nucleoside recognition NUT31_09295 PF01773 Na+ dependent nucleoside transporter N-terminus NUT31_09295 PF07662 Na+ dependent nucleoside transporter C-terminus NUT31_09305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NUT31_09310 PF00005 ABC transporter NUT31_09315 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_09320 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NUT31_09330 PF07690 Major Facilitator Superfamily NUT31_09335 PF01040 UbiA prenyltransferase family NUT31_09340 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NUT31_09345 PF00510 Cytochrome c oxidase subunit III NUT31_09350 PF00115 Cytochrome C and Quinol oxidase polypeptide I NUT31_09355 PF06481 COX Aromatic Rich Motif NUT31_09355 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NUT31_09365 PF00034 Cytochrome c NUT31_09365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NUT31_09375 PF01156 Inosine-uridine preferring nucleoside hydrolase NUT31_09390 PF00127 Copper binding proteins, plastocyanin/azurin family NUT31_09395 PF02424 ApbE family NUT31_09400 PF07690 Major Facilitator Superfamily NUT31_09415 PF03372 Endonuclease/Exonuclease/phosphatase family NUT31_09420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_09425 PF00873 AcrB/AcrD/AcrF family NUT31_09435 PF00529 HlyD membrane-fusion protein of T1SS NUT31_09435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_09440 PF00873 AcrB/AcrD/AcrF family NUT31_09460 PF10437 Bacterial lipoate protein ligase C-terminus NUT31_09460 PF03099 Biotin/lipoate A/B protein ligase family NUT31_09465 PF03707 Bacterial signalling protein N terminal repeat NUT31_09465 PF00990 Diguanylate cyclase, GGDEF domain NUT31_09465 PF00563 EAL domain NUT31_09470 PF00873 AcrB/AcrD/AcrF family NUT31_09485 PF04143 Sulphur transport NUT31_09500 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_09510 PF02308 MgtC family NUT31_09515 PF13407 Periplasmic binding protein domain NUT31_09515 PF00356 Bacterial regulatory proteins, lacI family NUT31_09520 PF08244 Glycosyl hydrolases family 32 C terminal NUT31_09520 PF00251 Glycosyl hydrolases family 32 N-terminal domain NUT31_09525 PF00367 phosphotransferase system, EIIB NUT31_09525 PF02378 Phosphotransferase system, EIIC NUT31_09530 PF00294 pfkB family carbohydrate kinase NUT31_09535 PF02264 LamB porin NUT31_09535 PF11471 Maltoporin periplasmic N-terminal extension NUT31_09540 PF01556 DnaJ C terminal domain NUT31_09540 PF00226 DnaJ domain NUT31_09540 PF00684 DnaJ central domain NUT31_09545 PF00012 Hsp70 protein NUT31_09550 PF01025 GrpE NUT31_09555 PF01513 ATP-NAD kinase NUT31_09560 PF02463 RecF/RecN/SMC N terminal domain NUT31_09575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_09580 PF00005 ABC transporter NUT31_09580 PF02687 FtsX-like permease family NUT31_09580 PF12704 MacB-like periplasmic core domain NUT31_09585 PF02321 Outer membrane efflux protein NUT31_09590 PF08021 Siderophore-interacting FAD-binding domain NUT31_09590 PF04954 Siderophore-interacting protein NUT31_09595 PF00793 DAHP synthetase I family NUT31_09600 PF00816 H-NS histone family NUT31_09625 PF01266 FAD dependent oxidoreductase NUT31_09630 PF01381 Helix-turn-helix NUT31_09630 PF07883 Cupin domain NUT31_09635 PF00171 Aldehyde dehydrogenase family NUT31_09640 PF00202 Aminotransferase class-III NUT31_09650 PF00324 Amino acid permease NUT31_09660 PF13520 Amino acid permease NUT31_09670 PF02690 Na+/Pi-cotransporter NUT31_09675 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NUT31_09675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUT31_09680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NUT31_09685 PF00512 His Kinase A (phospho-acceptor) domain NUT31_09685 PF00989 PAS fold NUT31_09685 PF01627 Hpt domain NUT31_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_09685 PF00072 Response regulator receiver domain NUT31_09685 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_09700 PF01048 Phosphorylase superfamily NUT31_09715 PF00005 ABC transporter NUT31_09715 PF12848 ABC transporter NUT31_09730 PF13474 SnoaL-like domain NUT31_09735 PF14821 Threonine synthase N terminus NUT31_09735 PF00291 Pyridoxal-phosphate dependent enzyme NUT31_09740 PF08544 GHMP kinases C terminal NUT31_09740 PF00288 GHMP kinases N terminal domain NUT31_09745 PF13840 ACT domain NUT31_09745 PF03447 Homoserine dehydrogenase, NAD binding domain NUT31_09745 PF00742 Homoserine dehydrogenase NUT31_09745 PF01842 ACT domain NUT31_09745 PF00696 Amino acid kinase family NUT31_09750 PF00588 SpoU rRNA Methylase family NUT31_09755 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NUT31_09770 PF03737 Aldolase/RraA NUT31_09780 PF00072 Response regulator receiver domain NUT31_09780 PF00486 Transcriptional regulatory protein, C terminal NUT31_09795 PF00005 ABC transporter NUT31_09795 PF00664 ABC transporter transmembrane region NUT31_09800 PF00005 ABC transporter NUT31_09800 PF00664 ABC transporter transmembrane region NUT31_09820 PF18389 TrmO C-terminal domain NUT31_09820 PF01980 tRNA-methyltransferase O NUT31_09825 PF00672 HAMP domain NUT31_09825 PF01966 HD domain NUT31_09830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NUT31_09830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NUT31_09840 PF02861 Clp amino terminal domain, pathogenicity island component NUT31_09840 PF17871 AAA lid domain NUT31_09840 PF10431 C-terminal, D2-small domain, of ClpB protein NUT31_09840 PF07724 AAA domain (Cdc48 subfamily) NUT31_09840 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_09845 PF00291 Pyridoxal-phosphate dependent enzyme NUT31_09850 PF00381 PTS HPr component phosphorylation site NUT31_09855 PF02896 PEP-utilising enzyme, TIM barrel domain NUT31_09855 PF00391 PEP-utilising enzyme, mobile domain NUT31_09855 PF05524 PEP-utilising enzyme, N-terminal NUT31_09860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NUT31_09865 PF00990 Diguanylate cyclase, GGDEF domain NUT31_09875 PF01292 Prokaryotic cytochrome b561 NUT31_09885 PF13476 AAA domain NUT31_09890 PF00149 Calcineurin-like phosphoesterase NUT31_09890 PF12320 Type 5 capsule protein repressor C-terminal domain NUT31_09900 PF04381 Putative exonuclease, RdgC NUT31_09910 PF00999 Sodium/hydrogen exchanger family NUT31_09910 PF02254 TrkA-N domain NUT31_09915 PF04389 Peptidase family M28 NUT31_09915 PF04151 Bacterial pre-peptidase C-terminal domain NUT31_09925 PF02887 Pyruvate kinase, alpha/beta domain NUT31_09925 PF00224 Pyruvate kinase, barrel domain NUT31_09930 PF12794 Mechanosensitive ion channel inner membrane domain 1 NUT31_09930 PF12795 Mechanosensitive ion channel porin domain NUT31_09930 PF00924 Mechanosensitive ion channel NUT31_09940 PF10282 Lactonase, 7-bladed beta-propeller NUT31_09945 PF00860 Permease family NUT31_09950 PF01458 Uncharacterized protein family (UPF0051) NUT31_09955 PF05433 Glycine zipper 2TM domain NUT31_09955 PF16998 17 kDa outer membrane surface antigen NUT31_09960 PF03949 Malic enzyme, NAD binding domain NUT31_09960 PF00390 Malic enzyme, N-terminal domain NUT31_09965 PF00072 Response regulator receiver domain NUT31_09975 PF13247 4Fe-4S dicluster domain NUT31_09980 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NUT31_09980 PF01568 Molydopterin dinucleotide binding domain NUT31_09980 PF00384 Molybdopterin oxidoreductase NUT31_09980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NUT31_09980 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NUT31_09980 PF01568 Molydopterin dinucleotide binding domain NUT31_09980 PF00384 Molybdopterin oxidoreductase NUT31_09980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NUT31_09980 PF12838 4Fe-4S dicluster domain NUT31_09980 PF12838 4Fe-4S dicluster domain NUT31_10015 PF02634 FdhD/NarQ family NUT31_10020 PF12727 PBP superfamily domain NUT31_10020 PF12728 Helix-turn-helix domain NUT31_10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_10025 PF00512 His Kinase A (phospho-acceptor) domain NUT31_10025 PF00989 PAS fold NUT31_10030 PF00072 Response regulator receiver domain NUT31_10030 PF02954 Bacterial regulatory protein, Fis family NUT31_10030 PF00158 Sigma-54 interaction domain NUT31_10035 PF12849 PBP superfamily domain NUT31_10040 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_10045 PF00005 ABC transporter NUT31_10050 PF12804 MobA-like NTP transferase domain NUT31_10055 PF00994 Probable molybdopterin binding domain NUT31_10055 PF03454 MoeA C-terminal region (domain IV) NUT31_10055 PF03453 MoeA N-terminal region (domain I and II) NUT31_10060 PF04632 Fusaric acid resistance protein family NUT31_10075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_10075 PF08447 PAS fold NUT31_10075 PF13426 PAS domain NUT31_10100 PF05114 Protein of unknown function (DUF692) NUT31_10110 PF10725 Protein of unknown function (DUF2517) NUT31_10130 PF09308 LuxQ, periplasmic NUT31_10130 PF00072 Response regulator receiver domain NUT31_10130 PF00512 His Kinase A (phospho-acceptor) domain NUT31_10130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_10135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_10140 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_10145 PF12911 N-terminal TM domain of oligopeptide transport permease C NUT31_10145 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_10150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NUT31_10150 PF00005 ABC transporter NUT31_10155 PF00005 ABC transporter NUT31_10155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NUT31_10165 PF01869 BadF/BadG/BcrA/BcrD ATPase family NUT31_10170 PF00728 Glycosyl hydrolase family 20, catalytic domain NUT31_10170 PF02838 Glycosyl hydrolase family 20, domain 2 NUT31_10175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_10175 PF08447 PAS fold NUT31_10190 PF01131 DNA topoisomerase NUT31_10190 PF01751 Toprim domain NUT31_10190 PF01396 Topoisomerase DNA binding C4 zinc finger NUT31_10190 PF08272 Topoisomerase I zinc-ribbon-like NUT31_10195 PF04996 Succinylarginine dihydrolase NUT31_10200 PF08496 Peptidase family S49 N-terminal NUT31_10200 PF01343 Peptidase family S49 NUT31_10205 PF00106 short chain dehydrogenase NUT31_10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_10210 PF03466 LysR substrate binding domain NUT31_10215 PF07690 Major Facilitator Superfamily NUT31_10220 PF00155 Aminotransferase class I and II NUT31_10230 PF03466 LysR substrate binding domain NUT31_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_10235 PF00709 Adenylosuccinate synthetase NUT31_10240 PF01161 Phosphatidylethanolamine-binding protein NUT31_10250 PF01204 Trehalase NUT31_10255 PF00579 tRNA synthetases class I (W and Y) NUT31_10260 PF08525 Opacity-associated protein A N-terminal motif NUT31_10260 PF01551 Peptidase family M23 NUT31_10260 PF01476 LysM domain NUT31_10265 PF03702 Anhydro-N-acetylmuramic acid kinase NUT31_10270 PF01965 DJ-1/PfpI family NUT31_10275 PF01042 Endoribonuclease L-PSP NUT31_10285 PF00456 Transketolase, thiamine diphosphate binding domain NUT31_10285 PF02779 Transketolase, pyrimidine binding domain NUT31_10285 PF02780 Transketolase, C-terminal domain NUT31_10290 PF02773 S-adenosylmethionine synthetase, C-terminal domain NUT31_10290 PF02772 S-adenosylmethionine synthetase, central domain NUT31_10290 PF00438 S-adenosylmethionine synthetase, N-terminal domain NUT31_10295 PF10263 SprT-like family NUT31_10295 PF17283 SprT-like zinc ribbon domain NUT31_10300 PF04231 Endonuclease I NUT31_10305 PF04452 RNA methyltransferase NUT31_10310 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NUT31_10310 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NUT31_10315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_10315 PF00672 HAMP domain NUT31_10315 PF12729 Four helix bundle sensory module for signal transduction NUT31_10320 PF02622 Uncharacterized ACR, COG1678 NUT31_10325 PF03652 Holliday junction resolvase NUT31_10330 PF00854 POT family NUT31_10335 PF00144 Beta-lactamase NUT31_10340 PF07726 ATPase family associated with various cellular activities (AAA) NUT31_10340 PF17863 AAA lid domain NUT31_10350 PF11992 Domain of unknown function (DUF3488) NUT31_10350 PF13559 Domain of unknown function (DUF4129) NUT31_10350 PF01841 Transglutaminase-like superfamily NUT31_10355 PF01235 Sodium:alanine symporter family NUT31_10360 PF00923 Transaldolase/Fructose-6-phosphate aldolase NUT31_10375 PF03167 Uracil DNA glycosylase superfamily NUT31_10380 PF01228 Glycine radical NUT31_10385 PF00375 Sodium:dicarboxylate symporter family NUT31_10390 PF00793 DAHP synthetase I family NUT31_10395 PF13369 Transglutaminase-like superfamily NUT31_10405 PF13847 Methyltransferase domain NUT31_10405 PF17827 PrmC N-terminal domain NUT31_10410 PF00472 RF-1 domain NUT31_10410 PF03462 PCRF domain NUT31_10415 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NUT31_10415 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NUT31_10415 PF01488 Shikimate / quinate 5-dehydrogenase NUT31_10420 PF03550 Outer membrane lipoprotein LolB NUT31_10425 PF08544 GHMP kinases C terminal NUT31_10425 PF00288 GHMP kinases N terminal domain NUT31_10435 PF14572 Phosphoribosyl synthetase-associated domain NUT31_10435 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NUT31_10440 PF02872 5'-nucleotidase, C-terminal domain NUT31_10440 PF00149 Calcineurin-like phosphoesterase NUT31_10445 PF01195 Peptidyl-tRNA hydrolase NUT31_10450 PF01926 50S ribosome-binding GTPase NUT31_10450 PF06071 Protein of unknown function (DUF933) NUT31_10495 PF02080 TrkA-C domain NUT31_10495 PF03600 Citrate transporter NUT31_10500 PF04973 Nicotinamide mononucleotide transporter NUT31_10505 PF01048 Phosphorylase superfamily NUT31_10515 PF04266 ASCH domain NUT31_10525 PF00128 Alpha amylase, catalytic domain NUT31_10525 PF11941 Domain of unknown function (DUF3459) NUT31_10535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NUT31_10535 PF10371 Domain of unknown function NUT31_10535 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NUT31_10535 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NUT31_10535 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NUT31_10540 PF07690 Major Facilitator Superfamily NUT31_10545 PF13419 Haloacid dehalogenase-like hydrolase NUT31_10555 PF00171 Aldehyde dehydrogenase family NUT31_10560 PF04958 Arginine N-succinyltransferase beta subunit NUT31_10565 PF00202 Aminotransferase class-III NUT31_10570 PF00117 Glutamine amidotransferase class-I NUT31_10580 PF00579 tRNA synthetases class I (W and Y) NUT31_10585 PF13419 Haloacid dehalogenase-like hydrolase NUT31_10590 PF00834 Ribulose-phosphate 3 epimerase family NUT31_10595 PF02086 D12 class N6 adenine-specific DNA methyltransferase NUT31_10605 PF01761 3-dehydroquinate synthase NUT31_10610 PF01202 Shikimate kinase NUT31_10615 PF11741 AMIN domain NUT31_10615 PF00263 Bacterial type II and III secretion system protein NUT31_10615 PF03958 Bacterial type II/III secretion system short domain NUT31_10615 PF07660 Secretin and TonB N terminus short domain NUT31_10625 PF04350 Pilus assembly protein, PilO NUT31_10635 PF11104 Type IV pilus assembly protein PilM; NUT31_10640 PF00905 Penicillin binding protein transpeptidase domain NUT31_10640 PF00912 Transglycosylase NUT31_10640 PF17092 Penicillin-binding protein OB-like domain NUT31_10645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_10645 PF03466 LysR substrate binding domain NUT31_10650 PF02743 Cache domain NUT31_10650 PF00672 HAMP domain NUT31_10650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_10665 PF03466 LysR substrate binding domain NUT31_10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_10680 PF01551 Peptidase family M23 NUT31_10680 PF01476 LysM domain NUT31_10680 PF08525 Opacity-associated protein A N-terminal motif NUT31_10690 PF00924 Mechanosensitive ion channel NUT31_10690 PF12795 Mechanosensitive ion channel porin domain NUT31_10690 PF12794 Mechanosensitive ion channel inner membrane domain 1 NUT31_10695 PF03009 Glycerophosphoryl diester phosphodiesterase family NUT31_10700 PF02743 Cache domain NUT31_10700 PF00672 HAMP domain NUT31_10700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_10705 PF02910 Fumarate reductase flavoprotein C-term NUT31_10705 PF00890 FAD binding domain NUT31_10710 PF13183 4Fe-4S dicluster domain NUT31_10710 PF13085 2Fe-2S iron-sulfur cluster binding domain NUT31_10715 PF02300 Fumarate reductase subunit C NUT31_10720 PF02313 Fumarate reductase subunit D NUT31_10740 PF06224 Winged helix DNA-binding domain NUT31_10745 PF13649 Methyltransferase domain NUT31_10755 PF00501 AMP-binding enzyme NUT31_10775 PF00072 Response regulator receiver domain NUT31_10775 PF00486 Transcriptional regulatory protein, C terminal NUT31_10780 PF00512 His Kinase A (phospho-acceptor) domain NUT31_10780 PF08521 Two-component sensor kinase N-terminal NUT31_10780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_10790 PF00478 IMP dehydrogenase / GMP reductase domain NUT31_10800 PF01132 Elongation factor P (EF-P) OB domain NUT31_10800 PF08207 Elongation factor P (EF-P) KOW-like domain NUT31_10800 PF09285 Elongation factor P, C-terminal NUT31_10805 PF09997 Predicted membrane protein (DUF2238) NUT31_10815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUT31_10815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUT31_10825 