locus-tag class description C7U63_00080 PF04996 Succinylarginine dihydrolase C7U63_00085 PF01396 Topoisomerase DNA binding C4 zinc finger C7U63_00085 PF01751 Toprim domain C7U63_00085 PF01131 DNA topoisomerase C7U63_00085 PF08272 Topoisomerase I zinc-ribbon-like C7U63_00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_00095 PF08447 PAS fold C7U63_00100 PF02838 Glycosyl hydrolase family 20, domain 2 C7U63_00100 PF00728 Glycosyl hydrolase family 20, catalytic domain C7U63_00115 PF00005 ABC transporter C7U63_00115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7U63_00120 PF00005 ABC transporter C7U63_00120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7U63_00125 PF12911 N-terminal TM domain of oligopeptide transport permease C C7U63_00125 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_00130 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_00135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_00140 PF00512 His Kinase A (phospho-acceptor) domain C7U63_00140 PF09308 LuxQ, periplasmic C7U63_00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_00140 PF00072 Response regulator receiver domain C7U63_00160 PF10725 Protein of unknown function (DUF2517) C7U63_00170 PF05114 Protein of unknown function (DUF692) C7U63_00190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_00190 PF08447 PAS fold C7U63_00190 PF13426 PAS domain C7U63_00205 PF04632 Fusaric acid resistance protein family C7U63_00210 PF03454 MoeA C-terminal region (domain IV) C7U63_00210 PF00994 Probable molybdopterin binding domain C7U63_00210 PF03453 MoeA N-terminal region (domain I and II) C7U63_00215 PF12804 MobA-like NTP transferase domain C7U63_00220 PF00005 ABC transporter C7U63_00225 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_00230 PF12849 PBP superfamily domain C7U63_00235 PF00158 Sigma-54 interaction domain C7U63_00235 PF00072 Response regulator receiver domain C7U63_00235 PF02954 Bacterial regulatory protein, Fis family C7U63_00240 PF00989 PAS fold C7U63_00240 PF00512 His Kinase A (phospho-acceptor) domain C7U63_00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_00250 PF02634 FdhD/NarQ family C7U63_00285 PF12838 4Fe-4S dicluster domain C7U63_00285 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C7U63_00285 PF01568 Molydopterin dinucleotide binding domain C7U63_00285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7U63_00285 PF00384 Molybdopterin oxidoreductase C7U63_00285 PF01568 Molydopterin dinucleotide binding domain C7U63_00285 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C7U63_00285 PF12838 4Fe-4S dicluster domain C7U63_00285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7U63_00285 PF00384 Molybdopterin oxidoreductase C7U63_00290 PF13247 4Fe-4S dicluster domain C7U63_00310 PF03949 Malic enzyme, NAD binding domain C7U63_00310 PF00390 Malic enzyme, N-terminal domain C7U63_00315 PF05433 Glycine zipper 2TM domain C7U63_00315 PF16998 17 kDa outer membrane surface antigen C7U63_00325 PF00860 Permease family C7U63_00330 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_00335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_00335 PF00672 HAMP domain C7U63_00360 PF02685 Glucokinase C7U63_00365 PF01418 Helix-turn-helix domain, rpiR family C7U63_00365 PF01380 SIS domain C7U63_00370 PF00224 Pyruvate kinase, barrel domain C7U63_00370 PF02887 Pyruvate kinase, alpha/beta domain C7U63_00380 PF07969 Amidohydrolase family C7U63_00390 PF02049 Flagellar hook-basal body complex protein FliE C7U63_00395 PF01514 Secretory protein of YscJ/FliF family C7U63_00395 PF08345 Flagellar M-ring protein C-terminal C7U63_00400 PF14842 FliG N-terminal domain C7U63_00400 PF14841 FliG middle domain C7U63_00400 PF01706 FliG C-terminal domain C7U63_00410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7U63_00410 PF18269 T3SS EscN ATPase C-terminal domain C7U63_00430 PF02154 Flagellar motor switch protein FliM C7U63_00430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C7U63_00435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C7U63_00440 PF04347 Flagellar biosynthesis protein, FliO C7U63_00445 PF00813 FliP family C7U63_00450 PF01313 Bacterial export proteins, family 3 C7U63_00455 PF01311 Bacterial export proteins, family 1 C7U63_00460 PF01312 FlhB HrpN YscU SpaS Family C7U63_00465 PF00771 FHIPEP family C7U63_00470 PF00448 SRP54-type protein, GTPase domain C7U63_00475 PF10609 NUBPL iron-transfer P-loop NTPase C7U63_00480 PF04539 Sigma-70 region 3 C7U63_00480 PF04542 Sigma-70 region 2 C7U63_00480 PF04545 Sigma-70, region 4 C7U63_00485 PF00072 Response regulator receiver domain C7U63_00490 PF04344 Chemotaxis phosphatase, CheZ C7U63_00495 PF01584 CheW-like domain C7U63_00495 PF01627 Hpt domain C7U63_00495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_00495 PF07194 P2 response regulator binding domain C7U63_00495 PF02895 Signal transducing histidine kinase, homodimeric domain C7U63_00500 PF01339 CheB methylesterase C7U63_00500 PF00072 Response regulator receiver domain C7U63_00505 PF01618 MotA/TolQ/ExbB proton channel family C7U63_00510 PF00691 OmpA family C7U63_00510 PF13677 Membrane MotB of proton-channel complex MotA/MotB C7U63_00515 PF13614 AAA domain C7U63_00525 PF01584 CheW-like domain C7U63_00535 PF00005 ABC transporter C7U63_00540 PF03379 CcmB protein C7U63_00545 PF01578 Cytochrome C assembly protein C7U63_00550 PF04995 Heme exporter protein D (CcmD) C7U63_00555 PF03100 CcmE C7U63_00560 PF01578 Cytochrome C assembly protein C7U63_00560 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C7U63_00565 PF08534 Redoxin C7U63_00570 PF03918 Cytochrome C biogenesis protein C7U63_00580 PF04333 MlaA lipoprotein C7U63_00585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C7U63_00585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C7U63_00590 PF00462 Glutaredoxin C7U63_00595 PF00291 Pyridoxal-phosphate dependent enzyme C7U63_00600 PF03222 Tryptophan/tyrosine permease family C7U63_00605 PF00871 Acetokinase family C7U63_00610 PF02901 Pyruvate formate lyase-like C7U63_00610 PF01228 Glycine radical C7U63_00615 PF01042 Endoribonuclease L-PSP C7U63_00620 PF01029 NusB family C7U63_00620 PF01189 16S rRNA methyltransferase RsmB/F C7U63_00655 PF01243 Pyridoxamine 5'-phosphate oxidase C7U63_00655 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C7U63_00660 PF13417 Glutathione S-transferase, N-terminal domain C7U63_00680 PF08007 Cupin superfamily protein C7U63_00685 PF08328 Adenylosuccinate lyase C-terminal C7U63_00685 PF00206 Lyase C7U63_00690 PF04356 Protein of unknown function (DUF489) C7U63_00700 PF00293 NUDIX domain C7U63_00705 PF00849 RNA pseudouridylate synthase C7U63_00715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7U63_00720 PF07690 Major Facilitator Superfamily C7U63_00725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7U63_00725 PF02378 Phosphotransferase system, EIIC C7U63_00725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7U63_00750 PF04245 37-kD nucleoid-associated bacterial protein C7U63_00765 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C7U63_00765 PF00356 Bacterial regulatory proteins, lacI family C7U63_00770 PF02378 Phosphotransferase system, EIIC C7U63_00770 PF00367 phosphotransferase system, EIIB C7U63_00775 PF00155 Aminotransferase class I and II C7U63_00795 PF03496 ADP-ribosyltransferase exoenzyme C7U63_00800 PF01312 FlhB HrpN YscU SpaS Family C7U63_00805 PF01311 Bacterial export proteins, family 1 C7U63_00810 PF01313 Bacterial export proteins, family 3 C7U63_00815 PF00813 FliP family C7U63_00820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C7U63_00825 PF02120 Flagellar hook-length control protein FliK C7U63_00835 PF18269 T3SS EscN ATPase C-terminal domain C7U63_00835 PF02874 ATP synthase alpha/beta family, beta-barrel domain C7U63_00835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7U63_00840 PF07201 HrpJ-like domain C7U63_00845 PF09059 TyeA C7U63_00855 PF09474 Type III secretion system YscX (type_III_YscX) C7U63_00865 PF00771 FHIPEP family C7U63_00870 PF09621 Type III secretion system regulator (LcrR) C7U63_00875 PF07216 LcrG protein C7U63_00880 PF04792 V antigen (LcrV) protein C7U63_00885 PF07720 Tetratricopeptide repeat C7U63_00890 PF04888 Secretion system effector C (SseC) like family C7U63_00895 PF05844 YopD protein C7U63_00900 PF05932 Tir chaperone protein (CesT) family C7U63_00915 PF12833 Helix-turn-helix domain C7U63_00925 PF05932 Tir chaperone protein (CesT) family C7U63_00935 PF16697 Inner membrane component of T3SS, cytoplasmic domain C7U63_00935 PF16693 Inner membrane component of T3SS, periplasmic domain C7U63_00945 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF C7U63_00950 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) C7U63_00955 PF09025 YopR, type III needle-polymerisation regulator C7U63_00960 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI C7U63_00965 PF01514 Secretory protein of YscJ/FliF family C7U63_00970 PF06578 YOP proteins translocation protein K (YscK) C7U63_00975 PF02108 Flagellar assembly protein FliH C7U63_00980 PF02075 Crossover junction endodeoxyribonuclease RuvC C7U63_00990 PF00873 AcrB/AcrD/AcrF family C7U63_00995 PF09317 Domain of unknown function (DUF1974) C7U63_00995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7U63_00995 PF02770 Acyl-CoA dehydrogenase, middle domain C7U63_00995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7U63_01000 PF00440 Bacterial regulatory proteins, tetR family C7U63_01050 PF00384 Molybdopterin oxidoreductase C7U63_01050 PF12838 4Fe-4S dicluster domain C7U63_01050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7U63_01050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C7U63_01050 PF01568 Molydopterin dinucleotide binding domain C7U63_01055 PF00563 EAL domain C7U63_01055 PF00990 Diguanylate cyclase, GGDEF domain C7U63_01055 PF03707 Bacterial signalling protein N terminal repeat C7U63_01060 PF00512 His Kinase A (phospho-acceptor) domain C7U63_01060 PF09456 RcsC Alpha-Beta-Loop (ABL) C7U63_01060 PF00072 Response regulator receiver domain C7U63_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_01070 PF01668 SmpB protein C7U63_01075 PF03364 Polyketide cyclase / dehydrase and lipid transport C7U63_01080 PF03658 RnfH family Ubiquitin C7U63_01085 PF07687 Peptidase dimerisation domain C7U63_01085 PF01546 Peptidase family M20/M25/M40 C7U63_01090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7U63_01090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7U63_01090 PF02770 Acyl-CoA dehydrogenase, middle domain C7U63_01090 PF09317 Domain of unknown function (DUF1974) C7U63_01095 PF13580 SIS domain C7U63_01100 PF13230 Glutamine amidotransferases class-II C7U63_01110 PF01933 Uncharacterised protein family UPF0052 C7U63_01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_01120 PF00512 His Kinase A (phospho-acceptor) domain C7U63_01120 PF09456 RcsC Alpha-Beta-Loop (ABL) C7U63_01120 PF00072 Response regulator receiver domain C7U63_01130 PF00072 Response regulator receiver domain C7U63_01130 PF00196 Bacterial regulatory proteins, luxR family C7U63_01135 PF07730 Histidine kinase C7U63_01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_01135 PF00672 HAMP domain C7U63_01135 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C7U63_01140 PF06463 Molybdenum Cofactor Synthesis C C7U63_01140 PF04055 Radical SAM superfamily C7U63_01145 PF13187 4Fe-4S dicluster domain C7U63_01145 PF12838 4Fe-4S dicluster domain C7U63_01155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7U63_01155 PF10518 TAT (twin-arginine translocation) pathway signal sequence C7U63_01155 PF00384 Molybdopterin oxidoreductase C7U63_01155 PF01568 Molydopterin dinucleotide binding domain C7U63_01160 PF12838 4Fe-4S dicluster domain C7U63_01160 PF12800 4Fe-4S binding domain C7U63_01165 PF12801 4Fe-4S binding domain C7U63_01165 PF12837 4Fe-4S binding domain C7U63_01170 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C7U63_01175 PF03264 NapC/NirT cytochrome c family, N-terminal region C7U63_01180 PF00994 Probable molybdopterin binding domain C7U63_01185 PF01967 MoaC family C7U63_01190 PF02597 ThiS family C7U63_01195 PF02391 MoaE protein C7U63_01205 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_01210 PF00005 ABC transporter C7U63_01210 PF03459 TOBE domain C7U63_01215 PF00561 alpha/beta hydrolase fold C7U63_01220 PF06406 StbA protein C7U63_01230 PF00899 ThiF family C7U63_01235 PF00994 Probable molybdopterin binding domain C7U63_01235 PF03453 MoeA N-terminal region (domain I and II) C7U63_01235 PF03454 MoeA C-terminal region (domain IV) C7U63_01240 PF01227 GTP cyclohydrolase I C7U63_01245 PF00672 HAMP domain C7U63_01245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_01250 PF00672 HAMP domain C7U63_01250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_01250 PF17200 Single Cache domain 2 C7U63_01255 PF01268 Formate--tetrahydrofolate ligase C7U63_01265 PF03466 LysR substrate binding domain C7U63_01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_01270 PF04264 YceI-like domain C7U63_01280 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C7U63_01280 PF05221 S-adenosyl-L-homocysteine hydrolase C7U63_01295 PF01546 Peptidase family M20/M25/M40 C7U63_01295 PF07687 Peptidase dimerisation domain C7U63_01305 PF17810 Arginine decarboxylase helical bundle domain C7U63_01305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C7U63_01305 PF17944 Arginine decarboxylase C-terminal helical extension C7U63_01320 PF12729 Four helix bundle sensory module for signal transduction C7U63_01320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_01320 PF00672 HAMP domain C7U63_01330 PF01042 Endoribonuclease L-PSP C7U63_01335 PF03313 Serine dehydratase alpha chain C7U63_01340 PF13309 HTH domain C7U63_01340 PF08348 YheO-like PAS domain C7U63_01345 PF00300 Histidine phosphatase superfamily (branch 1) C7U63_01350 PF00672 HAMP domain C7U63_01350 PF12729 Four helix bundle sensory module for signal transduction C7U63_01350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_01355 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C7U63_01355 PF07055 Enoyl reductase FAD binding domain C7U63_01355 PF12241 Trans-2-enoyl-CoA reductase catalytic region C7U63_01360 PF03606 C4-dicarboxylate anaerobic carrier C7U63_01365 PF00155 Aminotransferase class I and II C7U63_01375 PF00230 Major intrinsic protein C7U63_01380 PF01551 Peptidase family M23 C7U63_01380 PF01464 Transglycosylase SLT domain C7U63_01380 PF10145 Phage-related minor tail protein C7U63_01395 PF13396 Phospholipase_D-nuclease N-terminal C7U63_01395 PF13091 PLD-like domain C7U63_01405 PF00551 Formyl transferase C7U63_01405 PF01842 ACT domain C7U63_01410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C7U63_01420 PF00085 Thioredoxin C7U63_01425 PF01648 4'-phosphopantetheinyl transferase superfamily C7U63_01430 PF00877 NlpC/P60 family C7U63_01435 PF05971 RNA methyltransferase C7U63_01445 PF00939 Sodium:sulfate symporter transmembrane region C7U63_01455 PF01476 LysM domain C7U63_01455 PF03734 L,D-transpeptidase catalytic domain C7U63_01455 PF17969 L,D-transpeptidase C-terminal domain C7U63_01470 PF00480 ROK family C7U63_01470 PF01047 MarR family C7U63_01475 PF01979 Amidohydrolase family C7U63_01480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C7U63_01485 PF02378 Phosphotransferase system, EIIC C7U63_01485 PF00367 phosphotransferase system, EIIB C7U63_01485 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C7U63_01490 PF03173 Putative carbohydrate binding domain C7U63_01490 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C7U63_01490 PF00728 Glycosyl hydrolase family 20, catalytic domain C7U63_01490 PF02838 Glycosyl hydrolase family 20, domain 2 C7U63_01495 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C7U63_01495 PF00749 tRNA synthetases class I (E and Q), catalytic domain C7U63_01500 PF01475 Ferric uptake regulator family C7U63_01510 PF00258 Flavodoxin C7U63_01515 PF01402 Ribbon-helix-helix protein, copG family C7U63_01525 PF12697 Alpha/beta hydrolase family C7U63_01530 PF17206 SeqA protein N-terminal domain C7U63_01530 PF03925 SeqA protein C-terminal domain C7U63_01535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C7U63_01535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C7U63_01535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C7U63_01535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C7U63_01545 PF01047 MarR family C7U63_01550 PF13406 Transglycosylase SLT domain C7U63_01555 PF01066 CDP-alcohol phosphatidyltransferase C7U63_01560 PF00005 ABC transporter C7U63_01565 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_01570 PF13416 Bacterial extracellular solute-binding protein C7U63_01575 PF00403 Heavy-metal-associated domain C7U63_01575 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_01575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7U63_01580 PF02627 Carboxymuconolactone decarboxylase family C7U63_01600 PF17243 POTRA domain TamA domain 1 C7U63_01600 PF07244 Surface antigen variable number repeat C7U63_01600 PF01103 Surface antigen C7U63_01605 PF04357 TamB, inner membrane protein subunit of TAM complex C7U63_01625 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C7U63_01630 PF00990 Diguanylate cyclase, GGDEF domain C7U63_01630 PF03707 Bacterial signalling protein N terminal repeat C7U63_01630 PF00563 EAL domain C7U63_01635 PF01464 Transglycosylase SLT domain C7U63_01635 PF14718 Soluble lytic murein transglycosylase L domain C7U63_01645 PF00793 DAHP synthetase I family C7U63_01650 PF07715 TonB-dependent Receptor Plug Domain C7U63_01650 PF00593 TonB dependent receptor C7U63_01655 PF00425 chorismate binding enzyme C7U63_01660 PF00501 AMP-binding enzyme C7U63_01660 PF13193 AMP-binding enzyme C-terminal domain C7U63_01665 PF00857 Isochorismatase family C7U63_01665 PF00550 Phosphopantetheine attachment site C7U63_01675 PF00975 Thioesterase domain C7U63_01675 PF00550 Phosphopantetheine attachment site C7U63_01675 PF00668 Condensation domain C7U63_01675 PF00501 AMP-binding enzyme C7U63_01685 PF00676 Dehydrogenase E1 component C7U63_01690 PF02779 Transketolase, pyrimidine binding domain C7U63_01690 PF02780 Transketolase, C-terminal domain C7U63_01700 PF00313 'Cold-shock' DNA-binding domain C7U63_01725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_01730 PF00455 DeoR C terminal sensor domain C7U63_01730 PF08220 DeoR-like helix-turn-helix domain C7U63_01740 PF04055 Radical SAM superfamily C7U63_01745 PF00923 Transaldolase/Fructose-6-phosphate aldolase C7U63_01755 PF01966 HD domain C7U63_01760 PF00849 RNA pseudouridylate synthase C7U63_01760 PF01479 S4 domain C7U63_01770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_01775 PF12850 Calcineurin-like phosphoesterase superfamily domain C7U63_01790 PF13144 Chaperone for flagella basal body P-ring formation C7U63_01795 PF01584 CheW-like domain C7U63_01795 PF00072 Response regulator receiver domain C7U63_01800 PF03705 CheR methyltransferase, all-alpha domain C7U63_01800 PF01739 CheR methyltransferase, SAM binding domain C7U63_01805 PF00460 Flagella basal body rod protein C7U63_01810 PF00460 Flagella basal body rod protein C7U63_01810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_01815 PF03963 Flagellar hook capping protein - N-terminal region C7U63_01815 PF13860 FlgD Ig-like domain C7U63_01815 PF13861 FlgD Tudor-like domain C7U63_01820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_01820 PF00460 Flagella basal body rod protein C7U63_01820 PF07559 Flagellar basal body protein FlaE C7U63_01825 PF00460 Flagella basal body rod protein C7U63_01825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_01830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_01830 PF00460 Flagella basal body rod protein C7U63_01835 PF02107 Flagellar L-ring protein C7U63_01840 PF02119 Flagellar P-ring protein C7U63_01845 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C7U63_01845 PF10135 Rod binding protein C7U63_01850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_01850 PF07196 Flagellin hook IN motif C7U63_01855 PF00669 Bacterial flagellin N-terminal helical region C7U63_01860 PF03448 MgtE intracellular N domain C7U63_01860 PF01769 Divalent cation transporter C7U63_01860 PF00571 CBS domain C7U63_01865 PF02541 Ppx/GppA phosphatase family C7U63_01870 PF02503 Polyphosphate kinase middle domain C7U63_01870 PF13089 Polyphosphate kinase N-terminal domain C7U63_01870 PF13090 Polyphosphate kinase C-terminal domain 2 C7U63_01870 PF17941 Polyphosphate kinase C-terminal domain 1 C7U63_01875 PF01842 ACT domain C7U63_01885 PF02954 Bacterial regulatory protein, Fis family C7U63_01885 PF00158 Sigma-54 interaction domain C7U63_01885 PF00072 Response regulator receiver domain C7U63_01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_01890 PF00512 His Kinase A (phospho-acceptor) domain C7U63_01890 PF00989 PAS fold C7U63_01900 PF01784 NIF3 (NGG1p interacting factor 3) C7U63_01905 PF00551 Formyl transferase C7U63_01910 PF00586 AIR synthase related protein, N-terminal domain C7U63_01910 PF02769 AIR synthase related protein, C-terminal domain C7U63_01925 PF00308 Bacterial dnaA protein C7U63_01930 PF00463 Isocitrate lyase family C7U63_01935 PF01274 Malate synthase C7U63_01945 PF14437 MafB19-like deaminase C7U63_01950 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_01955 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_01965 PF01895 PhoU domain C7U63_01975 PF01595 Cyclin M transmembrane N-terminal domain C7U63_01975 PF03471 Transporter associated domain C7U63_01975 PF00571 CBS domain C7U63_01985 PF02574 Homocysteine S-methyltransferase C7U63_01985 PF02965 Vitamin B12 dependent methionine synthase, activation domain C7U63_01985 PF02607 B12 binding domain C7U63_01985 PF02310 B12 binding domain C7U63_01985 PF00809 Pterin binding enzyme C7U63_01990 PF13520 Amino acid permease C7U63_01995 PF04116 Fatty acid hydroxylase superfamily C7U63_02010 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_02015 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_02020 PF00990 Diguanylate cyclase, GGDEF domain C7U63_02025 PF07690 Major Facilitator Superfamily C7U63_02030 PF05231 MASE1 C7U63_02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_02030 PF07730 Histidine kinase C7U63_02035 PF00196 Bacterial regulatory proteins, luxR family C7U63_02035 PF00072 Response regulator receiver domain C7U63_02040 PF01272 Transcription elongation factor, GreA/GreB, C-term C7U63_02040 PF14760 Rnk N-terminus C7U63_02055 PF00245 Alkaline phosphatase C7U63_02060 PF00245 Alkaline phosphatase C7U63_02065 PF01926 50S ribosome-binding GTPase C7U63_02070 PF00850 Histone deacetylase domain C7U63_02080 PF06733 DEAD_2 C7U63_02080 PF13307 Helicase C-terminal domain C7U63_02085 PF13609 Gram-negative porin C7U63_02090 PF01817 Chorismate mutase type II C7U63_02090 PF02153 Prephenate dehydrogenase C7U63_02095 PF00793 DAHP synthetase I family C7U63_02100 PF00483 Nucleotidyl transferase C7U63_02105 PF02355 Protein export membrane protein C7U63_02105 PF07549 SecD/SecF GG Motif C7U63_02110 PF07549 SecD/SecF GG Motif C7U63_02110 PF13721 SecD export protein N-terminal TM region C7U63_02110 PF02355 Protein export membrane protein C7U63_02145 PF01230 HIT domain C7U63_02150 PF00672 HAMP domain C7U63_02150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_02160 PF01979 Amidohydrolase family C7U63_02175 PF00375 Sodium:dicarboxylate symporter family C7U63_02180 PF13426 PAS domain C7U63_02180 PF08447 PAS fold C7U63_02180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_02190 PF05661 Protein of unknown function (DUF808) C7U63_02195 PF01432 Peptidase family M3 C7U63_02195 PF08439 Oligopeptidase F C7U63_02205 PF05728 Uncharacterised protein family (UPF0227) C7U63_02210 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_02220 PF04055 Radical SAM superfamily C7U63_02225 PF00563 EAL domain C7U63_02225 PF00990 Diguanylate cyclase, GGDEF domain C7U63_02225 PF03707 Bacterial signalling protein N terminal repeat C7U63_02230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7U63_02230 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_02240 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C7U63_02240 PF00207 Alpha-2-macroglobulin family C7U63_02240 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C7U63_02240 PF07703 Alpha-2-macroglobulin bait region domain C7U63_02240 PF07678 A-macroglobulin TED domain C7U63_02240 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C7U63_02240 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C7U63_02240 PF01835 MG2 domain C7U63_02240 PF17962 Bacterial macroglobulin domain 6 C7U63_02245 PF00912 Transglycosylase C7U63_02245 PF06832 Penicillin-Binding Protein C-terminus Family C7U63_02245 PF00905 Penicillin binding protein transpeptidase domain C7U63_02260 PF02926 THUMP domain C7U63_02260 PF02568 Thiamine biosynthesis protein (ThiI) C7U63_02270 PF03458 UPF0126 domain C7U63_02275 PF00700 Bacterial flagellin C-terminal helical region C7U63_02275 PF00669 Bacterial flagellin N-terminal helical region C7U63_02280 PF00700 Bacterial flagellin C-terminal helical region C7U63_02280 PF00669 Bacterial flagellin N-terminal helical region C7U63_02290 PF07196 Flagellin hook IN motif C7U63_02290 PF07195 Flagellar hook-associated protein 2 C-terminus C7U63_02290 PF02465 Flagellar hook-associated protein 2 N-terminus C7U63_02295 PF02561 Flagellar protein FliS C7U63_02310 PF13737 Transposase DDE domain C7U63_02335 PF09940 Domain of unknown function (DUF2172) C7U63_02335 PF16221 winged helix-turn-helix C7U63_02335 PF16254 Domain of unknown function (DUF4910) C7U63_02350 PF08666 SAF domain C7U63_02350 PF03102 NeuB family C7U63_02360 PF02348 Cytidylyltransferase C7U63_02380 PF13193 AMP-binding enzyme C-terminal domain C7U63_02380 PF00501 AMP-binding enzyme C7U63_02395 PF00535 Glycosyl transferase family 2 C7U63_02400 PF03275 UDP-galactopyranose mutase C7U63_02425 PF02543 Carbamoyltransferase N-terminus C7U63_02425 PF16861 Carbamoyltransferase C-terminus C7U63_02430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C7U63_02435 PF02719 Polysaccharide biosynthesis protein C7U63_02440 PF01497 Periplasmic binding protein C7U63_02450 PF01048 Phosphorylase superfamily C7U63_02455 PF02535 ZIP Zinc transporter C7U63_02460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_02460 PF00672 HAMP domain C7U63_02465 PF00459 Inositol monophosphatase family C7U63_02475 PF02798 Glutathione S-transferase, N-terminal domain C7U63_02475 PF00043 Glutathione S-transferase, C-terminal domain C7U63_02480 PF07690 Major Facilitator Superfamily C7U63_02485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_02485 PF03466 LysR substrate binding domain C7U63_02490 PF02634 FdhD/NarQ family C7U63_02495 PF00384 Molybdopterin oxidoreductase C7U63_02505 PF05164 Cell division protein ZapA C7U63_02510 PF03695 Uncharacterised protein family (UPF0149) C7U63_02515 PF01494 FAD binding domain C7U63_02520 PF01494 FAD binding domain C7U63_02530 PF08669 Glycine cleavage T-protein C-terminal barrel domain C7U63_02530 PF01571 Aminomethyltransferase folate-binding domain C7U63_02535 PF01597 Glycine cleavage H-protein C7U63_02540 PF02347 Glycine cleavage system P-protein C7U63_02545 PF05598 Transposase domain (DUF772) C7U63_02545 PF01609 Transposase DDE domain C7U63_02560 PF13358 DDE superfamily endonuclease C7U63_02560 PF13592 Winged helix-turn helix C7U63_02600 PF08447 PAS fold C7U63_02600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_02610 PF00324 Amino acid permease C7U63_02620 PF03618 Kinase/pyrophosphorylase C7U63_02625 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C7U63_02625 PF00391 PEP-utilising enzyme, mobile domain C7U63_02625 PF02896 PEP-utilising enzyme, TIM barrel domain C7U63_02635 PF01483 Proprotein convertase P-domain C7U63_02635 PF00082 Subtilase family C7U63_02640 PF03180 NLPA lipoprotein C7U63_02645 PF11893 Domain of unknown function (DUF3413) C7U63_02645 PF00884 Sulfatase C7U63_02650 