locus-tag	class	description
FOB40_00015	COG1309	transcriptional regulator
FOB40_00020	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOB40_00025	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOB40_00035	COG1091	dTDP-4-dehydrorhamnose reductase activity
FOB40_00070	COG0463	Glycosyl transferase, family 2
FOB40_00090	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOB40_00100	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOB40_00120	COG1216	Glycosyl transferase, family 2
FOB40_00135	COG0438	transferase activity, transferring glycosyl groups
FOB40_00140	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FOB40_00145	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOB40_00155	COG0662	Cupin 2, conserved barrel domain protein
FOB40_00155	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
FOB40_00175	COG1596	polysaccharide export
FOB40_00180	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOB40_00185	COG0489	protein tyrosine kinase activity
FOB40_00185	COG3206	protein involved in exopolysaccharide biosynthesis
FOB40_00205	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOB40_00220	COG1538	Outer membrane efflux protein
FOB40_00225	COG0577	efflux transmembrane transporter activity
FOB40_00225	COG1136	(ABC) transporter
FOB40_00230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOB40_00235	COG1227	inorganic diphosphatase activity
FOB40_00240	COG0497	DNA recombination
FOB40_00245	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FOB40_00250	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOB40_00255	COG0443	Heat shock 70 kDa protein
FOB40_00260	COG0484	heat shock protein binding
FOB40_00290	COG1285	pathogenesis
FOB40_00300	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOB40_00320	COG2391	methyltransferase activity
FOB40_00330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOB40_00335	COG1566	PFAM secretion protein HlyD family protein
FOB40_00340	COG1136	(ABC) transporter
FOB40_00340	COG0577	efflux transmembrane transporter activity
FOB40_00345	COG1136	(ABC) transporter
FOB40_00345	COG0577	efflux transmembrane transporter activity
FOB40_00350	COG1136	(ABC) transporter
FOB40_00350	COG0577	efflux transmembrane transporter activity
FOB40_00360	COG0095	Lipoate-protein ligase
FOB40_00370	COG0702	epimerase
FOB40_00375	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOB40_00405	COG4964	Belongs to the GSP D family
FOB40_00415	COG2894	cell division
FOB40_00455	COG1454	alcohol dehydrogenase
FOB40_00465	COG0564	pseudouridine synthase activity
FOB40_00495	COG1280	lysine exporter protein (LysE YggA)
FOB40_00510	COG3263	regulation of cellular component size
FOB40_00520	COG1876	peptidase activity
FOB40_00525	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOB40_00530	COG1393	Belongs to the ArsC family
FOB40_00540	COG3069	C4-dicarboxylate transmembrane transporter activity
FOB40_00545	COG1473	amidohydrolase
FOB40_00555	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOB40_00565	COG0017	Asparaginyl-tRNA synthetase
FOB40_00580	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOB40_00585	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FOB40_00590	COG0156	8-amino-7-oxononanoate synthase activity
FOB40_00595	COG1073	alpha beta
FOB40_00595	COG2226	methyltransferase
FOB40_00600	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FOB40_00605	COG0501	Belongs to the peptidase M48B family
FOB40_00615	COG0633	Ferredoxin
FOB40_00615	COG0633	Ferredoxin
FOB40_00615	COG3217	Mosc domain protein beta barrel domain protein
FOB40_00615	COG3217	Mosc domain protein beta barrel domain protein
FOB40_00630	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOB40_00630	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOB40_00630	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOB40_00630	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FOB40_00640	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOB40_00645	COG1607	acyl-coa hydrolase
FOB40_00655	COG3021	interspecies interaction between organisms
FOB40_00660	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOB40_00665	COG2027	D-alanyl-D-alanine carboxypeptidase
FOB40_00670	COG1061	Type III restriction enzyme res subunit
FOB40_00675	COG1566	PFAM secretion protein HlyD family protein
FOB40_00685	COG1966	Carbon starvation protein
FOB40_00690	COG3279	Response regulator of the LytR AlgR family
FOB40_00695	COG3275	phosphorelay sensor kinase activity
FOB40_00700	COG2199	diguanylate cyclase activity
FOB40_00700	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FOB40_00710	COG1940	carbohydrate kinase activity
FOB40_00710	COG1846	Transcriptional regulator
FOB40_00715	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOB40_00720	COG0363	glucosamine-6-phosphate deaminase activity
FOB40_00725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOB40_00725	COG2190	(PTS) system
FOB40_00725	COG1263	PTS System
FOB40_00735	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOB40_00740	COG0735	belongs to the Fur family
FOB40_00750	COG0716	FMN binding
FOB40_00765	COG0596	Alpha beta hydrolase
FOB40_00770	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FOB40_00775	COG0033	Phosphoglucomutase
FOB40_00790	COG2951	lytic endotransglycosylase activity
FOB40_00795	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOB40_00800	COG4136	ATPase activity
FOB40_00810	COG4134	Bacterial extracellular solute-binding protein
FOB40_00820	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOB40_00830	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOB40_00840	COG0729	surface antigen
FOB40_00845	COG2911	Protein conserved in bacteria
FOB40_00865	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOB40_00875	COG0741	lytic transglycosylase activity
FOB40_00885	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOB40_00890	COG4771	TonB-dependent receptor
FOB40_00895	COG1169	isochorismate synthase
FOB40_00900	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOB40_00905	COG1535	isochorismatase
FOB40_00905	COG3433	isochorismatase activity
FOB40_00910	COG1028	Short-chain dehydrogenase reductase Sdr
FOB40_00915	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FOB40_00915	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOB40_00940	COG1278	Cold shock
FOB40_00965	COG4166	transmembrane transport
FOB40_00970	COG1349	DNA-binding transcription factor activity
FOB40_00980	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOB40_00985	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOB40_00995	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FOB40_01000	COG1187	pseudouridine synthase activity
FOB40_01010	COG4166	transmembrane transport
FOB40_01015	COG0622	Phosphoesterase
FOB40_01030	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FOB40_01035	COG0835	chemotaxis
FOB40_01035	COG0784	Response regulator, receiver
FOB40_01040	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOB40_01045	COG1815	bacterial-type flagellum-dependent cell motility
FOB40_01050	COG1558	bacterial-type flagellum-dependent cell motility
FOB40_01065	COG4787	bacterial-type flagellum-dependent cell motility
FOB40_01070	COG4786	Flagellar basal body rod
FOB40_01075	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FOB40_01080	COG1706	bacterial-type flagellum-dependent cell motility
FOB40_01085	COG1705	Flagellar rod assembly protein muramidase FlgJ
FOB40_01085	COG3951	Flagellar rod assembly protein muramidase FlgJ
FOB40_01095	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOB40_01100	COG2239	Acts as a magnesium transporter
FOB40_01105	COG0248	Ppx GppA phosphatase
FOB40_01110	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FOB40_01115	COG2716	regulation of RNA biosynthetic process
FOB40_01125	COG2204	response regulator
FOB40_01130	COG3852	Histidine kinase
FOB40_01135	COG2204	response regulator
FOB40_01140	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOB40_01145	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOB40_01150	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FOB40_01155	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FOB40_01175	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FOB40_01185	COG0590	tRNA wobble adenosine to inosine editing
FOB40_01190	COG0573	inorganic phosphate transmembrane transporter activity
FOB40_01195	COG0581	inorganic phosphate transmembrane transporter activity
FOB40_01205	COG0704	Plays a role in the regulation of phosphate uptake
FOB40_01210	COG1253	flavin adenine dinucleotide binding
FOB40_01225	COG0531	amino acid
FOB40_01240	COG1126	abc transporter atp-binding protein
FOB40_01245	COG0765	amino acid transport
FOB40_01250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOB40_01255	COG3706	GGDEF domain
FOB40_01260	COG2271	Major facilitator Superfamily
FOB40_01270	COG2197	response regulator
FOB40_01275	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOB40_01295	COG1785	Belongs to the alkaline phosphatase family
FOB40_01300	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FOB40_01305	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOB40_01315	COG1199	ATP-dependent helicase activity
FOB40_01325	COG2801	Transposase and inactivated derivatives
FOB40_01365	COG0346	lactoylglutathione lyase activity
FOB40_01370	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOB40_01380	COG4659	FMN binding
FOB40_01385	COG4658	electron transport chain
FOB40_01395	COG2878	Part of a membrane complex involved in electron transport
FOB40_01400	COG4657	Part of a membrane complex involved in electron transport
FOB40_01420	COG0346	lactoylglutathione lyase activity
FOB40_01430	COG1187	pseudouridine synthase activity
FOB40_01435	COG2807	transmembrane transport
FOB40_01445	COG0583	DNA-binding transcription factor activity
FOB40_01455	COG1607	acyl-coa hydrolase
FOB40_01460	COG2979	Protein of unknown function (DUF533)
FOB40_01470	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOB40_01480	COG1294	oxidase, subunit
FOB40_01515	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOB40_01520	COG2814	Major facilitator Superfamily
FOB40_01530	COG0656	L-ascorbic acid biosynthetic process
FOB40_01555	COG0583	DNA-binding transcription factor activity
FOB40_01565	COG0840	transmembrane signaling receptor activity
FOB40_01570	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FOB40_01575	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOB40_01580	COG2271	Major facilitator Superfamily
FOB40_01585	COG1349	DNA-binding transcription factor activity
FOB40_01595	COG0584	glycerophosphoryl diester phosphodiesterase
FOB40_01600	COG4574	serine-type endopeptidase inhibitor activity
FOB40_01605	COG3085	chromosome segregation
FOB40_01610	COG0583	DNA-binding transcription factor activity
FOB40_01620	COG1448	Aminotransferase
FOB40_01635	COG0658	competence protein
FOB40_01635	COG2333	competence protein COMEC
FOB40_01645	COG1663	tetraacyldisaccharide 4'-kinase activity
FOB40_01650	COG2835	tetraacyldisaccharide 4'-kinase activity
FOB40_01655	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FOB40_01660	COG2197	response regulator
FOB40_01665	COG0322	excinuclease ABC activity
FOB40_01840	COG4695	Portal protein
FOB40_01845	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOB40_01850	COG2194	sulfuric ester hydrolase activity
FOB40_01955	COG4974	Belongs to the 'phage' integrase family
FOB40_01965	COG0367	asparagine synthase
FOB40_01975	COG4651	solute:proton antiporter activity
FOB40_01975	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOB40_01980	COG0647	UMP catabolic process
FOB40_01985	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FOB40_01995	COG1902	pentaerythritol trinitrate reductase activity
FOB40_02000	COG1253	flavin adenine dinucleotide binding
FOB40_02010	COG0277	FAD linked oxidase domain protein
FOB40_02010	COG0247	lactate metabolic process
FOB40_02020	COG2050	protein possibly involved in aromatic compounds catabolism
FOB40_02035	COG5001	Diguanylate cyclase
FOB40_02035	COG3300	MHYT domain
FOB40_02040	COG2056	Na+-H+ antiporter family
FOB40_02045	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOB40_02050	COG0671	phosphoesterase, PA-phosphatase related
FOB40_02055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOB40_02060	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOB40_02070	COG0101	tRNA pseudouridine synthase activity
FOB40_02075	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FOB40_02080	COG0285	dihydrofolate synthase activity
FOB40_02085	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FOB40_02090	COG0393	Putative heavy-metal-binding
FOB40_02100	COG1648	precorrin-2 dehydrogenase activity
FOB40_02100	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOB40_02105	COG2221	Nitrite and sulphite reductase 4Fe-4S
FOB40_02120	COG4667	esterase of the alpha-beta hydrolase superfamily
FOB40_02125	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOB40_02130	COG1368	sulfuric ester hydrolase activity
FOB40_02140	COG0527	aspartate kinase activity
FOB40_02145	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOB40_02145	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FOB40_02150	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOB40_02170	COG0596	Alpha beta hydrolase
FOB40_02195	COG1136	(ABC) transporter
FOB40_02210	COG2814	Major facilitator Superfamily
FOB40_02230	COG0672	)-iron permease
FOB40_02325	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOB40_02340	COG0659	secondary active sulfate transmembrane transporter activity
FOB40_02355	COG0392	lysyltransferase activity
FOB40_02355	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FOB40_02365	COG2205	protein histidine kinase activity
FOB40_02370	COG0745	RESPONSE REGULATOR receiver
FOB40_02390	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FOB40_02395	COG1278	Cold shock
FOB40_02400	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FOB40_02405	COG0542	response to heat
FOB40_02410	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOB40_02415	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FOB40_02420	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FOB40_02425	COG3134	Outer membrane lipoprotein
FOB40_02430	COG3706	GGDEF domain
FOB40_02435	COG0492	ferredoxin-NADP+ reductase activity
FOB40_02440	COG0686	Belongs to the AlaDH PNT family
FOB40_02450	COG0531	amino acid
FOB40_02450	COG1674	ftsk spoiiie
FOB40_02455	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOB40_02460	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOB40_02465	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FOB40_02470	COG1286	toxin biosynthetic process
FOB40_02475	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FOB40_02485	COG0563	adenylate kinase activity
FOB40_02490	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FOB40_02500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOB40_02515	COG5001	Diguanylate cyclase
FOB40_02515	COG3300	MHYT domain
FOB40_02545	COG0598	Magnesium transport protein CorA
FOB40_02565	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FOB40_02570	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FOB40_02575	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOB40_02590	COG0513	Belongs to the DEAD box helicase family
FOB40_02595	COG0386	Belongs to the glutathione peroxidase family
FOB40_02605	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOB40_02610	COG0383	alpha-mannosidase activity
FOB40_02615	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOB40_02615	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOB40_02615	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_02620	COG2188	Transcriptional regulator
FOB40_02625	COG1570	exodeoxyribonuclease VII activity
FOB40_02630	COG3038	cytochrome b561
FOB40_02635	COG0517	IMP dehydrogenase activity
FOB40_02635	COG0516	GMP reductase activity
FOB40_02640	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOB40_02640	COG0519	Catalyzes the synthesis of GMP from XMP
FOB40_02675	COG1025	Belongs to the peptidase M16 family
FOB40_02680	COG2062	phosphohistidine phosphatase, SixA
FOB40_02690	COG0697	spore germination
