locus-tag class description J6598_00005 PF00308 Bacterial dnaA protein J6598_00005 PF08299 Bacterial dnaA protein helix-turn-helix J6598_00005 PF11638 DnaA N-terminal domain J6598_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J6598_00010 PF02767 DNA polymerase III beta subunit, central domain J6598_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J6598_00015 PF02463 RecF/RecN/SMC N terminal domain J6598_00020 PF00204 DNA gyrase B J6598_00020 PF00986 DNA gyrase B subunit, carboxyl terminus J6598_00020 PF18053 DNA gyrase B subunit insert domain J6598_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_00020 PF01751 Toprim domain J6598_00025 PF13006 Insertion element 4 transposase N-terminal J6598_00025 PF01609 Transposase DDE domain J6598_00035 PF08279 HTH domain J6598_00035 PF13280 WYL domain J6598_00040 PF01965 DJ-1/PfpI family J6598_00040 PF12833 Helix-turn-helix domain J6598_00045 PF12706 Beta-lactamase superfamily domain J6598_00050 PF00011 Hsp20/alpha crystallin family J6598_00055 PF00011 Hsp20/alpha crystallin family J6598_00060 PF00155 Aminotransferase class I and II J6598_00075 PF07690 Major Facilitator Superfamily J6598_00080 PF00486 Transcriptional regulatory protein, C terminal J6598_00080 PF00072 Response regulator receiver domain J6598_00085 PF00512 His Kinase A (phospho-acceptor) domain J6598_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_00085 PF13492 GAF domain J6598_00085 PF02702 Osmosensitive K+ channel His kinase sensor domain J6598_00085 PF13493 Domain of unknown function (DUF4118) J6598_00090 PF02669 K+-transporting ATPase, c chain J6598_00100 PF03814 Potassium-transporting ATPase A subunit J6598_00105 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_00105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6598_00110 PF00512 His Kinase A (phospho-acceptor) domain J6598_00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_00110 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_00115 PF00873 AcrB/AcrD/AcrF family J6598_00120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_00125 PF00440 Bacterial regulatory proteins, tetR family J6598_00160 PF12146 Serine aminopeptidase, S33 J6598_00165 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_00170 PF00588 SpoU rRNA Methylase family J6598_00170 PF12105 SpoU, rRNA methylase, C-terminal J6598_00175 PF02824 TGS domain J6598_00175 PF13291 ACT domain J6598_00175 PF04607 Region found in RelA / SpoT proteins J6598_00180 PF01192 RNA polymerase Rpb6 J6598_00185 PF00625 Guanylate kinase J6598_00190 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J6598_00205 PF00892 EamA-like transporter family J6598_00225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_00225 PF03466 LysR substrate binding domain J6598_00230 PF00579 tRNA synthetases class I (W and Y) J6598_00235 PF00582 Universal stress protein family J6598_00240 PF07055 Enoyl reductase FAD binding domain J6598_00240 PF12241 Trans-2-enoyl-CoA reductase catalytic region J6598_00240 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J6598_00245 PF00210 Ferritin-like domain J6598_00255 PF07694 5TMR of 5TMR-LYT J6598_00255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_00255 PF06580 Histidine kinase J6598_00260 PF00072 Response regulator receiver domain J6598_00260 PF04397 LytTr DNA-binding domain J6598_00265 PF07690 Major Facilitator Superfamily J6598_00270 PF02222 ATP-grasp domain J6598_00270 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J6598_00275 PF00731 AIR carboxylase J6598_00290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_00290 PF03466 LysR substrate binding domain J6598_00295 PF00593 TonB dependent receptor J6598_00295 PF07715 TonB-dependent Receptor Plug Domain J6598_00300 PF01177 Asp/Glu/Hydantoin racemase J6598_00330 PF00899 ThiF family J6598_00335 PF02657 Fe-S metabolism associated domain J6598_00340 PF00266 Aminotransferase class-V J6598_00345 PF00580 UvrD/REP helicase N-terminal domain J6598_00345 PF13361 UvrD-like helicase C-terminal domain J6598_00350 PF03707 Bacterial signalling protein N terminal repeat J6598_00350 PF00563 EAL domain J6598_00350 PF00990 Diguanylate cyclase, GGDEF domain J6598_00355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J6598_00360 PF08240 Alcohol dehydrogenase GroES-like domain J6598_00360 PF00107 Zinc-binding dehydrogenase J6598_00365 PF00155 Aminotransferase class I and II J6598_00370 PF00440 Bacterial regulatory proteins, tetR family J6598_00370 PF08360 QacR-like protein, C-terminal region J6598_00375 PF01370 NAD dependent epimerase/dehydratase family J6598_00380 PF00534 Glycosyl transferases group 1 J6598_00380 PF13439 Glycosyltransferase Family 4 J6598_00385 PF04932 O-Antigen ligase J6598_00420 PF12833 Helix-turn-helix domain J6598_00420 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J6598_00425 PF01810 LysE type translocator J6598_00455 PF14001 YdfZ protein J6598_00465 PF13361 UvrD-like helicase C-terminal domain J6598_00465 PF00580 UvrD/REP helicase N-terminal domain J6598_00470 PF02608 ABC transporter substrate-binding protein PnrA-like J6598_00475 PF00005 ABC transporter J6598_00480 PF02653 Branched-chain amino acid transport system / permease component J6598_00485 PF02653 Branched-chain amino acid transport system / permease component J6598_00490 PF00149 Calcineurin-like phosphoesterase J6598_00490 PF02872 5'-nucleotidase, C-terminal domain J6598_00500 PF00571 CBS domain J6598_00500 PF01769 Divalent cation transporter J6598_00500 PF03448 MgtE intracellular N domain J6598_00505 PF10414 Sirohaem synthase dimerisation region J6598_00505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6598_00505 PF14824 Sirohaem biosynthesis protein central J6598_00510 PF01226 Formate/nitrite transporter J6598_00515 PF13806 Rieske-like [2Fe-2S] domain J6598_00520 PF18267 Rubredoxin NAD+ reductase C-terminal domain J6598_00520 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_00520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6598_00520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6598_00520 PF04324 BFD-like [2Fe-2S] binding domain J6598_00525 PF10431 C-terminal, D2-small domain, of ClpB protein J6598_00525 PF07724 AAA domain (Cdc48 subfamily) J6598_00525 PF00004 ATPase family associated with various cellular activities (AAA) J6598_00530 PF00227 Proteasome subunit J6598_00540 PF03485 Arginyl tRNA synthetase N terminal domain J6598_00540 PF05746 DALR anticodon binding domain J6598_00540 PF00750 tRNA synthetases class I (R) J6598_00550 PF04542 Sigma-70 region 2 J6598_00550 PF04545 Sigma-70, region 4 J6598_00560 PF02673 Bacitracin resistance protein BacA J6598_00565 PF01263 Aldose 1-epimerase J6598_00570 PF00288 GHMP kinases N terminal domain J6598_00570 PF10509 Galactokinase galactose-binding signature J6598_00570 PF08544 GHMP kinases C terminal J6598_00575 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J6598_00575 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J6598_00580 PF16363 GDP-mannose 4,6 dehydratase J6598_00585 PF00356 Bacterial regulatory proteins, lacI family J6598_00590 PF02837 Glycosyl hydrolases family 2, sugar binding domain J6598_00590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J6598_00590 PF00703 Glycosyl hydrolases family 2 J6598_00590 PF16353 Domain of unknown function(DUF4981) J6598_00590 PF02929 Beta galactosidase small chain J6598_00595 PF13407 Periplasmic binding protein domain J6598_00600 PF00005 ABC transporter J6598_00605 PF02653 Branched-chain amino acid transport system / permease component J6598_00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_00610 PF00672 HAMP domain J6598_00610 PF02743 Cache domain J6598_00615 PF05958 tRNA (Uracil-5-)-methyltransferase J6598_00630 PF00128 Alpha amylase, catalytic domain J6598_00630 PF02903 Alpha amylase, N-terminal ig-like domain J6598_00645 PF00012 Hsp70 protein J6598_00650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6598_00650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6598_00655 PF05981 CreA protein J6598_00670 PF01258 Prokaryotic dksA/traR C4-type zinc finger J6598_00675 PF00120 Glutamine synthetase, catalytic domain J6598_00680 PF00202 Aminotransferase class-III J6598_00685 PF13416 Bacterial extracellular solute-binding protein J6598_00690 PF13416 Bacterial extracellular solute-binding protein J6598_00695 PF00005 ABC transporter J6598_00695 PF08402 TOBE domain J6598_00700 PF00528 Binding-protein-dependent transport system inner membrane component J6598_00705 PF00528 Binding-protein-dependent transport system inner membrane component J6598_00710 PF03475 3-alpha domain J6598_00710 PF03473 MOSC domain J6598_00725 PF03061 Thioesterase superfamily J6598_00730 PF00270 DEAD/DEAH box helicase J6598_00730 PF09382 RQC domain J6598_00730 PF00271 Helicase conserved C-terminal domain J6598_00730 PF00570 HRDC domain J6598_00730 PF16124 RecQ zinc-binding J6598_00735 PF00034 Cytochrome c J6598_00740 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J6598_00750 PF02592 Putative vitamin uptake transporter J6598_00755 PF03737 Aldolase/RraA J6598_00760 PF00672 HAMP domain J6598_00760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_00770 PF01197 Ribosomal protein L31 J6598_00775 PF17764 3′ DNA-binding domain (3′BD) J6598_00775 PF18074 Primosomal protein N C-terminal domain J6598_00775 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J6598_00775 PF00270 DEAD/DEAH box helicase J6598_00775 PF00271 Helicase conserved C-terminal domain J6598_00785 PF11066 Protein of unknown function (DUF2867) J6598_00785 PF13460 NAD(P)H-binding J6598_00790 PF03222 Tryptophan/tyrosine permease family J6598_00795 PF03949 Malic enzyme, NAD binding domain J6598_00795 PF00390 Malic enzyme, N-terminal domain J6598_00800 PF03631 Virulence factor BrkB J6598_00805 PF02580 D-Tyr-tRNA(Tyr) deacylase J6598_00810 PF17284 Spermidine synthase tetramerisation domain J6598_00815 PF00583 Acetyltransferase (GNAT) family J6598_00815 PF09500 Putative thioesterase (yiiD_Cterm) J6598_00825 PF00270 DEAD/DEAH box helicase J6598_00825 PF00271 Helicase conserved C-terminal domain J6598_00825 PF17191 RecG wedge domain J6598_00830 PF13091 PLD-like domain J6598_00835 PF02447 GntP family permease J6598_00840 PF01202 Shikimate kinase J6598_00845 PF00920 Dehydratase family J6598_00850 PF01081 KDPG and KHG aldolase J6598_00855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J6598_00855 PF00356 Bacterial regulatory proteins, lacI family J6598_00865 PF01551 Peptidase family M23 J6598_00870 PF01676 Metalloenzyme superfamily J6598_00870 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J6598_00875 PF00581 Rhodanese-like domain J6598_00880 PF02556 Preprotein translocase subunit SecB J6598_00885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J6598_00885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J6598_00890 PF01106 NifU-like domain J6598_00890 PF01521 Iron-sulphur cluster biosynthesis J6598_00895 PF00156 Phosphoribosyl transferase domain J6598_00900 PF00561 alpha/beta hydrolase fold J6598_00920 PF16921 Tex protein YqgF-like domain J6598_00920 PF17674 HHH domain J6598_00920 PF00575 S1 RNA binding domain J6598_00920 PF09371 Tex-like protein N-terminal domain J6598_00925 PF03449 Transcription elongation factor, N-terminal J6598_00925 PF01272 Transcription elongation factor, GreA/GreB, C-term J6598_00930 PF00072 Response regulator receiver domain J6598_00930 PF00486 Transcriptional regulatory protein, C terminal J6598_00935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_00935 PF00512 His Kinase A (phospho-acceptor) domain J6598_00935 PF00672 HAMP domain J6598_00945 PF00338 Ribosomal protein S10p/S20e J6598_00950 PF00297 Ribosomal protein L3 J6598_00955 PF00573 Ribosomal protein L4/L1 family J6598_00960 PF00276 Ribosomal protein L23 J6598_00965 PF00181 Ribosomal Proteins L2, RNA binding domain J6598_00965 PF03947 Ribosomal Proteins L2, C-terminal domain J6598_00970 PF00203 Ribosomal protein S19 J6598_00975 PF00237 Ribosomal protein L22p/L17e J6598_00980 PF07650 KH domain J6598_00980 PF00189 Ribosomal protein S3, C-terminal domain J6598_00985 PF00252 Ribosomal protein L16p/L10e J6598_00990 PF00831 Ribosomal L29 protein J6598_00995 PF00366 Ribosomal protein S17 J6598_01000 PF00238 Ribosomal protein L14p/L23e J6598_01005 PF00467 KOW motif J6598_01005 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J6598_01010 PF00281 Ribosomal protein L5 J6598_01010 PF00673 ribosomal L5P family C-terminus J6598_01015 PF00253 Ribosomal protein S14p/S29e J6598_01020 PF00410 Ribosomal protein S8 J6598_01025 PF00347 Ribosomal protein L6 J6598_01030 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J6598_01035 PF00333 Ribosomal protein S5, N-terminal domain J6598_01035 PF03719 Ribosomal protein S5, C-terminal domain J6598_01040 PF00327 Ribosomal protein L30p/L7e J6598_01045 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J6598_01050 PF00344 SecY translocase J6598_01055 PF00444 Ribosomal protein L36 J6598_01060 PF00416 Ribosomal protein S13/S18 J6598_01065 PF00411 Ribosomal protein S11 J6598_01070 PF01479 S4 domain J6598_01070 PF00163 Ribosomal protein S4/S9 N-terminal domain J6598_01075 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J6598_01075 PF01000 RNA polymerase Rpb3/RpoA insert domain J6598_01075 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J6598_01080 PF01196 Ribosomal protein L17 J6598_01120 PF07715 TonB-dependent Receptor Plug Domain J6598_01120 PF00593 TonB dependent receptor J6598_01125 PF00990 Diguanylate cyclase, GGDEF domain J6598_01125 PF17151 Periplasmic sensor domain J6598_01130 PF00512 His Kinase A (phospho-acceptor) domain J6598_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_01130 PF00672 HAMP domain J6598_01135 PF00072 Response regulator receiver domain J6598_01135 PF00486 Transcriptional regulatory protein, C terminal J6598_01145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_01145 PF00672 HAMP domain J6598_01145 PF12729 Four helix bundle sensory module for signal transduction J6598_01155 PF03466 LysR substrate binding domain J6598_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_01165 PF02678 Pirin J6598_01165 PF17954 Quercetinase C-terminal cupin domain J6598_01170 PF07681 DoxX J6598_01175 PF17946 RecC C-terminal domain J6598_01180 PF13361 UvrD-like helicase C-terminal domain J6598_01180 PF00580 UvrD/REP helicase N-terminal domain J6598_01180 PF12705 PD-(D/E)XK nuclease superfamily J6598_01185 PF13538 UvrD-like helicase C-terminal domain J6598_01195 PF00990 Diguanylate cyclase, GGDEF domain J6598_01215 PF07702 UTRA domain J6598_01215 PF00392 Bacterial regulatory proteins, gntR family J6598_01230 PF00528 Binding-protein-dependent transport system inner membrane component J6598_01240 PF00005 ABC transporter J6598_01240 PF08402 TOBE domain J6598_01250 PF00990 Diguanylate cyclase, GGDEF domain J6598_01270 PF01053 Cys/Met metabolism PLP-dependent enzyme J6598_01280 PF12793 Sugar transport-related sRNA regulator N-term J6598_01280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_01285 PF00141 Peroxidase J6598_01300 PF03280 Proteobacterial lipase chaperone protein J6598_01305 PF00561 alpha/beta hydrolase fold J6598_01310 PF00579 tRNA synthetases class I (W and Y) J6598_01310 PF01479 S4 domain J6598_01315 PF00196 Bacterial regulatory proteins, luxR family J6598_01335 PF04229 GrpB protein J6598_01335 PF13673 Acetyltransferase (GNAT) domain J6598_01340 PF00199 Catalase J6598_01340 PF06628 Catalase-related immune-responsive J6598_01345 PF00583 Acetyltransferase (GNAT) family J6598_01365 PF10458 Valyl tRNA synthetase tRNA binding arm J6598_01365 PF00133 tRNA synthetases class I (I, L, M and V) J6598_01365 PF08264 Anticodon-binding domain of tRNA J6598_01370 PF04364 DNA polymerase III chi subunit, HolC J6598_01375 PF00883 Cytosol aminopeptidase family, catalytic domain J6598_01375 PF02789 Cytosol aminopeptidase family, N-terminal domain J6598_01380 PF03739 Lipopolysaccharide export system permease LptF/LptG J6598_01385 PF03739 Lipopolysaccharide export system permease LptF/LptG J6598_01405 PF00593 TonB dependent receptor J6598_01405 PF07715 TonB-dependent Receptor Plug Domain J6598_01415 PF00768 D-alanyl-D-alanine carboxypeptidase J6598_01420 PF13520 Amino acid permease J6598_01440 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J6598_01455 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase J6598_01460 PF02602 Uroporphyrinogen-III synthase HemD J6598_01465 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J6598_01465 PF03900 Porphobilinogen deaminase, C-terminal domain J6598_01470 PF01295 Adenylate cyclase, class-I J6598_01470 PF12633 Adenylate cyclase NT domain J6598_01475 PF02230 Phospholipase/Carboxylesterase J6598_01480 PF01491 Frataxin-like domain J6598_01490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J6598_01490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J6598_01495 PF01678 Diaminopimelate epimerase J6598_01505 PF00589 Phage integrase family J6598_01505 PF02899 Phage integrase, N-terminal SAM-like domain J6598_01510 PF13419 Haloacid dehalogenase-like hydrolase J6598_01520 PF00027 Cyclic nucleotide-binding domain J6598_01520 PF13545 Crp-like helix-turn-helix domain J6598_01530 PF07722 Peptidase C26 J6598_01535 PF04751 Protein of unknown function (DUF615) J6598_01540 PF01523 Putative modulator of DNA gyrase J6598_01545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J6598_01550 PF01722 BolA-like protein J6598_01560 PF05494 MlaC protein J6598_01565 PF02470 MlaD protein J6598_01570 PF02405 Permease MlaE J6598_01575 PF00005 ABC transporter J6598_01580 PF01380 SIS domain J6598_01580 PF00571 CBS domain J6598_01590 PF06835 Lipopolysaccharide-assembly, LptC-related J6598_01595 PF03968 OstA-like protein J6598_01600 PF00005 ABC transporter J6598_01600 PF12399 Branched-chain amino acid ATP-binding cassette transporter J6598_01605 PF04552 Sigma-54, DNA binding domain J6598_01605 PF04963 Sigma-54 factor, core binding domain J6598_01605 PF00309 Sigma-54 factor, Activator interacting domain (AID) J6598_01610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J6598_01615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6598_01620 PF03668 P-loop ATPase protein family J6598_01625 PF00381 PTS HPr component phosphorylation site J6598_01630 PF13180 PDZ domain J6598_01635 PF13180 PDZ domain J6598_01635 PF00595 PDZ domain J6598_01645 PF03969 AFG1-like ATPase J6598_01650 PF00572 Ribosomal protein L13 J6598_01655 PF00380 Ribosomal protein S9/S16 J6598_01660 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J6598_01660 PF00355 Rieske [2Fe-2S] domain J6598_01665 PF00033 Cytochrome b/b6/petB J6598_01665 PF00032 Cytochrome b(C-terminal)/b6/petD J6598_01670 PF02167 Cytochrome C1 family J6598_01675 PF02798 Glutathione S-transferase, N-terminal domain J6598_01675 PF00043 Glutathione S-transferase, C-terminal domain J6598_01680 PF04386 Stringent starvation protein B J6598_01685 PF04972 BON domain J6598_01690 PF13580 SIS domain J6598_01695 PF02021 Uncharacterised protein family UPF0102 J6598_01700 PF04348 LppC putative lipoprotein J6598_01705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6598_01720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J6598_01725 PF00813 FliP family J6598_01730 PF01313 Bacterial export proteins, family 3 J6598_01735 PF01311 Bacterial export proteins, family 1 J6598_01740 PF01312 FlhB HrpN YscU SpaS Family J6598_01745 PF00771 FHIPEP family J6598_01750 PF00158 Sigma-54 interaction domain J6598_01750 PF02954 Bacterial regulatory protein, Fis family J6598_01750 PF00072 Response regulator receiver domain J6598_01755 PF02049 Flagellar hook-basal body complex protein FliE J6598_01760 PF01514 Secretory protein of YscJ/FliF family J6598_01760 PF08345 Flagellar M-ring protein C-terminal J6598_01765 PF14841 FliG middle domain J6598_01765 PF01706 FliG C-terminal domain J6598_01765 PF14842 FliG N-terminal domain J6598_01775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6598_01775 PF18269 T3SS EscN ATPase C-terminal domain J6598_01795 PF13144 Chaperone for flagella basal body P-ring formation J6598_01800 PF00460 Flagella basal body rod protein J6598_01805 PF00460 Flagella basal body rod protein J6598_01805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_01810 PF03963 Flagellar hook capping protein - N-terminal region J6598_01810 PF13860 FlgD Ig-like domain J6598_01810 PF13861 FlgD Tudor-like domain J6598_01815 PF07559 Flagellar basal body protein FlaE J6598_01815 PF00460 Flagella basal body rod protein J6598_01815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_01820 PF00460 Flagella basal body rod protein J6598_01820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_01825 PF00460 Flagella basal body rod protein J6598_01825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_01830 PF02107 Flagellar L-ring protein J6598_01835 PF02119 Flagellar P-ring protein J6598_01845 PF00460 Flagella basal body rod protein J6598_01845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_01850 PF00669 Bacterial flagellin N-terminal helical region J6598_01860 PF00669 Bacterial flagellin N-terminal helical region J6598_01860 PF00700 Bacterial flagellin C-terminal helical region J6598_01865 PF07196 Flagellin hook IN motif J6598_01865 PF02465 Flagellar hook-associated protein 2 N-terminus J6598_01865 PF07195 Flagellar hook-associated protein 2 C-terminus J6598_01870 PF02561 Flagellar protein FliS J6598_01890 PF04542 Sigma-70 region 2 J6598_01890 PF04545 Sigma-70, region 4 J6598_01895 PF01618 MotA/TolQ/ExbB proton channel family J6598_01900 PF00691 OmpA family J6598_01900 PF13677 Membrane MotB of proton-channel complex MotA/MotB J6598_01910 PF01476 LysM domain J6598_01910 PF01464 Transglycosylase SLT domain J6598_01920 PF02381 MraZ protein, putative antitoxin-like J6598_01925 PF01795 MraW methylase family J6598_01930 PF04999 Cell division protein FtsL J6598_01935 PF03717 Penicillin-binding Protein dimerisation domain J6598_01935 PF00905 Penicillin binding protein transpeptidase domain J6598_01940 PF01225 Mur ligase family, catalytic domain J6598_01940 PF02875 Mur ligase family, glutamate ligase domain J6598_01940 PF08245 Mur ligase middle domain J6598_01945 PF08245 Mur ligase middle domain J6598_01945 PF02875 Mur ligase family, glutamate ligase domain J6598_01945 PF01225 Mur ligase family, catalytic domain J6598_01950 PF00953 Glycosyl transferase family 4 J6598_01950 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J6598_01955 PF02875 Mur ligase family, glutamate ligase domain J6598_01955 PF08245 Mur ligase middle domain J6598_01960 PF01098 Cell cycle protein J6598_01965 PF04101 Glycosyltransferase family 28 C-terminal domain J6598_01965 PF03033 Glycosyltransferase family 28 N-terminal domain J6598_01970 PF01225 Mur ligase family, catalytic domain J6598_01970 PF02875 Mur ligase family, glutamate ligase domain J6598_01970 PF08245 Mur ligase middle domain J6598_01975 PF03799 Cell division protein FtsQ J6598_01975 PF08478 POTRA domain, FtsQ-type J6598_01980 PF02491 SHS2 domain inserted in FTSA J6598_01985 PF12327 FtsZ family, C-terminal domain J6598_01985 PF00091 Tubulin/FtsZ family, GTPase domain J6598_01990 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J6598_02000 PF02810 SEC-C motif J6598_02000 PF07517 SecA DEAD-like domain J6598_02000 PF01043 SecA preprotein cross-linking domain J6598_02000 PF07516 SecA Wing and Scaffold domain J6598_02005 PF00293 NUDIX domain J6598_02010 PF03884 DNA gyrase inhibitor YacG J6598_02015 PF07072 Cell division protein J6598_02020 PF01121 Dephospho-CoA kinase J6598_02025 PF06750 Bacterial Peptidase A24 N-terminal domain J6598_02025 PF01478 Type IV leader peptidase family J6598_02030 PF00482 Type II secretion system (T2SS), protein F J6598_02035 PF00437 Type II/IV secretion system protein J6598_02035 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J6598_02040 PF07963 Prokaryotic N-terminal methylation motif J6598_02045 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J6598_02045 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J6598_02055 PF01510 N-acetylmuramoyl-L-alanine amidase J6598_02060 PF07729 FCD domain J6598_02060 PF00392 Bacterial regulatory proteins, gntR family J6598_02065 PF17831 Pyruvate dehydrogenase E1 component middle domain J6598_02065 PF00456 Transketolase, thiamine diphosphate binding domain J6598_02070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6598_02070 PF00364 Biotin-requiring enzyme J6598_02070 PF02817 e3 binding domain J6598_02075 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_02075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6598_02080 PF00563 EAL domain J6598_02080 PF03707 Bacterial signalling protein N terminal repeat J6598_02080 PF00990 Diguanylate cyclase, GGDEF domain J6598_02085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_02085 PF12729 Four helix bundle sensory module for signal transduction J6598_02085 PF00672 HAMP domain J6598_02090 PF01734 Patatin-like phospholipase J6598_02095 PF00330 Aconitase family (aconitate hydratase) J6598_02095 PF06434 Aconitate hydratase 2 N-terminus J6598_02095 PF11791 Aconitate B N-terminal domain J6598_02100 PF12792 CSS motif domain associated with EAL J6598_02100 PF00563 EAL domain J6598_02110 PF02492 CobW/HypB/UreG, nucleotide-binding domain J6598_02110 PF07683 Cobalamin synthesis protein cobW C-terminal domain J6598_02115 PF00873 AcrB/AcrD/AcrF family J6598_02130 PF07690 Major Facilitator Superfamily J6598_02140 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J6598_02145 PF02152 Dihydroneopterin aldolase J6598_02150 PF02660 Glycerol-3-phosphate acyltransferase J6598_02175 PF07670 Nucleoside recognition J6598_02225 PF05154 TM2 domain J6598_02250 PF00145 C-5 cytosine-specific DNA methylase J6598_02250 PF01381 Helix-turn-helix J6598_02265 PF07670 Nucleoside recognition J6598_02295 PF00206 Lyase J6598_02295 PF14698 Argininosuccinate lyase C-terminal J6598_02300 PF00764 Arginosuccinate synthase J6598_02305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6598_02305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6598_02310 PF00696 Amino acid kinase family J6598_02315 PF01118 Semialdehyde dehydrogenase, NAD binding domain J6598_02315 PF02774 Semialdehyde dehydrogenase, dimerisation domain J6598_02320 PF01546 Peptidase family M20/M25/M40 J6598_02320 PF07687 Peptidase dimerisation domain J6598_02325 PF00311 Phosphoenolpyruvate carboxylase J6598_02335 PF04073 Aminoacyl-tRNA editing domain J6598_02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_02350 PF03466 LysR substrate binding domain J6598_02355 PF03788 LrgA family J6598_02360 PF04172 LrgB-like family J6598_02370 PF01734 Patatin-like phospholipase J6598_02375 PF05192 MutS domain III J6598_02375 PF05188 MutS domain II J6598_02375 PF00488 MutS domain V J6598_02375 PF05190 MutS family domain IV J6598_02375 PF01624 MutS domain I J6598_02380 PF02464 Competence-damaged protein J6598_02385 PF00154 recA bacterial DNA recombination protein J6598_02390 PF02631 RecX family J6598_02395 PF02272 DHHA1 domain J6598_02395 PF01411 tRNA synthetases class II (A) J6598_02395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J6598_02400 PF00696 Amino acid kinase family J6598_02400 PF01842 ACT domain J6598_02400 PF13840 ACT domain J6598_02405 PF02599 Global regulator protein family J6598_02440 PF00768 D-alanyl-D-alanine carboxypeptidase J6598_02445 PF09335 SNARE associated Golgi protein J6598_02450 PF00571 CBS domain J6598_02450 PF03471 Transporter associated domain J6598_02450 PF01595 Cyclin M transmembrane N-terminal domain J6598_02455 PF00710 Asparaginase, N-terminal J6598_02455 PF17763 Glutaminase/Asparaginase C-terminal domain J6598_02470 PF00356 Bacterial regulatory proteins, lacI family J6598_02475 PF02378 Phosphotransferase system, EIIC J6598_02475 PF00367 phosphotransferase system, EIIB J6598_02480 PF11941 Domain of unknown function (DUF3459) J6598_02480 PF00128 Alpha amylase, catalytic domain J6598_02485 PF12464 Maltose acetyltransferase J6598_02485 PF14602 Hexapeptide repeat of succinyl-transferase J6598_02495 PF00849 RNA pseudouridylate synthase J6598_02500 PF00271 Helicase conserved C-terminal domain J6598_02500 PF12137 RNA polymerase recycling family C-terminal J6598_02500 PF00176 SNF2 family N-terminal domain J6598_02500 PF18339 RapA N-terminal Tudor like domain 1 J6598_02500 PF18337 RapA N-terminal Tudor like domain J6598_02530 PF04363 Protein of unknown function (DUF496) J6598_02550 PF02464 Competence-damaged protein J6598_02550 PF00994 Probable molybdopterin binding domain J6598_02560 PF04204 Homoserine O-succinyltransferase J6598_02570 PF01037 Lrp/AsnC ligand binding domain J6598_02575 PF00884 