PF00990 Diguanylate cyclase, GGDEF domain NUT31_10835 PF13419 Haloacid dehalogenase-like hydrolase NUT31_10845 PF03466 LysR substrate binding domain NUT31_10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_10850 PF05230 MASE2 domain NUT31_10850 PF00990 Diguanylate cyclase, GGDEF domain NUT31_10855 PF00313 'Cold-shock' DNA-binding domain NUT31_10860 PF00857 Isochorismatase family NUT31_10865 PF01494 FAD binding domain NUT31_10870 PF04055 Radical SAM superfamily NUT31_10870 PF01938 TRAM domain NUT31_10870 PF00919 Uncharacterized protein family UPF0004 NUT31_10875 PF02562 PhoH-like protein NUT31_10880 PF02130 Uncharacterized protein family UPF0054 NUT31_10885 PF00571 CBS domain NUT31_10885 PF03471 Transporter associated domain NUT31_10890 PF00795 Carbon-nitrogen hydrolase NUT31_10895 PF07295 Zinc-ribbon containing domain NUT31_10900 PF00133 tRNA synthetases class I (I, L, M and V) NUT31_10900 PF13603 Leucyl-tRNA synthetase, Domain 2 NUT31_10900 PF08264 Anticodon-binding domain of tRNA NUT31_10915 PF01467 Cytidylyltransferase-like NUT31_10925 PF02590 Predicted SPOUT methyltransferase NUT31_10930 PF03717 Penicillin-binding Protein dimerisation domain NUT31_10930 PF00905 Penicillin binding protein transpeptidase domain NUT31_10935 PF01098 Cell cycle protein NUT31_10940 PF13406 Transglycosylase SLT domain NUT31_10945 PF03330 Lytic transglycolase NUT31_10945 PF05036 Sporulation related domain NUT31_10950 PF00768 D-alanyl-D-alanine carboxypeptidase NUT31_10950 PF07943 Penicillin-binding protein 5, C-terminal domain NUT31_10955 PF04359 Protein of unknown function (DUF493) NUT31_10960 PF03099 Biotin/lipoate A/B protein ligase family NUT31_10965 PF04055 Radical SAM superfamily NUT31_10965 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NUT31_10975 PF06821 Serine hydrolase NUT31_10980 PF02508 Rnf-Nqr subunit, membrane protein NUT31_10995 PF13411 MerR HTH family regulatory protein NUT31_11000 PF01368 DHH family NUT31_11000 PF17768 RecJ OB domain NUT31_11000 PF02272 DHHA1 domain NUT31_11005 PF10411 Disulfide bond isomerase protein N-terminus NUT31_11005 PF13098 Thioredoxin-like domain NUT31_11010 PF01741 Large-conductance mechanosensitive channel, MscL NUT31_11015 PF02899 Phage integrase, N-terminal SAM-like domain NUT31_11015 PF00589 Phage integrase family NUT31_11020 PF00258 Flavodoxin NUT31_11025 PF01523 Putative modulator of DNA gyrase NUT31_11030 PF01523 Putative modulator of DNA gyrase NUT31_11040 PF17969 L,D-transpeptidase C-terminal domain NUT31_11040 PF03734 L,D-transpeptidase catalytic domain NUT31_11045 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NUT31_11050 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NUT31_11070 PF01568 Molydopterin dinucleotide binding domain NUT31_11070 PF00384 Molybdopterin oxidoreductase NUT31_11070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NUT31_11075 PF03916 Polysulphide reductase, NrfD NUT31_11080 PF13247 4Fe-4S dicluster domain NUT31_11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_11085 PF00989 PAS fold NUT31_11085 PF00512 His Kinase A (phospho-acceptor) domain NUT31_11090 PF00072 Response regulator receiver domain NUT31_11090 PF00196 Bacterial regulatory proteins, luxR family NUT31_11095 PF06580 Histidine kinase NUT31_11095 PF07694 5TMR of 5TMR-LYT NUT31_11100 PF04397 LytTr DNA-binding domain NUT31_11100 PF00072 Response regulator receiver domain NUT31_11105 PF13722 5TM C-terminal transporter carbon starvation CstA NUT31_11105 PF02554 Carbon starvation protein CstA NUT31_11110 PF03575 Peptidase family S51 NUT31_11115 PF00206 Lyase NUT31_11115 PF10415 Fumarase C C-terminus NUT31_11125 PF02635 DsrE/DsrF-like family NUT31_11130 PF00990 Diguanylate cyclase, GGDEF domain NUT31_11135 PF07690 Major Facilitator Superfamily NUT31_11140 PF00013 KH domain NUT31_11140 PF01138 3' exoribonuclease family, domain 1 NUT31_11140 PF03725 3' exoribonuclease family, domain 2 NUT31_11140 PF00575 S1 RNA binding domain NUT31_11140 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NUT31_11145 PF00312 Ribosomal protein S15 NUT31_11150 PF09157 Pseudouridine synthase II TruB, C-terminal NUT31_11150 PF16198 tRNA pseudouridylate synthase B C-terminal domain NUT31_11150 PF01509 TruB family pseudouridylate synthase (N terminal domain) NUT31_11155 PF02033 Ribosome-binding factor A NUT31_11160 PF00009 Elongation factor Tu GTP binding domain NUT31_11160 PF11987 Translation-initiation factor 2 NUT31_11160 PF08364 Bacterial translation initiation factor IF-2 associated region NUT31_11160 PF04760 Translation initiation factor IF-2, N-terminal region NUT31_11165 PF00575 S1 RNA binding domain NUT31_11165 PF08529 NusA N-terminal domain NUT31_11165 PF13184 NusA-like KH domain NUT31_11170 PF02576 RimP N-terminal domain NUT31_11170 PF17384 RimP C-terminal SH3 domain NUT31_11185 PF03840 Preprotein translocase SecG subunit NUT31_11190 PF00121 Triosephosphate isomerase NUT31_11195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NUT31_11195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NUT31_11195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NUT31_11195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NUT31_11200 PF00809 Pterin binding enzyme NUT31_11205 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_11205 PF17862 AAA+ lid domain NUT31_11205 PF06480 FtsH Extracellular NUT31_11205 PF01434 Peptidase family M41 NUT31_11210 PF01728 FtsJ-like methyltransferase NUT31_11215 PF01985 CRS1 / YhbY (CRM) domain NUT31_11225 PF03449 Transcription elongation factor, N-terminal NUT31_11225 PF01272 Transcription elongation factor, GreA/GreB, C-term NUT31_11230 PF00691 OmpA family NUT31_11230 PF13677 Membrane MotB of proton-channel complex MotA/MotB NUT31_11230 PF13677 Membrane MotB of proton-channel complex MotA/MotB NUT31_11230 PF00691 OmpA family NUT31_11235 PF01618 MotA/TolQ/ExbB proton channel family NUT31_11240 PF02609 Exonuclease VII small subunit NUT31_11245 PF00348 Polyprenyl synthetase NUT31_11250 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NUT31_11250 PF02779 Transketolase, pyrimidine binding domain NUT31_11250 PF02780 Transketolase, C-terminal domain NUT31_11255 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_11255 PF12911 N-terminal TM domain of oligopeptide transport permease C NUT31_11260 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_11265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_11270 PF00005 ABC transporter NUT31_11270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NUT31_11275 PF04608 Phosphatidylglycerophosphatase A NUT31_11280 PF02769 AIR synthase related protein, C-terminal domain NUT31_11280 PF00586 AIR synthase related protein, N-terminal domain NUT31_11285 PF01029 NusB family NUT31_11290 PF00885 6,7-dimethyl-8-ribityllumazine synthase NUT31_11300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NUT31_11300 PF00925 GTP cyclohydrolase II NUT31_11305 PF00677 Lumazine binding domain NUT31_11310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NUT31_11310 PF01872 RibD C-terminal domain NUT31_11315 PF03477 ATP cone domain NUT31_11325 PF00464 Serine hydroxymethyltransferase NUT31_11340 PF02613 Nitrate reductase delta subunit NUT31_11360 PF03707 Bacterial signalling protein N terminal repeat NUT31_11360 PF13188 PAS domain NUT31_11360 PF00990 Diguanylate cyclase, GGDEF domain NUT31_11360 PF00563 EAL domain NUT31_11370 PF16177 Acetyl-coenzyme A synthetase N-terminus NUT31_11370 PF00501 AMP-binding enzyme NUT31_11370 PF13193 AMP-binding enzyme C-terminal domain NUT31_11375 PF01220 Dehydroquinase class II NUT31_11380 PF00364 Biotin-requiring enzyme NUT31_11385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NUT31_11385 PF00289 Biotin carboxylase, N-terminal domain NUT31_11385 PF02785 Biotin carboxylase C-terminal domain NUT31_11395 PF00474 Sodium:solute symporter family NUT31_11400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NUT31_11400 PF02378 Phosphotransferase system, EIIC NUT31_11400 PF00367 phosphotransferase system, EIIB NUT31_11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_11405 PF03466 LysR substrate binding domain NUT31_11410 PF08240 Alcohol dehydrogenase GroES-like domain NUT31_11410 PF00107 Zinc-binding dehydrogenase NUT31_11420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUT31_11420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUT31_11420 PF01842 ACT domain NUT31_11425 PF14602 Hexapeptide repeat of succinyl-transferase NUT31_11425 PF12464 Maltose acetyltransferase NUT31_11440 PF00881 Nitroreductase family NUT31_11445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NUT31_11445 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_11450 PF01343 Peptidase family S49 NUT31_11465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NUT31_11465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NUT31_11470 PF07023 Protein of unknown function (DUF1315) NUT31_11475 PF17763 Glutaminase/Asparaginase C-terminal domain NUT31_11475 PF00710 Asparaginase, N-terminal NUT31_11480 PF03616 Sodium/glutamate symporter NUT31_11485 PF00672 HAMP domain NUT31_11485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_11485 PF02743 Cache domain NUT31_11495 PF00152 tRNA synthetases class II (D, K and N) NUT31_11495 PF01336 OB-fold nucleic acid binding domain NUT31_11500 PF02567 Phenazine biosynthesis-like protein NUT31_11505 PF00667 FAD binding domain NUT31_11505 PF00258 Flavodoxin NUT31_11505 PF00175 Oxidoreductase NAD-binding domain NUT31_11510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NUT31_11510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NUT31_11515 PF01507 Phosphoadenosine phosphosulfate reductase family NUT31_11520 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NUT31_11525 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_11530 PF00005 ABC transporter NUT31_11530 PF00571 CBS domain NUT31_11535 PF00186 Dihydrofolate reductase NUT31_11540 PF12821 Threonine/Serine exporter, ThrE NUT31_11545 PF06738 Putative threonine/serine exporter NUT31_11555 PF00994 Probable molybdopterin binding domain NUT31_11565 PF02801 Beta-ketoacyl synthase, C-terminal domain NUT31_11565 PF00109 Beta-ketoacyl synthase, N-terminal domain NUT31_11580 PF00109 Beta-ketoacyl synthase, N-terminal domain NUT31_11580 PF02801 Beta-ketoacyl synthase, C-terminal domain NUT31_11605 PF00221 Aromatic amino acid lyase NUT31_11615 PF07977 FabA-like domain NUT31_11620 PF00501 AMP-binding enzyme NUT31_11620 PF13193 AMP-binding enzyme C-terminal domain NUT31_11630 PF00550 Phosphopantetheine attachment site NUT31_11635 PF00550 Phosphopantetheine attachment site NUT31_11670 PF00034 Cytochrome c NUT31_11670 PF03150 Di-haem cytochrome c peroxidase NUT31_11675 PF00194 Eukaryotic-type carbonic anhydrase NUT31_11685 PF04227 Indigoidine synthase A like protein NUT31_11690 PF00294 pfkB family carbohydrate kinase NUT31_11720 PF00582 Universal stress protein family NUT31_11730 PF00171 Aldehyde dehydrogenase family NUT31_11735 PF00696 Amino acid kinase family NUT31_11735 PF01472 PUA domain NUT31_11740 PF07417 Sigma factor-binding transcriptional regulator Crl NUT31_11745 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NUT31_11750 PF00156 Phosphoribosyl transferase domain NUT31_11755 PF07687 Peptidase dimerisation domain NUT31_11755 PF01546 Peptidase family M20/M25/M40 NUT31_11760 PF00005 ABC transporter NUT31_11760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NUT31_11765 PF00005 ABC transporter NUT31_11765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NUT31_11775 PF12911 N-terminal TM domain of oligopeptide transport permease C NUT31_11775 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_11780 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_11785 PF07715 TonB-dependent Receptor Plug Domain NUT31_11785 PF00593 TonB dependent receptor NUT31_11795 PF01618 MotA/TolQ/ExbB proton channel family NUT31_11800 PF01618 MotA/TolQ/ExbB proton channel family NUT31_11805 PF02472 Biopolymer transport protein ExbD/TolR NUT31_11820 PF00704 Glycosyl hydrolases family 18 NUT31_11820 PF06483 Chitinase C NUT31_11855 PF00749 tRNA synthetases class I (E and Q), catalytic domain NUT31_11860 PF00672 HAMP domain NUT31_11860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_11870 PF00313 'Cold-shock' DNA-binding domain NUT31_11890 PF00929 Exonuclease NUT31_11895 PF03193 RsgA GTPase NUT31_11900 PF02666 Phosphatidylserine decarboxylase NUT31_11905 PF09905 DNA-binding protein VF530 NUT31_11925 PF00990 Diguanylate cyclase, GGDEF domain NUT31_11925 PF00563 EAL domain NUT31_11925 PF03707 Bacterial signalling protein N terminal repeat NUT31_11930 PF06877 Regulator of ribonuclease activity B NUT31_11935 PF05547 Immune inhibitor A peptidase M6 NUT31_11935 PF00801 PKD domain NUT31_11975 PF00145 C-5 cytosine-specific DNA methylase NUT31_12010 PF02899 Phage integrase, N-terminal SAM-like domain NUT31_12010 PF00589 Phage integrase family NUT31_12035 PF00589 Phage integrase family NUT31_12055 PF00561 alpha/beta hydrolase fold NUT31_12060 PF00005 ABC transporter NUT31_12060 PF00664 ABC transporter transmembrane region NUT31_12065 PF06004 Bacterial protein of unknown function (DUF903) NUT31_12070 PF00581 Rhodanese-like domain NUT31_12075 PF04960 Glutaminase NUT31_12080 PF04320 Protein with unknown function (DUF469) NUT31_12085 PF02390 Putative methyltransferase NUT31_12090 PF01483 Proprotein convertase P-domain NUT31_12090 PF04389 Peptidase family M28 NUT31_12095 PF00155 Aminotransferase class I and II NUT31_12100 PF12792 CSS motif domain associated with EAL NUT31_12100 PF00563 EAL domain NUT31_12105 PF08338 Domain of unknown function (DUF1731) NUT31_12105 PF01370 NAD dependent epimerase/dehydratase family NUT31_12115 PF00005 ABC transporter NUT31_12120 PF13472 GDSL-like Lipase/Acylhydrolase family NUT31_12125 PF01584 CheW-like domain NUT31_12125 PF00072 Response regulator receiver domain NUT31_12135 PF06826 Predicted Permease Membrane Region NUT31_12135 PF02080 TrkA-C domain NUT31_12140 PF03006 Haemolysin-III related NUT31_12145 PF00282 Pyridoxal-dependent decarboxylase conserved domain NUT31_12150 PF04279 Intracellular septation protein A NUT31_12155 PF03795 YCII-related domain NUT31_12160 PF00459 Inositol monophosphatase family NUT31_12170 PF00483 Nucleotidyl transferase NUT31_12175 PF00854 POT family NUT31_12180 PF00072 Response regulator receiver domain NUT31_12210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_12215 PF02321 Outer membrane efflux protein NUT31_12220 PF01207 Dihydrouridine synthase (Dus) NUT31_12225 PF02954 Bacterial regulatory protein, Fis family NUT31_12230 PF01810 LysE type translocator NUT31_12255 PF01521 Iron-sulphur cluster biosynthesis NUT31_12265 PF00654 Voltage gated chloride channel NUT31_12270 PF00202 Aminotransferase class-III NUT31_12285 PF01569 PAP2 superfamily NUT31_12295 PF11849 Domain of unknown function (DUF3369) NUT31_12305 PF00893 Small Multidrug Resistance protein NUT31_12310 PF00893 Small Multidrug Resistance protein NUT31_12315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUT31_12320 PF00912 Transglycosylase NUT31_12320 PF00905 Penicillin binding protein transpeptidase domain NUT31_12320 PF14814 Bifunctional transglycosylase second domain NUT31_12325 PF00270 DEAD/DEAH box helicase NUT31_12325 PF04408 Helicase associated domain (HA2) NUT31_12325 PF00271 Helicase conserved C-terminal domain NUT31_12325 PF08482 ATP-dependent helicase C-terminal NUT31_12335 PF03749 Sugar fermentation stimulation protein RE domain NUT31_12335 PF17746 SfsA N-terminal OB domain NUT31_12340 PF01258 Prokaryotic dksA/traR C4-type zinc finger NUT31_12345 PF00749 tRNA synthetases class I (E and Q), catalytic domain NUT31_12350 PF01743 Poly A polymerase head domain NUT31_12350 PF12626 Polymerase A arginine-rich C-terminus NUT31_12350 PF12627 Probable RNA and SrmB- binding site of polymerase A NUT31_12355 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NUT31_12360 PF02548 Ketopantoate hydroxymethyltransferase NUT31_12365 PF02569 Pantoate-beta-alanine ligase NUT31_12370 PF00375 Sodium:dicarboxylate symporter family NUT31_12390 PF01869 BadF/BadG/BcrA/BcrD ATPase family NUT31_12395 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component NUT31_12400 PF01061 ABC-2 type transporter NUT31_12405 PF00005 ABC transporter NUT31_12410 PF00156 Phosphoribosyl transferase domain NUT31_12415 PF00440 Bacterial regulatory proteins, tetR family NUT31_12420 PF02441 Flavoprotein NUT31_12425 PF02875 Mur ligase family, glutamate ligase domain NUT31_12425 PF08245 Mur ligase middle domain NUT31_12425 PF01225 Mur ligase family, catalytic domain NUT31_12430 PF00719 Inorganic pyrophosphatase NUT31_12445 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NUT31_12460 PF00005 ABC transporter NUT31_12500 PF02080 TrkA-C domain NUT31_12500 PF03600 Citrate transporter NUT31_12505 PF00009 Elongation factor Tu GTP binding domain NUT31_12510 PF01507 Phosphoadenosine phosphosulfate reductase family NUT31_12515 PF10414 Sirohaem synthase dimerisation region NUT31_12515 PF14824 Sirohaem biosynthesis protein central NUT31_12515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NUT31_12520 PF01145 SPFH domain / Band 7 family NUT31_12520 