locus-tag class description NQU90_00005 PF00308 Bacterial dnaA protein NQU90_00005 PF08299 Bacterial dnaA protein helix-turn-helix NQU90_00005 PF11638 DnaA N-terminal domain NQU90_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NQU90_00010 PF02767 DNA polymerase III beta subunit, central domain NQU90_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NQU90_00015 PF02463 RecF/RecN/SMC N terminal domain NQU90_00020 PF00204 DNA gyrase B NQU90_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NQU90_00020 PF18053 DNA gyrase B subunit insert domain NQU90_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_00020 PF01751 Toprim domain NQU90_00030 PF01965 DJ-1/PfpI family NQU90_00030 PF12833 Helix-turn-helix domain NQU90_00035 PF12706 Beta-lactamase superfamily domain NQU90_00040 PF00011 Hsp20/alpha crystallin family NQU90_00045 PF00011 Hsp20/alpha crystallin family NQU90_00050 PF00155 Aminotransferase class I and II NQU90_00065 PF07690 Major Facilitator Superfamily NQU90_00070 PF00072 Response regulator receiver domain NQU90_00070 PF00486 Transcriptional regulatory protein, C terminal NQU90_00075 PF13493 Domain of unknown function (DUF4118) NQU90_00075 PF13492 GAF domain NQU90_00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_00075 PF00512 His Kinase A (phospho-acceptor) domain NQU90_00075 PF02702 Osmosensitive K+ channel His kinase sensor domain NQU90_00080 PF02669 K+-transporting ATPase, c chain NQU90_00090 PF03814 Potassium-transporting ATPase A subunit NQU90_00095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQU90_00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_00100 PF00512 His Kinase A (phospho-acceptor) domain NQU90_00100 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_00105 PF00873 AcrB/AcrD/AcrF family NQU90_00110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_00115 PF00440 Bacterial regulatory proteins, tetR family NQU90_00150 PF12146 Serine aminopeptidase, S33 NQU90_00155 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_00160 PF00588 SpoU rRNA Methylase family NQU90_00160 PF12105 SpoU, rRNA methylase, C-terminal NQU90_00165 PF02824 TGS domain NQU90_00165 PF04607 Region found in RelA / SpoT proteins NQU90_00165 PF13291 ACT domain NQU90_00170 PF01192 RNA polymerase Rpb6 NQU90_00175 PF00625 Guanylate kinase NQU90_00180 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NQU90_00195 PF00892 EamA-like transporter family NQU90_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_00215 PF03466 LysR substrate binding domain NQU90_00220 PF00579 tRNA synthetases class I (W and Y) NQU90_00225 PF00582 Universal stress protein family NQU90_00230 PF12241 Trans-2-enoyl-CoA reductase catalytic region NQU90_00230 PF07055 Enoyl reductase FAD binding domain NQU90_00230 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NQU90_00235 PF00210 Ferritin-like domain NQU90_00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_00245 PF06580 Histidine kinase NQU90_00245 PF07694 5TMR of 5TMR-LYT NQU90_00250 PF04397 LytTr DNA-binding domain NQU90_00250 PF00072 Response regulator receiver domain NQU90_00255 PF07690 Major Facilitator Superfamily NQU90_00260 PF02222 ATP-grasp domain NQU90_00260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NQU90_00265 PF00731 AIR carboxylase NQU90_00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_00280 PF03466 LysR substrate binding domain NQU90_00285 PF07715 TonB-dependent Receptor Plug Domain NQU90_00285 PF00593 TonB dependent receptor NQU90_00290 PF01177 Asp/Glu/Hydantoin racemase NQU90_00320 PF00899 ThiF family NQU90_00325 PF02657 Fe-S metabolism associated domain NQU90_00330 PF00266 Aminotransferase class-V NQU90_00335 PF00580 UvrD/REP helicase N-terminal domain NQU90_00335 PF13361 UvrD-like helicase C-terminal domain NQU90_00340 PF00563 EAL domain NQU90_00340 PF00990 Diguanylate cyclase, GGDEF domain NQU90_00340 PF03707 Bacterial signalling protein N terminal repeat NQU90_00345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NQU90_00350 PF08240 Alcohol dehydrogenase GroES-like domain NQU90_00350 PF00107 Zinc-binding dehydrogenase NQU90_00355 PF00155 Aminotransferase class I and II NQU90_00360 PF08360 QacR-like protein, C-terminal region NQU90_00360 PF00440 Bacterial regulatory proteins, tetR family NQU90_00365 PF01370 NAD dependent epimerase/dehydratase family NQU90_00380 PF00535 Glycosyl transferase family 2 NQU90_00405 PF12833 Helix-turn-helix domain NQU90_00405 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NQU90_00410 PF01810 LysE type translocator NQU90_00440 PF14001 YdfZ protein NQU90_00455 PF13286 Phosphohydrolase-associated domain NQU90_00455 PF01966 HD domain NQU90_00460 PF00580 UvrD/REP helicase N-terminal domain NQU90_00460 PF13361 UvrD-like helicase C-terminal domain NQU90_00475 PF02608 ABC transporter substrate-binding protein PnrA-like NQU90_00480 PF00005 ABC transporter NQU90_00485 PF02653 Branched-chain amino acid transport system / permease component NQU90_00490 PF02653 Branched-chain amino acid transport system / permease component NQU90_00495 PF00571 CBS domain NQU90_00495 PF03448 MgtE intracellular N domain NQU90_00495 PF01769 Divalent cation transporter NQU90_00500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQU90_00500 PF14824 Sirohaem biosynthesis protein central NQU90_00500 PF10414 Sirohaem synthase dimerisation region NQU90_00505 PF01226 Formate/nitrite transporter NQU90_00510 PF13806 Rieske-like [2Fe-2S] domain NQU90_00515 PF04324 BFD-like [2Fe-2S] binding domain NQU90_00515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NQU90_00515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NQU90_00515 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_00515 PF18267 Rubredoxin NAD+ reductase C-terminal domain NQU90_00530 PF00005 ABC transporter NQU90_00535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_00550 PF00004 ATPase family associated with various cellular activities (AAA) NQU90_00550 PF07724 AAA domain (Cdc48 subfamily) NQU90_00550 PF10431 C-terminal, D2-small domain, of ClpB protein NQU90_00555 PF00227 Proteasome subunit NQU90_00565 PF03485 Arginyl tRNA synthetase N terminal domain NQU90_00565 PF05746 DALR anticodon binding domain NQU90_00565 PF00750 tRNA synthetases class I (R) NQU90_00575 PF04542 Sigma-70 region 2 NQU90_00575 PF04545 Sigma-70, region 4 NQU90_00585 PF02673 Bacitracin resistance protein BacA NQU90_00590 PF01263 Aldose 1-epimerase NQU90_00595 PF00288 GHMP kinases N terminal domain NQU90_00595 PF10509 Galactokinase galactose-binding signature NQU90_00595 PF08544 GHMP kinases C terminal NQU90_00600 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NQU90_00600 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NQU90_00605 PF16363 GDP-mannose 4,6 dehydratase NQU90_00610 PF00356 Bacterial regulatory proteins, lacI family NQU90_00615 PF02929 Beta galactosidase small chain NQU90_00615 PF16353 Domain of unknown function(DUF4981) NQU90_00615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NQU90_00615 PF02837 Glycosyl hydrolases family 2, sugar binding domain NQU90_00615 PF00703 Glycosyl hydrolases family 2 NQU90_00620 PF13407 Periplasmic binding protein domain NQU90_00625 PF00005 ABC transporter NQU90_00630 PF02653 Branched-chain amino acid transport system / permease component NQU90_00635 PF02743 Cache domain NQU90_00635 PF00672 HAMP domain NQU90_00635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_00640 PF05958 tRNA (Uracil-5-)-methyltransferase NQU90_00675 PF09940 Domain of unknown function (DUF2172) NQU90_00675 PF16254 Domain of unknown function (DUF4910) NQU90_00675 PF16221 winged helix-turn-helix NQU90_00685 PF00128 Alpha amylase, catalytic domain NQU90_00685 PF02903 Alpha amylase, N-terminal ig-like domain NQU90_00700 PF00012 Hsp70 protein NQU90_00705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQU90_00705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQU90_00710 PF05981 CreA protein NQU90_00725 PF01258 Prokaryotic dksA/traR C4-type zinc finger NQU90_00730 PF00120 Glutamine synthetase, catalytic domain NQU90_00735 PF00202 Aminotransferase class-III NQU90_00740 PF13416 Bacterial extracellular solute-binding protein NQU90_00745 PF13416 Bacterial extracellular solute-binding protein NQU90_00750 PF08402 TOBE domain NQU90_00750 PF00005 ABC transporter NQU90_00755 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_00760 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_00765 PF03475 3-alpha domain NQU90_00765 PF03473 MOSC domain NQU90_00780 PF03061 Thioesterase superfamily NQU90_00785 PF00270 DEAD/DEAH box helicase NQU90_00785 PF00271 Helicase conserved C-terminal domain NQU90_00785 PF00570 HRDC domain NQU90_00785 PF16124 RecQ zinc-binding NQU90_00785 PF09382 RQC domain NQU90_00790 PF00034 Cytochrome c NQU90_00795 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NQU90_00805 PF02592 Putative vitamin uptake transporter NQU90_00810 PF03737 Aldolase/RraA NQU90_00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_00815 PF00672 HAMP domain NQU90_00825 PF01197 Ribosomal protein L31 NQU90_00830 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NQU90_00830 PF18074 Primosomal protein N C-terminal domain NQU90_00830 PF17764 3′ DNA-binding domain (3′BD) NQU90_00830 PF00271 Helicase conserved C-terminal domain NQU90_00830 PF00270 DEAD/DEAH box helicase NQU90_00840 PF13460 NAD(P)H-binding NQU90_00840 PF11066 Protein of unknown function (DUF2867) NQU90_00845 PF03222 Tryptophan/tyrosine permease family NQU90_00850 PF03949 Malic enzyme, NAD binding domain NQU90_00850 PF00390 Malic enzyme, N-terminal domain NQU90_00855 PF03631 Virulence factor BrkB NQU90_00860 PF02580 D-Tyr-tRNA(Tyr) deacylase NQU90_00865 PF17284 Spermidine synthase tetramerisation domain NQU90_00870 PF00583 Acetyltransferase (GNAT) family NQU90_00870 PF09500 Putative thioesterase (yiiD_Cterm) NQU90_00880 PF00270 DEAD/DEAH box helicase NQU90_00880 PF00271 Helicase conserved C-terminal domain NQU90_00880 PF17191 RecG wedge domain NQU90_00885 PF13091 PLD-like domain NQU90_00890 PF02447 GntP family permease NQU90_00895 PF01202 Shikimate kinase NQU90_00900 PF00920 Dehydratase family NQU90_00905 PF01081 KDPG and KHG aldolase NQU90_00910 PF00356 Bacterial regulatory proteins, lacI family NQU90_00910 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NQU90_00920 PF01551 Peptidase family M23 NQU90_00925 PF01676 Metalloenzyme superfamily NQU90_00925 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NQU90_00930 PF00581 Rhodanese-like domain NQU90_00935 PF02556 Preprotein translocase subunit SecB NQU90_00940 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NQU90_00940 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NQU90_00945 PF01106 