Sulfatase J6598_02595 PF00128 Alpha amylase, catalytic domain J6598_02595 PF02903 Alpha amylase, N-terminal ig-like domain J6598_02595 PF16657 Maltogenic Amylase, C-terminal domain J6598_02615 PF00106 short chain dehydrogenase J6598_02620 PF03577 Peptidase family C69 J6598_02630 PF00465 Iron-containing alcohol dehydrogenase J6598_02635 PF02142 MGS-like domain J6598_02645 PF00210 Ferritin-like domain J6598_02660 PF05127 Helicase J6598_02660 PF17176 tRNA-binding domain J6598_02660 PF13718 GNAT acetyltransferase 2 J6598_02660 PF08351 Domain of unknown function (DUF1726) J6598_02670 PF01584 CheW-like domain J6598_02670 PF00072 Response regulator receiver domain J6598_02680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J6598_02680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J6598_02685 PF02698 DUF218 domain J6598_02690 PF01752 Collagenase J6598_02690 PF08453 Peptidase family M9 N-terminal J6598_02695 PF00501 AMP-binding enzyme J6598_02700 PF13378 Enolase C-terminal domain-like J6598_02705 PF00378 Enoyl-CoA hydratase/isomerase J6598_02710 PF12697 Alpha/beta hydrolase family J6598_02715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6598_02715 PF16582 Middle domain of thiamine pyrophosphate J6598_02715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6598_02720 PF00425 chorismate binding enzyme J6598_02725 PF01040 UbiA prenyltransferase family J6598_02750 PF00270 DEAD/DEAH box helicase J6598_02750 PF00271 Helicase conserved C-terminal domain J6598_02750 PF03880 DbpA RNA binding domain J6598_02755 PF01773 Na+ dependent nucleoside transporter N-terminus J6598_02755 PF07662 Na+ dependent nucleoside transporter C-terminus J6598_02755 PF07670 Nucleoside recognition J6598_02760 PF04307 LexA-binding, inner membrane-associated putative hydrolase J6598_02765 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J6598_02770 PF01544 CorA-like Mg2+ transporter protein J6598_02785 PF01556 DnaJ C terminal domain J6598_02785 PF00226 DnaJ domain J6598_02785 PF00684 DnaJ central domain J6598_02795 PF05068 Mannitol repressor J6598_02800 PF01232 Mannitol dehydrogenase Rossmann domain J6598_02800 PF08125 Mannitol dehydrogenase C-terminal domain J6598_02805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6598_02805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6598_02805 PF02378 Phosphotransferase system, EIIC J6598_02810 PF03279 Bacterial lipid A biosynthesis acyltransferase J6598_02815 PF00294 pfkB family carbohydrate kinase J6598_02815 PF01467 Cytidylyltransferase-like J6598_02820 PF02321 Outer membrane efflux protein J6598_02825 PF00293 NUDIX domain J6598_02830 PF06853 Protein of unknown function (DUF1249) J6598_02835 PF00149 Calcineurin-like phosphoesterase J6598_02840 PF05728 Uncharacterised protein family (UPF0227) J6598_02845 PF01751 Toprim domain J6598_02845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_02845 PF00204 DNA gyrase B J6598_02845 PF00986 DNA gyrase B subunit, carboxyl terminus J6598_02850 PF03989 DNA gyrase C-terminal domain, beta-propeller J6598_02850 PF00521 DNA gyrase/topoisomerase IV, subunit A J6598_02865 PF00854 POT family J6598_02885 PF00684 DnaJ central domain J6598_02885 PF01556 DnaJ C terminal domain J6598_02885 PF00226 DnaJ domain J6598_02895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J6598_02895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J6598_02900 PF03466 LysR substrate binding domain J6598_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_02905 PF00578 AhpC/TSA family J6598_02925 PF01553 Acyltransferase J6598_02930 PF04012 PspA/IM30 family J6598_02945 PF01541 GIY-YIG catalytic domain J6598_02955 PF00892 EamA-like transporter family J6598_02960 PF03167 Uracil DNA glycosylase superfamily J6598_02965 PF00892 EamA-like transporter family J6598_02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_02970 PF03466 LysR substrate binding domain J6598_02975 PF00950 ABC 3 transport family J6598_02980 PF00005 ABC transporter J6598_02985 PF01297 Zinc-uptake complex component A periplasmic J6598_03005 PF01476 LysM domain J6598_03005 PF08525 Opacity-associated protein A N-terminal motif J6598_03005 PF01551 Peptidase family M23 J6598_03010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6598_03015 PF04222 Protein of unknown function (DUF416) J6598_03035 PF02028 BCCT, betaine/carnitine/choline family transporter J6598_03040 PF01966 HD domain J6598_03040 PF01743 Poly A polymerase head domain J6598_03040 PF12627 Probable RNA and SrmB- binding site of polymerase A J6598_03045 PF14815 NUDIX domain J6598_03045 PF10576 Iron-sulfur binding domain of endonuclease III J6598_03045 PF00633 Helix-hairpin-helix motif J6598_03045 PF00730 HhH-GPD superfamily base excision DNA repair protein J6598_03050 PF04362 Bacterial Fe(2+) trafficking J6598_03055 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J6598_03055 PF01464 Transglycosylase SLT domain J6598_03060 PF04076 Bacterial OB fold (BOF) protein J6598_03065 PF00657 GDSL-like Lipase/Acylhydrolase J6598_03070 PF00691 OmpA family J6598_03070 PF01389 OmpA-like transmembrane domain J6598_03075 PF00990 Diguanylate cyclase, GGDEF domain J6598_03080 PF00773 RNB domain J6598_03080 PF08461 Ribonuclease R winged-helix domain J6598_03080 PF00575 S1 RNA binding domain J6598_03080 PF17876 Cold shock domain J6598_03080 PF08206 Ribonuclease B OB domain J6598_03085 PF00588 SpoU rRNA Methylase family J6598_03085 PF08032 RNA 2'-O ribose methyltransferase substrate binding J6598_03095 PF13673 Acetyltransferase (GNAT) domain J6598_03100 PF00270 DEAD/DEAH box helicase J6598_03100 PF00271 Helicase conserved C-terminal domain J6598_03105 PF05175 Methyltransferase small domain J6598_03110 PF05525 Branched-chain amino acid transport protein J6598_03115 PF05525 Branched-chain amino acid transport protein J6598_03130 PF01475 Ferric uptake regulator family J6598_03135 PF01207 Dihydrouridine synthase (Dus) J6598_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_03140 PF08447 PAS fold J6598_03150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_03160 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_03165 PF10952 Protein of unknown function (DUF2753) J6598_03170 PF00378 Enoyl-CoA hydratase/isomerase J6598_03185 PF00106 short chain dehydrogenase J6598_03190 PF04073 Aminoacyl-tRNA editing domain J6598_03190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6598_03190 PF03129 Anticodon binding domain J6598_03195 PF01938 TRAM domain J6598_03195 PF05958 tRNA (Uracil-5-)-methyltransferase J6598_03205 PF02470 MlaD protein J6598_03210 PF04403 Paraquat-inducible protein A J6598_03215 PF17209 Hfq protein J6598_03220 PF13419 Haloacid dehalogenase-like hydrolase J6598_03230 PF00360 Phytochrome region J6598_03230 PF00563 EAL domain J6598_03230 PF01590 GAF domain J6598_03230 PF00990 Diguanylate cyclase, GGDEF domain J6598_03235 PF08206 Ribonuclease B OB domain J6598_03235 PF00773 RNB domain J6598_03235 PF17876 Cold shock domain J6598_03240 PF03466 LysR substrate binding domain J6598_03240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_03245 PF00765 Autoinducer synthase J6598_03250 PF00196 Bacterial regulatory proteins, luxR family J6598_03250 PF03472 Autoinducer binding domain J6598_03255 PF01810 LysE type translocator J6598_03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_03260 PF00672 HAMP domain J6598_03265 PF07499 RuvA, C-terminal domain J6598_03265 PF01330 RuvA N terminal domain J6598_03270 PF05496 Holliday junction DNA helicase RuvB P-loop domain J6598_03270 PF05491 RuvB C-terminal winged helix domain J6598_03270 PF17864 RuvB AAA lid domain J6598_03275 PF01654 Cytochrome bd terminal oxidase subunit I J6598_03280 PF02322 Cytochrome bd terminal oxidase subunit II J6598_03285 PF08173 Membrane bound YbgT-like protein J6598_03290 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) J6598_03295 PF03061 Thioesterase superfamily J6598_03300 PF01618 MotA/TolQ/ExbB proton channel family J6598_03305 PF02472 Biopolymer transport protein ExbD/TolR J6598_03315 PF07676 WD40-like Beta Propeller Repeat J6598_03315 PF04052 TolB amino-terminal domain J6598_03320 PF00691 OmpA family J6598_03325 PF13174 Tetratricopeptide repeat J6598_03325 PF16331 TolA binding protein trimerisation J6598_03390 PF00209 Sodium:neurotransmitter symporter family J6598_03400 PF00209 Sodium:neurotransmitter symporter family J6598_03420 PF07690 Major Facilitator Superfamily J6598_03430 PF01037 Lrp/AsnC ligand binding domain J6598_03445 PF00293 NUDIX domain J6598_03455 PF01641 SelR domain J6598_03460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J6598_03460 PF00128 Alpha amylase, catalytic domain J6598_03465 PF00128 Alpha amylase, catalytic domain J6598_03465 PF02806 Alpha amylase, C-terminal all-beta domain J6598_03465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J6598_03470 PF02446 4-alpha-glucanotransferase J6598_03475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J6598_03475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J6598_03480 PF01263 Aldose 1-epimerase J6598_03485 PF02445 Quinolinate synthetase A protein J6598_03490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_03490 PF00672 HAMP domain J6598_03495 PF01957 NfeD-like C-terminal, partner-binding J6598_03500 PF01145 SPFH domain / Band 7 family J6598_03500 PF16200 C-terminal region of band_7 J6598_03505 PF14824 Sirohaem biosynthesis protein central J6598_03505 PF10414 Sirohaem synthase dimerisation region J6598_03505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6598_03510 PF01507 Phosphoadenosine phosphosulfate reductase family J6598_03515 PF00009 Elongation factor Tu GTP binding domain J6598_03520 PF03600 Citrate transporter J6598_03520 PF02080 TrkA-C domain J6598_03535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_03535 PF08447 PAS fold J6598_03555 PF00005 ABC transporter J6598_03570 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) J6598_03585 PF00719 Inorganic pyrophosphatase J6598_03590 PF11849 Domain of unknown function (DUF3369) J6598_03600 PF00893 Small Multidrug Resistance protein J6598_03605 PF00893 Small Multidrug Resistance protein J6598_03615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6598_03620 PF14814 Bifunctional transglycosylase second domain J6598_03620 PF00912 Transglycosylase J6598_03620 PF00905 Penicillin binding protein transpeptidase domain J6598_03625 PF00270 DEAD/DEAH box helicase J6598_03625 PF04408 Helicase associated domain (HA2) J6598_03625 PF00271 Helicase conserved C-terminal domain J6598_03625 PF08482 ATP-dependent helicase C-terminal J6598_03635 PF03749 Sugar fermentation stimulation protein RE domain J6598_03635 PF17746 SfsA N-terminal OB domain J6598_03640 PF01258 Prokaryotic dksA/traR C4-type zinc finger J6598_03645 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6598_03650 PF01743 Poly A polymerase head domain J6598_03650 PF12626 Polymerase A arginine-rich C-terminus J6598_03650 PF12627 Probable RNA and SrmB- binding site of polymerase A J6598_03655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J6598_03660 PF02548 Ketopantoate hydroxymethyltransferase J6598_03665 PF02569 Pantoate-beta-alanine ligase J6598_03670 PF00375 Sodium:dicarboxylate symporter family J6598_03700 PF01061 ABC-2 type transporter J6598_03705 PF00005 ABC transporter J6598_03710 PF00156 Phosphoribosyl transferase domain J6598_03715 PF00440 Bacterial regulatory proteins, tetR family J6598_03720 PF02441 Flavoprotein J6598_03725 PF08245 Mur ligase middle domain J6598_03725 PF02875 Mur ligase family, glutamate ligase domain J6598_03725 PF01225 Mur ligase family, catalytic domain J6598_03730 PF01569 PAP2 superfamily J6598_03735 PF16363 GDP-mannose 4,6 dehydratase J6598_03740 PF00175 Oxidoreductase NAD-binding domain J6598_03740 PF00970 Oxidoreductase FAD-binding domain J6598_03740 PF00042 Globin J6598_03745 PF03063 Prismane/CO dehydrogenase family J6598_03750 PF00210 Ferritin-like domain J6598_03755 PF01510 N-acetylmuramoyl-L-alanine amidase J6598_03760 PF07308 Protein of unknown function (DUF1456) J6598_03765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J6598_03765 PF00672 HAMP domain J6598_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_03765 PF01627 Hpt domain J6598_03765 PF00512 His Kinase A (phospho-acceptor) domain J6598_03765 PF00072 Response regulator receiver domain J6598_03770 PF01938 TRAM domain J6598_03770 PF05958 tRNA (Uracil-5-)-methyltransferase J6598_03775 PF13291 ACT domain J6598_03775 PF04607 Region found in RelA / SpoT proteins J6598_03775 PF02824 TGS domain J6598_03780 PF03819 MazG nucleotide pyrophosphohydrolase domain J6598_03785 PF06418 CTP synthase N-terminus J6598_03785 PF00117 Glutamine amidotransferase class-I J6598_03790 PF00113 Enolase, C-terminal TIM barrel domain J6598_03790 PF03952 Enolase, N-terminal domain J6598_03805 PF13411 MerR HTH family regulatory protein J6598_03840 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J6598_03850 PF00005 ABC transporter J6598_03850 PF12848 ABC transporter J6598_03870 PF00155 Aminotransferase class I and II J6598_03870 PF00392 Bacterial regulatory proteins, gntR family J6598_03880 PF01810 LysE type translocator J6598_03885 PF01177 Asp/Glu/Hydantoin racemase J6598_03895 PF04074 YhcH/YjgK/YiaL J6598_03900 PF00871 Acetokinase family J6598_03905 PF00924 Mechanosensitive ion channel J6598_03910 PF03734 L,D-transpeptidase catalytic domain J6598_03910 PF17969 L,D-transpeptidase C-terminal domain J6598_03920 PF00474 Sodium:solute symporter family J6598_03925 PF04977 Septum formation initiator J6598_03930 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J6598_03935 PF02542 YgbB family J6598_03940 PF01142 tRNA pseudouridine synthase D (TruD) J6598_03945 PF01975 Survival protein SurE J6598_03955 PF09335 SNARE associated Golgi protein J6598_03960 PF01476 LysM domain J6598_03960 PF01551 Peptidase family M23 J6598_03965 PF00140 Sigma-70 factor, region 1.2 J6598_03965 PF04545 Sigma-70, region 4 J6598_03965 PF04542 Sigma-70 region 2 J6598_03965 PF04539 Sigma-70 region 3 J6598_03970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6598_03980 PF04480 Protein of unknown function (DUF559) J6598_03985 PF03466 LysR substrate binding domain J6598_03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_03990 PF04371 Porphyromonas-type peptidyl-arginine deiminase J6598_03995 PF01425 Amidase J6598_04020 PF00753 Metallo-beta-lactamase superfamily J6598_04030 PF00270 DEAD/DEAH box helicase J6598_04030 PF00271 Helicase conserved C-terminal domain J6598_04035 PF00990 Diguanylate cyclase, GGDEF domain J6598_04045 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase J6598_04055 PF00445 Ribonuclease T2 family J6598_04065 PF03060 Nitronate monooxygenase J6598_04090 PF00293 NUDIX domain J6598_04090 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J6598_04090 PF09297 NADH pyrophosphatase zinc ribbon domain J6598_04105 PF00072 Response regulator receiver domain J6598_04105 PF00486 Transcriptional regulatory protein, C terminal J6598_04125 PF08335 GlnD PII-uridylyltransferase J6598_04125 PF03710 Glutamate-ammonia ligase adenylyltransferase J6598_04135 PF00672 HAMP domain J6598_04135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_04140 PF00027 Cyclic nucleotide-binding domain J6598_04140 PF00520 Ion transport protein J6598_04145 PF08239 Bacterial SH3 domain J6598_04150 PF00171 Aldehyde dehydrogenase family J6598_04150 PF01619 Proline dehydrogenase J6598_04150 PF14850 DNA-binding domain of Proline dehydrogenase J6598_04150 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J6598_04155 PF00293 NUDIX domain J6598_04155 PF09297 NADH pyrophosphatase zinc ribbon domain J6598_04160 PF01208 Uroporphyrinogen decarboxylase (URO-D) J6598_04165 PF00480 ROK family J6598_04170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J6598_04170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J6598_04175 PF00162 Phosphoglycerate kinase J6598_04180 PF01116 Fructose-bisphosphate aldolase class-II J6598_04185 PF01266 FAD dependent oxidoreductase J6598_04205 PF11412 Disulphide bond corrector protein DsbC J6598_04205 PF02683 Cytochrome C biogenesis protein transmembrane region J6598_04210 PF03091 CutA1 divalent ion tolerance protein J6598_04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_04225 PF03466 LysR substrate binding domain J6598_04230 PF01571 Aminomethyltransferase folate-binding domain J6598_04235 PF03937 Flavinator of succinate dehydrogenase J6598_04245 PF00890 FAD binding domain J6598_04245 PF02910 Fumarate reductase flavoprotein C-term J6598_04250 PF04542 Sigma-70 region 2 J6598_04250 PF08281 Sigma-70, region 4 J6598_04255 PF03873 Anti sigma-E protein RseA, C-terminal domain J6598_04255 PF03872 Anti sigma-E protein RseA, N-terminal domain J6598_04260 PF03888 MucB/RseB N-terminal domain J6598_04260 PF17188 MucB/RseB C-terminal domain J6598_04270 PF00679 Elongation factor G C-terminus J6598_04270 PF00009 Elongation factor Tu GTP binding domain J6598_04270 PF03144 Elongation factor Tu domain 2 J6598_04270 PF06421 GTP-binding protein LepA C-terminus J6598_04275 PF10502 Signal peptidase, peptidase S26 J6598_04280 PF00035 Double-stranded RNA binding motif J6598_04280 PF14622 Ribonuclease-III-like J6598_04285 PF07650 KH domain J6598_04285 PF01926 50S ribosome-binding GTPase J6598_04290 PF02565 Recombination protein O C terminal J6598_04290 PF11967 Recombination protein O N terminal J6598_04295 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J6598_04300 PF00459 Inositol monophosphatase family J6598_04305 PF03795 YCII-related domain J6598_04310 PF04279 Intracellular septation protein A J6598_04315 PF00282 Pyridoxal-dependent decarboxylase conserved domain J6598_04320 PF03006 Haemolysin-III related J6598_04325 PF06826 Predicted Permease Membrane Region J6598_04325 PF02080 TrkA-C domain J6598_04380 PF00563 EAL domain J6598_04380 PF00990 Diguanylate cyclase, GGDEF domain J6598_04380 PF03707 Bacterial signalling protein N terminal repeat J6598_04385 PF06877 Regulator of ribonuclease activity B J6598_04400 PF00561 alpha/beta hydrolase fold J6598_04405 PF00034 Cytochrome c J6598_04405 PF03150 Di-haem cytochrome c peroxidase J6598_04410 PF00194 Eukaryotic-type carbonic anhydrase J6598_04415 PF04227 Indigoidine synthase A like protein J6598_04420 PF00294 pfkB family carbohydrate kinase J6598_04435 PF00582 Universal stress protein family J6598_04445 PF00267 Gram-negative porin J6598_04450 PF08241 Methyltransferase domain J6598_04455 PF13545 Crp-like helix-turn-helix domain J6598_04455 PF00027 Cyclic nucleotide-binding domain J6598_04460 PF02566 OsmC-like protein J6598_04475 PF00485 Phosphoribulokinase / Uridine kinase family J6598_04480 PF06794 Uncharacterised protein family (UPF0270) J6598_04485 PF00360 Phytochrome region J6598_04485 PF00990 Diguanylate cyclase, GGDEF domain J6598_04485 PF00563 EAL domain J6598_04485 PF01590 GAF domain J6598_04490 PF00561 alpha/beta hydrolase fold J6598_04495 PF00072 Response regulator receiver domain J6598_04495 PF01584 CheW-like domain J6598_04505 PF09526 Probable metal-binding protein (DUF2387) J6598_04510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6598_04515 PF04102 SlyX J6598_04525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6598_04525 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J6598_04530 PF02954 Bacterial regulatory protein, Fis family J6598_04530 PF00072 Response regulator receiver domain J6598_04530 PF00158 Sigma-54 interaction domain J6598_04550 PF00149 Calcineurin-like phosphoesterase J6598_04550 PF02872 5'-nucleotidase, C-terminal domain J6598_04560 PF00772 DnaB-like helicase N terminal domain J6598_04560 PF03796 DnaB-like helicase C terminal domain J6598_04565 PF00842 Alanine racemase, C-terminal domain J6598_04565 PF01168 Alanine racemase, N-terminal domain J6598_04570 PF01894 Uncharacterised protein family UPF0047 J6598_04575 PF03575 Peptidase family S51 J6598_04585 PF00005 ABC transporter J6598_04590 PF01032 FecCD transport family J6598_04600 PF06228 Haem utilisation ChuX/HutX J6598_04605 PF01243 Pyridoxamine 5'-phosphate oxidase J6598_04625 PF00593 TonB dependent receptor J6598_04625 PF07715 TonB-dependent Receptor Plug Domain J6598_04630 PF12832 MFS_1 like family J6598_04640 PF13443 Cro/C1-type HTH DNA-binding domain J6598_04650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J6598_04650 PF01627 Hpt domain J6598_04650 PF00072 Response regulator receiver domain J6598_04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_04650 PF00672 HAMP domain J6598_04650 PF00512 His Kinase A (phospho-acceptor) domain J6598_04655 PF08329 Chitinase A, N-terminal domain J6598_04655 PF00704 Glycosyl hydrolases family 18 J6598_04665 PF08329 Chitinase A, N-terminal domain J6598_04665 PF00704 Glycosyl hydrolases family 18 J6598_04670 PF17945 Beta/Gamma crystallin J6598_04670 PF12561 ToxR activated gene A lipoprotein domain J6598_04675 PF18416 N-acetylglucosamine binding protein domain 2 J6598_04675 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J6598_04710 PF00704 Glycosyl hydrolases family 18 J6598_04710 PF06483 Chitinase C J6598_04715 PF00072 Response regulator receiver domain J6598_04715 PF01584 CheW-like domain J6598_04720 PF13472 GDSL-like Lipase/Acylhydrolase family J6598_04725 PF00005 ABC transporter J6598_04735 PF01370 NAD dependent epimerase/dehydratase family J6598_04735 PF08338 Domain of unknown function (DUF1731) J6598_04740 PF12792 CSS motif domain associated with EAL J6598_04740 PF00563 EAL domain J6598_04745 PF00155 Aminotransferase class I and II J6598_04750 PF02390 Putative methyltransferase J6598_04755 PF04320 Protein with unknown function (DUF469) J6598_04760 PF04960 Glutaminase J6598_04765 PF00581 Rhodanese-like domain J6598_04770 PF06004 Bacterial protein of unknown function (DUF903) J6598_04780 PF00994 Probable molybdopterin binding domain J6598_04790 PF06738 Putative threonine/serine exporter J6598_04795 PF12821 Threonine/Serine exporter, ThrE J6598_04800 PF00186 Dihydrofolate reductase J6598_04805 PF01507 Phosphoadenosine phosphosulfate reductase family J6598_04810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6598_04810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6598_04815 PF00175 Oxidoreductase NAD-binding domain J6598_04815 PF00667 FAD binding domain J6598_04815 PF00258 Flavodoxin J6598_04820 PF00152 tRNA synthetases class II (D, K and N) J6598_04820 PF01336 OB-fold nucleic acid binding domain J6598_04830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_04830 PF02743 Cache domain J6598_04830 PF00672 HAMP domain J6598_04835 PF03616 Sodium/glutamate symporter J6598_04840 PF00710 Asparaginase, N-terminal J6598_04840 PF17763 Glutaminase/Asparaginase C-terminal domain J6598_04845 PF07023 Protein of unknown function (DUF1315) J6598_04850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J6598_04850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J6598_04865 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J6598_04865 PF04055 Radical SAM superfamily J6598_04870 PF03099 Biotin/lipoate A/B protein ligase family J6598_04875 PF04359 Protein of unknown function (DUF493) J6598_04880 PF07943 Penicillin-binding protein 5, C-terminal domain J6598_04880 PF00768 D-alanyl-D-alanine carboxypeptidase J6598_04885 PF03330 Lytic transglycolase J6598_04885 PF05036 Sporulation related domain J6598_04890 PF13406 Transglycosylase SLT domain J6598_04895 PF01098 Cell cycle protein J6598_04900 PF03717 Penicillin-binding Protein dimerisation domain J6598_04900 PF00905 Penicillin binding protein transpeptidase domain J6598_04905 PF02590 Predicted SPOUT methyltransferase J6598_04915 PF01467 Cytidylyltransferase-like J6598_04930 PF08264 Anticodon-binding domain of tRNA J6598_04930 PF00133 tRNA synthetases class I (I, L, M and V) J6598_04930 PF13603 Leucyl-tRNA synthetase, Domain 2 J6598_04935 PF07295 Zinc-ribbon containing domain J6598_04945 PF01523 Putative modulator of DNA gyrase J6598_04950 PF00258 Flavodoxin J6598_04955 PF02899 Phage integrase, N-terminal SAM-like domain J6598_04955 PF00589 Phage integrase family J6598_04960 PF00072 Response regulator receiver domain J6598_04960 PF00990 Diguanylate cyclase, GGDEF domain J6598_04965 PF01741 Large-conductance mechanosensitive channel, MscL J6598_04975 PF01368 DHH family J6598_04975 PF02272 DHHA1 domain J6598_04975 PF17768 RecJ OB domain J6598_04980 PF13411 MerR HTH family regulatory protein J6598_04985 PF00795 Carbon-nitrogen hydrolase J6598_04990 PF00571 CBS domain J6598_04990 PF03471 Transporter associated domain J6598_04995 PF02130 Uncharacterized protein family UPF0054 J6598_05000 PF02562 PhoH-like protein J6598_05005 PF01938 TRAM domain J6598_05005 PF00919 Uncharacterized protein family UPF0004 J6598_05005 PF04055 Radical SAM superfamily J6598_05010 PF01494 FAD binding domain J6598_05015 PF00857 Isochorismatase family J6598_05020 PF00313 'Cold-shock' DNA-binding domain J6598_05025 PF00990 Diguanylate cyclase, GGDEF domain J6598_05025 PF05230 MASE2 domain J6598_05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_05030 PF03466 LysR substrate binding domain J6598_05040 PF13419 Haloacid dehalogenase-like hydrolase J6598_05055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6598_05055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6598_05065 PF08207 Elongation factor P (EF-P) KOW-like domain J6598_05065 PF01132 Elongation factor P (EF-P) OB domain J6598_05065 PF09285 Elongation factor P, C-terminal J6598_05075 PF00478 IMP dehydrogenase / GMP reductase domain J6598_05095 PF00512 His Kinase A (phospho-acceptor) domain J6598_05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_05095 PF08521 Two-component sensor kinase N-terminal J6598_05100 PF00072 Response regulator receiver domain J6598_05100 PF00486 Transcriptional regulatory protein, C terminal J6598_05110 PF00106 short chain dehydrogenase J6598_05120 PF00501 AMP-binding enzyme J6598_05135 PF01266 FAD dependent oxidoreductase J6598_05145 PF00440 Bacterial regulatory proteins, tetR family J6598_05145 PF17932 Tetracyclin repressor-like, C-terminal domain J6598_05150 PF06224 Winged helix DNA-binding domain J6598_05160 PF07687 Peptidase dimerisation domain J6598_05160 PF01546 Peptidase family M20/M25/M40 J6598_05165 PF07670 Nucleoside recognition J6598_05170 PF07670 Nucleoside recognition J6598_05175 PF02313 Fumarate reductase subunit D J6598_05180 PF02300 Fumarate reductase subunit C J6598_05185 PF13183 4Fe-4S dicluster domain J6598_05185 PF13085 2Fe-2S iron-sulfur cluster binding domain J6598_05190 PF00890 FAD binding domain J6598_05190 PF02910 Fumarate reductase flavoprotein C-term J6598_05195 PF00672 HAMP domain J6598_05195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_05195 PF02743 Cache domain J6598_05200 PF03009 Glycerophosphoryl diester phosphodiesterase family J6598_05205 PF12794 Mechanosensitive ion channel inner membrane domain 1 J6598_05205 PF12795 Mechanosensitive ion channel porin domain J6598_05205 PF00924 Mechanosensitive ion channel J6598_05215 PF01551 Peptidase family M23 J6598_05215 PF01476 LysM domain J6598_05215 PF08525 Opacity-associated protein A N-terminal motif J6598_05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_05225 PF03466 LysR substrate binding domain J6598_05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_05240 PF00672 HAMP domain J6598_05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_05245 PF03466 LysR substrate binding domain J6598_05250 PF00905 Penicillin binding protein transpeptidase domain J6598_05250 PF00912 Transglycosylase J6598_05250 PF17092 Penicillin-binding protein OB-like domain J6598_05255 PF11104 Type IV pilus assembly protein PilM; J6598_05275 PF00263 Bacterial type II and III secretion system protein J6598_05275 PF03958 Bacterial type II/III secretion system short domain J6598_05275 PF07660 Secretin and TonB N terminus short domain J6598_05275 PF11741 AMIN domain J6598_05280 PF01202 Shikimate kinase J6598_05285 PF01761 3-dehydroquinate synthase J6598_05295 PF02086 D12 class N6 adenine-specific DNA methyltransferase J6598_05300 PF00834 Ribulose-phosphate 3 epimerase family J6598_05305 PF13419 Haloacid dehalogenase-like hydrolase J6598_05310 PF00579 tRNA synthetases class I (W and Y) J6598_05320 PF00117 Glutamine amidotransferase class-I J6598_05325 PF00202 Aminotransferase class-III J6598_05330 PF04958 Arginine N-succinyltransferase beta subunit J6598_05335 PF00171 Aldehyde dehydrogenase family J6598_05350 PF13419 Haloacid dehalogenase-like hydrolase J6598_05355 PF07690 Major Facilitator Superfamily J6598_05360 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg J6598_05360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6598_05360 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J6598_05360 