FOB40_02695	COG4166	transmembrane transport
FOB40_02700	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FOB40_02705	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOB40_02715	COG4591	ABC-type transport system involved in lipoprotein release permease component
FOB40_02720	COG1136	(ABC) transporter
FOB40_02725	COG4591	ABC-type transport system involved in lipoprotein release permease component
FOB40_02730	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FOB40_02745	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOB40_02750	COG0740	serine-type endopeptidase activity
FOB40_02755	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FOB40_02760	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FOB40_02765	COG0776	regulation of translation
FOB40_02770	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOB40_02775	COG0488	(ABC) transporter
FOB40_02780	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOB40_02785	COG3162	membrane
FOB40_02800	COG1024	Enoyl-CoA hydratase
FOB40_02805	COG1115	amino acid carrier protein
FOB40_02810	COG0456	acetyltransferase
FOB40_02830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOB40_02840	COG3842	ATPase activity
FOB40_02845	COG1840	ABC-type Fe3 transport system, periplasmic component
FOB40_02855	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOB40_02865	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOB40_02880	COG3088	subunit of a heme lyase
FOB40_02880	COG4235	cytochrome complex assembly
FOB40_02890	COG1138	Cytochrome C-type biogenesis protein
FOB40_02895	COG3301	Polysulphide reductase, NrfD
FOB40_02900	COG0437	4 iron, 4 sulfur cluster binding
FOB40_02905	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FOB40_02920	COG0247	lactate metabolic process
FOB40_02925	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
FOB40_02930	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOB40_02935	COG3012	SEC-C Motif Domain Protein
FOB40_02940	COG0840	transmembrane signaling receptor activity
FOB40_02945	COG1846	Transcriptional regulator
FOB40_02945	COG1940	carbohydrate kinase activity
FOB40_02955	COG0730	response to heat
FOB40_02960	COG0583	DNA-binding transcription factor activity
FOB40_02975	COG3593	DNA synthesis involved in DNA repair
FOB40_03025	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOB40_03030	COG1011	Hydrolase
FOB40_03045	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOB40_03050	COG2832	Protein of unknown function (DUF454)
FOB40_03055	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOB40_03065	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FOB40_03075	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FOB40_03090	COG1560	Kdo2-lipid A biosynthetic process
FOB40_03095	COG1560	Kdo2-lipid A biosynthetic process
FOB40_03120	COG0417	DNA replication proofreading
FOB40_03135	COG1451	nucleotide metabolic process
FOB40_03150	COG3069	C4-dicarboxylate transmembrane transporter activity
FOB40_03165	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FOB40_03165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOB40_03170	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOB40_03175	COG2985	domain, Protein
FOB40_03175	COG0569	domain protein
FOB40_03190	COG0556	nucleotide-excision repair
FOB40_03200	COG0586	Pfam SNARE associated Golgi protein
FOB40_03205	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOB40_03210	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FOB40_03225	COG4681	YaeQ
FOB40_03270	COG0534	Mate efflux family protein
FOB40_03285	COG0307	riboflavin synthase, alpha
FOB40_03295	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOB40_03300	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FOB40_03305	COG0697	spore germination
FOB40_03310	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOB40_03350	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOB40_03360	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FOB40_03365	COG2894	cell division
FOB40_03370	COG0850	regulation of cytokinetic process
FOB40_03375	COG3100	YcgL domain-containing protein
FOB40_03380	COG1760	l-serine dehydratase
FOB40_03390	COG1760	l-serine dehydratase
FOB40_03395	COG3123	guanosine phosphorylase activity
FOB40_03405	COG0205	6-phosphofructokinase activity
FOB40_03415	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOB40_03420	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOB40_03430	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FOB40_03435	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FOB40_03445	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FOB40_03455	COG0242	peptide deformylase activity
FOB40_03490	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOB40_03495	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOB40_03500	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOB40_03510	COG0549	Belongs to the carbamate kinase family
FOB40_03525	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOB40_03535	COG0697	spore germination
FOB40_03540	COG3608	succinylglutamate desuccinylase aspartoacylase
FOB40_03540	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FOB40_03545	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOB40_03550	COG2068	MobA-Related Protein
FOB40_03555	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOB40_03555	COG0493	'glutamate synthase
FOB40_03560	COG0402	S-adenosylhomocysteine deaminase activity
FOB40_03565	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FOB40_03570	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FOB40_03570	COG2080	2 iron, 2 sulfur cluster binding
FOB40_03575	COG2233	PERMEase
FOB40_03580	COG0402	S-adenosylhomocysteine deaminase activity
FOB40_03585	COG2252	PERMEase
FOB40_03590	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FOB40_03595	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FOB40_03600	COG2080	2 iron, 2 sulfur cluster binding
FOB40_03605	COG3134	Outer membrane lipoprotein
FOB40_03615	COG1288	antiporter activity
FOB40_03620	COG0318	PFAM AMP-dependent synthetase and ligase
FOB40_03625	COG3706	GGDEF domain
FOB40_03640	COG0107	imidazoleglycerol-phosphate synthase activity
FOB40_03645	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FOB40_03650	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FOB40_03655	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOB40_03655	COG0131	Imidazoleglycerol-phosphate dehydratase
FOB40_03660	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOB40_03665	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOB40_03670	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FOB40_03680	COG1199	ATP-dependent helicase activity
FOB40_03685	COG1214	PFAM Peptidase M22, glycoprotease
FOB40_03695	COG2267	carboxylic ester hydrolase activity
FOB40_03700	COG0318	PFAM AMP-dependent synthetase and ligase
FOB40_03710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOB40_03715	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
FOB40_03720	COG0709	Synthesizes selenophosphate from selenide and ATP
FOB40_03735	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOB40_03740	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOB40_03745	COG0840	transmembrane signaling receptor activity
FOB40_03750	COG1254	Belongs to the acylphosphatase family
FOB40_03760	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOB40_03760	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOB40_03765	COG0489	protein tyrosine kinase activity
FOB40_03770	COG0572	uridine kinase
FOB40_03775	COG0717	Belongs to the dCTP deaminase family
FOB40_03780	COG0306	phosphate transporter
FOB40_03785	COG2140	Oxalate decarboxylase
FOB40_03790	COG1609	Transcriptional regulator
FOB40_03805	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOB40_03805	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_03810	COG3715	PTS system
FOB40_03815	COG3716	PTS system mannose fructose sorbose family IID component
FOB40_03820	COG2942	2-epimerase
FOB40_03825	COG3313	Fe-S protein
FOB40_03830	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FOB40_03835	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOB40_03840	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOB40_03845	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOB40_03855	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOB40_03865	COG0366	Alpha amylase catalytic
FOB40_03880	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOB40_03885	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FOB40_03890	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FOB40_03895	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FOB40_03900	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FOB40_03905	COG0072	phenylalanine-tRNA ligase activity
FOB40_03905	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOB40_03910	COG0776	regulation of translation
FOB40_03915	COG0784	Response regulator, receiver
FOB40_03915	COG2205	protein histidine kinase activity
FOB40_03930	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOB40_03940	COG2199	diguanylate cyclase activity
FOB40_03945	COG1609	Transcriptional regulator
FOB40_03950	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOB40_03955	COG1879	ABC-type sugar transport system periplasmic component
FOB40_03960	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOB40_03965	COG1129	ABC transporter
FOB40_03970	COG1869	D-ribose catabolic process
FOB40_03975	COG0625	glutathione transferase activity
FOB40_03985	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOB40_03990	COG1177	transmembrane transport
FOB40_03995	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOB40_04015	COG0037	tRNA processing
FOB40_04020	COG0589	response to stress
FOB40_04025	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOB40_04040	COG2217	Heavy metal translocating P-type atpase
FOB40_04050	COG2010	Cytochrome c
FOB40_04065	COG3278	Belongs to the heme-copper respiratory oxidase family
FOB40_04075	COG1956	GAF domain-containing protein
FOB40_04080	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
FOB40_04090	COG0308	aminopeptidase N
FOB40_04100	COG2902	Dehydrogenase
FOB40_04105	COG0167	dihydroorotate dehydrogenase activity
FOB40_04120	COG0254	rRNA binding
FOB40_04125	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOB40_04130	COG0116	Belongs to the methyltransferase superfamily
FOB40_04130	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOB40_04150	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOB40_04155	COG1067	ATP-dependent peptidase activity
FOB40_04180	COG3141	response to X-ray
FOB40_04185	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FOB40_04190	COG4221	oxidoreductase activity
FOB40_04235	COG0372	Belongs to the citrate synthase family
FOB40_04240	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FOB40_04250	COG2995	paraquat-inducible protein a
FOB40_04255	COG3008	intermembrane lipid transfer
FOB40_04260	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FOB40_04260	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOB40_04275	COG0084	hydrolase, TatD family'
FOB40_04280	COG0470	DNA polymerase III
FOB40_04285	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOB40_04290	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOB40_04295	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOB40_04300	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOB40_04305	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOB40_04310	COG1028	Short-chain dehydrogenase reductase Sdr
FOB40_04320	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOB40_04325	COG0416	fatty acid biosynthetic process
FOB40_04330	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOB40_04335	COG1399	metal-binding, possibly nucleic acid-binding protein
FOB40_04340	COG0424	maF-like protein
FOB40_04355	COG1530	ribonuclease E activity
FOB40_04360	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FOB40_04360	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOB40_04360	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOB40_04365	COG1105	Belongs to the carbohydrate kinase PfkB family
FOB40_04370	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_04370	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_04375	COG1609	Transcriptional regulator
FOB40_04380	COG0814	amino acid
FOB40_04390	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FOB40_04400	COG0513	Belongs to the DEAD box helicase family
FOB40_04410	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FOB40_04415	COG2890	protein-(glutamine-N5) methyltransferase activity
FOB40_04420	COG2840	Smr protein MutS2
FOB40_04425	COG3706	GGDEF domain
FOB40_04430	COG0406	alpha-ribazole phosphatase activity
FOB40_04445	COG2824	Alkylphosphonate utilization operon protein PhnA
FOB40_04460	COG0494	nUDIX hydrolase
FOB40_04465	COG0814	amino acid
FOB40_04475	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FOB40_04480	COG0514	ATP-dependent DNA helicase (RecQ)
FOB40_04485	COG2766	serine protein kinase
FOB40_04490	COG2718	Belongs to the UPF0229 family
FOB40_04495	COG2719	SpoVR family
FOB40_04500	COG1024	Enoyl-CoA hydratase
FOB40_04500	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOB40_04505	COG0183	Belongs to the thiolase family
FOB40_04510	COG0714	Associated with various cellular activities
FOB40_04530	COG2304	oxidoreductase activity
FOB40_04540	COG1595	DNA-templated transcription, initiation
FOB40_04550	COG2067	long-chain fatty acid transport protein
FOB40_04555	COG2067	long-chain fatty acid transport protein
FOB40_04560	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FOB40_04575	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FOB40_04585	COG1643	Atp-dependent helicase
FOB40_04595	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FOB40_04600	COG3119	arylsulfatase activity
FOB40_04605	COG0714	Associated with various cellular activities
FOB40_04620	COG2304	oxidoreductase activity
FOB40_04625	COG2304	oxidoreductase activity
FOB40_04650	COG0641	radical SAM
FOB40_04695	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FOB40_04700	COG3457	Alanine racemase
FOB40_04715	COG1735	metal-dependent hydrolase with the TIM-barrel fold
FOB40_04725	COG2188	Transcriptional regulator
FOB40_04735	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOB40_04780	COG2925	Exonuclease
FOB40_04790	COG3345	alpha-galactosidase
FOB40_04795	COG1380	Effector of murein hydrolase LrgA
FOB40_04800	COG1346	cytolysis
FOB40_04805	COG0295	cytidine deaminase activity
FOB40_04810	COG3033	Beta-eliminating lyase
FOB40_04820	COG3046	protein related to deoxyribodipyrimidine photolyase
FOB40_04825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOB40_04830	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOB40_04855	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOB40_04865	COG3158	transport of potassium into the cell
FOB40_04870	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOB40_04875	COG0651	ATP synthesis coupled electron transport
FOB40_04880	COG0650	Formate hydrogenlyase subunit 4
FOB40_04885	COG3261	NADH dehydrogenase
FOB40_04885	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FOB40_04890	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOB40_04895	COG3260	NADH ubiquinone oxidoreductase 20
FOB40_04905	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FOB40_04915	COG1921	L-seryl-tRNASec selenium transferase activity
FOB40_04925	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FOB40_04930	COG0298	carbon dioxide binding
FOB40_04940	COG0309	Hydrogenase expression formation protein (HypE)
FOB40_04945	COG0375	protein maturation
FOB40_04950	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FOB40_04965	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOB40_04970	COG0601	transmembrane transport
FOB40_04980	COG1773	rubredoxin
FOB40_04985	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FOB40_04990	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FOB40_04995	COG5557	Pfam Polysulphide reductase, NrfD
FOB40_05000	COG0437	4 iron, 4 sulfur cluster binding
FOB40_05005	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FOB40_05010	COG5001	Diguanylate cyclase