NifU-like domain NQU90_00945 PF01521 Iron-sulphur cluster biosynthesis NQU90_00950 PF00156 Phosphoribosyl transferase domain NQU90_00955 PF00561 alpha/beta hydrolase fold NQU90_00975 PF17674 HHH domain NQU90_00975 PF00575 S1 RNA binding domain NQU90_00975 PF09371 Tex-like protein N-terminal domain NQU90_00975 PF16921 Tex protein YqgF-like domain NQU90_00980 PF01272 Transcription elongation factor, GreA/GreB, C-term NQU90_00980 PF03449 Transcription elongation factor, N-terminal NQU90_00985 PF00486 Transcriptional regulatory protein, C terminal NQU90_00985 PF00072 Response regulator receiver domain NQU90_00990 PF00512 His Kinase A (phospho-acceptor) domain NQU90_00990 PF00672 HAMP domain NQU90_00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_01000 PF00338 Ribosomal protein S10p/S20e NQU90_01005 PF00297 Ribosomal protein L3 NQU90_01010 PF00573 Ribosomal protein L4/L1 family NQU90_01015 PF00276 Ribosomal protein L23 NQU90_01020 PF00181 Ribosomal Proteins L2, RNA binding domain NQU90_01020 PF03947 Ribosomal Proteins L2, C-terminal domain NQU90_01025 PF00203 Ribosomal protein S19 NQU90_01030 PF00237 Ribosomal protein L22p/L17e NQU90_01035 PF00189 Ribosomal protein S3, C-terminal domain NQU90_01035 PF07650 KH domain NQU90_01040 PF00252 Ribosomal protein L16p/L10e NQU90_01045 PF00831 Ribosomal L29 protein NQU90_01050 PF00366 Ribosomal protein S17 NQU90_01055 PF00238 Ribosomal protein L14p/L23e NQU90_01060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NQU90_01060 PF00467 KOW motif NQU90_01065 PF00673 ribosomal L5P family C-terminus NQU90_01065 PF00281 Ribosomal protein L5 NQU90_01070 PF00253 Ribosomal protein S14p/S29e NQU90_01075 PF00410 Ribosomal protein S8 NQU90_01080 PF00347 Ribosomal protein L6 NQU90_01085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NQU90_01090 PF03719 Ribosomal protein S5, C-terminal domain NQU90_01090 PF00333 Ribosomal protein S5, N-terminal domain NQU90_01095 PF00327 Ribosomal protein L30p/L7e NQU90_01100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NQU90_01105 PF00344 SecY translocase NQU90_01110 PF00444 Ribosomal protein L36 NQU90_01115 PF00416 Ribosomal protein S13/S18 NQU90_01120 PF00411 Ribosomal protein S11 NQU90_01125 PF00163 Ribosomal protein S4/S9 N-terminal domain NQU90_01125 PF01479 S4 domain NQU90_01130 PF01000 RNA polymerase Rpb3/RpoA insert domain NQU90_01130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NQU90_01130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NQU90_01135 PF01196 Ribosomal protein L17 NQU90_01170 PF07715 TonB-dependent Receptor Plug Domain NQU90_01170 PF00593 TonB dependent receptor NQU90_01175 PF00990 Diguanylate cyclase, GGDEF domain NQU90_01175 PF17151 Periplasmic sensor domain NQU90_01180 PF00512 His Kinase A (phospho-acceptor) domain NQU90_01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_01180 PF00672 HAMP domain NQU90_01185 PF00072 Response regulator receiver domain NQU90_01185 PF00486 Transcriptional regulatory protein, C terminal NQU90_01195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_01195 PF00672 HAMP domain NQU90_01195 PF02743 Cache domain NQU90_01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_01205 PF03466 LysR substrate binding domain NQU90_01215 PF02678 Pirin NQU90_01215 PF17954 Quercetinase C-terminal cupin domain NQU90_01220 PF07681 DoxX NQU90_01225 PF17946 RecC C-terminal domain NQU90_01230 PF00580 UvrD/REP helicase N-terminal domain NQU90_01230 PF13361 UvrD-like helicase C-terminal domain NQU90_01230 PF12705 PD-(D/E)XK nuclease superfamily NQU90_01235 PF13538 UvrD-like helicase C-terminal domain NQU90_01240 PF01609 Transposase DDE domain NQU90_01240 PF05598 Transposase domain (DUF772) NQU90_01250 PF00392 Bacterial regulatory proteins, gntR family NQU90_01250 PF07702 UTRA domain NQU90_01265 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_01275 PF00005 ABC transporter NQU90_01275 PF08402 TOBE domain NQU90_01285 PF00990 Diguanylate cyclase, GGDEF domain NQU90_01305 PF01053 Cys/Met metabolism PLP-dependent enzyme NQU90_01315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_01315 PF12793 Sugar transport-related sRNA regulator N-term NQU90_01320 PF00141 Peroxidase NQU90_01335 PF03280 Proteobacterial lipase chaperone protein NQU90_01340 PF00561 alpha/beta hydrolase fold NQU90_01345 PF00579 tRNA synthetases class I (W and Y) NQU90_01345 PF01479 S4 domain NQU90_01350 PF00196 Bacterial regulatory proteins, luxR family NQU90_01370 PF13673 Acetyltransferase (GNAT) domain NQU90_01370 PF04229 GrpB protein NQU90_01375 PF00199 Catalase NQU90_01375 PF06628 Catalase-related immune-responsive NQU90_01380 PF00583 Acetyltransferase (GNAT) family NQU90_01400 PF08264 Anticodon-binding domain of tRNA NQU90_01400 PF00133 tRNA synthetases class I (I, L, M and V) NQU90_01400 PF10458 Valyl tRNA synthetase tRNA binding arm NQU90_01405 PF04364 DNA polymerase III chi subunit, HolC NQU90_01410 PF00883 Cytosol aminopeptidase family, catalytic domain NQU90_01410 PF02789 Cytosol aminopeptidase family, N-terminal domain NQU90_01415 PF03739 Lipopolysaccharide export system permease LptF/LptG NQU90_01420 PF03739 Lipopolysaccharide export system permease LptF/LptG NQU90_01490 PF07715 TonB-dependent Receptor Plug Domain NQU90_01490 PF00593 TonB dependent receptor NQU90_01500 PF00768 D-alanyl-D-alanine carboxypeptidase NQU90_01505 PF13520 Amino acid permease NQU90_01525 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NQU90_01540 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NQU90_01545 PF02602 Uroporphyrinogen-III synthase HemD NQU90_01550 PF03900 Porphobilinogen deaminase, C-terminal domain NQU90_01550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NQU90_01555 PF12633 Adenylate cyclase NT domain NQU90_01555 PF01295 Adenylate cyclase, class-I NQU90_01560 PF02230 Phospholipase/Carboxylesterase NQU90_01565 PF01491 Frataxin-like domain NQU90_01575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NQU90_01575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NQU90_01580 PF01678 Diaminopimelate epimerase NQU90_01590 PF02899 Phage integrase, N-terminal SAM-like domain NQU90_01590 PF00589 Phage integrase family NQU90_01595 PF13419 Haloacid dehalogenase-like hydrolase NQU90_01605 PF00027 Cyclic nucleotide-binding domain NQU90_01605 PF13545 Crp-like helix-turn-helix domain NQU90_01615 PF07722 Peptidase C26 NQU90_01620 PF04751 Protein of unknown function (DUF615) NQU90_01625 PF01523 Putative modulator of DNA gyrase NQU90_01630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NQU90_01635 PF01722 BolA-like protein NQU90_01645 PF05494 MlaC protein NQU90_01650 PF02470 MlaD protein NQU90_01655 PF02405 Permease MlaE NQU90_01660 PF00005 ABC transporter NQU90_01665 PF00571 CBS domain NQU90_01665 PF01380 SIS domain NQU90_01675 PF06835 Lipopolysaccharide-assembly, LptC-related NQU90_01680 PF03968 OstA-like protein NQU90_01685 PF00005 ABC transporter NQU90_01685 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQU90_01690 PF00309 Sigma-54 factor, Activator interacting domain (AID) NQU90_01690 PF04963 Sigma-54 factor, core binding domain NQU90_01690 PF04552 Sigma-54, DNA binding domain NQU90_01695 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NQU90_01700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NQU90_01705 PF03668 P-loop ATPase protein family NQU90_01710 PF00381 PTS HPr component phosphorylation site NQU90_01715 PF13180 PDZ domain NQU90_01720 PF00595 PDZ domain NQU90_01720 PF13180 PDZ domain NQU90_01730 PF03969 AFG1-like ATPase NQU90_01735 PF00572 Ribosomal protein L13 NQU90_01740 PF00380 Ribosomal protein S9/S16 NQU90_01745 PF00355 Rieske [2Fe-2S] domain NQU90_01745 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NQU90_01750 PF00032 Cytochrome b(C-terminal)/b6/petD NQU90_01750 PF00033 Cytochrome b/b6/petB NQU90_01755 PF02167 Cytochrome C1 family NQU90_01760 PF00043 Glutathione S-transferase, C-terminal domain NQU90_01760 PF02798 Glutathione S-transferase, N-terminal domain NQU90_01765 PF04386 Stringent starvation protein B NQU90_01770 PF04972 BON domain NQU90_01775 PF13580 SIS domain NQU90_01780 PF02021 Uncharacterised protein family UPF0102 NQU90_01785 PF04348 LppC putative lipoprotein NQU90_01790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQU90_01800 PF02381 MraZ protein, putative antitoxin-like NQU90_01805 PF01795 MraW methylase family NQU90_01810 PF04999 Cell division protein FtsL NQU90_01815 PF03717 Penicillin-binding Protein dimerisation domain NQU90_01815 PF00905 Penicillin binding protein transpeptidase domain NQU90_01820 PF01225 Mur ligase family, catalytic domain NQU90_01820 PF02875 Mur ligase family, glutamate ligase domain NQU90_01820 PF08245 Mur ligase middle domain NQU90_01825 PF01225 Mur ligase family, catalytic domain NQU90_01825 PF02875 Mur ligase family, glutamate ligase domain NQU90_01825 PF08245 Mur ligase middle domain NQU90_01830 PF00953 Glycosyl transferase family 4 NQU90_01830 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NQU90_01835 PF02875 Mur ligase family, glutamate ligase domain NQU90_01835 PF08245 Mur ligase middle domain NQU90_01840 PF01098 Cell cycle protein NQU90_01845 PF04101 Glycosyltransferase family 28 C-terminal domain NQU90_01845 PF03033 Glycosyltransferase family 28 N-terminal domain NQU90_01850 PF01225 Mur ligase family, catalytic domain NQU90_01850 PF08245 Mur ligase middle domain NQU90_01850 PF02875 Mur ligase family, glutamate ligase domain NQU90_01855 PF08478 POTRA domain, FtsQ-type NQU90_01855 PF03799 Cell division protein FtsQ NQU90_01860 PF02491 SHS2 domain inserted in FTSA NQU90_01865 PF12327 FtsZ family, C-terminal domain NQU90_01865 PF00091 Tubulin/FtsZ family, GTPase domain NQU90_01870 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NQU90_01880 PF07516 SecA Wing and Scaffold domain NQU90_01880 PF02810 SEC-C motif NQU90_01880 PF01043 SecA preprotein cross-linking domain NQU90_01880 PF07517 SecA DEAD-like domain NQU90_01885 PF00293 NUDIX domain NQU90_01890 PF03884 DNA gyrase inhibitor YacG NQU90_01895 PF07072 Cell division protein NQU90_01900 PF01121 Dephospho-CoA kinase NQU90_01905 PF06750 Bacterial Peptidase A24 N-terminal domain NQU90_01905 PF01478 Type IV leader peptidase family NQU90_01910 PF00482 Type II secretion system (T2SS), protein F NQU90_01915 PF00437 Type II/IV secretion system protein NQU90_01915 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NQU90_01920 PF07963 Prokaryotic N-terminal methylation motif NQU90_01925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NQU90_01925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NQU90_01935 PF01510 N-acetylmuramoyl-L-alanine amidase NQU90_01940 PF00392 Bacterial regulatory proteins, gntR family NQU90_01940 PF07729 