PF16200 C-terminal region of band_7 NUT31_12525 PF01957 NfeD-like C-terminal, partner-binding NUT31_12530 PF00571 CBS domain NUT31_12530 PF01380 SIS domain NUT31_12535 PF00005 ABC transporter NUT31_12535 PF12848 ABC transporter NUT31_12545 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NUT31_12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_12550 PF03466 LysR substrate binding domain NUT31_12555 PF02525 Flavodoxin-like fold NUT31_12585 PF00561 alpha/beta hydrolase fold NUT31_12590 PF00474 Sodium:solute symporter family NUT31_12595 PF03734 L,D-transpeptidase catalytic domain NUT31_12595 PF17969 L,D-transpeptidase C-terminal domain NUT31_12600 PF00924 Mechanosensitive ion channel NUT31_12605 PF00871 Acetokinase family NUT31_12610 PF04074 YhcH/YjgK/YiaL NUT31_12620 PF07731 Multicopper oxidase NUT31_12620 PF00394 Multicopper oxidase NUT31_12620 PF07732 Multicopper oxidase NUT31_12620 PF00394 Multicopper oxidase NUT31_12620 PF07731 Multicopper oxidase NUT31_12620 PF07732 Multicopper oxidase NUT31_12630 PF01177 Asp/Glu/Hydantoin racemase NUT31_12635 PF01810 LysE type translocator NUT31_12645 PF00155 Aminotransferase class I and II NUT31_12645 PF00392 Bacterial regulatory proteins, gntR family NUT31_12670 PF00209 Sodium:neurotransmitter symporter family NUT31_12680 PF00209 Sodium:neurotransmitter symporter family NUT31_12700 PF07690 Major Facilitator Superfamily NUT31_12715 PF01037 Lrp/AsnC ligand binding domain NUT31_12730 PF01047 MarR family NUT31_12735 PF02566 OsmC-like protein NUT31_12740 PF16884 N-terminal domain of oxidoreductase NUT31_12740 PF00107 Zinc-binding dehydrogenase NUT31_12745 PF00293 NUDIX domain NUT31_12755 PF01641 SelR domain NUT31_12760 PF00128 Alpha amylase, catalytic domain NUT31_12760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUT31_12765 PF02806 Alpha amylase, C-terminal all-beta domain NUT31_12765 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUT31_12765 PF00128 Alpha amylase, catalytic domain NUT31_12770 PF02446 4-alpha-glucanotransferase NUT31_12775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NUT31_12775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NUT31_12780 PF01263 Aldose 1-epimerase NUT31_12785 PF02445 Quinolinate synthetase A protein NUT31_12790 PF00672 HAMP domain NUT31_12790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_12865 PF13174 Tetratricopeptide repeat NUT31_12865 PF16331 TolA binding protein trimerisation NUT31_12870 PF00691 OmpA family NUT31_12875 PF04052 TolB amino-terminal domain NUT31_12875 PF07676 WD40-like Beta Propeller Repeat NUT31_12885 PF02472 Biopolymer transport protein ExbD/TolR NUT31_12890 PF01618 MotA/TolQ/ExbB proton channel family NUT31_12895 PF03061 Thioesterase superfamily NUT31_12900 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NUT31_12905 PF08173 Membrane bound YbgT-like protein NUT31_12910 PF02322 Cytochrome bd terminal oxidase subunit II NUT31_12915 PF01654 Cytochrome bd terminal oxidase subunit I NUT31_12920 PF17864 RuvB AAA lid domain NUT31_12920 PF05491 RuvB C-terminal winged helix domain NUT31_12920 PF05496 Holliday junction DNA helicase RuvB P-loop domain NUT31_12925 PF07499 RuvA, C-terminal domain NUT31_12925 PF01330 RuvA N terminal domain NUT31_12930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_12930 PF00672 HAMP domain NUT31_12935 PF03129 Anticodon binding domain NUT31_12935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NUT31_12935 PF04073 Aminoacyl-tRNA editing domain NUT31_12940 PF00106 short chain dehydrogenase NUT31_12955 PF00378 Enoyl-CoA hydratase/isomerase NUT31_12960 PF10952 Protein of unknown function (DUF2753) NUT31_12965 PF00132 Bacterial transferase hexapeptide (six repeats) NUT31_12975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_12990 PF02594 Uncharacterised ACR, YggU family COG1872 NUT31_12995 PF02325 YGGT family NUT31_13000 PF14748 Pyrroline-5-carboxylate reductase dimerisation NUT31_13000 PF03807 NADP oxidoreductase coenzyme F420-dependent NUT31_13005 PF01168 Alanine racemase, N-terminal domain NUT31_13010 PF00437 Type II/IV secretion system protein NUT31_13015 PF00437 Type II/IV secretion system protein NUT31_13020 PF03883 Peroxide stress protein YaaA NUT31_13025 PF00271 Helicase conserved C-terminal domain NUT31_13025 PF00270 DEAD/DEAH box helicase NUT31_13030 PF05175 Methyltransferase small domain NUT31_13035 PF05525 Branched-chain amino acid transport protein NUT31_13040 PF05525 Branched-chain amino acid transport protein NUT31_13055 PF01475 Ferric uptake regulator family NUT31_13095 PF01207 Dihydrouridine synthase (Dus) NUT31_13110 PF00216 Bacterial DNA-binding protein NUT31_13120 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NUT31_13125 PF07238 PilZ domain NUT31_13130 PF18073 Rubredoxin metal binding domain NUT31_13145 PF18429 Domain of unknown function (DUF5609) NUT31_13155 PF00563 EAL domain NUT31_13155 PF00990 Diguanylate cyclase, GGDEF domain NUT31_13155 PF05231 MASE1 NUT31_13155 PF08447 PAS fold NUT31_13155 PF08448 PAS fold NUT31_13155 PF13426 PAS domain NUT31_13160 PF01048 Phosphorylase superfamily NUT31_13165 PF01676 Metalloenzyme superfamily NUT31_13170 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NUT31_13170 PF02885 Glycosyl transferase family, helical bundle domain NUT31_13170 PF00591 Glycosyl transferase family, a/b domain NUT31_13175 PF01791 DeoC/LacD family aldolase NUT31_13185 PF07670 Nucleoside recognition NUT31_13185 PF07662 Na+ dependent nucleoside transporter C-terminus NUT31_13185 PF01773 Na+ dependent nucleoside transporter N-terminus NUT31_13190 PF01026 TatD related DNase NUT31_13195 PF07963 Prokaryotic N-terminal methylation motif NUT31_13205 PF05958 tRNA (Uracil-5-)-methyltransferase NUT31_13205 PF01938 TRAM domain NUT31_13210 PF00909 Ammonium Transporter Family NUT31_13225 PF03739 Lipopolysaccharide export system permease LptF/LptG NUT31_13230 PF03739 Lipopolysaccharide export system permease LptF/LptG NUT31_13235 PF00883 Cytosol aminopeptidase family, catalytic domain NUT31_13235 PF02789 Cytosol aminopeptidase family, N-terminal domain NUT31_13240 PF04364 DNA polymerase III chi subunit, HolC NUT31_13245 PF08264 Anticodon-binding domain of tRNA NUT31_13245 PF00133 tRNA synthetases class I (I, L, M and V) NUT31_13245 PF10458 Valyl tRNA synthetase tRNA binding arm NUT31_13250 PF01595 Cyclin M transmembrane N-terminal domain NUT31_13250 PF00571 CBS domain NUT31_13250 PF03471 Transporter associated domain NUT31_13255 PF09335 SNARE associated Golgi protein NUT31_13260 PF00768 D-alanyl-D-alanine carboxypeptidase NUT31_13295 PF02599 Global regulator protein family NUT31_13300 PF00696 Amino acid kinase family NUT31_13300 PF01842 ACT domain NUT31_13300 PF13840 ACT domain NUT31_13305 PF02272 DHHA1 domain NUT31_13305 PF01411 tRNA synthetases class II (A) NUT31_13305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NUT31_13310 PF02631 RecX family NUT31_13315 PF00154 recA bacterial DNA recombination protein NUT31_13320 PF02464 Competence-damaged protein NUT31_13325 PF01624 MutS domain I NUT31_13325 PF05188 MutS domain II NUT31_13325 PF05192 MutS domain III NUT31_13325 PF05190 MutS family domain IV NUT31_13325 PF00488 MutS domain V NUT31_13330 PF02028 BCCT, betaine/carnitine/choline family transporter NUT31_13345 PF04222 Protein of unknown function (DUF416) NUT31_13350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUT31_13355 PF08525 Opacity-associated protein A N-terminal motif NUT31_13355 PF01476 LysM domain NUT31_13355 PF01551 Peptidase family M23 NUT31_13375 PF01297 Zinc-uptake complex component A periplasmic NUT31_13380 PF00005 ABC transporter NUT31_13385 PF00950 ABC 3 transport family NUT31_13390 PF03466 LysR substrate binding domain NUT31_13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_13395 PF00892 EamA-like transporter family NUT31_13400 PF03167 Uracil DNA glycosylase superfamily NUT31_13405 PF00892 EamA-like transporter family NUT31_13415 PF01541 GIY-YIG catalytic domain NUT31_13430 PF04012 PspA/IM30 family NUT31_13435 PF01553 Acyltransferase NUT31_13455 PF00578 AhpC/TSA family NUT31_13460 PF00226 DnaJ domain NUT31_13460 PF01556 DnaJ C terminal domain NUT31_13460 PF00684 DnaJ central domain NUT31_13500 PF07690 Major Facilitator Superfamily NUT31_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_13505 PF03466 LysR substrate binding domain NUT31_13515 PF00521 DNA gyrase/topoisomerase IV, subunit A NUT31_13515 PF03989 DNA gyrase C-terminal domain, beta-propeller NUT31_13520 PF00204 DNA gyrase B NUT31_13520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_13520 PF01751 Toprim domain NUT31_13520 PF00986 DNA gyrase B subunit, carboxyl terminus NUT31_13525 PF04632 Fusaric acid resistance protein family NUT31_13530 PF00529 HlyD membrane-fusion protein of T1SS NUT31_13530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_13535 PF07869 Protein of unknown function (DUF1656) NUT31_13545 PF00293 NUDIX domain NUT31_13550 PF05728 Uncharacterised protein family (UPF0227) NUT31_13555 PF00149 Calcineurin-like phosphoesterase NUT31_13560 PF06853 Protein of unknown function (DUF1249) NUT31_13565 PF00293 NUDIX domain NUT31_13570 PF02321 Outer membrane efflux protein NUT31_13575 PF01467 Cytidylyltransferase-like NUT31_13575 PF00294 pfkB family carbohydrate kinase NUT31_13580 PF03279 Bacterial lipid A biosynthesis acyltransferase NUT31_13595 PF01865 Protein of unknown function DUF47 NUT31_13600 PF01384 Phosphate transporter family NUT31_13605 PF04073 Aminoacyl-tRNA editing domain NUT31_13610 PF07350 Protein of unknown function (DUF1479) NUT31_13630 PF00155 Aminotransferase class I and II NUT31_13630 PF00392 Bacterial regulatory proteins, gntR family NUT31_13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_13640 PF03466 LysR substrate binding domain NUT31_13645 PF03788 LrgA family NUT31_13650 PF04172 LrgB-like family NUT31_13665 PF12627 Probable RNA and SrmB- binding site of polymerase A NUT31_13665 PF01966 HD domain NUT31_13665 PF01743 Poly A polymerase head domain NUT31_13670 PF13401 AAA domain NUT31_13670 PF01471 Putative peptidoglycan binding domain NUT31_13675 PF16537 Type II secretion system protein B NUT31_13680 PF10576 Iron-sulfur binding domain of endonuclease III NUT31_13680 PF00633 Helix-hairpin-helix motif NUT31_13680 PF00730 HhH-GPD superfamily base excision DNA repair protein NUT31_13680 PF14815 NUDIX domain NUT31_13685 PF04362 Bacterial Fe(2+) trafficking NUT31_13690 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NUT31_13690 PF01464 Transglycosylase SLT domain NUT31_13695 PF04076 Bacterial OB fold (BOF) protein NUT31_13700 PF00657 GDSL-like Lipase/Acylhydrolase NUT31_13710 PF00691 OmpA family NUT31_13710 PF01389 OmpA-like transmembrane domain NUT31_13715 PF03886 ABC-type transport auxiliary lipoprotein component NUT31_13720 PF02470 MlaD protein NUT31_13725 PF04403 Paraquat-inducible protein A NUT31_13730 PF17209 Hfq protein NUT31_13735 PF13419 Haloacid dehalogenase-like hydrolase NUT31_13745 PF00360 Phytochrome region NUT31_13745 PF01590 GAF domain NUT31_13745 PF00990 Diguanylate cyclase, GGDEF domain NUT31_13745 PF00563 EAL domain NUT31_13750 PF00701 Dihydrodipicolinate synthetase family NUT31_13755 PF08468 Methyltransferase small domain N-terminal NUT31_13755 PF05175 Methyltransferase small domain NUT31_13760 PF00483 Nucleotidyl transferase NUT31_13765 PF08323 Starch synthase catalytic domain NUT31_13765 PF00534 Glycosyl transferases group 1 NUT31_13805 PF03553 Na+/H+ antiporter family NUT31_13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_13810 PF03466 LysR substrate binding domain NUT31_13815 PF13416 Bacterial extracellular solute-binding protein NUT31_13820 PF00005 ABC transporter NUT31_13820 PF08402 TOBE domain NUT31_13825 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_13830 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_13835 PF00171 Aldehyde dehydrogenase family NUT31_13845 PF12464 Maltose acetyltransferase NUT31_13845 PF14602 Hexapeptide repeat of succinyl-transferase NUT31_13850 PF00128 Alpha amylase, catalytic domain NUT31_13850 PF11941 Domain of unknown function (DUF3459) NUT31_13855 PF00367 phosphotransferase system, EIIB NUT31_13855 PF02378 Phosphotransferase system, EIIC NUT31_13860 PF00356 Bacterial regulatory proteins, lacI family NUT31_13875 PF17763 Glutaminase/Asparaginase C-terminal domain NUT31_13875 PF00710 Asparaginase, N-terminal NUT31_13890 PF02142 MGS-like domain NUT31_13900 PF00210 Ferritin-like domain NUT31_13915 PF08351 Domain of unknown function (DUF1726) NUT31_13915 PF13718 GNAT acetyltransferase 2 NUT31_13915 PF17176 tRNA-binding domain NUT31_13915 PF05127 Helicase NUT31_13925 PF01584 CheW-like domain NUT31_13925 PF00072 Response regulator receiver domain NUT31_13930 PF07670 Nucleoside recognition NUT31_13965 PF02660 Glycerol-3-phosphate acyltransferase NUT31_13970 PF02152 Dihydroneopterin aldolase NUT31_13975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NUT31_13985 PF07690 Major Facilitator Superfamily NUT31_13990 PF07683 Cobalamin synthesis protein cobW C-terminal domain NUT31_13990 PF02492 CobW/HypB/UreG, nucleotide-binding domain NUT31_13995 PF01565 FAD binding domain NUT31_13995 PF04030 D-arabinono-1,4-lactone oxidase NUT31_14000 PF01810 LysE type translocator NUT31_14005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_14005 PF03466 LysR substrate binding domain NUT31_14010 PF06434 Aconitate hydratase 2 N-terminus NUT31_14010 PF00330 Aconitase family (aconitate hydratase) NUT31_14010 PF11791 Aconitate B N-terminal domain NUT31_14015 PF01734 Patatin-like phospholipase NUT31_14020 PF12729 Four helix bundle sensory module for signal transduction NUT31_14020 PF00672 HAMP domain NUT31_14020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_14025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_14025 PF12729 Four helix bundle sensory module for signal transduction NUT31_14025 PF00672 HAMP domain NUT31_14035 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_14035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NUT31_14040 PF00364 Biotin-requiring enzyme NUT31_14040 PF02817 e3 binding domain NUT31_14040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NUT31_14045 PF00456 Transketolase, thiamine diphosphate binding domain NUT31_14045 PF17831 Pyruvate dehydrogenase E1 component middle domain NUT31_14050 PF00392 Bacterial regulatory proteins, gntR family NUT31_14050 PF07729 FCD domain NUT31_14055 PF01510 N-acetylmuramoyl-L-alanine amidase NUT31_14065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NUT31_14065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NUT31_14070 PF07963 Prokaryotic N-terminal methylation motif NUT31_14075 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NUT31_14075 PF00437 Type II/IV secretion system protein NUT31_14080 PF00482 Type II secretion system (T2SS), protein F NUT31_14085 PF01478 Type IV leader peptidase family NUT31_14085 PF06750 Bacterial Peptidase A24 N-terminal domain NUT31_14090 PF01121 Dephospho-CoA kinase NUT31_14095 PF07072 Cell division protein NUT31_14100 PF03884 DNA gyrase inhibitor YacG NUT31_14105 PF00293 NUDIX domain NUT31_14115 PF01043 SecA preprotein cross-linking domain NUT31_14115 PF07516 SecA Wing and Scaffold domain NUT31_14115 PF07517 SecA DEAD-like domain NUT31_14115 PF02810 SEC-C motif NUT31_14125 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NUT31_14130 PF00091 Tubulin/FtsZ family, GTPase domain NUT31_14130 PF12327 FtsZ family, C-terminal domain NUT31_14135 PF02491 SHS2 domain inserted in FTSA NUT31_14140 PF08478 POTRA domain, FtsQ-type NUT31_14140 PF03799 Cell division protein FtsQ NUT31_14145 PF02875 Mur ligase family, glutamate ligase domain NUT31_14145 PF01225 Mur ligase family, catalytic domain NUT31_14145 PF08245 Mur ligase middle domain NUT31_14150 PF04101 Glycosyltransferase family 28 C-terminal domain NUT31_14150 PF03033 Glycosyltransferase family 28 N-terminal domain NUT31_14155 PF01098 Cell cycle protein NUT31_14160 PF02875 Mur ligase family, glutamate ligase domain NUT31_14160 PF08245 Mur ligase middle domain NUT31_14165 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NUT31_14165 PF00953 Glycosyl transferase family 4 NUT31_14170 PF08245 Mur ligase middle domain NUT31_14170 PF02875 Mur ligase family, glutamate ligase domain NUT31_14170 PF01225 Mur ligase family, catalytic domain NUT31_14175 PF02875 Mur ligase family, glutamate ligase domain NUT31_14175 PF01225 Mur ligase family, catalytic domain NUT31_14175 PF08245 Mur ligase middle domain NUT31_14180 PF00905 Penicillin binding protein transpeptidase domain NUT31_14180 PF03717 Penicillin-binding Protein dimerisation domain NUT31_14185 PF04999 Cell division protein FtsL NUT31_14190 PF01795 MraW methylase family NUT31_14195 PF02381 MraZ protein, putative antitoxin-like NUT31_14205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NUT31_14210 PF04348 LppC putative lipoprotein NUT31_14215 PF02021 Uncharacterised protein family UPF0102 NUT31_14220 PF13580 SIS domain NUT31_14225 PF04972 BON domain NUT31_14230 PF04386 Stringent starvation protein B NUT31_14235 PF02798 Glutathione S-transferase, N-terminal domain NUT31_14235 PF00043 Glutathione S-transferase, C-terminal domain NUT31_14240 