FOB40_05010	COG3706	GGDEF domain
FOB40_05010	COG2203	Gaf domain
FOB40_05010	COG4251	negative regulation of phosphorylation
FOB40_05015	COG0438	transferase activity, transferring glycosyl groups
FOB40_05020	COG0438	transferase activity, transferring glycosyl groups
FOB40_05040	COG0438	transferase activity, transferring glycosyl groups
FOB40_05090	COG0438	transferase activity, transferring glycosyl groups
FOB40_05095	COG1215	transferase activity, transferring glycosyl groups
FOB40_05100	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOB40_05140	COG2205	protein histidine kinase activity
FOB40_05140	COG0784	Response regulator, receiver
FOB40_05175	COG0730	response to heat
FOB40_05185	COG1028	Short-chain dehydrogenase reductase Sdr
FOB40_05195	COG1024	Enoyl-CoA hydratase
FOB40_05200	COG1024	Enoyl-CoA hydratase
FOB40_05205	COG1960	acyl-CoA dehydrogenase activity
FOB40_05210	COG1960	acyl-CoA dehydrogenase activity
FOB40_05215	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOB40_05220	COG1024	Enoyl-CoA hydratase
FOB40_05250	COG1584	GPR1 FUN34 yaaH family protein
FOB40_05265	COG0045	succinate-CoA ligase (ADP-forming) activity
FOB40_05270	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOB40_05275	COG0567	Dehydrogenase, E1 component
FOB40_05285	COG1053	succinate dehydrogenase
FOB40_05290	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FOB40_05295	COG2009	succinate dehydrogenase
FOB40_05335	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FOB40_05350	COG2501	S4 domain
FOB40_05360	COG1132	(ABC) transporter
FOB40_05365	COG1132	(ABC) transporter
FOB40_05375	COG3118	belongs to the thioredoxin family
FOB40_05380	COG0471	metal ion transport
FOB40_05385	COG0058	SHG alpha-glucan phosphorylase activity
FOB40_05410	COG1882	Formate acetyltransferase
FOB40_05415	COG2116	formate transmembrane transporter activity
FOB40_05420	COG1944	ATP diphosphatase activity
FOB40_05425	COG2723	6-phospho-beta-galactosidase activity
FOB40_05430	COG0583	DNA-binding transcription factor activity
FOB40_05440	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FOB40_05445	COG0583	DNA-binding transcription factor activity
FOB40_05455	COG1335	isochorismatase
FOB40_05465	COG2271	Major facilitator Superfamily
FOB40_05470	COG0583	DNA-binding transcription factor activity
FOB40_05475	COG0583	DNA-binding transcription factor activity
FOB40_05480	COG2910	NAD(P)H-binding
FOB40_05510	COG0861	Integral membrane protein TerC family
FOB40_05515	COG2885	chlorophyll binding
FOB40_05520	COG2199	diguanylate cyclase activity
FOB40_05535	COG2154	pterin-4-alpha-carbinolamine dehydratase
FOB40_05545	COG1012	belongs to the aldehyde dehydrogenase family
FOB40_05550	COG1177	transmembrane transport
FOB40_05555	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOB40_05560	COG3842	ATPase activity
FOB40_05565	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOB40_05570	COG0583	DNA-binding transcription factor activity
FOB40_05575	COG3768	UPF0283 membrane protein
FOB40_05580	COG3106	COG3106 Predicted ATPase
FOB40_05595	COG1842	Phage shock protein A
FOB40_05600	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOB40_05605	COG0747	negative chemotaxis
FOB40_05610	COG4168	peptide transport system, permease
FOB40_05615	COG4171	peptide transport system, permease
FOB40_05620	COG4172	Belongs to the ABC transporter superfamily
FOB40_05625	COG4172	Belongs to the ABC transporter superfamily
FOB40_05630	COG0326	Molecular chaperone. Has ATPase activity
FOB40_05635	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FOB40_05655	COG1435	thymidine kinase activity
FOB40_05660	COG1757	Na H antiporter
FOB40_05665	COG2916	Histone family protein nucleoid-structuring protein H-NS
FOB40_05670	COG2096	Adenosyltransferase
FOB40_05675	COG3530	Putative quorum-sensing-regulated virulence factor
FOB40_05680	COG0602	queuosine metabolic process
FOB40_05685	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FOB40_05705	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FOB40_05715	COG0776	regulation of translation
FOB40_05720	COG0539	negative regulation of cytoplasmic translation
FOB40_05725	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FOB40_05730	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FOB40_05745	COG2814	Major facilitator Superfamily
FOB40_05765	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FOB40_05770	COG3300	MHYT domain
FOB40_05770	COG5001	Diguanylate cyclase
FOB40_05775	COG0583	DNA-binding transcription factor activity
FOB40_05780	COG3437	response regulator, receiver
FOB40_05805	COG4989	oxidoreductase activity
FOB40_05810	COG0724	RNA recognition motif
FOB40_05820	COG1126	abc transporter atp-binding protein
FOB40_05825	COG0765	amino acid transport
FOB40_05835	COG4597	amino acid ABC transporter
FOB40_05840	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
FOB40_05850	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FOB40_05865	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOB40_05870	COG1360	Flagellar Motor Protein
FOB40_05875	COG4771	TonB-dependent receptor
FOB40_05880	COG1770	oligopeptidase
FOB40_05900	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOB40_05905	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOB40_05910	COG0649	NAD binding
FOB40_05910	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOB40_05925	COG1034	ATP synthesis coupled electron transport
FOB40_05930	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FOB40_05935	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOB40_05940	COG0839	Belongs to the complex I subunit 6 family
FOB40_05945	COG0713	ATP synthesis coupled electron transport
FOB40_05955	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOB40_05960	COG1007	ATP synthesis coupled electron transport
FOB40_05975	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FOB40_05975	COG2199	diguanylate cyclase activity
FOB40_05980	COG0047	phosphoribosylformylglycinamidine synthase activity
FOB40_05980	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOB40_05985	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FOB40_05995	COG1645	bacterial-type flagellum-dependent swarming motility
FOB40_06000	COG1160	GTP binding
FOB40_06005	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOB40_06010	COG2976	Protein conserved in bacteria
FOB40_06015	COG0124	histidyl-tRNA synthetase
FOB40_06025	COG1426	Protein conserved in bacteria
FOB40_06035	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOB40_06040	COG0105	UTP biosynthetic process
FOB40_06055	COG0633	Ferredoxin
FOB40_06060	COG0443	Heat shock 70 kDa protein
FOB40_06065	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOB40_06075	COG0822	iron-sulfur transferase activity
FOB40_06080	COG1104	cysteine desulfurase activity
FOB40_06125	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOB40_06130	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOB40_06135	COG1862	Preprotein translocase
FOB40_06140	COG0343	queuine tRNA-ribosyltransferase activity
FOB40_06145	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FOB40_06150	COG0517	IMP dehydrogenase activity
FOB40_06155	COG0450	alkyl hydroperoxide reductase
FOB40_06160	COG3634	alkyl hydroperoxide reductase activity
FOB40_06225	COG1242	4 iron, 4 sulfur cluster binding
FOB40_06235	COG0070	glutamate synthase
FOB40_06235	COG0067	glutamate synthase
FOB40_06235	COG0069	glutamate synthase activity
FOB40_06240	COG0493	'glutamate synthase
FOB40_06250	COG0513	Belongs to the DEAD box helicase family
FOB40_06275	COG0023	Translation Initiation Factor
FOB40_06280	COG2119	membrane
FOB40_06325	COG0215	cysteine-tRNA ligase activity
FOB40_06330	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOB40_06340	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOB40_06355	COG2261	transglycosylase associated protein
FOB40_06360	COG0642	Histidine kinase
FOB40_06385	COG0625	glutathione transferase activity
FOB40_06395	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FOB40_06410	COG0564	pseudouridine synthase activity
FOB40_06415	COG4160	amino acid transport
FOB40_06420	COG4215	(ABC) transporter
FOB40_06425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOB40_06435	COG2431	L-lysine efflux transmembrane transporter activity
FOB40_06440	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOB40_06445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOB40_06455	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
FOB40_06465	COG1393	Belongs to the ArsC family
FOB40_06475	COG4783	chaperone-mediated protein folding
FOB40_06505	COG3842	ATPase activity
FOB40_06515	COG1175	transmembrane transport
FOB40_06525	COG3081	Nucleoid-associated protein
FOB40_06530	COG3082	Protein of unknown function (DUF1414)
FOB40_06535	COG3083	sulfuric ester hydrolase activity
FOB40_06540	COG1464	Belongs to the NlpA lipoprotein family
FOB40_06555	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FOB40_06555	COG0574	Belongs to the PEP-utilizing enzyme family
FOB40_06560	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FOB40_06585	COG0840	transmembrane signaling receptor activity
FOB40_06590	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOB40_06590	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOB40_06595	COG0509	glycine decarboxylation via glycine cleavage system
FOB40_06600	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FOB40_06605	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOB40_06610	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOB40_06620	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
FOB40_06630	COG2814	Major facilitator Superfamily
FOB40_06635	COG0625	glutathione transferase activity
FOB40_06645	COG0483	inositol monophosphate 1-phosphatase activity
FOB40_06655	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOB40_06670	COG1086	Polysaccharide biosynthesis protein
FOB40_06675	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOB40_06685	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FOB40_06690	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FOB40_06705	COG2089	acid synthase
FOB40_06765	COG0301	tRNA thio-modification
FOB40_06765	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOB40_06780	COG4953	penicillin-binding protein 1C
FOB40_06785	COG2373	Large extracellular alpha-helical protein
FOB40_06795	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOB40_06805	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOB40_06815	COG1252	NADH dehydrogenase
FOB40_06825	COG2233	PERMEase
FOB40_06835	COG2354	Protein conserved in bacteria
FOB40_06850	COG1301	dicarboxylic acid transport
FOB40_06865	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FOB40_06880	COG0537	adenosine 5'-monophosphoramidase activity
FOB40_06915	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOB40_06920	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOB40_06930	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOB40_06935	COG0287	Prephenate dehydrogenase
FOB40_06935	COG1605	Chorismate mutase
FOB40_06945	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FOB40_06950	COG0505	Belongs to the CarA family
FOB40_06955	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FOB40_06970	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOB40_06975	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FOB40_06980	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOB40_06985	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOB40_06990	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOB40_06995	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
FOB40_07025	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOB40_07030	COG0861	Integral membrane protein TerC family
FOB40_07040	COG0444	Belongs to the ABC transporter superfamily
FOB40_07045	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOB40_07050	COG0601	transmembrane transport
FOB40_07060	COG2095	MarC family integral membrane protein
FOB40_07065	COG1454	alcohol dehydrogenase
FOB40_07065	COG1012	belongs to the aldehyde dehydrogenase family
FOB40_07070	COG0217	transcriptional regulatory protein
FOB40_07075	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FOB40_07085	COG1801	Protein of unknown function DUF72
FOB40_07090	COG4106	trans-aconitate 2-methyltransferase activity
FOB40_07095	COG0500	methyltransferase
FOB40_07115	COG0450	alkyl hydroperoxide reductase
FOB40_07120	COG0583	DNA-binding transcription factor activity
FOB40_07125	COG0791	NLP P60 protein
FOB40_07135	COG0583	DNA-binding transcription factor activity
FOB40_07140	COG2610	gluconate transmembrane transporter activity
FOB40_07145	COG3048	D-serine ammonia-lyase activity
FOB40_07155	COG0538	isocitrate dehydrogenase activity
FOB40_07160	COG2207	Transcriptional regulator
FOB40_07170	COG0840	transmembrane signaling receptor activity
FOB40_07175	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOB40_07190	COG3152	Membrane
FOB40_07225	COG1309	transcriptional regulator
FOB40_07260	COG0534	Mate efflux family protein
FOB40_07270	COG2841	Protein conserved in bacteria
FOB40_07280	COG5001	Diguanylate cyclase
FOB40_07280	COG3300	MHYT domain
FOB40_07285	COG3132	Protein of unknown function, DUF480
FOB40_07315	COG0708	Exodeoxyribonuclease III
FOB40_07350	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOB40_07355	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOB40_07370	COG1120	ATPase activity
FOB40_07375	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOB40_07380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOB40_07385	COG2375	cellular response to nickel ion
FOB40_07390	COG0784	Response regulator, receiver
FOB40_07390	COG3437	response regulator, receiver
FOB40_07400	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOB40_07405	COG0328	RNA-DNA hybrid ribonuclease activity
FOB40_07410	COG2226	methyltransferase
FOB40_07415	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOB40_07420	COG0741	lytic transglycosylase activity
FOB40_07420	COG1388	LysM domain
FOB40_07445	COG5002	protein histidine kinase activity
FOB40_07450	COG0745	RESPONSE REGULATOR receiver
FOB40_07455	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOB40_07460	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOB40_07480	COG1609	Transcriptional regulator
FOB40_07485	COG2182	Extracellular solute-binding protein
FOB40_07490	COG0840	transmembrane signaling receptor activity
FOB40_07505	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOB40_07515	COG2723	6-phospho-beta-galactosidase activity
FOB40_07520	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOB40_07535	COG1388	LysM domain
FOB40_07535	COG1376	ErfK ybiS ycfS ynhG family protein
FOB40_07545	COG0471	metal ion transport
FOB40_07555	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
FOB40_07560	COG0791	NLP P60 protein
FOB40_07580	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FOB40_07585	COG0788	formyltetrahydrofolate deformylase activity
FOB40_07595	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOB40_07610	COG1196	nuclear chromosome segregation
FOB40_07610	COG0739	heme binding
FOB40_07610	COG0741	lytic transglycosylase activity
FOB40_07615	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOB40_07625	COG0436	Aminotransferase
FOB40_07630	COG1288	antiporter activity
FOB40_07635	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOB40_07650	COG2964	Protein conserved in bacteria
FOB40_07655	COG3681	Belongs to the UPF0597 family
FOB40_07665	COG0814	amino acid
FOB40_07685	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FOB40_07695	COG1166	arginine decarboxylase activity
FOB40_07705	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOB40_07730	COG2353	YceI-like domain
FOB40_07735	COG0583	DNA-binding transcription factor activity
FOB40_07745	COG2759	Belongs to the formate--tetrahydrofolate ligase family
FOB40_07750	COG0840	transmembrane signaling receptor activity
FOB40_07755	COG0302	gtp cyclohydrolase
FOB40_07765	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOB40_07770	COG2267	carboxylic ester hydrolase activity