PF07208 Protein of unknown function (DUF1414) C7U63_02655 PF04245 37-kD nucleoid-associated bacterial protein C7U63_02660 PF01547 Bacterial extracellular solute-binding protein C7U63_02665 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_02665 PF14785 Maltose transport system permease protein MalF P2 domain C7U63_02670 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_02675 PF08402 TOBE domain C7U63_02675 PF00005 ABC transporter C7U63_02680 PF03976 Polyphosphate kinase 2 (PPK2) C7U63_02685 PF00561 alpha/beta hydrolase fold C7U63_02695 PF01594 AI-2E family transporter C7U63_02705 PF01435 Peptidase family M48 C7U63_02705 PF07720 Tetratricopeptide repeat C7U63_02710 PF00578 AhpC/TSA family C7U63_02715 PF03960 ArsC family C7U63_02725 PF04336 Acyl carrier protein phosphodiesterase C7U63_02730 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_02735 PF01979 Amidohydrolase family C7U63_02765 PF00588 SpoU rRNA Methylase family C7U63_02770 PF02082 Transcriptional regulator C7U63_02775 PF00266 Aminotransferase class-V C7U63_02780 PF01592 NifU-like N terminal domain C7U63_02785 PF01521 Iron-sulphur cluster biosynthesis C7U63_02790 PF00226 DnaJ domain C7U63_02790 PF07743 HSCB C-terminal oligomerisation domain C7U63_02795 PF00012 Hsp70 protein C7U63_02800 PF00111 2Fe-2S iron-sulfur cluster binding domain C7U63_02805 PF12404 Peptidase C7U63_02805 PF00883 Cytosol aminopeptidase family, catalytic domain C7U63_02810 PF00883 Cytosol aminopeptidase family, catalytic domain C7U63_02810 PF12404 Peptidase C7U63_02815 PF00334 Nucleoside diphosphate kinase C7U63_02820 PF04055 Radical SAM superfamily C7U63_02830 PF13464 Domain of unknown function (DUF4115) C7U63_02840 PF13393 Histidyl-tRNA synthetase C7U63_02840 PF03129 Anticodon binding domain C7U63_02845 PF09976 Tetratricopeptide repeat-like domain C7U63_02850 PF13360 PQQ-like domain C7U63_02855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C7U63_02855 PF01926 50S ribosome-binding GTPase C7U63_02860 PF07191 zinc-ribbons C7U63_02870 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_02870 PF01464 Transglycosylase SLT domain C7U63_02875 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C7U63_02875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C7U63_02875 PF02769 AIR synthase related protein, C-terminal domain C7U63_02880 PF03553 Na+/H+ antiporter family C7U63_02880 PF13726 Na+-H+ antiporter family C7U63_02885 PF00929 Exonuclease C7U63_02890 PF01569 PAP2 superfamily C7U63_02895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7U63_02895 PF11890 Domain of unknown function (DUF3410) C7U63_02895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7U63_02905 PF02774 Semialdehyde dehydrogenase, dimerisation domain C7U63_02905 PF01118 Semialdehyde dehydrogenase, NAD binding domain C7U63_02915 PF01416 tRNA pseudouridine synthase C7U63_02920 PF17848 Acetyl-coA carboxylase zinc finger domain C7U63_02920 PF01039 Carboxyl transferase domain C7U63_02925 PF02875 Mur ligase family, glutamate ligase domain C7U63_02925 PF08245 Mur ligase middle domain C7U63_02930 PF05036 Sporulation related domain C7U63_02935 PF01906 Putative heavy-metal-binding C7U63_02945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7U63_02945 PF10414 Sirohaem synthase dimerisation region C7U63_02945 PF14824 Sirohaem biosynthesis protein central C7U63_02950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7U63_02950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C7U63_02950 PF13187 4Fe-4S dicluster domain C7U63_02955 PF00175 Oxidoreductase NAD-binding domain C7U63_02955 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C7U63_02960 PF17179 4Fe-4S dicluster domain C7U63_02965 PF01734 Patatin-like phospholipase C7U63_02970 PF17676 LD-carboxypeptidase C-terminal domain C7U63_02970 PF02016 LD-carboxypeptidase N-terminal domain C7U63_02975 PF00884 Sulfatase C7U63_02985 PF01842 ACT domain C7U63_02985 PF00696 Amino acid kinase family C7U63_02990 PF00583 Acetyltransferase (GNAT) family C7U63_02990 PF00696 Amino acid kinase family C7U63_02995 PF01625 Peptide methionine sulfoxide reductase C7U63_03015 PF00561 alpha/beta hydrolase fold C7U63_03040 PF00005 ABC transporter C7U63_03050 PF03600 Citrate transporter C7U63_03055 PF07690 Major Facilitator Superfamily C7U63_03075 PF01593 Flavin containing amine oxidoreductase C7U63_03080 PF03239 Iron permease FTR1 family C7U63_03095 PF03350 Uncharacterized protein family, UPF0114 C7U63_03100 PF00271 Helicase conserved C-terminal domain C7U63_03100 PF00270 DEAD/DEAH box helicase C7U63_03130 PF05598 Transposase domain (DUF772) C7U63_03130 PF01609 Transposase DDE domain C7U63_03160 PF01740 STAS domain C7U63_03160 PF00916 Sulfate permease family C7U63_03170 PF02132 RecR protein C7U63_03170 PF13662 Toprim domain C7U63_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_03175 PF00183 Hsp90 protein C7U63_03180 PF00005 ABC transporter C7U63_03185 PF00005 ABC transporter C7U63_03185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7U63_03190 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_03190 PF12911 N-terminal TM domain of oligopeptide transport permease C C7U63_03195 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_03200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_03210 PF04012 PspA/IM30 family C7U63_03215 PF06667 Phage shock protein B C7U63_03225 PF04317 YcjX-like family, DUF463 C7U63_03230 PF05128 Domain of unknown function (DUF697) C7U63_03235 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C7U63_03240 PF01329 Pterin 4 alpha carbinolamine dehydratase C7U63_03250 PF00158 Sigma-54 interaction domain C7U63_03250 PF18024 Helix-turn-helix domain C7U63_03260 PF00990 Diguanylate cyclase, GGDEF domain C7U63_03260 PF17152 Periplasmic sensor domain C7U63_03265 PF00691 OmpA family C7U63_03275 PF03741 Integral membrane protein TerC family C7U63_03285 PF08891 YfcL protein C7U63_03290 PF00501 AMP-binding enzyme C7U63_03295 PF01053 Cys/Met metabolism PLP-dependent enzyme C7U63_03305 PF13460 NAD(P)H-binding C7U63_03310 PF03466 LysR substrate binding domain C7U63_03310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_03315 PF03466 LysR substrate binding domain C7U63_03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_03325 PF02678 Pirin C7U63_03325 PF05726 Pirin C-terminal cupin domain C7U63_03330 PF00857 Isochorismatase family C7U63_03335 PF03466 LysR substrate binding domain C7U63_03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_03340 PF03466 LysR substrate binding domain C7U63_03345 PF08267 Cobalamin-independent synthase, N-terminal domain C7U63_03345 PF01717 Cobalamin-independent synthase, Catalytic domain C7U63_03350 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_03355 PF03466 LysR substrate binding domain C7U63_03355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_03360 PF00232 Glycosyl hydrolase family 1 C7U63_03365 PF18381 YcaO cyclodehydratase C-terminal domain C7U63_03365 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C7U63_03370 PF01226 Formate/nitrite transporter C7U63_03375 PF01228 Glycine radical C7U63_03375 PF02901 Pyruvate formate lyase-like C7U63_03385 PF03692 Putative zinc- or iron-chelating domain C7U63_03400 PF00343 Carbohydrate phosphorylase C7U63_03405 PF00939 Sodium:sulfate symporter transmembrane region C7U63_03410 PF00085 Thioredoxin C7U63_03425 PF00664 ABC transporter transmembrane region C7U63_03425 PF00005 ABC transporter C7U63_03450 PF08543 Phosphomethylpyrimidine kinase C7U63_03455 PF00465 Iron-containing alcohol dehydrogenase C7U63_03460 PF13673 Acetyltransferase (GNAT) domain C7U63_03475 PF13673 Acetyltransferase (GNAT) domain C7U63_03485 PF00285 Citrate synthase, C-terminal domain C7U63_03490 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C7U63_03495 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C7U63_03500 PF00890 FAD binding domain C7U63_03500 PF02910 Fumarate reductase flavoprotein C-term C7U63_03505 PF13085 2Fe-2S iron-sulfur cluster binding domain C7U63_03510 PF16870 2-oxoglutarate dehydrogenase C-terminal C7U63_03510 PF02779 Transketolase, pyrimidine binding domain C7U63_03510 PF16078 2-oxoglutarate dehydrogenase N-terminus C7U63_03510 PF00676 Dehydrogenase E1 component C7U63_03515 PF02817 e3 binding domain C7U63_03515 PF00364 Biotin-requiring enzyme C7U63_03515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7U63_03520 PF08442 ATP-grasp domain C7U63_03520 PF00549 CoA-ligase C7U63_03525 PF00549 CoA-ligase C7U63_03525 PF02629 CoA binding domain C7U63_03540 PF01266 FAD dependent oxidoreductase C7U63_03545 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_03550 PF00005 ABC transporter C7U63_03560 PF07702 UTRA domain C7U63_03560 PF00392 Bacterial regulatory proteins, gntR family C7U63_03565 PF00266 Aminotransferase class-V C7U63_03570 PF00202 Aminotransferase class-III C7U63_03590 PF03918 Cytochrome C biogenesis protein C7U63_03595 PF08534 Redoxin C7U63_03600 PF01578 Cytochrome C assembly protein C7U63_03600 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C7U63_03605 PF03916 Polysulphide reductase, NrfD C7U63_03610 PF13247 4Fe-4S dicluster domain C7U63_03610 PF00037 4Fe-4S binding domain C7U63_03615 PF13435 Cytochrome c554 and c-prime C7U63_03615 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C7U63_03620 PF02335 Cytochrome c552 C7U63_03630 PF13183 4Fe-4S dicluster domain C7U63_03630 PF02754 Cysteine-rich domain C7U63_03635 PF00890 FAD binding domain C7U63_03640 PF04324 BFD-like [2Fe-2S] binding domain C7U63_03640 PF01266 FAD dependent oxidoreductase C7U63_03645 PF02810 SEC-C motif C7U63_03650 PF17200 Single Cache domain 2 C7U63_03650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_03650 PF00672 HAMP domain C7U63_03655 PF00480 ROK family C7U63_03655 PF01047 MarR family C7U63_03665 PF01925 Sulfite exporter TauE/SafE C7U63_03670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_03670 PF03466 LysR substrate binding domain C7U63_03680 PF12833 Helix-turn-helix domain C7U63_03680 PF14525 AraC-binding-like domain C7U63_03685 PF11398 Protein of unknown function (DUF2813) C7U63_03740 PF13419 Haloacid dehalogenase-like hydrolase C7U63_03755 PF01207 Dihydrouridine synthase (Dus) C7U63_03760 PF04304 Protein of unknown function (DUF454) C7U63_03765 PF00156 Phosphoribosyl transferase domain C7U63_03770 PF12170 DNA polymerase III tau subunit V interacting with alpha C7U63_03770 PF12169 DNA polymerase III subunits gamma and tau domain III C7U63_03770 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C7U63_03775 PF02575 YbaB/EbfC DNA-binding family C7U63_03785 PF01261 Xylose isomerase-like TIM barrel C7U63_03790 PF03466 LysR substrate binding domain C7U63_03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_03800 PF03279 Bacterial lipid A biosynthesis acyltransferase C7U63_03805 PF03279 Bacterial lipid A biosynthesis acyltransferase C7U63_03820 PF00990 Diguanylate cyclase, GGDEF domain C7U63_03830 PF00136 DNA polymerase family B C7U63_03830 PF03104 DNA polymerase family B, exonuclease domain C7U63_03845 PF01863 Protein of unknown function DUF45 C7U63_03870 PF01609 Transposase DDE domain C7U63_03870 PF05598 Transposase domain (DUF772) C7U63_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_03875 PF03466 LysR substrate binding domain C7U63_03920 PF13439 Glycosyltransferase Family 4 C7U63_03920 PF00534 Glycosyl transferases group 1 C7U63_03925 PF00862 Sucrose synthase C7U63_03925 PF00534 Glycosyl transferases group 1 C7U63_03930 PF00360 Phytochrome region C7U63_03930 PF00990 Diguanylate cyclase, GGDEF domain C7U63_03930 PF01590 GAF domain C7U63_03930 PF00563 EAL domain C7U63_03935 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C7U63_03935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C7U63_03940 PF13247 4Fe-4S dicluster domain C7U63_03945 PF03916 Polysulphide reductase, NrfD C7U63_03950 PF00374 Nickel-dependent hydrogenase C7U63_03955 PF01750 Hydrogenase maturation protease C7U63_03960 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE C7U63_03965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_03970 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_03975 PF12911 N-terminal TM domain of oligopeptide transport permease C C7U63_03975 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_03980 PF00005 ABC transporter C7U63_03985 PF00005 ABC transporter C7U63_03990 PF02492 CobW/HypB/UreG, nucleotide-binding domain C7U63_03995 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C7U63_04005 PF01924 Hydrogenase formation hypA family C7U63_04010 PF01455 HupF/HypC family C7U63_04020 PF00009 Elongation factor Tu GTP binding domain C7U63_04020 PF09107 Elongation factor SelB, winged helix C7U63_04020 PF09106 Elongation factor SelB, winged helix C7U63_04020 PF09105 Elongation factor SelB, winged helix C7U63_04020 PF03144 Elongation factor Tu domain 2 C7U63_04025 PF12390 Selenocysteine synthase N terminal C7U63_04025 PF03841 L-seryl-tRNA selenium transferase C7U63_04030 PF01750 Hydrogenase maturation protease C7U63_04035 PF07450 Formate hydrogenlyase maturation protein HycH C7U63_04040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C7U63_04045 PF12838 4Fe-4S dicluster domain C7U63_04050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C7U63_04050 PF00374 Nickel-dependent hydrogenase C7U63_04050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C7U63_04055 PF00146 NADH dehydrogenase C7U63_04060 PF00361 Proton-conducting membrane transporter C7U63_04065 PF00037 4Fe-4S binding domain C7U63_04065 PF12798 4Fe-4S binding domain C7U63_04070 PF02705 K+ potassium transporter C7U63_04075 PF17760 UvrA interaction domain C7U63_04075 PF00005 ABC transporter C7U63_04075 PF17755 UvrA DNA-binding domain C7U63_04080 PF00899 ThiF family C7U63_04085 PF00899 ThiF family C7U63_04085 PF14461 Prokaryotic E2 family B C7U63_04100 PF05598 Transposase domain (DUF772) C7U63_04100 PF01609 Transposase DDE domain C7U63_04110 PF13247 4Fe-4S dicluster domain C7U63_04110 PF12800 4Fe-4S binding domain C7U63_04125 PF00158 Sigma-54 interaction domain C7U63_04125 PF02954 Bacterial regulatory protein, Fis family C7U63_04125 PF01590 GAF domain C7U63_04130 PF02634 FdhD/NarQ family C7U63_04135 PF01118 Semialdehyde dehydrogenase, NAD binding domain C7U63_04135 PF02774 Semialdehyde dehydrogenase, dimerisation domain C7U63_04140 PF01266 FAD dependent oxidoreductase C7U63_04145 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C7U63_04155 PF01212 Beta-eliminating lyase C7U63_04160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C7U63_04160 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C7U63_04165 PF04172 LrgB-like family C7U63_04170 PF03788 LrgA family C7U63_04185 PF00929 Exonuclease C7U63_04185 PF08411 Exonuclease C-terminal C7U63_04195 PF01966 HD domain C7U63_04205 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C7U63_04205 PF04408 Helicase associated domain (HA2) C7U63_04205 PF11898 Domain of unknown function (DUF3418) C7U63_04205 PF00270 DEAD/DEAH box helicase C7U63_04205 PF00271 Helicase conserved C-terminal domain C7U63_04215 PF01386 Ribosomal L25p family C7U63_04220 PF00376 MerR family regulatory protein C7U63_04220 PF09278 MerR, DNA binding C7U63_04225 PF00108 Thiolase, N-terminal domain C7U63_04225 PF02803 Thiolase, C-terminal domain C7U63_04230 PF08668 HDOD domain C7U63_04230 PF00563 EAL domain C7U63_04235 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C7U63_04240 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C7U63_04250 PF08281 Sigma-70, region 4 C7U63_04250 PF04542 Sigma-70 region 2 C7U63_04260 PF13519 von Willebrand factor type A domain C7U63_04275 PF01882 Protein of unknown function DUF58 C7U63_04280 PF07726 ATPase family associated with various cellular activities (AAA) C7U63_04280 PF17863 AAA lid domain C7U63_04285 PF00108 Thiolase, N-terminal domain C7U63_04285 PF02803 Thiolase, C-terminal domain C7U63_04290 PF00378 Enoyl-CoA hydratase/isomerase C7U63_04290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7U63_04290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7U63_04295 PF04293 SpoVR like protein C7U63_04300 PF04285 Protein of unknown function (DUF444) C7U63_04305 PF08298 PrkA AAA domain C7U63_04305 PF06798 PrkA serine protein kinase C-terminal domain C7U63_04310 PF00271 Helicase conserved C-terminal domain C7U63_04310 PF09382 RQC domain C7U63_04310 PF16124 RecQ zinc-binding C7U63_04310 PF00270 DEAD/DEAH box helicase C7U63_04310 PF00570 HRDC domain C7U63_04315 PF00375 Sodium:dicarboxylate symporter family C7U63_04330 PF03222 Tryptophan/tyrosine permease family C7U63_04335 PF00293 NUDIX domain C7U63_04340 PF00425 chorismate binding enzyme C7U63_04340 PF04715 Anthranilate synthase component I, N terminal region C7U63_04350 PF08274 PhnA Zinc-Ribbon C7U63_04350 PF03831 PhnA domain C7U63_04370 PF01609 Transposase DDE domain C7U63_04370 PF05598 Transposase domain (DUF772) C7U63_04395 PF08448 PAS fold C7U63_04395 PF00990 Diguanylate cyclase, GGDEF domain C7U63_04400 PF01713 Smr domain C7U63_04405 PF05175 Methyltransferase small domain C7U63_04410 PF01264 Chorismate synthase C7U63_04420 PF00270 DEAD/DEAH box helicase C7U63_04420 PF00271 Helicase conserved C-terminal domain C7U63_04430 PF01124 MAPEG family C7U63_04440 PF03222 Tryptophan/tyrosine permease family C7U63_04445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C7U63_04445 PF00356 Bacterial regulatory proteins, lacI family C7U63_04450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7U63_04450 PF00381 PTS HPr component phosphorylation site C7U63_04455 PF00294 pfkB family carbohydrate kinase C7U63_04460 PF02378 Phosphotransferase system, EIIC C7U63_04460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7U63_04465 PF00575 S1 RNA binding domain C7U63_04465 PF10150 Ribonuclease E/G family C7U63_04465 PF12111 Polyribonucleotide phosphorylase C terminal C7U63_04470 PF01479 S4 domain C7U63_04470 PF00849 RNA pseudouridylate synthase C7U63_04480 PF02545 Maf-like protein C7U63_04485 PF02620 Large ribosomal RNA subunit accumulation protein YceD C7U63_04490 PF01783 Ribosomal L32p protein family C7U63_04495 PF02504 Fatty acid synthesis protein C7U63_04500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C7U63_04500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C7U63_04505 PF00698 Acyl transferase domain C7U63_04515 PF00550 Phosphopantetheine attachment site C7U63_04520 PF02801 Beta-ketoacyl synthase, C-terminal domain C7U63_04520 PF00109 Beta-ketoacyl synthase, N-terminal domain C7U63_04525 PF01063 Amino-transferase class IV C7U63_04530 PF02618 YceG-like family C7U63_04535 PF02223 Thymidylate kinase C7U63_04540 PF09115 DNA polymerase III, delta subunit, C terminal C7U63_04545 PF01026 TatD related DNase C7U63_04550 PF00589 Phage integrase family C7U63_04560 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C7U63_04560 PF01189 16S rRNA methyltransferase RsmB/F C7U63_04560 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C7U63_04565 PF02470 MlaD protein C7U63_04570 PF04403 Paraquat-inducible protein A C7U63_04585 PF00285 Citrate synthase, C-terminal domain C7U63_04590 PF03972 MmgE/PrpD family C7U63_04605 PF06974 Protein of unknown function (DUF1298) C7U63_04605 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C7U63_04630 PF00106 short chain dehydrogenase C7U63_04635 PF01674 Lipase (class 2) C7U63_04640 PF07130 YebG protein C7U63_04715 PF05362 Lon protease (S16) C-terminal proteolytic domain C7U63_04715 PF13654 AAA domain C7U63_04720 PF07977 FabA-like domain C7U63_04725 PF04957 Ribosome modulation factor C7U63_04740 PF10672 S-adenosylmethionine-dependent methyltransferase C7U63_04740 PF01170 Putative RNA methylase family UPF0020 C7U63_04740 PF02926 THUMP domain C7U63_04745 PF00444 Ribosomal protein L36 C7U63_04750 PF01197 Ribosomal protein L31 C7U63_04760 PF07126 Cell-division protein ZapC C7U63_04765 PF01180 Dihydroorotate dehydrogenase C7U63_04780 PF01433 Peptidase family M1 domain C7U63_04780 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C7U63_04780 PF11940 Domain of unknown function (DUF3458) Ig-like fold C7U63_04785 PF03572 Peptidase family S41 C7U63_04785 PF11818 C-terminal domain of tail specific protease (DUF3340) C7U63_04785 PF00595 PDZ domain C7U63_04785 PF17804 Tail specific protease N-terminal domain C7U63_04790 PF17516 ProQ C-terminal domain C7U63_04790 PF04352 ProQ/FINO family C7U63_04795 PF13185 GAF domain C7U63_04805 PF00115 Cytochrome C and Quinol oxidase polypeptide I C7U63_04820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C7U63_04820 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C7U63_04830 PF00403 Heavy-metal-associated domain C7U63_04845 PF13545 Crp-like helix-turn-helix domain C7U63_04845 PF00027 Cyclic nucleotide-binding domain C7U63_04850 PF00582 Universal stress protein family C7U63_04855 PF01171 PP-loop family C7U63_04870 PF08402 TOBE domain C7U63_04870 PF00005 ABC transporter C7U63_04875 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_04880 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_04885 PF13416 Bacterial extracellular solute-binding protein C7U63_04905 PF02798 Glutathione S-transferase, N-terminal domain C7U63_04905 PF00043 Glutathione S-transferase, C-terminal domain C7U63_04910 PF05025 RbsD / FucU transport protein family C7U63_04915 PF00005 ABC transporter C7U63_04920 PF02653 Branched-chain amino acid transport system / permease component C7U63_04925 PF13407 Periplasmic binding protein domain C7U63_04930 PF00294 pfkB family carbohydrate kinase C7U63_04935 PF00356 Bacterial regulatory proteins, lacI family C7U63_04940 PF00990 Diguanylate cyclase, GGDEF domain C7U63_04940 PF17152 Periplasmic sensor domain C7U63_04950 PF02146 Sir2 family C7U63_04970 PF00216 Bacterial DNA-binding protein C7U63_04975 PF03484 tRNA synthetase B5 domain C7U63_04975 PF03483 B3/4 domain C7U63_04975 PF03147 Ferredoxin-fold anticodon binding domain C7U63_04975 PF01588 Putative tRNA binding domain C7U63_04975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C7U63_04980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C7U63_04980 PF01409 tRNA synthetases class II core domain (F) C7U63_04985 PF00453 Ribosomal protein L20 C7U63_04990 PF01632 Ribosomal protein L35 C7U63_04995 PF05198 Translation initiation factor IF-3, N-terminal domain C7U63_04995 PF00707 Translation initiation factor IF-3, C-terminal domain C7U63_05000 PF02824 TGS domain C7U63_05000 PF03129 Anticodon binding domain C7U63_05000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7U63_05000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C7U63_05010 PF04055 Radical SAM superfamily C7U63_05015 PF00128 Alpha amylase, catalytic domain C7U63_05020 PF03989 DNA gyrase C-terminal domain, beta-propeller C7U63_05020 PF00521 DNA gyrase/topoisomerase IV, subunit A C7U63_05030 PF13419 Haloacid dehalogenase-like hydrolase C7U63_05035 PF03477 ATP cone domain C7U63_05035 PF00317 Ribonucleotide reductase, all-alpha domain C7U63_05035 PF02867 Ribonucleotide reductase, barrel domain C7U63_05040 PF00268 Ribonucleotide reductase, small chain C7U63_05045 PF00111 2Fe-2S iron-sulfur cluster binding domain C7U63_05050 PF03562 MltA specific insert domain C7U63_05050 PF06725 3D domain C7U63_05055 PF06945 Protein of unknown function (DUF1289) C7U63_05060 PF01384 Phosphate transporter family C7U63_05065 PF00692 dUTPase C7U63_05070 PF00485 Phosphoribulokinase / Uridine kinase family C7U63_05075 PF10609 NUBPL iron-transfer P-loop NTPase C7U63_05080 PF08264 Anticodon-binding domain of tRNA C7U63_05080 PF01588 Putative tRNA binding domain C7U63_05080 PF09334 tRNA synthetases class I (M) C7U63_05090 PF00708 Acylphosphatase C7U63_05095 PF12729 Four helix bundle sensory module for signal transduction C7U63_05095 PF00672 HAMP domain C7U63_05095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_05100 PF10672 S-adenosylmethionine-dependent methyltransferase C7U63_05100 PF17785 PUA-like domain C7U63_05110 PF02769 AIR synthase related protein, C-terminal domain C7U63_05110 PF00586 AIR synthase related protein, N-terminal domain C7U63_05120 PF00753 Metallo-beta-lactamase superfamily C7U63_05125 PF00570 HRDC domain C7U63_05125 PF01612 3'-5' exonuclease C7U63_05130 PF00501 AMP-binding enzyme C7U63_05130 PF13193 AMP-binding enzyme C-terminal domain C7U63_05135 PF00561 alpha/beta hydrolase fold C7U63_05145 PF00814 Glycoprotease family C7U63_05150 PF04851 Type III restriction enzyme, res subunit C7U63_05150 PF13307 Helicase C-terminal domain C7U63_05160 PF08029 HisG, C-terminal domain C7U63_05160 PF01634 ATP phosphoribosyltransferase C7U63_05165 PF00815 Histidinol dehydrogenase C7U63_05170 PF00155 Aminotransferase class I and II C7U63_05175 PF00475 Imidazoleglycerol-phosphate dehydratase C7U63_05175 PF08645 Polynucleotide kinase 3 phosphatase C7U63_05180 PF00117 Glutamine amidotransferase class-I C7U63_05185 PF00977 Histidine biosynthesis protein C7U63_05190 PF00977 Histidine biosynthesis protein C7U63_05200 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C7U63_05200 PF01502 Phosphoribosyl-AMP cyclohydrolase C7U63_05210 PF00990 Diguanylate cyclase, GGDEF domain C7U63_05210 PF07694 5TMR of 5TMR-LYT C7U63_05215 PF00501 AMP-binding enzyme C7U63_05215 PF13193 AMP-binding enzyme C-terminal domain C7U63_05220 PF03606 C4-dicarboxylate anaerobic carrier C7U63_05230 PF05433 Glycine zipper 2TM domain C7U63_05235 PF00111 2Fe-2S iron-sulfur cluster binding domain C7U63_05235 PF01799 [2Fe-2S] binding domain C7U63_05240 PF00941 FAD binding domain in molybdopterin dehydrogenase C7U63_05240 PF03450 CO dehydrogenase flavoprotein C-terminal domain C7U63_05245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C7U63_05245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C7U63_05250 PF00860 Permease family C7U63_05255 PF01979 Amidohydrolase family C7U63_05260 PF00860 Permease family C7U63_05265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C7U63_05265 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C7U63_05265 PF01799 [2Fe-2S] binding domain C7U63_05270 PF00941 FAD binding domain in molybdopterin dehydrogenase C7U63_05275 PF01979 Amidohydrolase family C7U63_05280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C7U63_05280 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_05285 PF12804 MobA-like NTP transferase domain C7U63_05295 PF13478 XdhC Rossmann domain C7U63_05295 PF02625 XdhC and CoxI family C7U63_05300 PF00892 EamA-like transporter family C7U63_05310 PF01032 FecCD transport family C7U63_05315 PF00005 ABC transporter C7U63_05320 PF07690 Major Facilitator Superfamily C7U63_05325 PF00696 Amino acid kinase family C7U63_05330 PF01979 Amidohydrolase family C7U63_05335 PF01546 Peptidase family M20/M25/M40 C7U63_05335 PF07687 Peptidase dimerisation domain C7U63_05340 PF00291 Pyridoxal-phosphate dependent enzyme C7U63_05345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C7U63_05345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C7U63_05385 PF03330 Lytic transglycolase C7U63_05390 PF04310 MukB N-terminal C7U63_05390 PF16330 MukB hinge domain C7U63_05395 PF04288 MukE-like family C7U63_05400 PF03882 MukF winged-helix domain C7U63_05400 PF17193 MukF C-terminal domain C7U63_05400 PF17192 MukF middle domain C7U63_05410 PF02698 DUF218 domain C7U63_05415 PF00121 Triosephosphate isomerase C7U63_05420 PF00365 Phosphofructokinase C7U63_05425 PF00375 Sodium:dicarboxylate symporter family C7U63_05430 PF06865 Pyrimidine/purine nucleoside phosphorylase C7U63_05435 PF03315 Serine dehydratase beta chain C7U63_05435 PF03313 Serine dehydratase alpha chain C7U63_05445 PF03315 Serine dehydratase beta chain C7U63_05445 PF03313 Serine dehydratase alpha chain C7U63_05450 PF05166 YcgL domain C7U63_05455 PF05209 Septum formation inhibitor MinC, N-terminal domain C7U63_05455 PF03775 Septum formation inhibitor MinC, C-terminal domain C7U63_05460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C7U63_05465 PF03776 Septum formation topological specificity factor MinE C7U63_05470 PF04269 Protein of unknown function, DUF440 