PF02167 Cytochrome C1 family NUT31_14245 PF00033 Cytochrome b/b6/petB NUT31_14245 PF00032 Cytochrome b(C-terminal)/b6/petD NUT31_14250 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NUT31_14250 PF00355 Rieske [2Fe-2S] domain NUT31_14255 PF00380 Ribosomal protein S9/S16 NUT31_14260 PF00572 Ribosomal protein L13 NUT31_14265 PF03969 AFG1-like ATPase NUT31_14275 PF13180 PDZ domain NUT31_14275 PF00595 PDZ domain NUT31_14280 PF13180 PDZ domain NUT31_14310 PF01979 Amidohydrolase family NUT31_14315 PF03841 L-seryl-tRNA selenium transferase NUT31_14320 PF07071 KDGP aldolase NUT31_14325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUT31_14325 PF00874 PRD domain NUT31_14325 PF05043 Mga helix-turn-helix domain NUT31_14325 PF08279 HTH domain NUT31_14330 PF00381 PTS HPr component phosphorylation site NUT31_14335 PF03668 P-loop ATPase protein family NUT31_14340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUT31_14345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NUT31_14350 PF04963 Sigma-54 factor, core binding domain NUT31_14350 PF00309 Sigma-54 factor, Activator interacting domain (AID) NUT31_14350 PF04552 Sigma-54, DNA binding domain NUT31_14355 PF00005 ABC transporter NUT31_14355 PF12399 Branched-chain amino acid ATP-binding cassette transporter NUT31_14360 PF03968 OstA-like protein NUT31_14365 PF06835 Lipopolysaccharide-assembly, LptC-related NUT31_14375 PF00571 CBS domain NUT31_14375 PF01380 SIS domain NUT31_14380 PF00005 ABC transporter NUT31_14385 PF02405 Permease MlaE NUT31_14390 PF02470 MlaD protein NUT31_14395 PF05494 MlaC protein NUT31_14405 PF01722 BolA-like protein NUT31_14410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NUT31_14415 PF01523 Putative modulator of DNA gyrase NUT31_14420 PF04751 Protein of unknown function (DUF615) NUT31_14430 PF04363 Protein of unknown function (DUF496) NUT31_14460 PF01381 Helix-turn-helix NUT31_14460 PF07883 Cupin domain NUT31_14465 PF03594 Benzoate membrane transport protein NUT31_14475 PF02219 Methylenetetrahydrofolate reductase NUT31_14490 PF12729 Four helix bundle sensory module for signal transduction NUT31_14490 PF00672 HAMP domain NUT31_14490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_14495 PF03922 OmpW family NUT31_14500 PF00990 Diguanylate cyclase, GGDEF domain NUT31_14505 PF17760 UvrA interaction domain NUT31_14505 PF17755 UvrA DNA-binding domain NUT31_14505 PF00005 ABC transporter NUT31_14510 PF00196 Bacterial regulatory proteins, luxR family NUT31_14515 PF00436 Single-strand binding protein family NUT31_14530 PF16916 Dimerisation domain of Zinc Transporter NUT31_14530 PF01545 Cation efflux family NUT31_14540 PF00313 'Cold-shock' DNA-binding domain NUT31_14545 PF00593 TonB dependent receptor NUT31_14545 PF07715 TonB-dependent Receptor Plug Domain NUT31_14550 PF08448 PAS fold NUT31_14550 PF00990 Diguanylate cyclase, GGDEF domain NUT31_14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_14555 PF00512 His Kinase A (phospho-acceptor) domain NUT31_14555 PF00672 HAMP domain NUT31_14560 PF00072 Response regulator receiver domain NUT31_14560 PF00486 Transcriptional regulatory protein, C terminal NUT31_14580 PF00990 Diguanylate cyclase, GGDEF domain NUT31_14590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUT31_14600 PF13538 UvrD-like helicase C-terminal domain NUT31_14605 PF13361 UvrD-like helicase C-terminal domain NUT31_14605 PF00580 UvrD/REP helicase N-terminal domain NUT31_14605 PF12705 PD-(D/E)XK nuclease superfamily NUT31_14610 PF17946 RecC C-terminal domain NUT31_14615 PF07681 DoxX NUT31_14620 PF17954 Quercetinase C-terminal cupin domain NUT31_14620 PF02678 Pirin NUT31_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_14630 PF03466 LysR substrate binding domain NUT31_14640 PF07702 UTRA domain NUT31_14640 PF00392 Bacterial regulatory proteins, gntR family NUT31_14655 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_14665 PF12857 TOBE-like domain NUT31_14665 PF00005 ABC transporter NUT31_14675 PF00990 Diguanylate cyclase, GGDEF domain NUT31_14695 PF00583 Acetyltransferase (GNAT) family NUT31_14700 PF00199 Catalase NUT31_14700 PF06628 Catalase-related immune-responsive NUT31_14725 PF01569 PAP2 superfamily NUT31_14730 PF01594 AI-2E family transporter NUT31_14735 PF00106 short chain dehydrogenase NUT31_14740 PF04371 Porphyromonas-type peptidyl-arginine deiminase NUT31_14745 PF03466 LysR substrate binding domain NUT31_14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_14750 PF00158 Sigma-54 interaction domain NUT31_14750 PF02954 Bacterial regulatory protein, Fis family NUT31_14750 PF00989 PAS fold NUT31_14755 PF00465 Iron-containing alcohol dehydrogenase NUT31_14760 PF05524 PEP-utilising enzyme, N-terminal NUT31_14760 PF03610 PTS system fructose IIA component NUT31_14760 PF00391 PEP-utilising enzyme, mobile domain NUT31_14760 PF00381 PTS HPr component phosphorylation site NUT31_14765 PF02734 DAK2 domain NUT31_14770 PF02733 Dak1 domain NUT31_14775 PF00860 Permease family NUT31_14820 PF03143 Elongation factor Tu C-terminal domain NUT31_14820 PF03144 Elongation factor Tu domain 2 NUT31_14820 PF00009 Elongation factor Tu GTP binding domain NUT31_14825 PF14492 Elongation Factor G, domain II NUT31_14825 PF03764 Elongation factor G, domain IV NUT31_14825 PF00009 Elongation factor Tu GTP binding domain NUT31_14825 PF03144 Elongation factor Tu domain 2 NUT31_14825 PF00679 Elongation factor G C-terminus NUT31_14830 PF00177 Ribosomal protein S7p/S5e NUT31_14835 PF00164 Ribosomal protein S12/S23 NUT31_14840 PF04077 DsrH like protein NUT31_14845 PF02635 DsrE/DsrF-like family NUT31_14850 PF02635 DsrE/DsrF-like family NUT31_14855 PF01042 Endoribonuclease L-PSP NUT31_14860 PF13309 HTH domain NUT31_14860 PF08348 YheO-like PAS domain NUT31_14865 PF04997 RNA polymerase Rpb1, domain 1 NUT31_14865 PF00623 RNA polymerase Rpb1, domain 2 NUT31_14865 PF04998 RNA polymerase Rpb1, domain 5 NUT31_14865 PF04983 RNA polymerase Rpb1, domain 3 NUT31_14865 PF05000 RNA polymerase Rpb1, domain 4 NUT31_14870 PF04563 RNA polymerase beta subunit NUT31_14870 PF04561 RNA polymerase Rpb2, domain 2 NUT31_14870 PF04565 RNA polymerase Rpb2, domain 3 NUT31_14870 PF10385 RNA polymerase beta subunit external 1 domain NUT31_14870 PF00562 RNA polymerase Rpb2, domain 6 NUT31_14870 PF04560 RNA polymerase Rpb2, domain 7 NUT31_14875 PF16320 Ribosomal protein L7/L12 dimerisation domain NUT31_14875 PF00542 Ribosomal protein L7/L12 C-terminal domain NUT31_14880 PF00466 Ribosomal protein L10 NUT31_14885 PF00687 Ribosomal protein L1p/L10e family NUT31_14890 PF00298 Ribosomal protein L11, RNA binding domain NUT31_14890 PF03946 Ribosomal protein L11, N-terminal domain NUT31_14895 PF00467 KOW motif NUT31_14895 PF02357 Transcription termination factor nusG NUT31_14900 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NUT31_14910 PF03143 Elongation factor Tu C-terminal domain NUT31_14910 PF03144 Elongation factor Tu domain 2 NUT31_14910 PF00009 Elongation factor Tu GTP binding domain NUT31_14925 PF00485 Phosphoribulokinase / Uridine kinase family NUT31_14930 PF02237 Biotin protein ligase C terminal domain NUT31_14930 PF08279 HTH domain NUT31_14930 PF03099 Biotin/lipoate A/B protein ligase family NUT31_14935 PF01565 FAD binding domain NUT31_14935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NUT31_14940 PF02080 TrkA-C domain NUT31_14940 PF02254 TrkA-N domain NUT31_14945 PF02386 Cation transport protein NUT31_14950 PF12852 Cupin NUT31_14950 PF12833 Helix-turn-helix domain NUT31_14965 PF01131 DNA topoisomerase NUT31_14965 PF01751 Toprim domain NUT31_14970 PF03264 NapC/NirT cytochrome c family, N-terminal region NUT31_14975 PF00384 Molybdopterin oxidoreductase NUT31_14975 PF01568 Molydopterin dinucleotide binding domain NUT31_14975 PF18364 Molybdopterin oxidoreductase N-terminal domain NUT31_14985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_14990 PF00072 Response regulator receiver domain NUT31_14990 PF00486 Transcriptional regulatory protein, C terminal NUT31_15005 PF01794 Ferric reductase like transmembrane component NUT31_15010 PF00174 Oxidoreductase molybdopterin binding domain NUT31_15015 PF06496 Protein of unknown function (DUF1097) NUT31_15020 PF00072 Response regulator receiver domain NUT31_15020 PF00158 Sigma-54 interaction domain NUT31_15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_15030 PF00512 His Kinase A (phospho-acceptor) domain NUT31_15050 PF00478 IMP dehydrogenase / GMP reductase domain NUT31_15050 PF00571 CBS domain NUT31_15055 PF10063 Uncharacterized integral membrane protein (DUF2301) NUT31_15065 PF01037 Lrp/AsnC ligand binding domain NUT31_15070 PF03590 Aspartate-ammonia ligase NUT31_15080 PF10431 C-terminal, D2-small domain, of ClpB protein NUT31_15080 PF07724 AAA domain (Cdc48 subfamily) NUT31_15080 PF02861 Clp amino terminal domain, pathogenicity island component NUT31_15080 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_15080 PF17871 AAA lid domain NUT31_15085 PF02578 Multi-copper polyphenol oxidoreductase laccase NUT31_15090 PF00849 RNA pseudouridylate synthase NUT31_15090 PF01479 S4 domain NUT31_15095 PF13525 Outer membrane lipoprotein NUT31_15100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_15100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NUT31_15105 PF00375 Sodium:dicarboxylate symporter family NUT31_15110 PF03313 Serine dehydratase alpha chain NUT31_15120 PF02233 NAD(P) transhydrogenase beta subunit NUT31_15125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NUT31_15125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NUT31_15125 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NUT31_15130 PF00465 Iron-containing alcohol dehydrogenase NUT31_15135 PF06719 AraC-type transcriptional regulator N-terminus NUT31_15135 PF12833 Helix-turn-helix domain NUT31_15140 PF08212 Lipocalin-like domain NUT31_15145 PF02743 Cache domain NUT31_15145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_15145 PF00672 HAMP domain NUT31_15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_15155 PF03466 LysR substrate binding domain NUT31_15165 PF02666 Phosphatidylserine decarboxylase NUT31_15185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NUT31_15185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NUT31_15190 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NUT31_15190 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NUT31_15195 PF01316 Arginine repressor, DNA binding domain NUT31_15195 PF02863 Arginine repressor, C-terminal domain NUT31_15200 PF03606 C4-dicarboxylate anaerobic carrier NUT31_15205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NUT31_15205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NUT31_15210 PF00696 Amino acid kinase family NUT31_15235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_15235 PF00672 HAMP domain NUT31_15235 PF02743 Cache domain NUT31_15240 PF02653 Branched-chain amino acid transport system / permease component NUT31_15245 PF00005 ABC transporter NUT31_15250 PF13407 Periplasmic binding protein domain NUT31_15255 PF02929 Beta galactosidase small chain NUT31_15255 PF16353 Domain of unknown function(DUF4981) NUT31_15255 PF00703 Glycosyl hydrolases family 2 NUT31_15255 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NUT31_15255 PF02837 Glycosyl hydrolases family 2, sugar binding domain NUT31_15260 PF00356 Bacterial regulatory proteins, lacI family NUT31_15265 PF16363 GDP-mannose 4,6 dehydratase NUT31_15270 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NUT31_15270 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NUT31_15275 PF00288 GHMP kinases N terminal domain NUT31_15275 PF08544 GHMP kinases C terminal NUT31_15275 PF10509 Galactokinase galactose-binding signature NUT31_15280 PF01263 Aldose 1-epimerase NUT31_15285 PF00248 Aldo/keto reductase family NUT31_15290 PF02673 Bacitracin resistance protein BacA NUT31_15295 PF12973 ChrR Cupin-like domain NUT31_15300 PF04542 Sigma-70 region 2 NUT31_15300 PF04545 Sigma-70, region 4 NUT31_15310 PF03485 Arginyl tRNA synthetase N terminal domain NUT31_15310 PF05746 DALR anticodon binding domain NUT31_15310 PF00750 tRNA synthetases class I (R) NUT31_15320 PF00227 Proteasome subunit NUT31_15325 PF00004 ATPase family associated with various cellular activities (AAA) NUT31_15325 PF07724 AAA domain (Cdc48 subfamily) NUT31_15325 PF10431 C-terminal, D2-small domain, of ClpB protein NUT31_15330 PF07690 Major Facilitator Superfamily NUT31_15345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_15350 PF00005 ABC transporter NUT31_15365 PF04324 BFD-like [2Fe-2S] binding domain NUT31_15365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NUT31_15365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NUT31_15365 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_15365 PF18267 Rubredoxin NAD+ reductase C-terminal domain NUT31_15370 PF13806 Rieske-like [2Fe-2S] domain NUT31_15375 PF01226 Formate/nitrite transporter NUT31_15380 PF10414 Sirohaem synthase dimerisation region NUT31_15380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NUT31_15380 PF14824 Sirohaem biosynthesis protein central NUT31_15385 PF01769 Divalent cation transporter NUT31_15385 PF00571 CBS domain NUT31_15385 PF03448 MgtE intracellular N domain NUT31_15390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_15390 PF00672 HAMP domain NUT31_15395 PF03737 Aldolase/RraA NUT31_15400 PF02592 Putative vitamin uptake transporter NUT31_15410 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NUT31_15415 PF00034 Cytochrome c NUT31_15420 PF00271 Helicase conserved C-terminal domain NUT31_15420 PF16124 RecQ zinc-binding NUT31_15420 PF09382 RQC domain NUT31_15420 PF00570 HRDC domain NUT31_15420 PF00270 DEAD/DEAH box helicase NUT31_15425 PF03061 Thioesterase superfamily NUT31_15440 PF03473 MOSC domain NUT31_15440 PF03475 3-alpha domain NUT31_15445 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_15450 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_15455 PF08402 TOBE domain NUT31_15455 PF00005 ABC transporter NUT31_15460 PF13416 Bacterial extracellular solute-binding protein NUT31_15465 PF13416 Bacterial extracellular solute-binding protein NUT31_15470 PF00202 Aminotransferase class-III NUT31_15475 PF00120 Glutamine synthetase, catalytic domain NUT31_15480 PF01258 Prokaryotic dksA/traR C4-type zinc finger NUT31_15495 PF05981 CreA protein NUT31_15500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUT31_15500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUT31_15505 PF00012 Hsp70 protein NUT31_15520 PF02903 Alpha amylase, N-terminal ig-like domain NUT31_15520 PF00128 Alpha amylase, catalytic domain NUT31_15525 PF02719 Polysaccharide biosynthesis protein NUT31_15530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NUT31_15540 PF16861 Carbamoyltransferase C-terminus NUT31_15540 PF02543 Carbamoyltransferase N-terminus NUT31_15550 PF01209 ubiE/COQ5 methyltransferase family NUT31_15555 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NUT31_15575 PF03275 UDP-galactopyranose mutase NUT31_15580 PF00535 Glycosyl transferase family 2 NUT31_15595 PF13193 AMP-binding enzyme C-terminal domain NUT31_15595 PF00501 AMP-binding enzyme NUT31_15615 PF02348 Cytidylyltransferase NUT31_15625 PF03102 NeuB family NUT31_15625 PF08666 SAF domain NUT31_15645 PF16221 winged helix-turn-helix NUT31_15645 PF16254 Domain of unknown function (DUF4910) NUT31_15645 PF09940 Domain of unknown function (DUF2172) NUT31_15680 PF05958 tRNA (Uracil-5-)-methyltransferase NUT31_15685 PF00486 Transcriptional regulatory protein, C terminal NUT31_15685 PF00072 Response regulator receiver domain NUT31_15690 PF00512 His Kinase A (phospho-acceptor) domain NUT31_15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_15690 PF00672 HAMP domain NUT31_15700 PF03949 Malic enzyme, NAD binding domain NUT31_15700 PF00390 Malic enzyme, N-terminal domain NUT31_15705 PF11066 Protein of unknown function (DUF2867) NUT31_15705 PF13460 NAD(P)H-binding NUT31_15710 PF01197 Ribosomal protein L31 NUT31_15715 PF00270 DEAD/DEAH box helicase NUT31_15715 PF00271 Helicase conserved C-terminal domain NUT31_15715 PF17764 3′ DNA-binding domain (3′BD) NUT31_15715 PF18074 Primosomal protein N C-terminal domain NUT31_15715 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NUT31_15725 PF00691 OmpA family NUT31_15725 PF01389 OmpA-like transmembrane domain NUT31_15730 PF00585 C-terminal regulatory domain of Threonine dehydratase NUT31_15730 PF00291 Pyridoxal-phosphate dependent enzyme NUT31_15735 PF00920 Dehydratase family NUT31_15740 PF01063 Amino-transferase class IV NUT31_15750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NUT31_15750 PF00205 Thiamine pyrophosphate enzyme, central domain NUT31_15750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NUT31_15755 PF01078 Magnesium chelatase, subunit ChlI NUT31_15755 PF13335 Magnesium chelatase, subunit ChlI C-terminal NUT31_15760 PF01553 Acyltransferase NUT31_15765 PF01553 Acyltransferase NUT31_15770 PF04463 Protein of unknown function (DUF523) NUT31_15780 PF00857 Isochorismatase family NUT31_15785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NUT31_15785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NUT31_15790 PF01323 DSBA-like thioredoxin