FOB40_07775	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FOB40_07790	COG0314	molybdopterin synthase activity
FOB40_07795	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FOB40_07800	COG0315	cyclic pyranopterin monophosphate synthase activity
FOB40_07805	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOB40_07810	COG3005	denitrification pathway
FOB40_07820	COG0348	domain, Protein
FOB40_07825	COG0437	4 iron, 4 sulfur cluster binding
FOB40_07830	COG0243	molybdopterin cofactor binding
FOB40_07840	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOB40_07845	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOB40_07850	COG3850	Histidine kinase
FOB40_07855	COG2197	response regulator
FOB40_07865	COG0784	Response regulator, receiver
FOB40_07865	COG2205	protein histidine kinase activity
FOB40_07885	COG0121	glutamine amidotransferase
FOB40_07890	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FOB40_07895	COG1960	acyl-CoA dehydrogenase activity
FOB40_07900	COG1473	amidohydrolase
FOB40_07910	COG2867	negative regulation of translational initiation
FOB40_07915	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FOB40_07925	COG2205	protein histidine kinase activity
FOB40_07925	COG0784	Response regulator, receiver
FOB40_07935	COG3383	formate dehydrogenase (NAD+) activity
FOB40_07965	COG0210	DNA helicase
FOB40_07990	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOB40_07995	COG0426	domain, Protein
FOB40_07995	COG1773	rubredoxin
FOB40_08000	COG3604	Transcriptional regulator
FOB40_08005	COG2197	response regulator
FOB40_08010	COG3706	GGDEF domain
FOB40_08020	COG2199	diguanylate cyclase activity
FOB40_08020	COG2203	Gaf domain
FOB40_08025	COG2199	diguanylate cyclase activity
FOB40_08025	COG2203	Gaf domain
FOB40_08115	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOB40_08125	COG1960	acyl-CoA dehydrogenase activity
FOB40_08130	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOB40_08140	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FOB40_08145	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOB40_08150	COG1263	PTS System
FOB40_08150	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOB40_08155	COG1609	Transcriptional regulator
FOB40_08165	COG0789	Transcriptional regulator
FOB40_08175	COG4821	SIS domain
FOB40_08195	COG0783	Belongs to the Dps family
FOB40_08220	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_08220	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOB40_08220	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOB40_08225	COG2271	Major facilitator Superfamily
FOB40_08230	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOB40_08240	COG1187	pseudouridine synthase activity
FOB40_08250	COG0482	sulfurtransferase activity
FOB40_08255	COG2915	High frequency lysogenization protein hflD homolog
FOB40_08260	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOB40_08265	COG2850	peptidyl-arginine hydroxylation
FOB40_08285	COG0625	glutathione transferase activity
FOB40_08290	COG0259	pyridoxamine-phosphate oxidase activity
FOB40_08320	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOB40_08320	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOB40_08330	COG1882	Formate acetyltransferase
FOB40_08335	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOB40_08345	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOB40_08350	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FOB40_08360	COG2853	Lipoprotein
FOB40_08370	COG3088	subunit of a heme lyase
FOB40_08370	COG4235	cytochrome complex assembly
FOB40_08375	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOB40_08380	COG1138	Cytochrome C-type biogenesis protein
FOB40_08385	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FOB40_08390	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOB40_08395	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOB40_08400	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOB40_08415	COG0835	chemotaxis
FOB40_08425	COG1192	Involved in chromosome partitioning
FOB40_08430	COG1360	Flagellar Motor Protein
FOB40_08435	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOB40_08440	COG2201	protein-glutamate methylesterase activity
FOB40_08445	COG2198	Histidine kinase
FOB40_08445	COG0643	Histidine kinase
FOB40_08450	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FOB40_08465	COG0455	bacterial-type flagellum organization
FOB40_08475	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOB40_08485	COG1684	flagellar biosynthetic protein fliR
FOB40_08490	COG1987	bacterial-type flagellum assembly
FOB40_08540	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOB40_08550	COG1677	Flagellar hook-basal body complex protein FliE
FOB40_08570	COG0469	pyruvate kinase activity
FOB40_08575	COG1737	Transcriptional regulator
FOB40_08580	COG0837	glucose binding
FOB40_08610	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOB40_08630	COG0281	malic enzyme
FOB40_08650	COG0437	4 iron, 4 sulfur cluster binding
FOB40_08655	COG3383	formate dehydrogenase (NAD+) activity
FOB40_08655	COG3383	formate dehydrogenase (NAD+) activity
FOB40_08690	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOB40_08700	COG3852	Histidine kinase
FOB40_08715	COG4662	Binding-protein-dependent transport system inner membrane component
FOB40_08725	COG0746	molybdenum cofactor guanylyltransferase activity
FOB40_08730	COG0303	'Molybdopterin
FOB40_08735	COG1289	transmembrane transporter activity
FOB40_08740	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FOB40_08770	COG3220	belongs to the UPF0276 family
FOB40_08800	COG2205	protein histidine kinase activity
FOB40_08800	COG0784	Response regulator, receiver
FOB40_08815	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOB40_08820	COG0444	Belongs to the ABC transporter superfamily
FOB40_08825	COG4608	Belongs to the ABC transporter superfamily
FOB40_08835	COG2971	BadF BadG BcrA BcrD
FOB40_08845	COG0840	transmembrane signaling receptor activity
FOB40_08855	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOB40_08860	COG3724	N-succinylarginine dihydrolase activity
FOB40_08885	COG2197	response regulator
FOB40_08910	COG2203	Gaf domain
FOB40_08910	COG2199	diguanylate cyclase activity
FOB40_08910	COG2200	EAL domain
FOB40_08920	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOB40_08930	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FOB40_08935	COG3706	GGDEF domain
FOB40_08940	COG2211	Major facilitator Superfamily
FOB40_08945	COG0616	signal peptide processing
FOB40_08950	COG1028	Short-chain dehydrogenase reductase Sdr
FOB40_08955	COG0583	DNA-binding transcription factor activity
FOB40_08965	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOB40_08985	COG1881	PFAM PEBP family protein
FOB40_08995	COG3408	Glycogen debranching enzyme
FOB40_08995	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FOB40_09005	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FOB40_09020	COG1301	dicarboxylic acid transport
FOB40_09025	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FOB40_09030	COG2912	Transglutaminase-like superfamily
FOB40_09040	COG2890	protein-(glutamine-N5) methyltransferase activity
FOB40_09045	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FOB40_09050	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FOB40_09055	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FOB40_09060	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FOB40_09070	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FOB40_09075	COG0737	Belongs to the 5'-nucleotidase family
FOB40_09080	COG0193	aminoacyl-tRNA hydrolase activity
FOB40_09085	COG0012	GTP binding
FOB40_09130	COG0490	domain, Protein
FOB40_09130	COG0471	metal ion transport
FOB40_09140	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FOB40_09165	COG0366	Alpha amylase catalytic
FOB40_09170	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOB40_09170	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOB40_09170	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOB40_09170	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOB40_09180	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOB40_09195	COG1012	belongs to the aldehyde dehydrogenase family
FOB40_09205	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOB40_09210	COG0512	Glutamine amidotransferase of anthranilate synthase
FOB40_09220	COG0180	Tryptophanyl-tRNA synthetase
FOB40_09230	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOB40_09235	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FOB40_09245	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FOB40_09250	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOB40_09280	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FOB40_09285	COG0583	DNA-binding transcription factor activity
FOB40_09305	COG0583	DNA-binding transcription factor activity
FOB40_09315	COG0739	heme binding
FOB40_09325	COG3264	Mechanosensitive ion channel
FOB40_09325	COG1511	domain protein
FOB40_09330	COG0584	glycerophosphoryl diester phosphodiesterase
FOB40_09340	COG1053	succinate dehydrogenase
FOB40_09345	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOB40_09350	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FOB40_09355	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FOB40_09360	COG3366	ferrous iron transmembrane transporter activity
FOB40_09365	COG0700	Nucleoside recognition
FOB40_09370	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOB40_09380	COG3214	Protein conserved in bacteria
FOB40_09420	COG4221	oxidoreductase activity
FOB40_09430	COG0745	RESPONSE REGULATOR receiver
FOB40_09435	COG0642	Histidine kinase
FOB40_09445	COG0516	GMP reductase activity
FOB40_09455	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOB40_09465	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOB40_09475	COG5001	Diguanylate cyclase
FOB40_09475	COG3447	MASE1 domain protein
FOB40_09475	COG5002	protein histidine kinase activity
FOB40_09495	COG0583	DNA-binding transcription factor activity
FOB40_09500	COG3706	GGDEF domain
FOB40_09510	COG1335	isochorismatase
FOB40_09515	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOB40_09520	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOB40_09525	COG1702	phosphate starvation-inducible protein PhoH
FOB40_09530	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FOB40_09535	COG4535	Mg2 and Co2 transporter CorC
FOB40_09540	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FOB40_09545	COG0789	Transcriptional regulator
FOB40_09560	COG1970	mechanosensitive ion channel activity
FOB40_09565	COG4974	Belongs to the 'phage' integrase family
FOB40_09570	COG0716	FMN binding
FOB40_09580	COG0312	modulator of DNA gyrase
FOB40_09585	COG2888	peptidyl-tyrosine sulfation
FOB40_09590	COG0495	leucyl-tRNA aminoacylation
FOB40_09605	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FOB40_09610	COG0799	negative regulation of ribosome biogenesis
FOB40_09615	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FOB40_09620	COG0768	penicillin binding
FOB40_09625	COG0772	Belongs to the SEDS family
FOB40_09630	COG2951	lytic endotransglycosylase activity
FOB40_09635	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FOB40_09640	COG1686	Belongs to the peptidase S11 family
FOB40_09645	COG2921	Belongs to the UPF0250 family
FOB40_09650	COG0321	lipoyl(octanoyl) transferase activity
FOB40_09655	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FOB40_09675	COG3139	Protein of unknown function (DUF1315)
FOB40_09680	COG0252	asparaginase activity
FOB40_09685	COG0786	glutamate:sodium symporter activity
FOB40_09700	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FOB40_09710	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOB40_09725	COG3610	response to peptide
FOB40_09730	COG2966	Psort location CytoplasmicMembrane, score
FOB40_09740	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOB40_09755	COG2897	thiosulfate sulfurtransferase activity
FOB40_09760	COG2066	Belongs to the glutaminase family
FOB40_09765	COG3171	Protein conserved in bacteria
FOB40_09770	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FOB40_09775	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOB40_09780	COG2200	EAL domain
FOB40_09785	COG1090	epimerase
FOB40_09790	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FOB40_09795	COG4181	ATPase activity
FOB40_09800	COG2755	lipolytic protein G-D-S-L family
FOB40_09805	COG0835	chemotaxis
FOB40_09805	COG0784	Response regulator, receiver
FOB40_09850	COG3397	chitin binding
FOB40_09865	COG3706	GGDEF domain
FOB40_09875	COG0784	Response regulator, receiver
FOB40_09875	COG2205	protein histidine kinase activity
FOB40_09875	COG5002	protein histidine kinase activity
FOB40_09885	COG3655	Transcriptional regulator
FOB40_09895	COG2814	Major facilitator Superfamily
FOB40_09925	COG0748	coenzyme F420 binding
FOB40_09930	COG3721	Heme iron utilization protein
FOB40_09940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOB40_09955	COG3340	Belongs to the peptidase S51 family
FOB40_09960	COG0432	Pfam Uncharacterised protein family UPF0047
FOB40_09965	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOB40_09970	COG0305	Participates in initiation and elongation during chromosome replication
FOB40_09980	COG1047	Peptidyl-prolyl cis-trans
FOB40_09985	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FOB40_09995	COG0835	chemotaxis
FOB40_09995	COG0784	Response regulator, receiver
FOB40_10000	COG0429	hydrolase of the alpha beta-hydrolase fold
FOB40_10005	COG2203	Gaf domain
FOB40_10005	COG5001	Diguanylate cyclase
FOB40_10005	COG3706	GGDEF domain
FOB40_10005	COG4251	negative regulation of phosphorylation
FOB40_10010	COG3089	Belongs to the UPF0270 family
FOB40_10015	COG3954	Phosphoribulokinase
FOB40_10030	COG1765	OsmC-like protein
FOB40_10035	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOB40_10070	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOB40_10075	COG2313	pseudouridylate synthase activity
FOB40_10100	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
FOB40_10125	COG0569	domain protein
FOB40_10125	COG2985	domain, Protein
FOB40_10130	COG1272	protein, Hemolysin III
FOB40_10135	COG0076	glutamate decarboxylase activity
FOB40_10140	COG2917	probably involved in intracellular septation
FOB40_10145	COG2350	Protein conserved in bacteria
FOB40_10155	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FOB40_10160	COG1381	Involved in DNA repair and RecF pathway recombination
FOB40_10175	COG0681	Belongs to the peptidase S26 family
FOB40_10180	COG0481	GTPase activity
FOB40_10190	COG3026	antisigma factor binding
FOB40_10195	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FOB40_10200	COG1595	DNA-templated transcription, initiation
FOB40_10205	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOB40_10215	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FOB40_10220	COG0354	folic acid binding
FOB40_10245	COG4232	protein-disulfide reductase activity
FOB40_10260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOB40_10265	COG0191	fructose-bisphosphate aldolase activity
FOB40_10270	COG0126	phosphoglycerate kinase activity
FOB40_10275	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOB40_10280	COG1940	carbohydrate kinase activity
FOB40_10285	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FOB40_10290	COG2816	NAD+ diphosphatase activity
FOB40_10300	COG4991	sh3 domain protein
FOB40_10305	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOB40_10315	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FOB40_10345	COG4191	Histidine kinase
FOB40_10400	COG1858	cytochrome C peroxidase
FOB40_10405	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
FOB40_10415	COG2199	diguanylate cyclase activity
FOB40_10415	COG2203	Gaf domain
FOB40_10420	COG0513	Belongs to the DEAD box helicase family
FOB40_10455	COG0154	amidase activity
FOB40_10460	COG2957	Belongs to the agmatine deiminase family
FOB40_10475	COG1902	pentaerythritol trinitrate reductase activity
FOB40_10490	COG1238	metal cluster binding
FOB40_10495	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FOB40_10500	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FOB40_10505	COG0585	pseudouridine synthase activity