C7U63_05475 PF00912 Transglycosylase C7U63_05480 PF04269 Protein of unknown function, DUF440 C7U63_05490 PF13509 S1 domain C7U63_05490 PF17783 CvfB-like winged helix domain C7U63_05515 PF02525 Flavodoxin-like fold C7U63_05520 PF00892 EamA-like transporter family C7U63_05525 PF02222 ATP-grasp domain C7U63_05525 PF01370 NAD dependent epimerase/dehydratase family C7U63_05530 PF13419 Haloacid dehalogenase-like hydrolase C7U63_05540 PF00677 Lumazine binding domain C7U63_05550 PF06786 Uncharacterised protein family (UPF0253) C7U63_05555 PF01554 MatE C7U63_05645 PF05598 Transposase domain (DUF772) C7U63_05645 PF01609 Transposase DDE domain C7U63_05660 PF01609 Transposase DDE domain C7U63_05660 PF05598 Transposase domain (DUF772) C7U63_05730 PF00717 Peptidase S24-like C7U63_05730 PF01381 Helix-turn-helix C7U63_05740 PF07152 YaeQ protein C7U63_05750 PF00392 Bacterial regulatory proteins, gntR family C7U63_05750 PF07840 FadR C-terminal domain C7U63_05755 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C7U63_05760 PF02600 Disulfide bond formation protein DsbB C7U63_05765 PF09335 SNARE associated Golgi protein C7U63_05775 PF00271 Helicase conserved C-terminal domain C7U63_05775 PF04851 Type III restriction enzyme, res subunit C7U63_05775 PF02151 UvrB/uvrC motif C7U63_05775 PF17757 UvrB interaction domain C7U63_05775 PF12344 Ultra-violet resistance protein B C7U63_05790 PF06826 Predicted Permease Membrane Region C7U63_05790 PF02080 TrkA-C domain C7U63_05795 PF02801 Beta-ketoacyl synthase, C-terminal domain C7U63_05795 PF00109 Beta-ketoacyl synthase, N-terminal domain C7U63_05800 PF01266 FAD dependent oxidoreductase C7U63_05800 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C7U63_05815 PF03606 C4-dicarboxylate anaerobic carrier C7U63_05835 PF01925 Sulfite exporter TauE/SafE C7U63_05840 PF13520 Amino acid permease C7U63_05850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C7U63_05850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7U63_05855 PF00378 Enoyl-CoA hydratase/isomerase C7U63_05860 PF00378 Enoyl-CoA hydratase/isomerase C7U63_05865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7U63_05865 PF02770 Acyl-CoA dehydrogenase, middle domain C7U63_05865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7U63_05870 PF02770 Acyl-CoA dehydrogenase, middle domain C7U63_05870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7U63_05870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7U63_05875 PF01039 Carboxyl transferase domain C7U63_05880 PF00378 Enoyl-CoA hydratase/isomerase C7U63_05885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7U63_05885 PF02785 Biotin carboxylase C-terminal domain C7U63_05885 PF00289 Biotin carboxylase, N-terminal domain C7U63_05885 PF00364 Biotin-requiring enzyme C7U63_05890 PF00682 HMGL-like C7U63_05895 PF09278 MerR, DNA binding C7U63_05895 PF00376 MerR family regulatory protein C7U63_05910 PF01184 GPR1/FUN34/yaaH family C7U63_05915 PF06167 Glucose-regulated metallo-peptidase M90 C7U63_05925 PF01235 Sodium:alanine symporter family C7U63_05935 PF05598 Transposase domain (DUF772) C7U63_05935 PF01609 Transposase DDE domain C7U63_05955 PF00378 Enoyl-CoA hydratase/isomerase C7U63_05970 PF04341 Protein of unknown function, DUF485 C7U63_05975 PF00474 Sodium:solute symporter family C7U63_05980 PF00005 ABC transporter C7U63_05980 PF12848 ABC transporter C7U63_05985 PF13145 PPIC-type PPIASE domain C7U63_05990 PF00216 Bacterial DNA-binding protein C7U63_05995 PF00004 ATPase family associated with various cellular activities (AAA) C7U63_05995 PF05362 Lon protease (S16) C-terminal proteolytic domain C7U63_05995 PF02190 ATP-dependent protease La (LON) substrate-binding domain C7U63_06000 PF06689 ClpX C4-type zinc finger C7U63_06000 PF07724 AAA domain (Cdc48 subfamily) C7U63_06000 PF10431 C-terminal, D2-small domain, of ClpB protein C7U63_06005 PF00574 Clp protease C7U63_06010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7U63_06010 PF05698 Bacterial trigger factor protein (TF) C-terminus C7U63_06010 PF05697 Bacterial trigger factor protein (TF) C7U63_06030 PF02687 FtsX-like permease family C7U63_06030 PF12704 MacB-like periplasmic core domain C7U63_06035 PF00005 ABC transporter C7U63_06040 PF02687 FtsX-like permease family C7U63_06040 PF12704 MacB-like periplasmic core domain C7U63_06050 PF17757 UvrB interaction domain C7U63_06050 PF03461 TRCF domain C7U63_06050 PF02559 CarD-like/TRCF domain C7U63_06050 PF00271 Helicase conserved C-terminal domain C7U63_06050 PF00270 DEAD/DEAH box helicase C7U63_06055 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C7U63_06060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_06065 PF00892 EamA-like transporter family C7U63_06075 PF00300 Histidine phosphatase superfamily (branch 1) C7U63_06080 PF05193 Peptidase M16 inactive domain C7U63_06080 PF00675 Insulinase (Peptidase family M16) C7U63_06080 PF16187 Middle or third domain of peptidase_M16 C7U63_06085 PF05724 Thiopurine S-methyltransferase (TPMT) C7U63_06100 PF02805 Metal binding domain of Ada C7U63_06100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C7U63_06100 PF12833 Helix-turn-helix domain C7U63_06100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C7U63_06115 PF00958 GMP synthase C terminal domain C7U63_06115 PF00117 Glutamine amidotransferase class-I C7U63_06115 PF02540 NAD synthase C7U63_06120 PF00571 CBS domain C7U63_06120 PF00478 IMP dehydrogenase / GMP reductase domain C7U63_06125 PF01292 Prokaryotic cytochrome b561 C7U63_06130 PF02601 Exonuclease VII, large subunit C7U63_06130 PF13742 OB-fold nucleic acid binding domain C7U63_06135 PF07478 D-ala D-ala ligase C-terminus C7U63_06135 PF01820 D-ala D-ala ligase N-terminus C7U63_06145 PF00255 Glutathione peroxidase C7U63_06150 PF00270 DEAD/DEAH box helicase C7U63_06150 PF00271 Helicase conserved C-terminal domain C7U63_06155 PF04055 Radical SAM superfamily C7U63_06160 PF00672 HAMP domain C7U63_06160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_06165 PF00793 DAHP synthetase I family C7U63_06170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C7U63_06175 PF00266 Aminotransferase class-V C7U63_06180 PF00766 Electron transfer flavoprotein FAD-binding domain C7U63_06180 PF01012 Electron transfer flavoprotein domain C7U63_06185 PF01012 Electron transfer flavoprotein domain C7U63_06195 PF01544 CorA-like Mg2+ transporter protein C7U63_06200 PF11143 Protein of unknown function (DUF2919) C7U63_06210 PF07273 Protein of unknown function (DUF1439) C7U63_06220 PF00483 Nucleotidyl transferase C7U63_06225 PF00990 Diguanylate cyclase, GGDEF domain C7U63_06225 PF00563 EAL domain C7U63_06225 PF03707 Bacterial signalling protein N terminal repeat C7U63_06240 PF00294 pfkB family carbohydrate kinase C7U63_06250 PF00762 Ferrochelatase C7U63_06255 PF05191 Adenylate kinase, active site lid C7U63_06260 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C7U63_06265 PF00156 Phosphoribosyl transferase domain C7U63_06270 PF02674 Colicin V production protein C7U63_06275 PF02403 Seryl-tRNA synthetase N-terminal domain C7U63_06275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7U63_06280 PF16193 AAA C-terminal domain C7U63_06280 PF12002 MgsA AAA+ ATPase C terminal C7U63_06280 PF00004 ATPase family associated with various cellular activities (AAA) C7U63_06285 PF03548 Outer membrane lipoprotein carrier protein LolA C7U63_06290 PF01580 FtsK/SpoIIIE family C7U63_06290 PF09397 Ftsk gamma domain C7U63_06290 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C7U63_06290 PF17854 FtsK alpha domain C7U63_06295 PF01037 Lrp/AsnC ligand binding domain C7U63_06300 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C7U63_06300 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C7U63_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_06310 PF00990 Diguanylate cyclase, GGDEF domain C7U63_06310 PF17158 Membrane-associated sensor, integral membrane domain C7U63_06315 PF05433 Glycine zipper 2TM domain C7U63_06320 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C7U63_06325 PF04377 Arginine-tRNA-protein transferase, C terminus C7U63_06325 PF04376 Arginine-tRNA-protein transferase, N terminus C7U63_06330 PF01176 Translation initiation factor 1A / IF-1 C7U63_06335 PF00004 ATPase family associated with various cellular activities (AAA) C7U63_06335 PF07724 AAA domain (Cdc48 subfamily) C7U63_06335 PF17871 AAA lid domain C7U63_06335 PF02861 Clp amino terminal domain, pathogenicity island component C7U63_06335 PF10431 C-terminal, D2-small domain, of ClpB protein C7U63_06340 PF02617 ATP-dependent Clp protease adaptor protein ClpS C7U63_06345 PF00313 'Cold-shock' DNA-binding domain C7U63_06350 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C7U63_06350 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C7U63_06370 PF00486 Transcriptional regulatory protein, C terminal C7U63_06370 PF00072 Response regulator receiver domain C7U63_06375 PF00672 HAMP domain C7U63_06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_06375 PF00512 His Kinase A (phospho-acceptor) domain C7U63_06385 PF09924 Uncharacterised conserved protein (DUF2156) C7U63_06385 PF03706 Lysylphosphatidylglycerol synthase TM region C7U63_06395 PF00589 Phage integrase family C7U63_06395 PF13356 Arm DNA-binding domain C7U63_06425 PF13592 Winged helix-turn helix C7U63_06425 PF13358 DDE superfamily endonuclease C7U63_06445 PF13737 Transposase DDE domain C7U63_06475 PF00141 Peroxidase C7U63_06490 PF01965 DJ-1/PfpI family C7U63_06495 PF16123 Hydroxyacylglutathione hydrolase C-terminus C7U63_06495 PF00753 Metallo-beta-lactamase superfamily C7U63_06505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7U63_06510 PF13592 Winged helix-turn helix C7U63_06510 PF13358 DDE superfamily endonuclease C7U63_06530 PF00080 Copper/zinc superoxide dismutase (SODC) C7U63_06540 PF00199 Catalase C7U63_06540 PF06628 Catalase-related immune-responsive C7U63_06550 PF00816 H-NS histone family C7U63_06560 PF13148 Protein of unknown function (DUF3987) C7U63_06565 PF13148 Protein of unknown function (DUF3987) C7U63_06615 PF04002 RadC-like JAB domain C7U63_06670 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A C7U63_06700 PF10722 Putative bacterial sensory transduction regulator C7U63_06710 PF00265 Thymidine kinase C7U63_06715 PF03553 Na+/H+ antiporter family C7U63_06720 PF00816 H-NS histone family C7U63_06725 PF01923 Cobalamin adenosyltransferase C7U63_06730 PF12843 Putative quorum-sensing-regulated virulence factor C7U63_06735 PF04055 Radical SAM superfamily C7U63_06740 PF06508 Queuosine biosynthesis protein QueC C7U63_06755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C7U63_06760 PF18073 Rubredoxin metal binding domain C7U63_06770 PF00216 Bacterial DNA-binding protein C7U63_06775 PF00575 S1 RNA binding domain C7U63_06780 PF02224 Cytidylate kinase C7U63_06785 PF00925 GTP cyclohydrolase II C7U63_06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_06790 PF03466 LysR substrate binding domain C7U63_06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_06795 PF03466 LysR substrate binding domain C7U63_06800 PF07690 Major Facilitator Superfamily C7U63_06820 PF00881 Nitroreductase family C7U63_06825 PF03806 AbgT putative transporter family C7U63_06830 PF13188 PAS domain C7U63_06830 PF00563 EAL domain C7U63_06830 PF03707 Bacterial signalling protein N terminal repeat C7U63_06830 PF00990 Diguanylate cyclase, GGDEF domain C7U63_06835 PF03466 LysR substrate binding domain C7U63_06835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_06840 PF00072 Response regulator receiver domain C7U63_06850 PF01212 Beta-eliminating lyase C7U63_06855 PF00106 short chain dehydrogenase C7U63_06865 PF00248 Aldo/keto reductase family C7U63_06870 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C7U63_06880 PF00005 ABC transporter C7U63_06885 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_06890 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_06895 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_06900 PF03411 Penicillin-insensitive murein endopeptidase C7U63_06910 PF04536 TPM domain C7U63_06935 PF13737 Transposase DDE domain C7U63_06945 PF02146 Sir2 family C7U63_06955 PF01618 MotA/TolQ/ExbB proton channel family C7U63_06960 PF13677 Membrane MotB of proton-channel complex MotA/MotB C7U63_06960 PF00691 OmpA family C7U63_06965 PF00593 TonB dependent receptor C7U63_06965 PF07715 TonB-dependent Receptor Plug Domain C7U63_06970 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C7U63_06970 PF00326 Prolyl oligopeptidase family C7U63_06990 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C7U63_06995 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C7U63_07000 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C7U63_07000 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C7U63_07010 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C7U63_07010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C7U63_07015 PF00384 Molybdopterin oxidoreductase C7U63_07015 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C7U63_07015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7U63_07020 PF00146 NADH dehydrogenase C7U63_07025 PF12838 4Fe-4S dicluster domain C7U63_07030 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C7U63_07035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C7U63_07040 PF00361 Proton-conducting membrane transporter C7U63_07040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C7U63_07045 PF00361 Proton-conducting membrane transporter C7U63_07050 PF00361 Proton-conducting membrane transporter C7U63_07080 PF00270 DEAD/DEAH box helicase C7U63_07080 PF00271 Helicase conserved C-terminal domain C7U63_07080 PF03880 DbpA RNA binding domain C7U63_07085 PF03061 Thioesterase superfamily C7U63_07095 PF01565 FAD binding domain C7U63_07095 PF13183 4Fe-4S dicluster domain C7U63_07095 PF02913 FAD linked oxidases, C-terminal domain C7U63_07105 PF03741 Integral membrane protein TerC family C7U63_07105 PF03471 Transporter associated domain C7U63_07110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7U63_07115 PF08240 Alcohol dehydrogenase GroES-like domain C7U63_07115 PF00107 Zinc-binding dehydrogenase C7U63_07120 PF00962 Adenosine/AMP deaminase C7U63_07125 PF13344 Haloacid dehalogenase-like hydrolase C7U63_07130 PF02254 TrkA-N domain C7U63_07130 PF00999 Sodium/hydrogen exchanger family C7U63_07140 PF13537 Glutamine amidotransferase domain C7U63_07140 PF00733 Asparagine synthase C7U63_07150 PF13737 Transposase DDE domain C7U63_07160 PF14497 Glutathione S-transferase, C-terminal domain C7U63_07160 PF02798 Glutathione S-transferase, N-terminal domain C7U63_07170 PF04209 homogentisate 1,2-dioxygenase C7U63_07175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7U63_07185 PF00849 RNA pseudouridylate synthase C7U63_07190 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_07195 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_07200 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_07205 PF00005 ABC transporter C7U63_07210 PF03956 Lysine exporter LysO C7U63_07220 PF07719 Tetratricopeptide repeat C7U63_07220 PF13181 Tetratricopeptide repeat C7U63_07230 PF07549 SecD/SecF GG Motif C7U63_07230 PF02355 Protein export membrane protein C7U63_07235 PF02355 Protein export membrane protein C7U63_07235 PF13721 SecD export protein N-terminal TM region C7U63_07235 PF07549 SecD/SecF GG Motif C7U63_07240 PF02699 Preprotein translocase subunit C7U63_07245 PF01702 Queuine tRNA-ribosyltransferase C7U63_07250 PF02547 Queuosine biosynthesis protein C7U63_07255 PF00571 CBS domain C7U63_07260 PF10417 C-terminal domain of 1-Cys peroxiredoxin C7U63_07260 PF00578 AhpC/TSA family C7U63_07265 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_07265 PF13192 Thioredoxin domain C7U63_07340 PF00664 ABC transporter transmembrane region C7U63_07340 PF00005 ABC transporter C7U63_07340 PF03412 Peptidase C39 family C7U63_07345 PF16199 Radical_SAM C-terminal domain C7U63_07345 PF04055 Radical SAM superfamily C7U63_07355 PF04898 Glutamate synthase central domain C7U63_07355 PF01645 Conserved region in glutamate synthase C7U63_07355 PF01493 GXGXG motif C7U63_07355 PF00310 Glutamine amidotransferases class-II C7U63_07360 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_07360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C7U63_07370 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_07375 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_07385 PF00271 Helicase conserved C-terminal domain C7U63_07385 PF00270 DEAD/DEAH box helicase C7U63_07400 PF02421 Ferrous iron transport protein B C7U63_07400 PF07670 Nucleoside recognition C7U63_07400 PF07664 Ferrous iron transport protein B C terminus C7U63_07410 PF01253 Translation initiation factor SUI1 C7U63_07415 PF01169 Uncharacterized protein family UPF0016 C7U63_07455 PF01609 Transposase DDE domain C7U63_07455 PF05598 Transposase domain (DUF772) C7U63_07460 PF09190 DALR domain C7U63_07460 PF01406 tRNA synthetases class I (C) catalytic domain C7U63_07465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C7U63_07475 PF00149 Calcineurin-like phosphoesterase C7U63_07510 PF05598 Transposase domain (DUF772) C7U63_07510 PF01609 Transposase DDE domain C7U63_07520 PF05598 Transposase domain (DUF772) C7U63_07520 PF01609 Transposase DDE domain C7U63_07535 PF01609 Transposase DDE domain C7U63_07535 PF05598 Transposase domain (DUF772) C7U63_07595 PF01066 CDP-alcohol phosphatidyltransferase C7U63_07600 PF01541 GIY-YIG catalytic domain C7U63_07600 PF02151 UvrB/uvrC motif C7U63_07600 PF08459 UvrC Helix-hairpin-helix N-terminal C7U63_07605 PF00072 Response regulator receiver domain C7U63_07605 PF00196 Bacterial regulatory proteins, luxR family C7U63_07610 PF02348 Cytidylyltransferase C7U63_07615 PF03966 Trm112p-like protein C7U63_07620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C7U63_07625 PF00005 ABC transporter C7U63_07625 PF00664 ABC transporter transmembrane region C7U63_07630 PF03772 Competence protein C7U63_07630 PF00753 Metallo-beta-lactamase superfamily C7U63_07645 PF00155 Aminotransferase class I and II C7U63_07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_07655 PF03466 LysR substrate binding domain C7U63_07660 PF04219 Protein of unknown function, DUF C7U63_07665 PF03974 Ecotin C7U63_07670 PF03009 Glycerophosphoryl diester phosphodiesterase family C7U63_07675 PF01266 FAD dependent oxidoreductase C7U63_07675 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C7U63_07680 PF00455 DeoR C terminal sensor domain C7U63_07680 PF08220 DeoR-like helix-turn-helix domain C7U63_07685 PF07690 Major Facilitator Superfamily C7U63_07690 PF00230 Major intrinsic protein C7U63_07695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7U63_07695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C7U63_07700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_07700 PF02743 Cache domain C7U63_07700 PF00672 HAMP domain C7U63_07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_07710 PF03466 LysR substrate binding domain C7U63_07725 PF00248 Aldo/keto reductase family C7U63_07735 PF07690 Major Facilitator Superfamily C7U63_07745 PF02322 Cytochrome bd terminal oxidase subunit II C7U63_07750 PF01654 Cytochrome bd terminal oxidase subunit I C7U63_07755 PF00392 Bacterial regulatory proteins, gntR family C7U63_07755 PF00155 Aminotransferase class I and II C7U63_07770 PF03061 Thioesterase superfamily C7U63_07775 PF10689 Protein of unknown function (DUF2496) C7U63_07780 PF03466 LysR substrate binding domain C7U63_07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_07785 PF07690 Major Facilitator Superfamily C7U63_07790 PF01479 S4 domain C7U63_07790 PF00849 RNA pseudouridylate synthase C7U63_07800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7U63_07810 PF00271 Helicase conserved C-terminal domain C7U63_07810 PF04851 Type III restriction enzyme, res subunit C7U63_07815 PF02508 Rnf-Nqr subunit, membrane protein C7U63_07820 PF04060 Putative Fe-S cluster C7U63_07825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C7U63_07825 PF10531 SLBB domain C7U63_07825 PF13375 RnfC Barrel sandwich hybrid domain C7U63_07825 PF12838 4Fe-4S dicluster domain C7U63_07830 PF03116 NQR2, RnfD, RnfE family C7U63_07835 PF04205 FMN-binding domain C7U63_07840 PF02508 Rnf-Nqr subunit, membrane protein C7U63_07845 PF00730 HhH-GPD superfamily base excision DNA repair protein C7U63_07845 PF00633 Helix-hairpin-helix motif C7U63_07845 PF10576 Iron-sulfur binding domain of endonuclease III C7U63_07850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7U63_07855 PF18393 MotY N-terminal domain C7U63_07855 PF00691 OmpA family C7U63_07880 PF05598 Transposase domain (DUF772) C7U63_07880 PF01609 Transposase DDE domain C7U63_07885 PF07759 Protein of unknown function (DUF1615) C7U63_07890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C7U63_07890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7U63_07890 PF02142 MGS-like domain C7U63_07895 PF00117 Glutamine amidotransferase class-I C7U63_07895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C7U63_07900 PF05173 Dihydrodipicolinate reductase, C-terminus C7U63_07900 PF01113 Dihydrodipicolinate reductase, N-terminus C7U63_07915 PF01812 5-formyltetrahydrofolate cyclo-ligase family C7U63_07920 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C7U63_07925 PF01842 ACT domain C7U63_07925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7U63_07925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7U63_07930 PF01219 Prokaryotic diacylglycerol kinase C7U63_07935 PF00793 DAHP synthetase I family C7U63_07940 PF00583 Acetyltransferase (GNAT) family C7U63_07945 PF00005 ABC transporter C7U63_07950 PF01032 FecCD transport family C7U63_07975 PF00842 Alanine racemase, C-terminal domain C7U63_07975 PF01168 Alanine racemase, N-terminal domain C7U63_07980 PF03741 Integral membrane protein TerC family C7U63_07985 PF00005 ABC transporter C7U63_07985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7U63_07990 PF00005 ABC transporter C7U63_07990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7U63_07995 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_07995 PF12911 N-terminal TM domain of oligopeptide transport permease C C7U63_08000 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_08005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_08010 PF01914 MarC family integral membrane protein C7U63_08015 PF00171 Aldehyde dehydrogenase family C7U63_08015 PF00465 Iron-containing alcohol dehydrogenase C7U63_08020 PF01709 Transcriptional regulator C7U63_08025 PF00152 tRNA synthetases class II (D, K and N) C7U63_08025 PF02938 GAD domain C7U63_08025 PF01336 OB-fold nucleic acid binding domain C7U63_08035 PF01904 Protein of unknown function DUF72 C7U63_08040 PF13649 Methyltransferase domain C7U63_08045 PF08003 Protein of unknown function (DUF1698) C7U63_08065 PF00578 AhpC/TSA family C7U63_08065 PF10417 C-terminal domain of 1-Cys peroxiredoxin C7U63_08070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_08070 PF03466 LysR substrate binding domain C7U63_08075 PF00877 NlpC/P60 family C7U63_08085 PF03466 LysR substrate binding domain C7U63_08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_08090 PF02447 GntP family permease C7U63_08095 PF00291 Pyridoxal-phosphate dependent enzyme C7U63_08105 PF00180 Isocitrate/isopropylmalate dehydrogenase C7U63_08110 PF12833 Helix-turn-helix domain C7U63_08115 PF01238 Phosphomannose isomerase type I C7U63_08135 PF05656 Protein of unknown function (DUF805) C7U63_08145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C7U63_08145 PF00034 Cytochrome c C7U63_08155 PF01156 Inosine-uridine preferring nucleoside hydrolase C7U63_08165 PF00171 Aldehyde dehydrogenase family C7U63_08170 PF00440 Bacterial regulatory proteins, tetR family C7U63_08170 PF08359 YsiA-like protein, C-terminal region C7U63_08180 PF00465 Iron-containing alcohol dehydrogenase C7U63_08205 PF01554 MatE C7U63_08215 PF04325 Protein of unknown function (DUF465) C7U63_08225 PF13188 PAS domain C7U63_08225 PF00563 EAL domain C7U63_08225 PF03707 Bacterial signalling protein N terminal repeat C7U63_08225 PF00990 Diguanylate cyclase, GGDEF domain C7U63_08230 PF04337 Protein of unknown function, DUF480 C7U63_08240 PF00127 Copper binding proteins, plastocyanin/azurin family C7U63_08245 PF02424 ApbE family C7U63_08260 PF03372 Endonuclease/Exonuclease/phosphatase family C7U63_08265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_08275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_08275 PF00529 HlyD membrane-fusion protein of T1SS C7U63_08280 PF00873 AcrB/AcrD/AcrF family C7U63_08295 PF00005 ABC transporter C7U63_08300 PF01032 FecCD transport family C7U63_08305 PF01032 FecCD transport family C7U63_08310 PF00593 TonB dependent receptor C7U63_08310 PF07715 TonB-dependent Receptor Plug Domain C7U63_08315 PF04954 Siderophore-interacting protein C7U63_08315 PF08021 Siderophore-interacting FAD-binding domain C7U63_08320 PF11849 Domain of unknown function (DUF3369) C7U63_08330 PF00929 Exonuclease C7U63_08335 PF00075 RNase H C7U63_08340 PF08241 Methyltransferase domain C7U63_08345 PF00753 Metallo-beta-lactamase superfamily C7U63_08345 PF16123 Hydroxyacylglutathione hydrolase C-terminus C7U63_08350 PF01464 Transglycosylase SLT domain C7U63_08350 PF01476 LysM domain C7U63_08355 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C7U63_08365 PF05472 DNA replication terminus site-binding protein (Ter protein) C7U63_08370 PF00176 SNF2 family N-terminal domain C7U63_08370 PF00271 Helicase conserved C-terminal domain C7U63_08370 PF04434 SWIM zinc finger C7U63_08375 PF00512 His Kinase A (phospho-acceptor) domain C7U63_08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_08375 PF00672 HAMP domain C7U63_08380 PF00072 Response regulator receiver domain C7U63_08380 PF00486 Transcriptional regulatory protein, C terminal C7U63_08385 PF00529 HlyD membrane-fusion protein of T1SS C7U63_08385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_08390 PF00873 AcrB/AcrD/AcrF family C7U63_08400 PF00884 Sulfatase C7U63_08400 PF08019 Phosphoethanolamine transferase EptA/EptB C7U63_08405 PF01966 HD domain C7U63_08410 PF06580 Histidine kinase C7U63_08410 PF07694 5TMR of 5TMR-LYT C7U63_08415 PF00072 Response regulator receiver domain C7U63_08415 PF04397 LytTr DNA-binding domain C7U63_08420 PF02554 Carbon starvation protein CstA C7U63_08425 PF11742 Protein of unknown function (DUF3302) C7U63_08430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_08430 PF00529 HlyD membrane-fusion protein of T1SS C7U63_08435 PF00271 Helicase conserved C-terminal domain C7U63_08435 PF04851 Type III restriction enzyme, res subunit C7U63_08440 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C7U63_08445 PF00462 Glutaredoxin C7U63_08450 PF03372 Endonuclease/Exonuclease/phosphatase family C7U63_08460 PF03061 Thioesterase superfamily C7U63_08465 PF01370 NAD dependent epimerase/dehydratase family C7U63_08475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C7U63_08475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C7U63_08475 PF10371 Domain of unknown function C7U63_08475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7U63_08475 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C7U63_08480 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C7U63_08480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C7U63_08480 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_08490 PF03473 MOSC domain C7U63_08490 PF00111 2Fe-2S iron-sulfur cluster binding domain C7U63_08490 PF03473 MOSC domain C7U63_08490 PF03476 MOSC N-terminal beta barrel domain C7U63_08490 PF00111 2Fe-2S iron-sulfur cluster binding domain C7U63_08490 PF03476 MOSC N-terminal beta barrel domain C7U63_08495 PF08447 PAS fold C7U63_08495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_08495 PF13426 PAS domain C7U63_08500 PF01435 Peptidase family M48 C7U63_08510 PF08241 Methyltransferase domain C7U63_08510 PF12697 Alpha/beta hydrolase family C7U63_08515 