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II J6598_05360 PF10371 Domain of unknown function J6598_05365 PF16657 Maltogenic Amylase, C-terminal domain J6598_05365 PF00128 Alpha amylase, catalytic domain J6598_05375 PF04266 ASCH domain J6598_05385 PF01048 Phosphorylase superfamily J6598_05390 PF04973 Nicotinamide mononucleotide transporter J6598_05395 PF02080 TrkA-C domain J6598_05395 PF03600 Citrate transporter J6598_05440 PF01926 50S ribosome-binding GTPase J6598_05440 PF06071 Protein of unknown function (DUF933) J6598_05445 PF01195 Peptidyl-tRNA hydrolase J6598_05450 PF00149 Calcineurin-like phosphoesterase J6598_05450 PF02872 5'-nucleotidase, C-terminal domain J6598_05455 PF14572 Phosphoribosyl synthetase-associated domain J6598_05455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J6598_05465 PF08544 GHMP kinases C terminal J6598_05465 PF00288 GHMP kinases N terminal domain J6598_05470 PF03550 Outer membrane lipoprotein LolB J6598_05475 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J6598_05475 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J6598_05475 PF01488 Shikimate / quinate 5-dehydrogenase J6598_05480 PF03462 PCRF domain J6598_05480 PF00472 RF-1 domain J6598_05485 PF13847 Methyltransferase domain J6598_05485 PF17827 PrmC N-terminal domain J6598_05495 PF13369 Transglutaminase-like superfamily J6598_05500 PF00793 DAHP synthetase I family J6598_05505 PF01228 Glycine radical J6598_05515 PF03167 Uracil DNA glycosylase superfamily J6598_05525 PF01204 Trehalase J6598_05535 PF01161 Phosphatidylethanolamine-binding protein J6598_05540 PF00709 Adenylosuccinate synthetase J6598_05555 PF00155 Aminotransferase class I and II J6598_05560 PF07690 Major Facilitator Superfamily J6598_05565 PF03466 LysR substrate binding domain J6598_05565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_05570 PF00106 short chain dehydrogenase J6598_05575 PF08496 Peptidase family S49 N-terminal J6598_05575 PF01343 Peptidase family S49 J6598_05580 PF07690 Major Facilitator Superfamily J6598_05585 PF00563 EAL domain J6598_05585 PF00990 Diguanylate cyclase, GGDEF domain J6598_05585 PF03707 Bacterial signalling protein N terminal repeat J6598_05590 PF02635 DsrE/DsrF-like family J6598_05600 PF12838 4Fe-4S dicluster domain J6598_05605 PF01136 Peptidase family U32 J6598_05605 PF16325 Peptidase family U32 C-terminal domain J6598_05630 PF04996 Succinylarginine dihydrolase J6598_05635 PF01751 Toprim domain J6598_05635 PF01131 DNA topoisomerase J6598_05635 PF08272 Topoisomerase I zinc-ribbon-like J6598_05635 PF01396 Topoisomerase DNA binding C4 zinc finger J6598_05640 PF01609 Transposase DDE domain J6598_05640 PF13006 Insertion element 4 transposase N-terminal J6598_05660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_05660 PF08447 PAS fold J6598_05665 PF02838 Glycosyl hydrolase family 20, domain 2 J6598_05665 PF00728 Glycosyl hydrolase family 20, catalytic domain J6598_05670 PF01869 BadF/BadG/BcrA/BcrD ATPase family J6598_05680 PF00005 ABC transporter J6598_05680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_05685 PF00005 ABC transporter J6598_05685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_05690 PF00528 Binding-protein-dependent transport system inner membrane component J6598_05690 PF12911 N-terminal TM domain of oligopeptide transport permease C J6598_05695 PF00528 Binding-protein-dependent transport system inner membrane component J6598_05700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_05705 PF00072 Response regulator receiver domain J6598_05705 PF09308 LuxQ, periplasmic J6598_05705 PF00512 His Kinase A (phospho-acceptor) domain J6598_05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_05725 PF10725 Protein of unknown function (DUF2517) J6598_05735 PF05114 Protein of unknown function (DUF692) J6598_05755 PF13426 PAS domain J6598_05755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_05755 PF08447 PAS fold J6598_05770 PF04632 Fusaric acid resistance protein family J6598_05775 PF00994 Probable molybdopterin binding domain J6598_05775 PF03454 MoeA C-terminal region (domain IV) J6598_05775 PF03453 MoeA N-terminal region (domain I and II) J6598_05780 PF12804 MobA-like NTP transferase domain J6598_05785 PF00005 ABC transporter J6598_05790 PF00528 Binding-protein-dependent transport system inner membrane component J6598_05795 PF12849 PBP superfamily domain J6598_05800 PF02954 Bacterial regulatory protein, Fis family J6598_05800 PF00072 Response regulator receiver domain J6598_05800 PF00158 Sigma-54 interaction domain J6598_05805 PF00989 PAS fold J6598_05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_05805 PF00512 His Kinase A (phospho-acceptor) domain J6598_05815 PF02634 FdhD/NarQ family J6598_05850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J6598_05850 PF12838 4Fe-4S dicluster domain J6598_05850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6598_05850 PF00384 Molybdopterin oxidoreductase J6598_05850 PF01568 Molydopterin dinucleotide binding domain J6598_05850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J6598_05850 PF12838 4Fe-4S dicluster domain J6598_05850 PF01568 Molydopterin dinucleotide binding domain J6598_05850 PF00384 Molybdopterin oxidoreductase J6598_05850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6598_05855 PF13247 4Fe-4S dicluster domain J6598_05875 PF00390 Malic enzyme, N-terminal domain J6598_05875 PF03949 Malic enzyme, NAD binding domain J6598_05880 PF16998 17 kDa outer membrane surface antigen J6598_05880 PF05433 Glycine zipper 2TM domain J6598_05890 PF00860 Permease family J6598_05895 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_05900 PF00672 HAMP domain J6598_05900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_05925 PF02685 Glucokinase J6598_05930 PF01380 SIS domain J6598_05930 PF01418 Helix-turn-helix domain, rpiR family J6598_05935 PF00224 Pyruvate kinase, barrel domain J6598_05935 PF02887 Pyruvate kinase, alpha/beta domain J6598_05950 PF07969 Amidohydrolase family J6598_05960 PF02049 Flagellar hook-basal body complex protein FliE J6598_05965 PF08345 Flagellar M-ring protein C-terminal J6598_05965 PF01514 Secretory protein of YscJ/FliF family J6598_05970 PF14842 FliG N-terminal domain J6598_05970 PF14841 FliG middle domain J6598_05970 PF01706 FliG C-terminal domain J6598_05980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6598_05980 PF18269 T3SS EscN ATPase C-terminal domain J6598_06000 PF02154 Flagellar motor switch protein FliM J6598_06000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J6598_06005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J6598_06010 PF04347 Flagellar biosynthesis protein, FliO J6598_06015 PF00813 FliP family J6598_06020 PF01313 Bacterial export proteins, family 3 J6598_06025 PF01311 Bacterial export proteins, family 1 J6598_06030 PF01312 FlhB HrpN YscU SpaS Family J6598_06035 PF00771 FHIPEP family J6598_06040 PF00448 SRP54-type protein, GTPase domain J6598_06045 PF10609 NUBPL iron-transfer P-loop NTPase J6598_06050 PF04542 Sigma-70 region 2 J6598_06050 PF04539 Sigma-70 region 3 J6598_06050 PF04545 Sigma-70, region 4 J6598_06055 PF00072 Response regulator receiver domain J6598_06060 PF04344 Chemotaxis phosphatase, CheZ J6598_06065 PF00072 Response regulator receiver domain J6598_06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_06065 PF01627 Hpt domain J6598_06065 PF01584 CheW-like domain J6598_06065 PF02895 Signal transducing histidine kinase, homodimeric domain J6598_06070 PF01339 CheB methylesterase J6598_06070 PF00072 Response regulator receiver domain J6598_06075 PF01618 MotA/TolQ/ExbB proton channel family J6598_06080 PF13677 Membrane MotB of proton-channel complex MotA/MotB J6598_06080 PF00691 OmpA family J6598_06085 PF13614 AAA domain J6598_06095 PF01584 CheW-like domain J6598_06105 PF00005 ABC transporter J6598_06110 PF03379 CcmB protein J6598_06115 PF01578 Cytochrome C assembly protein J6598_06120 PF04995 Heme exporter protein D (CcmD) J6598_06125 PF03100 CcmE J6598_06130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J6598_06130 PF01578 Cytochrome C assembly protein J6598_06135 PF08534 Redoxin J6598_06140 PF03918 Cytochrome C biogenesis protein J6598_06150 PF04333 MlaA lipoprotein J6598_06155 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J6598_06155 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J6598_06160 PF00462 Glutaredoxin J6598_06165 PF00291 Pyridoxal-phosphate dependent enzyme J6598_06170 PF03222 Tryptophan/tyrosine permease family J6598_06175 PF00871 Acetokinase family J6598_06180 PF01228 Glycine radical J6598_06180 PF02901 Pyruvate formate lyase-like J6598_06185 PF01042 Endoribonuclease L-PSP J6598_06190 PF01189 16S rRNA methyltransferase RsmB/F J6598_06190 PF01029 NusB family J6598_06220 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J6598_06220 PF01243 Pyridoxamine 5'-phosphate oxidase J6598_06225 PF00043 Glutathione S-transferase, C-terminal domain J6598_06225 PF13417 Glutathione S-transferase, N-terminal domain J6598_06245 PF08007 Cupin superfamily protein J6598_06250 PF08328 Adenylosuccinate lyase C-terminal J6598_06250 PF00206 Lyase J6598_06255 PF04356 Protein of unknown function (DUF489) J6598_06265 PF00293 NUDIX domain J6598_06270 PF00849 RNA pseudouridylate synthase J6598_06275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6598_06275 PF02378 Phosphotransferase system, EIIC J6598_06275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6598_06280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6598_06285 PF07690 Major Facilitator Superfamily J6598_06290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6598_06290 PF02378 Phosphotransferase system, EIIC J6598_06290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6598_06320 PF13580 SIS domain J6598_06330 PF00356 Bacterial regulatory proteins, lacI family J6598_06330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J6598_06335 PF00367 phosphotransferase system, EIIB J6598_06335 PF02378 Phosphotransferase system, EIIC J6598_06340 PF00155 Aminotransferase class I and II J6598_06360 PF03496 ADP-ribosyltransferase exoenzyme J6598_06365 PF01312 FlhB HrpN YscU SpaS Family J6598_06370 PF01311 Bacterial export proteins, family 1 J6598_06375 PF01313 Bacterial export proteins, family 3 J6598_06380 PF00813 FliP family J6598_06385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J6598_06390 PF02120 Flagellar hook-length control protein FliK J6598_06400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6598_06400 PF02874 ATP synthase alpha/beta family, beta-barrel domain J6598_06400 PF18269 T3SS EscN ATPase C-terminal domain J6598_06405 PF07201 HrpJ-like domain J6598_06410 PF09059 TyeA J6598_06420 PF09474 Type III secretion system YscX (type_III_YscX) J6598_06430 PF00771 FHIPEP family J6598_06435 PF09621 Type III secretion system regulator (LcrR) J6598_06440 PF07216 LcrG protein J6598_06445 PF04792 V antigen (LcrV) protein J6598_06450 PF07720 Tetratricopeptide repeat J6598_06455 PF04888 Secretion system effector C (SseC) like family J6598_06460 PF05844 YopD protein J6598_06465 PF05932 Tir chaperone protein (CesT) family J6598_06475 PF09619 Type III secretion system lipoprotein chaperone (YscW) J6598_06480 PF12833 Helix-turn-helix domain J6598_06485 PF16806 Antiactivator protein ExsD J6598_06490 PF05932 Tir chaperone protein (CesT) family J6598_06495 PF00263 Bacterial type II and III secretion system protein J6598_06495 PF03958 Bacterial type II/III secretion system short domain J6598_06500 PF16697 Inner membrane component of T3SS, cytoplasmic domain J6598_06500 PF16693 Inner membrane component of T3SS, periplasmic domain J6598_06510 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF J6598_06515 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) J6598_06520 PF09025 YopR, type III needle-polymerisation regulator J6598_06525 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI J6598_06530 PF01514 Secretory protein of YscJ/FliF family J6598_06535 PF06578 YOP proteins translocation protein K (YscK) J6598_06540 PF02108 Flagellar assembly protein FliH J6598_06545 PF02075 Crossover junction endodeoxyribonuclease RuvC J6598_06555 PF00873 AcrB/AcrD/AcrF family J6598_06560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6598_06560 PF02770 Acyl-CoA dehydrogenase, middle domain J6598_06560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6598_06560 PF09317 Domain of unknown function (DUF1974) J6598_06565 PF00440 Bacterial regulatory proteins, tetR family J6598_06585 PF01668 SmpB protein J6598_06590 PF03364 Polyketide cyclase / dehydrase and lipid transport J6598_06595 PF03658 RnfH family Ubiquitin J6598_06600 PF07687 Peptidase dimerisation domain J6598_06600 PF01546 Peptidase family M20/M25/M40 J6598_06605 PF09317 Domain of unknown function (DUF1974) J6598_06605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6598_06605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6598_06605 PF02770 Acyl-CoA dehydrogenase, middle domain J6598_06610 PF13580 SIS domain J6598_06615 PF13230 Glutamine amidotransferases class-II J6598_06625 PF01933 Uncharacterised protein family UPF0052 J6598_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_06635 PF00512 His Kinase A (phospho-acceptor) domain J6598_06635 PF09456 RcsC Alpha-Beta-Loop (ABL) J6598_06635 PF00072 Response regulator receiver domain J6598_06645 PF00196 Bacterial regulatory proteins, luxR family J6598_06645 PF00072 Response regulator receiver domain J6598_06650 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J6598_06650 PF00672 HAMP domain J6598_06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_06650 PF07730 Histidine kinase J6598_06655 PF04055 Radical SAM superfamily J6598_06655 PF06463 Molybdenum Cofactor Synthesis C J6598_06660 PF12838 4Fe-4S dicluster domain J6598_06660 PF13187 4Fe-4S dicluster domain J6598_06670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6598_06670 PF00384 Molybdopterin oxidoreductase J6598_06670 PF01568 Molydopterin dinucleotide binding domain J6598_06670 PF10518 TAT (twin-arginine translocation) pathway signal sequence J6598_06675 PF12800 4Fe-4S binding domain J6598_06675 PF12838 4Fe-4S dicluster domain J6598_06680 PF12801 4Fe-4S binding domain J6598_06680 PF12837 4Fe-4S binding domain J6598_06685 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) J6598_06690 PF03264 NapC/NirT cytochrome c family, N-terminal region J6598_06695 PF00994 Probable molybdopterin binding domain J6598_06700 PF01967 MoaC family J6598_06705 PF02597 ThiS family J6598_06710 PF02391 MoaE protein J6598_06720 PF00528 Binding-protein-dependent transport system inner membrane component J6598_06725 PF00005 ABC transporter J6598_06725 PF03459 TOBE domain J6598_06730 PF00561 alpha/beta hydrolase fold J6598_06735 PF06406 StbA protein J6598_06745 PF00899 ThiF family J6598_06750 PF00994 Probable molybdopterin binding domain J6598_06750 PF03454 MoeA C-terminal region (domain IV) J6598_06750 PF03453 MoeA N-terminal region (domain I and II) J6598_06755 PF01227 GTP cyclohydrolase I J6598_06760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_06760 PF00672 HAMP domain J6598_06765 PF17200 Single Cache domain 2 J6598_06765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_06765 PF00672 HAMP domain J6598_06770 PF01268 Formate--tetrahydrofolate ligase J6598_06780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_06780 PF03466 LysR substrate binding domain J6598_06785 PF04264 YceI-like domain J6598_06795 PF05221 S-adenosyl-L-homocysteine hydrolase J6598_06795 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J6598_06810 PF07687 Peptidase dimerisation domain J6598_06810 PF01546 Peptidase family M20/M25/M40 J6598_06815 PF17810 Arginine decarboxylase helical bundle domain J6598_06815 PF17944 Arginine decarboxylase C-terminal helical extension J6598_06815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J6598_06830 PF00672 HAMP domain J6598_06830 PF12729 Four helix bundle sensory module for signal transduction J6598_06830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_06840 PF01042 Endoribonuclease L-PSP J6598_06845 PF03313 Serine dehydratase alpha chain J6598_06850 PF13309 HTH domain J6598_06850 PF08348 YheO-like PAS domain J6598_06855 PF00300 Histidine phosphatase superfamily (branch 1) J6598_06860 PF07055 Enoyl reductase FAD binding domain J6598_06860 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J6598_06860 PF12241 Trans-2-enoyl-CoA reductase catalytic region J6598_06865 PF03606 C4-dicarboxylate anaerobic carrier J6598_06870 PF00155 Aminotransferase class I and II J6598_06880 PF00230 Major intrinsic protein J6598_06885 PF10145 Phage-related minor tail protein J6598_06885 PF01464 Transglycosylase SLT domain J6598_06885 PF01551 Peptidase family M23 J6598_06900 PF13396 Phospholipase_D-nuclease N-terminal J6598_06900 PF13091 PLD-like domain J6598_06910 PF00551 Formyl transferase J6598_06910 PF01842 ACT domain J6598_06915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J6598_06925 PF00085 Thioredoxin J6598_06930 PF01648 4'-phosphopantetheinyl transferase superfamily J6598_06935 PF00877 NlpC/P60 family J6598_06940 PF05971 RNA methyltransferase J6598_06945 PF01575 MaoC like domain J6598_06950 PF00939 Sodium:sulfate symporter transmembrane region J6598_06960 PF17969 L,D-transpeptidase C-terminal domain J6598_06960 PF01476 LysM domain J6598_06960 PF03734 L,D-transpeptidase catalytic domain J6598_06975 PF01047 MarR family J6598_06975 PF00480 ROK family J6598_06980 PF01979 Amidohydrolase family J6598_06985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J6598_06990 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J6598_06990 PF00367 phosphotransferase system, EIIB J6598_06990 PF02378 Phosphotransferase system, EIIC J6598_06995 PF03173 Putative carbohydrate binding domain J6598_06995 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain J6598_06995 PF02838 Glycosyl hydrolase family 20, domain 2 J6598_06995 PF00728 Glycosyl hydrolase family 20, catalytic domain J6598_07000 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6598_07000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J6598_07005 PF01475 Ferric uptake regulator family J6598_07015 PF00258 Flavodoxin J6598_07020 PF01402 Ribbon-helix-helix protein, copG family J6598_07030 PF12697 Alpha/beta hydrolase family J6598_07035 PF03925 SeqA protein C-terminal domain J6598_07035 PF17206 SeqA protein N-terminal domain J6598_07040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J6598_07040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J6598_07040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J6598_07040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J6598_07045 PF13406 Transglycosylase SLT domain J6598_07050 PF01066 CDP-alcohol phosphatidyltransferase J6598_07055 PF00005 ABC transporter J6598_07065 PF13416 Bacterial extracellular solute-binding protein J6598_07070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6598_07070 PF00403 Heavy-metal-associated domain J6598_07070 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_07075 PF02627 Carboxymuconolactone decarboxylase family J6598_07095 PF01103 Surface antigen J6598_07095 PF07244 Surface antigen variable number repeat J6598_07095 PF17243 POTRA domain TamA domain 1 J6598_07100 PF04357 TamB, inner membrane protein subunit of TAM complex J6598_07120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J6598_07125 PF00563 EAL domain J6598_07125 PF03707 Bacterial signalling protein N terminal repeat J6598_07125 PF00990 Diguanylate cyclase, GGDEF domain J6598_07130 PF01464 Transglycosylase SLT domain J6598_07130 PF14718 Soluble lytic murein transglycosylase L domain J6598_07135 PF00356 Bacterial regulatory proteins, lacI family J6598_07140 PF00793 DAHP synthetase I family J6598_07145 PF00593 TonB dependent receptor J6598_07145 PF07715 TonB-dependent Receptor Plug Domain J6598_07150 PF00425 chorismate binding enzyme J6598_07155 PF00501 AMP-binding enzyme J6598_07155 PF13193 AMP-binding enzyme C-terminal domain J6598_07160 PF00857 Isochorismatase family J6598_07160 PF00550 Phosphopantetheine attachment site J6598_07170 PF00501 AMP-binding enzyme J6598_07170 PF00668 Condensation domain J6598_07170 PF00550 Phosphopantetheine attachment site J6598_07170 PF00975 Thioesterase domain J6598_07180 PF00676 Dehydrogenase E1 component J6598_07185 PF02779 Transketolase, pyrimidine binding domain J6598_07185 PF02780 Transketolase, C-terminal domain J6598_07190 PF00364 Biotin-requiring enzyme J6598_07190 PF02817 e3 binding domain J6598_07190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6598_07195 PF00313 'Cold-shock' DNA-binding domain J6598_07220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_07225 PF00455 DeoR C terminal sensor domain J6598_07225 PF08220 DeoR-like helix-turn-helix domain J6598_07230 PF01228 Glycine radical J6598_07230 PF02901 Pyruvate formate lyase-like J6598_07235 PF04055 Radical SAM superfamily J6598_07240 PF00923 Transaldolase/Fructose-6-phosphate aldolase J6598_07250 PF01966 HD domain J6598_07255 PF00849 RNA pseudouridylate synthase J6598_07255 PF01479 S4 domain J6598_07265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_07270 PF12850 Calcineurin-like phosphoesterase superfamily domain J6598_07285 PF13144 Chaperone for flagella basal body P-ring formation J6598_07290 PF01584 CheW-like domain J6598_07290 PF00072 Response regulator receiver domain J6598_07295 PF01739 CheR methyltransferase, SAM binding domain J6598_07295 PF03705 CheR methyltransferase, all-alpha domain J6598_07300 PF00460 Flagella basal body rod protein J6598_07305 PF00460 Flagella basal body rod protein J6598_07305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_07310 PF13860 FlgD Ig-like domain J6598_07310 PF13861 FlgD Tudor-like domain J6598_07310 PF03963 Flagellar hook capping protein - N-terminal region J6598_07315 PF00460 Flagella basal body rod protein J6598_07315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_07315 PF07559 Flagellar basal body protein FlaE J6598_07320 PF00460 Flagella basal body rod protein J6598_07320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_07325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_07325 PF00460 Flagella basal body rod protein J6598_07330 PF02107 Flagellar L-ring protein J6598_07335 PF02119 Flagellar P-ring protein J6598_07340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J6598_07340 PF10135 Rod binding protein J6598_07345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6598_07345 PF07196 Flagellin hook IN motif J6598_07350 PF00669 Bacterial flagellin N-terminal helical region J6598_07355 PF03448 MgtE intracellular N domain J6598_07355 PF01769 Divalent cation transporter J6598_07355 PF00571 CBS domain J6598_07360 PF02541 Ppx/GppA phosphatase family J6598_07365 PF13089 Polyphosphate kinase N-terminal domain J6598_07365 PF02503 Polyphosphate kinase middle domain J6598_07365 PF13090 Polyphosphate kinase C-terminal domain 2 J6598_07365 PF17941 Polyphosphate kinase C-terminal domain 1 J6598_07370 PF01842 ACT domain J6598_07380 PF06490 Flagellar regulatory protein FleQ J6598_07380 PF02954 Bacterial regulatory protein, Fis family J6598_07380 PF00158 Sigma-54 interaction domain J6598_07385 PF13188 PAS domain J6598_07385 PF00512 His Kinase A (phospho-acceptor) domain J6598_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_07390 PF02954 Bacterial regulatory protein, Fis family J6598_07390 PF00072 Response regulator receiver domain J6598_07390 PF00158 Sigma-54 interaction domain J6598_07395 PF01784 NIF3 (NGG1p interacting factor 3) J6598_07400 PF00551 Formyl transferase J6598_07405 PF02769 AIR synthase related protein, C-terminal domain J6598_07405 PF00586 AIR synthase related protein, N-terminal domain J6598_07420 PF00308 Bacterial dnaA protein J6598_07425 PF00463 Isocitrate lyase family J6598_07430 PF01274 Malate synthase J6598_07445 PF14437 MafB19-like deaminase J6598_07450 PF00528 Binding-protein-dependent transport system inner membrane component J6598_07455 PF00528 Binding-protein-dependent transport system inner membrane component J6598_07460 PF00005 ABC transporter J6598_07465 PF01895 PhoU domain J6598_07470 PF00571 CBS domain J6598_07470 PF03471 Transporter associated domain J6598_07470 PF01595 Cyclin M transmembrane N-terminal domain J6598_07480 PF02574 Homocysteine S-methyltransferase J6598_07480 PF02607 B12 binding domain J6598_07480 PF00809 Pterin binding enzyme J6598_07480 PF02310 B12 binding domain J6598_07480 PF02965 Vitamin B12 dependent methionine synthase, activation domain J6598_07485 PF13520 Amino acid permease J6598_07490 PF04116 Fatty acid hydroxylase superfamily J6598_07500 PF00005 ABC transporter J6598_07505 PF00528 Binding-protein-dependent transport system inner membrane component J6598_07510 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_07515 PF00990 Diguanylate cyclase, GGDEF domain J6598_07520 PF07690 Major Facilitator Superfamily J6598_07525 PF05231 MASE1 J6598_07525 PF07730 Histidine kinase J6598_07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_07530 PF00196 Bacterial regulatory proteins, luxR family J6598_07530 PF00072 Response regulator receiver domain J6598_07535 PF14760 Rnk N-terminus J6598_07535 PF01272 Transcription elongation factor, GreA/GreB, C-term J6598_07550 PF00245 Alkaline phosphatase J6598_07555 PF00245 Alkaline phosphatase J6598_07560 PF01926 50S ribosome-binding GTPase J6598_07565 PF00850 Histone deacetylase domain J6598_07575 PF13307 Helicase C-terminal domain J6598_07575 PF06733 DEAD_2 J6598_07580 PF13609 Gram-negative porin J6598_07585 PF02153 Prephenate dehydrogenase J6598_07585 PF01817 Chorismate mutase type II J6598_07590 PF00793 DAHP synthetase I family J6598_07595 PF00483 Nucleotidyl transferase J6598_07600 PF07549 SecD/SecF GG Motif J6598_07600 PF02355 Protein export membrane protein J6598_07605 PF07549 SecD/SecF GG Motif J6598_07605 PF13721 SecD export protein N-terminal TM region J6598_07605 PF02355 Protein export membrane protein J6598_07640 PF01230 HIT domain J6598_07645 PF00672 HAMP domain J6598_07645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_07655 PF01979 Amidohydrolase family J6598_07675 PF00375 Sodium:dicarboxylate symporter family J6598_07680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_07680 PF00672 HAMP domain J6598_07695 PF05661 Protein of unknown function (DUF808) J6598_07700 PF01432 Peptidase family M3 J6598_07700 PF08439 Oligopeptidase F J6598_07705 PF00860 Permease family J6598_07710 PF05728 Uncharacterised protein family (UPF0227) J6598_07715 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_07725 PF04055 Radical SAM superfamily J6598_07730 PF00563 EAL domain J6598_07730 PF03707 Bacterial signalling protein N terminal repeat J6598_07730 PF00990 Diguanylate cyclase, GGDEF domain J6598_07735 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_07735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6598_07745 PF07678 A-macroglobulin TED domain J6598_07745 PF17962 Bacterial macroglobulin domain 6 J6598_07745 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J6598_07745 PF01835 MG2 domain J6598_07745 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J6598_07745 PF07703 Alpha-2-macroglobulin bait region domain J6598_07745 PF00207 Alpha-2-macroglobulin family J6598_07745 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J6598_07745 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J6598_07750 PF06832 Penicillin-Binding Protein C-terminus Family J6598_07750 PF00912 Transglycosylase J6598_07750 PF00905 Penicillin binding protein transpeptidase domain J6598_07760 PF02568 Thiamine biosynthesis protein (ThiI) J6598_07760 PF02926 THUMP domain J6598_07770 PF03458 UPF0126 domain J6598_07775 PF00669 Bacterial flagellin N-terminal helical region J6598_07775 PF07196 Flagellin hook IN motif J6598_07775 PF00700 Bacterial flagellin C-terminal helical region J6598_07780 PF00669 Bacterial flagellin N-terminal helical region J6598_07780 PF07196 Flagellin hook IN motif J6598_07780 PF00700 Bacterial flagellin C-terminal helical region J6598_07790 PF07195 Flagellar hook-associated protein 2 C-terminus J6598_07790 PF07196 Flagellin hook IN motif J6598_07790 PF02465 Flagellar hook-associated protein 2 N-terminus J6598_07795 PF02561 Flagellar protein FliS J6598_07830 PF16254 Domain of unknown function (DUF4910) J6598_07830 PF16221 winged helix-turn-helix J6598_07830 PF09940 Domain of unknown function (DUF2172) J6598_07850 PF03102 NeuB family J6598_07850 PF08666 SAF domain J6598_07860 PF02348 Cytidylyltransferase J6598_07880 PF00501 AMP-binding enzyme J6598_07880 PF13193 AMP-binding enzyme C-terminal domain J6598_07895 PF00535 Glycosyl