FCD domain NQU90_01945 PF17831 Pyruvate dehydrogenase E1 component middle domain NQU90_01945 PF00456 Transketolase, thiamine diphosphate binding domain NQU90_01950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NQU90_01950 PF00364 Biotin-requiring enzyme NQU90_01950 PF02817 e3 binding domain NQU90_01955 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_01955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQU90_01960 PF00990 Diguanylate cyclase, GGDEF domain NQU90_01960 PF03707 Bacterial signalling protein N terminal repeat NQU90_01960 PF00563 EAL domain NQU90_01965 PF12729 Four helix bundle sensory module for signal transduction NQU90_01965 PF00672 HAMP domain NQU90_01965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_01970 PF01734 Patatin-like phospholipase NQU90_01975 PF00330 Aconitase family (aconitate hydratase) NQU90_01975 PF06434 Aconitate hydratase 2 N-terminus NQU90_01975 PF11791 Aconitate B N-terminal domain NQU90_01980 PF12792 CSS motif domain associated with EAL NQU90_01980 PF00563 EAL domain NQU90_01990 PF07683 Cobalamin synthesis protein cobW C-terminal domain NQU90_01990 PF02492 CobW/HypB/UreG, nucleotide-binding domain NQU90_01995 PF00873 AcrB/AcrD/AcrF family NQU90_02010 PF07690 Major Facilitator Superfamily NQU90_02020 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NQU90_02025 PF02152 Dihydroneopterin aldolase NQU90_02030 PF02660 Glycerol-3-phosphate acyltransferase NQU90_02055 PF07670 Nucleoside recognition NQU90_02075 PF14698 Argininosuccinate lyase C-terminal NQU90_02075 PF00206 Lyase NQU90_02080 PF00764 Arginosuccinate synthase NQU90_02085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NQU90_02085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NQU90_02090 PF00696 Amino acid kinase family NQU90_02095 PF02774 Semialdehyde dehydrogenase, dimerisation domain NQU90_02095 PF01118 Semialdehyde dehydrogenase, NAD binding domain NQU90_02100 PF07687 Peptidase dimerisation domain NQU90_02100 PF01546 Peptidase family M20/M25/M40 NQU90_02105 PF00311 Phosphoenolpyruvate carboxylase NQU90_02110 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_02120 PF00990 Diguanylate cyclase, GGDEF domain NQU90_02120 PF17151 Periplasmic sensor domain NQU90_02130 PF06055 Exopolysaccharide synthesis, ExoD NQU90_02140 PF00990 Diguanylate cyclase, GGDEF domain NQU90_02145 PF00909 Ammonium Transporter Family NQU90_02150 PF05433 Glycine zipper 2TM domain NQU90_02155 PF00583 Acetyltransferase (GNAT) family NQU90_02160 PF11756 Nitrous oxide-stimulated promoter NQU90_02165 PF01321 Creatinase/Prolidase N-terminal domain NQU90_02165 PF00557 Metallopeptidase family M24 NQU90_02170 PF00392 Bacterial regulatory proteins, gntR family NQU90_02175 PF01293 Phosphoenolpyruvate carboxykinase NQU90_02180 PF01430 Hsp33 protein NQU90_02185 PF01479 S4 domain NQU90_02195 PF01569 PAP2 superfamily NQU90_02200 PF01594 AI-2E family transporter NQU90_02205 PF00158 Sigma-54 interaction domain NQU90_02205 PF02954 Bacterial regulatory protein, Fis family NQU90_02205 PF00989 PAS fold NQU90_02210 PF00465 Iron-containing alcohol dehydrogenase NQU90_02215 PF03610 PTS system fructose IIA component NQU90_02215 PF05524 PEP-utilising enzyme, N-terminal NQU90_02215 PF00391 PEP-utilising enzyme, mobile domain NQU90_02215 PF00381 PTS HPr component phosphorylation site NQU90_02220 PF02734 DAK2 domain NQU90_02225 PF02733 Dak1 domain NQU90_02230 PF00860 Permease family NQU90_02235 PF00313 'Cold-shock' DNA-binding domain NQU90_02245 PF01545 Cation efflux family NQU90_02245 PF16916 Dimerisation domain of Zinc Transporter NQU90_02260 PF05598 Transposase domain (DUF772) NQU90_02260 PF01609 Transposase DDE domain NQU90_02265 PF03466 LysR substrate binding domain NQU90_02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_02270 PF11975 Family 4 glycosyl hydrolase C-terminal domain NQU90_02270 PF02056 Family 4 glycosyl hydrolase NQU90_02275 PF01965 DJ-1/PfpI family NQU90_02280 PF12706 Beta-lactamase superfamily domain NQU90_02290 PF05598 Transposase domain (DUF772) NQU90_02290 PF01609 Transposase DDE domain NQU90_02305 PF01420 Type I restriction modification DNA specificity domain NQU90_02315 PF02899 Phage integrase, N-terminal SAM-like domain NQU90_02315 PF00589 Phage integrase family NQU90_02320 PF00436 Single-strand binding protein family NQU90_02325 PF00005 ABC transporter NQU90_02325 PF17755 UvrA DNA-binding domain NQU90_02325 PF17760 UvrA interaction domain NQU90_02330 PF00990 Diguanylate cyclase, GGDEF domain NQU90_02340 PF03922 OmpW family NQU90_02345 PF00672 HAMP domain NQU90_02345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_02360 PF02219 Methylenetetrahydrofolate reductase NQU90_02370 PF03594 Benzoate membrane transport protein NQU90_02375 PF01381 Helix-turn-helix NQU90_02375 PF07883 Cupin domain NQU90_02415 PF04363 Protein of unknown function (DUF496) NQU90_02435 PF00994 Probable molybdopterin binding domain NQU90_02435 PF02464 Competence-damaged protein NQU90_02445 PF04204 Homoserine O-succinyltransferase NQU90_02455 PF01037 Lrp/AsnC ligand binding domain NQU90_02460 PF00884 Sulfatase NQU90_02495 PF00106 short chain dehydrogenase NQU90_02500 PF03577 Peptidase family C69 NQU90_02510 PF00465 Iron-containing alcohol dehydrogenase NQU90_02515 PF02142 MGS-like domain NQU90_02520 PF00210 Ferritin-like domain NQU90_02535 PF08351 Domain of unknown function (DUF1726) NQU90_02535 PF13718 GNAT acetyltransferase 2 NQU90_02535 PF05127 Helicase NQU90_02535 PF17176 tRNA-binding domain NQU90_02540 PF00106 short chain dehydrogenase NQU90_02545 PF01584 CheW-like domain NQU90_02545 PF00072 Response regulator receiver domain NQU90_02555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NQU90_02555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NQU90_02560 PF02698 DUF218 domain NQU90_02565 PF01752 Collagenase NQU90_02565 PF08453 Peptidase family M9 N-terminal NQU90_02570 PF00501 AMP-binding enzyme NQU90_02575 PF13378 Enolase C-terminal domain-like NQU90_02580 PF00378 Enoyl-CoA hydratase/isomerase NQU90_02585 PF12697 Alpha/beta hydrolase family NQU90_02590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQU90_02590 PF16582 Middle domain of thiamine pyrophosphate NQU90_02590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NQU90_02595 PF00425 chorismate binding enzyme NQU90_02600 PF01040 UbiA prenyltransferase family NQU90_02620 PF00270 DEAD/DEAH box helicase NQU90_02620 PF00271 Helicase conserved C-terminal domain NQU90_02620 PF03880 DbpA RNA binding domain NQU90_02625 PF07670 Nucleoside recognition NQU90_02625 PF07662 Na+ dependent nucleoside transporter C-terminus NQU90_02625 PF01773 Na+ dependent nucleoside transporter N-terminus NQU90_02630 PF04307 LexA-binding, inner membrane-associated putative hydrolase NQU90_02635 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NQU90_02640 PF01544 CorA-like Mg2+ transporter protein NQU90_02655 PF00226 DnaJ domain NQU90_02655 PF01556 DnaJ C terminal domain NQU90_02655 PF00684 DnaJ central domain NQU90_02660 PF00999 Sodium/hydrogen exchanger family NQU90_02660 PF03471 Transporter associated domain NQU90_02660 PF02080 TrkA-C domain NQU90_02665 PF05068 Mannitol repressor NQU90_02670 PF01232 Mannitol dehydrogenase Rossmann domain NQU90_02670 PF08125 Mannitol dehydrogenase C-terminal domain NQU90_02675 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NQU90_02675 PF02378 Phosphotransferase system, EIIC NQU90_02675 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NQU90_02680 PF03279 Bacterial lipid A biosynthesis acyltransferase NQU90_02685 PF00294 pfkB family carbohydrate kinase NQU90_02685 PF01467 Cytidylyltransferase-like NQU90_02690 PF02321 Outer membrane efflux protein NQU90_02695 PF00293 NUDIX domain NQU90_02700 PF06853 Protein of unknown function (DUF1249) NQU90_02705 PF00149 Calcineurin-like phosphoesterase NQU90_02710 PF05728 Uncharacterised protein family (UPF0227) NQU90_02715 PF00293 NUDIX domain NQU90_02720 PF07869 Protein of unknown function (DUF1656) NQU90_02725 PF00529 HlyD membrane-fusion protein of T1SS NQU90_02725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_02730 PF04632 Fusaric acid resistance protein family NQU90_02735 PF01751 Toprim domain NQU90_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_02735 PF00986 DNA gyrase B subunit, carboxyl terminus NQU90_02735 PF00204 DNA gyrase B NQU90_02740 PF03989 DNA gyrase C-terminal domain, beta-propeller NQU90_02740 PF00521 DNA gyrase/topoisomerase IV, subunit A NQU90_02755 PF00854 POT family NQU90_02775 PF01556 DnaJ C terminal domain NQU90_02775 PF00226 DnaJ domain NQU90_02775 PF00684 DnaJ central domain NQU90_02785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NQU90_02785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NQU90_02790 PF03466 LysR substrate binding domain NQU90_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_02795 PF00578 AhpC/TSA family NQU90_02815 PF01553 Acyltransferase NQU90_02820 PF04012 PspA/IM30 family NQU90_02835 PF01541 GIY-YIG catalytic domain NQU90_02845 PF00892 EamA-like transporter family NQU90_02850 PF03167 Uracil DNA glycosylase superfamily NQU90_02855 PF00892 EamA-like transporter family NQU90_02860 PF03466 LysR substrate binding domain NQU90_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_02865 PF00950 ABC 3 transport family NQU90_02870 PF00005 ABC transporter NQU90_02875 PF01297 Zinc-uptake complex component A periplasmic NQU90_02895 PF01551 Peptidase family M23 NQU90_02895 PF01476 LysM domain NQU90_02895 PF08525 Opacity-associated protein A N-terminal motif NQU90_02900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQU90_02905 PF04222 Protein of unknown function (DUF416) NQU90_02920 PF02028 BCCT, betaine/carnitine/choline family transporter NQU90_02925 PF01966 HD domain NQU90_02925 PF12627 Probable RNA and SrmB- binding site of polymerase A NQU90_02925 PF01743 Poly A polymerase head domain NQU90_02930 PF00730 HhH-GPD superfamily base excision DNA repair protein NQU90_02930 PF14815 NUDIX domain NQU90_02930 PF10576 Iron-sulfur binding domain of endonuclease III NQU90_02930 PF00633 Helix-hairpin-helix motif NQU90_02935 PF04362 Bacterial Fe(2+) trafficking NQU90_02940 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NQU90_02940 PF01464 Transglycosylase SLT domain NQU90_02945 PF04076 Bacterial OB fold (BOF) protein NQU90_02950 PF00657 GDSL-like Lipase/Acylhydrolase NQU90_02955 PF00691 OmpA family NQU90_02955 PF01389 OmpA-like transmembrane domain NQU90_02960 PF00990 Diguanylate cyclase, GGDEF domain NQU90_02965 PF17876 Cold shock domain NQU90_02965 PF08206 Ribonuclease B OB domain NQU90_02965 PF00773 RNB domain NQU90_02965 PF00575 S1 RNA binding domain NQU90_02965 PF08461 Ribonuclease R winged-helix domain