PF00155 Aminotransferase class I and II C7U63_08520 PF06968 Biotin and Thiamin Synthesis associated domain C7U63_08520 PF04055 Radical SAM superfamily C7U63_08525 PF00202 Aminotransferase class-III C7U63_08540 PF01336 OB-fold nucleic acid binding domain C7U63_08540 PF00152 tRNA synthetases class II (D, K and N) C7U63_08550 PF03605 Anaerobic c4-dicarboxylate membrane transporter C7U63_08560 PF07687 Peptidase dimerisation domain C7U63_08560 PF01546 Peptidase family M20/M25/M40 C7U63_08565 PF03606 C4-dicarboxylate anaerobic carrier C7U63_08575 PF03960 ArsC family C7U63_08580 PF01546 Peptidase family M20/M25/M40 C7U63_08580 PF07687 Peptidase dimerisation domain C7U63_08585 PF02557 D-alanyl-D-alanine carboxypeptidase C7U63_08595 PF03471 Transporter associated domain C7U63_08595 PF00999 Sodium/hydrogen exchanger family C7U63_08595 PF02080 TrkA-C domain C7U63_08610 PF01810 LysE type translocator C7U63_08615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_08615 PF12729 Four helix bundle sensory module for signal transduction C7U63_08615 PF00672 HAMP domain C7U63_08620 PF07509 Protein of unknown function (DUF1523) C7U63_08635 PF01156 Inosine-uridine preferring nucleoside hydrolase C7U63_08640 PF00849 RNA pseudouridylate synthase C7U63_08645 PF01048 Phosphorylase superfamily C7U63_08650 PF00465 Iron-containing alcohol dehydrogenase C7U63_08655 PF04355 SmpA / OmlA family C7U63_08660 PF13460 NAD(P)H-binding C7U63_08670 PF10437 Bacterial lipoate protein ligase C-terminus C7U63_08670 PF03099 Biotin/lipoate A/B protein ligase family C7U63_08675 PF00563 EAL domain C7U63_08675 PF03707 Bacterial signalling protein N terminal repeat C7U63_08675 PF00990 Diguanylate cyclase, GGDEF domain C7U63_08680 PF12704 MacB-like periplasmic core domain C7U63_08680 PF00005 ABC transporter C7U63_08680 PF02687 FtsX-like permease family C7U63_08685 PF00005 ABC transporter C7U63_08685 PF12704 MacB-like periplasmic core domain C7U63_08685 PF02687 FtsX-like permease family C7U63_08690 PF00005 ABC transporter C7U63_08690 PF02687 FtsX-like permease family C7U63_08690 PF12704 MacB-like periplasmic core domain C7U63_08695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_08695 PF00529 HlyD membrane-fusion protein of T1SS C7U63_08700 PF00873 AcrB/AcrD/AcrF family C7U63_08715 PF04143 Sulphur transport C7U63_08730 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_08740 PF02308 MgtC family C7U63_08745 PF00356 Bacterial regulatory proteins, lacI family C7U63_08745 PF13407 Periplasmic binding protein domain C7U63_08750 PF08244 Glycosyl hydrolases family 32 C terminal C7U63_08750 PF00251 Glycosyl hydrolases family 32 N-terminal domain C7U63_08755 PF00367 phosphotransferase system, EIIB C7U63_08755 PF02378 Phosphotransferase system, EIIC C7U63_08760 PF00294 pfkB family carbohydrate kinase C7U63_08765 PF11471 Maltoporin periplasmic N-terminal extension C7U63_08765 PF02264 LamB porin C7U63_08770 PF00684 DnaJ central domain C7U63_08770 PF01556 DnaJ C terminal domain C7U63_08770 PF00226 DnaJ domain C7U63_08775 PF00012 Hsp70 protein C7U63_08780 PF01025 GrpE C7U63_08785 PF01513 ATP-NAD kinase C7U63_08790 PF02463 RecF/RecN/SMC N terminal domain C7U63_08800 PF02833 DHHA2 domain C7U63_08800 PF01368 DHH family C7U63_08805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_08810 PF00005 ABC transporter C7U63_08810 PF02687 FtsX-like permease family C7U63_08810 PF12704 MacB-like periplasmic core domain C7U63_08815 PF02321 Outer membrane efflux protein C7U63_08820 PF00816 H-NS histone family C7U63_08830 PF02397 Bacterial sugar transferase C7U63_08840 PF13439 Glycosyltransferase Family 4 C7U63_08840 PF00534 Glycosyl transferases group 1 C7U63_08845 PF00535 Glycosyl transferase family 2 C7U63_08855 PF02719 Polysaccharide biosynthesis protein C7U63_08860 PF00953 Glycosyl transferase family 4 C7U63_08865 PF01370 NAD dependent epimerase/dehydratase family C7U63_08875 PF01757 Acyltransferase family C7U63_08885 PF00005 ABC transporter C7U63_08890 PF01061 ABC-2 type transporter C7U63_08900 PF00263 Bacterial type II and III secretion system protein C7U63_08900 PF03958 Bacterial type II/III secretion system short domain C7U63_08935 PF07963 Prokaryotic N-terminal methylation motif C7U63_08935 PF08334 Type II secretion system (T2SS), protein G C7U63_08940 PF08334 Type II secretion system (T2SS), protein G C7U63_08940 PF07963 Prokaryotic N-terminal methylation motif C7U63_08945 PF00482 Type II secretion system (T2SS), protein F C7U63_08950 PF00437 Type II/IV secretion system protein C7U63_08955 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C7U63_08960 PF00483 Nucleotidyl transferase C7U63_08965 PF04321 RmlD substrate binding domain C7U63_08970 PF16363 GDP-mannose 4,6 dehydratase C7U63_08975 PF00873 AcrB/AcrD/AcrF family C7U63_08980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_08980 PF00529 HlyD membrane-fusion protein of T1SS C7U63_08985 PF00440 Bacterial regulatory proteins, tetR family C7U63_08985 PF08361 MAATS-type transcriptional repressor, C-terminal region C7U63_09000 PF02001 Protein of unknown function DUF134 C7U63_09015 PF00072 Response regulator receiver domain C7U63_09020 PF00239 Resolvase, N terminal domain C7U63_09020 PF02796 Helix-turn-helix domain of resolvase C7U63_09040 PF18693 TRAM domain C7U63_09040 PF00919 Uncharacterized protein family UPF0004 C7U63_09040 PF04055 Radical SAM superfamily C7U63_09080 PF14821 Threonine synthase N terminus C7U63_09080 PF00291 Pyridoxal-phosphate dependent enzyme C7U63_09085 PF08544 GHMP kinases C terminal C7U63_09085 PF00288 GHMP kinases N terminal domain C7U63_09090 PF01842 ACT domain C7U63_09090 PF00742 Homoserine dehydrogenase C7U63_09090 PF03447 Homoserine dehydrogenase, NAD binding domain C7U63_09090 PF00696 Amino acid kinase family C7U63_09090 PF13840 ACT domain C7U63_09100 PF00588 SpoU rRNA Methylase family C7U63_09105 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C7U63_09120 PF00849 RNA pseudouridylate synthase C7U63_09120 PF01479 S4 domain C7U63_09125 PF04079 Segregation and condensation complex subunit ScpB C7U63_09130 PF02616 Segregation and condensation protein ScpA C7U63_09135 PF01300 Telomere recombination C7U63_09140 PF02811 PHP domain C7U63_09145 PF04715 Anthranilate synthase component I, N terminal region C7U63_09145 PF00425 chorismate binding enzyme C7U63_09150 PF00117 Glutamine amidotransferase class-I C7U63_09150 PF02885 Glycosyl transferase family, helical bundle domain C7U63_09150 PF00591 Glycosyl transferase family, a/b domain C7U63_09160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C7U63_09160 PF00218 Indole-3-glycerol phosphate synthase C7U63_09165 PF00291 Pyridoxal-phosphate dependent enzyme C7U63_09170 PF00290 Tryptophan synthase alpha chain C7U63_09185 PF04307 LexA-binding, inner membrane-associated putative hydrolase C7U63_09205 PF01773 Na+ dependent nucleoside transporter N-terminus C7U63_09205 PF07662 Na+ dependent nucleoside transporter C-terminus C7U63_09205 PF07670 Nucleoside recognition C7U63_09210 PF03960 ArsC family C7U63_09215 PF01758 Sodium Bile acid symporter family C7U63_09220 PF02374 Anion-transporting ATPase C7U63_09225 PF06953 Arsenical resistance operon trans-acting repressor ArsD C7U63_09245 PF03737 Aldolase/RraA C7U63_09255 PF00486 Transcriptional regulatory protein, C terminal C7U63_09255 PF00072 Response regulator receiver domain C7U63_09270 PF00664 ABC transporter transmembrane region C7U63_09270 PF00005 ABC transporter C7U63_09275 PF00005 ABC transporter C7U63_09275 PF00664 ABC transporter transmembrane region C7U63_09295 PF18389 TrmO C-terminal domain C7U63_09295 PF01980 tRNA-methyltransferase O C7U63_09300 PF01292 Prokaryotic cytochrome b561 C7U63_09310 PF00486 Transcriptional regulatory protein, C terminal C7U63_09310 PF00072 Response regulator receiver domain C7U63_09315 PF08918 PhoQ Sensor C7U63_09315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_09330 PF05598 Transposase domain (DUF772) C7U63_09330 PF01609 Transposase DDE domain C7U63_09335 PF05598 Transposase domain (DUF772) C7U63_09335 PF01609 Transposase DDE domain C7U63_09355 PF01266 FAD dependent oxidoreductase C7U63_09360 PF01381 Helix-turn-helix C7U63_09360 PF07883 Cupin domain C7U63_09365 PF00171 Aldehyde dehydrogenase family C7U63_09370 PF00202 Aminotransferase class-III C7U63_09375 PF00324 Amino acid permease C7U63_09385 PF00324 Amino acid permease C7U63_09395 PF02690 Na+/Pi-cotransporter C7U63_09400 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C7U63_09400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7U63_09410 PF04381 Putative exonuclease, RdgC C7U63_09420 PF12320 Type 5 capsule protein repressor C-terminal domain C7U63_09420 PF00149 Calcineurin-like phosphoesterase C7U63_09430 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C7U63_09440 PF02887 Pyruvate kinase, alpha/beta domain C7U63_09440 PF00224 Pyruvate kinase, barrel domain C7U63_09445 PF12795 Mechanosensitive ion channel porin domain C7U63_09445 PF00924 Mechanosensitive ion channel C7U63_09445 PF12794 Mechanosensitive ion channel inner membrane domain 1 C7U63_09450 PF00589 Phage integrase family C7U63_09450 PF13356 Arm DNA-binding domain C7U63_09505 PF05649 Peptidase family M13 C7U63_09505 PF01431 Peptidase family M13 C7U63_09510 PF08448 PAS fold C7U63_09510 PF00990 Diguanylate cyclase, GGDEF domain C7U63_09515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C7U63_09520 PF02896 PEP-utilising enzyme, TIM barrel domain C7U63_09520 PF00391 PEP-utilising enzyme, mobile domain C7U63_09520 PF05524 PEP-utilising enzyme, N-terminal C7U63_09525 PF00381 PTS HPr component phosphorylation site C7U63_09530 PF00291 Pyridoxal-phosphate dependent enzyme C7U63_09535 PF01434 Peptidase family M41 C7U63_09535 PF17862 AAA+ lid domain C7U63_09535 PF00004 ATPase family associated with various cellular activities (AAA) C7U63_09545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C7U63_09545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C7U63_09550 PF01966 HD domain C7U63_09550 PF00672 HAMP domain C7U63_09555 PF13401 AAA domain C7U63_09555 PF01471 Putative peptidoglycan binding domain C7U63_09560 PF16537 Type II secretion system protein B C7U63_09565 PF11356 Type II secretion system protein C C7U63_09570 PF03958 Bacterial type II/III secretion system short domain C7U63_09570 PF00263 Bacterial type II and III secretion system protein C7U63_09575 PF00437 Type II/IV secretion system protein C7U63_09580 PF00482 Type II secretion system (T2SS), protein F C7U63_09585 PF08334 Type II secretion system (T2SS), protein G C7U63_09585 PF07963 Prokaryotic N-terminal methylation motif C7U63_09590 PF07963 Prokaryotic N-terminal methylation motif C7U63_09590 PF12019 Type II transport protein GspH C7U63_09595 PF02501 Type II secretion system (T2SS), protein I C7U63_09595 PF07963 Prokaryotic N-terminal methylation motif C7U63_09600 PF11612 Type II secretion system (T2SS), protein J C7U63_09600 PF07963 Prokaryotic N-terminal methylation motif C7U63_09605 PF03934 Type II secretion system (T2SS), protein K C7U63_09610 PF12693 GspL periplasmic domain C7U63_09610 PF05134 Type II secretion system (T2SS), protein L C7U63_09615 PF04612 Type II secretion system (T2SS), protein M C7U63_09620 PF01203 Type II secretion system (T2SS), protein N C7U63_09630 PF01027 Inhibitor of apoptosis-promoting Bax1 C7U63_09635 PF12805 FUSC-like inner membrane protein yccS C7U63_09640 PF04358 DsrC like protein C7U63_09645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7U63_09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_09650 PF03466 LysR substrate binding domain C7U63_09660 PF04151 Bacterial pre-peptidase C-terminal domain C7U63_09660 PF04389 Peptidase family M28 C7U63_09685 PF11842 Domain of unknown function (DUF3362) C7U63_09685 PF04055 Radical SAM superfamily C7U63_09685 PF08497 Radical SAM N-terminal C7U63_09690 PF00873 AcrB/AcrD/AcrF family C7U63_09695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_09695 PF00529 HlyD membrane-fusion protein of T1SS C7U63_09700 PF00990 Diguanylate cyclase, GGDEF domain C7U63_09700 PF17158 Membrane-associated sensor, integral membrane domain C7U63_09705 PF01734 Patatin-like phospholipase C7U63_09710 PF13520 Amino acid permease C7U63_09725 PF00691 OmpA family C7U63_09725 PF01389 OmpA-like transmembrane domain C7U63_09735 PF00691 OmpA family C7U63_09735 PF01389 OmpA-like transmembrane domain C7U63_09740 PF03949 Malic enzyme, NAD binding domain C7U63_09740 PF00390 Malic enzyme, N-terminal domain C7U63_09745 PF12833 Helix-turn-helix domain C7U63_09750 PF01554 MatE C7U63_09755 PF10692 Protein of unknown function (DUF2498) C7U63_09760 PF00990 Diguanylate cyclase, GGDEF domain C7U63_09765 PF00860 Permease family C7U63_09775 PF01235 Sodium:alanine symporter family C7U63_09780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C7U63_09780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C7U63_09785 PF01699 Sodium/calcium exchanger protein C7U63_09790 PF08534 Redoxin C7U63_09800 PF00293 NUDIX domain C7U63_09815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C7U63_09815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7U63_09820 PF03932 CutC family C7U63_09825 PF00480 ROK family C7U63_09835 PF01435 Peptidase family M48 C7U63_09840 PF12849 PBP superfamily domain C7U63_09845 PF11808 Phosphate regulon sensor protein PhoR C7U63_09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_09845 PF00989 PAS fold C7U63_09845 PF00512 His Kinase A (phospho-acceptor) domain C7U63_09850 PF00072 Response regulator receiver domain C7U63_09850 PF00486 Transcriptional regulatory protein, C terminal C7U63_09855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7U63_09860 PF01590 GAF domain C7U63_09860 PF00158 Sigma-54 interaction domain C7U63_09860 PF02954 Bacterial regulatory protein, Fis family C7U63_09865 PF00171 Aldehyde dehydrogenase family C7U63_09875 PF00892 EamA-like transporter family C7U63_09880 PF00072 Response regulator receiver domain C7U63_09880 PF12431 Transcriptional regulator C7U63_09885 PF17203 Single cache domain 3 C7U63_09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_09885 PF00989 PAS fold C7U63_09885 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C7U63_09890 PF00390 Malic enzyme, N-terminal domain C7U63_09890 PF03949 Malic enzyme, NAD binding domain C7U63_09895 PF03390 2-hydroxycarboxylate transporter family C7U63_09900 PF01047 MarR family C7U63_09905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_09905 PF00529 HlyD membrane-fusion protein of T1SS C7U63_09930 PF01679 Proteolipid membrane potential modulator C7U63_09940 PF13597 Anaerobic ribonucleoside-triphosphate reductase C7U63_09940 PF03477 ATP cone domain C7U63_09950 PF00533 BRCA1 C Terminus (BRCT) domain C7U63_09950 PF01653 NAD-dependent DNA ligase adenylation domain C7U63_09950 PF03120 NAD-dependent DNA ligase OB-fold domain C7U63_09950 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C7U63_09950 PF12826 Helix-hairpin-helix motif C7U63_09955 PF04354 ZipA, C-terminal FtsZ-binding domain C7U63_09970 PF03458 UPF0126 domain C7U63_09980 PF05951 Bacterial protein of unknown function (DUF882) C7U63_09985 PF03734 L,D-transpeptidase catalytic domain C7U63_09985 PF01471 Putative peptidoglycan binding domain C7U63_10000 PF00535 Glycosyl transferase family 2 C7U63_10015 PF00128 Alpha amylase, catalytic domain C7U63_10025 PF00196 Bacterial regulatory proteins, luxR family C7U63_10025 PF00072 Response regulator receiver domain C7U63_10045 PF00999 Sodium/hydrogen exchanger family C7U63_10045 PF02080 TrkA-C domain C7U63_10045 PF02254 TrkA-N domain C7U63_10050 PF00990 Diguanylate cyclase, GGDEF domain C7U63_10055 PF01171 PP-loop family C7U63_10055 PF11734 TilS substrate C-terminal domain C7U63_10055 PF09179 TilS substrate binding domain C7U63_10060 PF01431 Peptidase family M13 C7U63_10060 PF05649 Peptidase family M13 C7U63_10070 PF08543 Phosphomethylpyrimidine kinase C7U63_10075 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C7U63_10075 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C7U63_10075 PF01276 Orn/Lys/Arg decarboxylase, major domain C7U63_10080 PF13520 Amino acid permease C7U63_10085 PF00486 Transcriptional regulatory protein, C terminal C7U63_10085 PF18500 CadC C-terminal domain 1 C7U63_10095 PF13520 Amino acid permease C7U63_10105 PF12706 Beta-lactamase superfamily domain C7U63_10120 PF03466 LysR substrate binding domain C7U63_10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_10130 PF00205 Thiamine pyrophosphate enzyme, central domain C7U63_10130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7U63_10130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7U63_10135 PF03306 Alpha-acetolactate decarboxylase C7U63_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_10140 PF03466 LysR substrate binding domain C7U63_10145 PF00579 tRNA synthetases class I (W and Y) C7U63_10150 PF01551 Peptidase family M23 C7U63_10150 PF01476 LysM domain C7U63_10150 PF08525 Opacity-associated protein A N-terminal motif C7U63_10155 PF03702 Anhydro-N-acetylmuramic acid kinase C7U63_10165 PF01042 Endoribonuclease L-PSP C7U63_10175 PF01965 DJ-1/PfpI family C7U63_10180 PF03466 LysR substrate binding domain C7U63_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_10185 PF00550 Phosphopantetheine attachment site C7U63_10185 PF14765 Polyketide synthase dehydratase C7U63_10185 PF08240 Alcohol dehydrogenase GroES-like domain C7U63_10185 PF02801 Beta-ketoacyl synthase, C-terminal domain C7U63_10185 PF08659 KR domain C7U63_10185 PF00109 Beta-ketoacyl synthase, N-terminal domain C7U63_10185 PF16197 Ketoacyl-synthetase C-terminal extension C7U63_10185 PF00698 Acyl transferase domain C7U63_10195 PF02779 Transketolase, pyrimidine binding domain C7U63_10195 PF02780 Transketolase, C-terminal domain C7U63_10195 PF00456 Transketolase, thiamine diphosphate binding domain C7U63_10200 PF00438 S-adenosylmethionine synthetase, N-terminal domain C7U63_10200 PF02772 S-adenosylmethionine synthetase, central domain C7U63_10200 PF02773 S-adenosylmethionine synthetase, C-terminal domain C7U63_10205 PF17283 SprT-like zinc ribbon domain C7U63_10205 PF10263 SprT-like family C7U63_10210 PF04231 Endonuclease I C7U63_10215 PF04452 RNA methyltransferase C7U63_10220 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C7U63_10220 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C7U63_10225 PF02622 Uncharacterized ACR, COG1678 C7U63_10230 PF03652 Holliday junction resolvase C7U63_10235 PF00854 POT family C7U63_10240 PF03466 LysR substrate binding domain C7U63_10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_10245 PF07690 Major Facilitator Superfamily C7U63_10250 PF17863 AAA lid domain C7U63_10250 PF07726 ATPase family associated with various cellular activities (AAA) C7U63_10260 PF01841 Transglutaminase-like superfamily C7U63_10260 PF11992 Domain of unknown function (DUF3488) C7U63_10260 PF13559 Domain of unknown function (DUF4129) C7U63_10265 PF01235 Sodium:alanine symporter family C7U63_10270 PF00923 Transaldolase/Fructose-6-phosphate aldolase C7U63_10280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C7U63_10285 PF01336 OB-fold nucleic acid binding domain C7U63_10285 PF14579 Helix-hairpin-helix motif C7U63_10285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C7U63_10285 PF07733 Bacterial DNA polymerase III alpha NTPase domain C7U63_10285 PF02811 PHP domain C7U63_10290 PF01351 Ribonuclease HII C7U63_10295 PF02684 Lipid-A-disaccharide synthetase C7U63_10300 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C7U63_10300 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_10305 PF07977 FabA-like domain C7U63_10310 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_10310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C7U63_10315 PF03938 Outer membrane protein (OmpH-like) C7U63_10320 PF01103 Surface antigen C7U63_10320 PF07244 Surface antigen variable number repeat C7U63_10325 PF02163 Peptidase family M50 C7U63_10325 PF17820 PDZ domain C7U63_10330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C7U63_10330 PF13288 DXP reductoisomerase C-terminal domain C7U63_10330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C7U63_10340 PF01255 Putative undecaprenyl diphosphate synthase C7U63_10345 PF01765 Ribosome recycling factor C7U63_10350 PF00696 Amino acid kinase family C7U63_10355 PF00889 Elongation factor TS C7U63_10360 PF00318 Ribosomal protein S2 C7U63_10365 PF00557 Metallopeptidase family M24 C7U63_10370 PF01842 ACT domain C7U63_10370 PF01909 Nucleotidyltransferase domain C7U63_10370 PF01966 HD domain C7U63_10370 PF08335 GlnD PII-uridylyltransferase C7U63_10375 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_10375 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C7U63_10375 PF14602 Hexapeptide repeat of succinyl-transferase C7U63_10380 PF11944 Protein of unknown function (DUF3461) C7U63_10385 PF00367 phosphotransferase system, EIIB C7U63_10385 PF02378 Phosphotransferase system, EIIC C7U63_10390 PF07148 Maltose operon periplasmic protein precursor (MalM) C7U63_10395 PF02264 LamB porin C7U63_10400 PF00258 Flavodoxin C7U63_10405 PF00849 RNA pseudouridylate synthase C7U63_10410 PF04287 tRNA pseudouridine synthase C C7U63_10435 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C7U63_10440 PF07348 Syd protein (SUKH-2) C7U63_10445 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C7U63_10445 PF14489 QueF-like protein C7U63_10455 PF17158 Membrane-associated sensor, integral membrane domain C7U63_10455 PF00990 Diguanylate cyclase, GGDEF domain C7U63_10460 PF11892 Domain of unknown function (DUF3412) C7U63_10460 PF03641 Possible lysine decarboxylase C7U63_10460 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C7U63_10465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C7U63_10465 PF01367 5'-3' exonuclease, C-terminal SAM fold C7U63_10470 PF00180 Isocitrate/isopropylmalate dehydrogenase C7U63_10470 PF18324 Hypothetical protein TT1725 C7U63_10480 PF01728 FtsJ-like methyltransferase C7U63_10480 PF18125 RlmM ferredoxin-like domain C7U63_10485 PF04241 Protein of unknown function (DUF423) C7U63_10495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_10495 PF03466 LysR substrate binding domain C7U63_10500 PF00672 HAMP domain C7U63_10500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_10505 PF00817 impB/mucB/samB family C7U63_10505 PF11799 impB/mucB/samB family C-terminal domain C7U63_10505 PF11798 IMS family HHH motif C7U63_10515 PF01965 DJ-1/PfpI family C7U63_10520 PF08546 Ketopantoate reductase PanE/ApbA C terminal C7U63_10520 PF02558 Ketopantoate reductase PanE/ApbA C7U63_10525 PF04461 Protein of unknown function (DUF520) C7U63_10530 PF03502 Nucleoside-specific channel-forming protein, Tsx C7U63_10535 PF07690 Major Facilitator Superfamily C7U63_10540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C7U63_10550 PF05175 Methyltransferase small domain C7U63_10555 PF01722 BolA-like protein C7U63_10560 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C7U63_10560 PF11973 NQRA C-terminal domain C7U63_10565 PF03116 NQR2, RnfD, RnfE family C7U63_10570 PF04205 FMN-binding domain C7U63_10575 PF02508 Rnf-Nqr subunit, membrane protein C7U63_10580 PF02508 Rnf-Nqr subunit, membrane protein C7U63_10585 PF00175 Oxidoreductase NAD-binding domain C7U63_10585 PF00970 Oxidoreductase FAD-binding domain C7U63_10585 PF00111 2Fe-2S iron-sulfur cluster binding domain C7U63_10590 PF02424 ApbE family C7U63_10635 PF00106 short chain dehydrogenase C7U63_10645 PF00875 DNA photolyase C7U63_10645 PF03441 FAD binding domain of DNA photolyase C7U63_10650 PF13411 MerR HTH family regulatory protein C7U63_10655 PF08349 Protein of unknown function (DUF1722) C7U63_10670 PF06508 Queuosine biosynthesis protein QueC C7U63_10685 PF01817 Chorismate mutase type II C7U63_10685 PF00800 Prephenate dehydratase C7U63_10715 PF16591 Helical bimodular sensor domain C7U63_10715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_10715 PF00672 HAMP domain C7U63_10720 PF03573 outer membrane porin, OprD family C7U63_10725 PF00106 short chain dehydrogenase C7U63_10750 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C7U63_10780 PF00114 Pilin (bacterial filament) C7U63_10780 PF07963 Prokaryotic N-terminal methylation motif C7U63_10785 PF12833 Helix-turn-helix domain C7U63_10785 PF00730 HhH-GPD superfamily base excision DNA repair protein C7U63_10785 PF02805 Metal binding domain of Ada C7U63_10785 PF06029 AlkA N-terminal domain C7U63_10790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C7U63_10790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C7U63_10795 PF12392 Collagenase C7U63_10795 PF01136 Peptidase family U32 C7U63_10800 PF01810 LysE type translocator C7U63_10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_10805 PF03466 LysR substrate binding domain C7U63_10815 PF02743 Cache domain C7U63_10815 PF00672 HAMP domain C7U63_10815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_10835 PF00672 HAMP domain C7U63_10835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_10835 PF12729 Four helix bundle sensory module for signal transduction C7U63_10840 PF01584 CheW-like domain C7U63_10845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_10845 PF00672 HAMP domain C7U63_10850 PF01739 CheR methyltransferase, SAM binding domain C7U63_10850 PF03705 CheR methyltransferase, all-alpha domain C7U63_10855 PF03975 CheD chemotactic sensory transduction C7U63_10860 PF00072 Response regulator receiver domain C7U63_10860 PF01339 CheB methylesterase C7U63_10865 PF00013 KH domain C7U63_10865 PF03725 3' exoribonuclease family, domain 2 C7U63_10865 PF00575 S1 RNA binding domain C7U63_10865 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C7U63_10865 PF01138 3' exoribonuclease family, domain 1 C7U63_10870 PF00312 Ribosomal protein S15 C7U63_10875 PF09157 Pseudouridine synthase II TruB, C-terminal C7U63_10875 PF16198 tRNA pseudouridylate synthase B C-terminal domain C7U63_10875 PF01509 TruB family pseudouridylate synthase (N terminal domain) C7U63_10880 PF02033 Ribosome-binding factor A C7U63_10885 PF08364 Bacterial translation initiation factor IF-2 associated region C7U63_10885 PF11987 Translation-initiation factor 2 C7U63_10885 PF00009 Elongation factor Tu GTP binding domain C7U63_10885 PF04760 Translation initiation factor IF-2, N-terminal region C7U63_10890 PF13184 NusA-like KH domain C7U63_10890 PF08529 NusA N-terminal domain C7U63_10890 PF00575 S1 RNA binding domain C7U63_10895 PF02576 RimP N-terminal domain C7U63_10895 PF17384 RimP C-terminal SH3 domain C7U63_10910 PF03840 Preprotein translocase SecG subunit C7U63_10915 PF00121 Triosephosphate isomerase C7U63_10920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C7U63_10920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C7U63_10920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C7U63_10920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C7U63_10925 PF00809 Pterin binding enzyme C7U63_10930 PF17862 AAA+ lid domain C7U63_10930 PF06480 FtsH Extracellular C7U63_10930 PF00004 ATPase family associated with various cellular activities (AAA) C7U63_10930 PF01434 Peptidase family M41 C7U63_10935 PF01728 FtsJ-like methyltransferase C7U63_10940 PF01985 CRS1 / YhbY (CRM) domain C7U63_10950 PF01272 Transcription elongation factor, GreA/GreB, C-term C7U63_10950 PF03449 Transcription elongation factor, N-terminal C7U63_10955 PF00691 OmpA family C7U63_10955 PF13677 Membrane MotB of proton-channel complex MotA/MotB C7U63_10960 PF01618 MotA/TolQ/ExbB proton channel family C7U63_10965 PF02609 Exonuclease VII small subunit C7U63_10970 PF00348 Polyprenyl synthetase C7U63_10975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C7U63_10975 PF02779 Transketolase, pyrimidine binding domain C7U63_10975 PF02780 Transketolase, C-terminal domain C7U63_10980 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_10980 PF12911 N-terminal TM domain of oligopeptide transport permease C C7U63_10990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_10995 