FOB40_10515	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FOB40_10520	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FOB40_10525	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOB40_10535	COG1376	ErfK ybiS ycfS ynhG family protein
FOB40_10540	COG0668	transmembrane transport
FOB40_10550	COG2731	YhcH YjgK YiaL family protein
FOB40_10560	COG1794	racemase activity, acting on amino acids and derivatives
FOB40_10575	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOB40_10595	COG0488	(ABC) transporter
FOB40_10605	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FOB40_10645	COG0148	phosphopyruvate hydratase activity
FOB40_10650	COG0504	CTP synthase activity
FOB40_10655	COG3956	TIGRFAM MazG family protein
FOB40_10660	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOB40_10665	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOB40_10675	COG4807	Protein conserved in bacteria
FOB40_10680	COG3023	N-Acetylmuramoyl-L-alanine amidase
FOB40_10685	COG0783	Belongs to the Dps family
FOB40_10690	COG1151	hydroxylamine reductase activity
FOB40_10695	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOB40_10700	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOB40_10705	COG0671	phosphoesterase, PA-phosphatase related
FOB40_10710	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOB40_10715	COG0163	prenyltransferase activity
FOB40_10730	COG1131	(ABC) transporter
FOB40_10735	COG0842	Transport permease protein
FOB40_10740	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
FOB40_10745	COG1924	4 iron, 4 sulfur cluster binding
FOB40_10775	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FOB40_10780	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FOB40_10785	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FOB40_10795	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOB40_10800	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOB40_10805	COG1489	DNA binding
FOB40_10815	COG1643	Atp-dependent helicase
FOB40_10820	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOB40_10825	COG0346	lactoylglutathione lyase activity
FOB40_10830	COG2076	Multidrug Resistance protein
FOB40_10835	COG2076	Multidrug Resistance protein
FOB40_10845	COG0784	Response regulator, receiver
FOB40_10845	COG3437	response regulator, receiver
FOB40_10850	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FOB40_10865	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FOB40_10900	COG0840	transmembrane signaling receptor activity
FOB40_10915	COG0529	Catalyzes the synthesis of activated sulfate
FOB40_10920	COG0471	metal ion transport
FOB40_10920	COG3273	potassium ion transport
FOB40_10925	COG2895	sulfate adenylyltransferase (ATP) activity
FOB40_10930	COG0175	sulfate reduction
FOB40_10935	COG1648	precorrin-2 dehydrogenase activity
FOB40_10935	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOB40_10940	COG0330	HflC and HflK could
FOB40_10945	COG1585	Membrane protein implicated in regulation of membrane protease activity
FOB40_10950	COG0840	transmembrane signaling receptor activity
FOB40_10955	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FOB40_10965	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOB40_10970	COG1640	4-alpha-glucanotransferase
FOB40_10975	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOB40_11010	COG1522	sequence-specific DNA binding
FOB40_11025	COG0561	phosphatase activity
FOB40_11040	COG0733	neurotransmitter:sodium symporter activity
FOB40_11050	COG0733	neurotransmitter:sodium symporter activity
FOB40_11115	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FOB40_11120	COG2885	chlorophyll binding
FOB40_11125	COG0823	Involved in the tonB-independent uptake of proteins
FOB40_11140	COG0811	peptide transport
FOB40_11145	COG0824	Thioesterase
FOB40_11150	COG3790	cyd operon protein YbgE
FOB40_11155	COG4890	Cyd operon protein YbgT
FOB40_11160	COG1294	oxidase, subunit
FOB40_11170	COG2255	four-way junction helicase activity
FOB40_11175	COG0632	four-way junction helicase activity
FOB40_11180	COG0840	transmembrane signaling receptor activity
FOB40_11190	COG2771	luxR family
FOB40_11195	COG3916	Acyl-homoserine-lactone synthase
FOB40_11205	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
FOB40_11210	COG5001	Diguanylate cyclase
FOB40_11210	COG4251	negative regulation of phosphorylation
FOB40_11210	COG2203	Gaf domain
FOB40_11210	COG3706	GGDEF domain
FOB40_11220	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOB40_11230	COG2995	paraquat-inducible protein a
FOB40_11235	COG3008	intermembrane lipid transfer
FOB40_11235	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOB40_11245	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOB40_11250	COG0442	prolyl-tRNA aminoacylation
FOB40_11255	COG4221	oxidoreductase activity
FOB40_11270	COG1024	Enoyl-CoA hydratase
FOB40_11280	COG0110	maltose O-acetyltransferase activity
FOB40_11290	COG4166	transmembrane transport
FOB40_11300	COG0840	transmembrane signaling receptor activity
FOB40_11305	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOB40_11345	COG3778	Protein conserved in bacteria
FOB40_11350	COG3299	homolog of phage Mu protein gp47
FOB40_11390	COG4386	tail sheath protein
FOB40_11430	COG0616	signal peptide processing
FOB40_11445	COG4626	Terminase
FOB40_11445	COG1802	Transcriptional regulator
FOB40_11475	COG2771	luxR family
FOB40_11515	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FOB40_11595	COG1846	Transcriptional regulator
FOB40_11605	COG3646	Phage regulatory protein
FOB40_11690	COG0735	belongs to the Fur family
FOB40_11715	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOB40_11720	COG0513	Belongs to the DEAD box helicase family
FOB40_11725	COG2153	protein acetylation
FOB40_11735	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOB40_11740	COG0557	exoribonuclease II activity
FOB40_11745	COG3706	GGDEF domain
FOB40_11750	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FOB40_11750	COG2885	chlorophyll binding
FOB40_11755	COG3240	lipase activity
FOB40_11760	COG3111	PFAM Bacterial OB fold (BOF) protein
FOB40_11770	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FOB40_11775	COG1194	a g-specific adenine glycosylase
FOB40_11780	COG0617	tRNA 3'-terminal CCA addition
FOB40_11800	COG3068	Protein conserved in bacteria
FOB40_11810	COG0739	heme binding
FOB40_11830	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FOB40_11835	COG1121	(ABC) transporter
FOB40_11840	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOB40_11845	COG0583	DNA-binding transcription factor activity
FOB40_11850	COG0697	spore germination
FOB40_11855	COG1573	uracil-dna glycosylase
FOB40_11870	COG2827	Endonuclease containing a URI domain
FOB40_11885	COG1842	Phage shock protein A
FOB40_11890	COG0204	Acyl-transferase
FOB40_11910	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOB40_11915	COG0583	DNA-binding transcription factor activity
FOB40_11920	COG2084	Dehydrogenase
FOB40_11950	COG3104	oligopeptide transport
FOB40_11965	COG0187	DNA topoisomerase II activity
FOB40_11970	COG3150	esterase
FOB40_11980	COG3151	Protein conserved in bacteria
FOB40_11985	COG0494	nUDIX hydrolase
FOB40_11990	COG1538	Outer membrane efflux protein
FOB40_11995	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOB40_11995	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOB40_12000	COG1560	Kdo2-lipid A biosynthetic process
FOB40_12005	COG2213	PTS system mannitol-specific
FOB40_12005	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_12010	COG0246	Mannitol dehydrogenase
FOB40_12015	COG3722	fumarate hydratase activity
FOB40_12025	COG0484	heat shock protein binding
FOB40_12045	COG1671	Belongs to the UPF0178 family
FOB40_12050	COG1988	membrane-bound metal-dependent
FOB40_12055	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOB40_12060	COG0513	Belongs to the DEAD box helicase family
FOB40_12085	COG1575	Belongs to the MenA family. Type 1 subfamily
FOB40_12090	COG1169	isochorismate synthase
FOB40_12095	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FOB40_12100	COG0596	Alpha beta hydrolase
FOB40_12105	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOB40_12110	COG1441	menaquinone biosynthetic process
FOB40_12115	COG0318	PFAM AMP-dependent synthetase and ligase
FOB40_12120	COG3291	Pkd domain containing protein
FOB40_12125	COG2949	membrane
FOB40_12130	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOB40_12140	COG0784	Response regulator, receiver
FOB40_12140	COG0835	chemotaxis
FOB40_12150	COG1444	tRNA N-acetyltransferase activity
FOB40_12170	COG1803	Methylglyoxal synthase
FOB40_12175	COG1979	alcohol dehydrogenase
FOB40_12190	COG4221	oxidoreductase activity
FOB40_12230	COG1368	sulfuric ester hydrolase activity
FOB40_12235	COG1522	sequence-specific DNA binding
FOB40_12245	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FOB40_12255	COG1058	Belongs to the CinA family
FOB40_12255	COG1546	Belongs to the CinA family
FOB40_12265	COG0561	phosphatase activity
FOB40_12275	COG2926	Belongs to the UPF0265 family
FOB40_12310	COG1396	sequence-specific DNA binding
FOB40_12315	COG3135	benzoate transporter
FOB40_12340	COG0840	transmembrane signaling receptor activity
FOB40_12345	COG3047	cAMP biosynthetic process
FOB40_12350	COG3706	GGDEF domain
FOB40_12355	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOB40_12375	COG1462	curli production assembly transport component CsgG
FOB40_12390	COG2197	response regulator
FOB40_12410	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOB40_12420	COG1278	Cold shock
FOB40_12425	COG2252	PERMEase
FOB40_12430	COG2376	Dihydroxyacetone kinase
FOB40_12435	COG1461	Dihydroxyacetone kinase
FOB40_12450	COG3284	Transcriptional regulator
FOB40_12465	COG0628	permease
FOB40_12470	COG0671	phosphoesterase, PA-phosphatase related
FOB40_12485	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FOB40_12510	COG0456	acetyltransferase
FOB40_12515	COG3133	Outer membrane lipoprotein
FOB40_12520	COG0004	ammonium transporteR
FOB40_12525	COG3706	GGDEF domain
FOB40_12535	COG3932	Exopolysaccharide synthesis, ExoD
FOB40_12540	COG0814	amino acid
FOB40_12545	COG3706	GGDEF domain
FOB40_12555	COG0110	maltose O-acetyltransferase activity
FOB40_12560	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FOB40_12570	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOB40_12575	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOB40_12585	COG0137	argininosuccinate synthase activity
FOB40_12590	COG0165	Argininosuccinate lyase
FOB40_12635	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOB40_12640	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOB40_12655	COG0477	Major facilitator Superfamily
FOB40_12670	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOB40_12675	COG0523	cobalamin synthesis protein
FOB40_12685	COG2200	EAL domain
FOB40_12690	COG1049	propionate catabolic process, 2-methylcitrate cycle
FOB40_12695	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOB40_12700	COG0840	transmembrane signaling receptor activity
FOB40_12710	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOB40_12715	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOB40_12720	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FOB40_12725	COG2186	Transcriptional regulator
FOB40_12755	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOB40_12760	COG1459	type II secretion system
FOB40_12775	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FOB40_12780	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FOB40_12785	COG0494	nUDIX hydrolase
FOB40_12790	COG0653	protein targeting
FOB40_12800	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FOB40_12805	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOB40_12810	COG0849	cell division
FOB40_12820	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOB40_12825	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FOB40_12830	COG0772	Belongs to the SEDS family
FOB40_12835	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FOB40_12840	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOB40_12845	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOB40_12855	COG0768	penicillin binding
FOB40_12860	COG3116	cell division
FOB40_12865	COG0275	rRNA processing
FOB40_12870	COG2001	Belongs to the MraZ family
FOB40_12880	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FOB40_12885	COG3107	peptidoglycan biosynthetic process
FOB40_12890	COG0792	nuclease activity
FOB40_12895	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FOB40_12905	COG2969	positive regulation of protein catabolic process
FOB40_12910	COG0625	glutathione transferase activity
FOB40_12915	COG2857	Cytochrome c1
FOB40_12920	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOB40_12925	COG0723	plastoquinol--plastocyanin reductase activity
FOB40_12930	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FOB40_12935	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FOB40_12940	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FOB40_12950	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOB40_12955	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOB40_12985	COG3964	amidohydrolase
FOB40_13000	COG3711	transcriptional antiterminator
FOB40_13000	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_13005	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_13010	COG1660	Displays ATPase and GTPase activities
FOB40_13015	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_13030	COG1137	ATPase activity
FOB40_13035	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FOB40_13040	COG3117	lipopolysaccharide transmembrane transporter activity
FOB40_13045	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FOB40_13050	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FOB40_13050	COG0517	IMP dehydrogenase activity
FOB40_13055	COG1127	ABC transporter
FOB40_13060	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOB40_13065	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOB40_13070	COG2854	intermembrane phospholipid transfer
FOB40_13080	COG5007	Belongs to the BolA IbaG family
FOB40_13085	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOB40_13090	COG0312	modulator of DNA gyrase
FOB40_13095	COG3028	Belongs to the UPF0307 family
FOB40_13100	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FOB40_13120	COG1011	Hydrolase
FOB40_13135	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FOB40_13140	COG0019	diaminopimelate decarboxylase activity
FOB40_13150	COG1965	Belongs to the frataxin family
FOB40_13155	COG0400	carboxylic ester hydrolase activity
FOB40_13160	COG3072	Adenylate cyclase
FOB40_13165	COG0181	hydroxymethylbilane synthase activity
FOB40_13175	COG2959	enzyme of heme biosynthesis
FOB40_13190	COG1494	fructose-1,6-bisphosphatase
FOB40_13210	COG0531	amino acid
FOB40_13245	COG0795	lipopolysaccharide-transporting ATPase activity
FOB40_13250	COG0795	lipopolysaccharide-transporting ATPase activity
FOB40_13255	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOB40_13260	COG2927	DNA polymerase III (CHI subunit)
FOB40_13290	COG0753	catalase activity
FOB40_13315	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOB40_13320	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FOB40_13325	COG5380	lipid catabolic process
FOB40_13340	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FOB40_13345	COG4533	DNA binding
FOB40_13355	COG2873	o-acetylhomoserine
FOB40_13385	COG3842	ATPase activity
FOB40_13395	COG1175	transmembrane transport
FOB40_13425	COG3706	GGDEF domain
FOB40_13435	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOB40_13440	COG1074	ATP-dependent DNA helicase activity
FOB40_13445	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FOB40_13450	COG2259	Doxx family
FOB40_13455	COG1741	Belongs to the pirin family
FOB40_13465	COG0583	DNA-binding transcription factor activity
FOB40_13480	COG0745	RESPONSE REGULATOR receiver
FOB40_13490	COG3706	GGDEF domain
FOB40_13495	COG4771	TonB-dependent receptor
FOB40_13535	COG0203	ribosomal protein L17
FOB40_13540	COG0202	RNA polymerase activity