NQU90_02975 PF00588 SpoU rRNA Methylase family NQU90_02975 PF08032 RNA 2'-O ribose methyltransferase substrate binding NQU90_02985 PF13673 Acetyltransferase (GNAT) domain NQU90_02990 PF00270 DEAD/DEAH box helicase NQU90_02990 PF00271 Helicase conserved C-terminal domain NQU90_02995 PF05175 Methyltransferase small domain NQU90_03000 PF05525 Branched-chain amino acid transport protein NQU90_03005 PF05525 Branched-chain amino acid transport protein NQU90_03020 PF01475 Ferric uptake regulator family NQU90_03025 PF01207 Dihydrouridine synthase (Dus) NQU90_03035 PF00106 short chain dehydrogenase NQU90_03050 PF00378 Enoyl-CoA hydratase/isomerase NQU90_03055 PF10952 Protein of unknown function (DUF2753) NQU90_03060 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_03070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_03080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_03080 PF08447 PAS fold NQU90_03085 PF01609 Transposase DDE domain NQU90_03085 PF13006 Insertion element 4 transposase N-terminal NQU90_03090 PF04073 Aminoacyl-tRNA editing domain NQU90_03090 PF03129 Anticodon binding domain NQU90_03090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQU90_03095 PF01938 TRAM domain NQU90_03095 PF05958 tRNA (Uracil-5-)-methyltransferase NQU90_03100 PF02610 L-arabinose isomerase NQU90_03100 PF11762 L-arabinose isomerase C-terminal domain NQU90_03105 PF00596 Class II Aldolase and Adducin N-terminal domain NQU90_03110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQU90_03115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NQU90_03120 PF00005 ABC transporter NQU90_03125 PF02653 Branched-chain amino acid transport system / permease component NQU90_03130 PF12833 Helix-turn-helix domain NQU90_03130 PF02311 AraC-like ligand binding domain NQU90_03140 PF02470 MlaD protein NQU90_03145 PF04403 Paraquat-inducible protein A NQU90_03150 PF17209 Hfq protein NQU90_03155 PF13419 Haloacid dehalogenase-like hydrolase NQU90_03165 PF00360 Phytochrome region NQU90_03165 PF00563 EAL domain NQU90_03165 PF01590 GAF domain NQU90_03165 PF00990 Diguanylate cyclase, GGDEF domain NQU90_03170 PF00773 RNB domain NQU90_03170 PF08206 Ribonuclease B OB domain NQU90_03170 PF17876 Cold shock domain NQU90_03175 PF03466 LysR substrate binding domain NQU90_03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_03180 PF00765 Autoinducer synthase NQU90_03185 PF03472 Autoinducer binding domain NQU90_03185 PF00196 Bacterial regulatory proteins, luxR family NQU90_03190 PF01810 LysE type translocator NQU90_03195 PF00672 HAMP domain NQU90_03195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_03200 PF07499 RuvA, C-terminal domain NQU90_03200 PF01330 RuvA N terminal domain NQU90_03205 PF17864 RuvB AAA lid domain NQU90_03205 PF05491 RuvB C-terminal winged helix domain NQU90_03205 PF05496 Holliday junction DNA helicase RuvB P-loop domain NQU90_03210 PF01654 Cytochrome bd terminal oxidase subunit I NQU90_03215 PF02322 Cytochrome bd terminal oxidase subunit II NQU90_03220 PF08173 Membrane bound YbgT-like protein NQU90_03225 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NQU90_03230 PF03061 Thioesterase superfamily NQU90_03235 PF01618 MotA/TolQ/ExbB proton channel family NQU90_03240 PF02472 Biopolymer transport protein ExbD/TolR NQU90_03250 PF04052 TolB amino-terminal domain NQU90_03250 PF07676 WD40-like Beta Propeller Repeat NQU90_03255 PF00691 OmpA family NQU90_03260 PF13174 Tetratricopeptide repeat NQU90_03260 PF16331 TolA binding protein trimerisation NQU90_03325 PF00209 Sodium:neurotransmitter symporter family NQU90_03335 PF00209 Sodium:neurotransmitter symporter family NQU90_03355 PF07690 Major Facilitator Superfamily NQU90_03365 PF01037 Lrp/AsnC ligand binding domain NQU90_03380 PF13344 Haloacid dehalogenase-like hydrolase NQU90_03380 PF00293 NUDIX domain NQU90_03390 PF01641 SelR domain NQU90_03395 PF00128 Alpha amylase, catalytic domain NQU90_03395 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NQU90_03400 PF00128 Alpha amylase, catalytic domain NQU90_03400 PF02806 Alpha amylase, C-terminal all-beta domain NQU90_03400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NQU90_03405 PF02446 4-alpha-glucanotransferase NQU90_03410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NQU90_03410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NQU90_03415 PF01263 Aldose 1-epimerase NQU90_03420 PF02445 Quinolinate synthetase A protein NQU90_03425 PF00672 HAMP domain NQU90_03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_03430 PF01957 NfeD-like C-terminal, partner-binding NQU90_03435 PF16200 C-terminal region of band_7 NQU90_03435 PF01145 SPFH domain / Band 7 family NQU90_03440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQU90_03440 PF14824 Sirohaem biosynthesis protein central NQU90_03440 PF10414 Sirohaem synthase dimerisation region NQU90_03445 PF01507 Phosphoadenosine phosphosulfate reductase family NQU90_03450 PF00009 Elongation factor Tu GTP binding domain NQU90_03455 PF03600 Citrate transporter NQU90_03455 PF02080 TrkA-C domain NQU90_03475 PF08447 PAS fold NQU90_03475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_03495 PF00005 ABC transporter NQU90_03510 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NQU90_03525 PF00719 Inorganic pyrophosphatase NQU90_03530 PF11849 Domain of unknown function (DUF3369) NQU90_03540 PF00893 Small Multidrug Resistance protein NQU90_03545 PF00893 Small Multidrug Resistance protein NQU90_03550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQU90_03555 PF14814 Bifunctional transglycosylase second domain NQU90_03555 PF00905 Penicillin binding protein transpeptidase domain NQU90_03555 PF00912 Transglycosylase NQU90_03560 PF00271 Helicase conserved C-terminal domain NQU90_03560 PF08482 ATP-dependent helicase C-terminal NQU90_03560 PF00270 DEAD/DEAH box helicase NQU90_03560 PF04408 Helicase associated domain (HA2) NQU90_03570 PF17746 SfsA N-terminal OB domain NQU90_03570 PF03749 Sugar fermentation stimulation protein RE domain NQU90_03575 PF01258 Prokaryotic dksA/traR C4-type zinc finger NQU90_03580 PF00749 tRNA synthetases class I (E and Q), catalytic domain NQU90_03585 PF01743 Poly A polymerase head domain NQU90_03585 PF12626 Polymerase A arginine-rich C-terminus NQU90_03585 PF12627 Probable RNA and SrmB- binding site of polymerase A NQU90_03590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NQU90_03595 PF02548 Ketopantoate hydroxymethyltransferase NQU90_03600 PF02569 Pantoate-beta-alanine ligase NQU90_03610 PF00375 Sodium:dicarboxylate symporter family NQU90_03630 PF01869 BadF/BadG/BcrA/BcrD ATPase family NQU90_03635 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component NQU90_03640 PF01061 ABC-2 type transporter NQU90_03645 PF00005 ABC transporter NQU90_03650 PF00156 Phosphoribosyl transferase domain NQU90_03655 PF00440 Bacterial regulatory proteins, tetR family NQU90_03660 PF02441 Flavoprotein NQU90_03665 PF01225 Mur ligase family, catalytic domain NQU90_03665 PF02875 Mur ligase family, glutamate ligase domain NQU90_03665 PF08245 Mur ligase middle domain NQU90_03670 PF01569 PAP2 superfamily NQU90_03675 PF16363 GDP-mannose 4,6 dehydratase NQU90_03680 PF00970 Oxidoreductase FAD-binding domain NQU90_03680 PF00042 Globin NQU90_03680 PF00175 Oxidoreductase NAD-binding domain NQU90_03685 PF03063 Prismane/CO dehydrogenase family NQU90_03690 PF00210 Ferritin-like domain NQU90_03695 PF01510 N-acetylmuramoyl-L-alanine amidase NQU90_03700 PF07308 Protein of unknown function (DUF1456) NQU90_03705 PF00672 HAMP domain NQU90_03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_03705 PF00512 His Kinase A (phospho-acceptor) domain NQU90_03705 PF01627 Hpt domain NQU90_03705 PF00072 Response regulator receiver domain NQU90_03705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NQU90_03710 PF05958 tRNA (Uracil-5-)-methyltransferase NQU90_03710 PF01938 TRAM domain NQU90_03715 PF04607 Region found in RelA / SpoT proteins NQU90_03715 PF02824 TGS domain NQU90_03715 PF13291 ACT domain NQU90_03720 PF03819 MazG nucleotide pyrophosphohydrolase domain NQU90_03725 PF06418 CTP synthase N-terminus NQU90_03725 PF00117 Glutamine amidotransferase class-I NQU90_03730 PF03952 Enolase, N-terminal domain NQU90_03730 PF00113 Enolase, C-terminal TIM barrel domain NQU90_03775 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NQU90_03785 PF12848 ABC transporter NQU90_03785 PF00005 ABC transporter NQU90_03805 PF00392 Bacterial regulatory proteins, gntR family NQU90_03805 PF00155 Aminotransferase class I and II NQU90_03815 PF01810 LysE type translocator NQU90_03820 PF01177 Asp/Glu/Hydantoin racemase NQU90_03830 PF04074 YhcH/YjgK/YiaL NQU90_03835 PF00871 Acetokinase family NQU90_03840 PF00924 Mechanosensitive ion channel NQU90_03845 PF17969 L,D-transpeptidase C-terminal domain NQU90_03845 PF03734 L,D-transpeptidase catalytic domain NQU90_03855 PF00474 Sodium:solute symporter family NQU90_03860 PF04977 Septum formation initiator NQU90_03865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NQU90_03870 PF02542 YgbB family NQU90_03875 PF01142 tRNA pseudouridine synthase D (TruD) NQU90_03880 PF01975 Survival protein SurE NQU90_03890 PF09335 SNARE associated Golgi protein NQU90_03895 PF01551 Peptidase family M23 NQU90_03895 PF01476 LysM domain NQU90_03900 PF00140 Sigma-70 factor, region 1.2 NQU90_03900 PF04545 Sigma-70, region 4 NQU90_03900 PF04542 Sigma-70 region 2 NQU90_03900 PF04539 Sigma-70 region 3 NQU90_03905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NQU90_03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_03915 PF03466 LysR substrate binding domain NQU90_03920 PF04371 Porphyromonas-type peptidyl-arginine deiminase NQU90_03925 PF01425 Amidase NQU90_03935 PF00753 Metallo-beta-lactamase superfamily NQU90_03945 PF00270 DEAD/DEAH box helicase NQU90_03945 PF00271 Helicase conserved C-terminal domain NQU90_03955 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase NQU90_03965 PF00445 Ribonuclease T2 family NQU90_03970 PF03060 Nitronate monooxygenase NQU90_04000 PF00293 NUDIX domain NQU90_04000 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NQU90_04000 PF09297 NADH pyrophosphatase zinc ribbon domain NQU90_04015 PF00072 Response regulator receiver domain NQU90_04015 PF00486 Transcriptional regulatory protein, C terminal NQU90_04035 PF08335 GlnD PII-uridylyltransferase NQU90_04035 PF03710 Glutamate-ammonia ligase adenylyltransferase NQU90_04040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_04040 PF00672 HAMP domain NQU90_04045 PF00520 Ion transport protein NQU90_04045 PF00027 Cyclic nucleotide-binding domain NQU90_04050 PF08239 Bacterial SH3 domain NQU90_04055 PF00171 Aldehyde dehydrogenase family NQU90_04055 PF14850 DNA-binding