PF00005 ABC transporter C7U63_10995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7U63_11000 PF04608 Phosphatidylglycerophosphatase A C7U63_11005 PF00586 AIR synthase related protein, N-terminal domain C7U63_11005 PF02769 AIR synthase related protein, C-terminal domain C7U63_11010 PF01029 NusB family C7U63_11015 PF00885 6,7-dimethyl-8-ribityllumazine synthase C7U63_11025 PF00925 GTP cyclohydrolase II C7U63_11025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C7U63_11030 PF00677 Lumazine binding domain C7U63_11035 PF01872 RibD C-terminal domain C7U63_11035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C7U63_11040 PF03477 ATP cone domain C7U63_11045 PF00464 Serine hydroxymethyltransferase C7U63_11055 PF00072 Response regulator receiver domain C7U63_11055 PF00512 His Kinase A (phospho-acceptor) domain C7U63_11055 PF00672 HAMP domain C7U63_11055 PF01627 Hpt domain C7U63_11055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_11060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C7U63_11070 PF00072 Response regulator receiver domain C7U63_11070 PF00486 Transcriptional regulatory protein, C terminal C7U63_11075 PF03264 NapC/NirT cytochrome c family, N-terminal region C7U63_11080 PF00384 Molybdopterin oxidoreductase C7U63_11080 PF01568 Molydopterin dinucleotide binding domain C7U63_11080 PF18364 Molybdopterin oxidoreductase N-terminal domain C7U63_11085 PF02613 Nitrate reductase delta subunit C7U63_11095 PF00990 Diguanylate cyclase, GGDEF domain C7U63_11095 PF03707 Bacterial signalling protein N terminal repeat C7U63_11095 PF00563 EAL domain C7U63_11105 PF13193 AMP-binding enzyme C-terminal domain C7U63_11105 PF00501 AMP-binding enzyme C7U63_11105 PF16177 Acetyl-coenzyme A synthetase N-terminus C7U63_11110 PF01220 Dehydroquinase class II C7U63_11115 PF00364 Biotin-requiring enzyme C7U63_11120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7U63_11120 PF02785 Biotin carboxylase C-terminal domain C7U63_11120 PF00289 Biotin carboxylase, N-terminal domain C7U63_11130 PF00474 Sodium:solute symporter family C7U63_11135 PF00367 phosphotransferase system, EIIB C7U63_11135 PF02378 Phosphotransferase system, EIIC C7U63_11135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C7U63_11140 PF03466 LysR substrate binding domain C7U63_11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_11145 PF08240 Alcohol dehydrogenase GroES-like domain C7U63_11145 PF00107 Zinc-binding dehydrogenase C7U63_11155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7U63_11155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7U63_11160 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_11160 PF12464 Maltose acetyltransferase C7U63_11165 PF00881 Nitroreductase family C7U63_11170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7U63_11170 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_11175 PF01343 Peptidase family S49 C7U63_11180 PF03734 L,D-transpeptidase catalytic domain C7U63_11180 PF17969 L,D-transpeptidase C-terminal domain C7U63_11195 PF02472 Biopolymer transport protein ExbD/TolR C7U63_11200 PF01618 MotA/TolQ/ExbB proton channel family C7U63_11205 PF01618 MotA/TolQ/ExbB proton channel family C7U63_11215 PF07715 TonB-dependent Receptor Plug Domain C7U63_11215 PF00593 TonB dependent receptor C7U63_11220 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_11225 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_11225 PF12911 N-terminal TM domain of oligopeptide transport permease C C7U63_11235 PF00005 ABC transporter C7U63_11235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7U63_11240 PF00005 ABC transporter C7U63_11240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7U63_11250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C7U63_11250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C7U63_11250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C7U63_11255 PF01370 NAD dependent epimerase/dehydratase family C7U63_11260 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) C7U63_11275 PF01464 Transglycosylase SLT domain C7U63_11290 PF12848 ABC transporter C7U63_11290 PF00005 ABC transporter C7U63_11300 PF00860 Permease family C7U63_11305 PF00749 tRNA synthetases class I (E and Q), catalytic domain C7U63_11310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_11310 PF00672 HAMP domain C7U63_11320 PF00313 'Cold-shock' DNA-binding domain C7U63_11360 PF00929 Exonuclease C7U63_11365 PF03193 RsgA GTPase C7U63_11370 PF02666 Phosphatidylserine decarboxylase C7U63_11375 PF09905 DNA-binding protein VF530 C7U63_11390 PF00171 Aldehyde dehydrogenase family C7U63_11395 PF01472 PUA domain C7U63_11395 PF00696 Amino acid kinase family C7U63_11400 PF07417 Sigma factor-binding transcriptional regulator Crl C7U63_11410 PF00156 Phosphoribosyl transferase domain C7U63_11420 PF07687 Peptidase dimerisation domain C7U63_11420 PF01546 Peptidase family M20/M25/M40 C7U63_11425 PF00226 DnaJ domain C7U63_11425 PF05099 Tellurite resistance protein TerB C7U63_11430 PF00483 Nucleotidyl transferase C7U63_11435 PF01636 Phosphotransferase enzyme family C7U63_11440 PF03968 OstA-like protein C7U63_11440 PF04453 LPS transport system D C7U63_11445 PF09312 SurA N-terminal domain C7U63_11445 PF00639 PPIC-type PPIASE domain C7U63_11450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C7U63_11455 PF00398 Ribosomal RNA adenine dimethylase C7U63_11460 PF04379 ApaG domain C7U63_11465 PF00149 Calcineurin-like phosphoesterase C7U63_11480 PF00296 Luciferase-like monooxygenase C7U63_11495 PF01018 GTP1/OBG C7U63_11495 PF01926 50S ribosome-binding GTPase C7U63_11500 PF01016 Ribosomal L27 protein C7U63_11505 PF00829 Ribosomal prokaryotic L21 protein C7U63_11510 PF00348 Polyprenyl synthetase C7U63_11515 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C7U63_11520 PF01145 SPFH domain / Band 7 family C7U63_11525 PF12221 Bacterial membrane protein N terminal C7U63_11525 PF01145 SPFH domain / Band 7 family C7U63_11530 PF01926 50S ribosome-binding GTPase C7U63_11530 PF13167 GTP-binding GTPase N-terminal C7U63_11530 PF16360 GTP-binding GTPase Middle Region C7U63_11535 PF17209 Hfq protein C7U63_11545 PF08676 MutL C terminal dimerisation domain C7U63_11545 PF01119 DNA mismatch repair protein, C-terminal domain C7U63_11550 PF01119 DNA mismatch repair protein, C-terminal domain C7U63_11550 PF08676 MutL C terminal dimerisation domain C7U63_11555 PF01520 N-acetylmuramoyl-L-alanine amidase C7U63_11560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C7U63_11565 PF03853 YjeF-related protein N-terminus C7U63_11565 PF01256 Carbohydrate kinase C7U63_11570 PF08331 Domain of unknown function (DUF1730) C7U63_11575 PF00480 ROK family C7U63_11585 PF09383 NIL domain C7U63_11585 PF00005 ABC transporter C7U63_11590 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_11600 PF02357 Transcription termination factor nusG C7U63_11605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_11605 PF00672 HAMP domain C7U63_11610 PF00563 EAL domain C7U63_11610 PF03707 Bacterial signalling protein N terminal repeat C7U63_11610 PF00990 Diguanylate cyclase, GGDEF domain C7U63_11615 PF00072 Response regulator receiver domain C7U63_11615 PF00512 His Kinase A (phospho-acceptor) domain C7U63_11615 PF09456 RcsC Alpha-Beta-Loop (ABL) C7U63_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_11625 PF13286 Phosphohydrolase-associated domain C7U63_11625 PF01966 HD domain C7U63_11630 PF00512 His Kinase A (phospho-acceptor) domain C7U63_11630 PF18415 Histidine kinase receptor ArcB trans-membrane domain C7U63_11630 PF01627 Hpt domain C7U63_11630 PF00989 PAS fold C7U63_11630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_11630 PF00072 Response regulator receiver domain C7U63_11650 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C7U63_11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_11655 PF03466 LysR substrate binding domain C7U63_11665 PF01259 SAICAR synthetase C7U63_11670 PF06804 NlpB/DapX lipoprotein C7U63_11675 PF00701 Dihydrodipicolinate synthetase family C7U63_11680 PF01842 ACT domain C7U63_11685 PF00578 AhpC/TSA family C7U63_11690 PF03887 YfbU domain C7U63_11695 PF04217 Protein of unknown function, DUF412 C7U63_11700 PF00871 Acetokinase family C7U63_11705 PF07085 DRTGG domain C7U63_11705 PF01515 Phosphate acetyl/butaryl transferase C7U63_11715 PF00483 Nucleotidyl transferase C7U63_11720 PF00854 POT family C7U63_11725 PF00072 Response regulator receiver domain C7U63_11755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_11760 PF02321 Outer membrane efflux protein C7U63_11765 PF01207 Dihydrouridine synthase (Dus) C7U63_11770 PF02954 Bacterial regulatory protein, Fis family C7U63_11785 PF10369 Small subunit of acetolactate synthase C7U63_11795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7U63_11795 PF00205 Thiamine pyrophosphate enzyme, central domain C7U63_11795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7U63_11810 PF01569 PAP2 superfamily C7U63_11820 PF08502 LeuA allosteric (dimerisation) domain C7U63_11820 PF00682 HMGL-like C7U63_11825 PF00180 Isocitrate/isopropylmalate dehydrogenase C7U63_11830 PF00330 Aconitase family (aconitate hydratase) C7U63_11835 PF00694 Aconitase C-terminal domain C7U63_11860 PF00005 ABC transporter C7U63_11865 PF13638 PIN domain C7U63_11865 PF02562 PhoH-like protein C7U63_11875 PF08343 Ribonucleotide reductase N-terminal C7U63_11875 PF00317 Ribonucleotide reductase, all-alpha domain C7U63_11875 PF02867 Ribonucleotide reductase, barrel domain C7U63_11910 PF03707 Bacterial signalling protein N terminal repeat C7U63_11910 PF00990 Diguanylate cyclase, GGDEF domain C7U63_11910 PF00563 EAL domain C7U63_11920 PF00118 TCP-1/cpn60 chaperonin family C7U63_11925 PF00166 Chaperonin 10 Kd subunit C7U63_11940 PF04186 FxsA cytoplasmic membrane protein C7U63_11945 PF00206 Lyase C7U63_11945 PF10415 Fumarase C C-terminus C7U63_11950 PF03605 Anaerobic c4-dicarboxylate membrane transporter C7U63_11955 PF00814 Glycoprotease family C7U63_11960 PF01165 Ribosomal protein S21 C7U63_11965 PF09424 Yqey-like protein C7U63_11970 PF01807 CHC2 zinc finger C7U63_11970 PF10410 DnaB-helicase binding domain of primase C7U63_11970 PF08275 DNA primase catalytic core, N-terminal domain C7U63_11970 PF08278 DNA primase DnaG DnaB-binding C7U63_11975 PF03979 Sigma-70 factor, region 1.1 C7U63_11975 PF04546 Sigma-70, non-essential region C7U63_11975 PF00140 Sigma-70 factor, region 1.2 C7U63_11975 PF04542 Sigma-70 region 2 C7U63_11975 PF04539 Sigma-70 region 3 C7U63_11975 PF04545 Sigma-70, region 4 C7U63_11995 PF02843 Phosphoribosylglycinamide synthetase, C domain C7U63_11995 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C7U63_11995 PF02844 Phosphoribosylglycinamide synthetase, N domain C7U63_12000 PF01808 AICARFT/IMPCHase bienzyme C7U63_12000 PF02142 MGS-like domain C7U63_12005 PF13411 MerR HTH family regulatory protein C7U63_12010 PF03889 Alternative ribosome-rescue factor A C7U63_12015 PF04055 Radical SAM superfamily C7U63_12015 PF06969 HemN C-terminal domain C7U63_12020 PF01725 Ham1 family C7U63_12025 PF07690 Major Facilitator Superfamily C7U63_12030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7U63_12030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7U63_12040 PF13302 Acetyltransferase (GNAT) domain C7U63_12045 PF13302 Acetyltransferase (GNAT) domain C7U63_12050 PF01447 Thermolysin metallopeptidase, catalytic domain C7U63_12050 PF04151 Bacterial pre-peptidase C-terminal domain C7U63_12050 PF02868 Thermolysin metallopeptidase, alpha-helical domain C7U63_12050 PF03413 Peptidase propeptide and YPEB domain C7U63_12050 PF07504 Fungalysin/Thermolysin Propeptide Motif C7U63_12055 PF03466 LysR substrate binding domain C7U63_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_12060 PF07690 Major Facilitator Superfamily C7U63_12065 PF00583 Acetyltransferase (GNAT) family C7U63_12070 PF16658 Class II release factor RF3, C-terminal domain C7U63_12070 PF03144 Elongation factor Tu domain 2 C7U63_12070 PF00009 Elongation factor Tu GTP binding domain C7U63_12080 PF00072 Response regulator receiver domain C7U63_12080 PF00990 Diguanylate cyclase, GGDEF domain C7U63_12085 PF05762 VWA domain containing CoxE-like protein C7U63_12090 PF12592 Protein of unknown function (DUF3763) C7U63_12090 PF17868 AAA lid domain C7U63_12090 PF07728 AAA domain (dynein-related subfamily) C7U63_12110 PF00501 AMP-binding enzyme C7U63_12115 PF04262 Glutamate-cysteine ligase C7U63_12120 PF05193 Peptidase M16 inactive domain C7U63_12120 PF00675 Insulinase (Peptidase family M16) C7U63_12125 PF09335 SNARE associated Golgi protein C7U63_12130 PF00107 Zinc-binding dehydrogenase C7U63_12130 PF08240 Alcohol dehydrogenase GroES-like domain C7U63_12140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7U63_12160 PF00970 Oxidoreductase FAD-binding domain C7U63_12160 PF00175 Oxidoreductase NAD-binding domain C7U63_12165 PF01281 Ribosomal protein L9, N-terminal domain C7U63_12165 PF03948 Ribosomal protein L9, C-terminal domain C7U63_12170 PF01084 Ribosomal protein S18 C7U63_12175 PF01250 Ribosomal protein S6 C7U63_12180 PF01566 Natural resistance-associated macrophage protein C7U63_12185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C7U63_12185 PF01411 tRNA synthetases class II (A) C7U63_12185 PF02272 DHHA1 domain C7U63_12195 PF00216 Bacterial DNA-binding protein C7U63_12200 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C7U63_12205 PF07238 PilZ domain C7U63_12210 PF18073 Rubredoxin metal binding domain C7U63_12225 PF18429 Domain of unknown function (DUF5609) C7U63_12235 PF01048 Phosphorylase superfamily C7U63_12240 PF01676 Metalloenzyme superfamily C7U63_12245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C7U63_12245 PF02885 Glycosyl transferase family, helical bundle domain C7U63_12245 PF00591 Glycosyl transferase family, a/b domain C7U63_12250 PF01791 DeoC/LacD family aldolase C7U63_12260 PF07662 Na+ dependent nucleoside transporter C-terminus C7U63_12260 PF01773 Na+ dependent nucleoside transporter N-terminus C7U63_12260 PF07670 Nucleoside recognition C7U63_12265 PF01026 TatD related DNase C7U63_12270 PF14245 Type IV pilin PilA C7U63_12270 PF07963 Prokaryotic N-terminal methylation motif C7U63_12280 PF02664 S-Ribosylhomocysteinase (LuxS) C7U63_12290 PF00543 Nitrogen regulatory protein P-II C7U63_12295 PF00795 Carbon-nitrogen hydrolase C7U63_12295 PF02540 NAD synthase C7U63_12330 PF00114 Pilin (bacterial filament) C7U63_12330 PF07963 Prokaryotic N-terminal methylation motif C7U63_12335 PF02401 LytB protein C7U63_12340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7U63_12345 PF01252 Signal peptidase (SPase) II C7U63_12350 PF00133 tRNA synthetases class I (I, L, M and V) C7U63_12350 PF08264 Anticodon-binding domain of tRNA C7U63_12350 PF06827 Zinc finger found in FPG and IleRS C7U63_12355 PF06574 FAD synthetase C7U63_12355 PF01687 Riboflavin kinase C7U63_12360 PF03023 Lipid II flippase MurJ C7U63_12365 PF01649 Ribosomal protein S20 C7U63_12370 PF01022 Bacterial regulatory protein, arsR family C7U63_12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_12375 PF03466 LysR substrate binding domain C7U63_12385 PF06965 Na+/H+ antiporter 1 C7U63_12390 PF00303 Thymidylate synthase C7U63_12395 PF01790 Prolipoprotein diacylglyceryl transferase C7U63_12400 PF05524 PEP-utilising enzyme, N-terminal C7U63_12400 PF01590 GAF domain C7U63_12400 PF00391 PEP-utilising enzyme, mobile domain C7U63_12400 PF02896 PEP-utilising enzyme, TIM barrel domain C7U63_12405 PF00293 NUDIX domain C7U63_12410 PF02976 DNA mismatch repair enzyme MutH C7U63_12420 PF01245 Ribosomal protein L19 C7U63_12425 PF01746 tRNA (Guanine-1)-methyltransferase C7U63_12430 PF01782 RimM N-terminal domain C7U63_12430 PF05239 PRC-barrel domain C7U63_12435 PF00886 Ribosomal protein S16 C7U63_12440 PF02978 Signal peptide binding domain C7U63_12440 PF02881 SRP54-type protein, helical bundle domain C7U63_12440 PF00448 SRP54-type protein, GTPase domain C7U63_12445 PF01578 Cytochrome C assembly protein C7U63_12450 PF03471 Transporter associated domain C7U63_12450 PF00571 CBS domain C7U63_12450 PF01595 Cyclin M transmembrane N-terminal domain C7U63_12455 PF02082 Transcriptional regulator C7U63_12460 PF00175 Oxidoreductase NAD-binding domain C7U63_12460 PF00042 Globin C7U63_12460 PF00970 Oxidoreductase FAD-binding domain C7U63_12465 PF08238 Sel1 repeat C7U63_12470 PF00056 lactate/malate dehydrogenase, NAD binding domain C7U63_12470 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C7U63_12475 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_12480 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_12485 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_12490 PF00005 ABC transporter C7U63_12495 PF01316 Arginine repressor, DNA binding domain C7U63_12495 PF02863 Arginine repressor, C-terminal domain C7U63_12500 PF04261 Dyp-type peroxidase family C7U63_12505 PF00005 ABC transporter C7U63_12505 PF08402 TOBE domain C7U63_12515 PF13416 Bacterial extracellular solute-binding protein C7U63_12520 PF00543 Nitrogen regulatory protein P-II C7U63_12525 PF00472 RF-1 domain C7U63_12530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C7U63_12530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C7U63_12540 PF03883 Peroxide stress protein YaaA C7U63_12545 PF00437 Type II/IV secretion system protein C7U63_12550 PF00437 Type II/IV secretion system protein C7U63_12555 PF01168 Alanine racemase, N-terminal domain C7U63_12560 PF03807 NADP oxidoreductase coenzyme F420-dependent C7U63_12560 PF14748 Pyrroline-5-carboxylate reductase dimerisation C7U63_12565 PF02325 YGGT family C7U63_12570 PF02594 Uncharacterised ACR, YggU family COG1872 C7U63_12580 PF07662 Na+ dependent nucleoside transporter C-terminus C7U63_12580 PF07670 Nucleoside recognition C7U63_12580 PF01773 Na+ dependent nucleoside transporter N-terminus C7U63_12585 PF03466 LysR substrate binding domain C7U63_12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_12590 PF00255 Glutathione peroxidase C7U63_12600 PF02595 Glycerate kinase family C7U63_12605 PF02447 GntP family permease C7U63_12610 PF05651 Putative sugar diacid recognition C7U63_12610 PF13556 PucR C-terminal helix-turn-helix domain C7U63_12610 PF17853 GGDEF-like domain C7U63_12615 PF06062 Uncharacterised protein family (UPF0231) C7U63_12645 PF00271 Helicase conserved C-terminal domain C7U63_12645 PF00270 DEAD/DEAH box helicase C7U63_12655 PF08534 Redoxin C7U63_12660 PF00403 Heavy-metal-associated domain C7U63_12665 PF17967 Pullulanase N2 domain C7U63_12665 PF18494 Pullulanase Ins domain C7U63_12665 PF11852 Domain of unknown function (DUF3372) C7U63_12665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C7U63_12665 PF03714 Bacterial pullanase-associated domain C7U63_12680 PF02583 Metal-sensitive transcriptional repressor C7U63_12685 PF00155 Aminotransferase class I and II C7U63_12690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_12690 PF03466 LysR substrate binding domain C7U63_12700 PF04055 Radical SAM superfamily C7U63_12705 PF11230 Protein of unknown function (DUF3029) C7U63_12730 PF00175 Oxidoreductase NAD-binding domain C7U63_12730 PF00970 Oxidoreductase FAD-binding domain C7U63_12730 PF00111 2Fe-2S iron-sulfur cluster binding domain C7U63_12745 PF12729 Four helix bundle sensory module for signal transduction C7U63_12745 PF00672 HAMP domain C7U63_12745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_12750 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C7U63_12750 PF18416 N-acetylglucosamine binding protein domain 2 C7U63_12755 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_12760 PF00005 ABC transporter C7U63_12765 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_12770 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_12775 PF00291 Pyridoxal-phosphate dependent enzyme C7U63_12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_12780 PF03466 LysR substrate binding domain C7U63_12785 PF00005 ABC transporter C7U63_12785 PF12857 TOBE-like domain C7U63_12790 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_12795 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_12810 PF13194 Domain of unknown function (DUF4010) C7U63_12815 PF12464 Maltose acetyltransferase C7U63_12815 PF14602 Hexapeptide repeat of succinyl-transferase C7U63_12830 PF13419 Haloacid dehalogenase-like hydrolase C7U63_12835 PF00293 NUDIX domain C7U63_12840 PF00459 Inositol monophosphatase family C7U63_12845 PF03222 Tryptophan/tyrosine permease family C7U63_12850 PF01588 Putative tRNA binding domain C7U63_12855 PF12833 Helix-turn-helix domain C7U63_12855 PF02311 AraC-like ligand binding domain C7U63_12860 PF01340 Met Apo-repressor, MetJ C7U63_12865 PF01053 Cys/Met metabolism PLP-dependent enzyme C7U63_12870 PF00696 Amino acid kinase family C7U63_12870 PF00742 Homoserine dehydrogenase C7U63_12870 PF03447 Homoserine dehydrogenase, NAD binding domain C7U63_12880 PF01384 Phosphate transporter family C7U63_12885 PF01865 Protein of unknown function DUF47 C7U63_12895 PF00701 Dihydrodipicolinate synthetase family C7U63_12900 PF05175 Methyltransferase small domain C7U63_12900 PF08468 Methyltransferase small domain N-terminal C7U63_12905 PF00483 Nucleotidyl transferase C7U63_12910 PF08323 Starch synthase catalytic domain C7U63_12910 PF00534 Glycosyl transferases group 1 C7U63_12950 PF03553 Na+/H+ antiporter family C7U63_12955 PF01521 Iron-sulphur cluster biosynthesis C7U63_12965 PF00654 Voltage gated chloride channel C7U63_12970 PF00202 Aminotransferase class-III C7U63_12985 PF06965 Na+/H+ antiporter 1 C7U63_12985 PF13462 Thioredoxin C7U63_13020 PF01381 Helix-turn-helix C7U63_13020 PF07883 Cupin domain C7U63_13025 PF03594 Benzoate membrane transport protein C7U63_13035 PF02219 Methylenetetrahydrofolate reductase C7U63_13050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_13050 PF00672 HAMP domain C7U63_13055 PF03922 OmpW family C7U63_13060 PF17158 Membrane-associated sensor, integral membrane domain C7U63_13060 PF00990 Diguanylate cyclase, GGDEF domain C7U63_13065 PF17760 UvrA interaction domain C7U63_13065 PF00005 ABC transporter C7U63_13065 PF17755 UvrA DNA-binding domain C7U63_13085 PF03783 Curli production assembly/transport component CsgG C7U63_13095 PF10627 Curli assembly protein CsgE C7U63_13100 PF00196 Bacterial regulatory proteins, luxR family C7U63_13105 PF00436 Single-strand binding protein family C7U63_13110 PF02899 Phage integrase, N-terminal SAM-like domain C7U63_13110 PF00589 Phage integrase family C7U63_13135 PF14490 Helix-hairpin-helix containing domain C7U63_13135 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C7U63_13135 PF13538 UvrD-like helicase C-terminal domain C7U63_13145 PF00816 H-NS histone family C7U63_13165 PF01219 Prokaryotic diacylglycerol kinase C7U63_13170 PF08019 Phosphoethanolamine transferase EptA/EptB C7U63_13170 PF00884 Sulfatase C7U63_13175 PF08019 Phosphoethanolamine transferase EptA/EptB C7U63_13175 PF00884 Sulfatase C7U63_13180 PF00892 EamA-like transporter family C7U63_13195 PF05598 Transposase domain (DUF772) C7U63_13195 PF01609 Transposase DDE domain C7U63_13210 PF00486 Transcriptional regulatory protein, C terminal C7U63_13210 PF00072 Response regulator receiver domain C7U63_13215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_13215 PF00672 HAMP domain C7U63_13215 PF00512 His Kinase A (phospho-acceptor) domain C7U63_13225 PF05275 Copper resistance protein B precursor (CopB) C7U63_13230 PF00394 Multicopper oxidase C7U63_13230 PF07731 Multicopper oxidase C7U63_13230 PF07732 Multicopper oxidase C7U63_13270 PF16916 Dimerisation domain of Zinc Transporter C7U63_13270 PF01545 Cation efflux family C7U63_13280 PF00313 'Cold-shock' DNA-binding domain C7U63_13285 PF00860 Permease family C7U63_13290 PF02733 Dak1 domain C7U63_13295 PF02734 DAK2 domain C7U63_13300 PF00391 PEP-utilising enzyme, mobile domain C7U63_13300 PF05524 PEP-utilising enzyme, N-terminal C7U63_13300 PF03610 PTS system fructose IIA component C7U63_13300 PF00381 PTS HPr component phosphorylation site C7U63_13305 PF00465 Iron-containing alcohol dehydrogenase C7U63_13310 PF00158 Sigma-54 interaction domain C7U63_13310 PF02954 Bacterial regulatory protein, Fis family C7U63_13310 PF00989 PAS fold C7U63_13325 PF01594 AI-2E family transporter C7U63_13330 PF01569 PAP2 superfamily C7U63_13340 PF01479 S4 domain C7U63_13345 PF01430 Hsp33 protein C7U63_13355 PF00392 Bacterial regulatory proteins, gntR family C7U63_13360 PF01321 Creatinase/Prolidase N-terminal domain C7U63_13360 PF00557 Metallopeptidase family M24 C7U63_13365 PF11756 Nitrous oxide-stimulated promoter C7U63_13370 PF00583 Acetyltransferase (GNAT) family C7U63_13375 PF05433 Glycine zipper 2TM domain C7U63_13380 PF00909 Ammonium Transporter Family C7U63_13385 PF00990 Diguanylate cyclase, GGDEF domain C7U63_13395 PF06055 Exopolysaccharide synthesis, ExoD C7U63_13405 PF17151 Periplasmic sensor domain C7U63_13405 PF00990 Diguanylate cyclase, GGDEF domain C7U63_13415 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_13430 PF05598 Transposase domain (DUF772) C7U63_13430 PF01609 Transposase DDE domain C7U63_13435 PF04055 Radical SAM superfamily C7U63_13435 PF06968 Biotin and Thiamin Synthesis associated domain C7U63_13440 PF05690 Thiazole biosynthesis protein ThiG C7U63_13450 PF00899 ThiF family C7U63_13455 PF02581 Thiamine monophosphate synthase C7U63_13460 PF13667 ThiC-associated domain C7U63_13460 PF01964 Radical SAM ThiC family C7U63_13465 PF03738 Glutathionylspermidine synthase preATP-grasp C7U63_13475 PF03994 Domain of Unknown Function (DUF350) C7U63_13480 PF03440 Aerolysin/Pertussis toxin (APT) domain C7U63_13480 PF01117 Aerolysin toxin C7U63_13495 PF00486 Transcriptional regulatory protein, C terminal C7U63_13495 PF00072 Response regulator receiver domain C7U63_13505 PF08443 RimK-like ATP-grasp domain C7U63_13505 PF18030 RimK PreATP-grasp domain C7U63_13510 PF02574 Homocysteine S-methyltransferase C7U63_13510 PF02310 B12 binding domain C7U63_13510 PF02607 B12 binding domain C7U63_13510 PF02965 Vitamin B12 dependent methionine synthase, activation domain C7U63_13510 PF00809 Pterin binding enzyme C7U63_13515 PF00999 Sodium/hydrogen exchanger family C7U63_13525 PF13356 Arm DNA-binding domain C7U63_13525 PF00589 Phage integrase family C7U63_13525 PF14659 Phage integrase, N-terminal SAM-like domain C7U63_13560 PF18019 HD domain C7U63_13560 PF18395 Cas3 C-terminal domain C7U63_13565 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) C7U63_13580 PF09344 CT1975-like protein C7U63_13590 PF01867 CRISPR associated protein Cas1 C7U63_13595 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) C7U63_13620 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C7U63_13630 PF07690 Major Facilitator Superfamily C7U63_13635 PF01914 MarC family integral membrane protein C7U63_13645 PF01523 Putative modulator of DNA gyrase C7U63_13650 PF00795 Carbon-nitrogen hydrolase C7U63_13660 PF13116 Protein of unknown function C7U63_13660 PF13502 AsmA-like C-terminal region C7U63_13665 PF10150 Ribonuclease E/G family C7U63_13665 PF00575 S1 RNA binding domain C7U63_13670 PF02545 Maf-like protein C7U63_13675 PF04093 rod shape-determining protein MreD C7U63_13680 PF04085 rod shape-determining protein MreC C7U63_13720 PF07963 Prokaryotic N-terminal methylation motif C7U63_13720 PF08334 Type II secretion system (T2SS), protein G C7U63_13735 PF00482 Type II secretion system (T2SS), protein F C7U63_13740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C7U63_13740 PF00437 Type II/IV secretion system protein C7U63_13750 PF13401 AAA domain C7U63_13750 PF09077 Mu B transposition protein, C terminal C7U63_13755 PF00263 Bacterial type II and III secretion system protein C7U63_13755 PF03958 Bacterial type II/III secretion system short domain C7U63_13785 PF17157 Gammaproteobacterial periplasmic sensor domain C7U63_13785 PF00563 EAL domain C7U63_13785 PF00990 Diguanylate cyclase, GGDEF domain C7U63_13790 PF00563 EAL domain C7U63_13790 PF12792 CSS motif domain associated with