FOB40_13545	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FOB40_13550	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FOB40_13555	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FOB40_13560	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOB40_13565	COG0201	protein transport
FOB40_13570	COG0200	Binds to the 23S rRNA
FOB40_13575	COG1841	ribosomal large subunit assembly
FOB40_13580	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FOB40_13585	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FOB40_13590	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOB40_13595	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FOB40_13600	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FOB40_13605	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FOB40_13610	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FOB40_13615	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FOB40_13620	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FOB40_13625	COG0255	Belongs to the universal ribosomal protein uL29 family
FOB40_13630	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FOB40_13635	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FOB40_13640	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FOB40_13645	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FOB40_13650	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FOB40_13655	COG0089	rRNA binding
FOB40_13660	COG0088	Forms part of the polypeptide exit tunnel
FOB40_13665	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FOB40_13670	COG0051	transcription antitermination factor activity, RNA binding
FOB40_13685	COG0745	RESPONSE REGULATOR receiver
FOB40_13690	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOB40_13695	COG2183	response to ionizing radiation
FOB40_13715	COG0596	Alpha beta hydrolase
FOB40_13720	COG1040	competence protein
FOB40_13725	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FOB40_13725	COG0316	Belongs to the HesB IscA family
FOB40_13730	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FOB40_13735	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FOB40_13740	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOB40_13745	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FOB40_13750	COG4942	peptidase
FOB40_13760	COG1609	Transcriptional regulator
FOB40_13775	COG0800	Aldolase
FOB40_13785	COG3265	gluconokinase activity
FOB40_13790	COG2610	gluconate transmembrane transporter activity
FOB40_13795	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOB40_13800	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOB40_13810	COG0456	acetyltransferase
FOB40_13815	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOB40_13820	COG1490	D-aminoacyl-tRNA deacylase activity
FOB40_13825	COG1295	ribonuclease BN
FOB40_13830	COG0281	malic enzyme
FOB40_13835	COG0814	amino acid
FOB40_13840	COG0702	epimerase
FOB40_13850	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOB40_13855	COG0254	rRNA binding
FOB40_13870	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOB40_13875	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FOB40_13885	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FOB40_13895	COG0514	ATP-dependent DNA helicase (RecQ)
FOB40_13900	COG2050	protein possibly involved in aromatic compounds catabolism
FOB40_13920	COG2258	MOSC domain
FOB40_13925	COG1177	transmembrane transport
FOB40_13930	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOB40_13935	COG3842	ATPase activity
FOB40_13955	COG0174	glutamine synthetase
FOB40_13960	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOB40_13975	COG3045	CreA protein
FOB40_13980	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOB40_13985	COG0443	Heat shock 70 kDa protein
FOB40_14000	COG0366	Alpha amylase catalytic
FOB40_14015	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOB40_14025	COG4211	Belongs to the binding-protein-dependent transport system permease family
FOB40_14030	COG1129	ABC transporter
FOB40_14040	COG3250	beta-galactosidase activity
FOB40_14045	COG1609	Transcriptional regulator
FOB40_14050	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOB40_14055	COG1085	galactose-1-phosphate uridylyltransferase
FOB40_14060	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FOB40_14065	COG2017	converts alpha-aldose to the beta-anomer
FOB40_14070	COG1968	undecaprenyl-diphosphatase activity
FOB40_14080	COG1595	DNA-templated transcription, initiation
FOB40_14090	COG0018	arginyl-trna synthetase
FOB40_14100	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FOB40_14105	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FOB40_14115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOB40_14120	COG1131	(ABC) transporter
FOB40_14125	COG0842	Transport permease protein
FOB40_14130	COG0842	Transport permease protein
FOB40_14135	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOB40_14140	COG2146	nitrite reductase [NAD(P)H] activity
FOB40_14145	COG2116	formate transmembrane transporter activity
FOB40_14150	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOB40_14150	COG1648	precorrin-2 dehydrogenase activity
FOB40_14155	COG2239	Acts as a magnesium transporter
FOB40_14165	COG0737	Belongs to the 5'-nucleotidase family
FOB40_14195	COG0210	DNA helicase
FOB40_14210	COG1943	Transposase
FOB40_14240	COG1280	lysine exporter protein (LysE YggA)
FOB40_14265	COG1215	transferase activity, transferring glycosyl groups
FOB40_14270	COG3307	-O-antigen
FOB40_14280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOB40_14295	COG1063	alcohol dehydrogenase
FOB40_14300	COG3245	cytochrome
FOB40_14315	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOB40_14320	COG2166	iron-sulfur cluster assembly
FOB40_14325	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOB40_14360	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOB40_14370	COG0583	DNA-binding transcription factor activity
FOB40_14385	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOB40_14390	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOB40_14395	COG2223	nitrite transmembrane transporter activity
FOB40_14400	COG3279	Response regulator of the LytR AlgR family
FOB40_14405	COG3275	phosphorelay sensor kinase activity
FOB40_14410	COG2081	HI0933 family
FOB40_14415	COG1528	Iron-storage protein
FOB40_14420	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOB40_14425	COG0589	response to stress
FOB40_14465	COG3642	lipopolysaccharide core region biosynthetic process
FOB40_14470	COG0859	PFAM glycosyl transferase family 9
FOB40_14480	COG0194	GDP metabolic process
FOB40_14485	COG1758	RNA polymerase activity
FOB40_14490	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOB40_14495	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOB40_14505	COG2267	carboxylic ester hydrolase activity
FOB40_14510	COG0561	phosphatase activity
FOB40_14540	COG1309	transcriptional regulator
FOB40_14545	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOB40_14550	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOB40_14555	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOB40_14555	COG4191	Histidine kinase
FOB40_14560	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOB40_14585	COG2205	protein histidine kinase activity
FOB40_14590	COG0745	RESPONSE REGULATOR receiver
FOB40_14595	COG2814	Major facilitator Superfamily
FOB40_14610	COG3977	Valine--pyruvate aminotransferase
FOB40_14615	COG0071	Belongs to the small heat shock protein (HSP20) family
FOB40_14620	COG0071	Belongs to the small heat shock protein (HSP20) family
FOB40_14625	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FOB40_14635	COG2378	regulation of single-species biofilm formation
FOB40_14645	COG0187	DNA topoisomerase II activity
FOB40_14655	COG0592	DNA-directed DNA polymerase activity
FOB40_14660	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FOB40_14680	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FOB40_14685	COG0594	ribonuclease P activity
FOB40_14690	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FOB40_14695	COG0706	membrane insertase activity
FOB40_14700	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOB40_14705	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOB40_14710	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOB40_14715	COG1120	ATPase activity
FOB40_14720	COG4615	Cyclic peptide transporter
FOB40_14730	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FOB40_14735	COG0445	tRNA wobble uridine modification
FOB40_14740	COG0357	Ribosomal RNA small subunit methyltransferase G
FOB40_14745	COG1192	Involved in chromosome partitioning
FOB40_14750	COG1475	DNA binding
FOB40_14760	COG0356	it plays a direct role in the translocation of protons across the membrane
FOB40_14770	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FOB40_14775	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOB40_14780	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FOB40_14785	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FOB40_14790	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FOB40_14795	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FOB40_14800	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FOB40_14805	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOB40_14850	COG0297	glycogen (starch) synthase activity
FOB40_14850	COG0438	transferase activity, transferring glycosyl groups
FOB40_14865	COG4452	Inner membrane protein CreD
FOB40_14880	COG2205	protein histidine kinase activity
FOB40_14885	COG0745	RESPONSE REGULATOR receiver
FOB40_14890	COG1349	DNA-binding transcription factor activity
FOB40_14895	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOB40_14900	COG2771	luxR family
FOB40_14910	COG0811	peptide transport
FOB40_14915	COG0811	peptide transport
FOB40_14920	COG0848	biopolymer transport protein
FOB40_14925	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FOB40_14970	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FOB40_14975	COG0402	S-adenosylhomocysteine deaminase activity
FOB40_14980	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOB40_14985	COG2226	methyltransferase
FOB40_14990	COG3165	ubiquinone biosynthetic process from chorismate
FOB40_14995	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FOB40_15000	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOB40_15005	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOB40_15010	COG0805	protein transport
FOB40_15025	COG3397	chitin binding
FOB40_15030	COG3469	chitinase activity
FOB40_15050	COG0742	ribosomal rna small subunit methyltransferase
FOB40_15060	COG0248	Ppx GppA phosphatase
FOB40_15065	COG0513	Belongs to the DEAD box helicase family
FOB40_15070	COG3118	belongs to the thioredoxin family
FOB40_15075	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOB40_15085	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOB40_15095	COG5001	Diguanylate cyclase
FOB40_15100	COG2960	long-chain fatty acid transporting porin activity
FOB40_15115	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOB40_15135	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOB40_15145	COG1609	Transcriptional regulator
FOB40_15160	COG2188	Transcriptional regulator
FOB40_15185	COG0751	glycine-tRNA ligase activity
FOB40_15190	COG0752	glycyl-tRNA synthetase alpha subunit
FOB40_15195	COG2818	Glycosylase
FOB40_15200	COG2885	chlorophyll binding
FOB40_15205	COG0251	oxidation-reduction process
FOB40_15210	COG0425	Belongs to the sulfur carrier protein TusA family
FOB40_15225	COG2205	protein histidine kinase activity
FOB40_15230	COG0745	RESPONSE REGULATOR receiver
FOB40_15235	COG0183	Belongs to the thiolase family
FOB40_15240	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOB40_15240	COG1024	Enoyl-CoA hydratase
FOB40_15245	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOB40_15250	COG0006	proline dipeptidase activity
FOB40_15255	COG1739	Uncharacterized protein family UPF0029
FOB40_15260	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOB40_15265	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
FOB40_15295	COG0045	succinate-CoA ligase (ADP-forming) activity
FOB40_15295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOB40_15295	COG1042	CoA-binding domain protein
FOB40_15310	COG0583	DNA-binding transcription factor activity
FOB40_15315	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOB40_15320	COG0166	Belongs to the GPI family
FOB40_15325	COG0668	transmembrane transport
FOB40_15330	COG1309	transcriptional regulator
FOB40_15335	COG0756	dUTP diphosphatase activity
FOB40_15340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOB40_15345	COG2003	Belongs to the UPF0758 family
FOB40_15350	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FOB40_15355	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOB40_15365	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOB40_15370	COG2990	Protein conserved in bacteria
FOB40_15375	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FOB40_15380	COG0859	PFAM glycosyl transferase family 9
FOB40_15385	COG0463	Glycosyl transferase, family 2
FOB40_15390	COG0859	PFAM glycosyl transferase family 9
FOB40_15395	COG1519	Transferase
FOB40_15410	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_15415	COG1609	Transcriptional regulator
FOB40_15420	COG0604	alcohol dehydrogenase
FOB40_15445	COG3161	chorismate lyase activity
FOB40_15450	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FOB40_15455	COG2937	Belongs to the GPAT DAPAT family
FOB40_15460	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOB40_15475	COG0534	Mate efflux family protein
FOB40_15480	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOB40_15485	COG2205	protein histidine kinase activity
FOB40_15490	COG0745	RESPONSE REGULATOR receiver
FOB40_15500	COG1045	serine acetyltransferase
FOB40_15510	COG3074	FtsZ-dependent cytokinesis
FOB40_15515	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FOB40_15525	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOB40_15525	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOB40_15530	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOB40_15565	COG1609	Transcriptional regulator
FOB40_15570	COG3250	beta-galactosidase activity
FOB40_15575	COG2731	YhcH YjgK YiaL family protein
FOB40_15580	COG0531	amino acid
FOB40_15585	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOB40_15590	COG0531	amino acid
FOB40_15595	COG0385	Bile acid
FOB40_15600	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FOB40_15640	COG0583	DNA-binding transcription factor activity
FOB40_15655	COG0583	DNA-binding transcription factor activity
FOB40_15660	COG1561	YicC-like family, N-terminal region
FOB40_15665	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FOB40_15670	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FOB40_15685	COG3706	GGDEF domain
FOB40_15685	COG5001	Diguanylate cyclase
FOB40_15685	COG4251	negative regulation of phosphorylation
FOB40_15685	COG2203	Gaf domain
FOB40_15690	COG3084	Protein conserved in bacteria
FOB40_15700	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOB40_15705	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOB40_15715	COG1335	isochorismatase
FOB40_15725	COG1683	Conserved Protein
FOB40_15730	COG0204	Acyl-transferase
FOB40_15735	COG0204	Acyl-transferase
FOB40_15740	COG0606	chelatase, subunit chli
FOB40_15755	COG3978	acetolactate synthase activity
FOB40_15760	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOB40_15765	COG0129	dihydroxy-acid dehydratase activity
FOB40_15780	COG2391	methyltransferase activity
FOB40_15790	COG2962	Rard protein
FOB40_15800	COG1012	belongs to the aldehyde dehydrogenase family
FOB40_15805	COG1396	sequence-specific DNA binding
FOB40_15820	COG0519	Catalyzes the synthesis of GMP from XMP
FOB40_15820	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOB40_15825	COG0583	DNA-binding transcription factor activity
FOB40_15830	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOB40_15850	COG1322	Protein conserved in bacteria
FOB40_15855	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FOB40_15860	COG2204	response regulator
FOB40_15865	COG3852	Histidine kinase
FOB40_15875	COG0174	glutamine synthetase