domain of Proline dehydrogenase NQU90_04055 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NQU90_04055 PF01619 Proline dehydrogenase NQU90_04060 PF00293 NUDIX domain NQU90_04060 PF09297 NADH pyrophosphatase zinc ribbon domain NQU90_04065 PF01208 Uroporphyrinogen decarboxylase (URO-D) NQU90_04070 PF00480 ROK family NQU90_04075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NQU90_04075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NQU90_04080 PF00162 Phosphoglycerate kinase NQU90_04085 PF01116 Fructose-bisphosphate aldolase class-II NQU90_04090 PF01266 FAD dependent oxidoreductase NQU90_04110 PF11412 Disulphide bond corrector protein DsbC NQU90_04110 PF02683 Cytochrome C biogenesis protein transmembrane region NQU90_04115 PF03091 CutA1 divalent ion tolerance protein NQU90_04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_04130 PF03466 LysR substrate binding domain NQU90_04135 PF01571 Aminomethyltransferase folate-binding domain NQU90_04140 PF03937 Flavinator of succinate dehydrogenase NQU90_04150 PF00890 FAD binding domain NQU90_04150 PF02910 Fumarate reductase flavoprotein C-term NQU90_04155 PF08281 Sigma-70, region 4 NQU90_04155 PF04542 Sigma-70 region 2 NQU90_04160 PF03873 Anti sigma-E protein RseA, C-terminal domain NQU90_04160 PF03872 Anti sigma-E protein RseA, N-terminal domain NQU90_04165 PF03888 MucB/RseB N-terminal domain NQU90_04165 PF17188 MucB/RseB C-terminal domain NQU90_04175 PF00679 Elongation factor G C-terminus NQU90_04175 PF00009 Elongation factor Tu GTP binding domain NQU90_04175 PF03144 Elongation factor Tu domain 2 NQU90_04175 PF06421 GTP-binding protein LepA C-terminus NQU90_04180 PF10502 Signal peptidase, peptidase S26 NQU90_04185 PF00035 Double-stranded RNA binding motif NQU90_04185 PF14622 Ribonuclease-III-like NQU90_04190 PF07650 KH domain NQU90_04190 PF01926 50S ribosome-binding GTPase NQU90_04195 PF11967 Recombination protein O N terminal NQU90_04195 PF02565 Recombination protein O C terminal NQU90_04200 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NQU90_04205 PF00459 Inositol monophosphatase family NQU90_04210 PF03795 YCII-related domain NQU90_04215 PF04279 Intracellular septation protein A NQU90_04220 PF00282 Pyridoxal-dependent decarboxylase conserved domain NQU90_04225 PF03006 Haemolysin-III related NQU90_04230 PF06826 Predicted Permease Membrane Region NQU90_04230 PF02080 TrkA-C domain NQU90_04250 PF00563 EAL domain NQU90_04250 PF00990 Diguanylate cyclase, GGDEF domain NQU90_04250 PF03707 Bacterial signalling protein N terminal repeat NQU90_04255 PF06877 Regulator of ribonuclease activity B NQU90_04280 PF00561 alpha/beta hydrolase fold NQU90_04285 PF00194 Eukaryotic-type carbonic anhydrase NQU90_04290 PF04227 Indigoidine synthase A like protein NQU90_04295 PF00294 pfkB family carbohydrate kinase NQU90_04310 PF00582 Universal stress protein family NQU90_04320 PF00267 Gram-negative porin NQU90_04325 PF08241 Methyltransferase domain NQU90_04330 PF00027 Cyclic nucleotide-binding domain NQU90_04330 PF13545 Crp-like helix-turn-helix domain NQU90_04335 PF02566 OsmC-like protein NQU90_04350 PF00485 Phosphoribulokinase / Uridine kinase family NQU90_04355 PF06794 Uncharacterised protein family (UPF0270) NQU90_04365 PF01590 GAF domain NQU90_04365 PF00990 Diguanylate cyclase, GGDEF domain NQU90_04365 PF00360 Phytochrome region NQU90_04365 PF00563 EAL domain NQU90_04370 PF00561 alpha/beta hydrolase fold NQU90_04375 PF01584 CheW-like domain NQU90_04375 PF00072 Response regulator receiver domain NQU90_04385 PF09526 Probable metal-binding protein (DUF2387) NQU90_04390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NQU90_04400 PF00772 DnaB-like helicase N terminal domain NQU90_04400 PF03796 DnaB-like helicase C terminal domain NQU90_04405 PF00842 Alanine racemase, C-terminal domain NQU90_04405 PF01168 Alanine racemase, N-terminal domain NQU90_04410 PF01894 Uncharacterised protein family UPF0047 NQU90_04415 PF03575 Peptidase family S51 NQU90_04425 PF00005 ABC transporter NQU90_04430 PF01032 FecCD transport family NQU90_04440 PF06228 Haem utilisation ChuX/HutX NQU90_04445 PF01243 Pyridoxamine 5'-phosphate oxidase NQU90_04465 PF07715 TonB-dependent Receptor Plug Domain NQU90_04465 PF00593 TonB dependent receptor NQU90_04470 PF12832 MFS_1 like family NQU90_04480 PF13443 Cro/C1-type HTH DNA-binding domain NQU90_04490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_04490 PF00512 His Kinase A (phospho-acceptor) domain NQU90_04490 PF00672 HAMP domain NQU90_04490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NQU90_04490 PF00072 Response regulator receiver domain NQU90_04490 PF01627 Hpt domain NQU90_04495 PF00704 Glycosyl hydrolases family 18 NQU90_04495 PF08329 Chitinase A, N-terminal domain NQU90_04500 PF08448 PAS fold NQU90_04500 PF00990 Diguanylate cyclase, GGDEF domain NQU90_04505 PF00704 Glycosyl hydrolases family 18 NQU90_04505 PF08329 Chitinase A, N-terminal domain NQU90_04510 PF17945 Beta/Gamma crystallin NQU90_04510 PF12561 ToxR activated gene A lipoprotein domain NQU90_04515 PF18416 N-acetylglucosamine binding protein domain 2 NQU90_04515 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NQU90_04550 PF00704 Glycosyl hydrolases family 18 NQU90_04550 PF06483 Chitinase C NQU90_04555 PF00072 Response regulator receiver domain NQU90_04555 PF01584 CheW-like domain NQU90_04560 PF13472 GDSL-like Lipase/Acylhydrolase family NQU90_04565 PF00005 ABC transporter NQU90_04575 PF08338 Domain of unknown function (DUF1731) NQU90_04575 PF01370 NAD dependent epimerase/dehydratase family NQU90_04580 PF00563 EAL domain NQU90_04580 PF12792 CSS motif domain associated with EAL NQU90_04585 PF00155 Aminotransferase class I and II NQU90_04590 PF02390 Putative methyltransferase NQU90_04595 PF04320 Protein with unknown function (DUF469) NQU90_04600 PF04960 Glutaminase NQU90_04605 PF00581 Rhodanese-like domain NQU90_04610 PF06004 Bacterial protein of unknown function (DUF903) NQU90_04620 PF00994 Probable molybdopterin binding domain NQU90_04630 PF06738 Putative threonine/serine exporter NQU90_04635 PF12821 Threonine/Serine exporter, ThrE NQU90_04640 PF00186 Dihydrofolate reductase NQU90_04645 PF01507 Phosphoadenosine phosphosulfate reductase family NQU90_04650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NQU90_04650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NQU90_04655 PF00258 Flavodoxin NQU90_04655 PF00667 FAD binding domain NQU90_04655 PF00175 Oxidoreductase NAD-binding domain NQU90_04660 PF02567 Phenazine biosynthesis-like protein NQU90_04665 PF01336 OB-fold nucleic acid binding domain NQU90_04665 PF00152 tRNA synthetases class II (D, K and N) NQU90_04675 PF00672 HAMP domain NQU90_04675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_04675 PF02743 Cache domain NQU90_04680 PF03616 Sodium/glutamate symporter NQU90_04685 PF17763 Glutaminase/Asparaginase C-terminal domain NQU90_04685 PF00710 Asparaginase, N-terminal NQU90_04690 PF07023 Protein of unknown function (DUF1315) NQU90_04695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NQU90_04695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NQU90_04710 PF04055 Radical SAM superfamily NQU90_04710 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NQU90_04715 PF03099 Biotin/lipoate A/B protein ligase family NQU90_04720 PF04359 Protein of unknown function (DUF493) NQU90_04725 PF07943 Penicillin-binding protein 5, C-terminal domain NQU90_04725 PF00768 D-alanyl-D-alanine carboxypeptidase NQU90_04730 PF05036 Sporulation related domain NQU90_04730 PF03330 Lytic transglycolase NQU90_04735 PF13406 Transglycosylase SLT domain NQU90_04740 PF01098 Cell cycle protein NQU90_04745 PF00905 Penicillin binding protein transpeptidase domain NQU90_04745 PF03717 Penicillin-binding Protein dimerisation domain NQU90_04750 PF02590 Predicted SPOUT methyltransferase NQU90_04760 PF01467 Cytidylyltransferase-like NQU90_04775 PF08264 Anticodon-binding domain of tRNA NQU90_04775 PF00133 tRNA synthetases class I (I, L, M and V) NQU90_04775 PF13603 Leucyl-tRNA synthetase, Domain 2 NQU90_04780 PF07295 Zinc-ribbon containing domain NQU90_04790 PF01523 Putative modulator of DNA gyrase NQU90_04795 PF01523 Putative modulator of DNA gyrase NQU90_04800 PF00258 Flavodoxin NQU90_04805 PF00589 Phage integrase family NQU90_04805 PF02899 Phage integrase, N-terminal SAM-like domain NQU90_04810 PF01741 Large-conductance mechanosensitive channel, MscL NQU90_04820 PF17768 RecJ OB domain NQU90_04820 PF02272 DHHA1 domain NQU90_04820 PF01368 DHH family NQU90_04830 PF00795 Carbon-nitrogen hydrolase NQU90_04835 PF00571 CBS domain NQU90_04835 PF03471 Transporter associated domain NQU90_04840 PF02130 Uncharacterized protein family UPF0054 NQU90_04845 PF02562 PhoH-like protein NQU90_04850 PF04055 Radical SAM superfamily NQU90_04850 PF01938 TRAM domain NQU90_04850 PF00919 Uncharacterized protein family UPF0004 NQU90_04855 PF01494 FAD binding domain NQU90_04860 PF00857 Isochorismatase family NQU90_04865 PF00313 'Cold-shock' DNA-binding domain NQU90_04870 PF05230 MASE2 domain NQU90_04870 PF00990 Diguanylate cyclase, GGDEF domain NQU90_04875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_04875 PF03466 LysR substrate binding domain NQU90_04885 PF13419 Haloacid dehalogenase-like hydrolase NQU90_04895 PF00563 EAL domain NQU90_04895 PF00990 Diguanylate cyclase, GGDEF domain NQU90_04895 PF05231 MASE1 NQU90_04895 PF08447 PAS fold NQU90_04895 PF13426 PAS domain NQU90_04895 PF08448 PAS fold NQU90_04905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQU90_04905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQU90_04915 PF09285 Elongation factor P, C-terminal NQU90_04915 PF01132 Elongation factor P (EF-P) OB domain NQU90_04915 PF08207 Elongation factor P (EF-P) KOW-like domain NQU90_04925 PF00478 IMP dehydrogenase / GMP reductase domain NQU90_04935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_04935 PF00512 His Kinase A (phospho-acceptor) domain NQU90_04935 PF08521 Two-component sensor kinase N-terminal NQU90_04940 PF00072 Response regulator receiver domain NQU90_04940 PF00486 Transcriptional regulatory protein, C terminal NQU90_04950 PF00106 short chain dehydrogenase NQU90_04960 PF00501 AMP-binding enzyme NQU90_04975 PF01266 FAD dependent oxidoreductase NQU90_04985 PF00440 Bacterial regulatory proteins, tetR family NQU90_04985 PF17932 Tetracyclin repressor-like, C-terminal domain NQU90_04990 PF06224 Winged helix DNA-binding domain NQU90_05000 PF01546 Peptidase family M20/M25/M40 NQU90_05000 PF07687 Peptidase dimerisation domain NQU90_05005 PF07670 Nucleoside recognition NQU90_05010 PF07670 Nucleoside recognition NQU90_05015 PF02313 Fumarate reductase subunit D NQU90_05020 PF02300 Fumarate reductase subunit