transferase family 2 J6598_07900 PF01501 Glycosyl transferase family 8 J6598_07910 PF00535 Glycosyl transferase family 2 J6598_07910 PF01501 Glycosyl transferase family 8 J6598_07920 PF00535 Glycosyl transferase family 2 J6598_07930 PF00483 Nucleotidyl transferase J6598_07935 PF16363 GDP-mannose 4,6 dehydratase J6598_07940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J6598_07945 PF08421 Putative zinc binding domain J6598_07945 PF08484 C-methyltransferase C-terminal domain J6598_07950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J6598_07955 PF04989 Cephalosporin hydroxylase J6598_07985 PF00551 Formyl transferase J6598_07985 PF02911 Formyl transferase, C-terminal domain J6598_07990 PF00391 PEP-utilising enzyme, mobile domain J6598_07990 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J6598_07995 PF00117 Glutamine amidotransferase class-I J6598_08000 PF00483 Nucleotidyl transferase J6598_08010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J6598_08010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J6598_08010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J6598_08020 PF02371 Transposase IS116/IS110/IS902 family J6598_08020 PF01548 Transposase J6598_08030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J6598_08035 PF02719 Polysaccharide biosynthesis protein J6598_08040 PF01497 Periplasmic binding protein J6598_08050 PF01048 Phosphorylase superfamily J6598_08055 PF02535 ZIP Zinc transporter J6598_08060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_08060 PF00672 HAMP domain J6598_08065 PF00459 Inositol monophosphatase family J6598_08075 PF02798 Glutathione S-transferase, N-terminal domain J6598_08075 PF00043 Glutathione S-transferase, C-terminal domain J6598_08080 PF07690 Major Facilitator Superfamily J6598_08095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_08095 PF03466 LysR substrate binding domain J6598_08100 PF02634 FdhD/NarQ family J6598_08105 PF00384 Molybdopterin oxidoreductase J6598_08115 PF05164 Cell division protein ZapA J6598_08120 PF03695 Uncharacterised protein family (UPF0149) J6598_08125 PF01494 FAD binding domain J6598_08130 PF01494 FAD binding domain J6598_08140 PF01571 Aminomethyltransferase folate-binding domain J6598_08140 PF08669 Glycine cleavage T-protein C-terminal barrel domain J6598_08145 PF01597 Glycine cleavage H-protein J6598_08150 PF02347 Glycine cleavage system P-protein J6598_08155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_08155 PF08447 PAS fold J6598_08175 PF00324 Amino acid permease J6598_08185 PF03618 Kinase/pyrophosphorylase J6598_08190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J6598_08190 PF02896 PEP-utilising enzyme, TIM barrel domain J6598_08190 PF00391 PEP-utilising enzyme, mobile domain J6598_08200 PF00082 Subtilase family J6598_08200 PF01483 Proprotein convertase P-domain J6598_08205 PF03180 NLPA lipoprotein J6598_08210 PF00884 Sulfatase J6598_08210 PF11893 Domain of unknown function (DUF3413) J6598_08215 PF07208 Protein of unknown function (DUF1414) J6598_08220 PF04245 37-kD nucleoid-associated bacterial protein J6598_08225 PF01547 Bacterial extracellular solute-binding protein J6598_08230 PF00528 Binding-protein-dependent transport system inner membrane component J6598_08230 PF14785 Maltose transport system permease protein MalF P2 domain J6598_08235 PF00528 Binding-protein-dependent transport system inner membrane component J6598_08240 PF08402 TOBE domain J6598_08240 PF00005 ABC transporter J6598_08245 PF03976 Polyphosphate kinase 2 (PPK2) J6598_08250 PF00561 alpha/beta hydrolase fold J6598_08260 PF01594 AI-2E family transporter J6598_08270 PF07720 Tetratricopeptide repeat J6598_08270 PF01435 Peptidase family M48 J6598_08275 PF00578 AhpC/TSA family J6598_08280 PF03960 ArsC family J6598_08290 PF04336 Acyl carrier protein phosphodiesterase J6598_08300 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_08305 PF01979 Amidohydrolase family J6598_08310 PF03956 Lysine exporter LysO J6598_08315 PF00005 ABC transporter J6598_08320 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_08325 PF00528 Binding-protein-dependent transport system inner membrane component J6598_08330 PF00528 Binding-protein-dependent transport system inner membrane component J6598_08335 PF00849 RNA pseudouridylate synthase J6598_08345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6598_08350 PF04209 homogentisate 1,2-dioxygenase J6598_08360 PF02798 Glutathione S-transferase, N-terminal domain J6598_08360 PF14497 Glutathione S-transferase, C-terminal domain J6598_08365 PF00574 Clp protease J6598_08375 PF13537 Glutamine amidotransferase domain J6598_08375 PF00733 Asparagine synthase J6598_08385 PF02254 TrkA-N domain J6598_08385 PF00999 Sodium/hydrogen exchanger family J6598_08390 PF13344 Haloacid dehalogenase-like hydrolase J6598_08395 PF00962 Adenosine/AMP deaminase J6598_08400 PF08240 Alcohol dehydrogenase GroES-like domain J6598_08400 PF00107 Zinc-binding dehydrogenase J6598_08405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6598_08410 PF03471 Transporter associated domain J6598_08410 PF03741 Integral membrane protein TerC family J6598_08420 PF02913 FAD linked oxidases, C-terminal domain J6598_08420 PF01565 FAD binding domain J6598_08420 PF13183 4Fe-4S dicluster domain J6598_08430 PF03061 Thioesterase superfamily J6598_08435 PF03880 DbpA RNA binding domain J6598_08435 PF00270 DEAD/DEAH box helicase J6598_08435 PF00271 Helicase conserved C-terminal domain J6598_08460 PF01966 HD domain J6598_08465 PF00072 Response regulator receiver domain J6598_08475 PF00361 Proton-conducting membrane transporter J6598_08480 PF00361 Proton-conducting membrane transporter J6598_08485 PF00361 Proton-conducting membrane transporter J6598_08485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J6598_08490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J6598_08495 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J6598_08500 PF12838 4Fe-4S dicluster domain J6598_08505 PF00146 NADH dehydrogenase J6598_08510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J6598_08510 PF00384 Molybdopterin oxidoreductase J6598_08510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6598_08515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J6598_08515 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J6598_08525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J6598_08525 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J6598_08530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J6598_08535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J6598_08555 PF00326 Prolyl oligopeptidase family J6598_08555 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J6598_08560 PF00593 TonB dependent receptor J6598_08560 PF07715 TonB-dependent Receptor Plug Domain J6598_08565 PF13677 Membrane MotB of proton-channel complex MotA/MotB J6598_08565 PF00691 OmpA family J6598_08570 PF01618 MotA/TolQ/ExbB proton channel family J6598_08580 PF00239 Resolvase, N terminal domain J6598_08580 PF02796 Helix-turn-helix domain of resolvase J6598_08610 PF04536 TPM domain J6598_08620 PF03411 Penicillin-insensitive murein endopeptidase J6598_08625 PF00528 Binding-protein-dependent transport system inner membrane component J6598_08630 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_08635 PF00528 Binding-protein-dependent transport system inner membrane component J6598_08640 PF00005 ABC transporter J6598_08650 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J6598_08655 PF00248 Aldo/keto reductase family J6598_08665 PF00106 short chain dehydrogenase J6598_08670 PF01212 Beta-eliminating lyase J6598_08680 PF00072 Response regulator receiver domain J6598_08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_08685 PF03466 LysR substrate binding domain J6598_08690 PF00563 EAL domain J6598_08690 PF00990 Diguanylate cyclase, GGDEF domain J6598_08690 PF03707 Bacterial signalling protein N terminal repeat J6598_08690 PF13188 PAS domain J6598_08695 PF03806 AbgT putative transporter family J6598_08700 PF00881 Nitroreductase family J6598_08715 PF07690 Major Facilitator Superfamily J6598_08720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_08720 PF03466 LysR substrate binding domain J6598_08725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_08725 PF03466 LysR substrate binding domain J6598_08730 PF00925 GTP cyclohydrolase II J6598_08735 PF02224 Cytidylate kinase J6598_08740 PF00575 S1 RNA binding domain J6598_08745 PF00216 Bacterial DNA-binding protein J6598_08755 PF18073 Rubredoxin metal binding domain J6598_08760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J6598_08775 PF06508 Queuosine biosynthesis protein QueC J6598_08780 PF04055 Radical SAM superfamily J6598_08785 PF12843 Putative quorum-sensing-regulated virulence factor J6598_08790 PF01923 Cobalamin adenosyltransferase J6598_08795 PF00816 H-NS histone family J6598_08800 PF03553 Na+/H+ antiporter family J6598_08805 PF00265 Thymidine kinase J6598_08815 PF10722 Putative bacterial sensory transduction regulator J6598_08825 PF13662 Toprim domain J6598_08825 PF02132 RecR protein J6598_08830 PF00183 Hsp90 protein J6598_08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_08835 PF00005 ABC transporter J6598_08840 PF00005 ABC transporter J6598_08840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_08845 PF12911 N-terminal TM domain of oligopeptide transport permease C J6598_08845 PF00528 Binding-protein-dependent transport system inner membrane component J6598_08850 PF00528 Binding-protein-dependent transport system inner membrane component J6598_08855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_08860 PF02954 Bacterial regulatory protein, Fis family J6598_08860 PF00158 Sigma-54 interaction domain J6598_08865 PF04012 PspA/IM30 family J6598_08870 PF06667 Phage shock protein B J6598_08880 PF04317 YcjX-like family, DUF463 J6598_08885 PF05128 Domain of unknown function (DUF697) J6598_08890 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J6598_08895 PF01329 Pterin 4 alpha carbinolamine dehydratase J6598_08905 PF00158 Sigma-54 interaction domain J6598_08905 PF18024 Helix-turn-helix domain J6598_08915 PF17152 Periplasmic sensor domain J6598_08915 PF00990 Diguanylate cyclase, GGDEF domain J6598_08920 PF00691 OmpA family J6598_08925 PF03741 Integral membrane protein TerC family J6598_08935 PF08891 YfcL protein J6598_08940 PF00501 AMP-binding enzyme J6598_08945 PF01053 Cys/Met metabolism PLP-dependent enzyme J6598_08960 PF13460 NAD(P)H-binding J6598_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_08965 PF03466 LysR substrate binding domain J6598_08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_08970 PF03466 LysR substrate binding domain J6598_08975 PF07690 Major Facilitator Superfamily J6598_08980 PF02678 Pirin J6598_08980 PF05726 Pirin C-terminal cupin domain J6598_08985 PF00857 Isochorismatase family J6598_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_08990 PF03466 LysR substrate binding domain J6598_08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_08995 PF03466 LysR substrate binding domain J6598_09000 PF08267 Cobalamin-independent synthase, N-terminal domain J6598_09000 PF01717 Cobalamin-independent synthase, Catalytic domain J6598_09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_09010 PF03466 LysR substrate binding domain J6598_09015 PF00232 Glycosyl hydrolase family 1 J6598_09020 PF18381 YcaO cyclodehydratase C-terminal domain J6598_09020 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J6598_09025 PF01226 Formate/nitrite transporter J6598_09030 PF02901 Pyruvate formate lyase-like J6598_09030 PF01228 Glycine radical J6598_09035 PF03692 Putative zinc- or iron-chelating domain J6598_09050 PF00343 Carbohydrate phosphorylase J6598_09055 PF00939 Sodium:sulfate symporter transmembrane region J6598_09060 PF00085 Thioredoxin J6598_09065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J6598_09065 PF00512 His Kinase A (phospho-acceptor) domain J6598_09065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_09065 PF00672 HAMP domain J6598_09065 PF00072 Response regulator receiver domain J6598_09065 PF01627 Hpt domain J6598_09070 PF00664 ABC transporter transmembrane region J6598_09070 PF00005 ABC transporter J6598_09075 PF00005 ABC transporter J6598_09075 PF00664 ABC transporter transmembrane region J6598_09100 PF08543 Phosphomethylpyrimidine kinase J6598_09105 PF00465 Iron-containing alcohol dehydrogenase J6598_09120 PF13673 Acetyltransferase (GNAT) domain J6598_09130 PF00285 Citrate synthase, C-terminal domain J6598_09140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J6598_09145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J6598_09150 PF02910 Fumarate reductase flavoprotein C-term J6598_09150 PF00890 FAD binding domain J6598_09155 PF13085 2Fe-2S iron-sulfur cluster binding domain J6598_09160 PF16870 2-oxoglutarate dehydrogenase C-terminal J6598_09160 PF00676 Dehydrogenase E1 component J6598_09160 PF02779 Transketolase, pyrimidine binding domain J6598_09160 PF16078 2-oxoglutarate dehydrogenase N-terminus J6598_09165 PF00364 Biotin-requiring enzyme J6598_09165 PF02817 e3 binding domain J6598_09165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6598_09170 PF08442 ATP-grasp domain J6598_09170 PF00549 CoA-ligase J6598_09175 PF00549 CoA-ligase J6598_09175 PF02629 CoA binding domain J6598_09185 PF01266 FAD dependent oxidoreductase J6598_09190 PF00528 Binding-protein-dependent transport system inner membrane component J6598_09195 PF00005 ABC transporter J6598_09205 PF00392 Bacterial regulatory proteins, gntR family J6598_09205 PF07702 UTRA domain J6598_09210 PF00266 Aminotransferase class-V J6598_09215 PF00202 Aminotransferase class-III J6598_09235 PF03918 Cytochrome C biogenesis protein J6598_09240 PF08534 Redoxin J6598_09245 PF01578 Cytochrome C assembly protein J6598_09245 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J6598_09250 PF03916 Polysulphide reductase, NrfD J6598_09255 PF00037 4Fe-4S binding domain J6598_09255 PF13247 4Fe-4S dicluster domain J6598_09260 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) J6598_09260 PF13435 Cytochrome c554 and c-prime J6598_09265 PF02335 Cytochrome c552 J6598_09275 PF02754 Cysteine-rich domain J6598_09275 PF13183 4Fe-4S dicluster domain J6598_09280 PF00890 FAD binding domain J6598_09285 PF01266 FAD dependent oxidoreductase J6598_09285 PF04324 BFD-like [2Fe-2S] binding domain J6598_09290 PF02810 SEC-C motif J6598_09295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_09295 PF00672 HAMP domain J6598_09295 PF17200 Single Cache domain 2 J6598_09300 PF00480 ROK family J6598_09300 PF01047 MarR family J6598_09305 PF03942 DTW domain J6598_09310 PF01925 Sulfite exporter TauE/SafE J6598_09315 PF03466 LysR substrate binding domain J6598_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_09325 PF12833 Helix-turn-helix domain J6598_09325 PF14525 AraC-binding-like domain J6598_09330 PF11398 Protein of unknown function (DUF2813) J6598_09340 PF00128 Alpha amylase, catalytic domain J6598_09340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J6598_09380 PF02789 Cytosol aminopeptidase family, N-terminal domain J6598_09380 PF00883 Cytosol aminopeptidase family, catalytic domain J6598_09385 PF13419 Haloacid dehalogenase-like hydrolase J6598_09400 PF01207 Dihydrouridine synthase (Dus) J6598_09405 PF04304 Protein of unknown function (DUF454) J6598_09410 PF00156 Phosphoribosyl transferase domain J6598_09415 PF12169 DNA polymerase III subunits gamma and tau domain III J6598_09415 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J6598_09415 PF12170 DNA polymerase III tau subunit V interacting with alpha J6598_09420 PF02575 YbaB/EbfC DNA-binding family J6598_09425 PF01261 Xylose isomerase-like TIM barrel J6598_09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_09430 PF03466 LysR substrate binding domain J6598_09440 PF03279 Bacterial lipid A biosynthesis acyltransferase J6598_09445 PF03279 Bacterial lipid A biosynthesis acyltransferase J6598_09460 PF00990 Diguanylate cyclase, GGDEF domain J6598_09470 PF03104 DNA polymerase family B, exonuclease domain J6598_09470 PF00136 DNA polymerase family B J6598_09485 PF01863 Protein of unknown function DUF45 J6598_09500 PF03606 C4-dicarboxylate anaerobic carrier J6598_09515 PF01266 FAD dependent oxidoreductase J6598_09515 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J6598_09520 PF02801 Beta-ketoacyl synthase, C-terminal domain J6598_09520 PF00109 Beta-ketoacyl synthase, N-terminal domain J6598_09525 PF06826 Predicted Permease Membrane Region J6598_09525 PF02080 TrkA-C domain J6598_09535 PF04851 Type III restriction enzyme, res subunit J6598_09535 PF00271 Helicase conserved C-terminal domain J6598_09535 PF17757 UvrB interaction domain J6598_09535 PF02151 UvrB/uvrC motif J6598_09535 PF12344 Ultra-violet resistance protein B J6598_09545 PF09335 SNARE associated Golgi protein J6598_09550 PF02600 Disulfide bond formation protein DsbB J6598_09555 PF06450 Bacterial Na+/H+ antiporter B (NhaB) J6598_09560 PF00392 Bacterial regulatory proteins, gntR family J6598_09560 PF07840 FadR C-terminal domain J6598_09570 PF07152 YaeQ protein J6598_09580 PF00717 Peptidase S24-like J6598_09580 PF01381 Helix-turn-helix J6598_09695 PF08461 Ribonuclease R winged-helix domain J6598_09700 PF11985 Protein of unknown function (DUF3486) J6598_09705 PF03237 Terminase-like family J6598_09710 PF06074 Protein of unknown function (DUF935) J6598_09750 PF10123 Mu-like prophage I protein J6598_09755 PF10124 Mu-like prophage major head subunit gpT J6598_09860 PF02954 Bacterial regulatory protein, Fis family J6598_09860 PF13188 PAS domain J6598_09860 PF00158 Sigma-54 interaction domain J6598_09890 PF01554 MatE J6598_09895 PF06786 Uncharacterised protein family (UPF0253) J6598_09900 PF00677 Lumazine binding domain J6598_09910 PF13419 Haloacid dehalogenase-like hydrolase J6598_09915 PF02222 ATP-grasp domain J6598_09915 PF01370 NAD dependent epimerase/dehydratase family J6598_09920 PF00892 EamA-like transporter family J6598_09925 PF02525 Flavodoxin-like fold J6598_09950 PF17783 CvfB-like winged helix domain J6598_09950 PF13509 S1 domain J6598_09960 PF04269 Protein of unknown function, DUF440 J6598_09965 PF00912 Transglycosylase J6598_09970 PF04269 Protein of unknown function, DUF440 J6598_09975 PF03776 Septum formation topological specificity factor MinE J6598_09980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J6598_09985 PF05209 Septum formation inhibitor MinC, N-terminal domain J6598_09985 PF03775 Septum formation inhibitor MinC, C-terminal domain J6598_09990 PF05166 YcgL domain J6598_09995 PF03313 Serine dehydratase alpha chain J6598_09995 PF03315 Serine dehydratase beta chain J6598_10000 PF03313 Serine dehydratase alpha chain J6598_10000 PF03315 Serine dehydratase beta chain J6598_10005 PF06865 Pyrimidine/purine nucleoside phosphorylase J6598_10010 PF00375 Sodium:dicarboxylate symporter family J6598_10015 PF00365 Phosphofructokinase J6598_10020 PF00121 Triosephosphate isomerase J6598_10025 PF02698 DUF218 domain J6598_10030 PF13847 Methyltransferase domain J6598_10035 PF03882 MukF winged-helix domain J6598_10035 PF17193 MukF C-terminal domain J6598_10035 PF17192 MukF middle domain J6598_10040 PF04288 MukE-like family J6598_10045 PF04310 MukB N-terminal J6598_10045 PF16330 MukB hinge domain J6598_10050 PF03330 Lytic transglycolase J6598_10065 PF01327 Polypeptide deformylase J6598_10095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6598_10095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6598_10100 PF00291 Pyridoxal-phosphate dependent enzyme J6598_10105 PF07687 Peptidase dimerisation domain J6598_10105 PF01546 Peptidase family M20/M25/M40 J6598_10110 PF01979 Amidohydrolase family J6598_10115 PF00696 Amino acid kinase family J6598_10120 PF00892 EamA-like transporter family J6598_10125 PF01699 Sodium/calcium exchanger protein J6598_10130 PF02625 XdhC and CoxI family J6598_10130 PF13478 XdhC Rossmann domain J6598_10140 PF12804 MobA-like NTP transferase domain J6598_10145 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_10145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J6598_10150 PF01979 Amidohydrolase family J6598_10155 PF00941 FAD binding domain in molybdopterin dehydrogenase J6598_10160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J6598_10160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J6598_10160 PF01799 [2Fe-2S] binding domain J6598_10165 PF00860 Permease family J6598_10170 PF01979 Amidohydrolase family J6598_10175 PF00860 Permease family J6598_10180 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J6598_10180 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J6598_10185 PF03450 CO dehydrogenase flavoprotein C-terminal domain J6598_10185 PF00941 FAD binding domain in molybdopterin dehydrogenase J6598_10190 PF00111 2Fe-2S iron-sulfur cluster binding domain J6598_10190 PF01799 [2Fe-2S] binding domain J6598_10195 PF05433 Glycine zipper 2TM domain J6598_10205 PF03606 C4-dicarboxylate anaerobic carrier J6598_10210 PF00501 AMP-binding enzyme J6598_10210 PF13193 AMP-binding enzyme C-terminal domain J6598_10215 PF00990 Diguanylate cyclase, GGDEF domain J6598_10215 PF08448 PAS fold J6598_10225 PF01502 Phosphoribosyl-AMP cyclohydrolase J6598_10225 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J6598_10230 PF00977 Histidine biosynthesis protein J6598_10235 PF00977 Histidine biosynthesis protein J6598_10240 PF00117 Glutamine amidotransferase class-I J6598_10245 PF00475 Imidazoleglycerol-phosphate dehydratase J6598_10245 PF08645 Polynucleotide kinase 3 phosphatase J6598_10250 PF00155 Aminotransferase class I and II J6598_10255 PF00815 Histidinol dehydrogenase J6598_10260 PF01634 ATP phosphoribosyltransferase J6598_10260 PF08029 HisG, C-terminal domain J6598_10270 PF13307 Helicase C-terminal domain J6598_10270 PF04851 Type III restriction enzyme, res subunit J6598_10275 PF00814 Glycoprotease family J6598_10285 PF12697 Alpha/beta hydrolase family J6598_10290 PF13193 AMP-binding enzyme C-terminal domain J6598_10290 PF00501 AMP-binding enzyme J6598_10295 PF00570 HRDC domain J6598_10295 PF01612 3'-5' exonuclease J6598_10300 PF00753 Metallo-beta-lactamase superfamily J6598_10310 PF00586 AIR synthase related protein, N-terminal domain J6598_10310 PF02769 AIR synthase related protein, C-terminal domain J6598_10320 PF10672 S-adenosylmethionine-dependent methyltransferase J6598_10320 PF17785 PUA-like domain J6598_10325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_10325 PF00672 HAMP domain J6598_10325 PF12729 Four helix bundle sensory module for signal transduction J6598_10330 PF00708 Acylphosphatase J6598_10340 PF09334 tRNA synthetases class I (M) J6598_10340 PF01588 Putative tRNA binding domain J6598_10340 PF08264 Anticodon-binding domain of tRNA J6598_10345 PF10609 NUBPL iron-transfer P-loop NTPase J6598_10350 PF00485 Phosphoribulokinase / Uridine kinase family J6598_10355 PF00692 dUTPase J6598_10360 PF01384 Phosphate transporter family J6598_10365 PF06945 Protein of unknown function (DUF1289) J6598_10370 PF06725 3D domain J6598_10370 PF03562 MltA specific insert domain J6598_10380 PF00111 2Fe-2S iron-sulfur cluster binding domain J6598_10385 PF00268 Ribonucleotide reductase, small chain J6598_10390 PF00317 Ribonucleotide reductase, all-alpha domain J6598_10390 PF02867 Ribonucleotide reductase, barrel domain J6598_10390 PF03477 ATP cone domain J6598_10395 PF13419 Haloacid dehalogenase-like hydrolase J6598_10405 PF03989 DNA gyrase C-terminal domain, beta-propeller J6598_10405 PF00521 DNA gyrase/topoisomerase IV, subunit A J6598_10410 PF00128 Alpha amylase, catalytic domain J6598_10420 PF04055 Radical SAM superfamily J6598_10430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6598_10430 PF03129 Anticodon binding domain J6598_10430 PF02824 TGS domain J6598_10430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J6598_10435 PF00707 Translation initiation factor IF-3, C-terminal domain J6598_10435 PF05198 Translation initiation factor IF-3, N-terminal domain J6598_10440 PF01632 Ribosomal protein L35 J6598_10445 PF00453 Ribosomal protein L20 J6598_10450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J6598_10450 PF01409 tRNA synthetases class II core domain (F) J6598_10455 PF03483 B3/4 domain J6598_10455 PF03484 tRNA synthetase B5 domain J6598_10455 PF03147 Ferredoxin-fold anticodon binding domain J6598_10455 PF01588 Putative tRNA binding domain J6598_10455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J6598_10460 PF00216 Bacterial DNA-binding protein J6598_10465 PF00072 Response regulator receiver domain J6598_10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_10465 PF00512 His Kinase A (phospho-acceptor) domain J6598_10465 PF09456 RcsC Alpha-Beta-Loop (ABL) J6598_10480 PF02146 Sir2 family J6598_10490 PF00563 EAL domain J6598_10490 PF00990 Diguanylate cyclase, GGDEF domain J6598_10490 PF03707 Bacterial signalling protein N terminal repeat J6598_10495 PF00356 Bacterial regulatory proteins, lacI family J6598_10500 PF00294 pfkB family carbohydrate kinase J6598_10505 PF13407 Periplasmic binding protein domain J6598_10510 PF02653 Branched-chain amino acid transport system / permease component J6598_10515 PF00005 ABC transporter J6598_10520 PF05025 RbsD / FucU transport protein family J6598_10525 PF00043 Glutathione S-transferase, C-terminal domain J6598_10525 PF02798 Glutathione S-transferase, N-terminal domain J6598_10535 PF13416 Bacterial extracellular solute-binding protein J6598_10540 PF00528 Binding-protein-dependent transport system inner membrane component J6598_10545 PF00528 Binding-protein-dependent transport system inner membrane component J6598_10550 PF08402 TOBE domain J6598_10550 PF00005 ABC transporter J6598_10565 PF01171 PP-loop family J6598_10570 PF00582 Universal stress protein family J6598_10575 PF13545 Crp-like helix-turn-helix domain J6598_10575 PF00027 Cyclic nucleotide-binding domain J6598_10590 PF00403 Heavy-metal-associated domain J6598_10600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J6598_10600 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J6598_10615 PF00115 Cytochrome C and Quinol oxidase polypeptide I J6598_10625 PF13185 GAF domain J6598_10630 PF04352 ProQ/FINO family J6598_10630 PF17516 ProQ C-terminal domain J6598_10635 PF11818 C-terminal domain of tail specific protease (DUF3340) J6598_10635 PF00595 PDZ domain J6598_10635 PF03572 Peptidase family S41 J6598_10635 PF17804 Tail specific protease N-terminal domain J6598_10640 PF01433 Peptidase family M1 domain J6598_10640 PF11940 Domain of unknown function (DUF3458) Ig-like fold J6598_10640 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J6598_10650 PF05088 Bacterial NAD-glutamate dehydrogenase J6598_10655 PF01180 Dihydroorotate dehydrogenase J6598_10660 PF07126 Cell-division protein ZapC J6598_10670 PF01197 Ribosomal protein L31 J6598_10675 PF00444 Ribosomal protein L36 J6598_10680 PF01170 Putative RNA methylase family UPF0020 J6598_10680 PF10672 S-adenosylmethionine-dependent methyltransferase J6598_10680 PF02926 THUMP domain J6598_10690 PF00005 ABC transporter J6598_10690 PF16326 ABC transporter C-terminal domain J6598_10690 PF12848 ABC transporter J6598_10695 PF04957 Ribosome modulation factor J6598_10700 PF07977 FabA-like domain J6598_10705 PF05362 Lon protease (S16) C-terminal proteolytic domain J6598_10705 PF13654 AAA domain J6598_10735 PF07130 YebG protein J6598_10740 PF01674 Lipase (class 2) J6598_10745 PF00106 short chain dehydrogenase J6598_10770 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain J6598_10770 PF06974 Protein of unknown function (DUF1298) J6598_10785 PF03972 MmgE/PrpD family J6598_10790 PF00285 Citrate synthase, C-terminal domain J6598_10805 PF04403 Paraquat-inducible protein A J6598_10810 PF02470 MlaD protein J6598_10815 PF01189 16S rRNA methyltransferase RsmB/F J6598_10815 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF J6598_10815 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF J6598_10825 PF00589 Phage integrase family J6598_10830 PF01026 TatD related DNase J6598_10835 PF09115 DNA polymerase III, delta subunit, C terminal J6598_10840 PF02223 Thymidylate kinase J6598_10845 PF02618 YceG-like family J6598_10850 PF01063 Amino-transferase class IV J6598_10855 PF00109 Beta-ketoacyl synthase, N-terminal domain J6598_10855 PF02801 Beta-ketoacyl synthase, C-terminal domain J6598_10860 PF00550 Phosphopantetheine attachment site J6598_10870 PF00698 Acyl transferase domain J6598_10875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J6598_10875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J6598_10880 PF02504 Fatty acid synthesis protein