EAL C7U63_13795 PF01699 Sodium/calcium exchanger protein C7U63_13800 PF00221 Aromatic amino acid lyase C7U63_13805 PF01175 Urocanase Rossmann-like domain C7U63_13805 PF17392 Urocanase C-terminal domain C7U63_13805 PF17391 Urocanase N-terminal domain C7U63_13810 PF00491 Arginase family C7U63_13815 PF01979 Amidohydrolase family C7U63_13820 PF07702 UTRA domain C7U63_13820 PF00392 Bacterial regulatory proteins, gntR family C7U63_13825 PF00484 Carbonic anhydrase C7U63_13830 PF00140 Sigma-70 factor, region 1.2 C7U63_13830 PF04542 Sigma-70 region 2 C7U63_13830 PF04545 Sigma-70, region 4 C7U63_13835 PF18075 FtsX extracellular domain C7U63_13840 PF00005 ABC transporter C7U63_13845 PF00448 SRP54-type protein, GTPase domain C7U63_13845 PF02881 SRP54-type protein, helical bundle domain C7U63_13870 PF02254 TrkA-N domain C7U63_13870 PF00999 Sodium/hydrogen exchanger family C7U63_13875 PF02525 Flavodoxin-like fold C7U63_13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_13880 PF03466 LysR substrate binding domain C7U63_13885 PF00106 short chain dehydrogenase C7U63_13900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C7U63_13900 PF00326 Prolyl oligopeptidase family C7U63_13920 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_13920 PF01464 Transglycosylase SLT domain C7U63_13930 PF02416 mttA/Hcf106 family C7U63_13935 PF03466 LysR substrate binding domain C7U63_13935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_13940 PF01914 MarC family integral membrane protein C7U63_13945 PF10678 Protein of unknown function (DUF2492) C7U63_13950 PF00375 Sodium:dicarboxylate symporter family C7U63_13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_13960 PF03466 LysR substrate binding domain C7U63_13965 PF13533 Biotin-lipoyl like C7U63_13970 PF07690 Major Facilitator Superfamily C7U63_13975 PF07947 YhhN family C7U63_13995 PF00440 Bacterial regulatory proteins, tetR family C7U63_14035 PF00009 Elongation factor Tu GTP binding domain C7U63_14035 PF03144 Elongation factor Tu domain 2 C7U63_14035 PF03143 Elongation factor Tu C-terminal domain C7U63_14040 PF00679 Elongation factor G C-terminus C7U63_14040 PF00009 Elongation factor Tu GTP binding domain C7U63_14040 PF03764 Elongation factor G, domain IV C7U63_14040 PF03144 Elongation factor Tu domain 2 C7U63_14040 PF14492 Elongation Factor G, domain II C7U63_14045 PF00177 Ribosomal protein S7p/S5e C7U63_14050 PF00164 Ribosomal protein S12/S23 C7U63_14055 PF04077 DsrH like protein C7U63_14060 PF02635 DsrE/DsrF-like family C7U63_14065 PF02635 DsrE/DsrF-like family C7U63_14070 PF01042 Endoribonuclease L-PSP C7U63_14075 PF13309 HTH domain C7U63_14075 PF08348 YheO-like PAS domain C7U63_14080 PF05000 RNA polymerase Rpb1, domain 4 C7U63_14080 PF04997 RNA polymerase Rpb1, domain 1 C7U63_14080 PF00623 RNA polymerase Rpb1, domain 2 C7U63_14080 PF04998 RNA polymerase Rpb1, domain 5 C7U63_14080 PF04983 RNA polymerase Rpb1, domain 3 C7U63_14085 PF04563 RNA polymerase beta subunit C7U63_14085 PF04561 RNA polymerase Rpb2, domain 2 C7U63_14085 PF04565 RNA polymerase Rpb2, domain 3 C7U63_14085 PF10385 RNA polymerase beta subunit external 1 domain C7U63_14085 PF00562 RNA polymerase Rpb2, domain 6 C7U63_14085 PF04560 RNA polymerase Rpb2, domain 7 C7U63_14090 PF00542 Ribosomal protein L7/L12 C-terminal domain C7U63_14090 PF16320 Ribosomal protein L7/L12 dimerisation domain C7U63_14095 PF00466 Ribosomal protein L10 C7U63_14100 PF00687 Ribosomal protein L1p/L10e family C7U63_14105 PF00298 Ribosomal protein L11, RNA binding domain C7U63_14105 PF03946 Ribosomal protein L11, N-terminal domain C7U63_14110 PF02357 Transcription termination factor nusG C7U63_14110 PF00467 KOW motif C7U63_14115 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C7U63_14125 PF03144 Elongation factor Tu domain 2 C7U63_14125 PF00009 Elongation factor Tu GTP binding domain C7U63_14125 PF03143 Elongation factor Tu C-terminal domain C7U63_14140 PF00485 Phosphoribulokinase / Uridine kinase family C7U63_14145 PF08279 HTH domain C7U63_14145 PF03099 Biotin/lipoate A/B protein ligase family C7U63_14145 PF02237 Biotin protein ligase C terminal domain C7U63_14150 PF01565 FAD binding domain C7U63_14150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C7U63_14155 PF02254 TrkA-N domain C7U63_14155 PF02080 TrkA-C domain C7U63_14160 PF02386 Cation transport protein C7U63_14165 PF01131 DNA topoisomerase C7U63_14165 PF01751 Toprim domain C7U63_14175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_14175 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_14175 PF00512 His Kinase A (phospho-acceptor) domain C7U63_14180 PF03264 NapC/NirT cytochrome c family, N-terminal region C7U63_14185 PF01568 Molydopterin dinucleotide binding domain C7U63_14185 PF18364 Molybdopterin oxidoreductase N-terminal domain C7U63_14185 PF00384 Molybdopterin oxidoreductase C7U63_14195 PF08918 PhoQ Sensor C7U63_14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_14200 PF00072 Response regulator receiver domain C7U63_14200 PF00486 Transcriptional regulatory protein, C terminal C7U63_14215 PF01794 Ferric reductase like transmembrane component C7U63_14220 PF00174 Oxidoreductase molybdopterin binding domain C7U63_14230 PF06496 Protein of unknown function (DUF1097) C7U63_14235 PF00072 Response regulator receiver domain C7U63_14235 PF00158 Sigma-54 interaction domain C7U63_14245 PF00512 His Kinase A (phospho-acceptor) domain C7U63_14245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_14265 PF00478 IMP dehydrogenase / GMP reductase domain C7U63_14265 PF00571 CBS domain C7U63_14270 PF10063 Uncharacterized integral membrane protein (DUF2301) C7U63_14280 PF01037 Lrp/AsnC ligand binding domain C7U63_14285 PF03590 Aspartate-ammonia ligase C7U63_14295 PF10431 C-terminal, D2-small domain, of ClpB protein C7U63_14295 PF07724 AAA domain (Cdc48 subfamily) C7U63_14295 PF17871 AAA lid domain C7U63_14295 PF00004 ATPase family associated with various cellular activities (AAA) C7U63_14295 PF02861 Clp amino terminal domain, pathogenicity island component C7U63_14305 PF00849 RNA pseudouridylate synthase C7U63_14305 PF01479 S4 domain C7U63_14310 PF13525 Outer membrane lipoprotein C7U63_14315 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_14315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7U63_14320 PF00375 Sodium:dicarboxylate symporter family C7U63_14325 PF03313 Serine dehydratase alpha chain C7U63_14330 PF13309 HTH domain C7U63_14330 PF08348 YheO-like PAS domain C7U63_14340 PF02233 NAD(P) transhydrogenase beta subunit C7U63_14345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C7U63_14345 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C7U63_14345 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C7U63_14350 PF00465 Iron-containing alcohol dehydrogenase C7U63_14355 PF12833 Helix-turn-helix domain C7U63_14355 PF06719 AraC-type transcriptional regulator N-terminus C7U63_14360 PF08212 Lipocalin-like domain C7U63_14365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_14365 PF00672 HAMP domain C7U63_14365 PF02743 Cache domain C7U63_14375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_14375 PF03466 LysR substrate binding domain C7U63_14390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C7U63_14390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C7U63_14395 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C7U63_14395 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C7U63_14400 PF02863 Arginine repressor, C-terminal domain C7U63_14400 PF01316 Arginine repressor, DNA binding domain C7U63_14405 PF03606 C4-dicarboxylate anaerobic carrier C7U63_14410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C7U63_14410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C7U63_14415 PF00696 Amino acid kinase family C7U63_14435 PF04055 Radical SAM superfamily C7U63_14435 PF06969 HemN C-terminal domain C7U63_14445 PF04220 Der GTPase activator (YihI) C7U63_14455 PF00034 Cytochrome c C7U63_14460 PF01926 50S ribosome-binding GTPase C7U63_14470 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C7U63_14470 PF08501 Shikimate dehydrogenase substrate binding domain C7U63_14470 PF01488 Shikimate / quinate 5-dehydrogenase C7U63_14475 PF01218 Coproporphyrinogen III oxidase C7U63_14480 PF01300 Telomere recombination C7U63_14485 PF00731 AIR carboxylase C7U63_14490 PF01396 Topoisomerase DNA binding C4 zinc finger C7U63_14495 PF04361 Protein of unknown function (DUF494) C7U63_14500 PF02481 DNA recombination-mediator protein A C7U63_14500 PF17782 DprA winged helix domain C7U63_14505 PF01476 LysM domain C7U63_14510 PF01327 Polypeptide deformylase C7U63_14515 PF00551 Formyl transferase C7U63_14515 PF02911 Formyl transferase, C-terminal domain C7U63_14520 PF01029 NusB family C7U63_14520 PF01189 16S rRNA methyltransferase RsmB/F C7U63_14525 PF02080 TrkA-C domain C7U63_14525 PF02254 TrkA-N domain C7U63_14530 PF02386 Cation transport protein C7U63_14540 PF03951 Glutamine synthetase, beta-Grasp domain C7U63_14540 PF00120 Glutamine synthetase, catalytic domain C7U63_14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_14550 PF00512 His Kinase A (phospho-acceptor) domain C7U63_14550 PF00989 PAS fold C7U63_14555 PF00158 Sigma-54 interaction domain C7U63_14555 PF02954 Bacterial regulatory protein, Fis family C7U63_14555 PF00072 Response regulator receiver domain C7U63_14560 PF00962 Adenosine/AMP deaminase C7U63_14565 PF02646 RmuC family C7U63_14580 PF02082 Transcriptional regulator C7U63_14585 PF00294 pfkB family carbohydrate kinase C7U63_14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_14590 PF03466 LysR substrate binding domain C7U63_14595 PF00958 GMP synthase C terminal domain C7U63_14595 PF00117 Glutamine amidotransferase class-I C7U63_14595 PF02540 NAD synthase C7U63_14600 PF00171 Aldehyde dehydrogenase family C7U63_14605 PF00202 Aminotransferase class-III C7U63_14610 PF07883 Cupin domain C7U63_14610 PF01381 Helix-turn-helix C7U63_14615 PF00171 Aldehyde dehydrogenase family C7U63_14625 PF00892 EamA-like transporter family C7U63_14630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_14630 PF00672 HAMP domain C7U63_14630 PF12729 Four helix bundle sensory module for signal transduction C7U63_14635 PF04143 Sulphur transport C7U63_14640 PF00691 OmpA family C7U63_14640 PF01389 OmpA-like transmembrane domain C7U63_14645 PF00440 Bacterial regulatory proteins, tetR family C7U63_14655 PF00585 C-terminal regulatory domain of Threonine dehydratase C7U63_14655 PF00291 Pyridoxal-phosphate dependent enzyme C7U63_14660 PF00920 Dehydratase family C7U63_14665 PF01063 Amino-transferase class IV C7U63_14675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7U63_14675 PF00205 Thiamine pyrophosphate enzyme, central domain C7U63_14675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7U63_14685 PF01078 Magnesium chelatase, subunit ChlI C7U63_14685 PF13335 Magnesium chelatase, subunit ChlI C-terminal C7U63_14690 PF01553 Acyltransferase C7U63_14695 PF01553 Acyltransferase C7U63_14700 PF04463 Protein of unknown function (DUF523) C7U63_14710 PF00857 Isochorismatase family C7U63_14715 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C7U63_14715 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C7U63_14720 PF01323 DSBA-like thioredoxin domain C7U63_14725 PF01636 Phosphotransferase enzyme family C7U63_14730 PF12801 4Fe-4S binding domain C7U63_14730 PF13746 4Fe-4S dicluster domain C7U63_14730 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C7U63_14735 PF06288 Protein of unknown function (DUF1040) C7U63_14740 PF00360 Phytochrome region C7U63_14740 PF01590 GAF domain C7U63_14740 PF00563 EAL domain C7U63_14740 PF00990 Diguanylate cyclase, GGDEF domain C7U63_14745 PF13411 MerR HTH family regulatory protein C7U63_14750 PF00403 Heavy-metal-associated domain C7U63_14755 PF00156 Phosphoribosyl transferase domain C7U63_14760 PF03725 3' exoribonuclease family, domain 2 C7U63_14760 PF01138 3' exoribonuclease family, domain 1 C7U63_14765 PF03755 YicC-like family, N-terminal region C7U63_14765 PF08340 Domain of unknown function (DUF1732) C7U63_14770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_14770 PF03466 LysR substrate binding domain C7U63_14775 PF00107 Zinc-binding dehydrogenase C7U63_14775 PF08240 Alcohol dehydrogenase GroES-like domain C7U63_14780 PF00756 Putative esterase C7U63_14795 PF13593 SBF-like CPA transporter family (DUF4137) C7U63_14800 PF13520 Amino acid permease C7U63_14805 PF01588 Putative tRNA binding domain C7U63_14810 PF13520 Amino acid permease C7U63_14815 PF04074 YhcH/YjgK/YiaL C7U63_14820 PF02837 Glycosyl hydrolases family 2, sugar binding domain C7U63_14820 PF02929 Beta galactosidase small chain C7U63_14820 PF16353 Domain of unknown function(DUF4981) C7U63_14820 PF00703 Glycosyl hydrolases family 2 C7U63_14820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C7U63_14825 PF00356 Bacterial regulatory proteins, lacI family C7U63_14860 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_14865 PF00476 DNA polymerase family A C7U63_14865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C7U63_14865 PF01612 3'-5' exonuclease C7U63_14865 PF01367 5'-3' exonuclease, C-terminal SAM fold C7U63_14880 PF06005 Cell division protein ZapB C7U63_14890 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_14890 PF06426 Serine acetyltransferase, N-terminal C7U63_14895 PF16916 Dimerisation domain of Zinc Transporter C7U63_14895 PF01545 Cation efflux family C7U63_14900 PF00486 Transcriptional regulatory protein, C terminal C7U63_14900 PF00072 Response regulator receiver domain C7U63_14905 PF16527 Two-component sensor protein CpxA, periplasmic domain C7U63_14905 PF00672 HAMP domain C7U63_14905 PF00512 His Kinase A (phospho-acceptor) domain C7U63_14905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_14910 PF00588 SpoU rRNA Methylase family C7U63_14915 PF01554 MatE C7U63_14920 PF02630 SCO1/SenC C7U63_14930 PF01726 LexA DNA binding domain C7U63_14930 PF00717 Peptidase S24-like C7U63_14935 PF01553 Acyltransferase C7U63_14940 PF01040 UbiA prenyltransferase family C7U63_14945 PF04345 Chorismate lyase C7U63_14970 PF00107 Zinc-binding dehydrogenase C7U63_14970 PF08240 Alcohol dehydrogenase GroES-like domain C7U63_14975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C7U63_14980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C7U63_14985 PF00535 Glycosyl transferase family 2 C7U63_14990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C7U63_14995 PF01467 Cytidylyltransferase-like C7U63_15000 PF04393 Protein of unknown function (DUF535) C7U63_15005 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C7U63_15005 PF06827 Zinc finger found in FPG and IleRS C7U63_15005 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C7U63_15015 PF00471 Ribosomal protein L33 C7U63_15020 PF00830 Ribosomal L28 family C7U63_15025 PF04002 RadC-like JAB domain C7U63_15030 PF02441 Flavoprotein C7U63_15030 PF04127 DNA / pantothenate metabolism flavoprotein C7U63_15035 PF00692 dUTPase C7U63_15040 PF00440 Bacterial regulatory proteins, tetR family C7U63_15045 PF00924 Mechanosensitive ion channel C7U63_15045 PF05552 Conserved TM helix C7U63_15050 PF00342 Phosphoglucose isomerase C7U63_15055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C7U63_15055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C7U63_15060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_15060 PF03466 LysR substrate binding domain C7U63_15075 PF13607 Succinyl-CoA ligase like flavodoxin domain C7U63_15075 PF13380 CoA binding domain C7U63_15075 PF00583 Acetyltransferase (GNAT) family C7U63_15115 PF01177 Asp/Glu/Hydantoin racemase C7U63_15120 PF07715 TonB-dependent Receptor Plug Domain C7U63_15120 PF00593 TonB dependent receptor C7U63_15125 PF03466 LysR substrate binding domain C7U63_15125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_15140 PF00731 AIR carboxylase C7U63_15145 PF02222 ATP-grasp domain C7U63_15145 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C7U63_15150 PF07690 Major Facilitator Superfamily C7U63_15155 PF00072 Response regulator receiver domain C7U63_15155 PF04397 LytTr DNA-binding domain C7U63_15160 PF07694 5TMR of 5TMR-LYT C7U63_15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_15160 PF06580 Histidine kinase C7U63_15170 PF00210 Ferritin-like domain C7U63_15175 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C7U63_15175 PF07055 Enoyl reductase FAD binding domain C7U63_15175 PF12241 Trans-2-enoyl-CoA reductase catalytic region C7U63_15185 PF00582 Universal stress protein family C7U63_15190 PF00579 tRNA synthetases class I (W and Y) C7U63_15195 PF03466 LysR substrate binding domain C7U63_15195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_15215 PF00892 EamA-like transporter family C7U63_15230 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C7U63_15240 PF00625 Guanylate kinase C7U63_15245 PF01192 RNA polymerase Rpb6 C7U63_15250 PF04607 Region found in RelA / SpoT proteins C7U63_15250 PF02824 TGS domain C7U63_15250 PF13291 ACT domain C7U63_15255 PF00588 SpoU rRNA Methylase family C7U63_15255 PF12105 SpoU, rRNA methylase, C-terminal C7U63_15260 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_15265 PF12146 Serine aminopeptidase, S33 C7U63_15280 PF02954 Bacterial regulatory protein, Fis family C7U63_15280 PF00072 Response regulator receiver domain C7U63_15280 PF14532 Sigma-54 interaction domain C7U63_15285 PF00512 His Kinase A (phospho-acceptor) domain C7U63_15285 PF02743 Cache domain C7U63_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_15295 PF07690 Major Facilitator Superfamily C7U63_15300 PF00224 Pyruvate kinase, barrel domain C7U63_15300 PF02887 Pyruvate kinase, alpha/beta domain C7U63_15330 PF00440 Bacterial regulatory proteins, tetR family C7U63_15335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7U63_15340 PF00873 AcrB/AcrD/AcrF family C7U63_15345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_15345 PF00512 His Kinase A (phospho-acceptor) domain C7U63_15345 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_15350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7U63_15350 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_15360 PF03814 Potassium-transporting ATPase A subunit C7U63_15370 PF02669 K+-transporting ATPase, c chain C7U63_15375 PF02702 Osmosensitive K+ channel His kinase sensor domain C7U63_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_15375 PF13493 Domain of unknown function (DUF4118) C7U63_15375 PF13492 GAF domain C7U63_15375 PF00512 His Kinase A (phospho-acceptor) domain C7U63_15380 PF00072 Response regulator receiver domain C7U63_15380 PF00486 Transcriptional regulatory protein, C terminal C7U63_15385 PF07690 Major Facilitator Superfamily C7U63_15400 PF00155 Aminotransferase class I and II C7U63_15405 PF00011 Hsp20/alpha crystallin family C7U63_15410 PF00011 Hsp20/alpha crystallin family C7U63_15415 PF12706 Beta-lactamase superfamily domain C7U63_15425 PF13280 WYL domain C7U63_15425 PF08279 HTH domain C7U63_15430 PF00561 alpha/beta hydrolase fold C7U63_15440 PF00986 DNA gyrase B subunit, carboxyl terminus C7U63_15440 PF00204 DNA gyrase B C7U63_15440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_15440 PF01751 Toprim domain C7U63_15440 PF18053 DNA gyrase B subunit insert domain C7U63_15445 PF02463 RecF/RecN/SMC N terminal domain C7U63_15450 PF00712 DNA polymerase III beta subunit, N-terminal domain C7U63_15450 PF02768 DNA polymerase III beta subunit, C-terminal domain C7U63_15450 PF02767 DNA polymerase III beta subunit, central domain C7U63_15455 PF08299 Bacterial dnaA protein helix-turn-helix C7U63_15455 PF11638 DnaA N-terminal domain C7U63_15455 PF00308 Bacterial dnaA protein C7U63_15460 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7U63_15465 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_15475 PF00468 Ribosomal protein L34 C7U63_15480 PF00825 Ribonuclease P C7U63_15485 PF01809 Putative membrane protein insertion efficiency factor C7U63_15490 PF14849 YidC periplasmic domain C7U63_15490 PF02096 60Kd inner membrane protein C7U63_15495 PF01926 50S ribosome-binding GTPase C7U63_15495 PF10396 GTP-binding protein TrmE N-terminus C7U63_15495 PF12631 MnmE helical domain C7U63_15500 PF00589 Phage integrase family C7U63_15500 PF02899 Phage integrase, N-terminal SAM-like domain C7U63_15530 PF01420 Type I restriction modification DNA specificity domain C7U63_15535 PF02384 N-6 DNA Methylase C7U63_15535 PF12161 HsdM N-terminal domain C7U63_15540 PF04851 Type III restriction enzyme, res subunit C7U63_15540 PF08463 EcoEI R protein C-terminal C7U63_15540 PF00271 Helicase conserved C-terminal domain C7U63_15540 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C7U63_15565 PF13610 DDE domain C7U63_15585 PF00809 Pterin binding enzyme C7U63_15590 PF00893 Small Multidrug Resistance protein C7U63_15600 PF00186 Dihydrofolate reductase C7U63_15610 PF02909 Tetracyclin repressor-like, C-terminal domain C7U63_15610 PF00440 Bacterial regulatory proteins, tetR family C7U63_15615 PF07690 Major Facilitator Superfamily C7U63_15630 PF02796 Helix-turn-helix domain of resolvase C7U63_15630 PF00239 Resolvase, N terminal domain C7U63_15640 PF13610 DDE domain C7U63_15655 PF13610 DDE domain C7U63_15675 PF00809 Pterin binding enzyme C7U63_15680 PF00893 Small Multidrug Resistance protein C7U63_15695 PF00589 Phage integrase family C7U63_15695 PF13495 Phage integrase, N-terminal SAM-like domain C7U63_15720 PF07804 HipA-like C-terminal domain C7U63_15720 PF13657 HipA N-terminal domain C7U63_15725 PF01032 FecCD transport family C7U63_15730 PF01497 Periplasmic binding protein C7U63_15735 PF00005 ABC transporter C7U63_15740 PF00005 ABC transporter C7U63_15745 PF00593 TonB dependent receptor C7U63_15745 PF07715 TonB-dependent Receptor Plug Domain C7U63_15750 PF00258 Flavodoxin C7U63_15755 PF13932 GidA associated domain C7U63_15755 PF01134 Glucose inhibited division protein A C7U63_15760 PF02527 rRNA small subunit methyltransferase G C7U63_15765 PF13614 AAA domain C7U63_15770 PF17762 HTH domain found in ParB protein C7U63_15770 PF02195 ParB-like nuclease domain C7U63_15780 PF00119 ATP synthase A chain C7U63_15785 PF00137 ATP synthase subunit C C7U63_15790 PF00430 ATP synthase B/B' CF(0) C7U63_15795 PF00213 ATP synthase delta (OSCP) subunit C7U63_15800 PF02874 ATP synthase alpha/beta family, beta-barrel domain C7U63_15800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7U63_15800 PF00306 ATP synthase alpha/beta chain, C terminal domain C7U63_15805 PF00231 ATP synthase C7U63_15810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7U63_15810 PF02874 ATP synthase alpha/beta family, beta-barrel domain C7U63_15815 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C7U63_15815 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C7U63_15820 PF14602 Hexapeptide repeat of succinyl-transferase C7U63_15820 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_15820 PF12804 MobA-like NTP transferase domain C7U63_15825 PF06123 Inner membrane protein CreD C7U63_15835 PF00905 Penicillin binding protein transpeptidase domain C7U63_15840 PF00512 His Kinase A (phospho-acceptor) domain C7U63_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_15840 PF00672 HAMP domain C7U63_15845 PF00486 Transcriptional regulatory protein, C terminal C7U63_15845 PF00072 Response regulator receiver domain C7U63_15850 PF00455 DeoR C terminal sensor domain C7U63_15850 PF08220 DeoR-like helix-turn-helix domain C7U63_15855 PF01380 SIS domain C7U63_15860 PF03472 Autoinducer binding domain C7U63_15860 PF00196 Bacterial regulatory proteins, luxR family C7U63_15870 PF01618 MotA/TolQ/ExbB proton channel family C7U63_15875 PF01618 MotA/TolQ/ExbB proton channel family C7U63_15880 PF02472 Biopolymer transport protein ExbD/TolR C7U63_15885 PF03544 Gram-negative bacterial TonB protein C-terminal C7U63_15920 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C7U63_15925 PF07969 Amidohydrolase family C7U63_15930 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C7U63_15935 PF01209 ubiE/COQ5 methyltransferase family C7U63_15940 PF02036 SCP-2 sterol transfer family C7U63_15945 PF03109 ABC1 family C7U63_15950 PF02416 mttA/Hcf106 family C7U63_15955 PF02416 mttA/Hcf106 family C7U63_15960 PF00902 Sec-independent protein translocase protein (TatC) C7U63_15965 PF01026 TatD related DNase C7U63_15970 PF00490 Delta-aminolevulinic acid dehydratase C7U63_15975 PF18416 N-acetylglucosamine binding protein domain 2 C7U63_15975 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C7U63_15980 PF00704 Glycosyl hydrolases family 18 C7U63_15990 PF01432 Peptidase family M3 C7U63_15995 PF03707 Bacterial signalling protein N terminal repeat C7U63_15995 PF00990 Diguanylate cyclase, GGDEF domain C7U63_15995 PF00563 EAL domain C7U63_16000 PF04445 Putative SAM-dependent methyltransferase C7U63_16010 PF02541 Ppx/GppA phosphatase family C7U63_16015 PF00270 DEAD/DEAH box helicase C7U63_16015 PF00271 Helicase conserved C-terminal domain C7U63_16020 PF00085 Thioredoxin C7U63_16035 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C7U63_16040 PF00175 Oxidoreductase NAD-binding domain C7U63_16045 PF00990 Diguanylate cyclase, GGDEF domain C7U63_16045 PF00563 EAL domain C7U63_16045 PF08447 PAS fold C7U63_16045 PF08448 PAS fold C7U63_16050 PF04380 Membrane fusogenic activity C7U63_16055 PF12262 Bacterial virulence factor lipase N-terminal C7U63_16060 PF01694 Rhomboid family C7U63_16060 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C7U63_16065 PF00581 Rhodanese-like domain C7U63_16070 PF00005 ABC transporter C7U63_16075 PF12399 Branched-chain amino acid ATP-binding cassette transporter C7U63_16075 PF00005 ABC transporter C7U63_16085 PF02653 Branched-chain amino acid transport system / permease component C7U63_16090 PF13458 Periplasmic binding protein C7U63_16095 PF00356 Bacterial regulatory proteins, lacI family C7U63_16110 PF05932 Tir chaperone protein (CesT) family C7U63_16120 PF03545 Yersinia virulence determinant (YopE) C7U63_16120 PF03496 ADP-ribosyltransferase exoenzyme C7U63_16125 PF03707 Bacterial signalling protein N terminal repeat C7U63_16125 PF00990 Diguanylate cyclase, GGDEF domain C7U63_16125 PF00563 EAL domain C7U63_16135 PF05746 DALR anticodon binding domain C7U63_16135 PF02092 Glycyl-tRNA synthetase beta subunit C7U63_16140 PF02091 Glycyl-tRNA synthetase alpha subunit C7U63_16145 PF03352 Methyladenine glycosylase C7U63_16150 PF13488 Glycine zipper C7U63_16150 PF00691 OmpA family C7U63_16160 PF01206 Sulfurtransferase TusA C7U63_16170 PF01547 Bacterial extracellular solute-binding protein C7U63_16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_16175 PF00672 HAMP domain C7U63_16175 PF00512 His Kinase A (phospho-acceptor) domain C7U63_16180 PF00486 Transcriptional regulatory protein, C terminal C7U63_16180 PF00072 Response regulator receiver domain C7U63_16185 PF00108 Thiolase, N-terminal domain C7U63_16185 PF02803 Thiolase, C-terminal domain C7U63_16190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7U63_16190 PF00378 Enoyl-CoA hydratase/isomerase C7U63_16190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7U63_16195 PF13193 AMP-binding enzyme C-terminal domain C7U63_16195 PF00501 AMP-binding enzyme C7U63_16200 PF00557 Metallopeptidase family M24 C7U63_16205 PF09186 Domain of unknown function (DUF1949) C7U63_16205 PF01205 Uncharacterized protein family UPF0029 C7U63_16215 PF12724 Flavodoxin domain C7U63_16245 PF00899 ThiF family C7U63_16250 PF02657 Fe-S metabolism associated domain C7U63_16255 PF00266 Aminotransferase class-V C7U63_16260 PF13361 UvrD-like helicase C-terminal domain C7U63_16260 PF00580 UvrD/REP helicase N-terminal domain C7U63_16265 PF00563 EAL domain C7U63_16265 PF00990 Diguanylate cyclase, GGDEF domain C7U63_16265 PF03707 Bacterial signalling protein N terminal repeat C7U63_16270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C7U63_16280 PF00155 Aminotransferase class I and II C7U63_16285 PF08360 QacR-like protein, C-terminal region C7U63_16285 PF00440 Bacterial