C NQU90_05025 PF13085 2Fe-2S iron-sulfur cluster binding domain NQU90_05025 PF13183 4Fe-4S dicluster domain NQU90_05030 PF00890 FAD binding domain NQU90_05030 PF02910 Fumarate reductase flavoprotein C-term NQU90_05035 PF00672 HAMP domain NQU90_05035 PF02743 Cache domain NQU90_05035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_05040 PF03009 Glycerophosphoryl diester phosphodiesterase family NQU90_05045 PF00924 Mechanosensitive ion channel NQU90_05045 PF12795 Mechanosensitive ion channel porin domain NQU90_05045 PF12794 Mechanosensitive ion channel inner membrane domain 1 NQU90_05055 PF01551 Peptidase family M23 NQU90_05055 PF08525 Opacity-associated protein A N-terminal motif NQU90_05055 PF01476 LysM domain NQU90_05065 PF03466 LysR substrate binding domain NQU90_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_05080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_05080 PF02743 Cache domain NQU90_05080 PF00672 HAMP domain NQU90_05085 PF03466 LysR substrate binding domain NQU90_05085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_05090 PF00905 Penicillin binding protein transpeptidase domain NQU90_05090 PF00912 Transglycosylase NQU90_05090 PF17092 Penicillin-binding protein OB-like domain NQU90_05095 PF11104 Type IV pilus assembly protein PilM; NQU90_05115 PF07660 Secretin and TonB N terminus short domain NQU90_05115 PF03958 Bacterial type II/III secretion system short domain NQU90_05115 PF00263 Bacterial type II and III secretion system protein NQU90_05115 PF11741 AMIN domain NQU90_05120 PF01202 Shikimate kinase NQU90_05125 PF01761 3-dehydroquinate synthase NQU90_05135 PF02086 D12 class N6 adenine-specific DNA methyltransferase NQU90_05140 PF00834 Ribulose-phosphate 3 epimerase family NQU90_05145 PF13419 Haloacid dehalogenase-like hydrolase NQU90_05150 PF00579 tRNA synthetases class I (W and Y) NQU90_05160 PF00117 Glutamine amidotransferase class-I NQU90_05165 PF00202 Aminotransferase class-III NQU90_05170 PF04958 Arginine N-succinyltransferase beta subunit NQU90_05175 PF00171 Aldehyde dehydrogenase family NQU90_05190 PF13419 Haloacid dehalogenase-like hydrolase NQU90_05195 PF07690 Major Facilitator Superfamily NQU90_05200 PF10371 Domain of unknown function NQU90_05200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQU90_05200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQU90_05200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQU90_05200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQU90_05205 PF11941 Domain of unknown function (DUF3459) NQU90_05205 PF00128 Alpha amylase, catalytic domain NQU90_05215 PF04266 ASCH domain NQU90_05225 PF01048 Phosphorylase superfamily NQU90_05230 PF04973 Nicotinamide mononucleotide transporter NQU90_05285 PF10509 Galactokinase galactose-binding signature NQU90_05285 PF08544 GHMP kinases C terminal NQU90_05285 PF00288 GHMP kinases N terminal domain NQU90_05290 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NQU90_05290 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NQU90_05295 PF16363 GDP-mannose 4,6 dehydratase NQU90_05300 PF00356 Bacterial regulatory proteins, lacI family NQU90_05305 PF02264 LamB porin NQU90_05310 PF07148 Maltose operon periplasmic protein precursor (MalM) NQU90_05320 PF00672 HAMP domain NQU90_05320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_05320 PF02743 Cache domain NQU90_05325 PF00005 ABC transporter NQU90_05325 PF17912 MalK OB fold domain NQU90_05330 PF13416 Bacterial extracellular solute-binding protein NQU90_05335 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_05340 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_05345 PF07745 Glycosyl hydrolase family 53 NQU90_05350 PF08532 Beta-galactosidase trimerisation domain NQU90_05350 PF08533 Beta-galactosidase C-terminal domain NQU90_05350 PF02449 Beta-galactosidase NQU90_05355 PF02378 Phosphotransferase system, EIIC NQU90_05355 PF00367 phosphotransferase system, EIIB NQU90_05360 PF07745 Glycosyl hydrolase family 53 NQU90_05365 PF02887 Pyruvate kinase, alpha/beta domain NQU90_05365 PF00224 Pyruvate kinase, barrel domain NQU90_05370 PF00817 impB/mucB/samB family NQU90_05370 PF13438 Domain of unknown function (DUF4113) NQU90_05370 PF11799 impB/mucB/samB family C-terminal domain NQU90_05375 PF02321 Outer membrane efflux protein NQU90_05380 PF00873 AcrB/AcrD/AcrF family NQU90_05385 PF00529 HlyD membrane-fusion protein of T1SS NQU90_05385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_05390 PF01609 Transposase DDE domain NQU90_05390 PF05598 Transposase domain (DUF772) NQU90_05430 PF00717 Peptidase S24-like NQU90_05435 PF05598 Transposase domain (DUF772) NQU90_05435 PF01609 Transposase DDE domain NQU90_05480 PF09588 YqaJ-like viral recombinase domain NQU90_05490 PF01926 50S ribosome-binding GTPase NQU90_05490 PF06071 Protein of unknown function (DUF933) NQU90_05495 PF01195 Peptidyl-tRNA hydrolase NQU90_05500 PF02872 5'-nucleotidase, C-terminal domain NQU90_05500 PF00149 Calcineurin-like phosphoesterase NQU90_05505 PF14572 Phosphoribosyl synthetase-associated domain NQU90_05505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NQU90_05515 PF08544 GHMP kinases C terminal NQU90_05515 PF00288 GHMP kinases N terminal domain NQU90_05520 PF03550 Outer membrane lipoprotein LolB NQU90_05525 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NQU90_05525 PF01488 Shikimate / quinate 5-dehydrogenase NQU90_05525 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NQU90_05530 PF03462 PCRF domain NQU90_05530 PF00472 RF-1 domain NQU90_05535 PF17827 PrmC N-terminal domain NQU90_05535 PF13847 Methyltransferase domain NQU90_05545 PF13369 Transglutaminase-like superfamily NQU90_05550 PF00793 DAHP synthetase I family NQU90_05555 PF01228 Glycine radical NQU90_05565 PF03167 Uracil DNA glycosylase superfamily NQU90_05580 PF01161 Phosphatidylethanolamine-binding protein NQU90_05585 PF00709 Adenylosuccinate synthetase NQU90_05600 PF00155 Aminotransferase class I and II NQU90_05605 PF07690 Major Facilitator Superfamily NQU90_05610 PF03466 LysR substrate binding domain NQU90_05610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_05615 PF00106 short chain dehydrogenase NQU90_05620 PF08496 Peptidase family S49 N-terminal NQU90_05620 PF01343 Peptidase family S49 NQU90_05625 PF07690 Major Facilitator Superfamily NQU90_05630 PF03707 Bacterial signalling protein N terminal repeat NQU90_05630 PF00990 Diguanylate cyclase, GGDEF domain NQU90_05630 PF00563 EAL domain NQU90_05635 PF02635 DsrE/DsrF-like family NQU90_05645 PF12838 4Fe-4S dicluster domain NQU90_05650 PF01136 Peptidase family U32 NQU90_05650 PF16325 Peptidase family U32 C-terminal domain NQU90_05655 PF00004 ATPase family associated with various cellular activities (AAA) NQU90_05675 PF00816 H-NS histone family NQU90_05695 PF00916 Sulfate permease family NQU90_05695 PF01740 STAS domain NQU90_05705 PF00196 Bacterial regulatory proteins, luxR family NQU90_05705 PF00072 Response regulator receiver domain NQU90_05710 PF00990 Diguanylate cyclase, GGDEF domain NQU90_05710 PF05231 MASE1 NQU90_05710 PF13426 PAS domain NQU90_05710 PF00563 EAL domain NQU90_05710 PF08448 PAS fold NQU90_05710 PF08447 PAS fold NQU90_05720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_05720 PF00672 HAMP domain NQU90_05725 PF01609 Transposase DDE domain NQU90_05725 PF05598 Transposase domain (DUF772) NQU90_05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_05730 PF03466 LysR substrate binding domain NQU90_05735 PF03601 Conserved hypothetical protein 698 NQU90_05745 PF00196 Bacterial regulatory proteins, luxR family NQU90_05745 PF00072 Response regulator receiver domain NQU90_05750 PF01590 GAF domain NQU90_05750 PF00158 Sigma-54 interaction domain NQU90_05755 PF00258 Flavodoxin NQU90_05755 PF00753 Metallo-beta-lactamase superfamily NQU90_05755 PF00301 Rubredoxin NQU90_05760 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_05760 PF18113 Rubredoxin binding C-terminal domain NQU90_05775 PF00196 Bacterial regulatory proteins, luxR family NQU90_05775 PF00072 Response regulator receiver domain NQU90_05785 PF07690 Major Facilitator Superfamily NQU90_05790 PF00384 Molybdopterin oxidoreductase NQU90_05790 PF01568 Molydopterin dinucleotide binding domain NQU90_05790 PF14710 Respiratory nitrate reductase alpha N-terminal NQU90_05795 PF13247 4Fe-4S dicluster domain NQU90_05795 PF14711 Respiratory nitrate reductase beta C-terminal NQU90_05800 PF02613 Nitrate reductase delta subunit NQU90_05805 PF02665 Nitrate reductase gamma subunit NQU90_05820 PF08859 DGC domain NQU90_05845 PF01814 Hemerythrin HHE cation binding domain NQU90_05845 PF04405 Domain of Unknown function (DUF542) NQU90_05850 PF00158 Sigma-54 interaction domain NQU90_05850 PF02954 Bacterial regulatory protein, Fis family NQU90_05890 PF01548 Transposase NQU90_05890 PF02371 Transposase IS116/IS110/IS902 family NQU90_05935 PF04996 Succinylarginine dihydrolase NQU90_05940 PF01396 Topoisomerase DNA binding C4 zinc finger NQU90_05940 PF01751 Toprim domain NQU90_05940 PF01131 DNA topoisomerase NQU90_05940 PF08272 Topoisomerase I zinc-ribbon-like NQU90_05955 PF08447 PAS fold NQU90_05955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_05960 PF00728 Glycosyl hydrolase family 20, catalytic domain NQU90_05960 PF02838 Glycosyl hydrolase family 20, domain 2 NQU90_05965 PF01869 BadF/BadG/BcrA/BcrD ATPase family NQU90_05975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQU90_05975 PF00005 ABC transporter NQU90_05980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQU90_05980 PF00005 ABC transporter NQU90_05985 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_05985 PF12911 N-terminal TM domain of oligopeptide transport permease C NQU90_05990 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_05995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_06000 PF00072 Response regulator receiver domain NQU90_06000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_06000 PF09308 LuxQ, periplasmic NQU90_06000 PF00512 His Kinase A (phospho-acceptor) domain NQU90_06020 PF10725 Protein of unknown function (DUF2517) NQU90_06030 PF05114 Protein of unknown function (DUF692) NQU90_06055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_06055 PF08447 PAS fold NQU90_06055 PF13426 PAS domain NQU90_06065 PF04632 Fusaric acid resistance protein family NQU90_06070 PF00994 Probable molybdopterin binding domain NQU90_06070 PF03454 MoeA C-terminal region (domain IV) NQU90_06070 PF03453 MoeA N-terminal region (domain I and II) NQU90_06075 PF12804 MobA-like NTP transferase domain NQU90_06080 PF00005 ABC transporter NQU90_06085 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_06090 PF12849 PBP superfamily domain NQU90_06095 PF00158 Sigma-54 interaction