J6598_10885 PF01783 Ribosomal L32p protein family J6598_10890 PF02620 Large ribosomal RNA subunit accumulation protein YceD J6598_10895 PF02545 Maf-like protein J6598_10900 PF13419 Haloacid dehalogenase-like hydrolase J6598_10905 PF00849 RNA pseudouridylate synthase J6598_10905 PF01479 S4 domain J6598_10910 PF12111 Polyribonucleotide phosphorylase C terminal J6598_10910 PF10150 Ribonuclease E/G family J6598_10910 PF00575 S1 RNA binding domain J6598_10915 PF02378 Phosphotransferase system, EIIC J6598_10915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6598_10920 PF00294 pfkB family carbohydrate kinase J6598_10925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6598_10925 PF00381 PTS HPr component phosphorylation site J6598_10930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J6598_10930 PF00356 Bacterial regulatory proteins, lacI family J6598_10935 PF03222 Tryptophan/tyrosine permease family J6598_10950 PF01124 MAPEG family J6598_10960 PF00271 Helicase conserved C-terminal domain J6598_10960 PF00270 DEAD/DEAH box helicase J6598_10970 PF01264 Chorismate synthase J6598_10975 PF05175 Methyltransferase small domain J6598_10980 PF01713 Smr domain J6598_10985 PF00990 Diguanylate cyclase, GGDEF domain J6598_10985 PF08448 PAS fold J6598_10990 PF00300 Histidine phosphatase superfamily (branch 1) J6598_11005 PF03831 PhnA domain J6598_11005 PF08274 PhnA Zinc-Ribbon J6598_11015 PF04715 Anthranilate synthase component I, N terminal region J6598_11015 PF00425 chorismate binding enzyme J6598_11020 PF00293 NUDIX domain J6598_11025 PF03222 Tryptophan/tyrosine permease family J6598_11030 PF00375 Sodium:dicarboxylate symporter family J6598_11035 PF00570 HRDC domain J6598_11035 PF00271 Helicase conserved C-terminal domain J6598_11035 PF00270 DEAD/DEAH box helicase J6598_11035 PF09382 RQC domain J6598_11035 PF16124 RecQ zinc-binding J6598_11040 PF08298 PrkA AAA domain J6598_11040 PF06798 PrkA serine protein kinase C-terminal domain J6598_11045 PF04285 Protein of unknown function (DUF444) J6598_11050 PF04293 SpoVR like protein J6598_11055 PF00378 Enoyl-CoA hydratase/isomerase J6598_11055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J6598_11055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J6598_11060 PF02803 Thiolase, C-terminal domain J6598_11060 PF00108 Thiolase, N-terminal domain J6598_11065 PF07726 ATPase family associated with various cellular activities (AAA) J6598_11065 PF17863 AAA lid domain J6598_11070 PF01882 Protein of unknown function DUF58 J6598_11085 PF13519 von Willebrand factor type A domain J6598_11095 PF04542 Sigma-70 region 2 J6598_11095 PF08281 Sigma-70, region 4 J6598_11105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J6598_11110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J6598_11115 PF08668 HDOD domain J6598_11115 PF00563 EAL domain J6598_11120 PF00108 Thiolase, N-terminal domain J6598_11120 PF02803 Thiolase, C-terminal domain J6598_11125 PF00376 MerR family regulatory protein J6598_11125 PF09278 MerR, DNA binding J6598_11130 PF01386 Ribosomal L25p family J6598_11140 PF11898 Domain of unknown function (DUF3418) J6598_11140 PF00270 DEAD/DEAH box helicase J6598_11140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J6598_11140 PF00271 Helicase conserved C-terminal domain J6598_11140 PF04408 Helicase associated domain (HA2) J6598_11145 PF00571 CBS domain J6598_11145 PF02272 DHHA1 domain J6598_11145 PF01743 Poly A polymerase head domain J6598_11145 PF01368 DHH family J6598_11150 PF01966 HD domain J6598_11160 PF00884 Sulfatase J6598_11165 PF17863 AAA lid domain J6598_11165 PF07726 ATPase family associated with various cellular activities (AAA) J6598_11180 PF07584 Aerotolerance regulator N-terminal J6598_11180 PF13519 von Willebrand factor type A domain J6598_11185 PF07584 Aerotolerance regulator N-terminal J6598_11185 PF13519 von Willebrand factor type A domain J6598_11195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_11195 PF03466 LysR substrate binding domain J6598_11200 PF03781 Sulfatase-modifying factor enzyme 1 J6598_11210 PF13186 Iron-sulfur cluster-binding domain J6598_11210 PF04055 Radical SAM superfamily J6598_11215 PF00929 Exonuclease J6598_11215 PF08411 Exonuclease C-terminal J6598_11230 PF03788 LrgA family J6598_11235 PF04172 LrgB-like family J6598_11240 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region J6598_11240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J6598_11250 PF01212 Beta-eliminating lyase J6598_11260 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J6598_11265 PF01266 FAD dependent oxidoreductase J6598_11270 PF01118 Semialdehyde dehydrogenase, NAD binding domain J6598_11270 PF02774 Semialdehyde dehydrogenase, dimerisation domain J6598_11275 PF02634 FdhD/NarQ family J6598_11280 PF01590 GAF domain J6598_11280 PF00158 Sigma-54 interaction domain J6598_11280 PF02954 Bacterial regulatory protein, Fis family J6598_11295 PF12800 4Fe-4S binding domain J6598_11295 PF13247 4Fe-4S dicluster domain J6598_11305 PF02705 K+ potassium transporter J6598_11310 PF00037 4Fe-4S binding domain J6598_11310 PF12798 4Fe-4S binding domain J6598_11315 PF00361 Proton-conducting membrane transporter J6598_11320 PF00146 NADH dehydrogenase J6598_11325 PF00374 Nickel-dependent hydrogenase J6598_11325 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J6598_11325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J6598_11330 PF12838 4Fe-4S dicluster domain J6598_11335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J6598_11340 PF07450 Formate hydrogenlyase maturation protein HycH J6598_11345 PF01750 Hydrogenase maturation protease J6598_11355 PF12390 Selenocysteine synthase N terminal J6598_11355 PF03841 L-seryl-tRNA selenium transferase J6598_11360 PF00009 Elongation factor Tu GTP binding domain J6598_11360 PF03144 Elongation factor Tu domain 2 J6598_11360 PF09105 Elongation factor SelB, winged helix J6598_11360 PF09106 Elongation factor SelB, winged helix J6598_11360 PF09107 Elongation factor SelB, winged helix J6598_11365 PF00708 Acylphosphatase J6598_11365 PF17788 HypF Kae1-like domain J6598_11365 PF01300 Telomere recombination J6598_11365 PF07503 HypF finger J6598_11370 PF01455 HupF/HypC family J6598_11375 PF01924 Hydrogenase formation hypA family J6598_11380 PF00586 AIR synthase related protein, N-terminal domain J6598_11380 PF02769 AIR synthase related protein, C-terminal domain J6598_11385 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA J6598_11390 PF02492 CobW/HypB/UreG, nucleotide-binding domain J6598_11395 PF00005 ABC transporter J6598_11400 PF00005 ABC transporter J6598_11400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_11405 PF00528 Binding-protein-dependent transport system inner membrane component J6598_11405 PF12911 N-terminal TM domain of oligopeptide transport permease C J6598_11410 PF00528 Binding-protein-dependent transport system inner membrane component J6598_11415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_11420 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE J6598_11425 PF01750 Hydrogenase maturation protease J6598_11430 PF00374 Nickel-dependent hydrogenase J6598_11435 PF03916 Polysulphide reductase, NrfD J6598_11440 PF13247 4Fe-4S dicluster domain J6598_11445 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal J6598_11445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J6598_11450 PF00360 Phytochrome region J6598_11450 PF00990 Diguanylate cyclase, GGDEF domain J6598_11450 PF01590 GAF domain J6598_11450 PF00563 EAL domain J6598_11460 PF00534 Glycosyl transferases group 1 J6598_11460 PF13439 Glycosyltransferase Family 4 J6598_11525 PF13439 Glycosyltransferase Family 4 J6598_11525 PF00534 Glycosyl transferases group 1 J6598_11530 PF03552 Cellulose synthase J6598_11530 PF07238 PilZ domain J6598_11530 PF00535 Glycosyl transferase family 2 J6598_11535 PF02397 Bacterial sugar transferase J6598_11540 PF00534 Glycosyl transferases group 1 J6598_11545 PF00211 Adenylate and Guanylate cyclase catalytic domain J6598_11545 PF00072 Response regulator receiver domain J6598_11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_11575 PF00512 His Kinase A (phospho-acceptor) domain J6598_11575 PF09308 LuxQ, periplasmic J6598_11575 PF00072 Response regulator receiver domain J6598_11585 PF01925 Sulfite exporter TauE/SafE J6598_11590 PF13520 Amino acid permease J6598_11600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J6598_11600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J6598_11605 PF00378 Enoyl-CoA hydratase/isomerase J6598_11610 PF00378 Enoyl-CoA hydratase/isomerase J6598_11615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6598_11615 PF02770 Acyl-CoA dehydrogenase, middle domain J6598_11615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6598_11620 PF02770 Acyl-CoA dehydrogenase, middle domain J6598_11620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6598_11620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6598_11625 PF01039 Carboxyl transferase domain J6598_11630 PF00378 Enoyl-CoA hydratase/isomerase J6598_11635 PF00364 Biotin-requiring enzyme J6598_11635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6598_11635 PF02785 Biotin carboxylase C-terminal domain J6598_11635 PF00289 Biotin carboxylase, N-terminal domain J6598_11640 PF00682 HMGL-like J6598_11645 PF09278 MerR, DNA binding J6598_11645 PF00376 MerR family regulatory protein J6598_11660 PF01184 GPR1/FUN34/yaaH family J6598_11665 PF06167 Glucose-regulated metallo-peptidase M90 J6598_11675 PF01235 Sodium:alanine symporter family J6598_11680 PF00378 Enoyl-CoA hydratase/isomerase J6598_11695 PF04341 Protein of unknown function, DUF485 J6598_11700 PF00474 Sodium:solute symporter family J6598_11705 PF00005 ABC transporter J6598_11705 PF12848 ABC transporter J6598_11710 PF13145 PPIC-type PPIASE domain J6598_11715 PF00216 Bacterial DNA-binding protein J6598_11720 PF00004 ATPase family associated with various cellular activities (AAA) J6598_11720 PF05362 Lon protease (S16) C-terminal proteolytic domain J6598_11720 PF02190 ATP-dependent protease La (LON) substrate-binding domain J6598_11725 PF07724 AAA domain (Cdc48 subfamily) J6598_11725 PF10431 C-terminal, D2-small domain, of ClpB protein J6598_11725 PF06689 ClpX C4-type zinc finger J6598_11730 PF00574 Clp protease J6598_11735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6598_11735 PF05697 Bacterial trigger factor protein (TF) J6598_11735 PF05698 Bacterial trigger factor protein (TF) C-terminus J6598_11750 PF12704 MacB-like periplasmic core domain J6598_11750 PF02687 FtsX-like permease family J6598_11755 PF00005 ABC transporter J6598_11760 PF02687 FtsX-like permease family J6598_11760 PF12704 MacB-like periplasmic core domain J6598_11770 PF02559 CarD-like/TRCF domain J6598_11770 PF00270 DEAD/DEAH box helicase J6598_11770 PF00271 Helicase conserved C-terminal domain J6598_11770 PF17757 UvrB interaction domain J6598_11770 PF03461 TRCF domain J6598_11775 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J6598_11780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_11785 PF00892 EamA-like transporter family J6598_11795 PF00300 Histidine phosphatase superfamily (branch 1) J6598_11800 PF05193 Peptidase M16 inactive domain J6598_11800 PF16187 Middle or third domain of peptidase_M16 J6598_11800 PF00675 Insulinase (Peptidase family M16) J6598_11805 PF05724 Thiopurine S-methyltransferase (TPMT) J6598_11820 PF02805 Metal binding domain of Ada J6598_11820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6598_11820 PF12833 Helix-turn-helix domain J6598_11820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6598_11825 PF13476 AAA domain J6598_11840 PF00117 Glutamine amidotransferase class-I J6598_11840 PF00958 GMP synthase C terminal domain J6598_11840 PF02540 NAD synthase J6598_11845 PF00571 CBS domain J6598_11845 PF00478 IMP dehydrogenase / GMP reductase domain J6598_11855 PF02601 Exonuclease VII, large subunit J6598_11855 PF13742 OB-fold nucleic acid binding domain J6598_11860 PF00392 Bacterial regulatory proteins, gntR family J6598_11860 PF07702 UTRA domain J6598_11865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6598_11865 PF02378 Phosphotransferase system, EIIC J6598_11865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6598_11870 PF01074 Glycosyl hydrolases family 38 N-terminal domain J6598_11870 PF09261 Alpha mannosidase middle domain J6598_11870 PF07748 Glycosyl hydrolases family 38 C-terminal domain J6598_11875 PF07478 D-ala D-ala ligase C-terminus J6598_11875 PF01820 D-ala D-ala ligase N-terminus J6598_11885 PF00255 Glutathione peroxidase J6598_11890 PF00271 Helicase conserved C-terminal domain J6598_11890 PF00270 DEAD/DEAH box helicase J6598_11895 PF04055 Radical SAM superfamily J6598_11900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_11900 PF00672 HAMP domain J6598_11905 PF00793 DAHP synthetase I family J6598_11910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J6598_11915 PF00266 Aminotransferase class-V J6598_11920 PF00766 Electron transfer flavoprotein FAD-binding domain J6598_11920 PF01012 Electron transfer flavoprotein domain J6598_11925 PF01012 Electron transfer flavoprotein domain J6598_11935 PF01544 CorA-like Mg2+ transporter protein J6598_11940 PF11143 Protein of unknown function (DUF2919) J6598_11950 PF07273 Protein of unknown function (DUF1439) J6598_11960 PF00483 Nucleotidyl transferase J6598_11965 PF03707 Bacterial signalling protein N terminal repeat J6598_11965 PF00990 Diguanylate cyclase, GGDEF domain J6598_11965 PF00563 EAL domain J6598_11980 PF00294 pfkB family carbohydrate kinase J6598_11990 PF00762 Ferrochelatase J6598_11995 PF05191 Adenylate kinase, active site lid J6598_12000 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J6598_12005 PF00156 Phosphoribosyl transferase domain J6598_12010 PF02674 Colicin V production protein J6598_12020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6598_12020 PF02403 Seryl-tRNA synthetase N-terminal domain J6598_12025 PF12002 MgsA AAA+ ATPase C terminal J6598_12025 PF16193 AAA C-terminal domain J6598_12025 PF00004 ATPase family associated with various cellular activities (AAA) J6598_12030 PF03548 Outer membrane lipoprotein carrier protein LolA J6598_12035 PF09397 Ftsk gamma domain J6598_12035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J6598_12035 PF17854 FtsK alpha domain J6598_12035 PF01580 FtsK/SpoIIIE family J6598_12040 PF01037 Lrp/AsnC ligand binding domain J6598_12045 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J6598_12045 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J6598_12050 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_12055 PF00990 Diguanylate cyclase, GGDEF domain J6598_12055 PF17158 Membrane-associated sensor, integral membrane domain J6598_12060 PF05433 Glycine zipper 2TM domain J6598_12065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J6598_12070 PF04377 Arginine-tRNA-protein transferase, C terminus J6598_12070 PF04376 Arginine-tRNA-protein transferase, N terminus J6598_12075 PF01176 Translation initiation factor 1A / IF-1 J6598_12080 PF00004 ATPase family associated with various cellular activities (AAA) J6598_12080 PF10431 C-terminal, D2-small domain, of ClpB protein J6598_12080 PF02861 Clp amino terminal domain, pathogenicity island component J6598_12080 PF17871 AAA lid domain J6598_12080 PF07724 AAA domain (Cdc48 subfamily) J6598_12085 PF02617 ATP-dependent Clp protease adaptor protein ClpS J6598_12090 PF00313 'Cold-shock' DNA-binding domain J6598_12095 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J6598_12095 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J6598_12115 PF00072 Response regulator receiver domain J6598_12115 PF00486 Transcriptional regulatory protein, C terminal J6598_12120 PF00512 His Kinase A (phospho-acceptor) domain J6598_12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_12120 PF00672 HAMP domain J6598_12130 PF03706 Lysylphosphatidylglycerol synthase TM region J6598_12130 PF09924 Uncharacterised conserved protein (DUF2156) J6598_12145 PF00239 Resolvase, N terminal domain J6598_12145 PF02796 Helix-turn-helix domain of resolvase J6598_12170 PF00916 Sulfate permease family J6598_12170 PF01740 STAS domain J6598_12225 PF14659 Phage integrase, N-terminal SAM-like domain J6598_12225 PF00589 Phage integrase family J6598_12225 PF13356 Arm DNA-binding domain J6598_12235 PF05154 TM2 domain J6598_12250 PF01367 5'-3' exonuclease, C-terminal SAM fold J6598_12250 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J6598_12250 PF00476 DNA polymerase family A J6598_12250 PF01612 3'-5' exonuclease J6598_12280 PF03350 Uncharacterized protein family, UPF0114 J6598_12295 PF03239 Iron permease FTR1 family J6598_12300 PF01593 Flavin containing amine oxidoreductase J6598_12320 PF07690 Major Facilitator Superfamily J6598_12325 PF03600 Citrate transporter J6598_12340 PF12704 MacB-like periplasmic core domain J6598_12340 PF02687 FtsX-like permease family J6598_12350 PF02308 MgtC family J6598_12365 PF00561 alpha/beta hydrolase fold J6598_12385 PF01625 Peptide methionine sulfoxide reductase J6598_12390 PF00696 Amino acid kinase family J6598_12390 PF00583 Acetyltransferase (GNAT) family J6598_12395 PF01842 ACT domain J6598_12395 PF00696 Amino acid kinase family J6598_12405 PF00884 Sulfatase J6598_12410 PF02016 LD-carboxypeptidase N-terminal domain J6598_12410 PF17676 LD-carboxypeptidase C-terminal domain J6598_12415 PF01734 Patatin-like phospholipase J6598_12420 PF17179 4Fe-4S dicluster domain J6598_12425 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B J6598_12425 PF00175 Oxidoreductase NAD-binding domain J6598_12430 PF13187 4Fe-4S dicluster domain J6598_12430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6598_12430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6598_12435 PF10414 Sirohaem synthase dimerisation region J6598_12435 PF14824 Sirohaem biosynthesis protein central J6598_12435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6598_12445 PF01906 Putative heavy-metal-binding J6598_12450 PF05036 Sporulation related domain J6598_12455 PF02875 Mur ligase family, glutamate ligase domain J6598_12455 PF08245 Mur ligase middle domain J6598_12460 PF01039 Carboxyl transferase domain J6598_12460 PF17848 Acetyl-coA carboxylase zinc finger domain J6598_12465 PF01416 tRNA pseudouridine synthase J6598_12475 PF01118 Semialdehyde dehydrogenase, NAD binding domain J6598_12475 PF02774 Semialdehyde dehydrogenase, dimerisation domain J6598_12480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6598_12480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6598_12480 PF11890 Domain of unknown function (DUF3410) J6598_12485 PF01569 PAP2 superfamily J6598_12490 PF00929 Exonuclease J6598_12495 PF03553 Na+/H+ antiporter family J6598_12495 PF13726 Na+-H+ antiporter family J6598_12500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J6598_12500 PF02769 AIR synthase related protein, C-terminal domain J6598_12500 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J6598_12505 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_12505 PF01464 Transglycosylase SLT domain J6598_12510 PF07191 zinc-ribbons J6598_12515 PF01926 50S ribosome-binding GTPase J6598_12515 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J6598_12520 PF13360 PQQ-like domain J6598_12525 PF09976 Tetratricopeptide repeat-like domain J6598_12530 PF13393 Histidyl-tRNA synthetase J6598_12530 PF03129 Anticodon binding domain J6598_12535 PF04551 GcpE protein J6598_12540 PF13464 Domain of unknown function (DUF4115) J6598_12550 PF04055 Radical SAM superfamily J6598_12555 PF00334 Nucleoside diphosphate kinase J6598_12560 PF12404 Peptidase J6598_12560 PF00883 Cytosol aminopeptidase family, catalytic domain J6598_12565 PF12404 Peptidase J6598_12565 PF00883 Cytosol aminopeptidase family, catalytic domain J6598_12570 PF00111 2Fe-2S iron-sulfur cluster binding domain J6598_12575 PF00012 Hsp70 protein J6598_12580 PF00226 DnaJ domain J6598_12580 PF07743 HSCB C-terminal oligomerisation domain J6598_12585 PF01521 Iron-sulphur cluster biosynthesis J6598_12590 PF01592 NifU-like N terminal domain J6598_12595 PF00266 Aminotransferase class-V J6598_12600 PF02082 Transcriptional regulator J6598_12605 PF00588 SpoU rRNA Methylase family J6598_12615 PF02036 SCP-2 sterol transfer family J6598_12620 PF01136 Peptidase family U32 J6598_12625 PF01136 Peptidase family U32 J6598_12630 PF07719 Tetratricopeptide repeat J6598_12630 PF13181 Tetratricopeptide repeat J6598_12640 PF07549 SecD/SecF GG Motif J6598_12640 PF02355 Protein export membrane protein J6598_12645 PF02355 Protein export membrane protein J6598_12645 PF07549 SecD/SecF GG Motif J6598_12645 PF13721 SecD export protein N-terminal TM region J6598_12650 PF02699 Preprotein translocase subunit J6598_12655 PF01702 Queuine tRNA-ribosyltransferase J6598_12660 PF02547 Queuosine biosynthesis protein J6598_12665 PF00571 CBS domain J6598_12670 PF10417 C-terminal domain of 1-Cys peroxiredoxin J6598_12670 PF00578 AhpC/TSA family J6598_12675 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_12675 PF13192 Thioredoxin domain J6598_12740 PF00664 ABC transporter transmembrane region J6598_12740 PF00005 ABC transporter J6598_12740 PF03412 Peptidase C39 family J6598_12745 PF04055 Radical SAM superfamily J6598_12745 PF16199 Radical_SAM C-terminal domain J6598_12750 PF04898 Glutamate synthase central domain J6598_12750 PF01493 GXGXG motif J6598_12750 PF00310 Glutamine amidotransferases class-II J6598_12750 PF01645 Conserved region in glutamate synthase J6598_12755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J6598_12755 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_12765 PF00270 DEAD/DEAH box helicase J6598_12765 PF00271 Helicase conserved C-terminal domain J6598_12780 PF07664 Ferrous iron transport protein B C terminus J6598_12780 PF02421 Ferrous iron transport protein B J6598_12780 PF07670 Nucleoside recognition J6598_12790 PF01253 Translation initiation factor SUI1 J6598_12795 PF01169 Uncharacterized protein family UPF0016 J6598_12840 PF09190 DALR domain J6598_12840 PF01406 tRNA synthetases class I (C) catalytic domain J6598_12845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J6598_12855 PF00149 Calcineurin-like phosphoesterase J6598_12880 PF01066 CDP-alcohol phosphatidyltransferase J6598_12885 PF08459 UvrC Helix-hairpin-helix N-terminal J6598_12885 PF02151 UvrB/uvrC motif J6598_12885 PF01541 GIY-YIG catalytic domain J6598_12890 PF00072 Response regulator receiver domain J6598_12890 PF00196 Bacterial regulatory proteins, luxR family J6598_12895 PF02348 Cytidylyltransferase J6598_12900 PF03966 Trm112p-like protein J6598_12905 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J6598_12910 PF00005 ABC transporter J6598_12910 PF00664 ABC transporter transmembrane region J6598_12915 PF00753 Metallo-beta-lactamase superfamily J6598_12915 PF03772 Competence protein J6598_12935 PF00155 Aminotransferase class I and II J6598_12945 PF03466 LysR substrate binding domain J6598_12945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_12950 PF04219 Protein of unknown function, DUF J6598_12955 PF03974 Ecotin J6598_12960 PF03009 Glycerophosphoryl diester phosphodiesterase family J6598_12965 PF01266 FAD dependent oxidoreductase J6598_12965 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J6598_12970 PF00455 DeoR C terminal sensor domain J6598_12970 PF08220 DeoR-like helix-turn-helix domain J6598_12975 PF07690 Major Facilitator Superfamily J6598_12980 PF00230 Major intrinsic protein J6598_12985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J6598_12985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J6598_12990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_12990 PF02743 Cache domain J6598_12990 PF00672 HAMP domain J6598_13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_13000 PF03466 LysR substrate binding domain J6598_13015 PF00248 Aldo/keto reductase family J6598_13025 PF07690 Major Facilitator Superfamily J6598_13035 PF02322 Cytochrome bd terminal oxidase subunit II J6598_13040 PF01654 Cytochrome bd terminal oxidase subunit I J6598_13045 PF00155 Aminotransferase class I and II J6598_13045 PF00392 Bacterial regulatory proteins, gntR family J6598_13050 PF04391 Protein of unknown function (DUF533) J6598_13055 PF03061 Thioesterase superfamily J6598_13060 PF10689 Protein of unknown function (DUF2496) J6598_13065 PF03466 LysR substrate binding domain J6598_13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_13070 PF07690 Major Facilitator Superfamily J6598_13075 PF01479 S4 domain J6598_13075 PF00849 RNA pseudouridylate synthase J6598_13085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6598_13095 PF01844 HNH endonuclease J6598_13100 PF02508 Rnf-Nqr subunit, membrane protein J6598_13105 PF04060 Putative Fe-S cluster J6598_13110 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J6598_13110 PF12838 4Fe-4S dicluster domain J6598_13110 PF13375 RnfC Barrel sandwich hybrid domain J6598_13110 PF10531 SLBB domain J6598_13115 PF03116 NQR2, RnfD, RnfE family J6598_13120 PF04205 FMN-binding domain J6598_13125 PF02508 Rnf-Nqr subunit, membrane protein J6598_13130 PF10576 Iron-sulfur binding domain of endonuclease III J6598_13130 PF00633 Helix-hairpin-helix motif J6598_13130 PF00730 HhH-GPD superfamily base excision DNA repair protein J6598_13135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6598_13140 PF00691 OmpA family J6598_13140 PF18393 MotY N-terminal domain J6598_13165 PF08378 Nuclease-related domain J6598_13170 PF07759 Protein of unknown function (DUF1615) J6598_13175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6598_13175 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J6598_13175 PF02142 MGS-like domain J6598_13180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J6598_13180 PF00117 Glutamine amidotransferase class-I J6598_13185 PF05173 Dihydrodipicolinate reductase, C-terminus J6598_13185 PF01113 Dihydrodipicolinate reductase, N-terminus J6598_13200 PF01812 5-formyltetrahydrofolate cyclo-ligase family J6598_13205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J6598_13210 PF01842 ACT domain J6598_13210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6598_13210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6598_13215 PF01219 Prokaryotic diacylglycerol kinase J6598_13220 PF00793 DAHP synthetase I family J6598_13225 PF00583 Acetyltransferase (GNAT) family J6598_13230 PF00005 ABC transporter J6598_13235 PF01032 FecCD transport family J6598_13250 PF00437 Type II/IV secretion system protein J6598_13260 PF00842 Alanine racemase, C-terminal domain J6598_13260 PF01168 Alanine racemase, N-terminal domain J6598_13265 PF03741 Integral membrane protein TerC family J6598_13270 PF00005 ABC transporter J6598_13270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_13275 PF00005 ABC transporter J6598_13275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_13280 PF12911 N-terminal TM domain of oligopeptide transport permease C J6598_13280 PF00528 Binding-protein-dependent transport system inner membrane component J6598_13285 PF00528 Binding-protein-dependent transport system inner membrane component J6598_13290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_13295 PF01914 MarC family integral membrane protein J6598_13300 PF00171 Aldehyde dehydrogenase family J6598_13300 PF00465 Iron-containing alcohol dehydrogenase J6598_13330 PF01709 Transcriptional regulator J6598_13335 PF00152 tRNA synthetases class II (D, K and N) J6598_13335 PF01336 OB-fold nucleic acid binding domain J6598_13335 PF02938 GAD domain J6598_13345 PF01904 Protein of unknown function DUF72 J6598_13350 PF13649 Methyltransferase domain J6598_13355 PF08003 Protein of unknown function (DUF1698) J6598_13375 PF00578 AhpC/TSA family J6598_13375 PF10417 C-terminal domain of 1-Cys peroxiredoxin J6598_13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_13380 PF03466 LysR substrate binding domain J6598_13385 PF00877 NlpC/P60 family J6598_13395 PF03466 LysR substrate binding domain J6598_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_13400 PF02447 GntP family permease J6598_13405 PF00291 Pyridoxal-phosphate dependent enzyme J6598_13415 PF00180 Isocitrate/isopropylmalate dehydrogenase J6598_13420 PF12833 Helix-turn-helix domain J6598_13425 PF01238 Phosphomannose isomerase type I J6598_13430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_13430 PF00672 HAMP domain J6598_13450 PF05656 Protein of unknown function (DUF805) J6598_13455 PF07690 Major Facilitator Superfamily J6598_13460 PF01040 UbiA prenyltransferase family J6598_13465 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J6598_13470 PF00510 Cytochrome c oxidase subunit III