regulatory proteins, tetR family C7U63_16290 PF01370 NAD dependent epimerase/dehydratase family C7U63_16295 PF00534 Glycosyl transferases group 1 C7U63_16305 PF04932 O-Antigen ligase C7U63_16310 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C7U63_16340 PF12833 Helix-turn-helix domain C7U63_16340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C7U63_16345 PF01810 LysE type translocator C7U63_16375 PF14001 YdfZ protein C7U63_16390 PF00580 UvrD/REP helicase N-terminal domain C7U63_16390 PF13361 UvrD-like helicase C-terminal domain C7U63_16420 PF02872 5'-nucleotidase, C-terminal domain C7U63_16420 PF00149 Calcineurin-like phosphoesterase C7U63_16430 PF01769 Divalent cation transporter C7U63_16430 PF00571 CBS domain C7U63_16430 PF03448 MgtE intracellular N domain C7U63_16435 PF14824 Sirohaem biosynthesis protein central C7U63_16435 PF10414 Sirohaem synthase dimerisation region C7U63_16435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7U63_16440 PF01226 Formate/nitrite transporter C7U63_16445 PF13806 Rieske-like [2Fe-2S] domain C7U63_16450 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_16450 PF04324 BFD-like [2Fe-2S] binding domain C7U63_16450 PF18267 Rubredoxin NAD+ reductase C-terminal domain C7U63_16450 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7U63_16450 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C7U63_16455 PF00004 ATPase family associated with various cellular activities (AAA) C7U63_16455 PF10431 C-terminal, D2-small domain, of ClpB protein C7U63_16455 PF07724 AAA domain (Cdc48 subfamily) C7U63_16460 PF00227 Proteasome subunit C7U63_16470 PF00750 tRNA synthetases class I (R) C7U63_16470 PF05746 DALR anticodon binding domain C7U63_16470 PF03485 Arginyl tRNA synthetase N terminal domain C7U63_16480 PF04542 Sigma-70 region 2 C7U63_16480 PF04545 Sigma-70, region 4 C7U63_16490 PF02673 Bacitracin resistance protein BacA C7U63_16495 PF01263 Aldose 1-epimerase C7U63_16500 PF00288 GHMP kinases N terminal domain C7U63_16500 PF10509 Galactokinase galactose-binding signature C7U63_16500 PF08544 GHMP kinases C terminal C7U63_16505 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C7U63_16505 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C7U63_16510 PF16363 GDP-mannose 4,6 dehydratase C7U63_16515 PF00356 Bacterial regulatory proteins, lacI family C7U63_16520 PF02837 Glycosyl hydrolases family 2, sugar binding domain C7U63_16520 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C7U63_16520 PF00703 Glycosyl hydrolases family 2 C7U63_16520 PF16353 Domain of unknown function(DUF4981) C7U63_16520 PF02929 Beta galactosidase small chain C7U63_16525 PF13407 Periplasmic binding protein domain C7U63_16530 PF00005 ABC transporter C7U63_16535 PF02653 Branched-chain amino acid transport system / permease component C7U63_16540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_16540 PF00672 HAMP domain C7U63_16540 PF02743 Cache domain C7U63_16545 PF05958 tRNA (Uracil-5-)-methyltransferase C7U63_16560 PF02903 Alpha amylase, N-terminal ig-like domain C7U63_16560 PF00128 Alpha amylase, catalytic domain C7U63_16575 PF00012 Hsp70 protein C7U63_16580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7U63_16580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7U63_16585 PF05981 CreA protein C7U63_16600 PF01258 Prokaryotic dksA/traR C4-type zinc finger C7U63_16605 PF00120 Glutamine synthetase, catalytic domain C7U63_16610 PF00202 Aminotransferase class-III C7U63_16615 PF13416 Bacterial extracellular solute-binding protein C7U63_16625 PF00005 ABC transporter C7U63_16625 PF08402 TOBE domain C7U63_16630 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_16635 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_16640 PF03475 3-alpha domain C7U63_16640 PF03473 MOSC domain C7U63_16655 PF03061 Thioesterase superfamily C7U63_16660 PF00271 Helicase conserved C-terminal domain C7U63_16660 PF09382 RQC domain C7U63_16660 PF00570 HRDC domain C7U63_16660 PF00270 DEAD/DEAH box helicase C7U63_16660 PF16124 RecQ zinc-binding C7U63_16665 PF00034 Cytochrome c C7U63_16670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C7U63_16680 PF02592 Putative vitamin uptake transporter C7U63_16685 PF03737 Aldolase/RraA C7U63_16690 PF00672 HAMP domain C7U63_16690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_16700 PF01197 Ribosomal protein L31 C7U63_16705 PF00270 DEAD/DEAH box helicase C7U63_16705 PF00271 Helicase conserved C-terminal domain C7U63_16705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C7U63_16705 PF17764 3′ DNA-binding domain (3′BD) C7U63_16705 PF18074 Primosomal protein N C-terminal domain C7U63_16715 PF11066 Protein of unknown function (DUF2867) C7U63_16715 PF13460 NAD(P)H-binding C7U63_16720 PF03222 Tryptophan/tyrosine permease family C7U63_16725 PF03949 Malic enzyme, NAD binding domain C7U63_16725 PF00390 Malic enzyme, N-terminal domain C7U63_16730 PF03631 Virulence factor BrkB C7U63_16735 PF02580 D-Tyr-tRNA(Tyr) deacylase C7U63_16740 PF17284 Spermidine synthase tetramerisation domain C7U63_16745 PF00583 Acetyltransferase (GNAT) family C7U63_16745 PF09500 Putative thioesterase (yiiD_Cterm) C7U63_16755 PF00271 Helicase conserved C-terminal domain C7U63_16755 PF17191 RecG wedge domain C7U63_16755 PF00270 DEAD/DEAH box helicase C7U63_16760 PF13091 PLD-like domain C7U63_16765 PF02447 GntP family permease C7U63_16770 PF01202 Shikimate kinase C7U63_16780 PF01081 KDPG and KHG aldolase C7U63_16795 PF01551 Peptidase family M23 C7U63_16800 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C7U63_16800 PF01676 Metalloenzyme superfamily C7U63_16805 PF00581 Rhodanese-like domain C7U63_16810 PF02556 Preprotein translocase subunit SecB C7U63_16815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C7U63_16815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C7U63_16820 PF01521 Iron-sulphur cluster biosynthesis C7U63_16820 PF01106 NifU-like domain C7U63_16825 PF00156 Phosphoribosyl transferase domain C7U63_16830 PF00561 alpha/beta hydrolase fold C7U63_16850 PF16921 Tex protein YqgF-like domain C7U63_16850 PF09371 Tex-like protein N-terminal domain C7U63_16850 PF17674 HHH domain C7U63_16850 PF00575 S1 RNA binding domain C7U63_16855 PF03449 Transcription elongation factor, N-terminal C7U63_16855 PF01272 Transcription elongation factor, GreA/GreB, C-term C7U63_16860 PF00486 Transcriptional regulatory protein, C terminal C7U63_16860 PF00072 Response regulator receiver domain C7U63_16865 PF00512 His Kinase A (phospho-acceptor) domain C7U63_16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_16865 PF00672 HAMP domain C7U63_16875 PF00338 Ribosomal protein S10p/S20e C7U63_16880 PF00297 Ribosomal protein L3 C7U63_16885 PF00573 Ribosomal protein L4/L1 family C7U63_16890 PF00276 Ribosomal protein L23 C7U63_16895 PF00181 Ribosomal Proteins L2, RNA binding domain C7U63_16895 PF03947 Ribosomal Proteins L2, C-terminal domain C7U63_16900 PF00203 Ribosomal protein S19 C7U63_16905 PF00237 Ribosomal protein L22p/L17e C7U63_16910 PF07650 KH domain C7U63_16910 PF00189 Ribosomal protein S3, C-terminal domain C7U63_16915 PF00252 Ribosomal protein L16p/L10e C7U63_16920 PF00831 Ribosomal L29 protein C7U63_16925 PF00366 Ribosomal protein S17 C7U63_16930 PF00238 Ribosomal protein L14p/L23e C7U63_16935 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C7U63_16935 PF00467 KOW motif C7U63_16940 PF00673 ribosomal L5P family C-terminus C7U63_16940 PF00281 Ribosomal protein L5 C7U63_16945 PF00253 Ribosomal protein S14p/S29e C7U63_16950 PF00410 Ribosomal protein S8 C7U63_16955 PF00347 Ribosomal protein L6 C7U63_16960 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C7U63_16965 PF03719 Ribosomal protein S5, C-terminal domain C7U63_16965 PF00333 Ribosomal protein S5, N-terminal domain C7U63_16970 PF00327 Ribosomal protein L30p/L7e C7U63_16975 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C7U63_16980 PF00344 SecY translocase C7U63_16985 PF00444 Ribosomal protein L36 C7U63_16990 PF00416 Ribosomal protein S13/S18 C7U63_16995 PF00411 Ribosomal protein S11 C7U63_17000 PF00163 Ribosomal protein S4/S9 N-terminal domain C7U63_17000 PF01479 S4 domain C7U63_17005 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C7U63_17005 PF01000 RNA polymerase Rpb3/RpoA insert domain C7U63_17005 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C7U63_17010 PF01196 Ribosomal protein L17 C7U63_17045 PF00593 TonB dependent receptor C7U63_17045 PF07715 TonB-dependent Receptor Plug Domain C7U63_17050 PF00990 Diguanylate cyclase, GGDEF domain C7U63_17050 PF17151 Periplasmic sensor domain C7U63_17055 PF00512 His Kinase A (phospho-acceptor) domain C7U63_17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_17055 PF00672 HAMP domain C7U63_17060 PF00486 Transcriptional regulatory protein, C terminal C7U63_17060 PF00072 Response regulator receiver domain C7U63_17070 PF00672 HAMP domain C7U63_17070 PF12729 Four helix bundle sensory module for signal transduction C7U63_17070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_17080 PF03466 LysR substrate binding domain C7U63_17090 PF17954 Quercetinase C-terminal cupin domain C7U63_17090 PF02678 Pirin C7U63_17095 PF07681 DoxX C7U63_17100 PF17946 RecC C-terminal domain C7U63_17105 PF13361 UvrD-like helicase C-terminal domain C7U63_17105 PF12705 PD-(D/E)XK nuclease superfamily C7U63_17105 PF00580 UvrD/REP helicase N-terminal domain C7U63_17110 PF13538 UvrD-like helicase C-terminal domain C7U63_17115 PF05598 Transposase domain (DUF772) C7U63_17115 PF01609 Transposase DDE domain C7U63_17125 PF17151 Periplasmic sensor domain C7U63_17125 PF00990 Diguanylate cyclase, GGDEF domain C7U63_17140 PF07702 UTRA domain C7U63_17140 PF00392 Bacterial regulatory proteins, gntR family C7U63_17155 PF00528 Binding-protein-dependent transport system inner membrane component C7U63_17165 PF08402 TOBE domain C7U63_17165 PF00005 ABC transporter C7U63_17175 PF00990 Diguanylate cyclase, GGDEF domain C7U63_17190 PF13358 DDE superfamily endonuclease C7U63_17190 PF13592 Winged helix-turn helix C7U63_17205 PF01053 Cys/Met metabolism PLP-dependent enzyme C7U63_17215 PF12793 Sugar transport-related sRNA regulator N-term C7U63_17215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_17220 PF00141 Peroxidase C7U63_17235 PF03280 Proteobacterial lipase chaperone protein C7U63_17240 PF00561 alpha/beta hydrolase fold C7U63_17245 PF00579 tRNA synthetases class I (W and Y) C7U63_17245 PF01479 S4 domain C7U63_17250 PF00196 Bacterial regulatory proteins, luxR family C7U63_17270 PF06628 Catalase-related immune-responsive C7U63_17270 PF00199 Catalase C7U63_17275 PF00583 Acetyltransferase (GNAT) family C7U63_17295 PF10458 Valyl tRNA synthetase tRNA binding arm C7U63_17295 PF00133 tRNA synthetases class I (I, L, M and V) C7U63_17295 PF08264 Anticodon-binding domain of tRNA C7U63_17300 PF04364 DNA polymerase III chi subunit, HolC C7U63_17305 PF00883 Cytosol aminopeptidase family, catalytic domain C7U63_17305 PF02789 Cytosol aminopeptidase family, N-terminal domain C7U63_17310 PF03739 Lipopolysaccharide export system permease LptF/LptG C7U63_17315 PF03739 Lipopolysaccharide export system permease LptF/LptG C7U63_17330 PF00589 Phage integrase family C7U63_17330 PF13356 Arm DNA-binding domain C7U63_17395 PF00593 TonB dependent receptor C7U63_17395 PF07715 TonB-dependent Receptor Plug Domain C7U63_17405 PF00768 D-alanyl-D-alanine carboxypeptidase C7U63_17410 PF13520 Amino acid permease C7U63_17430 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C7U63_17445 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C7U63_17450 PF02602 Uroporphyrinogen-III synthase HemD C7U63_17455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C7U63_17455 PF03900 Porphobilinogen deaminase, C-terminal domain C7U63_17460 PF01295 Adenylate cyclase, class-I C7U63_17460 PF12633 Adenylate cyclase NT domain C7U63_17465 PF02230 Phospholipase/Carboxylesterase C7U63_17470 PF01491 Frataxin-like domain C7U63_17480 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C7U63_17480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C7U63_17485 PF01678 Diaminopimelate epimerase C7U63_17495 PF02899 Phage integrase, N-terminal SAM-like domain C7U63_17495 PF00589 Phage integrase family C7U63_17500 PF13419 Haloacid dehalogenase-like hydrolase C7U63_17510 PF13545 Crp-like helix-turn-helix domain C7U63_17510 PF00027 Cyclic nucleotide-binding domain C7U63_17520 PF07722 Peptidase C26 C7U63_17525 PF04751 Protein of unknown function (DUF615) C7U63_17530 PF01523 Putative modulator of DNA gyrase C7U63_17535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C7U63_17540 PF01722 BolA-like protein C7U63_17550 PF05494 MlaC protein C7U63_17555 PF02470 MlaD protein C7U63_17560 PF02405 Permease MlaE C7U63_17565 PF00005 ABC transporter C7U63_17570 PF00571 CBS domain C7U63_17570 PF01380 SIS domain C7U63_17580 PF06835 Lipopolysaccharide-assembly, LptC-related C7U63_17585 PF03968 OstA-like protein C7U63_17590 PF00005 ABC transporter C7U63_17590 PF12399 Branched-chain amino acid ATP-binding cassette transporter C7U63_17595 PF04552 Sigma-54, DNA binding domain C7U63_17595 PF04963 Sigma-54 factor, core binding domain C7U63_17595 PF00309 Sigma-54 factor, Activator interacting domain (AID) C7U63_17600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C7U63_17605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7U63_17610 PF03668 P-loop ATPase protein family C7U63_17615 PF00381 PTS HPr component phosphorylation site C7U63_17620 PF00874 PRD domain C7U63_17620 PF05043 Mga helix-turn-helix domain C7U63_17620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7U63_17620 PF08279 HTH domain C7U63_17625 PF07071 KDGP aldolase C7U63_17630 PF03841 L-seryl-tRNA selenium transferase C7U63_17635 PF01979 Amidohydrolase family C7U63_17665 PF13180 PDZ domain C7U63_17670 PF00595 PDZ domain C7U63_17670 PF13180 PDZ domain C7U63_17680 PF03969 AFG1-like ATPase C7U63_17685 PF00572 Ribosomal protein L13 C7U63_17690 PF00380 Ribosomal protein S9/S16 C7U63_17695 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C7U63_17695 PF00355 Rieske [2Fe-2S] domain C7U63_17700 PF00032 Cytochrome b(C-terminal)/b6/petD C7U63_17700 PF00033 Cytochrome b/b6/petB C7U63_17705 PF02167 Cytochrome C1 family C7U63_17710 PF00043 Glutathione S-transferase, C-terminal domain C7U63_17710 PF02798 Glutathione S-transferase, N-terminal domain C7U63_17715 PF04386 Stringent starvation protein B C7U63_17720 PF04972 BON domain C7U63_17725 PF13580 SIS domain C7U63_17730 PF02021 Uncharacterised protein family UPF0102 C7U63_17735 PF04348 LppC putative lipoprotein C7U63_17740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7U63_17755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C7U63_17760 PF00813 FliP family C7U63_17765 PF01313 Bacterial export proteins, family 3 C7U63_17770 PF01311 Bacterial export proteins, family 1 C7U63_17775 PF01312 FlhB HrpN YscU SpaS Family C7U63_17780 PF00771 FHIPEP family C7U63_17785 PF00072 Response regulator receiver domain C7U63_17785 PF00158 Sigma-54 interaction domain C7U63_17785 PF02954 Bacterial regulatory protein, Fis family C7U63_17790 PF02049 Flagellar hook-basal body complex protein FliE C7U63_17795 PF01514 Secretory protein of YscJ/FliF family C7U63_17795 PF08345 Flagellar M-ring protein C-terminal C7U63_17800 PF14841 FliG middle domain C7U63_17800 PF01706 FliG C-terminal domain C7U63_17800 PF14842 FliG N-terminal domain C7U63_17810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7U63_17810 PF18269 T3SS EscN ATPase C-terminal domain C7U63_17835 PF00460 Flagella basal body rod protein C7U63_17840 PF00460 Flagella basal body rod protein C7U63_17840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_17845 PF03963 Flagellar hook capping protein - N-terminal region C7U63_17845 PF13861 FlgD Tudor-like domain C7U63_17845 PF13860 FlgD Ig-like domain C7U63_17850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_17850 PF07559 Flagellar basal body protein FlaE C7U63_17850 PF00460 Flagella basal body rod protein C7U63_17855 PF00460 Flagella basal body rod protein C7U63_17855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_17860 PF00460 Flagella basal body rod protein C7U63_17860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_17865 PF02107 Flagellar L-ring protein C7U63_17870 PF02119 Flagellar P-ring protein C7U63_17880 PF00460 Flagella basal body rod protein C7U63_17880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7U63_17885 PF00669 Bacterial flagellin N-terminal helical region C7U63_17895 PF00700 Bacterial flagellin C-terminal helical region C7U63_17895 PF00669 Bacterial flagellin N-terminal helical region C7U63_17900 PF07195 Flagellar hook-associated protein 2 C-terminus C7U63_17900 PF07196 Flagellin hook IN motif C7U63_17900 PF02465 Flagellar hook-associated protein 2 N-terminus C7U63_17905 PF02561 Flagellar protein FliS C7U63_17925 PF04545 Sigma-70, region 4 C7U63_17925 PF04542 Sigma-70 region 2 C7U63_17930 PF01618 MotA/TolQ/ExbB proton channel family C7U63_17935 PF13677 Membrane MotB of proton-channel complex MotA/MotB C7U63_17935 PF00691 OmpA family C7U63_17945 PF01464 Transglycosylase SLT domain C7U63_17945 PF01476 LysM domain C7U63_17955 PF02381 MraZ protein, putative antitoxin-like C7U63_17960 PF01795 MraW methylase family C7U63_17965 PF04999 Cell division protein FtsL C7U63_17970 PF00905 Penicillin binding protein transpeptidase domain C7U63_17970 PF03717 Penicillin-binding Protein dimerisation domain C7U63_17975 PF08245 Mur ligase middle domain C7U63_17975 PF01225 Mur ligase family, catalytic domain C7U63_17975 PF02875 Mur ligase family, glutamate ligase domain C7U63_17980 PF08245 Mur ligase middle domain C7U63_17980 PF02875 Mur ligase family, glutamate ligase domain C7U63_17980 PF01225 Mur ligase family, catalytic domain C7U63_17985 PF00953 Glycosyl transferase family 4 C7U63_17985 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C7U63_17990 PF02875 Mur ligase family, glutamate ligase domain C7U63_17990 PF08245 Mur ligase middle domain C7U63_17995 PF01098 Cell cycle protein C7U63_18000 PF04101 Glycosyltransferase family 28 C-terminal domain C7U63_18000 PF03033 Glycosyltransferase family 28 N-terminal domain C7U63_18005 PF01225 Mur ligase family, catalytic domain C7U63_18005 PF02875 Mur ligase family, glutamate ligase domain C7U63_18005 PF08245 Mur ligase middle domain C7U63_18010 PF08478 POTRA domain, FtsQ-type C7U63_18010 PF03799 Cell division protein FtsQ C7U63_18015 PF02491 SHS2 domain inserted in FTSA C7U63_18020 PF00091 Tubulin/FtsZ family, GTPase domain C7U63_18020 PF12327 FtsZ family, C-terminal domain C7U63_18025 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C7U63_18035 PF07516 SecA Wing and Scaffold domain C7U63_18035 PF07517 SecA DEAD-like domain C7U63_18035 PF01043 SecA preprotein cross-linking domain C7U63_18035 PF02810 SEC-C motif C7U63_18040 PF00293 NUDIX domain C7U63_18045 PF03884 DNA gyrase inhibitor YacG C7U63_18050 PF07072 Cell division protein C7U63_18055 PF01121 Dephospho-CoA kinase C7U63_18060 PF06750 Bacterial Peptidase A24 N-terminal domain C7U63_18060 PF01478 Type IV leader peptidase family C7U63_18065 PF00482 Type II secretion system (T2SS), protein F C7U63_18070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C7U63_18070 PF00437 Type II/IV secretion system protein C7U63_18075 PF07963 Prokaryotic N-terminal methylation motif C7U63_18085 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C7U63_18085 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C7U63_18095 PF01510 N-acetylmuramoyl-L-alanine amidase C7U63_18100 PF00392 Bacterial regulatory proteins, gntR family C7U63_18100 PF07729 FCD domain C7U63_18105 PF00456 Transketolase, thiamine diphosphate binding domain C7U63_18105 PF17831 Pyruvate dehydrogenase E1 component middle domain C7U63_18110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7U63_18110 PF00364 Biotin-requiring enzyme C7U63_18110 PF02817 e3 binding domain C7U63_18115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7U63_18115 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7U63_18120 PF00563 EAL domain C7U63_18120 PF03707 Bacterial signalling protein N terminal repeat C7U63_18120 PF00990 Diguanylate cyclase, GGDEF domain C7U63_18125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_18125 PF12729 Four helix bundle sensory module for signal transduction C7U63_18125 PF00672 HAMP domain C7U63_18130 PF01734 Patatin-like phospholipase C7U63_18135 PF00330 Aconitase family (aconitate hydratase) C7U63_18135 PF06434 Aconitate hydratase 2 N-terminus C7U63_18135 PF11791 Aconitate B N-terminal domain C7U63_18140 PF12792 CSS motif domain associated with EAL C7U63_18140 PF00563 EAL domain C7U63_18150 PF07683 Cobalamin synthesis protein cobW C-terminal domain C7U63_18150 PF02492 CobW/HypB/UreG, nucleotide-binding domain C7U63_18170 PF07690 Major Facilitator Superfamily C7U63_18180 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C7U63_18185 PF02152 Dihydroneopterin aldolase C7U63_18190 PF02660 Glycerol-3-phosphate acyltransferase C7U63_18245 PF14698 Argininosuccinate lyase C-terminal C7U63_18245 PF00206 Lyase C7U63_18250 PF00764 Arginosuccinate synthase C7U63_18255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C7U63_18255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C7U63_18260 PF00696 Amino acid kinase family C7U63_18265 PF02774 Semialdehyde dehydrogenase, dimerisation domain C7U63_18265 PF01118 Semialdehyde dehydrogenase, NAD binding domain C7U63_18270 PF01546 Peptidase family M20/M25/M40 C7U63_18270 PF07687 Peptidase dimerisation domain C7U63_18275 PF00311 Phosphoenolpyruvate carboxylase C7U63_18285 PF04073 Aminoacyl-tRNA editing domain C7U63_18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_18300 PF03466 LysR substrate binding domain C7U63_18305 PF03788 LrgA family C7U63_18310 PF04172 LrgB-like family C7U63_18320 PF01734 Patatin-like phospholipase C7U63_18325 PF00488 MutS domain V C7U63_18325 PF05190 MutS family domain IV C7U63_18325 PF05192 MutS domain III C7U63_18325 PF05188 MutS domain II C7U63_18325 PF01624 MutS domain I C7U63_18330 PF02464 Competence-damaged protein C7U63_18335 PF00154 recA bacterial DNA recombination protein C7U63_18340 PF02631 RecX family C7U63_18345 PF02272 DHHA1 domain C7U63_18345 PF01411 tRNA synthetases class II (A) C7U63_18345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C7U63_18350 PF00696 Amino acid kinase family C7U63_18350 PF13840 ACT domain C7U63_18350 PF01842 ACT domain C7U63_18355 PF02599 Global regulator protein family C7U63_18390 PF00768 D-alanyl-D-alanine carboxypeptidase C7U63_18395 PF09335 SNARE associated Golgi protein C7U63_18400 PF00571 CBS domain C7U63_18400 PF03471 Transporter associated domain C7U63_18400 PF01595 Cyclin M transmembrane N-terminal domain C7U63_18405 PF00710 Asparaginase, N-terminal C7U63_18405 PF17763 Glutaminase/Asparaginase C-terminal domain C7U63_18420 PF00356 Bacterial regulatory proteins, lacI family C7U63_18425 PF02378 Phosphotransferase system, EIIC C7U63_18425 PF00367 phosphotransferase system, EIIB C7U63_18430 PF00128 Alpha amylase, catalytic domain C7U63_18430 PF11941 Domain of unknown function (DUF3459) C7U63_18435 PF14602 Hexapeptide repeat of succinyl-transferase C7U63_18435 PF12464 Maltose acetyltransferase C7U63_18445 PF00849 RNA pseudouridylate synthase C7U63_18450 PF12137 RNA polymerase recycling family C-terminal C7U63_18450 PF18337 RapA N-terminal Tudor like domain C7U63_18450 PF18339 RapA N-terminal Tudor like domain 1 C7U63_18450 PF00271 Helicase conserved C-terminal domain C7U63_18450 PF00176 SNF2 family N-terminal domain C7U63_18480 PF04363 Protein of unknown function (DUF496) C7U63_18500 PF00994 Probable molybdopterin binding domain C7U63_18500 PF02464 Competence-damaged protein C7U63_18510 PF04204 Homoserine O-succinyltransferase C7U63_18520 PF01037 Lrp/AsnC ligand binding domain C7U63_18525 PF00884 Sulfatase C7U63_18540 PF16657 Maltogenic Amylase, C-terminal domain C7U63_18540 PF02903 Alpha amylase, N-terminal ig-like domain C7U63_18540 PF00128 Alpha amylase, catalytic domain C7U63_18560 PF00106 short chain dehydrogenase C7U63_18565 PF03577 Peptidase family C69 C7U63_18575 PF00465 Iron-containing alcohol dehydrogenase C7U63_18580 PF02142 MGS-like domain C7U63_18590 PF00210 Ferritin-like domain C7U63_18605 PF08351 Domain of unknown function (DUF1726) C7U63_18605 PF05127 Helicase C7U63_18605 PF13718 GNAT acetyltransferase 2 C7U63_18605 PF17176 tRNA-binding domain C7U63_18615 PF01584 CheW-like domain C7U63_18615 PF00072 Response regulator receiver domain C7U63_18630 PF02698 DUF218 domain C7U63_18635 PF01752 Collagenase C7U63_18635 PF08453 Peptidase family M9 N-terminal C7U63_18640 PF00501 AMP-binding enzyme C7U63_18645 PF13378 Enolase C-terminal domain-like C7U63_18650 PF00378 Enoyl-CoA hydratase/isomerase C7U63_18655 PF12697 Alpha/beta hydrolase family C7U63_18660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7U63_18660 PF16582 Middle domain of thiamine pyrophosphate C7U63_18660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7U63_18665 PF00425 chorismate binding enzyme C7U63_18670 PF01040 UbiA prenyltransferase family C7U63_18690 PF00270 DEAD/DEAH box helicase C7U63_18690 PF00271 Helicase conserved C-terminal domain C7U63_18690 PF03880 DbpA RNA binding domain C7U63_18695 PF07662 Na+ dependent nucleoside transporter C-terminus C7U63_18695 PF07670 Nucleoside recognition C7U63_18695 PF01773 Na+ dependent nucleoside transporter N-terminus C7U63_18700 PF04307 LexA-binding, inner membrane-associated putative hydrolase C7U63_18705 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C7U63_18710 PF01544 CorA-like Mg2+ transporter protein C7U63_18725 PF00226 DnaJ domain C7U63_18725 PF00684 DnaJ central domain C7U63_18725 PF01556 DnaJ C terminal domain C7U63_18735 PF05068 Mannitol repressor C7U63_18740 PF08125 Mannitol dehydrogenase C-terminal domain C7U63_18740 PF01232 Mannitol dehydrogenase Rossmann domain C7U63_18745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7U63_18745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7U63_18745 PF02378 Phosphotransferase system, EIIC C7U63_18750 PF03279 Bacterial lipid A biosynthesis acyltransferase C7U63_18755 PF00294 pfkB family carbohydrate kinase C7U63_18755 PF01467 Cytidylyltransferase-like C7U63_18760 PF02321 Outer membrane efflux protein C7U63_18765 PF00293 NUDIX domain C7U63_18770 PF06853 Protein of unknown function (DUF1249) C7U63_18775 PF00149 Calcineurin-like phosphoesterase C7U63_18780 PF05728 Uncharacterised protein family (UPF0227) C7U63_18785 PF01751 Toprim domain C7U63_18785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_18785 PF00986 DNA gyrase B subunit, carboxyl terminus C7U63_18785 PF00204 DNA gyrase B C7U63_18790 PF03989 DNA gyrase C-terminal domain, beta-propeller C7U63_18790 PF00521 DNA gyrase/topoisomerase IV, subunit A C7U63_18800 PF00854 POT family C7U63_18820 PF00684 DnaJ central domain C7U63_18820 PF01556 DnaJ C terminal domain C7U63_18820 PF00226 DnaJ domain C7U63_18835 PF03466 LysR substrate binding domain C7U63_18835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_18840 PF00578 AhpC/TSA family C7U63_18860 PF01553 Acyltransferase C7U63_18865 PF04012 PspA/IM30 family C7U63_18880 PF01541 GIY-YIG catalytic domain C7U63_18890 PF00892 EamA-like transporter family C7U63_18895 PF03167 Uracil DNA glycosylase superfamily C7U63_18900 PF00892 EamA-like transporter family C7U63_18905 PF03466 LysR substrate binding domain C7U63_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_18910 PF00950 ABC 3 transport family C7U63_18915 PF00005 ABC transporter C7U63_18920 PF01297 Zinc-uptake complex component A periplasmic C7U63_18940 PF01476 LysM domain C7U63_18940 PF08525 Opacity-associated protein A N-terminal motif C7U63_18940 PF01551 Peptidase family M23 C7U63_18945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7U63_18950 PF04222 Protein of unknown function (DUF416) C7U63_18965 PF02028 BCCT, betaine/carnitine/choline family transporter C7U63_18970 