domain NUT31_15795 PF01636 Phosphotransferase enzyme family NUT31_15800 PF12801 4Fe-4S binding domain NUT31_15800 PF13746 4Fe-4S dicluster domain NUT31_15800 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NUT31_15805 PF06288 Protein of unknown function (DUF1040) NUT31_15810 PF01590 GAF domain NUT31_15810 PF00360 Phytochrome region NUT31_15810 PF00990 Diguanylate cyclase, GGDEF domain NUT31_15810 PF00563 EAL domain NUT31_15815 PF13411 MerR HTH family regulatory protein NUT31_15820 PF00403 Heavy-metal-associated domain NUT31_15825 PF00156 Phosphoribosyl transferase domain NUT31_15830 PF01138 3' exoribonuclease family, domain 1 NUT31_15830 PF03725 3' exoribonuclease family, domain 2 NUT31_15835 PF03755 YicC-like family, N-terminal region NUT31_15835 PF08340 Domain of unknown function (DUF1732) NUT31_15840 PF00282 Pyridoxal-dependent decarboxylase conserved domain NUT31_15850 PF00501 AMP-binding enzyme NUT31_15850 PF00668 Condensation domain NUT31_15850 PF00550 Phosphopantetheine attachment site NUT31_15855 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NUT31_15860 PF00550 Phosphopantetheine attachment site NUT31_15860 PF13193 AMP-binding enzyme C-terminal domain NUT31_15860 PF00668 Condensation domain NUT31_15860 PF07993 Male sterility protein NUT31_15860 PF00501 AMP-binding enzyme NUT31_15870 PF00664 ABC transporter transmembrane region NUT31_15870 PF00005 ABC transporter NUT31_15870 PF08021 Siderophore-interacting FAD-binding domain NUT31_15870 PF04954 Siderophore-interacting protein NUT31_15875 PF00005 ABC transporter NUT31_15880 PF01032 FecCD transport family NUT31_15885 PF01032 FecCD transport family NUT31_15890 PF00005 ABC transporter NUT31_15895 PF01497 Periplasmic binding protein NUT31_15900 PF00593 TonB dependent receptor NUT31_15900 PF07715 TonB-dependent Receptor Plug Domain NUT31_15920 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) NUT31_15925 PF04932 O-Antigen ligase NUT31_15935 PF01370 NAD dependent epimerase/dehydratase family NUT31_15940 PF08360 QacR-like protein, C-terminal region NUT31_15940 PF00440 Bacterial regulatory proteins, tetR family NUT31_15945 PF00155 Aminotransferase class I and II NUT31_15950 PF08240 Alcohol dehydrogenase GroES-like domain NUT31_15950 PF00107 Zinc-binding dehydrogenase NUT31_15955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NUT31_15960 PF00563 EAL domain NUT31_15960 PF00990 Diguanylate cyclase, GGDEF domain NUT31_15960 PF03707 Bacterial signalling protein N terminal repeat NUT31_15965 PF00580 UvrD/REP helicase N-terminal domain NUT31_15965 PF13361 UvrD-like helicase C-terminal domain NUT31_15970 PF00266 Aminotransferase class-V NUT31_15975 PF02657 Fe-S metabolism associated domain NUT31_15980 PF00899 ThiF family NUT31_16015 PF12724 Flavodoxin domain NUT31_16020 PF02386 Cation transport protein NUT31_16025 PF01205 Uncharacterized protein family UPF0029 NUT31_16025 PF09186 Domain of unknown function (DUF1949) NUT31_16030 PF00557 Metallopeptidase family M24 NUT31_16035 PF13193 AMP-binding enzyme C-terminal domain NUT31_16035 PF00501 AMP-binding enzyme NUT31_16040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NUT31_16040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NUT31_16040 PF00378 Enoyl-CoA hydratase/isomerase NUT31_16045 PF02803 Thiolase, C-terminal domain NUT31_16045 PF00108 Thiolase, N-terminal domain NUT31_16050 PF00072 Response regulator receiver domain NUT31_16050 PF00486 Transcriptional regulatory protein, C terminal NUT31_16055 PF00512 His Kinase A (phospho-acceptor) domain NUT31_16055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_16055 PF00672 HAMP domain NUT31_16060 PF01547 Bacterial extracellular solute-binding protein NUT31_16070 PF01206 Sulfurtransferase TusA NUT31_16075 PF01042 Endoribonuclease L-PSP NUT31_16080 PF13488 Glycine zipper NUT31_16080 PF00691 OmpA family NUT31_16085 PF00672 HAMP domain NUT31_16085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_16085 PF02743 Cache domain NUT31_16090 PF03352 Methyladenine glycosylase NUT31_16095 PF02091 Glycyl-tRNA synthetase alpha subunit NUT31_16100 PF02092 Glycyl-tRNA synthetase beta subunit NUT31_16100 PF05746 DALR anticodon binding domain NUT31_16110 PF02224 Cytidylate kinase NUT31_16130 PF03222 Tryptophan/tyrosine permease family NUT31_16135 PF12801 4Fe-4S binding domain NUT31_16140 PF00392 Bacterial regulatory proteins, gntR family NUT31_16140 PF07702 UTRA domain NUT31_16145 PF02378 Phosphotransferase system, EIIC NUT31_16145 PF00367 phosphotransferase system, EIIB NUT31_16150 PF11975 Family 4 glycosyl hydrolase C-terminal domain NUT31_16150 PF02056 Family 4 glycosyl hydrolase NUT31_16155 PF00356 Bacterial regulatory proteins, lacI family NUT31_16160 PF13458 Periplasmic binding protein NUT31_16165 PF02653 Branched-chain amino acid transport system / permease component NUT31_16170 PF02653 Branched-chain amino acid transport system / permease component NUT31_16170 PF11862 Domain of unknown function (DUF3382) NUT31_16175 PF00005 ABC transporter NUT31_16175 PF12399 Branched-chain amino acid ATP-binding cassette transporter NUT31_16180 PF00005 ABC transporter NUT31_16195 PF00581 Rhodanese-like domain NUT31_16200 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NUT31_16200 PF01694 Rhomboid family NUT31_16205 PF12262 Bacterial virulence factor lipase N-terminal NUT31_16210 PF04380 Membrane fusogenic activity NUT31_16215 PF00175 Oxidoreductase NAD-binding domain NUT31_16220 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NUT31_16230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NUT31_16230 PF07498 Rho termination factor, N-terminal domain NUT31_16230 PF07497 Rho termination factor, RNA-binding domain NUT31_16235 PF00085 Thioredoxin NUT31_16240 PF00270 DEAD/DEAH box helicase NUT31_16240 PF00271 Helicase conserved C-terminal domain NUT31_16245 PF02541 Ppx/GppA phosphatase family NUT31_16255 PF04445 Putative SAM-dependent methyltransferase NUT31_16260 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_16265 PF03707 Bacterial signalling protein N terminal repeat NUT31_16265 PF00990 Diguanylate cyclase, GGDEF domain NUT31_16265 PF00563 EAL domain NUT31_16270 PF01432 Peptidase family M3 NUT31_16275 PF00490 Delta-aminolevulinic acid dehydratase NUT31_16280 PF01026 TatD related DNase NUT31_16285 PF00902 Sec-independent protein translocase protein (TatC) NUT31_16290 PF02416 mttA/Hcf106 family NUT31_16295 PF02416 mttA/Hcf106 family NUT31_16300 PF03109 ABC1 family NUT31_16305 PF02036 SCP-2 sterol transfer family NUT31_16310 PF01209 ubiE/COQ5 methyltransferase family NUT31_16315 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NUT31_16320 PF07969 Amidohydrolase family NUT31_16360 PF03544 Gram-negative bacterial TonB protein C-terminal NUT31_16365 PF02472 Biopolymer transport protein ExbD/TolR NUT31_16370 PF01618 MotA/TolQ/ExbB proton channel family NUT31_16375 PF01618 MotA/TolQ/ExbB proton channel family NUT31_16385 PF00196 Bacterial regulatory proteins, luxR family NUT31_16385 PF03472 Autoinducer binding domain NUT31_16390 PF01380 SIS domain NUT31_16395 PF00455 DeoR C terminal sensor domain NUT31_16395 PF08220 DeoR-like helix-turn-helix domain NUT31_16400 PF00072 Response regulator receiver domain NUT31_16400 PF00486 Transcriptional regulatory protein, C terminal NUT31_16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_16405 PF00512 His Kinase A (phospho-acceptor) domain NUT31_16405 PF00672 HAMP domain NUT31_16410 PF00905 Penicillin binding protein transpeptidase domain NUT31_16415 PF06123 Inner membrane protein CreD NUT31_16420 PF00132 Bacterial transferase hexapeptide (six repeats) NUT31_16420 PF12804 MobA-like NTP transferase domain NUT31_16420 PF14602 Hexapeptide repeat of succinyl-transferase NUT31_16425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NUT31_16425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NUT31_16430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NUT31_16430 PF02874 ATP synthase alpha/beta family, beta-barrel domain NUT31_16435 PF00231 ATP synthase NUT31_16440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NUT31_16440 PF00306 ATP synthase alpha/beta chain, C terminal domain NUT31_16440 PF02874 ATP synthase alpha/beta family, beta-barrel domain NUT31_16445 PF00213 ATP synthase delta (OSCP) subunit NUT31_16450 PF00430 ATP synthase B/B' CF(0) NUT31_16455 PF00137 ATP synthase subunit C NUT31_16460 PF00119 ATP synthase A chain NUT31_16470 PF17762 HTH domain found in ParB protein NUT31_16470 PF02195 ParB-like nuclease domain NUT31_16475 PF13614 AAA domain NUT31_16480 PF02527 rRNA small subunit methyltransferase G NUT31_16485 PF01134 Glucose inhibited division protein A NUT31_16485 PF13932 GidA associated domain NUT31_16490 PF00258 Flavodoxin NUT31_16495 PF07715 TonB-dependent Receptor Plug Domain NUT31_16495 PF00593 TonB dependent receptor NUT31_16500 PF00005 ABC transporter NUT31_16505 PF00005 ABC transporter NUT31_16515 PF01032 FecCD transport family NUT31_16520 PF10396 GTP-binding protein TrmE N-terminus NUT31_16520 PF01926 50S ribosome-binding GTPase NUT31_16520 PF12631 MnmE helical domain NUT31_16525 PF02096 60Kd inner membrane protein NUT31_16525 PF14849 YidC periplasmic domain NUT31_16530 PF01809 Putative membrane protein insertion efficiency factor NUT31_16535 PF00825 Ribonuclease P NUT31_16540 PF00468 Ribosomal protein L34 NUT31_16545 PF00005 ABC transporter NUT31_16550 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_16555 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_16560 PF11638 DnaA N-terminal domain NUT31_16560 PF00308 Bacterial dnaA protein NUT31_16560 PF08299 Bacterial dnaA protein helix-turn-helix NUT31_16565 PF00712 DNA polymerase III beta subunit, N-terminal domain NUT31_16565 PF02767 DNA polymerase III beta subunit, central domain NUT31_16565 PF02768 DNA polymerase III beta subunit, C-terminal domain NUT31_16570 PF02463 RecF/RecN/SMC N terminal domain NUT31_16575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_16575 PF18053 DNA gyrase B subunit insert domain NUT31_16575 PF00986 DNA gyrase B subunit, carboxyl terminus NUT31_16575 PF00204 DNA gyrase B NUT31_16575 PF01751 Toprim domain NUT31_16585 PF08279 HTH domain NUT31_16585 PF13280 WYL domain NUT31_16590 PF12833 Helix-turn-helix domain NUT31_16590 PF01965 DJ-1/PfpI family NUT31_16595 PF12706 Beta-lactamase superfamily domain NUT31_16600 PF00011 Hsp20/alpha crystallin family NUT31_16605 PF00011 Hsp20/alpha crystallin family NUT31_16610 PF00155 Aminotransferase class I and II NUT31_16625 PF07690 Major Facilitator Superfamily NUT31_16630 PF00072 Response regulator receiver domain NUT31_16630 PF00486 Transcriptional regulatory protein, C terminal NUT31_16635 PF13493 Domain of unknown function (DUF4118) NUT31_16635 PF00512 His Kinase A (phospho-acceptor) domain NUT31_16635 PF02702 Osmosensitive K+ channel His kinase sensor domain NUT31_16635 PF13492 GAF domain NUT31_16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_16640 PF02669 K+-transporting ATPase, c chain NUT31_16650 PF03814 Potassium-transporting ATPase A subunit NUT31_16655 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUT31_16655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NUT31_16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_16660 PF00512 His Kinase A (phospho-acceptor) domain NUT31_16660 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_16665 PF00873 AcrB/AcrD/AcrF family NUT31_16670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_16675 PF00440 Bacterial regulatory proteins, tetR family NUT31_16705 PF00224 Pyruvate kinase, barrel domain NUT31_16705 PF02887 Pyruvate kinase, alpha/beta domain NUT31_16710 PF07690 Major Facilitator Superfamily NUT31_16720 PF00672 HAMP domain NUT31_16720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_16720 PF00512 His Kinase A (phospho-acceptor) domain NUT31_16725 PF14532 Sigma-54 interaction domain NUT31_16725 PF00072 Response regulator receiver domain NUT31_16725 PF02954 Bacterial regulatory protein, Fis family NUT31_16740 PF12146 Serine aminopeptidase, S33 NUT31_16745 PF00132 Bacterial transferase hexapeptide (six repeats) NUT31_16750 PF00588 SpoU rRNA Methylase family NUT31_16750 PF12105 SpoU, rRNA methylase, C-terminal NUT31_16755 PF04607 Region found in RelA / SpoT proteins NUT31_16755 PF02824 TGS domain NUT31_16755 PF13291 ACT domain NUT31_16760 PF01192 RNA polymerase Rpb6 NUT31_16765 PF00625 Guanylate kinase NUT31_16770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NUT31_16785 PF00892 EamA-like transporter family NUT31_16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_16805 PF03466 LysR substrate binding domain NUT31_16810 PF00579 tRNA synthetases class I (W and Y) NUT31_16815 PF00582 Universal stress protein family NUT31_16820 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NUT31_16820 PF07055 Enoyl reductase FAD binding domain NUT31_16820 PF12241 Trans-2-enoyl-CoA reductase catalytic region NUT31_16825 PF00990 Diguanylate cyclase, GGDEF domain NUT31_16830 PF00210 Ferritin-like domain NUT31_16840 PF07690 Major Facilitator Superfamily NUT31_16845 PF01810 LysE type translocator NUT31_16860 PF16967 E-set like domain NUT31_16860 PF15976 CS1-pili formation C-terminal NUT31_16865 PF18649 EcpB C-terminal domain NUT31_16870 PF16449 Fimbrillin MatB NUT31_16875 PF00196 Bacterial regulatory proteins, luxR family NUT31_16875 PF00072 Response regulator receiver domain NUT31_16880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_16880 PF00512 His Kinase A (phospho-acceptor) domain NUT31_16880 PF01627 Hpt domain NUT31_16880 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_16880 PF00072 Response regulator receiver domain NUT31_16880 PF00989 PAS fold NUT31_16890 PF07694 5TMR of 5TMR-LYT NUT31_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_16890 PF06580 Histidine kinase NUT31_16895 PF00072 Response regulator receiver domain NUT31_16895 PF04397 LytTr DNA-binding domain NUT31_16900 PF07690 Major Facilitator Superfamily NUT31_16905 PF02222 ATP-grasp domain NUT31_16905 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NUT31_16910 PF00731 AIR carboxylase NUT31_16925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_16925 PF03466 LysR substrate binding domain NUT31_16930 PF00593 TonB dependent receptor NUT31_16930 PF07715 TonB-dependent Receptor Plug Domain NUT31_16935 PF01177 Asp/Glu/Hydantoin racemase NUT31_16965 PF13607 Succinyl-CoA ligase like flavodoxin domain NUT31_16965 PF00583 Acetyltransferase (GNAT) family NUT31_16965 PF13380 CoA binding domain NUT31_16980 PF03466 LysR substrate binding domain NUT31_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_16985 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NUT31_16985 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NUT31_16990 PF00342 Phosphoglucose isomerase NUT31_17000 PF05552 Conserved TM helix NUT31_17000 PF00924 Mechanosensitive ion channel NUT31_17005 PF00440 Bacterial regulatory proteins, tetR family NUT31_17010 PF00692 dUTPase NUT31_17015 PF04127 DNA / pantothenate metabolism flavoprotein NUT31_17015 PF02441 Flavoprotein NUT31_17020 PF04002 RadC-like JAB domain NUT31_17025 PF00830 Ribosomal L28 family NUT31_17030 PF00471 Ribosomal protein L33 NUT31_17040 PF06827 Zinc finger found in FPG and IleRS NUT31_17040 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NUT31_17040 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NUT31_17045 PF04393 Protein of unknown function (DUF535) NUT31_17050 PF01467 Cytidylyltransferase-like NUT31_17055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NUT31_17060 PF00535 Glycosyl transferase family 2 NUT31_17065 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NUT31_17070 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NUT31_17075 PF03611 PTS system sugar-specific permease component NUT31_17085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUT31_17090 PF00356 Bacterial regulatory proteins, lacI family NUT31_17090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NUT31_17095 PF08240 Alcohol dehydrogenase GroES-like domain NUT31_17095 PF00107 Zinc-binding dehydrogenase NUT31_17115 PF03748 Flagellar basal body-associated protein FliL NUT31_17120 PF04345 Chorismate lyase NUT31_17125 PF01040 UbiA prenyltransferase family NUT31_17130 PF01553 Acyltransferase NUT31_17135 PF01726 LexA DNA binding domain NUT31_17135 PF00717 Peptidase S24-like NUT31_17145 PF02630 SCO1/SenC NUT31_17150 PF01554 MatE NUT31_17155 PF00588 SpoU rRNA Methylase family NUT31_17160 PF16527 Two-component sensor protein CpxA, periplasmic domain NUT31_17160 PF00672 HAMP domain NUT31_17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_17160 PF00512 His Kinase A (phospho-acceptor) domain NUT31_17165 PF00486 Transcriptional regulatory protein, C terminal NUT31_17165 PF00072 Response regulator receiver domain NUT31_17170 PF01545 Cation efflux family NUT31_17170 PF16916 Dimerisation domain of Zinc Transporter NUT31_17175 PF00132 Bacterial transferase hexapeptide (six repeats) NUT31_17175 PF06426 Serine acetyltransferase, N-terminal NUT31_17185 PF06005 Cell division protein ZapB NUT31_17195 PF01367 5'-3' exonuclease, C-terminal SAM fold NUT31_17195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NUT31_17195 