domain NQU90_06095 PF02954 Bacterial regulatory protein, Fis family NQU90_06095 PF00072 Response regulator receiver domain NQU90_06100 PF00989 PAS fold NQU90_06100 PF00512 His Kinase A (phospho-acceptor) domain NQU90_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_06110 PF02634 FdhD/NarQ family NQU90_06140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NQU90_06140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQU90_06140 PF00384 Molybdopterin oxidoreductase NQU90_06140 PF01568 Molydopterin dinucleotide binding domain NQU90_06140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NQU90_06140 PF12838 4Fe-4S dicluster domain NQU90_06140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQU90_06140 PF00384 Molybdopterin oxidoreductase NQU90_06140 PF01568 Molydopterin dinucleotide binding domain NQU90_06140 PF12838 4Fe-4S dicluster domain NQU90_06145 PF13247 4Fe-4S dicluster domain NQU90_06165 PF00390 Malic enzyme, N-terminal domain NQU90_06165 PF03949 Malic enzyme, NAD binding domain NQU90_06170 PF16998 17 kDa outer membrane surface antigen NQU90_06170 PF05433 Glycine zipper 2TM domain NQU90_06180 PF00860 Permease family NQU90_06185 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_06190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_06190 PF00672 HAMP domain NQU90_06220 PF01418 Helix-turn-helix domain, rpiR family NQU90_06220 PF01380 SIS domain NQU90_06225 PF00224 Pyruvate kinase, barrel domain NQU90_06225 PF02887 Pyruvate kinase, alpha/beta domain NQU90_06235 PF07969 Amidohydrolase family NQU90_06245 PF02049 Flagellar hook-basal body complex protein FliE NQU90_06250 PF01514 Secretory protein of YscJ/FliF family NQU90_06250 PF08345 Flagellar M-ring protein C-terminal NQU90_06255 PF01706 FliG C-terminal domain NQU90_06255 PF14841 FliG middle domain NQU90_06255 PF14842 FliG N-terminal domain NQU90_06265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQU90_06265 PF18269 T3SS EscN ATPase C-terminal domain NQU90_06285 PF02154 Flagellar motor switch protein FliM NQU90_06285 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NQU90_06290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NQU90_06295 PF04347 Flagellar biosynthesis protein, FliO NQU90_06300 PF00813 FliP family NQU90_06305 PF01313 Bacterial export proteins, family 3 NQU90_06310 PF01311 Bacterial export proteins, family 1 NQU90_06315 PF01312 FlhB HrpN YscU SpaS Family NQU90_06320 PF00771 FHIPEP family NQU90_06325 PF00448 SRP54-type protein, GTPase domain NQU90_06330 PF10609 NUBPL iron-transfer P-loop NTPase NQU90_06335 PF04545 Sigma-70, region 4 NQU90_06335 PF04542 Sigma-70 region 2 NQU90_06335 PF04539 Sigma-70 region 3 NQU90_06340 PF00072 Response regulator receiver domain NQU90_06345 PF04344 Chemotaxis phosphatase, CheZ NQU90_06350 PF00072 Response regulator receiver domain NQU90_06350 PF01584 CheW-like domain NQU90_06350 PF02895 Signal transducing histidine kinase, homodimeric domain NQU90_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_06350 PF01627 Hpt domain NQU90_06355 PF01339 CheB methylesterase NQU90_06355 PF00072 Response regulator receiver domain NQU90_06360 PF01618 MotA/TolQ/ExbB proton channel family NQU90_06365 PF00691 OmpA family NQU90_06365 PF13677 Membrane MotB of proton-channel complex MotA/MotB NQU90_06370 PF13614 AAA domain NQU90_06380 PF01584 CheW-like domain NQU90_06390 PF00005 ABC transporter NQU90_06395 PF03379 CcmB protein NQU90_06400 PF01578 Cytochrome C assembly protein NQU90_06405 PF04995 Heme exporter protein D (CcmD) NQU90_06410 PF03100 CcmE NQU90_06415 PF01578 Cytochrome C assembly protein NQU90_06415 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NQU90_06420 PF08534 Redoxin NQU90_06425 PF03918 Cytochrome C biogenesis protein NQU90_06435 PF04333 MlaA lipoprotein NQU90_06440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NQU90_06440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NQU90_06445 PF00462 Glutaredoxin NQU90_06450 PF00291 Pyridoxal-phosphate dependent enzyme NQU90_06455 PF03222 Tryptophan/tyrosine permease family NQU90_06460 PF00871 Acetokinase family NQU90_06465 PF02901 Pyruvate formate lyase-like NQU90_06465 PF01228 Glycine radical NQU90_06470 PF01042 Endoribonuclease L-PSP NQU90_06475 PF01189 16S rRNA methyltransferase RsmB/F NQU90_06475 PF01029 NusB family NQU90_06480 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NQU90_06480 PF01243 Pyridoxamine 5'-phosphate oxidase NQU90_06485 PF13417 Glutathione S-transferase, N-terminal domain NQU90_06505 PF08007 Cupin superfamily protein NQU90_06510 PF08328 Adenylosuccinate lyase C-terminal NQU90_06510 PF00206 Lyase NQU90_06515 PF04356 Protein of unknown function (DUF489) NQU90_06525 PF00293 NUDIX domain NQU90_06530 PF00849 RNA pseudouridylate synthase NQU90_06540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NQU90_06545 PF07690 Major Facilitator Superfamily NQU90_06550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NQU90_06550 PF02378 Phosphotransferase system, EIIC NQU90_06550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NQU90_06575 PF00210 Ferritin-like domain NQU90_06595 PF01048 Phosphorylase superfamily NQU90_06620 PF04055 Radical SAM superfamily NQU90_06620 PF18693 TRAM domain NQU90_06620 PF00919 Uncharacterized protein family UPF0004 NQU90_06635 PF01695 IstB-like ATP binding protein NQU90_06640 PF02796 Helix-turn-helix domain of resolvase NQU90_06640 PF00665 Integrase core domain NQU90_06645 PF09722 Protein of unknown function (DUF2384) NQU90_06650 PF05598 Transposase domain (DUF772) NQU90_06650 PF01609 Transposase DDE domain NQU90_06675 PF00072 Response regulator receiver domain NQU90_06690 PF02001 Protein of unknown function DUF134 NQU90_06705 PF08361 MAATS-type transcriptional repressor, C-terminal region NQU90_06705 PF00440 Bacterial regulatory proteins, tetR family NQU90_06710 PF00529 HlyD membrane-fusion protein of T1SS NQU90_06710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_06715 PF00873 AcrB/AcrD/AcrF family NQU90_06720 PF16363 GDP-mannose 4,6 dehydratase NQU90_06725 PF04321 RmlD substrate binding domain NQU90_06730 PF00483 Nucleotidyl transferase NQU90_06735 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NQU90_06740 PF05523 WxcM-like, C-terminal NQU90_06760 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NQU90_06770 PF00535 Glycosyl transferase family 2 NQU90_06785 PF00535 Glycosyl transferase family 2 NQU90_06790 PF01370 NAD dependent epimerase/dehydratase family NQU90_06795 PF02397 Bacterial sugar transferase NQU90_06800 PF02719 Polysaccharide biosynthesis protein NQU90_06805 PF02706 Chain length determinant protein NQU90_06815 PF00816 H-NS histone family NQU90_06820 PF02321 Outer membrane efflux protein NQU90_06825 PF00005 ABC transporter NQU90_06825 PF02687 FtsX-like permease family NQU90_06825 PF12704 MacB-like periplasmic core domain NQU90_06830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_06835 PF01368 DHH family NQU90_06835 PF02833 DHHA2 domain NQU90_06845 PF02463 RecF/RecN/SMC N terminal domain NQU90_06850 PF02056 Family 4 glycosyl hydrolase NQU90_06850 PF11975 Family 4 glycosyl hydrolase C-terminal domain NQU90_06855 PF03466 LysR substrate binding domain NQU90_06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_06860 PF01513 ATP-NAD kinase NQU90_06865 PF01025 GrpE NQU90_06870 PF00012 Hsp70 protein NQU90_06875 PF00226 DnaJ domain NQU90_06875 PF01556 DnaJ C terminal domain NQU90_06875 PF00684 DnaJ central domain NQU90_06880 PF02308 MgtC family NQU90_06890 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_06905 PF04143 Sulphur transport NQU90_06920 PF00873 AcrB/AcrD/AcrF family NQU90_06930 PF02687 FtsX-like permease family NQU90_06930 PF12704 MacB-like periplasmic core domain NQU90_06930 PF00005 ABC transporter NQU90_06940 PF00005 ABC transporter NQU90_06940 PF02687 FtsX-like permease family NQU90_06940 PF12704 MacB-like periplasmic core domain NQU90_06945 PF00005 ABC transporter NQU90_06945 PF02687 FtsX-like permease family NQU90_06945 PF12704 MacB-like periplasmic core domain NQU90_06950 PF00563 EAL domain NQU90_06950 PF03707 Bacterial signalling protein N terminal repeat NQU90_06950 PF00990 Diguanylate cyclase, GGDEF domain NQU90_06955 PF03099 Biotin/lipoate A/B protein ligase family NQU90_06955 PF10437 Bacterial lipoate protein ligase C-terminus NQU90_06965 PF13460 NAD(P)H-binding NQU90_06970 PF04355 SmpA / OmlA family NQU90_06975 PF00465 Iron-containing alcohol dehydrogenase NQU90_06980 PF01048 Phosphorylase superfamily NQU90_06985 PF00849 RNA pseudouridylate synthase NQU90_06990 PF01156 Inosine-uridine preferring nucleoside hydrolase NQU90_07005 PF07509 Protein of unknown function (DUF1523) NQU90_07010 PF12729 Four helix bundle sensory module for signal transduction NQU90_07010 PF00672 HAMP domain NQU90_07010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_07015 PF01810 LysE type translocator NQU90_07030 PF00999 Sodium/hydrogen exchanger family NQU90_07030 PF02080 TrkA-C domain NQU90_07030 PF03471 Transporter associated domain NQU90_07040 PF02557 D-alanyl-D-alanine carboxypeptidase NQU90_07045 PF01546 Peptidase family M20/M25/M40 NQU90_07045 PF07687 Peptidase dimerisation domain NQU90_07050 PF03960 ArsC family NQU90_07060 PF03606 C4-dicarboxylate anaerobic carrier NQU90_07065 PF07687 Peptidase dimerisation domain NQU90_07065 PF01546 Peptidase family M20/M25/M40 NQU90_07075 PF03605 Anaerobic c4-dicarboxylate membrane transporter NQU90_07085 PF00152 tRNA synthetases class II (D, K and N) NQU90_07085 PF01336 OB-fold nucleic acid binding domain NQU90_07100 PF00202 Aminotransferase class-III NQU90_07105 PF04055 Radical SAM superfamily NQU90_07105 PF06968 Biotin and Thiamin Synthesis associated domain NQU90_07110 PF00155 Aminotransferase class I and II NQU90_07115 PF12697 Alpha/beta hydrolase family NQU90_07115 PF08241 Methyltransferase domain NQU90_07125 PF01435 Peptidase family M48 NQU90_07135 PF12323 Helix-turn-helix domain NQU90_07135 PF01385 Probable transposase NQU90_07135 PF07282 Putative transposase DNA-binding domain NQU90_07150 PF03473 MOSC domain NQU90_07150 PF00111 2Fe-2S iron-sulfur cluster binding domain NQU90_07150 PF03473 MOSC domain NQU90_07150 PF03476 MOSC N-terminal beta barrel domain NQU90_07150 PF03476 MOSC N-terminal beta barrel domain NQU90_07150 PF00111 2Fe-2S iron-sulfur cluster binding domain NQU90_07160 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_07160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQU90_07160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NQU90_07165 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQU90_07165 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQU90_07165 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQU90_07165 