PF01966 HD domain C7U63_18970 PF01743 Poly A polymerase head domain C7U63_18970 PF12627 Probable RNA and SrmB- binding site of polymerase A C7U63_18975 PF10576 Iron-sulfur binding domain of endonuclease III C7U63_18975 PF00633 Helix-hairpin-helix motif C7U63_18975 PF00730 HhH-GPD superfamily base excision DNA repair protein C7U63_18975 PF14815 NUDIX domain C7U63_18980 PF04362 Bacterial Fe(2+) trafficking C7U63_18985 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C7U63_18985 PF01464 Transglycosylase SLT domain C7U63_18990 PF04076 Bacterial OB fold (BOF) protein C7U63_18995 PF00657 GDSL-like Lipase/Acylhydrolase C7U63_19000 PF01389 OmpA-like transmembrane domain C7U63_19000 PF00691 OmpA family C7U63_19005 PF00990 Diguanylate cyclase, GGDEF domain C7U63_19010 PF00575 S1 RNA binding domain C7U63_19010 PF00773 RNB domain C7U63_19010 PF08206 Ribonuclease B OB domain C7U63_19010 PF08461 Ribonuclease R winged-helix domain C7U63_19010 PF17876 Cold shock domain C7U63_19015 PF08032 RNA 2'-O ribose methyltransferase substrate binding C7U63_19015 PF00588 SpoU rRNA Methylase family C7U63_19025 PF13673 Acetyltransferase (GNAT) domain C7U63_19030 PF00270 DEAD/DEAH box helicase C7U63_19030 PF00271 Helicase conserved C-terminal domain C7U63_19035 PF05175 Methyltransferase small domain C7U63_19040 PF05525 Branched-chain amino acid transport protein C7U63_19045 PF05525 Branched-chain amino acid transport protein C7U63_19060 PF01475 Ferric uptake regulator family C7U63_19065 PF01207 Dihydrouridine synthase (Dus) C7U63_19070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_19070 PF08447 PAS fold C7U63_19080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7U63_19090 PF00132 Bacterial transferase hexapeptide (six repeats) C7U63_19095 PF10952 Protein of unknown function (DUF2753) C7U63_19100 PF00378 Enoyl-CoA hydratase/isomerase C7U63_19115 PF00106 short chain dehydrogenase C7U63_19120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7U63_19120 PF03129 Anticodon binding domain C7U63_19120 PF04073 Aminoacyl-tRNA editing domain C7U63_19125 PF05958 tRNA (Uracil-5-)-methyltransferase C7U63_19125 PF01938 TRAM domain C7U63_19130 PF02610 L-arabinose isomerase C7U63_19130 PF11762 L-arabinose isomerase C-terminal domain C7U63_19135 PF00596 Class II Aldolase and Adducin N-terminal domain C7U63_19140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7U63_19145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C7U63_19150 PF00005 ABC transporter C7U63_19155 PF02653 Branched-chain amino acid transport system / permease component C7U63_19160 PF02311 AraC-like ligand binding domain C7U63_19160 PF12833 Helix-turn-helix domain C7U63_19170 PF02470 MlaD protein C7U63_19175 PF04403 Paraquat-inducible protein A C7U63_19180 PF17209 Hfq protein C7U63_19185 PF13419 Haloacid dehalogenase-like hydrolase C7U63_19195 PF00360 Phytochrome region C7U63_19195 PF01590 GAF domain C7U63_19195 PF00563 EAL domain C7U63_19195 PF00990 Diguanylate cyclase, GGDEF domain C7U63_19200 PF08206 Ribonuclease B OB domain C7U63_19200 PF17876 Cold shock domain C7U63_19200 PF00773 RNB domain C7U63_19205 PF03466 LysR substrate binding domain C7U63_19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_19210 PF00765 Autoinducer synthase C7U63_19215 PF00196 Bacterial regulatory proteins, luxR family C7U63_19215 PF03472 Autoinducer binding domain C7U63_19220 PF01810 LysE type translocator C7U63_19225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_19225 PF00672 HAMP domain C7U63_19230 PF01330 RuvA N terminal domain C7U63_19230 PF07499 RuvA, C-terminal domain C7U63_19235 PF17864 RuvB AAA lid domain C7U63_19235 PF05491 RuvB C-terminal winged helix domain C7U63_19235 PF05496 Holliday junction DNA helicase RuvB P-loop domain C7U63_19240 PF01654 Cytochrome bd terminal oxidase subunit I C7U63_19245 PF02322 Cytochrome bd terminal oxidase subunit II C7U63_19250 PF08173 Membrane bound YbgT-like protein C7U63_19255 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C7U63_19260 PF03061 Thioesterase superfamily C7U63_19265 PF01618 MotA/TolQ/ExbB proton channel family C7U63_19270 PF02472 Biopolymer transport protein ExbD/TolR C7U63_19280 PF07676 WD40-like Beta Propeller Repeat C7U63_19280 PF04052 TolB amino-terminal domain C7U63_19285 PF00691 OmpA family C7U63_19290 PF16331 TolA binding protein trimerisation C7U63_19290 PF13174 Tetratricopeptide repeat C7U63_19355 PF00209 Sodium:neurotransmitter symporter family C7U63_19365 PF00209 Sodium:neurotransmitter symporter family C7U63_19385 PF07690 Major Facilitator Superfamily C7U63_19395 PF01037 Lrp/AsnC ligand binding domain C7U63_19410 PF00293 NUDIX domain C7U63_19410 PF13344 Haloacid dehalogenase-like hydrolase C7U63_19420 PF01641 SelR domain C7U63_19425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C7U63_19425 PF00128 Alpha amylase, catalytic domain C7U63_19430 PF00128 Alpha amylase, catalytic domain C7U63_19430 PF02806 Alpha amylase, C-terminal all-beta domain C7U63_19430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C7U63_19435 PF02446 4-alpha-glucanotransferase C7U63_19445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C7U63_19445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7U63_19450 PF01263 Aldose 1-epimerase C7U63_19455 PF02445 Quinolinate synthetase A protein C7U63_19460 PF00672 HAMP domain C7U63_19460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_19465 PF01957 NfeD-like C-terminal, partner-binding C7U63_19470 PF16200 C-terminal region of band_7 C7U63_19470 PF01145 SPFH domain / Band 7 family C7U63_19475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7U63_19475 PF14824 Sirohaem biosynthesis protein central C7U63_19475 PF10414 Sirohaem synthase dimerisation region C7U63_19480 PF01507 Phosphoadenosine phosphosulfate reductase family C7U63_19485 PF00009 Elongation factor Tu GTP binding domain C7U63_19490 PF02080 TrkA-C domain C7U63_19490 PF03600 Citrate transporter C7U63_19510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_19510 PF08447 PAS fold C7U63_19530 PF00005 ABC transporter C7U63_19545 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C7U63_19560 PF00719 Inorganic pyrophosphatase C7U63_19565 PF11849 Domain of unknown function (DUF3369) C7U63_19575 PF00893 Small Multidrug Resistance protein C7U63_19580 PF00893 Small Multidrug Resistance protein C7U63_19585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7U63_19590 PF00912 Transglycosylase C7U63_19590 PF14814 Bifunctional transglycosylase second domain C7U63_19590 PF00905 Penicillin binding protein transpeptidase domain C7U63_19595 PF08482 ATP-dependent helicase C-terminal C7U63_19595 PF00271 Helicase conserved C-terminal domain C7U63_19595 PF00270 DEAD/DEAH box helicase C7U63_19595 PF04408 Helicase associated domain (HA2) C7U63_19605 PF17746 SfsA N-terminal OB domain C7U63_19605 PF03749 Sugar fermentation stimulation protein RE domain C7U63_19610 PF01258 Prokaryotic dksA/traR C4-type zinc finger C7U63_19615 PF00749 tRNA synthetases class I (E and Q), catalytic domain C7U63_19620 PF12627 Probable RNA and SrmB- binding site of polymerase A C7U63_19620 PF12626 Polymerase A arginine-rich C-terminus C7U63_19620 PF01743 Poly A polymerase head domain C7U63_19625 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C7U63_19630 PF02548 Ketopantoate hydroxymethyltransferase C7U63_19635 PF02569 Pantoate-beta-alanine ligase C7U63_19660 PF01869 BadF/BadG/BcrA/BcrD ATPase family C7U63_19665 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C7U63_19670 PF01061 ABC-2 type transporter C7U63_19675 PF00005 ABC transporter C7U63_19680 PF00156 Phosphoribosyl transferase domain C7U63_19685 PF00440 Bacterial regulatory proteins, tetR family C7U63_19690 PF02441 Flavoprotein C7U63_19695 PF02875 Mur ligase family, glutamate ligase domain C7U63_19695 PF08245 Mur ligase middle domain C7U63_19695 PF01225 Mur ligase family, catalytic domain C7U63_19700 PF01569 PAP2 superfamily C7U63_19705 PF16363 GDP-mannose 4,6 dehydratase C7U63_19710 PF00970 Oxidoreductase FAD-binding domain C7U63_19710 PF00111 2Fe-2S iron-sulfur cluster binding domain C7U63_19710 PF00175 Oxidoreductase NAD-binding domain C7U63_19715 PF03063 Prismane/CO dehydrogenase family C7U63_19720 PF00210 Ferritin-like domain C7U63_19725 PF01510 N-acetylmuramoyl-L-alanine amidase C7U63_19730 PF07308 Protein of unknown function (DUF1456) C7U63_19735 PF00672 HAMP domain C7U63_19735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_19735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C7U63_19735 PF01627 Hpt domain C7U63_19735 PF00072 Response regulator receiver domain C7U63_19735 PF00512 His Kinase A (phospho-acceptor) domain C7U63_19740 PF01938 TRAM domain C7U63_19740 PF05958 tRNA (Uracil-5-)-methyltransferase C7U63_19745 PF02824 TGS domain C7U63_19745 PF04607 Region found in RelA / SpoT proteins C7U63_19745 PF13291 ACT domain C7U63_19750 PF03819 MazG nucleotide pyrophosphohydrolase domain C7U63_19755 PF00117 Glutamine amidotransferase class-I C7U63_19755 PF06418 CTP synthase N-terminus C7U63_19760 PF03952 Enolase, N-terminal domain C7U63_19760 PF00113 Enolase, C-terminal TIM barrel domain C7U63_19810 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C7U63_19820 PF00005 ABC transporter C7U63_19820 PF12848 ABC transporter C7U63_19840 PF00392 Bacterial regulatory proteins, gntR family C7U63_19840 PF00155 Aminotransferase class I and II C7U63_19850 PF01810 LysE type translocator C7U63_19855 PF01177 Asp/Glu/Hydantoin racemase C7U63_19865 PF04074 YhcH/YjgK/YiaL C7U63_19870 PF00871 Acetokinase family C7U63_19875 PF00924 Mechanosensitive ion channel C7U63_19880 PF17969 L,D-transpeptidase C-terminal domain C7U63_19880 PF03734 L,D-transpeptidase catalytic domain C7U63_19890 PF00474 Sodium:solute symporter family C7U63_19895 PF04977 Septum formation initiator C7U63_19900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C7U63_19905 PF02542 YgbB family C7U63_19910 PF01142 tRNA pseudouridine synthase D (TruD) C7U63_19915 PF01975 Survival protein SurE C7U63_19925 PF09335 SNARE associated Golgi protein C7U63_19930 PF01476 LysM domain C7U63_19930 PF01551 Peptidase family M23 C7U63_19935 PF04539 Sigma-70 region 3 C7U63_19935 PF04545 Sigma-70, region 4 C7U63_19935 PF00140 Sigma-70 factor, region 1.2 C7U63_19935 PF04542 Sigma-70 region 2 C7U63_19940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7U63_19950 PF03466 LysR substrate binding domain C7U63_19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_19955 PF04371 Porphyromonas-type peptidyl-arginine deiminase C7U63_19960 PF01425 Amidase C7U63_19970 PF00753 Metallo-beta-lactamase superfamily C7U63_19980 PF00270 DEAD/DEAH box helicase C7U63_19980 PF00271 Helicase conserved C-terminal domain C7U63_19985 PF00990 Diguanylate cyclase, GGDEF domain C7U63_19995 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C7U63_20005 PF00445 Ribonuclease T2 family C7U63_20015 PF03060 Nitronate monooxygenase C7U63_20040 PF00293 NUDIX domain C7U63_20040 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C7U63_20040 PF09297 NADH pyrophosphatase zinc ribbon domain C7U63_20050 PF00512 His Kinase A (phospho-acceptor) domain C7U63_20050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_20055 PF00072 Response regulator receiver domain C7U63_20055 PF00486 Transcriptional regulatory protein, C terminal C7U63_20075 PF08335 GlnD PII-uridylyltransferase C7U63_20075 PF03710 Glutamate-ammonia ligase adenylyltransferase C7U63_20085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_20085 PF00672 HAMP domain C7U63_20090 PF00027 Cyclic nucleotide-binding domain C7U63_20090 PF00520 Ion transport protein C7U63_20095 PF08239 Bacterial SH3 domain C7U63_20105 PF00171 Aldehyde dehydrogenase family C7U63_20105 PF01619 Proline dehydrogenase C7U63_20105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C7U63_20105 PF14850 DNA-binding domain of Proline dehydrogenase C7U63_20110 PF00293 NUDIX domain C7U63_20110 PF09297 NADH pyrophosphatase zinc ribbon domain C7U63_20115 PF01208 Uroporphyrinogen decarboxylase (URO-D) C7U63_20120 PF00480 ROK family C7U63_20125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7U63_20125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C7U63_20130 PF00162 Phosphoglycerate kinase C7U63_20135 PF01116 Fructose-bisphosphate aldolase class-II C7U63_20140 PF01266 FAD dependent oxidoreductase C7U63_20160 PF02683 Cytochrome C biogenesis protein transmembrane region C7U63_20160 PF11412 Disulphide bond corrector protein DsbC C7U63_20165 PF03091 CutA1 divalent ion tolerance protein C7U63_20180 PF03466 LysR substrate binding domain C7U63_20180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_20185 PF01571 Aminomethyltransferase folate-binding domain C7U63_20190 PF03937 Flavinator of succinate dehydrogenase C7U63_20200 PF00890 FAD binding domain C7U63_20200 PF02910 Fumarate reductase flavoprotein C-term C7U63_20205 PF04542 Sigma-70 region 2 C7U63_20205 PF08281 Sigma-70, region 4 C7U63_20210 PF03872 Anti sigma-E protein RseA, N-terminal domain C7U63_20210 PF03873 Anti sigma-E protein RseA, C-terminal domain C7U63_20215 PF03888 MucB/RseB N-terminal domain C7U63_20215 PF17188 MucB/RseB C-terminal domain C7U63_20225 PF03144 Elongation factor Tu domain 2 C7U63_20225 PF06421 GTP-binding protein LepA C-terminus C7U63_20225 PF00009 Elongation factor Tu GTP binding domain C7U63_20225 PF00679 Elongation factor G C-terminus C7U63_20230 PF10502 Signal peptidase, peptidase S26 C7U63_20235 PF00035 Double-stranded RNA binding motif C7U63_20235 PF14622 Ribonuclease-III-like C7U63_20240 PF01926 50S ribosome-binding GTPase C7U63_20240 PF07650 KH domain C7U63_20245 PF11967 Recombination protein O N terminal C7U63_20245 PF02565 Recombination protein O C terminal C7U63_20250 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C7U63_20255 PF00459 Inositol monophosphatase family C7U63_20260 PF03795 YCII-related domain C7U63_20265 PF04279 Intracellular septation protein A C7U63_20270 PF00282 Pyridoxal-dependent decarboxylase conserved domain C7U63_20275 PF03006 Haemolysin-III related C7U63_20280 PF06826 Predicted Permease Membrane Region C7U63_20280 PF02080 TrkA-C domain C7U63_20295 PF03707 Bacterial signalling protein N terminal repeat C7U63_20295 PF00990 Diguanylate cyclase, GGDEF domain C7U63_20295 PF00563 EAL domain C7U63_20300 PF06877 Regulator of ribonuclease activity B C7U63_20320 PF00561 alpha/beta hydrolase fold C7U63_20325 PF00194 Eukaryotic-type carbonic anhydrase C7U63_20330 PF04227 Indigoidine synthase A like protein C7U63_20335 PF00294 pfkB family carbohydrate kinase C7U63_20350 PF00582 Universal stress protein family C7U63_20360 PF00267 Gram-negative porin C7U63_20365 PF08241 Methyltransferase domain C7U63_20370 PF13545 Crp-like helix-turn-helix domain C7U63_20370 PF00027 Cyclic nucleotide-binding domain C7U63_20375 PF02566 OsmC-like protein C7U63_20390 PF00485 Phosphoribulokinase / Uridine kinase family C7U63_20395 PF06794 Uncharacterised protein family (UPF0270) C7U63_20400 PF00563 EAL domain C7U63_20400 PF00360 Phytochrome region C7U63_20400 PF00990 Diguanylate cyclase, GGDEF domain C7U63_20400 PF01590 GAF domain C7U63_20405 PF00561 alpha/beta hydrolase fold C7U63_20410 PF01584 CheW-like domain C7U63_20410 PF00072 Response regulator receiver domain C7U63_20420 PF09526 Probable metal-binding protein (DUF2387) C7U63_20425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7U63_20430 PF04102 SlyX C7U63_20440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7U63_20440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C7U63_20445 PF02954 Bacterial regulatory protein, Fis family C7U63_20445 PF00158 Sigma-54 interaction domain C7U63_20445 PF00072 Response regulator receiver domain C7U63_20465 PF02872 5'-nucleotidase, C-terminal domain C7U63_20465 PF00149 Calcineurin-like phosphoesterase C7U63_20480 PF00772 DnaB-like helicase N terminal domain C7U63_20480 PF03796 DnaB-like helicase C terminal domain C7U63_20485 PF01168 Alanine racemase, N-terminal domain C7U63_20485 PF00842 Alanine racemase, C-terminal domain C7U63_20490 PF01894 Uncharacterised protein family UPF0047 C7U63_20495 PF03575 Peptidase family S51 C7U63_20505 PF00005 ABC transporter C7U63_20510 PF01032 FecCD transport family C7U63_20520 PF06228 Haem utilisation ChuX/HutX C7U63_20525 PF01243 Pyridoxamine 5'-phosphate oxidase C7U63_20545 PF00593 TonB dependent receptor C7U63_20545 PF07715 TonB-dependent Receptor Plug Domain C7U63_20550 PF12832 MFS_1 like family C7U63_20560 PF13443 Cro/C1-type HTH DNA-binding domain C7U63_20575 PF08329 Chitinase A, N-terminal domain C7U63_20575 PF00704 Glycosyl hydrolases family 18 C7U63_20585 PF08329 Chitinase A, N-terminal domain C7U63_20585 PF00704 Glycosyl hydrolases family 18 C7U63_20590 PF17945 Beta/Gamma crystallin C7U63_20590 PF12561 ToxR activated gene A lipoprotein domain C7U63_20595 PF18416 N-acetylglucosamine binding protein domain 2 C7U63_20595 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C7U63_20635 PF06483 Chitinase C C7U63_20635 PF00704 Glycosyl hydrolases family 18 C7U63_20640 PF01584 CheW-like domain C7U63_20640 PF00072 Response regulator receiver domain C7U63_20645 PF13472 GDSL-like Lipase/Acylhydrolase family C7U63_20650 PF00005 ABC transporter C7U63_20660 PF08338 Domain of unknown function (DUF1731) C7U63_20660 PF01370 NAD dependent epimerase/dehydratase family C7U63_20665 PF00563 EAL domain C7U63_20665 PF12792 CSS motif domain associated with EAL C7U63_20670 PF00155 Aminotransferase class I and II C7U63_20675 PF02390 Putative methyltransferase C7U63_20680 PF04320 Protein with unknown function (DUF469) C7U63_20685 PF04960 Glutaminase C7U63_20690 PF00581 Rhodanese-like domain C7U63_20695 PF06004 Bacterial protein of unknown function (DUF903) C7U63_20705 PF00994 Probable molybdopterin binding domain C7U63_20715 PF06738 Putative threonine/serine exporter C7U63_20720 PF12821 Threonine/Serine exporter, ThrE C7U63_20725 PF00186 Dihydrofolate reductase C7U63_20730 PF01507 Phosphoadenosine phosphosulfate reductase family C7U63_20735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7U63_20735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C7U63_20740 PF00175 Oxidoreductase NAD-binding domain C7U63_20740 PF00667 FAD binding domain C7U63_20740 PF00258 Flavodoxin C7U63_20745 PF00152 tRNA synthetases class II (D, K and N) C7U63_20745 PF01336 OB-fold nucleic acid binding domain C7U63_20755 PF02743 Cache domain C7U63_20755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_20755 PF00672 HAMP domain C7U63_20760 PF03616 Sodium/glutamate symporter C7U63_20765 PF17763 Glutaminase/Asparaginase C-terminal domain C7U63_20765 PF00710 Asparaginase, N-terminal C7U63_20770 PF07023 Protein of unknown function (DUF1315) C7U63_20775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C7U63_20775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7U63_20790 PF04055 Radical SAM superfamily C7U63_20790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C7U63_20795 PF03099 Biotin/lipoate A/B protein ligase family C7U63_20800 PF04359 Protein of unknown function (DUF493) C7U63_20805 PF00768 D-alanyl-D-alanine carboxypeptidase C7U63_20805 PF07943 Penicillin-binding protein 5, C-terminal domain C7U63_20810 PF03330 Lytic transglycolase C7U63_20810 PF05036 Sporulation related domain C7U63_20815 PF13406 Transglycosylase SLT domain C7U63_20820 PF01098 Cell cycle protein C7U63_20825 PF03717 Penicillin-binding Protein dimerisation domain C7U63_20825 PF00905 Penicillin binding protein transpeptidase domain C7U63_20830 PF02590 Predicted SPOUT methyltransferase C7U63_20840 PF01467 Cytidylyltransferase-like C7U63_20855 PF13603 Leucyl-tRNA synthetase, Domain 2 C7U63_20855 PF00133 tRNA synthetases class I (I, L, M and V) C7U63_20855 PF08264 Anticodon-binding domain of tRNA C7U63_20860 PF07295 Zinc-ribbon containing domain C7U63_20865 PF01523 Putative modulator of DNA gyrase C7U63_20870 PF01523 Putative modulator of DNA gyrase C7U63_20875 PF00258 Flavodoxin C7U63_20880 PF02899 Phage integrase, N-terminal SAM-like domain C7U63_20880 PF00589 Phage integrase family C7U63_20885 PF01741 Large-conductance mechanosensitive channel, MscL C7U63_20895 PF17768 RecJ OB domain C7U63_20895 PF01368 DHH family C7U63_20895 PF02272 DHHA1 domain C7U63_20900 PF13411 MerR HTH family regulatory protein C7U63_20905 PF00795 Carbon-nitrogen hydrolase C7U63_20910 PF03471 Transporter associated domain C7U63_20910 PF00571 CBS domain C7U63_20915 PF02130 Uncharacterized protein family UPF0054 C7U63_20920 PF02562 PhoH-like protein C7U63_20925 PF01938 TRAM domain C7U63_20925 PF00919 Uncharacterized protein family UPF0004 C7U63_20925 PF04055 Radical SAM superfamily C7U63_20930 PF01494 FAD binding domain C7U63_20940 PF00313 'Cold-shock' DNA-binding domain C7U63_20945 PF05230 MASE2 domain C7U63_20945 PF00990 Diguanylate cyclase, GGDEF domain C7U63_20950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_20950 PF03466 LysR substrate binding domain C7U63_20960 PF13419 Haloacid dehalogenase-like hydrolase C7U63_20975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7U63_20975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7U63_20985 PF08207 Elongation factor P (EF-P) KOW-like domain C7U63_20985 PF09285 Elongation factor P, C-terminal C7U63_20985 PF01132 Elongation factor P (EF-P) OB domain C7U63_20995 PF00478 IMP dehydrogenase / GMP reductase domain C7U63_21015 PF00512 His Kinase A (phospho-acceptor) domain C7U63_21015 PF08521 Two-component sensor kinase N-terminal C7U63_21015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7U63_21020 PF00072 Response regulator receiver domain C7U63_21020 PF00486 Transcriptional regulatory protein, C terminal C7U63_21030 PF00106 short chain dehydrogenase C7U63_21040 PF00501 AMP-binding enzyme C7U63_21055 PF01266 FAD dependent oxidoreductase C7U63_21065 PF17932 Tetracyclin repressor-like, C-terminal domain C7U63_21065 PF00440 Bacterial regulatory proteins, tetR family C7U63_21070 PF06224 Winged helix DNA-binding domain C7U63_21080 PF01546 Peptidase family M20/M25/M40 C7U63_21080 PF07687 Peptidase dimerisation domain C7U63_21085 PF07670 Nucleoside recognition C7U63_21090 PF07670 Nucleoside recognition C7U63_21095 PF02313 Fumarate reductase subunit D C7U63_21100 PF02300 Fumarate reductase subunit C C7U63_21105 PF13183 4Fe-4S dicluster domain C7U63_21105 PF13085 2Fe-2S iron-sulfur cluster binding domain C7U63_21110 PF00890 FAD binding domain C7U63_21110 PF02910 Fumarate reductase flavoprotein C-term C7U63_21115 PF02743 Cache domain C7U63_21115 PF00672 HAMP domain C7U63_21115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_21120 PF03009 Glycerophosphoryl diester phosphodiesterase family C7U63_21125 PF12794 Mechanosensitive ion channel inner membrane domain 1 C7U63_21125 PF00924 Mechanosensitive ion channel C7U63_21125 PF12795 Mechanosensitive ion channel porin domain C7U63_21135 PF01476 LysM domain C7U63_21135 PF08525 Opacity-associated protein A N-terminal motif C7U63_21135 PF01551 Peptidase family M23 C7U63_21145 PF03466 LysR substrate binding domain C7U63_21145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_21160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_21160 PF02743 Cache domain C7U63_21160 PF00672 HAMP domain C7U63_21165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_21165 PF03466 LysR substrate binding domain C7U63_21175 PF17092 Penicillin-binding protein OB-like domain C7U63_21175 PF00905 Penicillin binding protein transpeptidase domain C7U63_21175 PF00912 Transglycosylase C7U63_21200 PF03958 Bacterial type II/III secretion system short domain C7U63_21200 PF07660 Secretin and TonB N terminus short domain C7U63_21200 PF00263 Bacterial type II and III secretion system protein C7U63_21200 PF11741 AMIN domain C7U63_21205 PF01202 Shikimate kinase C7U63_21210 PF01761 3-dehydroquinate synthase C7U63_21220 PF02086 D12 class N6 adenine-specific DNA methyltransferase C7U63_21230 PF00834 Ribulose-phosphate 3 epimerase family C7U63_21235 PF13419 Haloacid dehalogenase-like hydrolase C7U63_21240 PF00579 tRNA synthetases class I (W and Y) C7U63_21250 PF00117 Glutamine amidotransferase class-I C7U63_21255 PF00202 Aminotransferase class-III C7U63_21260 PF04958 Arginine N-succinyltransferase beta subunit C7U63_21265 PF00171 Aldehyde dehydrogenase family C7U63_21280 PF13419 Haloacid dehalogenase-like hydrolase C7U63_21285 PF07690 Major Facilitator Superfamily C7U63_21290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7U63_21290 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C7U63_21290 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C7U63_21290 PF10371 Domain of unknown function C7U63_21290 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C7U63_21295 PF00128 Alpha amylase, catalytic domain C7U63_21295 PF16657 Maltogenic Amylase, C-terminal domain C7U63_21305 PF00012 Hsp70 protein C7U63_21320 PF07859 alpha/beta hydrolase fold C7U63_21335 PF01048 Phosphorylase superfamily C7U63_21340 PF04973 Nicotinamide mononucleotide transporter C7U63_21345 PF02080 TrkA-C domain C7U63_21345 PF03600 Citrate transporter C7U63_21390 PF06071 Protein of unknown function (DUF933) C7U63_21390 PF01926 50S ribosome-binding GTPase C7U63_21395 PF01195 Peptidyl-tRNA hydrolase C7U63_21400 PF00149 Calcineurin-like phosphoesterase C7U63_21400 PF02872 5'-nucleotidase, C-terminal domain C7U63_21405 PF14572 Phosphoribosyl synthetase-associated domain C7U63_21405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C7U63_21415 PF00288 GHMP kinases N terminal domain C7U63_21415 PF08544 GHMP kinases C terminal C7U63_21420 PF03550 Outer membrane lipoprotein LolB C7U63_21425 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C7U63_21425 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C7U63_21425 PF01488 Shikimate / quinate 5-dehydrogenase C7U63_21430 PF03462 PCRF domain C7U63_21430 PF00472 RF-1 domain C7U63_21435 PF17827 PrmC N-terminal domain C7U63_21435 PF13847 Methyltransferase domain C7U63_21445 PF13369 Transglutaminase-like superfamily C7U63_21450 PF00793 DAHP synthetase I family C7U63_21455 PF00375 Sodium:dicarboxylate symporter family C7U63_21460 PF01228 Glycine radical C7U63_21470 PF03167 Uracil DNA glycosylase superfamily C7U63_21485 PF01161 Phosphatidylethanolamine-binding protein C7U63_21505 PF00155 Aminotransferase class I and II C7U63_21510 PF07690 Major Facilitator Superfamily C7U63_21515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7U63_21515 PF03466 LysR substrate binding domain C7U63_21520 PF00106 short chain dehydrogenase C7U63_21525 PF01343 Peptidase family S49 C7U63_21525 PF08496 Peptidase family S49 N-terminal C7U63_21530 PF07690 Major Facilitator Superfamily C7U63_21535 PF00990 Diguanylate cyclase, GGDEF domain C7U63_21540 PF02635 DsrE/DsrF-like family C7U63_21555 PF12838 4Fe-4S dicluster domain C7U63_21565 PF00004 ATPase family associated with various cellular activities (AAA) C7U63_21590 PF00816 H-NS histone family C7U63_21615 PF01219 Prokaryotic diacylglycerol kinase C7U63_21620 PF08019 Phosphoethanolamine transferase EptA/EptB C7U63_21620 PF00884 Sulfatase C7U63_21625 PF00884 Sulfatase C7U63_21625 PF08019 Phosphoethanolamine transferase EptA/EptB C7U63_21640 PF00672 HAMP domain C7U63_21640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7U63_21675 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C7U63_21675 PF18766 SWI2/SNF2 ATPase C7U63_21675 PF12008 Type I restriction and modification enzyme - subunit R C terminal C7U63_21685 PF01420 Type I restriction modification DNA specificity domain C7U63_21690 PF02384 N-6 DNA Methylase C7U63_21690 PF12161 HsdM N-terminal domain C7U63_21705 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C7U63_21710 PF00717 Peptidase S24-like C7U63_21715 PF00817 impB/mucB/samB family C7U63_21715 PF11799 impB/mucB/samB family C-terminal domain C7U63_21715 PF13438 Domain of unknown function (DUF4113) C7U63_21800 PF04996 Succinylarginine dihydrolase C7U63_21815 PF01555 DNA methylase C7U63_21820 PF09571 XcyI restriction endonuclease