J6598_13475 PF00115 Cytochrome C and Quinol oxidase polypeptide I J6598_13480 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J6598_13480 PF06481 COX Aromatic Rich Motif J6598_13490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J6598_13490 PF00034 Cytochrome c J6598_13500 PF01156 Inosine-uridine preferring nucleoside hydrolase J6598_13510 PF00171 Aldehyde dehydrogenase family J6598_13515 PF08359 YsiA-like protein, C-terminal region J6598_13515 PF00440 Bacterial regulatory proteins, tetR family J6598_13525 PF00465 Iron-containing alcohol dehydrogenase J6598_13545 PF01554 MatE J6598_13555 PF04325 Protein of unknown function (DUF465) J6598_13565 PF13188 PAS domain J6598_13565 PF03707 Bacterial signalling protein N terminal repeat J6598_13565 PF00563 EAL domain J6598_13565 PF00990 Diguanylate cyclase, GGDEF domain J6598_13570 PF04337 Protein of unknown function, DUF480 J6598_13580 PF00127 Copper binding proteins, plastocyanin/azurin family J6598_13585 PF02424 ApbE family J6598_13600 PF03372 Endonuclease/Exonuclease/phosphatase family J6598_13605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_13610 PF00873 AcrB/AcrD/AcrF family J6598_13625 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J6598_13635 PF00529 HlyD membrane-fusion protein of T1SS J6598_13635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_13640 PF00873 AcrB/AcrD/AcrF family J6598_13650 PF01497 Periplasmic binding protein J6598_13655 PF00005 ABC transporter J6598_13660 PF01032 FecCD transport family J6598_13665 PF01032 FecCD transport family J6598_13670 PF08021 Siderophore-interacting FAD-binding domain J6598_13670 PF04954 Siderophore-interacting protein J6598_13675 PF11849 Domain of unknown function (DUF3369) J6598_13685 PF00929 Exonuclease J6598_13690 PF00075 RNase H J6598_13695 PF08241 Methyltransferase domain J6598_13700 PF00753 Metallo-beta-lactamase superfamily J6598_13700 PF16123 Hydroxyacylglutathione hydrolase C-terminus J6598_13705 PF01476 LysM domain J6598_13705 PF01464 Transglycosylase SLT domain J6598_13710 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J6598_13720 PF05472 DNA replication terminus site-binding protein (Ter protein) J6598_13725 PF00271 Helicase conserved C-terminal domain J6598_13725 PF04434 SWIM zinc finger J6598_13725 PF00176 SNF2 family N-terminal domain J6598_13730 PF00512 His Kinase A (phospho-acceptor) domain J6598_13730 PF00672 HAMP domain J6598_13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_13735 PF00486 Transcriptional regulatory protein, C terminal J6598_13735 PF00072 Response regulator receiver domain J6598_13740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_13740 PF00529 HlyD membrane-fusion protein of T1SS J6598_13745 PF00873 AcrB/AcrD/AcrF family J6598_13755 PF00884 Sulfatase J6598_13755 PF08019 Phosphoethanolamine transferase EptA/EptB J6598_13760 PF01966 HD domain J6598_13765 PF07694 5TMR of 5TMR-LYT J6598_13765 PF06580 Histidine kinase J6598_13770 PF00072 Response regulator receiver domain J6598_13770 PF04397 LytTr DNA-binding domain J6598_13775 PF02554 Carbon starvation protein CstA J6598_13780 PF11742 Protein of unknown function (DUF3302) J6598_13785 PF00529 HlyD membrane-fusion protein of T1SS J6598_13785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_13790 PF04851 Type III restriction enzyme, res subunit J6598_13790 PF00271 Helicase conserved C-terminal domain J6598_13795 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J6598_13800 PF00462 Glutaredoxin J6598_13805 PF03372 Endonuclease/Exonuclease/phosphatase family J6598_13815 PF03061 Thioesterase superfamily J6598_13820 PF01370 NAD dependent epimerase/dehydratase family J6598_13830 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II J6598_13830 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J6598_13830 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg J6598_13830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6598_13830 PF10371 Domain of unknown function J6598_13835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J6598_13835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J6598_13835 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_13845 PF00111 2Fe-2S iron-sulfur cluster binding domain J6598_13845 PF03473 MOSC domain J6598_13845 PF03476 MOSC N-terminal beta barrel domain J6598_13845 PF00111 2Fe-2S iron-sulfur cluster binding domain J6598_13845 PF03473 MOSC domain J6598_13845 PF03476 MOSC N-terminal beta barrel domain J6598_13850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_13850 PF13426 PAS domain J6598_13850 PF08447 PAS fold J6598_13855 PF01435 Peptidase family M48 J6598_13865 PF08241 Methyltransferase domain J6598_13865 PF12697 Alpha/beta hydrolase family J6598_13870 PF00155 Aminotransferase class I and II J6598_13875 PF04055 Radical SAM superfamily J6598_13875 PF06968 Biotin and Thiamin Synthesis associated domain J6598_13880 PF00202 Aminotransferase class-III J6598_13895 PF01336 OB-fold nucleic acid binding domain J6598_13895 PF00152 tRNA synthetases class II (D, K and N) J6598_13905 PF03605 Anaerobic c4-dicarboxylate membrane transporter J6598_13915 PF01546 Peptidase family M20/M25/M40 J6598_13915 PF07687 Peptidase dimerisation domain J6598_13920 PF03606 C4-dicarboxylate anaerobic carrier J6598_13930 PF03960 ArsC family J6598_13935 PF07687 Peptidase dimerisation domain J6598_13935 PF01546 Peptidase family M20/M25/M40 J6598_13940 PF02557 D-alanyl-D-alanine carboxypeptidase J6598_13950 PF00999 Sodium/hydrogen exchanger family J6598_13950 PF03471 Transporter associated domain J6598_13950 PF02080 TrkA-C domain J6598_13965 PF01810 LysE type translocator J6598_13970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_13970 PF00672 HAMP domain J6598_13970 PF12729 Four helix bundle sensory module for signal transduction J6598_13975 PF07509 Protein of unknown function (DUF1523) J6598_13995 PF01156 Inosine-uridine preferring nucleoside hydrolase J6598_14000 PF00849 RNA pseudouridylate synthase J6598_14005 PF01048 Phosphorylase superfamily J6598_14010 PF00465 Iron-containing alcohol dehydrogenase J6598_14045 PF00437 Type II/IV secretion system protein J6598_14050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J6598_14060 PF04972 BON domain J6598_14060 PF00263 Bacterial type II and III secretion system protein J6598_14060 PF13629 Pilus formation protein N terminal region J6598_14090 PF04355 SmpA / OmlA family J6598_14095 PF13460 NAD(P)H-binding J6598_14105 PF03099 Biotin/lipoate A/B protein ligase family J6598_14105 PF10437 Bacterial lipoate protein ligase C-terminus J6598_14110 PF03707 Bacterial signalling protein N terminal repeat J6598_14110 PF00990 Diguanylate cyclase, GGDEF domain J6598_14110 PF00563 EAL domain J6598_14115 PF02687 FtsX-like permease family J6598_14115 PF00005 ABC transporter J6598_14115 PF12704 MacB-like periplasmic core domain J6598_14120 PF00005 ABC transporter J6598_14120 PF02687 FtsX-like permease family J6598_14120 PF12704 MacB-like periplasmic core domain J6598_14125 PF00005 ABC transporter J6598_14125 PF02687 FtsX-like permease family J6598_14125 PF12704 MacB-like periplasmic core domain J6598_14130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_14130 PF00529 HlyD membrane-fusion protein of T1SS J6598_14135 PF00873 AcrB/AcrD/AcrF family J6598_14150 PF04143 Sulphur transport J6598_14170 PF02308 MgtC family J6598_14175 PF00356 Bacterial regulatory proteins, lacI family J6598_14175 PF13407 Periplasmic binding protein domain J6598_14180 PF08244 Glycosyl hydrolases family 32 C terminal J6598_14180 PF00251 Glycosyl hydrolases family 32 N-terminal domain J6598_14185 PF00367 phosphotransferase system, EIIB J6598_14185 PF02378 Phosphotransferase system, EIIC J6598_14190 PF00294 pfkB family carbohydrate kinase J6598_14195 PF02264 LamB porin J6598_14195 PF11471 Maltoporin periplasmic N-terminal extension J6598_14200 PF00226 DnaJ domain J6598_14200 PF01556 DnaJ C terminal domain J6598_14200 PF00684 DnaJ central domain J6598_14205 PF00012 Hsp70 protein J6598_14210 PF01025 GrpE J6598_14215 PF01513 ATP-NAD kinase J6598_14220 PF02463 RecF/RecN/SMC N terminal domain J6598_14225 PF02833 DHHA2 domain J6598_14225 PF01368 DHH family J6598_14230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_14235 PF00005 ABC transporter J6598_14235 PF02687 FtsX-like permease family J6598_14235 PF12704 MacB-like periplasmic core domain J6598_14240 PF02321 Outer membrane efflux protein J6598_14245 PF00816 H-NS histone family J6598_14255 PF02397 Bacterial sugar transferase J6598_14265 PF13439 Glycosyltransferase Family 4 J6598_14265 PF00534 Glycosyl transferases group 1 J6598_14270 PF00535 Glycosyl transferase family 2 J6598_14280 PF02719 Polysaccharide biosynthesis protein J6598_14285 PF00953 Glycosyl transferase family 4 J6598_14290 PF01370 NAD dependent epimerase/dehydratase family J6598_14305 PF03600 Citrate transporter J6598_14305 PF02080 TrkA-C domain J6598_14310 PF00009 Elongation factor Tu GTP binding domain J6598_14315 PF01507 Phosphoadenosine phosphosulfate reductase family J6598_14335 PF00005 ABC transporter J6598_14340 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_14340 PF14602 Hexapeptide repeat of succinyl-transferase J6598_14340 PF12804 MobA-like NTP transferase domain J6598_14350 PF00263 Bacterial type II and III secretion system protein J6598_14350 PF03958 Bacterial type II/III secretion system short domain J6598_14385 PF07963 Prokaryotic N-terminal methylation motif J6598_14390 PF07963 Prokaryotic N-terminal methylation motif J6598_14390 PF08334 Type II secretion system (T2SS), protein G J6598_14395 PF00482 Type II secretion system (T2SS), protein F J6598_14400 PF00437 Type II/IV secretion system protein J6598_14410 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J6598_14415 PF00483 Nucleotidyl transferase J6598_14420 PF04321 RmlD substrate binding domain J6598_14425 PF16363 GDP-mannose 4,6 dehydratase J6598_14430 PF00873 AcrB/AcrD/AcrF family J6598_14435 PF00529 HlyD membrane-fusion protein of T1SS J6598_14435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_14440 PF08361 MAATS-type transcriptional repressor, C-terminal region J6598_14440 PF00440 Bacterial regulatory proteins, tetR family J6598_14455 PF02001 Protein of unknown function DUF134 J6598_14470 PF00072 Response regulator receiver domain J6598_14475 PF18693 TRAM domain J6598_14475 PF04055 Radical SAM superfamily J6598_14475 PF00919 Uncharacterized protein family UPF0004 J6598_14495 PF14821 Threonine synthase N terminus J6598_14495 PF00291 Pyridoxal-phosphate dependent enzyme J6598_14500 PF00288 GHMP kinases N terminal domain J6598_14500 PF08544 GHMP kinases C terminal J6598_14505 PF01842 ACT domain J6598_14505 PF13840 ACT domain J6598_14505 PF00742 Homoserine dehydrogenase J6598_14505 PF03447 Homoserine dehydrogenase, NAD binding domain J6598_14505 PF00696 Amino acid kinase family J6598_14510 PF00588 SpoU rRNA Methylase family J6598_14515 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J6598_14530 PF00849 RNA pseudouridylate synthase J6598_14530 PF01479 S4 domain J6598_14535 PF04079 Segregation and condensation complex subunit ScpB J6598_14540 PF02616 Segregation and condensation protein ScpA J6598_14545 PF01300 Telomere recombination J6598_14550 PF02811 PHP domain J6598_14555 PF04715 Anthranilate synthase component I, N terminal region J6598_14555 PF00425 chorismate binding enzyme J6598_14565 PF00117 Glutamine amidotransferase class-I J6598_14565 PF02885 Glycosyl transferase family, helical bundle domain J6598_14565 PF00591 Glycosyl transferase family, a/b domain J6598_14570 PF02885 Glycosyl transferase family, helical bundle domain J6598_14570 PF00591 Glycosyl transferase family, a/b domain J6598_14575 PF00218 Indole-3-glycerol phosphate synthase J6598_14575 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J6598_14580 PF00291 Pyridoxal-phosphate dependent enzyme J6598_14585 PF00290 Tryptophan synthase alpha chain J6598_14600 PF04307 LexA-binding, inner membrane-associated putative hydrolase J6598_14615 PF07670 Nucleoside recognition J6598_14615 PF07662 Na+ dependent nucleoside transporter C-terminus J6598_14615 PF01773 Na+ dependent nucleoside transporter N-terminus J6598_14630 PF03960 ArsC family J6598_14635 PF01758 Sodium Bile acid symporter family J6598_14640 PF02374 Anion-transporting ATPase J6598_14645 PF06953 Arsenical resistance operon trans-acting repressor ArsD J6598_14665 PF03737 Aldolase/RraA J6598_14675 PF00072 Response regulator receiver domain J6598_14675 PF00486 Transcriptional regulatory protein, C terminal J6598_14690 PF00664 ABC transporter transmembrane region J6598_14690 PF00005 ABC transporter J6598_14695 PF00664 ABC transporter transmembrane region J6598_14695 PF00005 ABC transporter J6598_14715 PF01980 tRNA-methyltransferase O J6598_14715 PF18389 TrmO C-terminal domain J6598_14720 PF01292 Prokaryotic cytochrome b561 J6598_14730 PF00072 Response regulator receiver domain J6598_14730 PF00486 Transcriptional regulatory protein, C terminal J6598_14735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_14740 PF03350 Uncharacterized protein family, UPF0114 J6598_14755 PF01266 FAD dependent oxidoreductase J6598_14760 PF07883 Cupin domain J6598_14760 PF01381 Helix-turn-helix J6598_14765 PF00171 Aldehyde dehydrogenase family J6598_14770 PF00202 Aminotransferase class-III J6598_14775 PF00324 Amino acid permease J6598_14785 PF00324 Amino acid permease J6598_14795 PF02690 Na+/Pi-cotransporter J6598_14800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6598_14800 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J6598_14810 PF04381 Putative exonuclease, RdgC J6598_14820 PF00149 Calcineurin-like phosphoesterase J6598_14820 PF12320 Type 5 capsule protein repressor C-terminal domain J6598_14825 PF13476 AAA domain J6598_14830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J6598_14840 PF00224 Pyruvate kinase, barrel domain J6598_14840 PF02887 Pyruvate kinase, alpha/beta domain J6598_14845 PF12795 Mechanosensitive ion channel porin domain J6598_14845 PF00924 Mechanosensitive ion channel J6598_14845 PF12794 Mechanosensitive ion channel inner membrane domain 1 J6598_14855 PF01431 Peptidase family M13 J6598_14855 PF05649 Peptidase family M13 J6598_14860 PF00990 Diguanylate cyclase, GGDEF domain J6598_14865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J6598_14870 PF02896 PEP-utilising enzyme, TIM barrel domain J6598_14870 PF05524 PEP-utilising enzyme, N-terminal J6598_14870 PF00391 PEP-utilising enzyme, mobile domain J6598_14875 PF00381 PTS HPr component phosphorylation site J6598_14880 PF00291 Pyridoxal-phosphate dependent enzyme J6598_14885 PF01434 Peptidase family M41 J6598_14885 PF17862 AAA+ lid domain J6598_14885 PF00004 ATPase family associated with various cellular activities (AAA) J6598_14895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J6598_14895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J6598_14900 PF01966 HD domain J6598_14900 PF00672 HAMP domain J6598_14905 PF01471 Putative peptidoglycan binding domain J6598_14905 PF13401 AAA domain J6598_14910 PF16537 Type II secretion system protein B J6598_14915 PF11356 Type II secretion system protein C J6598_14920 PF00263 Bacterial type II and III secretion system protein J6598_14920 PF03958 Bacterial type II/III secretion system short domain J6598_14925 PF00437 Type II/IV secretion system protein J6598_14930 PF00482 Type II secretion system (T2SS), protein F J6598_14935 PF07963 Prokaryotic N-terminal methylation motif J6598_14935 PF08334 Type II secretion system (T2SS), protein G J6598_14940 PF12019 Type II transport protein GspH J6598_14940 PF07963 Prokaryotic N-terminal methylation motif J6598_14945 PF07963 Prokaryotic N-terminal methylation motif J6598_14945 PF02501 Type II secretion system (T2SS), protein I J6598_14950 PF07963 Prokaryotic N-terminal methylation motif J6598_14950 PF11612 Type II secretion system (T2SS), protein J J6598_14955 PF03934 Type II secretion system (T2SS), protein K J6598_14960 PF05134 Type II secretion system (T2SS), protein L J6598_14960 PF12693 GspL periplasmic domain J6598_14965 PF04612 Type II secretion system (T2SS), protein M J6598_14970 PF01203 Type II secretion system (T2SS), protein N J6598_14980 PF01027 Inhibitor of apoptosis-promoting Bax1 J6598_14985 PF12805 FUSC-like inner membrane protein yccS J6598_14990 PF04358 DsrC like protein J6598_14995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J6598_15000 PF03466 LysR substrate binding domain J6598_15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_15025 PF04055 Radical SAM superfamily J6598_15025 PF08497 Radical SAM N-terminal J6598_15025 PF11842 Domain of unknown function (DUF3362) J6598_15030 PF00873 AcrB/AcrD/AcrF family J6598_15035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_15040 PF17158 Membrane-associated sensor, integral membrane domain J6598_15040 PF00990 Diguanylate cyclase, GGDEF domain J6598_15045 PF01734 Patatin-like phospholipase J6598_15050 PF13520 Amino acid permease J6598_15065 PF00691 OmpA family J6598_15065 PF01389 OmpA-like transmembrane domain J6598_15070 PF00691 OmpA family J6598_15070 PF01389 OmpA-like transmembrane domain J6598_15075 PF03949 Malic enzyme, NAD binding domain J6598_15075 PF00390 Malic enzyme, N-terminal domain J6598_15080 PF12833 Helix-turn-helix domain J6598_15085 PF01554 MatE J6598_15090 PF10692 Protein of unknown function (DUF2498) J6598_15095 PF00990 Diguanylate cyclase, GGDEF domain J6598_15100 PF00860 Permease family J6598_15110 PF01235 Sodium:alanine symporter family J6598_15115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J6598_15115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J6598_15120 PF01699 Sodium/calcium exchanger protein J6598_15125 PF08534 Redoxin J6598_15135 PF00293 NUDIX domain J6598_15150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6598_15150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J6598_15155 PF03932 CutC family J6598_15160 PF00480 ROK family J6598_15170 PF01435 Peptidase family M48 J6598_15175 PF12849 PBP superfamily domain J6598_15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_15180 PF00512 His Kinase A (phospho-acceptor) domain J6598_15180 PF00989 PAS fold J6598_15180 PF11808 Phosphate regulon sensor protein PhoR J6598_15185 PF00072 Response regulator receiver domain J6598_15185 PF00486 Transcriptional regulatory protein, C terminal J6598_15190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6598_15200 PF00171 Aldehyde dehydrogenase family J6598_15210 PF00892 EamA-like transporter family J6598_15215 PF00072 Response regulator receiver domain J6598_15215 PF12431 Transcriptional regulator J6598_15220 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J6598_15220 PF17203 Single cache domain 3 J6598_15220 PF00989 PAS fold J6598_15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_15225 PF00390 Malic enzyme, N-terminal domain J6598_15225 PF03949 Malic enzyme, NAD binding domain J6598_15230 PF03390 2-hydroxycarboxylate transporter family J6598_15235 PF01047 MarR family J6598_15240 PF00529 HlyD membrane-fusion protein of T1SS J6598_15240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_15265 PF01679 Proteolipid membrane potential modulator J6598_15275 PF03477 ATP cone domain J6598_15275 PF13597 Anaerobic ribonucleoside-triphosphate reductase J6598_15285 PF12826 Helix-hairpin-helix motif J6598_15285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J6598_15285 PF00533 BRCA1 C Terminus (BRCT) domain J6598_15285 PF01653 NAD-dependent DNA ligase adenylation domain J6598_15285 PF03120 NAD-dependent DNA ligase OB-fold domain J6598_15290 PF04354 ZipA, C-terminal FtsZ-binding domain J6598_15295 PF06470 SMC proteins Flexible Hinge Domain J6598_15295 PF02463 RecF/RecN/SMC N terminal domain J6598_15305 PF03458 UPF0126 domain J6598_15315 PF05951 Bacterial protein of unknown function (DUF882) J6598_15320 PF03734 L,D-transpeptidase catalytic domain J6598_15320 PF01471 Putative peptidoglycan binding domain J6598_15335 PF00535 Glycosyl transferase family 2 J6598_15350 PF00128 Alpha amylase, catalytic domain J6598_15360 PF00072 Response regulator receiver domain J6598_15360 PF00196 Bacterial regulatory proteins, luxR family J6598_15380 PF02254 TrkA-N domain J6598_15380 PF02080 TrkA-C domain J6598_15380 PF00999 Sodium/hydrogen exchanger family J6598_15385 PF00990 Diguanylate cyclase, GGDEF domain J6598_15390 PF01171 PP-loop family J6598_15390 PF09179 TilS substrate binding domain J6598_15390 PF11734 TilS substrate C-terminal domain J6598_15395 PF01431 Peptidase family M13 J6598_15395 PF05649 Peptidase family M13 J6598_15405 PF08543 Phosphomethylpyrimidine kinase J6598_15410 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J6598_15410 PF01276 Orn/Lys/Arg decarboxylase, major domain J6598_15410 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J6598_15415 PF13520 Amino acid permease J6598_15420 PF00486 Transcriptional regulatory protein, C terminal J6598_15420 PF18500 CadC C-terminal domain 1 J6598_15425 PF13520 Amino acid permease J6598_15430 PF03466 LysR substrate binding domain J6598_15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_15435 PF12706 Beta-lactamase superfamily domain J6598_15455 PF03466 LysR substrate binding domain J6598_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_15465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6598_15465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6598_15465 PF00205 Thiamine pyrophosphate enzyme, central domain J6598_15470 PF03306 Alpha-acetolactate decarboxylase J6598_15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_15475 PF03466 LysR substrate binding domain J6598_15480 PF00579 tRNA synthetases class I (W and Y) J6598_15485 PF01551 Peptidase family M23 J6598_15485 PF08525 Opacity-associated protein A N-terminal motif J6598_15485 PF01476 LysM domain J6598_15490 PF03702 Anhydro-N-acetylmuramic acid kinase J6598_15500 PF01042 Endoribonuclease L-PSP J6598_15510 PF01965 DJ-1/PfpI family J6598_15515 PF03466 LysR substrate binding domain J6598_15515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_15520 PF08240 Alcohol dehydrogenase GroES-like domain J6598_15520 PF16197 Ketoacyl-synthetase C-terminal extension J6598_15520 PF14765 Polyketide synthase dehydratase J6598_15520 PF00109 Beta-ketoacyl synthase, N-terminal domain J6598_15520 PF00698 Acyl transferase domain J6598_15520 PF02801 Beta-ketoacyl synthase, C-terminal domain J6598_15520 PF00550 Phosphopantetheine attachment site J6598_15520 PF08659 KR domain J6598_15530 PF02779 Transketolase, pyrimidine binding domain J6598_15530 PF02780 Transketolase, C-terminal domain J6598_15530 PF00456 Transketolase, thiamine diphosphate binding domain J6598_15535 PF00438 S-adenosylmethionine synthetase, N-terminal domain J6598_15535 PF02773 S-adenosylmethionine synthetase, C-terminal domain J6598_15535 PF02772 S-adenosylmethionine synthetase, central domain J6598_15540 PF10263 SprT-like family J6598_15540 PF17283 SprT-like zinc ribbon domain J6598_15545 PF04231 Endonuclease I J6598_15550 PF04452 RNA methyltransferase J6598_15555 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J6598_15555 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J6598_15560 PF02622 Uncharacterized ACR, COG1678 J6598_15565 PF03652 Holliday junction resolvase J6598_15570 PF00854 POT family J6598_15575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_15575 PF03466 LysR substrate binding domain J6598_15580 PF07690 Major Facilitator Superfamily J6598_15585 PF07726 ATPase family associated with various cellular activities (AAA) J6598_15585 PF17863 AAA lid domain J6598_15595 PF11992 Domain of unknown function (DUF3488) J6598_15595 PF13559 Domain of unknown function (DUF4129) J6598_15595 PF01841 Transglutaminase-like superfamily J6598_15600 PF01235 Sodium:alanine symporter family J6598_15605 PF00923 Transaldolase/Fructose-6-phosphate aldolase J6598_15615 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J6598_15620 PF01336 OB-fold nucleic acid binding domain J6598_15620 PF14579 Helix-hairpin-helix motif J6598_15620 PF02811 PHP domain J6598_15620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J6598_15620 PF07733 Bacterial DNA polymerase III alpha NTPase domain J6598_15625 PF01351 Ribonuclease HII J6598_15630 PF02684 Lipid-A-disaccharide synthetase J6598_15635 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J6598_15635 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_15640 PF07977 FabA-like domain J6598_15645 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_15645 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J6598_15650 PF03938 Outer membrane protein (OmpH-like) J6598_15655 PF01103 Surface antigen J6598_15655 PF07244 Surface antigen variable number repeat J6598_15660 PF17820 PDZ domain J6598_15660 PF02163 Peptidase family M50 J6598_15665 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J6598_15665 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J6598_15665 PF13288 DXP reductoisomerase C-terminal domain J6598_15675 PF01255 Putative undecaprenyl diphosphate synthase J6598_15680 PF01765 Ribosome recycling factor J6598_15685 PF00696 Amino acid kinase family J6598_15690 PF00889 Elongation factor TS J6598_15695 PF00318 Ribosomal protein S2 J6598_15700 PF00557 Metallopeptidase family M24 J6598_15705 PF01842 ACT domain J6598_15705 PF08335 GlnD PII-uridylyltransferase J6598_15705 PF01966 HD domain J6598_15705 PF01909 Nucleotidyltransferase domain J6598_15710 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J6598_15710 PF14602 Hexapeptide repeat of succinyl-transferase J6598_15710 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_15715 PF11944 Protein of unknown function (DUF3461) J6598_15720 PF02378 Phosphotransferase system, EIIC J6598_15720 PF00367 phosphotransferase system, EIIB J6598_15725 PF07148 Maltose operon periplasmic protein precursor (MalM) J6598_15730 PF02264 LamB porin J6598_15735 PF00258 Flavodoxin J6598_15740 PF00849 RNA pseudouridylate synthase J6598_15745 PF04287 tRNA pseudouridine synthase C J6598_15770 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) J6598_15775 PF07348 Syd protein (SUKH-2) J6598_15780 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J6598_15780 PF14489 QueF-like protein J6598_15790 PF00990 Diguanylate cyclase, GGDEF domain J6598_15795 PF03641 Possible lysine decarboxylase J6598_15795 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J6598_15795 PF11892 Domain of unknown function (DUF3412) J6598_15800 PF01367 5'-3' exonuclease, C-terminal SAM fold J6598_15800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J6598_15805 PF18324 Hypothetical protein TT1725 J6598_15805 PF00180 Isocitrate/isopropylmalate dehydrogenase J6598_15815 PF18125 RlmM ferredoxin-like domain J6598_15815 PF01728 FtsJ-like methyltransferase J6598_15820 PF04241 Protein of unknown function (DUF423) J6598_15830 PF03466 LysR substrate binding domain J6598_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_15835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_15835 PF00672 HAMP domain J6598_15840 PF00817 impB/mucB/samB family J6598_15840 PF11799 impB/mucB/samB family C-terminal domain J6598_15840 PF11798 IMS family HHH motif J6598_15850 PF01965 DJ-1/PfpI family J6598_15855 PF08546 Ketopantoate reductase PanE/ApbA C terminal J6598_15855 PF02558 Ketopantoate reductase PanE/ApbA J6598_15860 PF04461 Protein of unknown function (DUF520) J6598_15865 PF03502 Nucleoside-specific channel-forming protein, Tsx J6598_15870 PF07690 Major Facilitator Superfamily J6598_15875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J6598_15885 PF05175 Methyltransferase small domain J6598_15890 PF01722 BolA-like protein J6598_15895 PF11973 NQRA C-terminal domain J6598_15895 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) J6598_15900 PF03116 NQR2, RnfD, RnfE family J6598_15905 PF04205 FMN-binding domain J6598_15910 PF02508 Rnf-Nqr subunit, membrane protein J6598_15915 PF02508 Rnf-Nqr subunit, membrane protein J6598_15920 PF00970 Oxidoreductase FAD-binding domain J6598_15920 PF00111 2Fe-2S iron-sulfur cluster binding domain J6598_15920 PF00175 Oxidoreductase NAD-binding domain J6598_15925 PF02424 ApbE family J6598_15970 PF00106 short chain dehydrogenase J6598_15980 PF00875 DNA photolyase J6598_15980 PF03441 FAD binding domain of DNA photolyase J6598_15985 PF13411 MerR HTH family regulatory protein J6598_15990 PF08349 Protein of unknown function (DUF1722) J6598_16005 PF06508 Queuosine biosynthesis protein QueC J6598_16020 PF00800 Prephenate dehydratase J6598_16020 PF01817 Chorismate mutase type II J6598_16050 PF09588 YqaJ-like viral recombinase domain J6598_16095 PF04002 RadC-like JAB domain