PF00476 DNA polymerase family A NUT31_17195 PF01612 3'-5' exonuclease NUT31_17200 PF00132 Bacterial transferase hexapeptide (six repeats) NUT31_17235 PF00356 Bacterial regulatory proteins, lacI family NUT31_17240 PF02837 Glycosyl hydrolases family 2, sugar binding domain NUT31_17240 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NUT31_17240 PF16353 Domain of unknown function(DUF4981) NUT31_17240 PF00703 Glycosyl hydrolases family 2 NUT31_17240 PF02929 Beta galactosidase small chain NUT31_17245 PF04074 YhcH/YjgK/YiaL NUT31_17250 PF13520 Amino acid permease NUT31_17255 PF01588 Putative tRNA binding domain NUT31_17260 PF13520 Amino acid permease NUT31_17265 PF13593 SBF-like CPA transporter family (DUF4137) NUT31_17270 PF03781 Sulfatase-modifying factor enzyme 1 NUT31_17270 PF12867 DinB superfamily NUT31_17280 PF00756 Putative esterase NUT31_17285 PF08240 Alcohol dehydrogenase GroES-like domain NUT31_17285 PF00107 Zinc-binding dehydrogenase NUT31_17290 PF03466 LysR substrate binding domain NUT31_17290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_17295 PF02653 Branched-chain amino acid transport system / permease component NUT31_17300 PF02653 Branched-chain amino acid transport system / permease component NUT31_17305 PF00005 ABC transporter NUT31_17310 PF02608 ABC transporter substrate-binding protein PnrA-like NUT31_17315 PF00580 UvrD/REP helicase N-terminal domain NUT31_17315 PF13361 UvrD-like helicase C-terminal domain NUT31_17345 PF03466 LysR substrate binding domain NUT31_17345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_17360 PF14001 YdfZ protein NUT31_17390 PF06206 CpeT/CpcT family (DUF1001) NUT31_17405 PF04143 Sulphur transport NUT31_17410 PF00689 Cation transporting ATPase, C-terminus NUT31_17410 PF00690 Cation transporter/ATPase, N-terminus NUT31_17415 PF01810 LysE type translocator NUT31_17420 PF12833 Helix-turn-helix domain NUT31_17425 PF00892 EamA-like transporter family NUT31_17435 PF00171 Aldehyde dehydrogenase family NUT31_17440 PF07883 Cupin domain NUT31_17440 PF01381 Helix-turn-helix NUT31_17445 PF00202 Aminotransferase class-III NUT31_17450 PF00171 Aldehyde dehydrogenase family NUT31_17455 PF00117 Glutamine amidotransferase class-I NUT31_17455 PF00958 GMP synthase C terminal domain NUT31_17455 PF02540 NAD synthase NUT31_17460 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NUT31_17460 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NUT31_17465 PF00294 pfkB family carbohydrate kinase NUT31_17470 PF02082 Transcriptional regulator NUT31_17485 PF02646 RmuC family NUT31_17490 PF02386 Cation transport protein NUT31_17495 PF02254 TrkA-N domain NUT31_17495 PF02080 TrkA-C domain NUT31_17500 PF01189 16S rRNA methyltransferase RsmB/F NUT31_17500 PF01029 NusB family NUT31_17505 PF02911 Formyl transferase, C-terminal domain NUT31_17505 PF00551 Formyl transferase NUT31_17510 PF01327 Polypeptide deformylase NUT31_17520 PF02481 DNA recombination-mediator protein A NUT31_17520 PF17782 DprA winged helix domain NUT31_17525 PF04361 Protein of unknown function (DUF494) NUT31_17530 PF01396 Topoisomerase DNA binding C4 zinc finger NUT31_17535 PF00731 AIR carboxylase NUT31_17540 PF01300 Telomere recombination NUT31_17545 PF01218 Coproporphyrinogen III oxidase NUT31_17550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NUT31_17550 PF01488 Shikimate / quinate 5-dehydrogenase NUT31_17550 PF08501 Shikimate dehydrogenase substrate binding domain NUT31_17555 PF07369 Protein of unknown function (DUF1488) NUT31_17560 PF01926 50S ribosome-binding GTPase NUT31_17565 PF00034 Cytochrome c NUT31_17570 PF04220 Der GTPase activator (YihI) NUT31_17575 PF10675 Protein of unknown function (DUF2489) NUT31_17580 PF06969 HemN C-terminal domain NUT31_17580 PF04055 Radical SAM superfamily NUT31_17585 PF00962 Adenosine/AMP deaminase NUT31_17590 PF00072 Response regulator receiver domain NUT31_17590 PF02954 Bacterial regulatory protein, Fis family NUT31_17590 PF00158 Sigma-54 interaction domain NUT31_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_17595 PF00512 His Kinase A (phospho-acceptor) domain NUT31_17595 PF00989 PAS fold NUT31_17605 PF03951 Glutamine synthetase, beta-Grasp domain NUT31_17605 PF00120 Glutamine synthetase, catalytic domain NUT31_17610 PF00679 Elongation factor G C-terminus NUT31_17610 PF03144 Elongation factor Tu domain 2 NUT31_17610 PF00009 Elongation factor Tu GTP binding domain NUT31_17615 PF03631 Virulence factor BrkB NUT31_17620 PF02580 D-Tyr-tRNA(Tyr) deacylase NUT31_17630 PF00583 Acetyltransferase (GNAT) family NUT31_17630 PF09500 Putative thioesterase (yiiD_Cterm) NUT31_17640 PF00270 DEAD/DEAH box helicase NUT31_17640 PF00271 Helicase conserved C-terminal domain NUT31_17640 PF17191 RecG wedge domain NUT31_17645 PF13091 PLD-like domain NUT31_17650 PF02447 GntP family permease NUT31_17655 PF01202 Shikimate kinase NUT31_17660 PF00920 Dehydratase family NUT31_17665 PF01081 KDPG and KHG aldolase NUT31_17670 PF00356 Bacterial regulatory proteins, lacI family NUT31_17670 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NUT31_17680 PF01551 Peptidase family M23 NUT31_17685 PF01676 Metalloenzyme superfamily NUT31_17685 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NUT31_17690 PF00581 Rhodanese-like domain NUT31_17695 PF02556 Preprotein translocase subunit SecB NUT31_17700 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NUT31_17700 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NUT31_17705 PF01521 Iron-sulphur cluster biosynthesis NUT31_17705 PF01106 NifU-like domain NUT31_17710 PF00156 Phosphoribosyl transferase domain NUT31_17715 PF00561 alpha/beta hydrolase fold NUT31_17735 PF17674 HHH domain NUT31_17735 PF00575 S1 RNA binding domain NUT31_17735 PF09371 Tex-like protein N-terminal domain NUT31_17735 PF16921 Tex protein YqgF-like domain NUT31_17740 PF01272 Transcription elongation factor, GreA/GreB, C-term NUT31_17740 PF03449 Transcription elongation factor, N-terminal NUT31_17745 PF00486 Transcriptional regulatory protein, C terminal NUT31_17745 PF00072 Response regulator receiver domain NUT31_17750 PF00512 His Kinase A (phospho-acceptor) domain NUT31_17750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_17750 PF00672 HAMP domain NUT31_17760 PF00338 Ribosomal protein S10p/S20e NUT31_17765 PF00297 Ribosomal protein L3 NUT31_17770 PF00573 Ribosomal protein L4/L1 family NUT31_17775 PF00276 Ribosomal protein L23 NUT31_17780 PF00181 Ribosomal Proteins L2, RNA binding domain NUT31_17780 PF03947 Ribosomal Proteins L2, C-terminal domain NUT31_17785 PF00203 Ribosomal protein S19 NUT31_17790 PF00237 Ribosomal protein L22p/L17e NUT31_17795 PF00189 Ribosomal protein S3, C-terminal domain NUT31_17795 PF07650 KH domain NUT31_17800 PF00252 Ribosomal protein L16p/L10e NUT31_17805 PF00831 Ribosomal L29 protein NUT31_17810 PF00366 Ribosomal protein S17 NUT31_17815 PF00238 Ribosomal protein L14p/L23e NUT31_17820 PF00467 KOW motif NUT31_17820 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NUT31_17825 PF00281 Ribosomal protein L5 NUT31_17825 PF00673 ribosomal L5P family C-terminus NUT31_17830 PF00253 Ribosomal protein S14p/S29e NUT31_17835 PF00410 Ribosomal protein S8 NUT31_17840 PF00347 Ribosomal protein L6 NUT31_17845 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NUT31_17850 PF00333 Ribosomal protein S5, N-terminal domain NUT31_17850 PF03719 Ribosomal protein S5, C-terminal domain NUT31_17855 PF00327 Ribosomal protein L30p/L7e NUT31_17860 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NUT31_17865 PF00344 SecY translocase NUT31_17870 PF00444 Ribosomal protein L36 NUT31_17875 PF00416 Ribosomal protein S13/S18 NUT31_17880 PF00411 Ribosomal protein S11 NUT31_17885 PF00163 Ribosomal protein S4/S9 N-terminal domain NUT31_17885 PF01479 S4 domain NUT31_17890 PF01000 RNA polymerase Rpb3/RpoA insert domain NUT31_17890 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NUT31_17890 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NUT31_17895 PF01196 Ribosomal protein L17 NUT31_17945 PF02254 TrkA-N domain NUT31_17945 PF00999 Sodium/hydrogen exchanger family NUT31_17950 PF02525 Flavodoxin-like fold NUT31_17955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_17955 PF03466 LysR substrate binding domain NUT31_17960 PF00106 short chain dehydrogenase NUT31_17975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NUT31_17975 PF00326 Prolyl oligopeptidase family NUT31_18000 PF07947 YhhN family NUT31_18005 PF07690 Major Facilitator Superfamily NUT31_18010 PF13533 Biotin-lipoyl like NUT31_18015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_18015 PF03466 LysR substrate binding domain NUT31_18025 PF00375 Sodium:dicarboxylate symporter family NUT31_18030 PF10678 Protein of unknown function (DUF2492) NUT31_18035 PF01914 MarC family integral membrane protein NUT31_18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_18040 PF03466 LysR substrate binding domain NUT31_18045 PF02416 mttA/Hcf106 family NUT31_18055 PF01464 Transglycosylase SLT domain NUT31_18065 PF13091 PLD-like domain NUT31_18075 PF00440 Bacterial regulatory proteins, tetR family NUT31_18080 PF07226 Protein of unknown function (DUF1422) NUT31_18095 PF00448 SRP54-type protein, GTPase domain NUT31_18095 PF02881 SRP54-type protein, helical bundle domain NUT31_18100 PF00005 ABC transporter NUT31_18105 PF18075 FtsX extracellular domain NUT31_18110 PF00140 Sigma-70 factor, region 1.2 NUT31_18110 PF04542 Sigma-70 region 2 NUT31_18110 PF04545 Sigma-70, region 4 NUT31_18115 PF00484 Carbonic anhydrase NUT31_18120 PF00392 Bacterial regulatory proteins, gntR family NUT31_18120 PF07702 UTRA domain NUT31_18125 PF01979 Amidohydrolase family NUT31_18130 PF00491 Arginase family NUT31_18135 PF17392 Urocanase C-terminal domain NUT31_18135 PF17391 Urocanase N-terminal domain NUT31_18135 PF01175 Urocanase Rossmann-like domain NUT31_18140 PF00221 Aromatic amino acid lyase NUT31_18145 PF01699 Sodium/calcium exchanger protein NUT31_18150 PF00563 EAL domain NUT31_18150 PF12792 CSS motif domain associated with EAL NUT31_18155 PF00990 Diguanylate cyclase, GGDEF domain NUT31_18155 PF00563 EAL domain NUT31_18155 PF17157 Gammaproteobacterial periplasmic sensor domain NUT31_18185 PF00263 Bacterial type II and III secretion system protein NUT31_18185 PF03958 Bacterial type II/III secretion system short domain NUT31_18190 PF13401 AAA domain NUT31_18190 PF09077 Mu B transposition protein, C terminal NUT31_18200 PF00437 Type II/IV secretion system protein NUT31_18200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NUT31_18205 PF00482 Type II secretion system (T2SS), protein F NUT31_18215 PF07963 Prokaryotic N-terminal methylation motif NUT31_18225 PF00114 Pilin (bacterial filament) NUT31_18225 PF07963 Prokaryotic N-terminal methylation motif NUT31_18255 PF04085 rod shape-determining protein MreC NUT31_18260 PF04093 rod shape-determining protein MreD NUT31_18265 PF02545 Maf-like protein NUT31_18270 PF10150 Ribonuclease E/G family NUT31_18270 PF00575 S1 RNA binding domain NUT31_18275 PF13502 AsmA-like C-terminal region NUT31_18275 PF13116 Protein of unknown function NUT31_18285 PF00795 Carbon-nitrogen hydrolase NUT31_18290 PF01523 Putative modulator of DNA gyrase NUT31_18295 PF01380 SIS domain NUT31_18295 PF01418 Helix-turn-helix domain, rpiR family NUT31_18310 PF00367 phosphotransferase system, EIIB NUT31_18310 PF02378 Phosphotransferase system, EIIC NUT31_18315 PF13580 SIS domain NUT31_18330 PF01914 MarC family integral membrane protein NUT31_18335 PF07690 Major Facilitator Superfamily NUT31_18345 PF00072 Response regulator receiver domain NUT31_18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_18350 PF01627 Hpt domain NUT31_18350 PF00072 Response regulator receiver domain NUT31_18350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NUT31_18350 PF00512 His Kinase A (phospho-acceptor) domain NUT31_18350 PF00672 HAMP domain NUT31_18355 PF13581 Histidine kinase-like ATPase domain NUT31_18360 PF08678 Rsbr N terminal NUT31_18360 PF01740 STAS domain NUT31_18365 PF13426 PAS domain NUT31_18365 PF08447 PAS fold NUT31_18365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_18380 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NUT31_18385 PF04228 Putative neutral zinc metallopeptidase NUT31_18395 PF08668 HDOD domain NUT31_18410 PF00999 Sodium/hydrogen exchanger family NUT31_18415 PF02607 B12 binding domain NUT31_18415 PF02965 Vitamin B12 dependent methionine synthase, activation domain NUT31_18415 PF00809 Pterin binding enzyme NUT31_18415 PF02574 Homocysteine S-methyltransferase NUT31_18415 PF02310 B12 binding domain NUT31_18420 PF08443 RimK-like ATP-grasp domain NUT31_18420 PF18030 RimK PreATP-grasp domain NUT31_18425 PF05525 Branched-chain amino acid transport protein NUT31_18430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_18435 PF00072 Response regulator receiver domain NUT31_18435 PF00486 Transcriptional regulatory protein, C terminal NUT31_18450 PF05935 Arylsulfotransferase (ASST) NUT31_18450 PF17425 Arylsulfotransferase Ig-like domain NUT31_18455 PF01964 Radical SAM ThiC family NUT31_18455 PF13667 ThiC-associated domain NUT31_18460 PF02581 Thiamine monophosphate synthase NUT31_18465 PF00899 ThiF family NUT31_18475 PF05690 Thiazole biosynthesis protein ThiG NUT31_18480 PF06968 Biotin and Thiamin Synthesis associated domain NUT31_18480 PF04055 Radical SAM superfamily NUT31_18495 PF13036 Peptidoglycan-synthase activator LpoB NUT31_18515 PF17151 Periplasmic sensor domain NUT31_18515 PF00990 Diguanylate cyclase, GGDEF domain NUT31_18525 PF06055 Exopolysaccharide synthesis, ExoD NUT31_18540 PF08803 Putative mono-oxygenase ydhR NUT31_18545 PF01638 HxlR-like helix-turn-helix NUT31_18570 PF07715 TonB-dependent Receptor Plug Domain NUT31_18570 PF00593 TonB dependent receptor NUT31_18585 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NUT31_18590 PF03692 Putative zinc- or iron-chelating domain NUT31_18600 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NUT31_18605 PF02602 Uroporphyrinogen-III synthase HemD NUT31_18610 PF03900 Porphobilinogen deaminase, C-terminal domain NUT31_18610 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NUT31_18615 PF12633 Adenylate cyclase NT domain NUT31_18615 PF01295 Adenylate cyclase, class-I NUT31_18620 PF02230 Phospholipase/Carboxylesterase NUT31_18625 PF01491 Frataxin-like domain NUT31_18635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NUT31_18635 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NUT31_18640 PF01678 Diaminopimelate epimerase NUT31_18650 PF02899 Phage integrase, N-terminal SAM-like domain NUT31_18650 PF00589 Phage integrase family NUT31_18655 PF13419 Haloacid dehalogenase-like hydrolase NUT31_18665 PF00027 Cyclic nucleotide-binding domain NUT31_18665 PF13545 Crp-like helix-turn-helix domain NUT31_18675 PF07722 Peptidase C26 NUT31_18690 PF00994 Probable molybdopterin binding domain NUT31_18690 PF02464 Competence-damaged protein NUT31_18695 PF00013 KH domain NUT31_18695 PF01966 HD domain NUT31_18695 PF12072 Domain of unknown function (DUF3552) NUT31_18700 PF04204 Homoserine O-succinyltransferase NUT31_18710 PF01037 Lrp/AsnC ligand binding domain NUT31_18715 PF00884 Sulfatase NUT31_18730 PF00128 Alpha amylase, catalytic domain NUT31_18730 PF02903 Alpha amylase, N-terminal ig-like domain NUT31_18730 PF16657 Maltogenic Amylase, C-terminal domain NUT31_18735 PF02308 MgtC family NUT31_18755 PF00106 short chain dehydrogenase NUT31_18760 PF03577 Peptidase family C69 NUT31_18775 PF00465 Iron-containing alcohol dehydrogenase NUT31_18785 PF01053 Cys/Met metabolism PLP-dependent enzyme NUT31_18795 PF12793 Sugar transport-related sRNA regulator N-term NUT31_18795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NUT31_18810 PF03280 Proteobacterial lipase chaperone protein NUT31_18815 PF00561 alpha/beta hydrolase fold NUT31_18825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NUT31_18825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NUT31_18830 PF02698 DUF218 domain NUT31_18835 PF01752 Collagenase NUT31_18835 PF08453 Peptidase family M9 N-terminal NUT31_18845 PF00419 Fimbrial protein NUT31_18855 PF00577 Outer membrane usher protein NUT31_18855 PF13953 PapC C-terminal domain NUT31_18855 PF13954 PapC N-terminal domain NUT31_18860 PF02753 Pili assembly chaperone PapD, C-terminal domain NUT31_18860 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NUT31_18870 PF00419 Fimbrial protein NUT31_18880 PF00501 AMP-binding enzyme NUT31_18885 PF13378 Enolase C-terminal domain-like NUT31_18890 PF00378 Enoyl-CoA hydratase/isomerase NUT31_18895 PF12697 Alpha/beta hydrolase family NUT31_18900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NUT31_18900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NUT31_18900 PF16582 Middle domain of thiamine pyrophosphate NUT31_18905 PF00425 chorismate binding enzyme NUT31_18910 PF01040 UbiA prenyltransferase family NUT31_18935 PF03880 DbpA RNA binding domain NUT31_18935 PF00271 Helicase conserved C-terminal domain NUT31_18935 PF00270 DEAD/DEAH box helicase NUT31_18940 PF07670 Nucleoside recognition NUT31_18940 PF07662 Na+ dependent nucleoside transporter C-terminus NUT31_18940 PF01773 Na+ dependent nucleoside