FOB40_15885	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOB40_15890	COG0569	domain protein
FOB40_15895	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOB40_15895	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOB40_15900	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOB40_15905	COG0242	peptide deformylase activity
FOB40_15910	COG1652	LysM domain
FOB40_15915	COG0758	DNA mediated transformation
FOB40_15920	COG2922	Belongs to the Smg family
FOB40_15925	COG0551	DNA topoisomerase type I activity
FOB40_15935	COG0009	L-threonylcarbamoyladenylate synthase
FOB40_15940	COG0408	coproporphyrinogen oxidase activity
FOB40_15945	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOB40_15955	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FOB40_15970	COG3078	GTPase activator activity
FOB40_15980	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOB40_16005	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOB40_16010	COG1288	antiporter activity
FOB40_16015	COG1438	arginine binding
FOB40_16020	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
FOB40_16025	COG0540	Belongs to the ATCase OTCase family
FOB40_16040	COG0583	DNA-binding transcription factor activity
FOB40_16055	COG3040	lipid binding
FOB40_16060	COG2207	Transcriptional regulator
FOB40_16065	COG1979	alcohol dehydrogenase
FOB40_16070	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FOB40_16075	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FOB40_16085	COG2964	Protein conserved in bacteria
FOB40_16090	COG3681	Belongs to the UPF0597 family
FOB40_16100	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOB40_16105	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOB40_16110	COG0564	pseudouridine synthase activity
FOB40_16120	COG0542	response to heat
FOB40_16125	COG2502	aspartate--ammonia ligase
FOB40_16130	COG1522	sequence-specific DNA binding
FOB40_16140	COG5413	integral membrane protein
FOB40_16145	COG0516	GMP reductase activity
FOB40_16145	COG0517	IMP dehydrogenase activity
FOB40_16150	COG1028	Short-chain dehydrogenase reductase Sdr
FOB40_16165	COG2205	protein histidine kinase activity
FOB40_16175	COG2204	response regulator
FOB40_16210	COG0745	RESPONSE REGULATOR receiver
FOB40_16215	COG2205	protein histidine kinase activity
FOB40_16225	COG0243	molybdopterin cofactor binding
FOB40_16230	COG3005	denitrification pathway
FOB40_16235	COG4191	Histidine kinase
FOB40_16235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOB40_16265	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOB40_16270	COG0569	domain protein
FOB40_16275	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOB40_16300	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOB40_16310	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOB40_16315	COG0250	Participates in transcription elongation, termination and antitermination
FOB40_16320	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FOB40_16325	COG0081	regulation of translation
FOB40_16330	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FOB40_16335	COG0222	ribosome binding
FOB40_16340	COG0085	RNA polymerase activity
FOB40_16345	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FOB40_16350	COG2964	Protein conserved in bacteria
FOB40_16360	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FOB40_16370	COG2168	tRNA wobble position uridine thiolation
FOB40_16375	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FOB40_16380	COG0049	tRNA binding
FOB40_16385	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOB40_16390	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOB40_16395	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOB40_16450	COG3714	YhhN family
FOB40_16475	COG1301	dicarboxylic acid transport
FOB40_16485	COG2095	MarC family integral membrane protein
FOB40_16495	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOB40_16505	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FOB40_16510	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOB40_16525	COG1770	oligopeptidase
FOB40_16540	COG4221	oxidoreductase activity
FOB40_16545	COG0583	DNA-binding transcription factor activity
FOB40_16550	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOB40_16575	COG0742	ribosomal rna small subunit methyltransferase
FOB40_16580	COG0552	protein localization to endoplasmic reticulum
FOB40_16585	COG2884	Cell division ATP-binding protein ftsE
FOB40_16590	COG2177	Part of the ABC transporter FtsEX involved in
FOB40_16600	COG0288	reversible hydration of carbon dioxide
FOB40_16605	COG2188	Transcriptional regulator
FOB40_16610	COG1228	amidohydrolase
FOB40_16615	COG0010	Belongs to the arginase family
FOB40_16620	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FOB40_16625	COG2986	histidine ammonia-lyase
FOB40_16630	COG0387	Pfam Sodium calcium exchanger
FOB40_16635	COG2200	EAL domain
FOB40_16640	COG2199	diguanylate cyclase activity
FOB40_16640	COG2200	EAL domain
FOB40_16685	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOB40_16690	COG1459	type II secretion system
FOB40_16710	COG4968	Prepilin-type N-terminal cleavage methylation domain
FOB40_16735	COG1077	Cell shape determining protein MreB Mrl
FOB40_16740	COG1792	Involved in formation and maintenance of cell shape
FOB40_16745	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FOB40_16750	COG0424	maF-like protein
FOB40_16755	COG1530	ribonuclease E activity
FOB40_16760	COG3164	Protein of unknown function
FOB40_16770	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOB40_16775	COG0312	modulator of DNA gyrase
FOB40_16790	COG0477	Major facilitator Superfamily
FOB40_16835	COG0189	ligase activity
FOB40_16850	COG0745	RESPONSE REGULATOR receiver
FOB40_16870	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FOB40_16875	COG0352	thiamine-phosphate diphosphorylase activity
FOB40_16880	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOB40_16890	COG2022	thiamine diphosphate biosynthetic process
FOB40_16895	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FOB40_16905	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOB40_16920	COG0583	DNA-binding transcription factor activity
FOB40_16925	COG1380	Effector of murein hydrolase LrgA
FOB40_16930	COG1346	cytolysis
FOB40_16940	COG4667	esterase of the alpha-beta hydrolase superfamily
FOB40_16945	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FOB40_16950	COG1546	Belongs to the CinA family
FOB40_16955	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FOB40_16965	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOB40_16970	COG0527	aspartate kinase activity
FOB40_16975	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FOB40_17010	COG1686	Belongs to the peptidase S11 family
FOB40_17015	COG0586	Pfam SNARE associated Golgi protein
FOB40_17020	COG1253	flavin adenine dinucleotide binding
FOB40_17025	COG0252	asparaginase activity
FOB40_17045	COG1263	PTS System
FOB40_17045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOB40_17050	COG0366	Alpha amylase catalytic
FOB40_17055	COG0110	maltose O-acetyltransferase activity
FOB40_17065	COG0564	pseudouridine synthase activity
FOB40_17070	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOB40_17100	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FOB40_17100	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOB40_17115	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FOB40_17120	COG0038	chloride channel
FOB40_17130	COG0316	Belongs to the HesB IscA family
FOB40_17135	COG1757	Na H antiporter
FOB40_17175	COG0297	glycogen (starch) synthase activity
FOB40_17180	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOB40_17185	COG2813	Specifically methylates the guanine in position
FOB40_17190	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOB40_17200	COG1392	Phosphate transport regulator
FOB40_17205	COG0306	phosphate transporter
FOB40_17210	COG0460	homoserine dehydrogenase
FOB40_17210	COG0527	aspartate kinase activity
FOB40_17215	COG0626	cystathionine gamma-synthase activity
FOB40_17230	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOB40_17235	COG0814	amino acid
FOB40_17240	COG1218	3'(2'),5'-bisphosphate nucleotidase
FOB40_17245	COG0494	nUDIX hydrolase
FOB40_17250	COG1011	Hydrolase
FOB40_17265	COG0110	maltose O-acetyltransferase activity
FOB40_17270	COG3174	membrane
FOB40_17275	COG3397	chitin binding
FOB40_17280	COG0840	transmembrane signaling receptor activity
FOB40_17295	COG1649	PFAM Uncharacterised BCR, COG1649
FOB40_17295	COG0726	polysaccharide deacetylase
FOB40_17300	COG1215	transferase activity, transferring glycosyl groups
FOB40_17310	COG0543	2 iron, 2 sulfur cluster binding
FOB40_17310	COG0633	Ferredoxin
FOB40_17335	COG1328	CTP reductase activity
FOB40_17340	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOB40_17355	COG1448	Aminotransferase
FOB40_17360	COG2194	sulfuric ester hydrolase activity
FOB40_17380	COG1215	transferase activity, transferring glycosyl groups
FOB40_17385	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FOB40_17390	COG0457	Tetratricopeptide repeat
FOB40_17390	COG3118	belongs to the thioredoxin family
FOB40_17430	COG0513	Belongs to the DEAD box helicase family
FOB40_17440	COG3568	Endonuclease Exonuclease Phosphatase
FOB40_17460	COG3112	Uncharacterised protein family (UPF0231)
FOB40_17465	COG3835	regulator
FOB40_17470	COG2610	gluconate transmembrane transporter activity
FOB40_17475	COG1929	Belongs to the glycerate kinase type-1 family
FOB40_17490	COG0583	DNA-binding transcription factor activity
FOB40_17495	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOB40_17505	COG1872	DUF167
FOB40_17510	COG0762	integral membrane protein
FOB40_17515	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOB40_17520	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOB40_17535	COG3022	response to hydroperoxide
FOB40_17555	COG0347	Belongs to the P(II) protein family
FOB40_17560	COG1840	ABC-type Fe3 transport system, periplasmic component
FOB40_17570	COG3842	ATPase activity
FOB40_17575	COG2837	iron assimilation
FOB40_17580	COG1438	arginine binding
FOB40_17585	COG1126	abc transporter atp-binding protein
FOB40_17590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOB40_17595	COG4215	(ABC) transporter
FOB40_17600	COG4160	amino acid transport
FOB40_17605	COG0039	L-malate dehydrogenase activity
FOB40_17610	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FOB40_17615	COG1017	nitric oxide dioxygenase activity
FOB40_17615	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOB40_17625	COG4536	flavin adenine dinucleotide binding
FOB40_17630	COG4137	Cytochrome C assembly protein
FOB40_17635	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOB40_17640	COG0228	four-way junction DNA binding
FOB40_17645	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FOB40_17650	COG0336	Belongs to the RNA methyltransferase TrmD family
FOB40_17655	COG0335	large ribosomal subunit rRNA binding
FOB40_17665	COG3066	DNA modification
FOB40_17670	COG1051	belongs to the nudix hydrolase family
FOB40_17680	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FOB40_17685	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FOB40_17690	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FOB40_17700	COG0583	DNA-binding transcription factor activity
FOB40_17705	COG0640	Transcriptional regulator
FOB40_17710	COG0268	Binds directly to 16S ribosomal RNA
FOB40_17715	COG0728	peptidoglycan biosynthetic process
FOB40_17720	COG0196	riboflavin kinase activity
FOB40_17725	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FOB40_17730	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FOB40_17735	COG1047	Peptidyl-prolyl cis-trans
FOB40_17740	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FOB40_17785	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOB40_17785	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FOB40_17800	COG1854	S-ribosylhomocysteine lyase activity
FOB40_17810	COG4968	Prepilin-type N-terminal cleavage methylation domain
FOB40_17815	COG0084	hydrolase, TatD family'
FOB40_17820	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOB40_17830	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FOB40_17835	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOB40_17840	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FOB40_17855	COG0560	Phosphoserine phosphatase
FOB40_17870	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FOB40_17885	COG0776	regulation of translation
FOB40_17895	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOB40_17900	COG1914	H( )-stimulated, divalent metal cation uptake system
FOB40_17905	COG0360	Binds together with S18 to 16S ribosomal RNA
FOB40_17910	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FOB40_17915	COG0359	binds to the 23S rRNA
FOB40_17920	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOB40_17945	COG1064	alcohol dehydrogenase
FOB40_17950	COG1238	metal cluster binding
FOB40_17955	COG0612	Peptidase, M16
FOB40_17960	COG2918	glutathione biosynthetic process
FOB40_17965	COG1022	Amp-dependent synthetase and ligase
FOB40_17975	COG0456	acetyltransferase
FOB40_17990	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FOB40_17995	COG3706	GGDEF domain
FOB40_17995	COG0745	RESPONSE REGULATOR receiver
FOB40_18000	COG1028	Short-chain dehydrogenase reductase Sdr
FOB40_18015	COG0477	Major facilitator Superfamily
FOB40_18020	COG0583	DNA-binding transcription factor activity
FOB40_18030	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOB40_18035	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOB40_18045	COG0673	inositol 2-dehydrogenase activity
FOB40_18055	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FOB40_18060	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOB40_18065	COG3036	rescue of stalled ribosome
FOB40_18075	COG0138	bifunctional purine biosynthesis protein purh
FOB40_18080	COG0151	Belongs to the GarS family
FOB40_18100	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOB40_18110	COG1610	YqeY-like protein
FOB40_18115	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOB40_18120	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FOB40_18125	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOB40_18130	COG1027	Aspartate ammonia-lyase
FOB40_18135	COG3030	protein affecting phage T7 exclusion by the F plasmid
FOB40_18145	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FOB40_18150	COG0459	protein refolding
FOB40_18200	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOB40_18205	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FOB40_18210	COG1178	ABC-type Fe3 transport system permease component
FOB40_18215	COG4143	(ABC) transporter
FOB40_18230	COG0066	3-isopropylmalate dehydratase activity
FOB40_18235	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FOB40_18240	COG0473	3-isopropylmalate dehydrogenase activity
FOB40_18245	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOB40_18270	COG0028	Belongs to the TPP enzyme family
FOB40_18280	COG0440	acetolactate synthase activity
FOB40_18315	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FOB40_18330	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOB40_18360	COG0745	RESPONSE REGULATOR receiver
FOB40_18365	COG3104	oligopeptide transport
FOB40_18370	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOB40_18375	COG1555	photosystem II stabilization
FOB40_18380	COG0280	phosphate acetyltransferase
FOB40_18380	COG0857	belongs to the CobB CobQ family
FOB40_18385	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOB40_18390	COG3092	negative regulation of chromosome organization
FOB40_18395	COG3013	Belongs to the UPF0304 family
FOB40_18400	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOB40_18405	COG2716	regulation of RNA biosynthetic process
FOB40_18410	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOB40_18415	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FOB40_18420	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FOB40_18455	COG0784	Response regulator, receiver
FOB40_18455	COG5002	protein histidine kinase activity
FOB40_18455	COG2198	Histidine kinase