J6598_16110 PF02887 Pyruvate kinase, alpha/beta domain J6598_16110 PF00224 Pyruvate kinase, barrel domain J6598_16115 PF07745 Glycosyl hydrolase family 53 J6598_16120 PF02378 Phosphotransferase system, EIIC J6598_16120 PF00367 phosphotransferase system, EIIB J6598_16125 PF02449 Beta-galactosidase J6598_16125 PF08533 Beta-galactosidase C-terminal domain J6598_16125 PF08532 Beta-galactosidase trimerisation domain J6598_16130 PF07745 Glycosyl hydrolase family 53 J6598_16135 PF00528 Binding-protein-dependent transport system inner membrane component J6598_16140 PF00528 Binding-protein-dependent transport system inner membrane component J6598_16145 PF13416 Bacterial extracellular solute-binding protein J6598_16150 PF17912 MalK OB fold domain J6598_16150 PF00005 ABC transporter J6598_16155 PF00672 HAMP domain J6598_16155 PF02743 Cache domain J6598_16155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_16165 PF07745 Glycosyl hydrolase family 53 J6598_16170 PF02264 LamB porin J6598_16175 PF00356 Bacterial regulatory proteins, lacI family J6598_16180 PF16363 GDP-mannose 4,6 dehydratase J6598_16185 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J6598_16185 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J6598_16190 PF10509 Galactokinase galactose-binding signature J6598_16190 PF08544 GHMP kinases C terminal J6598_16190 PF00288 GHMP kinases N terminal domain J6598_16225 PF00672 HAMP domain J6598_16225 PF16591 Helical bimodular sensor domain J6598_16225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_16230 PF03573 outer membrane porin, OprD family J6598_16235 PF00106 short chain dehydrogenase J6598_16260 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J6598_16290 PF07963 Prokaryotic N-terminal methylation motif J6598_16290 PF00114 Pilin (bacterial filament) J6598_16295 PF02805 Metal binding domain of Ada J6598_16295 PF00730 HhH-GPD superfamily base excision DNA repair protein J6598_16295 PF06029 AlkA N-terminal domain J6598_16295 PF12833 Helix-turn-helix domain J6598_16300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6598_16300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6598_16310 PF12392 Collagenase J6598_16310 PF01136 Peptidase family U32 J6598_16315 PF01810 LysE type translocator J6598_16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_16320 PF03466 LysR substrate binding domain J6598_16325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J6598_16325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J6598_16330 PF02743 Cache domain J6598_16330 PF00672 HAMP domain J6598_16330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_16335 PF00072 Response regulator receiver domain J6598_16345 PF07194 P2 response regulator binding domain J6598_16345 PF01627 Hpt domain J6598_16345 PF01584 CheW-like domain J6598_16345 PF02895 Signal transducing histidine kinase, homodimeric domain J6598_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_16350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_16350 PF12729 Four helix bundle sensory module for signal transduction J6598_16350 PF00672 HAMP domain J6598_16355 PF01584 CheW-like domain J6598_16360 PF00672 HAMP domain J6598_16360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_16365 PF03705 CheR methyltransferase, all-alpha domain J6598_16365 PF01739 CheR methyltransferase, SAM binding domain J6598_16370 PF03975 CheD chemotactic sensory transduction J6598_16375 PF01339 CheB methylesterase J6598_16375 PF00072 Response regulator receiver domain J6598_16380 PF00575 S1 RNA binding domain J6598_16380 PF03725 3' exoribonuclease family, domain 2 J6598_16380 PF01138 3' exoribonuclease family, domain 1 J6598_16380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J6598_16380 PF00013 KH domain J6598_16385 PF00312 Ribosomal protein S15 J6598_16390 PF01509 TruB family pseudouridylate synthase (N terminal domain) J6598_16390 PF16198 tRNA pseudouridylate synthase B C-terminal domain J6598_16390 PF09157 Pseudouridine synthase II TruB, C-terminal J6598_16395 PF02033 Ribosome-binding factor A J6598_16400 PF11987 Translation-initiation factor 2 J6598_16400 PF08364 Bacterial translation initiation factor IF-2 associated region J6598_16400 PF00009 Elongation factor Tu GTP binding domain J6598_16400 PF04760 Translation initiation factor IF-2, N-terminal region J6598_16405 PF13184 NusA-like KH domain J6598_16405 PF08529 NusA N-terminal domain J6598_16405 PF00575 S1 RNA binding domain J6598_16410 PF02576 RimP N-terminal domain J6598_16410 PF17384 RimP C-terminal SH3 domain J6598_16425 PF03840 Preprotein translocase SecG subunit J6598_16430 PF00121 Triosephosphate isomerase J6598_16435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J6598_16435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J6598_16435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J6598_16435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J6598_16440 PF00809 Pterin binding enzyme J6598_16445 PF00004 ATPase family associated with various cellular activities (AAA) J6598_16445 PF17862 AAA+ lid domain J6598_16445 PF06480 FtsH Extracellular J6598_16445 PF01434 Peptidase family M41 J6598_16450 PF01728 FtsJ-like methyltransferase J6598_16455 PF01985 CRS1 / YhbY (CRM) domain J6598_16465 PF01272 Transcription elongation factor, GreA/GreB, C-term J6598_16465 PF03449 Transcription elongation factor, N-terminal J6598_16470 PF13677 Membrane MotB of proton-channel complex MotA/MotB J6598_16470 PF00691 OmpA family J6598_16475 PF01618 MotA/TolQ/ExbB proton channel family J6598_16480 PF02609 Exonuclease VII small subunit J6598_16485 PF00348 Polyprenyl synthetase J6598_16490 PF02780 Transketolase, C-terminal domain J6598_16490 PF02779 Transketolase, pyrimidine binding domain J6598_16490 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J6598_16495 PF00528 Binding-protein-dependent transport system inner membrane component J6598_16495 PF12911 N-terminal TM domain of oligopeptide transport permease C J6598_16500 PF00528 Binding-protein-dependent transport system inner membrane component J6598_16505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6598_16510 PF00005 ABC transporter J6598_16510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_16515 PF04608 Phosphatidylglycerophosphatase A J6598_16520 PF02769 AIR synthase related protein, C-terminal domain J6598_16520 PF00586 AIR synthase related protein, N-terminal domain J6598_16525 PF01029 NusB family J6598_16530 PF00885 6,7-dimethyl-8-ribityllumazine synthase J6598_16540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J6598_16540 PF00925 GTP cyclohydrolase II J6598_16545 PF00677 Lumazine binding domain J6598_16550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J6598_16550 PF01872 RibD C-terminal domain J6598_16555 PF03477 ATP cone domain J6598_16560 PF00464 Serine hydroxymethyltransferase J6598_16570 PF00072 Response regulator receiver domain J6598_16570 PF01627 Hpt domain J6598_16570 PF00512 His Kinase A (phospho-acceptor) domain J6598_16570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_16570 PF00672 HAMP domain J6598_16575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J6598_16585 PF00072 Response regulator receiver domain J6598_16585 PF00486 Transcriptional regulatory protein, C terminal J6598_16590 PF03264 NapC/NirT cytochrome c family, N-terminal region J6598_16595 PF00384 Molybdopterin oxidoreductase J6598_16595 PF18364 Molybdopterin oxidoreductase N-terminal domain J6598_16595 PF01568 Molydopterin dinucleotide binding domain J6598_16600 PF02613 Nitrate reductase delta subunit J6598_16610 PF00990 Diguanylate cyclase, GGDEF domain J6598_16610 PF03707 Bacterial signalling protein N terminal repeat J6598_16610 PF00563 EAL domain J6598_16615 PF13193 AMP-binding enzyme C-terminal domain J6598_16615 PF16177 Acetyl-coenzyme A synthetase N-terminus J6598_16615 PF00501 AMP-binding enzyme J6598_16620 PF01220 Dehydroquinase class II J6598_16625 PF00364 Biotin-requiring enzyme J6598_16630 PF02785 Biotin carboxylase C-terminal domain J6598_16630 PF00289 Biotin carboxylase, N-terminal domain J6598_16630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6598_16640 PF00474 Sodium:solute symporter family J6598_16645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J6598_16645 PF00367 phosphotransferase system, EIIB J6598_16645 PF02378 Phosphotransferase system, EIIC J6598_16650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_16650 PF03466 LysR substrate binding domain J6598_16655 PF00107 Zinc-binding dehydrogenase J6598_16655 PF08240 Alcohol dehydrogenase GroES-like domain J6598_16665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6598_16665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6598_16670 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_16670 PF12464 Maltose acetyltransferase J6598_16675 PF00881 Nitroreductase family J6598_16680 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_16680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6598_16685 PF01343 Peptidase family S49 J6598_16690 PF03734 L,D-transpeptidase catalytic domain J6598_16690 PF17969 L,D-transpeptidase C-terminal domain J6598_16705 PF02472 Biopolymer transport protein ExbD/TolR J6598_16710 PF01618 MotA/TolQ/ExbB proton channel family J6598_16715 PF01618 MotA/TolQ/ExbB proton channel family J6598_16725 PF00593 TonB dependent receptor J6598_16725 PF07715 TonB-dependent Receptor Plug Domain J6598_16730 PF00528 Binding-protein-dependent transport system inner membrane component J6598_16735 PF00528 Binding-protein-dependent transport system inner membrane component J6598_16735 PF12911 N-terminal TM domain of oligopeptide transport permease C J6598_16745 PF00005 ABC transporter J6598_16745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_16750 PF00005 ABC transporter J6598_16750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6598_16760 PF01370 NAD dependent epimerase/dehydratase family J6598_16770 PF01791 DeoC/LacD family aldolase J6598_16775 PF01773 Na+ dependent nucleoside transporter N-terminus J6598_16775 PF07670 Nucleoside recognition J6598_16775 PF07662 Na+ dependent nucleoside transporter C-terminus J6598_16780 PF01048 Phosphorylase superfamily J6598_16785 PF03466 LysR substrate binding domain J6598_16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_16790 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) J6598_16800 PF01464 Transglycosylase SLT domain J6598_16815 PF12848 ABC transporter J6598_16815 PF00005 ABC transporter J6598_16825 PF00860 Permease family J6598_16830 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6598_16835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_16835 PF00672 HAMP domain J6598_16845 PF00313 'Cold-shock' DNA-binding domain J6598_16885 PF00929 Exonuclease J6598_16890 PF03193 RsgA GTPase J6598_16895 PF02666 Phosphatidylserine decarboxylase J6598_16900 PF09905 DNA-binding protein VF530 J6598_16915 PF00171 Aldehyde dehydrogenase family J6598_16920 PF01472 PUA domain J6598_16920 PF00696 Amino acid kinase family J6598_16925 PF07417 Sigma factor-binding transcriptional regulator Crl J6598_16930 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) J6598_16935 PF00156 Phosphoribosyl transferase domain J6598_16940 PF07687 Peptidase dimerisation domain J6598_16940 PF01546 Peptidase family M20/M25/M40 J6598_16945 PF00226 DnaJ domain J6598_16945 PF05099 Tellurite resistance protein TerB J6598_16950 PF00483 Nucleotidyl transferase J6598_16955 PF01636 Phosphotransferase enzyme family J6598_16960 PF04453 LPS transport system D J6598_16960 PF03968 OstA-like protein J6598_16965 PF00639 PPIC-type PPIASE domain J6598_16965 PF09312 SurA N-terminal domain J6598_16970 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J6598_16975 PF00398 Ribosomal RNA adenine dimethylase J6598_16980 PF04379 ApaG domain J6598_16985 PF00149 Calcineurin-like phosphoesterase J6598_17000 PF00296 Luciferase-like monooxygenase J6598_17015 PF07670 Nucleoside recognition J6598_17020 PF01926 50S ribosome-binding GTPase J6598_17020 PF01018 GTP1/OBG J6598_17025 PF01016 Ribosomal L27 protein J6598_17030 PF00829 Ribosomal prokaryotic L21 protein J6598_17035 PF00348 Polyprenyl synthetase J6598_17040 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) J6598_17045 PF01145 SPFH domain / Band 7 family J6598_17050 PF01145 SPFH domain / Band 7 family J6598_17050 PF12221 Bacterial membrane protein N terminal J6598_17055 PF16360 GTP-binding GTPase Middle Region J6598_17055 PF13167 GTP-binding GTPase N-terminal J6598_17055 PF01926 50S ribosome-binding GTPase J6598_17060 PF17209 Hfq protein J6598_17070 PF08676 MutL C terminal dimerisation domain J6598_17070 PF01119 DNA mismatch repair protein, C-terminal domain J6598_17075 PF01119 DNA mismatch repair protein, C-terminal domain J6598_17075 PF08676 MutL C terminal dimerisation domain J6598_17080 PF01520 N-acetylmuramoyl-L-alanine amidase J6598_17085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J6598_17090 PF03853 YjeF-related protein N-terminus J6598_17090 PF01256 Carbohydrate kinase J6598_17095 PF08331 Domain of unknown function (DUF1730) J6598_17100 PF00480 ROK family J6598_17110 PF09383 NIL domain J6598_17110 PF00005 ABC transporter J6598_17115 PF00528 Binding-protein-dependent transport system inner membrane component J6598_17120 PF03180 NLPA lipoprotein J6598_17125 PF02357 Transcription termination factor nusG J6598_17130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_17130 PF00672 HAMP domain J6598_17135 PF03707 Bacterial signalling protein N terminal repeat J6598_17135 PF00990 Diguanylate cyclase, GGDEF domain J6598_17135 PF00563 EAL domain J6598_17140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_17140 PF00072 Response regulator receiver domain J6598_17140 PF09456 RcsC Alpha-Beta-Loop (ABL) J6598_17140 PF00512 His Kinase A (phospho-acceptor) domain J6598_17150 PF13286 Phosphohydrolase-associated domain J6598_17150 PF01966 HD domain J6598_17155 PF00072 Response regulator receiver domain J6598_17155 PF00989 PAS fold J6598_17155 PF01627 Hpt domain J6598_17155 PF18415 Histidine kinase receptor ArcB trans-membrane domain J6598_17155 PF00512 His Kinase A (phospho-acceptor) domain J6598_17155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_17175 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J6598_17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_17180 PF03466 LysR substrate binding domain J6598_17190 PF01259 SAICAR synthetase J6598_17195 PF06804 NlpB/DapX lipoprotein J6598_17200 PF00701 Dihydrodipicolinate synthetase family J6598_17205 PF01842 ACT domain J6598_17210 PF00578 AhpC/TSA family J6598_17215 PF03887 YfbU domain J6598_17220 PF04217 Protein of unknown function, DUF412 J6598_17225 PF00871 Acetokinase family J6598_17230 PF07085 DRTGG domain J6598_17230 PF01515 Phosphate acetyl/butaryl transferase J6598_17240 PF00483 Nucleotidyl transferase J6598_17245 PF00854 POT family J6598_17255 PF00072 Response regulator receiver domain J6598_17285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6598_17290 PF02321 Outer membrane efflux protein J6598_17295 PF01207 Dihydrouridine synthase (Dus) J6598_17300 PF02954 Bacterial regulatory protein, Fis family J6598_17320 PF01546 Peptidase family M20/M25/M40 J6598_17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_17325 PF03466 LysR substrate binding domain J6598_17330 PF01810 LysE type translocator J6598_17335 PF10369 Small subunit of acetolactate synthase J6598_17340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6598_17340 PF00205 Thiamine pyrophosphate enzyme, central domain J6598_17340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6598_17355 PF01569 PAP2 superfamily J6598_17370 PF08502 LeuA allosteric (dimerisation) domain J6598_17370 PF00682 HMGL-like J6598_17375 PF00180 Isocitrate/isopropylmalate dehydrogenase J6598_17380 PF00330 Aconitase family (aconitate hydratase) J6598_17385 PF00694 Aconitase C-terminal domain J6598_17405 PF00528 Binding-protein-dependent transport system inner membrane component J6598_17410 PF00005 ABC transporter J6598_17415 PF02562 PhoH-like protein J6598_17415 PF13638 PIN domain J6598_17425 PF02867 Ribonucleotide reductase, barrel domain J6598_17425 PF00317 Ribonucleotide reductase, all-alpha domain J6598_17425 PF08343 Ribonucleotide reductase N-terminal J6598_17455 PF03707 Bacterial signalling protein N terminal repeat J6598_17455 PF00563 EAL domain J6598_17455 PF00990 Diguanylate cyclase, GGDEF domain J6598_17465 PF00118 TCP-1/cpn60 chaperonin family J6598_17470 PF00166 Chaperonin 10 Kd subunit J6598_17475 PF01554 MatE J6598_17480 PF04186 FxsA cytoplasmic membrane protein J6598_17485 PF00206 Lyase J6598_17485 PF10415 Fumarase C C-terminus J6598_17490 PF03605 Anaerobic c4-dicarboxylate membrane transporter J6598_17495 PF00814 Glycoprotease family J6598_17500 PF01165 Ribosomal protein S21 J6598_17505 PF09424 Yqey-like protein J6598_17510 PF10410 DnaB-helicase binding domain of primase J6598_17510 PF08278 DNA primase DnaG DnaB-binding J6598_17510 PF08275 DNA primase catalytic core, N-terminal domain J6598_17510 PF01807 CHC2 zinc finger J6598_17515 PF04546 Sigma-70, non-essential region J6598_17515 PF04542 Sigma-70 region 2 J6598_17515 PF00140 Sigma-70 factor, region 1.2 J6598_17515 PF04539 Sigma-70 region 3 J6598_17515 PF04545 Sigma-70, region 4 J6598_17515 PF03979 Sigma-70 factor, region 1.1 J6598_17535 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J6598_17535 PF02843 Phosphoribosylglycinamide synthetase, C domain J6598_17535 PF02844 Phosphoribosylglycinamide synthetase, N domain J6598_17540 PF01808 AICARFT/IMPCHase bienzyme J6598_17540 PF02142 MGS-like domain J6598_17545 PF13411 MerR HTH family regulatory protein J6598_17550 PF03889 Alternative ribosome-rescue factor A J6598_17555 PF06969 HemN C-terminal domain J6598_17555 PF04055 Radical SAM superfamily J6598_17560 PF01725 Ham1 family J6598_17565 PF07690 Major Facilitator Superfamily J6598_17570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J6598_17570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J6598_17580 PF13302 Acetyltransferase (GNAT) domain J6598_17585 PF13302 Acetyltransferase (GNAT) domain J6598_17590 PF07504 Fungalysin/Thermolysin Propeptide Motif J6598_17590 PF03413 Peptidase propeptide and YPEB domain J6598_17590 PF01447 Thermolysin metallopeptidase, catalytic domain J6598_17590 PF02868 Thermolysin metallopeptidase, alpha-helical domain J6598_17590 PF04151 Bacterial pre-peptidase C-terminal domain J6598_17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_17595 PF03466 LysR substrate binding domain J6598_17600 PF07690 Major Facilitator Superfamily J6598_17605 PF00583 Acetyltransferase (GNAT) family J6598_17615 PF16658 Class II release factor RF3, C-terminal domain J6598_17615 PF00009 Elongation factor Tu GTP binding domain J6598_17615 PF03144 Elongation factor Tu domain 2 J6598_17625 PF00990 Diguanylate cyclase, GGDEF domain J6598_17630 PF05762 VWA domain containing CoxE-like protein J6598_17635 PF07728 AAA domain (dynein-related subfamily) J6598_17635 PF17868 AAA lid domain J6598_17635 PF12592 Protein of unknown function (DUF3763) J6598_17655 PF00501 AMP-binding enzyme J6598_17660 PF04262 Glutamate-cysteine ligase J6598_17665 PF00675 Insulinase (Peptidase family M16) J6598_17665 PF05193 Peptidase M16 inactive domain J6598_17670 PF09335 SNARE associated Golgi protein J6598_17675 PF08240 Alcohol dehydrogenase GroES-like domain J6598_17675 PF00107 Zinc-binding dehydrogenase J6598_17700 PF00175 Oxidoreductase NAD-binding domain J6598_17700 PF00970 Oxidoreductase FAD-binding domain J6598_17705 PF03948 Ribosomal protein L9, C-terminal domain J6598_17705 PF01281 Ribosomal protein L9, N-terminal domain J6598_17710 PF01084 Ribosomal protein S18 J6598_17715 PF01250 Ribosomal protein S6 J6598_17720 PF01566 Natural resistance-associated macrophage protein J6598_17725 PF02272 DHHA1 domain J6598_17725 PF01411 tRNA synthetases class II (A) J6598_17725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J6598_17735 PF00216 Bacterial DNA-binding protein J6598_17740 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ J6598_17745 PF07238 PilZ domain J6598_17750 PF18073 Rubredoxin metal binding domain J6598_17765 PF18429 Domain of unknown function (DUF5609) J6598_17775 PF01048 Phosphorylase superfamily J6598_17780 PF01676 Metalloenzyme superfamily J6598_17785 PF02885 Glycosyl transferase family, helical bundle domain J6598_17785 PF00591 Glycosyl transferase family, a/b domain J6598_17785 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J6598_17790 PF01791 DeoC/LacD family aldolase J6598_17800 PF07662 Na+ dependent nucleoside transporter C-terminus J6598_17800 PF01773 Na+ dependent nucleoside transporter N-terminus J6598_17800 PF07670 Nucleoside recognition J6598_17805 PF01026 TatD related DNase J6598_17810 PF07963 Prokaryotic N-terminal methylation motif J6598_17820 PF02664 S-Ribosylhomocysteinase (LuxS) J6598_17830 PF00543 Nitrogen regulatory protein P-II J6598_17835 PF02540 NAD synthase J6598_17835 PF00795 Carbon-nitrogen hydrolase J6598_17855 PF05567 Neisseria PilC beta-propeller domain J6598_17875 PF07963 Prokaryotic N-terminal methylation motif J6598_17875 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor J6598_17880 PF02401 LytB protein J6598_17885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6598_17890 PF01252 Signal peptidase (SPase) II J6598_17895 PF08264 Anticodon-binding domain of tRNA J6598_17895 PF06827 Zinc finger found in FPG and IleRS J6598_17895 PF00133 tRNA synthetases class I (I, L, M and V) J6598_17900 PF06574 FAD synthetase J6598_17900 PF01687 Riboflavin kinase J6598_17905 PF03023 Lipid II flippase MurJ J6598_17910 PF01649 Ribosomal protein S20 J6598_17915 PF01022 Bacterial regulatory protein, arsR family J6598_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_17920 PF03466 LysR substrate binding domain J6598_17930 PF06965 Na+/H+ antiporter 1 J6598_17935 PF00303 Thymidylate synthase J6598_17940 PF01790 Prolipoprotein diacylglyceryl transferase J6598_17945 PF02896 PEP-utilising enzyme, TIM barrel domain J6598_17945 PF00391 PEP-utilising enzyme, mobile domain J6598_17945 PF05524 PEP-utilising enzyme, N-terminal J6598_17945 PF01590 GAF domain J6598_17950 PF00293 NUDIX domain J6598_17955 PF02976 DNA mismatch repair enzyme MutH J6598_17970 PF01245 Ribosomal protein L19 J6598_17975 PF01746 tRNA (Guanine-1)-methyltransferase J6598_17980 PF01782 RimM N-terminal domain J6598_17980 PF05239 PRC-barrel domain J6598_17985 PF00886 Ribosomal protein S16 J6598_17990 PF02978 Signal peptide binding domain J6598_17990 PF02881 SRP54-type protein, helical bundle domain J6598_17990 PF00448 SRP54-type protein, GTPase domain J6598_17995 PF01578 Cytochrome C assembly protein J6598_18000 PF01595 Cyclin M transmembrane N-terminal domain J6598_18000 PF00571 CBS domain J6598_18000 PF03471 Transporter associated domain J6598_18005 PF02082 Transcriptional regulator J6598_18010 PF00970 Oxidoreductase FAD-binding domain J6598_18010 PF00042 Globin J6598_18010 PF00175 Oxidoreductase NAD-binding domain J6598_18015 PF08238 Sel1 repeat J6598_18020 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J6598_18020 PF00056 lactate/malate dehydrogenase, NAD binding domain J6598_18025 PF00528 Binding-protein-dependent transport system inner membrane component J6598_18030 PF00528 Binding-protein-dependent transport system inner membrane component J6598_18035 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_18040 PF00005 ABC transporter J6598_18045 PF01316 Arginine repressor, DNA binding domain J6598_18045 PF02863 Arginine repressor, C-terminal domain J6598_18050 PF04261 Dyp-type peroxidase family J6598_18055 PF00005 ABC transporter J6598_18055 PF08402 TOBE domain J6598_18065 PF13416 Bacterial extracellular solute-binding protein J6598_18070 PF00543 Nitrogen regulatory protein P-II J6598_18075 PF00472 RF-1 domain J6598_18080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6598_18080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6598_18090 PF03883 Peroxide stress protein YaaA J6598_18095 PF00437 Type II/IV secretion system protein J6598_18100 PF00437 Type II/IV secretion system protein J6598_18105 PF01168 Alanine racemase, N-terminal domain J6598_18110 PF03807 NADP oxidoreductase coenzyme F420-dependent J6598_18110 PF14748 Pyrroline-5-carboxylate reductase dimerisation J6598_18115 PF02325 YGGT family J6598_18120 PF02594 Uncharacterised ACR, YggU family COG1872 J6598_18130 PF07670 Nucleoside recognition J6598_18130 PF07662 Na+ dependent nucleoside transporter C-terminus J6598_18130 PF01773 Na+ dependent nucleoside transporter N-terminus J6598_18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_18135 PF03466 LysR substrate binding domain J6598_18140 PF00255 Glutathione peroxidase J6598_18150 PF02595 Glycerate kinase family J6598_18155 PF02447 GntP family permease J6598_18160 PF05651 Putative sugar diacid recognition J6598_18160 PF13556 PucR C-terminal helix-turn-helix domain J6598_18160 PF17853 GGDEF-like domain J6598_18165 PF06062 Uncharacterised protein family (UPF0231) J6598_18185 PF03372 Endonuclease/Exonuclease/phosphatase family J6598_18195 PF00271 Helicase conserved C-terminal domain J6598_18195 PF00270 DEAD/DEAH box helicase J6598_18205 PF08534 Redoxin J6598_18210 PF00403 Heavy-metal-associated domain J6598_18215 PF11852 Domain of unknown function (DUF3372) J6598_18215 PF18494 Pullulanase Ins domain J6598_18215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J6598_18215 PF03714 Bacterial pullanase-associated domain J6598_18215 PF17967 Pullulanase N2 domain J6598_18230 PF02583 Metal-sensitive transcriptional repressor J6598_18235 PF00155 Aminotransferase class I and II J6598_18240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_18240 PF03466 LysR substrate binding domain J6598_18250 PF04055 Radical SAM superfamily J6598_18255 PF11230 Protein of unknown function (DUF3029) J6598_18280 PF00175 Oxidoreductase NAD-binding domain J6598_18280 PF00111 2Fe-2S iron-sulfur cluster binding domain J6598_18280 PF00970 Oxidoreductase FAD-binding domain J6598_18295 PF00535 Glycosyl transferase family 2 J6598_18300 PF14883 Hypothetical glycosyl hydrolase family 13 J6598_18300 PF01522 Polysaccharide deacetylase J6598_18315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_18315 PF12729 Four helix bundle sensory module for signal transduction J6598_18315 PF00672 HAMP domain J6598_18320 PF18416 N-acetylglucosamine binding protein domain 2 J6598_18320 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J6598_18325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_18325 PF03466 LysR substrate binding domain J6598_18330 PF00005 ABC transporter J6598_18330 PF12857 TOBE-like domain J6598_18335 PF00528 Binding-protein-dependent transport system inner membrane component J6598_18340 PF00528 Binding-protein-dependent transport system inner membrane component J6598_18355 PF13194 Domain of unknown function (DUF4010) J6598_18360 PF14602 Hexapeptide repeat of succinyl-transferase J6598_18360 PF12464 Maltose acetyltransferase J6598_18375 PF13419 Haloacid dehalogenase-like hydrolase J6598_18380 PF00293 NUDIX domain J6598_18385 PF00459 Inositol monophosphatase family J6598_18390 PF03222 Tryptophan/tyrosine permease family J6598_18395 PF01588 Putative tRNA binding domain J6598_18400 PF12833 Helix-turn-helix domain J6598_18400 PF02311 AraC-like ligand binding domain J6598_18405 PF01340 Met Apo-repressor, MetJ J6598_18410 PF01053 Cys/Met metabolism PLP-dependent enzyme J6598_18415 PF00742 Homoserine dehydrogenase J6598_18415 PF03447 Homoserine dehydrogenase, NAD binding domain J6598_18415 PF00696 Amino acid kinase family J6598_18420 PF01384 Phosphate transporter family J6598_18425 PF01865 Protein of unknown function DUF47 J6598_18435 PF00701 Dihydrodipicolinate synthetase family J6598_18440 PF05175 Methyltransferase small domain J6598_18440 PF08468 Methyltransferase small domain N-terminal J6598_18445 PF00483 Nucleotidyl transferase J6598_18450 PF08323 Starch synthase catalytic domain J6598_18450 PF00534 Glycosyl transferases group 1 J6598_18490 PF03553 Na+/H+ antiporter family J6598_18495 PF01521 Iron-sulphur cluster biosynthesis J6598_18505 PF00654 Voltage gated chloride channel J6598_18510 PF00202 Aminotransferase class-III J6598_18525 PF13462 Thioredoxin J6598_18525 PF06965 Na+/H+ antiporter 1 J6598_18560 PF07883 Cupin domain J6598_18560 PF01381 Helix-turn-helix J6598_18565 PF03594 Benzoate membrane transport protein J6598_18575 PF02219 Methylenetetrahydrofolate reductase J6598_18590 PF00672 HAMP domain J6598_18590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_18595 PF03922 OmpW family J6598_18600 PF08448 PAS fold J6598_18600 