transporter N-terminus NUT31_18945 PF04307 LexA-binding, inner membrane-associated putative hydrolase NUT31_18960 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NUT31_18965 PF01544 CorA-like Mg2+ transporter protein NUT31_18985 PF03471 Transporter associated domain NUT31_18985 PF00999 Sodium/hydrogen exchanger family NUT31_18985 PF02080 TrkA-C domain NUT31_18990 PF05068 Mannitol repressor NUT31_18995 PF01232 Mannitol dehydrogenase Rossmann domain NUT31_18995 PF08125 Mannitol dehydrogenase C-terminal domain NUT31_19000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NUT31_19000 PF02378 Phosphotransferase system, EIIC NUT31_19000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUT31_19010 PF00440 Bacterial regulatory proteins, tetR family NUT31_19015 PF17876 Cold shock domain NUT31_19015 PF08206 Ribonuclease B OB domain NUT31_19015 PF00773 RNB domain NUT31_19020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_19020 PF03466 LysR substrate binding domain NUT31_19025 PF00765 Autoinducer synthase NUT31_19030 PF00196 Bacterial regulatory proteins, luxR family NUT31_19030 PF03472 Autoinducer binding domain NUT31_19035 PF01810 LysE type translocator NUT31_19040 PF02872 5'-nucleotidase, C-terminal domain NUT31_19040 PF00149 Calcineurin-like phosphoesterase NUT31_19045 PF05433 Glycine zipper 2TM domain NUT31_19050 PF00583 Acetyltransferase (GNAT) family NUT31_19055 PF11756 Nitrous oxide-stimulated promoter NUT31_19060 PF00557 Metallopeptidase family M24 NUT31_19060 PF01321 Creatinase/Prolidase N-terminal domain NUT31_19065 PF00392 Bacterial regulatory proteins, gntR family NUT31_19070 PF01293 Phosphoenolpyruvate carboxykinase NUT31_19075 PF01430 Hsp33 protein NUT31_19080 PF01479 S4 domain NUT31_19085 PF11356 Type II secretion system protein C NUT31_19090 PF00263 Bacterial type II and III secretion system protein NUT31_19090 PF03958 Bacterial type II/III secretion system short domain NUT31_19095 PF00437 Type II/IV secretion system protein NUT31_19100 PF00482 Type II secretion system (T2SS), protein F NUT31_19105 PF08334 Type II secretion system (T2SS), protein G NUT31_19105 PF07963 Prokaryotic N-terminal methylation motif NUT31_19115 PF12019 Type II transport protein GspH NUT31_19115 PF07963 Prokaryotic N-terminal methylation motif NUT31_19120 PF07963 Prokaryotic N-terminal methylation motif NUT31_19120 PF02501 Type II secretion system (T2SS), protein I NUT31_19125 PF11612 Type II secretion system (T2SS), protein J NUT31_19125 PF07963 Prokaryotic N-terminal methylation motif NUT31_19130 PF03934 Type II secretion system (T2SS), protein K NUT31_19135 PF12693 GspL periplasmic domain NUT31_19135 PF05134 Type II secretion system (T2SS), protein L NUT31_19140 PF04612 Type II secretion system (T2SS), protein M NUT31_19145 PF01203 Type II secretion system (T2SS), protein N NUT31_19150 PF00196 Bacterial regulatory proteins, luxR family NUT31_19155 PF00579 tRNA synthetases class I (W and Y) NUT31_19155 PF01479 S4 domain NUT31_19160 PF13419 Haloacid dehalogenase-like hydrolase NUT31_19165 PF00293 NUDIX domain NUT31_19170 PF00459 Inositol monophosphatase family NUT31_19175 PF03222 Tryptophan/tyrosine permease family NUT31_19180 PF01588 Putative tRNA binding domain NUT31_19185 PF06445 GyrI-like small molecule binding domain NUT31_19185 PF12833 Helix-turn-helix domain NUT31_19190 PF01340 Met Apo-repressor, MetJ NUT31_19195 PF01053 Cys/Met metabolism PLP-dependent enzyme NUT31_19200 PF00696 Amino acid kinase family NUT31_19200 PF00742 Homoserine dehydrogenase NUT31_19200 PF03447 Homoserine dehydrogenase, NAD binding domain NUT31_19205 PF00311 Phosphoenolpyruvate carboxylase NUT31_19210 PF07687 Peptidase dimerisation domain NUT31_19210 PF01546 Peptidase family M20/M25/M40 NUT31_19215 PF02774 Semialdehyde dehydrogenase, dimerisation domain NUT31_19215 PF01118 Semialdehyde dehydrogenase, NAD binding domain NUT31_19220 PF00696 Amino acid kinase family NUT31_19225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NUT31_19225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NUT31_19230 PF00764 Arginosuccinate synthase NUT31_19235 PF14698 Argininosuccinate lyase C-terminal NUT31_19235 PF00206 Lyase NUT31_19240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_19240 PF03466 LysR substrate binding domain NUT31_19250 PF14552 Tautomerase enzyme NUT31_19280 PF12464 Maltose acetyltransferase NUT31_19280 PF14602 Hexapeptide repeat of succinyl-transferase NUT31_19285 PF13194 Domain of unknown function (DUF4010) NUT31_19300 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_19305 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_19310 PF00005 ABC transporter NUT31_19310 PF12857 TOBE-like domain NUT31_19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_19315 PF03466 LysR substrate binding domain NUT31_19320 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NUT31_19320 PF18416 N-acetylglucosamine binding protein domain 2 NUT31_19325 PF08269 Cache domain NUT31_19325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_19355 PF03572 Peptidase family S41 NUT31_19355 PF14684 Tricorn protease C1 domain NUT31_19355 PF14685 Tricorn protease PDZ domain NUT31_19355 PF07676 WD40-like Beta Propeller Repeat NUT31_19375 PF11230 Protein of unknown function (DUF3029) NUT31_19380 PF04055 Radical SAM superfamily NUT31_19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_19390 PF03466 LysR substrate binding domain NUT31_19395 PF00155 Aminotransferase class I and II NUT31_19400 PF02583 Metal-sensitive transcriptional repressor NUT31_19415 PF17967 Pullulanase N2 domain NUT31_19415 PF18494 Pullulanase Ins domain NUT31_19415 PF03714 Bacterial pullanase-associated domain NUT31_19415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUT31_19415 PF11852 Domain of unknown function (DUF3372) NUT31_19420 PF00403 Heavy-metal-associated domain NUT31_19425 PF08534 Redoxin NUT31_19435 PF00270 DEAD/DEAH box helicase NUT31_19435 PF00271 Helicase conserved C-terminal domain NUT31_19450 PF03372 Endonuclease/Exonuclease/phosphatase family NUT31_19455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_19455 PF08447 PAS fold NUT31_19470 PF06062 Uncharacterised protein family (UPF0231) NUT31_19475 PF05651 Putative sugar diacid recognition NUT31_19475 PF17853 GGDEF-like domain NUT31_19475 PF13556 PucR C-terminal helix-turn-helix domain NUT31_19480 PF02447 GntP family permease NUT31_19485 PF02595 Glycerate kinase family NUT31_19495 PF00255 Glutathione peroxidase NUT31_19500 PF03466 LysR substrate binding domain NUT31_19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_19505 PF07670 Nucleoside recognition NUT31_19505 PF07662 Na+ dependent nucleoside transporter C-terminus NUT31_19505 PF01773 Na+ dependent nucleoside transporter N-terminus NUT31_19510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NUT31_19510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NUT31_19515 PF00472 RF-1 domain NUT31_19520 PF00543 Nitrogen regulatory protein P-II NUT31_19525 PF13416 Bacterial extracellular solute-binding protein NUT31_19535 PF00005 ABC transporter NUT31_19535 PF08402 TOBE domain NUT31_19540 PF04261 Dyp-type peroxidase family NUT31_19545 PF01316 Arginine repressor, DNA binding domain NUT31_19545 PF02863 Arginine repressor, C-terminal domain NUT31_19550 PF00005 ABC transporter NUT31_19555 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_19560 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_19565 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_19570 PF00056 lactate/malate dehydrogenase, NAD binding domain NUT31_19570 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NUT31_19575 PF08238 Sel1 repeat NUT31_19580 PF00970 Oxidoreductase FAD-binding domain NUT31_19580 PF00042 Globin NUT31_19580 PF00175 Oxidoreductase NAD-binding domain NUT31_19585 PF02082 Transcriptional regulator NUT31_19590 PF00571 CBS domain NUT31_19590 PF03471 Transporter associated domain NUT31_19590 PF01595 Cyclin M transmembrane N-terminal domain NUT31_19595 PF01578 Cytochrome C assembly protein NUT31_19600 PF00448 SRP54-type protein, GTPase domain NUT31_19600 PF02881 SRP54-type protein, helical bundle domain NUT31_19600 PF02978 Signal peptide binding domain NUT31_19605 PF00886 Ribosomal protein S16 NUT31_19610 PF01782 RimM N-terminal domain NUT31_19610 PF05239 PRC-barrel domain NUT31_19615 PF01746 tRNA (Guanine-1)-methyltransferase NUT31_19620 PF01245 Ribosomal protein L19 NUT31_19630 PF02976 DNA mismatch repair enzyme MutH NUT31_19635 PF00293 NUDIX domain NUT31_19640 PF02896 PEP-utilising enzyme, TIM barrel domain NUT31_19640 PF01590 GAF domain NUT31_19640 PF00391 PEP-utilising enzyme, mobile domain NUT31_19640 PF05524 PEP-utilising enzyme, N-terminal NUT31_19645 PF01790 Prolipoprotein diacylglyceryl transferase NUT31_19650 PF00303 Thymidylate synthase NUT31_19655 PF06965 Na+/H+ antiporter 1 NUT31_19665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_19665 PF03466 LysR substrate binding domain NUT31_19670 PF01022 Bacterial regulatory protein, arsR family NUT31_19675 PF01649 Ribosomal protein S20 NUT31_19680 PF03023 Lipid II flippase MurJ NUT31_19690 PF06574 FAD synthetase NUT31_19690 PF01687 Riboflavin kinase NUT31_19695 PF08264 Anticodon-binding domain of tRNA NUT31_19695 PF00133 tRNA synthetases class I (I, L, M and V) NUT31_19695 PF06827 Zinc finger found in FPG and IleRS NUT31_19700 PF01252 Signal peptidase (SPase) II NUT31_19705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUT31_19710 PF02401 LytB protein NUT31_19715 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NUT31_19715 PF07963 Prokaryotic N-terminal methylation motif NUT31_19750 PF00795 Carbon-nitrogen hydrolase NUT31_19750 PF02540 NAD synthase NUT31_19755 PF00543 Nitrogen regulatory protein P-II NUT31_19765 PF02664 S-Ribosylhomocysteinase (LuxS) NUT31_19770 PF00990 Diguanylate cyclase, GGDEF domain NUT31_19775 PF00773 RNB domain NUT31_19775 PF08461 Ribonuclease R winged-helix domain NUT31_19775 PF00575 S1 RNA binding domain NUT31_19775 PF08206 Ribonuclease B OB domain NUT31_19775 PF17876 Cold shock domain NUT31_19790 PF00588 SpoU rRNA Methylase family NUT31_19790 PF08032 RNA 2'-O ribose methyltransferase substrate binding NUT31_19800 PF13673 Acetyltransferase (GNAT) domain NUT31_19820 PF01566 Natural resistance-associated macrophage protein NUT31_19825 PF01250 Ribosomal protein S6 NUT31_19830 PF01084 Ribosomal protein S18 NUT31_19835 PF03948 Ribosomal protein L9, C-terminal domain NUT31_19835 PF01281 Ribosomal protein L9, N-terminal domain NUT31_19840 PF00175 Oxidoreductase NAD-binding domain NUT31_19840 PF00970 Oxidoreductase FAD-binding domain NUT31_19860 PF00109 Beta-ketoacyl synthase, N-terminal domain NUT31_19860 PF00550 Phosphopantetheine attachment site NUT31_19860 PF08990 Erythronolide synthase docking NUT31_19860 PF16197 Ketoacyl-synthetase C-terminal extension NUT31_19860 PF08240 Alcohol dehydrogenase GroES-like domain NUT31_19860 PF14765 Polyketide synthase dehydratase NUT31_19860 PF00698 Acyl transferase domain NUT31_19860 PF08659 KR domain NUT31_19860 PF02801 Beta-ketoacyl synthase, C-terminal domain NUT31_19865 PF09335 SNARE associated Golgi protein NUT31_19870 PF00675 Insulinase (Peptidase family M16) NUT31_19870 PF05193 Peptidase M16 inactive domain NUT31_19875 PF04262 Glutamate-cysteine ligase NUT31_19885 PF00501 AMP-binding enzyme NUT31_19895 PF00583 Acetyltransferase (GNAT) family NUT31_19905 PF07728 AAA domain (dynein-related subfamily) NUT31_19905 PF17868 AAA lid domain NUT31_19905 PF12592 Protein of unknown function (DUF3763) NUT31_19910 PF05762 VWA domain containing CoxE-like protein NUT31_19915 PF00990 Diguanylate cyclase, GGDEF domain NUT31_19915 PF03707 Bacterial signalling protein N terminal repeat NUT31_19915 PF13188 PAS domain NUT31_19915 PF00563 EAL domain NUT31_19920 PF00072 Response regulator receiver domain NUT31_19920 PF00990 Diguanylate cyclase, GGDEF domain NUT31_19925 PF00009 Elongation factor Tu GTP binding domain NUT31_19925 PF03144 Elongation factor Tu domain 2 NUT31_19925 PF16658 Class II release factor RF3, C-terminal domain NUT31_19945 PF00583 Acetyltransferase (GNAT) family NUT31_19950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NUT31_19960 PF04480 Protein of unknown function (DUF559) NUT31_19965 PF03466 LysR substrate binding domain NUT31_19965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_19970 PF04371 Porphyromonas-type peptidyl-arginine deiminase NUT31_19975 PF01425 Amidase NUT31_19990 PF00753 Metallo-beta-lactamase superfamily NUT31_20000 PF00270 DEAD/DEAH box helicase NUT31_20000 PF00271 Helicase conserved C-terminal domain NUT31_20005 PF00990 Diguanylate cyclase, GGDEF domain NUT31_20010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_20010 PF03466 LysR substrate binding domain NUT31_20030 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase NUT31_20045 PF00445 Ribonuclease T2 family NUT31_20055 PF03060 Nitronate monooxygenase NUT31_20085 PF09297 NADH pyrophosphatase zinc ribbon domain NUT31_20085 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NUT31_20085 PF00293 NUDIX domain NUT31_20090 PF00512 His Kinase A (phospho-acceptor) domain NUT31_20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_20090 PF00672 HAMP domain NUT31_20090 PF16527 Two-component sensor protein CpxA, periplasmic domain NUT31_20095 PF00486 Transcriptional regulatory protein, C terminal NUT31_20095 PF00072 Response regulator receiver domain NUT31_20100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUT31_20105 PF00005 ABC transporter NUT31_20105 PF02687 FtsX-like permease family NUT31_20105 PF12704 MacB-like periplasmic core domain NUT31_20110 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_20115 PF00005 ABC transporter NUT31_20120 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_20125 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_20130 PF00291 Pyridoxal-phosphate dependent enzyme NUT31_20135 PF00326 Prolyl oligopeptidase family NUT31_20135 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NUT31_20155 PF08335 GlnD PII-uridylyltransferase NUT31_20155 PF03710 Glutamate-ammonia ligase adenylyltransferase NUT31_20165 PF00672 HAMP domain NUT31_20165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_20165 PF02743 Cache domain NUT31_20170 PF00027 Cyclic nucleotide-binding domain NUT31_20170 PF00520 Ion transport protein NUT31_20175 PF08239 Bacterial SH3 domain NUT31_20180 PF00171 Aldehyde dehydrogenase family NUT31_20180 PF01619 Proline dehydrogenase NUT31_20180 PF14850 DNA-binding domain of Proline dehydrogenase NUT31_20180 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NUT31_20185 PF09297 NADH pyrophosphatase zinc ribbon domain NUT31_20185 PF00293 NUDIX domain NUT31_20190 PF01208 Uroporphyrinogen decarboxylase (URO-D) NUT31_20195 PF00480 ROK family NUT31_20200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NUT31_20200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NUT31_20205 PF00162 Phosphoglycerate kinase NUT31_20210 PF01116 Fructose-bisphosphate aldolase class-II NUT31_20215 PF01266 FAD dependent oxidoreductase NUT31_20230 PF11412 Disulphide bond corrector protein DsbC NUT31_20230 PF02683 Cytochrome C biogenesis protein transmembrane region NUT31_20235 PF03091 CutA1 divalent ion tolerance protein NUT31_20250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_20250 PF03466 LysR substrate binding domain NUT31_20255 PF01571 Aminomethyltransferase folate-binding domain NUT31_20260 PF03937 Flavinator of succinate dehydrogenase NUT31_20270 PF00890 FAD binding domain NUT31_20270 PF02910 Fumarate reductase flavoprotein C-term NUT31_20275 PF04542 Sigma-70 region 2 NUT31_20275 PF08281 Sigma-70, region 4 NUT31_20280 PF03873 Anti sigma-E protein RseA, C-terminal domain NUT31_20280 PF03872 Anti sigma-E protein RseA, N-terminal domain NUT31_20285 PF03888 MucB/RseB N-terminal domain NUT31_20285 PF17188 MucB/RseB C-terminal domain NUT31_20295 PF00679 Elongation factor G C-terminus NUT31_20295 PF00009 Elongation factor Tu GTP binding domain NUT31_20295 PF03144 Elongation factor Tu domain 2 NUT31_20295 PF06421 GTP-binding protein LepA C-terminus NUT31_20300 PF10502 Signal peptidase, peptidase S26 NUT31_20305 PF14622 Ribonuclease-III-like NUT31_20305 PF00035 Double-stranded RNA binding motif NUT31_20310 PF01926 50S ribosome-binding GTPase NUT31_20310 PF07650 KH domain NUT31_20315 PF02565 Recombination protein O C terminal NUT31_20315 PF11967 Recombination protein O N terminal NUT31_20320 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NUT31_20330 PF01116 Fructose-bisphosphate aldolase class-II NUT31_20335 PF01979 Amidohydrolase family NUT31_20340 PF03610 PTS system fructose IIA component NUT31_20345 PF03613 PTS system mannose/fructose/sorbose family IID component NUT31_20350 PF03609 PTS system sorbose-specific iic component NUT31_20355 PF03830 PTS system sorbose subfamily IIB component NUT31_20360 PF01380 SIS domain NUT31_20365 PF08013 Tagatose 6 phosphate kinase NUT31_20370 PF08220 DeoR-like helix-turn-helix domain NUT31_20370 PF00455 DeoR C terminal sensor domain NUT31_20375 PF01510 N-acetylmuramoyl-L-alanine amidase NUT31_20380 PF07308 Protein of unknown function (DUF1456) NUT31_20385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_20385 