FOB40_18460	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FOB40_18490	COG1464	Belongs to the NlpA lipoprotein family
FOB40_18495	COG2011	ABC-type metal ion transport system permease component
FOB40_18500	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOB40_18520	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FOB40_18520	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FOB40_18525	COG0802	atpase or kinase
FOB40_18535	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOB40_18540	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOB40_18545	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FOB40_18550	COG1923	regulation of RNA biosynthetic process
FOB40_18555	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOB40_18560	COG0330	HflC and HflK could
FOB40_18565	COG0330	HflC and HflK could
FOB40_18570	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FOB40_18575	COG0142	geranyltranstransferase activity
FOB40_18580	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FOB40_18585	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FOB40_18590	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOB40_18605	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOB40_18620	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOB40_18630	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FOB40_18635	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOB40_18640	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOB40_18645	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FOB40_18650	COG3178	'Phosphotransferase
FOB40_18655	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOB40_18660	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOB40_18665	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOB40_18675	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FOB40_18695	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FOB40_18710	COG4628	conserved protein (DUF2132)
FOB40_18715	COG0688	phosphatidylethanolamine metabolic process
FOB40_18720	COG1162	GTPase activity
FOB40_18725	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FOB40_18765	COG1278	Cold shock
FOB40_18775	COG0840	transmembrane signaling receptor activity
FOB40_18780	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOB40_18785	COG2252	PERMEase
FOB40_18795	COG0488	(ABC) transporter
FOB40_18810	COG0741	lytic transglycosylase activity
FOB40_18820	COG3416	Protein conserved in bacteria
FOB40_18840	COG4608	Belongs to the ABC transporter superfamily
FOB40_18845	COG0444	Belongs to the ABC transporter superfamily
FOB40_18855	COG4239	(ABC) transporter, permease
FOB40_18860	COG4174	ABC transporter (Permease)
FOB40_18875	COG0811	peptide transport
FOB40_18880	COG0811	peptide transport
FOB40_18885	COG0848	biopolymer transport protein
FOB40_18905	COG0616	signal peptide processing
FOB40_18910	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOB40_18910	COG1902	pentaerythritol trinitrate reductase activity
FOB40_18915	COG0778	Nitroreductase
FOB40_18930	COG2264	protein methyltransferase activity
FOB40_18935	COG0604	alcohol dehydrogenase
FOB40_18940	COG0583	DNA-binding transcription factor activity
FOB40_18945	COG2190	(PTS) system
FOB40_18945	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOB40_18945	COG1263	PTS System
FOB40_18950	COG4145	pantothenate transmembrane transporter activity
FOB40_18960	COG0439	Biotin carboxylase
FOB40_18965	COG0511	ligase activity, forming carbon-carbon bonds
FOB40_18970	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FOB40_18975	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOB40_18995	COG3381	protein complex oligomerization
FOB40_19005	COG3005	denitrification pathway
FOB40_19010	COG0745	RESPONSE REGULATOR receiver
FOB40_19020	COG1879	ABC-type sugar transport system periplasmic component
FOB40_19025	COG0784	Response regulator, receiver
FOB40_19025	COG2205	protein histidine kinase activity
FOB40_19025	COG2198	Histidine kinase
FOB40_19035	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FOB40_19040	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FOB40_19045	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOB40_19045	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOB40_19060	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FOB40_19065	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOB40_19070	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FOB40_19075	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FOB40_19100	COG2900	Belongs to the SlyX family
FOB40_19110	COG0545	Peptidyl-prolyl cis-trans isomerase
FOB40_19115	COG2204	response regulator
FOB40_19135	COG0737	Belongs to the 5'-nucleotidase family
FOB40_19140	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FOB40_19145	COG0142	geranyltranstransferase activity
FOB40_19150	COG1722	exodeoxyribonuclease VII activity
FOB40_19155	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOB40_19160	COG1360	Flagellar Motor Protein
FOB40_19165	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOB40_19175	COG1534	Rna-binding protein
FOB40_19180	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FOB40_19185	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOB40_19190	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOB40_19195	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOB40_19200	COG0149	triose-phosphate isomerase activity
FOB40_19205	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOB40_19220	COG0779	Required for maturation of 30S ribosomal subunits
FOB40_19225	COG0195	Participates in both transcription termination and antitermination
FOB40_19230	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FOB40_19235	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FOB40_19240	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOB40_19245	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FOB40_19250	COG1185	polyribonucleotide nucleotidyltransferase activity
FOB40_19255	COG2201	protein-glutamate methylesterase activity
FOB40_19260	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FOB40_19270	COG0840	transmembrane signaling receptor activity
FOB40_19275	COG0835	chemotaxis
FOB40_19285	COG0643	Histidine kinase
FOB40_19285	COG2198	Histidine kinase
FOB40_19315	COG1280	lysine exporter protein (LysE YggA)
FOB40_19320	COG0826	peptidase U32
FOB40_19365	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOB40_19390	COG0300	oxidoreductase activity
FOB40_19400	COG0840	transmembrane signaling receptor activity
FOB40_19430	COG1605	Chorismate mutase
FOB40_19430	COG0077	Prephenate dehydratase
FOB40_19460	COG3272	Protein of unknown function (DUF1722)
FOB40_19465	COG0789	Transcriptional regulator
FOB40_19470	COG0415	Belongs to the DNA photolyase family
FOB40_19480	COG0300	oxidoreductase activity
FOB40_19495	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOB40_19525	COG1477	protein flavinylation
FOB40_19530	COG2871	sodium ion transport
FOB40_19535	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FOB40_19540	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FOB40_19550	COG1805	sodium ion transport
FOB40_19555	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FOB40_19560	COG0271	Belongs to the BolA IbaG family
FOB40_19565	COG2813	Specifically methylates the guanine in position
FOB40_19575	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOB40_19580	COG2211	Major facilitator Superfamily
FOB40_19585	COG3248	Nucleoside-binding outer membrane protein
FOB40_19590	COG1666	GTP binding
FOB40_19595	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOB40_19610	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOB40_19615	COG0840	transmembrane signaling receptor activity
FOB40_19620	COG0583	DNA-binding transcription factor activity
FOB40_19630	COG2363	Small membrane protein
FOB40_19635	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
FOB40_19645	COG0473	3-isopropylmalate dehydrogenase activity
FOB40_19650	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOB40_19655	COG1611	Belongs to the LOG family
FOB40_19660	COG3706	GGDEF domain
FOB40_19670	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FOB40_19670	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FOB40_19680	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
FOB40_19705	COG3098	single-species biofilm formation
FOB40_19710	COG0564	pseudouridine synthase activity
FOB40_19730	COG1263	PTS System
FOB40_19730	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOB40_19740	COG2171	N-acyltransferase activity
FOB40_19750	COG0024	Methionine aminopeptidase
FOB40_19755	COG0052	Belongs to the universal ribosomal protein uS2 family
FOB40_19760	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FOB40_19765	COG0528	UMP kinase activity
FOB40_19770	COG0233	cytoplasmic translational termination
FOB40_19780	COG0575	Belongs to the CDS family
FOB40_19785	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOB40_19790	COG0750	zinc metalloprotease
FOB40_19795	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOB40_19805	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOB40_19810	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOB40_19815	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOB40_19820	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOB40_19825	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FOB40_19835	COG0825	malonyl-CoA metabolic process
FOB40_19845	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOB40_19850	COG1115	amino acid carrier protein
FOB40_19865	COG0714	Associated with various cellular activities
FOB40_19875	COG0583	DNA-binding transcription factor activity
FOB40_19880	COG3104	oligopeptide transport
FOB40_19885	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FOB40_19890	COG1678	Uncharacterized ACR, COG1678
FOB40_19895	COG0189	ligase activity
FOB40_19900	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOB40_19910	COG3091	SprT-like family
FOB40_19920	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOB40_19940	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FOB40_19945	COG0739	heme binding
FOB40_19950	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOB40_19980	COG0814	amino acid
FOB40_20000	COG0531	amino acid
FOB40_20005	COG3710	Transcriptional regulator
FOB40_20015	COG0531	amino acid
FOB40_20020	COG1982	Orn Lys Arg decarboxylase major
FOB40_20025	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FOB40_20035	COG3590	peptidase
FOB40_20045	COG2199	diguanylate cyclase activity
FOB40_20045	COG2203	Gaf domain
FOB40_20080	COG0366	Alpha amylase catalytic
FOB40_20095	COG0463	Glycosyl transferase, family 2
FOB40_20110	COG2989	Protein conserved in bacteria
FOB40_20115	COG3108	Peptidase M15
FOB40_20125	COG2860	membrane
FOB40_20135	COG1196	nuclear chromosome segregation
FOB40_20140	COG3115	cell septum assembly
FOB40_20145	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOB40_20160	COG1328	CTP reductase activity
FOB40_20165	COG0602	queuosine metabolic process
FOB40_20195	COG1566	PFAM secretion protein HlyD family protein
FOB40_20200	COG1846	Transcriptional regulator
FOB40_20215	COG0281	malic enzyme
FOB40_20220	COG3290	protein histidine kinase activity
FOB40_20230	COG0697	spore germination
FOB40_20240	COG1012	belongs to the aldehyde dehydrogenase family
FOB40_20245	COG3284	Transcriptional regulator
FOB40_20250	COG0346	lactoylglutathione lyase activity
FOB40_20255	COG0745	RESPONSE REGULATOR receiver
FOB40_20260	COG5002	protein histidine kinase activity
FOB40_20270	COG4783	chaperone-mediated protein folding
FOB40_20285	COG3142	Participates in the control of copper homeostasis
FOB40_20290	COG0545	Peptidyl-prolyl cis-trans isomerase
FOB40_20315	COG0678	peroxiredoxin activity
FOB40_20325	COG0019	diaminopimelate decarboxylase activity
FOB40_20330	COG1115	amino acid carrier protein
FOB40_20335	COG0095	Lipoate-protein ligase
FOB40_20340	COG2233	PERMEase
FOB40_20345	COG3706	GGDEF domain
FOB40_20355	COG0534	Mate efflux family protein
FOB40_20365	COG0281	malic enzyme
FOB40_20395	COG0531	amino acid
FOB40_20400	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOB40_20405	COG3706	GGDEF domain
FOB40_20410	COG1566	PFAM secretion protein HlyD family protein
FOB40_20420	COG1032	radical SAM domain protein
FOB40_20445	COG0583	DNA-binding transcription factor activity
FOB40_20450	COG0673	inositol 2-dehydrogenase activity
FOB40_20455	COG2920	part of a sulfur-relay system
FOB40_20460	COG1289	transmembrane transporter activity
FOB40_20465	COG0670	Belongs to the BI1 family
FOB40_20480	COG1486	melibiose metabolic process
FOB40_20485	COG1917	Cupin 2, conserved barrel domain protein
FOB40_20485	COG2169	Transcriptional regulator
FOB40_20490	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOB40_20495	COG2723	6-phospho-beta-galactosidase activity
FOB40_20500	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOB40_20505	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOB40_20515	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FOB40_20525	COG3156	type II secretion system protein K
FOB40_20530	COG4795	General secretion pathway protein
FOB40_20535	COG2165	general secretion pathway protein
FOB40_20545	COG2165	general secretion pathway protein
FOB40_20550	COG1459	type II secretion system
FOB40_20555	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOB40_20565	COG3031	protein transport across the cell outer membrane
FOB40_20575	COG3409	Peptidoglycan-binding domain 1 protein
FOB40_20575	COG3267	Type II secretory pathway component ExeA
FOB40_20580	COG2770	Histidine kinase
FOB40_20580	COG3437	response regulator, receiver
FOB40_20595	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOB40_20600	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOB40_20605	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOB40_20615	COG2190	(PTS) system
FOB40_20620	COG3706	GGDEF domain
FOB40_20625	COG3590	peptidase
FOB40_20635	COG1196	nuclear chromosome segregation
FOB40_20635	COG3264	Mechanosensitive ion channel
FOB40_20640	COG0469	pyruvate kinase activity
FOB40_20650	COG3384	dioxygenase
FOB40_20655	COG0419	ATPase involved in DNA repair
FOB40_20660	COG0420	3'-5' exonuclease activity
FOB40_20670	COG2974	May be involved in recombination
FOB40_20685	COG1283	sodium-dependent phosphate transmembrane transporter activity
FOB40_20690	COG0531	amino acid
FOB40_20695	COG0531	amino acid
FOB40_20710	COG1917	Cupin 2, conserved barrel domain protein
FOB40_20710	COG1396	sequence-specific DNA binding
FOB40_20715	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOB40_20745	COG0745	RESPONSE REGULATOR receiver
FOB40_20755	COG3038	cytochrome b561
FOB40_20760	COG1720	tRNA m6t6A37 methyltransferase activity
FOB40_20780	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOB40_20785	COG4988	ABC transporter
FOB40_20800	COG0745	RESPONSE REGULATOR receiver
FOB40_20810	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOB40_20840	COG0798	PFAM Bile acid sodium symporter
FOB40_20850	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOB40_20870	COG1988	membrane-bound metal-dependent
FOB40_20890	COG0159	tryptophan synthase activity
FOB40_20895	COG0133	tryptophan synthase activity
FOB40_20900	COG0134	indole-3-glycerol-phosphate synthase activity
FOB40_20900	COG0135	phosphoribosylanthranilate isomerase activity
FOB40_20905	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOB40_20910	COG0512	Glutamine amidotransferase of anthranilate synthase
FOB40_20910	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOB40_20915	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FOB40_20925	COG0009	L-threonylcarbamoyladenylate synthase
FOB40_20935	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FOB40_20945	COG1946	Acyl-CoA thioesterase
FOB40_20950	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
FOB40_20955	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FOB40_20970	COG0083	homoserine kinase activity
FOB40_20975	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FOB40_20985	COG1943	Transposase
FOB40_21000	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOB40_21020	COG1342	Belongs to the UPF0251 family