PF00990 Diguanylate cyclase, GGDEF domain J6598_18605 PF00005 ABC transporter J6598_18605 PF17755 UvrA DNA-binding domain J6598_18605 PF17760 UvrA interaction domain J6598_18625 PF03783 Curli production assembly/transport component CsgG J6598_18635 PF10627 Curli assembly protein CsgE J6598_18640 PF00196 Bacterial regulatory proteins, luxR family J6598_18645 PF00436 Single-strand binding protein family J6598_18655 PF01545 Cation efflux family J6598_18655 PF16916 Dimerisation domain of Zinc Transporter J6598_18665 PF00313 'Cold-shock' DNA-binding domain J6598_18670 PF00860 Permease family J6598_18675 PF02733 Dak1 domain J6598_18680 PF02734 DAK2 domain J6598_18685 PF00391 PEP-utilising enzyme, mobile domain J6598_18685 PF00381 PTS HPr component phosphorylation site J6598_18685 PF03610 PTS system fructose IIA component J6598_18685 PF05524 PEP-utilising enzyme, N-terminal J6598_18690 PF00465 Iron-containing alcohol dehydrogenase J6598_18695 PF00158 Sigma-54 interaction domain J6598_18695 PF02954 Bacterial regulatory protein, Fis family J6598_18695 PF00989 PAS fold J6598_18705 PF01594 AI-2E family transporter J6598_18710 PF00293 NUDIX domain J6598_18720 PF01479 S4 domain J6598_18725 PF01430 Hsp33 protein J6598_18730 PF01293 Phosphoenolpyruvate carboxykinase J6598_18735 PF00392 Bacterial regulatory proteins, gntR family J6598_18740 PF01321 Creatinase/Prolidase N-terminal domain J6598_18740 PF00557 Metallopeptidase family M24 J6598_18745 PF11756 Nitrous oxide-stimulated promoter J6598_18750 PF00583 Acetyltransferase (GNAT) family J6598_18755 PF05433 Glycine zipper 2TM domain J6598_18760 PF00909 Ammonium Transporter Family J6598_18765 PF00990 Diguanylate cyclase, GGDEF domain J6598_18765 PF08448 PAS fold J6598_18775 PF06055 Exopolysaccharide synthesis, ExoD J6598_18785 PF00990 Diguanylate cyclase, GGDEF domain J6598_18795 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_18820 PF06968 Biotin and Thiamin Synthesis associated domain J6598_18820 PF04055 Radical SAM superfamily J6598_18825 PF05690 Thiazole biosynthesis protein ThiG J6598_18835 PF00899 ThiF family J6598_18840 PF02581 Thiamine monophosphate synthase J6598_18845 PF01964 Radical SAM ThiC family J6598_18845 PF13667 ThiC-associated domain J6598_18850 PF03440 Aerolysin/Pertussis toxin (APT) domain J6598_18850 PF01117 Aerolysin toxin J6598_18865 PF00486 Transcriptional regulatory protein, C terminal J6598_18865 PF00072 Response regulator receiver domain J6598_18870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_18875 PF08443 RimK-like ATP-grasp domain J6598_18875 PF18030 RimK PreATP-grasp domain J6598_18880 PF02607 B12 binding domain J6598_18880 PF02574 Homocysteine S-methyltransferase J6598_18880 PF02310 B12 binding domain J6598_18880 PF02965 Vitamin B12 dependent methionine synthase, activation domain J6598_18880 PF00809 Pterin binding enzyme J6598_18885 PF00999 Sodium/hydrogen exchanger family J6598_18910 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) J6598_18920 PF07690 Major Facilitator Superfamily J6598_18925 PF01914 MarC family integral membrane protein J6598_18935 PF01523 Putative modulator of DNA gyrase J6598_18940 PF00795 Carbon-nitrogen hydrolase J6598_18950 PF13502 AsmA-like C-terminal region J6598_18950 PF13116 Protein of unknown function J6598_18955 PF10150 Ribonuclease E/G family J6598_18955 PF00575 S1 RNA binding domain J6598_18960 PF02545 Maf-like protein J6598_18965 PF04093 rod shape-determining protein MreD J6598_18970 PF04085 rod shape-determining protein MreC J6598_19000 PF07963 Prokaryotic N-terminal methylation motif J6598_19000 PF14245 Type IV pilin PilA J6598_19005 PF07963 Prokaryotic N-terminal methylation motif J6598_19020 PF00482 Type II secretion system (T2SS), protein F J6598_19025 PF00437 Type II/IV secretion system protein J6598_19025 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J6598_19040 PF03958 Bacterial type II/III secretion system short domain J6598_19040 PF00263 Bacterial type II and III secretion system protein J6598_19070 PF00990 Diguanylate cyclase, GGDEF domain J6598_19070 PF00563 EAL domain J6598_19070 PF17157 Gammaproteobacterial periplasmic sensor domain J6598_19075 PF12792 CSS motif domain associated with EAL J6598_19075 PF00563 EAL domain J6598_19080 PF01699 Sodium/calcium exchanger protein J6598_19085 PF00221 Aromatic amino acid lyase J6598_19090 PF01175 Urocanase Rossmann-like domain J6598_19090 PF17392 Urocanase C-terminal domain J6598_19090 PF17391 Urocanase N-terminal domain J6598_19095 PF00491 Arginase family J6598_19100 PF01979 Amidohydrolase family J6598_19105 PF00392 Bacterial regulatory proteins, gntR family J6598_19105 PF07702 UTRA domain J6598_19110 PF00484 Carbonic anhydrase J6598_19115 PF00140 Sigma-70 factor, region 1.2 J6598_19115 PF04545 Sigma-70, region 4 J6598_19115 PF04542 Sigma-70 region 2 J6598_19120 PF18075 FtsX extracellular domain J6598_19125 PF00005 ABC transporter J6598_19130 PF02881 SRP54-type protein, helical bundle domain J6598_19130 PF00448 SRP54-type protein, GTPase domain J6598_19155 PF02254 TrkA-N domain J6598_19155 PF00999 Sodium/hydrogen exchanger family J6598_19160 PF02525 Flavodoxin-like fold J6598_19165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_19165 PF03466 LysR substrate binding domain J6598_19170 PF00106 short chain dehydrogenase J6598_19185 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J6598_19185 PF00326 Prolyl oligopeptidase family J6598_19200 PF13091 PLD-like domain J6598_19210 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_19210 PF01464 Transglycosylase SLT domain J6598_19220 PF02416 mttA/Hcf106 family J6598_19225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_19225 PF03466 LysR substrate binding domain J6598_19230 PF01914 MarC family integral membrane protein J6598_19235 PF10678 Protein of unknown function (DUF2492) J6598_19240 PF00375 Sodium:dicarboxylate symporter family J6598_19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_19250 PF03466 LysR substrate binding domain J6598_19255 PF13533 Biotin-lipoyl like J6598_19260 PF07690 Major Facilitator Superfamily J6598_19265 PF07947 YhhN family J6598_19280 PF00440 Bacterial regulatory proteins, tetR family J6598_19295 PF01548 Transposase J6598_19295 PF02371 Transposase IS116/IS110/IS902 family J6598_19340 PF03143 Elongation factor Tu C-terminal domain J6598_19340 PF03144 Elongation factor Tu domain 2 J6598_19340 PF00009 Elongation factor Tu GTP binding domain J6598_19345 PF03144 Elongation factor Tu domain 2 J6598_19345 PF03764 Elongation factor G, domain IV J6598_19345 PF14492 Elongation Factor G, domain II J6598_19345 PF00679 Elongation factor G C-terminus J6598_19345 PF00009 Elongation factor Tu GTP binding domain J6598_19350 PF00177 Ribosomal protein S7p/S5e J6598_19355 PF00164 Ribosomal protein S12/S23 J6598_19360 PF04077 DsrH like protein J6598_19365 PF02635 DsrE/DsrF-like family J6598_19370 PF02635 DsrE/DsrF-like family J6598_19375 PF01042 Endoribonuclease L-PSP J6598_19380 PF08348 YheO-like PAS domain J6598_19380 PF13309 HTH domain J6598_19385 PF04997 RNA polymerase Rpb1, domain 1 J6598_19385 PF05000 RNA polymerase Rpb1, domain 4 J6598_19385 PF04998 RNA polymerase Rpb1, domain 5 J6598_19385 PF04983 RNA polymerase Rpb1, domain 3 J6598_19385 PF00623 RNA polymerase Rpb1, domain 2 J6598_19390 PF04561 RNA polymerase Rpb2, domain 2 J6598_19390 PF04565 RNA polymerase Rpb2, domain 3 J6598_19390 PF10385 RNA polymerase beta subunit external 1 domain J6598_19390 PF00562 RNA polymerase Rpb2, domain 6 J6598_19390 PF04560 RNA polymerase Rpb2, domain 7 J6598_19390 PF04563 RNA polymerase beta subunit J6598_19395 PF00542 Ribosomal protein L7/L12 C-terminal domain J6598_19395 PF16320 Ribosomal protein L7/L12 dimerisation domain J6598_19400 PF00466 Ribosomal protein L10 J6598_19405 PF00687 Ribosomal protein L1p/L10e family J6598_19410 PF00298 Ribosomal protein L11, RNA binding domain J6598_19410 PF03946 Ribosomal protein L11, N-terminal domain J6598_19415 PF00467 KOW motif J6598_19415 PF02357 Transcription termination factor nusG J6598_19420 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J6598_19430 PF03143 Elongation factor Tu C-terminal domain J6598_19430 PF03144 Elongation factor Tu domain 2 J6598_19430 PF00009 Elongation factor Tu GTP binding domain J6598_19445 PF00485 Phosphoribulokinase / Uridine kinase family J6598_19450 PF03099 Biotin/lipoate A/B protein ligase family J6598_19450 PF08279 HTH domain J6598_19450 PF02237 Biotin protein ligase C terminal domain J6598_19455 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J6598_19455 PF01565 FAD binding domain J6598_19460 PF02254 TrkA-N domain J6598_19460 PF02080 TrkA-C domain J6598_19465 PF02386 Cation transport protein J6598_19485 PF01131 DNA topoisomerase J6598_19485 PF01751 Toprim domain J6598_19495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_19495 PF00512 His Kinase A (phospho-acceptor) domain J6598_19495 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6598_19500 PF03264 NapC/NirT cytochrome c family, N-terminal region J6598_19505 PF01568 Molydopterin dinucleotide binding domain J6598_19505 PF18364 Molybdopterin oxidoreductase N-terminal domain J6598_19505 PF00384 Molybdopterin oxidoreductase J6598_19515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_19520 PF00072 Response regulator receiver domain J6598_19520 PF00486 Transcriptional regulatory protein, C terminal J6598_19535 PF01794 Ferric reductase like transmembrane component J6598_19540 PF00174 Oxidoreductase molybdopterin binding domain J6598_19545 PF06496 Protein of unknown function (DUF1097) J6598_19550 PF00072 Response regulator receiver domain J6598_19550 PF00158 Sigma-54 interaction domain J6598_19560 PF00512 His Kinase A (phospho-acceptor) domain J6598_19560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_19580 PF00571 CBS domain J6598_19580 PF00478 IMP dehydrogenase / GMP reductase domain J6598_19585 PF10063 Uncharacterized integral membrane protein (DUF2301) J6598_19595 PF01037 Lrp/AsnC ligand binding domain J6598_19600 PF03590 Aspartate-ammonia ligase J6598_19605 PF07724 AAA domain (Cdc48 subfamily) J6598_19605 PF17871 AAA lid domain J6598_19605 PF02861 Clp amino terminal domain, pathogenicity island component J6598_19605 PF10431 C-terminal, D2-small domain, of ClpB protein J6598_19605 PF00004 ATPase family associated with various cellular activities (AAA) J6598_19610 PF02578 Multi-copper polyphenol oxidoreductase laccase J6598_19615 PF00849 RNA pseudouridylate synthase J6598_19615 PF01479 S4 domain J6598_19620 PF13525 Outer membrane lipoprotein J6598_19625 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6598_19625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6598_19630 PF00375 Sodium:dicarboxylate symporter family J6598_19635 PF03313 Serine dehydratase alpha chain J6598_19640 PF13309 HTH domain J6598_19640 PF08348 YheO-like PAS domain J6598_19650 PF02233 NAD(P) transhydrogenase beta subunit J6598_19655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J6598_19655 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J6598_19655 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J6598_19660 PF00465 Iron-containing alcohol dehydrogenase J6598_19665 PF06719 AraC-type transcriptional regulator N-terminus J6598_19665 PF12833 Helix-turn-helix domain J6598_19670 PF08212 Lipocalin-like domain J6598_19675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_19675 PF00672 HAMP domain J6598_19675 PF02743 Cache domain J6598_19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_19685 PF03466 LysR substrate binding domain J6598_19705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6598_19705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6598_19710 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain J6598_19710 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain J6598_19715 PF01316 Arginine repressor, DNA binding domain J6598_19715 PF02863 Arginine repressor, C-terminal domain J6598_19720 PF03606 C4-dicarboxylate anaerobic carrier J6598_19725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6598_19725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6598_19730 PF00696 Amino acid kinase family J6598_19755 PF06969 HemN C-terminal domain J6598_19755 PF04055 Radical SAM superfamily J6598_19760 PF10675 Protein of unknown function (DUF2489) J6598_19765 PF04220 Der GTPase activator (YihI) J6598_19770 PF00034 Cytochrome c J6598_19775 PF01926 50S ribosome-binding GTPase J6598_19785 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J6598_19785 PF08501 Shikimate dehydrogenase substrate binding domain J6598_19785 PF01488 Shikimate / quinate 5-dehydrogenase J6598_19790 PF01218 Coproporphyrinogen III oxidase J6598_19795 PF01300 Telomere recombination J6598_19800 PF00731 AIR carboxylase J6598_19805 PF01396 Topoisomerase DNA binding C4 zinc finger J6598_19810 PF04361 Protein of unknown function (DUF494) J6598_19815 PF02481 DNA recombination-mediator protein A J6598_19815 PF17782 DprA winged helix domain J6598_19820 PF01476 LysM domain J6598_19825 PF01327 Polypeptide deformylase J6598_19830 PF00551 Formyl transferase J6598_19830 PF02911 Formyl transferase, C-terminal domain J6598_19835 PF01189 16S rRNA methyltransferase RsmB/F J6598_19835 PF01029 NusB family J6598_19840 PF02080 TrkA-C domain J6598_19840 PF02254 TrkA-N domain J6598_19845 PF02386 Cation transport protein J6598_19850 PF00679 Elongation factor G C-terminus J6598_19850 PF00009 Elongation factor Tu GTP binding domain J6598_19850 PF03144 Elongation factor Tu domain 2 J6598_19855 PF00120 Glutamine synthetase, catalytic domain J6598_19855 PF03951 Glutamine synthetase, beta-Grasp domain J6598_19865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_19865 PF00512 His Kinase A (phospho-acceptor) domain J6598_19865 PF00989 PAS fold J6598_19870 PF00158 Sigma-54 interaction domain J6598_19870 PF02954 Bacterial regulatory protein, Fis family J6598_19870 PF00072 Response regulator receiver domain J6598_19875 PF00962 Adenosine/AMP deaminase J6598_19880 PF02646 RmuC family J6598_19895 PF02082 Transcriptional regulator J6598_19900 PF00294 pfkB family carbohydrate kinase J6598_19905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_19905 PF03466 LysR substrate binding domain J6598_19910 PF00117 Glutamine amidotransferase class-I J6598_19910 PF00958 GMP synthase C terminal domain J6598_19910 PF02540 NAD synthase J6598_19915 PF00171 Aldehyde dehydrogenase family J6598_19920 PF00202 Aminotransferase class-III J6598_19925 PF01381 Helix-turn-helix J6598_19925 PF07883 Cupin domain J6598_19930 PF00171 Aldehyde dehydrogenase family J6598_19940 PF00892 EamA-like transporter family J6598_19945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_19950 PF04143 Sulphur transport J6598_19955 PF01389 OmpA-like transmembrane domain J6598_19955 PF00691 OmpA family J6598_19960 PF00585 C-terminal regulatory domain of Threonine dehydratase J6598_19960 PF00291 Pyridoxal-phosphate dependent enzyme J6598_19965 PF00920 Dehydratase family J6598_19970 PF01063 Amino-transferase class IV J6598_19980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6598_19980 PF00205 Thiamine pyrophosphate enzyme, central domain J6598_19980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6598_19985 PF01078 Magnesium chelatase, subunit ChlI J6598_19985 PF13335 Magnesium chelatase, subunit ChlI C-terminal J6598_19990 PF01553 Acyltransferase J6598_19995 PF01553 Acyltransferase J6598_20000 PF04463 Protein of unknown function (DUF523) J6598_20010 PF00857 Isochorismatase family J6598_20015 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J6598_20015 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J6598_20020 PF01323 DSBA-like thioredoxin domain J6598_20025 PF01636 Phosphotransferase enzyme family J6598_20030 PF13746 4Fe-4S dicluster domain J6598_20030 PF12801 4Fe-4S binding domain J6598_20030 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J6598_20035 PF06288 Protein of unknown function (DUF1040) J6598_20040 PF00360 Phytochrome region J6598_20040 PF00563 EAL domain J6598_20040 PF01590 GAF domain J6598_20040 PF00990 Diguanylate cyclase, GGDEF domain J6598_20045 PF13411 MerR HTH family regulatory protein J6598_20050 PF00403 Heavy-metal-associated domain J6598_20055 PF00156 Phosphoribosyl transferase domain J6598_20060 PF01138 3' exoribonuclease family, domain 1 J6598_20060 PF03725 3' exoribonuclease family, domain 2 J6598_20065 PF08340 Domain of unknown function (DUF1732) J6598_20065 PF03755 YicC-like family, N-terminal region J6598_20100 PF04471 Restriction endonuclease J6598_20100 PF14338 Mrr N-terminal domain J6598_20110 PF12161 HsdM N-terminal domain J6598_20110 PF02384 N-6 DNA Methylase J6598_20135 PF03466 LysR substrate binding domain J6598_20135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_20140 PF00107 Zinc-binding dehydrogenase J6598_20140 PF08240 Alcohol dehydrogenase GroES-like domain J6598_20145 PF00756 Putative esterase J6598_20155 PF03781 Sulfatase-modifying factor enzyme 1 J6598_20155 PF12867 DinB superfamily J6598_20160 PF13593 SBF-like CPA transporter family (DUF4137) J6598_20165 PF13520 Amino acid permease J6598_20170 PF01588 Putative tRNA binding domain J6598_20175 PF13520 Amino acid permease J6598_20180 PF04074 YhcH/YjgK/YiaL J6598_20185 PF02929 Beta galactosidase small chain J6598_20185 PF00703 Glycosyl hydrolases family 2 J6598_20185 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J6598_20185 PF02837 Glycosyl hydrolases family 2, sugar binding domain J6598_20185 PF16353 Domain of unknown function(DUF4981) J6598_20190 PF00356 Bacterial regulatory proteins, lacI family J6598_20230 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_20235 PF01367 5'-3' exonuclease, C-terminal SAM fold J6598_20235 PF00476 DNA polymerase family A J6598_20235 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J6598_20235 PF01612 3'-5' exonuclease J6598_20245 PF06005 Cell division protein ZapB J6598_20255 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_20255 PF06426 Serine acetyltransferase, N-terminal J6598_20260 PF01545 Cation efflux family J6598_20260 PF16916 Dimerisation domain of Zinc Transporter J6598_20265 PF00486 Transcriptional regulatory protein, C terminal J6598_20265 PF00072 Response regulator receiver domain J6598_20270 PF00512 His Kinase A (phospho-acceptor) domain J6598_20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_20270 PF00672 HAMP domain J6598_20270 PF16527 Two-component sensor protein CpxA, periplasmic domain J6598_20275 PF00588 SpoU rRNA Methylase family J6598_20280 PF01554 MatE J6598_20285 PF02630 SCO1/SenC J6598_20295 PF00717 Peptidase S24-like J6598_20295 PF01726 LexA DNA binding domain J6598_20300 PF01553 Acyltransferase J6598_20305 PF01040 UbiA prenyltransferase family J6598_20310 PF04345 Chorismate lyase J6598_20330 PF00107 Zinc-binding dehydrogenase J6598_20330 PF08240 Alcohol dehydrogenase GroES-like domain J6598_20335 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J6598_20340 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J6598_20345 PF00535 Glycosyl transferase family 2 J6598_20350 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J6598_20355 PF01467 Cytidylyltransferase-like J6598_20360 PF04393 Protein of unknown function (DUF535) J6598_20365 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J6598_20365 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J6598_20365 PF06827 Zinc finger found in FPG and IleRS J6598_20375 PF00471 Ribosomal protein L33 J6598_20380 PF00830 Ribosomal L28 family J6598_20385 PF04002 RadC-like JAB domain J6598_20390 PF02441 Flavoprotein J6598_20390 PF04127 DNA / pantothenate metabolism flavoprotein J6598_20395 PF00692 dUTPase J6598_20400 PF00440 Bacterial regulatory proteins, tetR family J6598_20405 PF00924 Mechanosensitive ion channel J6598_20405 PF05552 Conserved TM helix J6598_20410 PF00342 Phosphoglucose isomerase J6598_20415 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J6598_20415 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J6598_20420 PF03466 LysR substrate binding domain J6598_20420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6598_20435 PF00583 Acetyltransferase (GNAT) family J6598_20435 PF13607 Succinyl-CoA ligase like flavodoxin domain J6598_20435 PF13380 CoA binding domain J6598_20465 PF12724 Flavodoxin domain J6598_20470 PF02386 Cation transport protein J6598_20475 PF09186 Domain of unknown function (DUF1949) J6598_20475 PF01205 Uncharacterized protein family UPF0029 J6598_20480 PF00557 Metallopeptidase family M24 J6598_20485 PF13193 AMP-binding enzyme C-terminal domain J6598_20485 PF00501 AMP-binding enzyme J6598_20490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J6598_20490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J6598_20490 PF00378 Enoyl-CoA hydratase/isomerase J6598_20495 PF00108 Thiolase, N-terminal domain J6598_20495 PF02803 Thiolase, C-terminal domain J6598_20500 PF00072 Response regulator receiver domain J6598_20500 PF00486 Transcriptional regulatory protein, C terminal J6598_20505 PF00512 His Kinase A (phospho-acceptor) domain J6598_20505 PF00672 HAMP domain J6598_20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_20510 PF01547 Bacterial extracellular solute-binding protein J6598_20520 PF01206 Sulfurtransferase TusA J6598_20525 PF01042 Endoribonuclease L-PSP J6598_20530 PF00691 OmpA family J6598_20530 PF13488 Glycine zipper J6598_20535 PF03352 Methyladenine glycosylase J6598_20540 PF02091 Glycyl-tRNA synthetase alpha subunit J6598_20545 PF02092 Glycyl-tRNA synthetase beta subunit J6598_20545 PF05746 DALR anticodon binding domain J6598_20560 PF03707 Bacterial signalling protein N terminal repeat J6598_20560 PF00563 EAL domain J6598_20560 PF00990 Diguanylate cyclase, GGDEF domain J6598_20565 PF03545 Yersinia virulence determinant (YopE) J6598_20565 PF03496 ADP-ribosyltransferase exoenzyme J6598_20570 PF05932 Tir chaperone protein (CesT) family J6598_20580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6598_20580 PF00672 HAMP domain J6598_20585 PF00356 Bacterial regulatory proteins, lacI family J6598_20590 PF13458 Periplasmic binding protein J6598_20595 PF02653 Branched-chain amino acid transport system / permease component J6598_20600 PF02653 Branched-chain amino acid transport system / permease component J6598_20600 PF11862 Domain of unknown function (DUF3382) J6598_20605 PF00005 ABC transporter J6598_20605 PF12399 Branched-chain amino acid ATP-binding cassette transporter J6598_20610 PF00005 ABC transporter J6598_20615 PF00581 Rhodanese-like domain J6598_20620 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease J6598_20620 PF01694 Rhomboid family J6598_20625 PF12262 Bacterial virulence factor lipase N-terminal J6598_20630 PF04380 Membrane fusogenic activity J6598_20635 PF08447 PAS fold J6598_20635 PF08448 PAS fold J6598_20635 PF00990 Diguanylate cyclase, GGDEF domain J6598_20635 PF00563 EAL domain J6598_20640 PF00175 Oxidoreductase NAD-binding domain J6598_20645 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J6598_20655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6598_20655 PF07498 Rho termination factor, N-terminal domain J6598_20655 PF07497 Rho termination factor, RNA-binding domain J6598_20660 PF00085 Thioredoxin J6598_20665 PF00271 Helicase conserved C-terminal domain J6598_20665 PF00270 DEAD/DEAH box helicase J6598_20670 PF02541 Ppx/GppA phosphatase family J6598_20680 PF04445 Putative SAM-dependent methyltransferase J6598_20685 PF00563 EAL domain J6598_20685 PF03707 Bacterial signalling protein N terminal repeat J6598_20685 PF00990 Diguanylate cyclase, GGDEF domain J6598_20690 PF01432 Peptidase family M3 J6598_20695 PF00704 Glycosyl hydrolases family 18 J6598_20700 PF00490 Delta-aminolevulinic acid dehydratase J6598_20705 PF01026 TatD related DNase J6598_20710 PF00902 Sec-independent protein translocase protein (TatC) J6598_20715 PF02416 mttA/Hcf106 family J6598_20720 PF02416 mttA/Hcf106 family J6598_20725 PF03109 ABC1 family J6598_20730 PF02036 SCP-2 sterol transfer family J6598_20735 PF01209 ubiE/COQ5 methyltransferase family J6598_20740 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J6598_20745 PF07969 Amidohydrolase family J6598_20750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J6598_20785 PF03544 Gram-negative bacterial TonB protein C-terminal J6598_20790 PF02472 Biopolymer transport protein ExbD/TolR J6598_20795 PF01618 MotA/TolQ/ExbB proton channel family J6598_20800 PF01618 MotA/TolQ/ExbB proton channel family J6598_20810 PF03472 Autoinducer binding domain J6598_20810 PF00196 Bacterial regulatory proteins, luxR family J6598_20815 PF01380 SIS domain J6598_20820 PF00455 DeoR C terminal sensor domain J6598_20820 PF08220 DeoR-like helix-turn-helix domain J6598_20825 PF00072 Response regulator receiver domain J6598_20825 PF00486 Transcriptional regulatory protein, C terminal J6598_20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6598_20830 PF00512 His Kinase A (phospho-acceptor) domain J6598_20830 PF00672 HAMP domain J6598_20835 PF00905 Penicillin binding protein transpeptidase domain J6598_20840 PF06123 Inner membrane protein CreD J6598_20845 PF00132 Bacterial transferase hexapeptide (six repeats) J6598_20845 PF14602 Hexapeptide repeat of succinyl-transferase J6598_20845 PF12804 MobA-like NTP transferase domain J6598_20850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J6598_20850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J6598_20855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6598_20855 PF02874 ATP synthase alpha/beta family, beta-barrel domain J6598_20860 PF00231 ATP synthase J6598_20865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6598_20865 PF00306 ATP synthase alpha/beta chain, C terminal domain J6598_20865 PF02874 ATP synthase alpha/beta family, beta-barrel domain J6598_20870 PF00213 ATP synthase delta (OSCP) subunit J6598_20875 PF00430 ATP synthase B/B' CF(0) J6598_20880 PF00137 ATP synthase subunit C J6598_20885 PF00119 ATP synthase A chain J6598_20895 PF17762 HTH domain found in ParB protein J6598_20895 PF02195 ParB-like nuclease domain J6598_20900 PF13614 AAA domain J6598_20905 PF02527 rRNA small subunit methyltransferase G J6598_20910 PF01134 Glucose inhibited division protein A J6598_20910 PF13932 GidA associated domain J6598_20915 PF00258 Flavodoxin J6598_20920 PF07715 TonB-dependent Receptor Plug Domain J6598_20920 PF00593 TonB dependent receptor J6598_20925 PF00005 ABC transporter J6598_20930 PF00005 ABC transporter J6598_20935 PF01497 Periplasmic binding protein J6598_20940 PF01032 FecCD transport family J6598_20945 PF13657 HipA N-terminal domain J6598_20945 PF07804 HipA-like C-terminal domain J6598_20965 PF02796 Helix-turn-helix domain of resolvase J6598_20965 PF00239 Resolvase, N terminal domain J6598_20970 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ J6598_20975 PF13495 Phage integrase, N-terminal SAM-like domain J6598_20975 PF00589 Phage integrase family J6598_20980 PF07690 Major Facilitator Superfamily J6598_20985 PF00905 Penicillin binding protein transpeptidase domain J6598_20990 PF01909 Nucleotidyltransferase domain J6598_20990 PF13427 Domain of unknown function (DUF4111) J6598_20995 PF00893 Small Multidrug Resistance protein J6598_21010 PF00186 Dihydrofolate reductase J6598_21015 PF00893 Small Multidrug Resistance protein J6598_21020 PF00809 Pterin binding enzyme J6598_21045 PF02909 Tetracyclin repressor-like, C-terminal domain J6598_21045 PF00440 Bacterial regulatory proteins, tetR family J6598_21050 PF07690 Major Facilitator Superfamily J6598_21075 PF04851 Type III restriction enzyme, res subunit J6598_21075 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) J6598_21075 PF00271 Helicase conserved C-terminal domain J6598_21075 PF08463 EcoEI R protein C-terminal J6598_21080 PF12161 HsdM N-terminal domain J6598_21080 PF02384 N-6 DNA Methylase J6598_21085 PF01420 Type I restriction modification DNA specificity domain J6598_21095 PF07510 Protein of unknown function (DUF1524) J6598_21115 PF02899 Phage integrase, N-terminal SAM-like domain J6598_21115 PF00589 Phage integrase family J6598_21120 PF10396 GTP-binding protein TrmE N-terminus J6598_21120 PF12631 MnmE helical domain J6598_21120 PF01926 50S ribosome-binding GTPase J6598_21125 PF02096 60Kd inner membrane protein J6598_21125 PF14849 YidC periplasmic domain J6598_21130 PF01809 Putative membrane protein insertion efficiency factor J6598_21135 PF00825 Ribonuclease P J6598_21140 PF00468 Ribosomal protein L34 J6598_21145 PF00005 ABC transporter J6598_21150 PF00528 Binding-protein-dependent transport system inner membrane component J6598_21155 PF00497 Bacterial extracellular solute-binding proteins, family 3