PF01627 Hpt domain NUT31_20385 PF00072 Response regulator receiver domain NUT31_20385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NUT31_20385 PF00672 HAMP domain NUT31_20385 PF00512 His Kinase A (phospho-acceptor) domain NUT31_20390 PF05958 tRNA (Uracil-5-)-methyltransferase NUT31_20390 PF01938 TRAM domain NUT31_20395 PF04607 Region found in RelA / SpoT proteins NUT31_20395 PF02824 TGS domain NUT31_20395 PF13291 ACT domain NUT31_20400 PF03819 MazG nucleotide pyrophosphohydrolase domain NUT31_20405 PF06418 CTP synthase N-terminus NUT31_20405 PF00117 Glutamine amidotransferase class-I NUT31_20410 PF00113 Enolase, C-terminal TIM barrel domain NUT31_20410 PF03952 Enolase, N-terminal domain NUT31_20415 PF04977 Septum formation initiator NUT31_20420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NUT31_20425 PF02542 YgbB family NUT31_20430 PF01142 tRNA pseudouridine synthase D (TruD) NUT31_20435 PF01975 Survival protein SurE NUT31_20445 PF09335 SNARE associated Golgi protein NUT31_20450 PF01476 LysM domain NUT31_20450 PF01551 Peptidase family M23 NUT31_20455 PF04542 Sigma-70 region 2 NUT31_20455 PF04539 Sigma-70 region 3 NUT31_20455 PF04545 Sigma-70, region 4 NUT31_20455 PF00140 Sigma-70 factor, region 1.2 NUT31_20460 PF00814 Glycoprotease family NUT31_20465 PF01165 Ribosomal protein S21 NUT31_20470 PF09424 Yqey-like protein NUT31_20475 PF10410 DnaB-helicase binding domain of primase NUT31_20475 PF08275 DNA primase catalytic core, N-terminal domain NUT31_20475 PF01807 CHC2 zinc finger NUT31_20475 PF08278 DNA primase DnaG DnaB-binding NUT31_20480 PF04546 Sigma-70, non-essential region NUT31_20480 PF00140 Sigma-70 factor, region 1.2 NUT31_20480 PF04542 Sigma-70 region 2 NUT31_20480 PF04539 Sigma-70 region 3 NUT31_20480 PF04545 Sigma-70, region 4 NUT31_20480 PF03979 Sigma-70 factor, region 1.1 NUT31_20490 PF00128 Alpha amylase, catalytic domain NUT31_20505 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NUT31_20505 PF02843 Phosphoribosylglycinamide synthetase, C domain NUT31_20505 PF02844 Phosphoribosylglycinamide synthetase, N domain NUT31_20510 PF01808 AICARFT/IMPCHase bienzyme NUT31_20510 PF02142 MGS-like domain NUT31_20515 PF13411 MerR HTH family regulatory protein NUT31_20520 PF01872 RibD C-terminal domain NUT31_20525 PF03889 Alternative ribosome-rescue factor A NUT31_20530 PF04055 Radical SAM superfamily NUT31_20530 PF06969 HemN C-terminal domain NUT31_20535 PF01725 Ham1 family NUT31_20540 PF07690 Major Facilitator Superfamily NUT31_20545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NUT31_20545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NUT31_20555 PF13302 Acetyltransferase (GNAT) domain NUT31_20560 PF13302 Acetyltransferase (GNAT) domain NUT31_20565 PF07504 Fungalysin/Thermolysin Propeptide Motif NUT31_20565 PF03413 Peptidase propeptide and YPEB domain NUT31_20565 PF01447 Thermolysin metallopeptidase, catalytic domain NUT31_20565 PF02868 Thermolysin metallopeptidase, alpha-helical domain NUT31_20565 PF04151 Bacterial pre-peptidase C-terminal domain NUT31_20570 PF03466 LysR substrate binding domain NUT31_20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_20575 PF07690 Major Facilitator Superfamily NUT31_20580 PF00267 Gram-negative porin NUT31_20585 PF03605 Anaerobic c4-dicarboxylate membrane transporter NUT31_20590 PF10415 Fumarase C C-terminus NUT31_20590 PF00206 Lyase NUT31_20595 PF04186 FxsA cytoplasmic membrane protein NUT31_20600 PF01554 MatE NUT31_20605 PF00166 Chaperonin 10 Kd subunit NUT31_20610 PF00118 TCP-1/cpn60 chaperonin family NUT31_20620 PF03707 Bacterial signalling protein N terminal repeat NUT31_20620 PF13188 PAS domain NUT31_20620 PF00563 EAL domain NUT31_20620 PF00990 Diguanylate cyclase, GGDEF domain NUT31_20630 PF00849 RNA pseudouridylate synthase NUT31_20635 PF00271 Helicase conserved C-terminal domain NUT31_20635 PF12137 RNA polymerase recycling family C-terminal NUT31_20635 PF00176 SNF2 family N-terminal domain NUT31_20635 PF18339 RapA N-terminal Tudor like domain 1 NUT31_20635 PF18337 RapA N-terminal Tudor like domain NUT31_20665 PF02867 Ribonucleotide reductase, barrel domain NUT31_20665 PF00317 Ribonucleotide reductase, all-alpha domain NUT31_20665 PF08343 Ribonucleotide reductase N-terminal NUT31_20675 PF13638 PIN domain NUT31_20675 PF02562 PhoH-like protein NUT31_20685 PF00005 ABC transporter NUT31_20690 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_20710 PF00694 Aconitase C-terminal domain NUT31_20715 PF00330 Aconitase family (aconitate hydratase) NUT31_20720 PF00180 Isocitrate/isopropylmalate dehydrogenase NUT31_20725 PF08502 LeuA allosteric (dimerisation) domain NUT31_20725 PF00682 HMGL-like NUT31_20735 PF01569 PAP2 superfamily NUT31_20740 PF03033 Glycosyltransferase family 28 N-terminal domain NUT31_20740 PF04101 Glycosyltransferase family 28 C-terminal domain NUT31_20750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NUT31_20750 PF00205 Thiamine pyrophosphate enzyme, central domain NUT31_20750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NUT31_20755 PF10369 Small subunit of acetolactate synthase NUT31_20760 PF01515 Phosphate acetyl/butaryl transferase NUT31_20760 PF07085 DRTGG domain NUT31_20765 PF00871 Acetokinase family NUT31_20770 PF04217 Protein of unknown function, DUF412 NUT31_20775 PF03887 YfbU domain NUT31_20780 PF00578 AhpC/TSA family NUT31_20785 PF01842 ACT domain NUT31_20790 PF00701 Dihydrodipicolinate synthetase family NUT31_20795 PF06804 NlpB/DapX lipoprotein NUT31_20800 PF01259 SAICAR synthetase NUT31_20810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_20810 PF03466 LysR substrate binding domain NUT31_20815 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NUT31_20835 PF00072 Response regulator receiver domain NUT31_20835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_20835 PF00512 His Kinase A (phospho-acceptor) domain NUT31_20835 PF18415 Histidine kinase receptor ArcB trans-membrane domain NUT31_20835 PF01627 Hpt domain NUT31_20835 PF00989 PAS fold NUT31_20840 PF01966 HD domain NUT31_20840 PF13286 Phosphohydrolase-associated domain NUT31_20850 PF09456 RcsC Alpha-Beta-Loop (ABL) NUT31_20850 PF00512 His Kinase A (phospho-acceptor) domain NUT31_20850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_20850 PF00072 Response regulator receiver domain NUT31_20855 PF00563 EAL domain NUT31_20855 PF00990 Diguanylate cyclase, GGDEF domain NUT31_20855 PF03707 Bacterial signalling protein N terminal repeat NUT31_20860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_20860 PF00672 HAMP domain NUT31_20860 PF12729 Four helix bundle sensory module for signal transduction NUT31_20870 PF02357 Transcription termination factor nusG NUT31_20875 PF03180 NLPA lipoprotein NUT31_20880 PF00528 Binding-protein-dependent transport system inner membrane component NUT31_20885 PF00005 ABC transporter NUT31_20885 PF09383 NIL domain NUT31_20895 PF00480 ROK family NUT31_20900 PF08331 Domain of unknown function (DUF1730) NUT31_20905 PF01256 Carbohydrate kinase NUT31_20905 PF03853 YjeF-related protein N-terminus NUT31_20910 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NUT31_20915 PF01520 N-acetylmuramoyl-L-alanine amidase NUT31_20920 PF01119 DNA mismatch repair protein, C-terminal domain NUT31_20920 PF08676 MutL C terminal dimerisation domain NUT31_20930 PF17209 Hfq protein NUT31_20935 PF16360 GTP-binding GTPase Middle Region NUT31_20935 PF01926 50S ribosome-binding GTPase NUT31_20935 PF13167 GTP-binding GTPase N-terminal NUT31_20940 PF12221 Bacterial membrane protein N terminal NUT31_20940 PF01145 SPFH domain / Band 7 family NUT31_20945 PF01145 SPFH domain / Band 7 family NUT31_20950 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NUT31_20955 PF00348 Polyprenyl synthetase NUT31_20960 PF00829 Ribosomal prokaryotic L21 protein NUT31_20965 PF01016 Ribosomal L27 protein NUT31_20970 PF01018 GTP1/OBG NUT31_20970 PF01926 50S ribosome-binding GTPase NUT31_20975 PF07670 Nucleoside recognition NUT31_20980 PF00501 AMP-binding enzyme NUT31_20980 PF13193 AMP-binding enzyme C-terminal domain NUT31_21000 PF00296 Luciferase-like monooxygenase NUT31_21010 PF00149 Calcineurin-like phosphoesterase NUT31_21015 PF04379 ApaG domain NUT31_21020 PF00398 Ribosomal RNA adenine dimethylase NUT31_21025 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NUT31_21030 PF00639 PPIC-type PPIASE domain NUT31_21030 PF09312 SurA N-terminal domain NUT31_21035 PF04453 LPS transport system D NUT31_21035 PF03968 OstA-like protein NUT31_21040 PF01636 Phosphotransferase enzyme family NUT31_21045 PF00483 Nucleotidyl transferase NUT31_21050 PF00226 DnaJ domain NUT31_21050 PF05099 Tellurite resistance protein TerB NUT31_21055 PF00860 Permease family NUT31_21065 PF00005 ABC transporter NUT31_21065 PF12848 ABC transporter NUT31_21080 PF01048 Phosphorylase superfamily NUT31_21085 PF01464 Transglycosylase SLT domain NUT31_21100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_21100 PF03466 LysR substrate binding domain NUT31_21105 PF01048 Phosphorylase superfamily NUT31_21110 PF07670 Nucleoside recognition NUT31_21110 PF07662 Na+ dependent nucleoside transporter C-terminus NUT31_21110 PF01773 Na+ dependent nucleoside transporter N-terminus NUT31_21115 PF01791 DeoC/LacD family aldolase NUT31_21125 PF01370 NAD dependent epimerase/dehydratase family NUT31_21135 PF00005 ABC transporter NUT31_21140 PF01032 FecCD transport family NUT31_21150 PF06228 Haem utilisation ChuX/HutX NUT31_21155 PF01243 Pyridoxamine 5'-phosphate oxidase NUT31_21175 PF07715 TonB-dependent Receptor Plug Domain NUT31_21175 PF00593 TonB dependent receptor NUT31_21180 PF12832 MFS_1 like family NUT31_21185 PF13443 Cro/C1-type HTH DNA-binding domain NUT31_21195 PF00512 His Kinase A (phospho-acceptor) domain NUT31_21195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_21195 PF00989 PAS fold NUT31_21200 PF08329 Chitinase A, N-terminal domain NUT31_21200 PF00704 Glycosyl hydrolases family 18 NUT31_21205 PF17945 Beta/Gamma crystallin NUT31_21205 PF12561 ToxR activated gene A lipoprotein domain NUT31_21210 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NUT31_21210 PF18416 N-acetylglucosamine binding protein domain 2 NUT31_21215 PF13847 Methyltransferase domain NUT31_21220 PF13545 Crp-like helix-turn-helix domain NUT31_21220 PF00027 Cyclic nucleotide-binding domain NUT31_21225 PF02566 OsmC-like protein NUT31_21240 PF00485 Phosphoribulokinase / Uridine kinase family NUT31_21245 PF00893 Small Multidrug Resistance protein NUT31_21250 PF00892 EamA-like transporter family NUT31_21255 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NUT31_21260 PF01522 Polysaccharide deacetylase NUT31_21265 PF01370 NAD dependent epimerase/dehydratase family NUT31_21265 PF02911 Formyl transferase, C-terminal domain NUT31_21265 PF00551 Formyl transferase NUT31_21270 PF00535 Glycosyl transferase family 2 NUT31_21275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NUT31_21280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NUT31_21280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NUT31_21280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NUT31_21285 PF06794 Uncharacterised protein family (UPF0270) NUT31_21290 PF00990 Diguanylate cyclase, GGDEF domain NUT31_21290 PF01590 GAF domain NUT31_21290 PF00360 Phytochrome region NUT31_21290 PF00563 EAL domain NUT31_21295 PF00561 alpha/beta hydrolase fold NUT31_21300 PF01584 CheW-like domain NUT31_21300 PF00072 Response regulator receiver domain NUT31_21310 PF09526 Probable metal-binding protein (DUF2387) NUT31_21315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUT31_21320 PF04102 SlyX NUT31_21330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NUT31_21330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUT31_21335 PF00158 Sigma-54 interaction domain NUT31_21335 PF00072 Response regulator receiver domain NUT31_21335 PF02954 Bacterial regulatory protein, Fis family NUT31_21355 PF02872 5'-nucleotidase, C-terminal domain NUT31_21355 PF00149 Calcineurin-like phosphoesterase NUT31_21360 PF00563 EAL domain NUT31_21360 PF12792 CSS motif domain associated with EAL NUT31_21370 PF00772 DnaB-like helicase N terminal domain NUT31_21370 PF03796 DnaB-like helicase C terminal domain NUT31_21375 PF00842 Alanine racemase, C-terminal domain NUT31_21375 PF01168 Alanine racemase, N-terminal domain NUT31_21385 PF12838 4Fe-4S dicluster domain NUT31_21390 PF16325 Peptidase family U32 C-terminal domain NUT31_21390 PF01136 Peptidase family U32 NUT31_21395 PF00989 PAS fold NUT31_21395 PF00990 Diguanylate cyclase, GGDEF domain NUT31_21395 PF01590 GAF domain NUT31_21395 PF00563 EAL domain NUT31_21410 PF16967 E-set like domain NUT31_21410 PF15976 CS1-pili formation C-terminal NUT31_21420 PF00072 Response regulator receiver domain NUT31_21420 PF00196 Bacterial regulatory proteins, luxR family NUT31_21425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_21425 PF00512 His Kinase A (phospho-acceptor) domain NUT31_21425 PF01627 Hpt domain NUT31_21425 PF00072 Response regulator receiver domain NUT31_21425 PF00989 PAS fold NUT31_21425 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUT31_21435 PF06965 Na+/H+ antiporter 1 NUT31_21435 PF13462 Thioredoxin NUT31_21440 PF16363 GDP-mannose 4,6 dehydratase NUT31_21445 PF00970 Oxidoreductase FAD-binding domain NUT31_21445 PF00042 Globin NUT31_21445 PF00175 Oxidoreductase NAD-binding domain NUT31_21450 PF03063 Prismane/CO dehydrogenase family NUT31_21455 PF00210 Ferritin-like domain NUT31_21495 PF00106 short chain dehydrogenase NUT31_21505 PF03441 FAD binding domain of DNA photolyase NUT31_21505 PF00875 DNA photolyase NUT31_21510 PF13411 MerR HTH family regulatory protein NUT31_21515 PF08349 Protein of unknown function (DUF1722) NUT31_21545 PF01817 Chorismate mutase type II NUT31_21545 PF00800 Prephenate dehydratase NUT31_21585 PF00816 H-NS histone family NUT31_21595 PF05930 Prophage CP4-57 regulatory protein (AlpA) NUT31_21645 PF04002 RadC-like JAB domain NUT31_21705 PF00486 Transcriptional regulatory protein, C terminal NUT31_21705 PF00072 Response regulator receiver domain NUT31_21725 PF01389 OmpA-like transmembrane domain NUT31_21725 PF00691 OmpA family NUT31_21745 PF00419 Fimbrial protein NUT31_21750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NUT31_21750 PF02753 Pili assembly chaperone PapD, C-terminal domain NUT31_21755 PF00577 Outer membrane usher protein NUT31_21755 PF13954 PapC N-terminal domain NUT31_21755 PF13953 PapC C-terminal domain NUT31_21760 PF00419 Fimbrial protein NUT31_21780 PF08220 DeoR-like helix-turn-helix domain NUT31_21780 PF00455 DeoR C terminal sensor domain NUT31_21785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NUT31_21785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NUT31_21790 PF07005 Sugar-binding N-terminal domain NUT31_21790 PF17042 Nucleotide-binding C-terminal domain NUT31_21795 PF00596 Class II Aldolase and Adducin N-terminal domain NUT31_21800 PF01261 Xylose isomerase-like TIM barrel NUT31_21805 PF01370 NAD dependent epimerase/dehydratase family NUT31_21810 PF02447 GntP family permease NUT31_21820 PF00672 HAMP domain NUT31_21820 PF02743 Cache domain NUT31_21820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_21825 PF03573 outer membrane porin, OprD family NUT31_21830 PF00106 short chain dehydrogenase NUT31_21855 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NUT31_21865 PF02805 Metal binding domain of Ada NUT31_21865 PF06029 AlkA N-terminal domain NUT31_21865 PF00730 HhH-GPD superfamily base excision DNA repair protein NUT31_21865 PF12833 Helix-turn-helix domain NUT31_21870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NUT31_21870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NUT31_21875 PF01136 Peptidase family U32 NUT31_21875 PF12392 Collagenase NUT31_21880 PF01810 LysE type translocator NUT31_21885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUT31_21885 PF03466 LysR substrate binding domain NUT31_21890 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NUT31_21890 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NUT31_21895 PF02743 Cache domain NUT31_21895 PF00672 HAMP domain NUT31_21895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_21900 PF00072 Response regulator receiver domain NUT31_21910 PF02895 Signal transducing histidine kinase, homodimeric domain NUT31_21910 PF07194 P2 response regulator binding domain NUT31_21910 PF01627 Hpt domain NUT31_21910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUT31_21910 PF01584 CheW-like domain NUT31_21915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_21915 PF12729 Four helix bundle sensory module for signal transduction NUT31_21915 PF00672 HAMP domain NUT31_21920 PF01584 CheW-like domain NUT31_21925 PF00672 HAMP domain NUT31_21925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUT31_21925 PF02203 Tar ligand binding domain homologue NUT31_21930 PF01739 CheR methyltransferase, SAM binding domain NUT31_21930 PF03705 CheR methyltransferase, all-alpha domain NUT31_21935 PF03975 CheD chemotactic sensory transduction NUT31_21940 PF00072 Response regulator receiver domain NUT31_21940 PF01339 CheB methylesterase NUT31_21945 PF00266 Aminotransferase class-V