PF10371 Domain of unknown function NQU90_07165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQU90_07175 PF01370 NAD dependent epimerase/dehydratase family NQU90_07180 PF03061 Thioesterase superfamily NQU90_07190 PF03372 Endonuclease/Exonuclease/phosphatase family NQU90_07195 PF00462 Glutaredoxin NQU90_07200 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NQU90_07205 PF04851 Type III restriction enzyme, res subunit NQU90_07205 PF00271 Helicase conserved C-terminal domain NQU90_07210 PF00529 HlyD membrane-fusion protein of T1SS NQU90_07210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_07215 PF11742 Protein of unknown function (DUF3302) NQU90_07220 PF02554 Carbon starvation protein CstA NQU90_07225 PF00072 Response regulator receiver domain NQU90_07225 PF04397 LytTr DNA-binding domain NQU90_07230 PF07694 5TMR of 5TMR-LYT NQU90_07230 PF06580 Histidine kinase NQU90_07235 PF01966 HD domain NQU90_07240 PF00884 Sulfatase NQU90_07240 PF08019 Phosphoethanolamine transferase EptA/EptB NQU90_07245 PF01047 MarR family NQU90_07245 PF00480 ROK family NQU90_07250 PF01979 Amidohydrolase family NQU90_07255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NQU90_07260 PF00367 phosphotransferase system, EIIB NQU90_07260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NQU90_07260 PF02378 Phosphotransferase system, EIIC NQU90_07265 PF02838 Glycosyl hydrolase family 20, domain 2 NQU90_07265 PF03173 Putative carbohydrate binding domain NQU90_07265 PF00728 Glycosyl hydrolase family 20, catalytic domain NQU90_07265 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NQU90_07270 PF00749 tRNA synthetases class I (E and Q), catalytic domain NQU90_07270 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NQU90_07275 PF01475 Ferric uptake regulator family NQU90_07285 PF00258 Flavodoxin NQU90_07290 PF01402 Ribbon-helix-helix protein, copG family NQU90_07300 PF12697 Alpha/beta hydrolase family NQU90_07305 PF03925 SeqA protein C-terminal domain NQU90_07305 PF17206 SeqA protein N-terminal domain NQU90_07310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NQU90_07310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NQU90_07310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NQU90_07310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NQU90_07320 PF01047 MarR family NQU90_07325 PF13406 Transglycosylase SLT domain NQU90_07330 PF01066 CDP-alcohol phosphatidyltransferase NQU90_07335 PF00005 ABC transporter NQU90_07345 PF13416 Bacterial extracellular solute-binding protein NQU90_07350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_07350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQU90_07350 PF00403 Heavy-metal-associated domain NQU90_07355 PF02627 Carboxymuconolactone decarboxylase family NQU90_07375 PF01103 Surface antigen NQU90_07375 PF07244 Surface antigen variable number repeat NQU90_07375 PF17243 POTRA domain TamA domain 1 NQU90_07380 PF04357 TamB, inner membrane protein subunit of TAM complex NQU90_07400 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NQU90_07405 PF03707 Bacterial signalling protein N terminal repeat NQU90_07405 PF00990 Diguanylate cyclase, GGDEF domain NQU90_07405 PF00563 EAL domain NQU90_07410 PF14718 Soluble lytic murein transglycosylase L domain NQU90_07410 PF01464 Transglycosylase SLT domain NQU90_07415 PF00356 Bacterial regulatory proteins, lacI family NQU90_07420 PF00793 DAHP synthetase I family NQU90_07425 PF00593 TonB dependent receptor NQU90_07425 PF07715 TonB-dependent Receptor Plug Domain NQU90_07430 PF00425 chorismate binding enzyme NQU90_07435 PF00501 AMP-binding enzyme NQU90_07435 PF13193 AMP-binding enzyme C-terminal domain NQU90_07440 PF00857 Isochorismatase family NQU90_07440 PF00550 Phosphopantetheine attachment site NQU90_07450 PF00975 Thioesterase domain NQU90_07450 PF00501 AMP-binding enzyme NQU90_07450 PF00668 Condensation domain NQU90_07450 PF00550 Phosphopantetheine attachment site NQU90_07460 PF00676 Dehydrogenase E1 component NQU90_07465 PF02779 Transketolase, pyrimidine binding domain NQU90_07465 PF02780 Transketolase, C-terminal domain NQU90_07470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NQU90_07470 PF00364 Biotin-requiring enzyme NQU90_07470 PF02817 e3 binding domain NQU90_07475 PF00313 'Cold-shock' DNA-binding domain NQU90_07500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_07505 PF00455 DeoR C terminal sensor domain NQU90_07505 PF08220 DeoR-like helix-turn-helix domain NQU90_07515 PF04055 Radical SAM superfamily NQU90_07520 PF00923 Transaldolase/Fructose-6-phosphate aldolase NQU90_07530 PF01966 HD domain NQU90_07535 PF00849 RNA pseudouridylate synthase NQU90_07535 PF01479 S4 domain NQU90_07545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_07550 PF12850 Calcineurin-like phosphoesterase superfamily domain NQU90_07565 PF13144 Chaperone for flagella basal body P-ring formation NQU90_07570 PF00072 Response regulator receiver domain NQU90_07570 PF01584 CheW-like domain NQU90_07575 PF01739 CheR methyltransferase, SAM binding domain NQU90_07575 PF03705 CheR methyltransferase, all-alpha domain NQU90_07580 PF00460 Flagella basal body rod protein NQU90_07585 PF00460 Flagella basal body rod protein NQU90_07585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQU90_07590 PF13861 FlgD Tudor-like domain NQU90_07590 PF03963 Flagellar hook capping protein - N-terminal region NQU90_07590 PF13860 FlgD Ig-like domain NQU90_07595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQU90_07595 PF07559 Flagellar basal body protein FlaE NQU90_07595 PF00460 Flagella basal body rod protein NQU90_07600 PF00460 Flagella basal body rod protein NQU90_07600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQU90_07605 PF00460 Flagella basal body rod protein NQU90_07605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQU90_07610 PF02107 Flagellar L-ring protein NQU90_07615 PF02119 Flagellar P-ring protein NQU90_07620 PF10135 Rod binding protein NQU90_07620 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NQU90_07625 PF07196 Flagellin hook IN motif NQU90_07625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQU90_07630 PF00669 Bacterial flagellin N-terminal helical region NQU90_07635 PF03448 MgtE intracellular N domain NQU90_07635 PF01769 Divalent cation transporter NQU90_07635 PF00571 CBS domain NQU90_07640 PF02541 Ppx/GppA phosphatase family NQU90_07645 PF13090 Polyphosphate kinase C-terminal domain 2 NQU90_07645 PF17941 Polyphosphate kinase C-terminal domain 1 NQU90_07645 PF02503 Polyphosphate kinase middle domain NQU90_07645 PF13089 Polyphosphate kinase N-terminal domain NQU90_07650 PF01842 ACT domain NQU90_07660 PF06490 Flagellar regulatory protein FleQ NQU90_07660 PF02954 Bacterial regulatory protein, Fis family NQU90_07660 PF00158 Sigma-54 interaction domain NQU90_07665 PF00512 His Kinase A (phospho-acceptor) domain NQU90_07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_07665 PF13188 PAS domain NQU90_07670 PF02954 Bacterial regulatory protein, Fis family NQU90_07670 PF00072 Response regulator receiver domain NQU90_07670 PF00158 Sigma-54 interaction domain NQU90_07675 PF01784 NIF3 (NGG1p interacting factor 3) NQU90_07680 PF00551 Formyl transferase NQU90_07685 PF02769 AIR synthase related protein, C-terminal domain NQU90_07685 PF00586 AIR synthase related protein, N-terminal domain NQU90_07700 PF00308 Bacterial dnaA protein NQU90_07705 PF00463 Isocitrate lyase family NQU90_07710 PF01274 Malate synthase NQU90_07725 PF14437 MafB19-like deaminase NQU90_07730 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_07735 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_07740 PF00005 ABC transporter NQU90_07745 PF01895 PhoU domain NQU90_07750 PF01595 Cyclin M transmembrane N-terminal domain NQU90_07750 PF03471 Transporter associated domain NQU90_07750 PF00571 CBS domain NQU90_07760 PF02574 Homocysteine S-methyltransferase NQU90_07760 PF00809 Pterin binding enzyme NQU90_07760 PF02965 Vitamin B12 dependent methionine synthase, activation domain NQU90_07760 PF02607 B12 binding domain NQU90_07760 PF02310 B12 binding domain NQU90_07765 PF13520 Amino acid permease NQU90_07770 PF04116 Fatty acid hydroxylase superfamily NQU90_07780 PF00005 ABC transporter NQU90_07795 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_07800 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_07805 PF00990 Diguanylate cyclase, GGDEF domain NQU90_07810 PF07690 Major Facilitator Superfamily NQU90_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_07815 PF07730 Histidine kinase NQU90_07815 PF05231 MASE1 NQU90_07820 PF00196 Bacterial regulatory proteins, luxR family NQU90_07820 PF00072 Response regulator receiver domain NQU90_07825 PF01272 Transcription elongation factor, GreA/GreB, C-term NQU90_07825 PF14760 Rnk N-terminus NQU90_07840 PF00245 Alkaline phosphatase NQU90_07845 PF00245 Alkaline phosphatase NQU90_07850 PF01926 50S ribosome-binding GTPase NQU90_07855 PF00850 Histone deacetylase domain NQU90_07865 PF06733 DEAD_2 NQU90_07865 PF13307 Helicase C-terminal domain NQU90_07870 PF00267 Gram-negative porin NQU90_07895 PF18393 MotY N-terminal domain NQU90_07895 PF00691 OmpA family NQU90_07900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQU90_07905 PF10576 Iron-sulfur binding domain of endonuclease III NQU90_07905 PF00730 HhH-GPD superfamily base excision DNA repair protein NQU90_07905 PF00633 Helix-hairpin-helix motif NQU90_07910 PF02508 Rnf-Nqr subunit, membrane protein NQU90_07915 PF04205 FMN-binding domain NQU90_07920 PF03116 NQR2, RnfD, RnfE family NQU90_07925 PF12838 4Fe-4S dicluster domain NQU90_07925 PF10531 SLBB domain NQU90_07925 PF13375 RnfC Barrel sandwich hybrid domain NQU90_07925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NQU90_07930 PF04060 Putative Fe-S cluster NQU90_07935 PF02508 Rnf-Nqr subunit, membrane protein NQU90_07940 PF00271 Helicase conserved C-terminal domain NQU90_07940 PF04851 Type III restriction enzyme, res subunit NQU90_07950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQU90_07965 PF00849 RNA pseudouridylate synthase NQU90_07965 PF01479 S4 domain NQU90_07970 PF07690 Major Facilitator Superfamily NQU90_07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_07975 PF03466 LysR substrate binding domain NQU90_07980 PF10689 Protein of unknown function (DUF2496) NQU90_07985 PF03061 Thioesterase superfamily NQU90_07990 PF04391 Protein of unknown function (DUF533) NQU90_08000 PF00155 Aminotransferase class I and II NQU90_08000 PF00392 Bacterial regulatory proteins, gntR family NQU90_08005 PF01654 Cytochrome bd terminal oxidase subunit I NQU90_08010 PF02322 Cytochrome bd terminal oxidase subunit II NQU90_08030 PF05114 Protein of unknown function (DUF692) NQU90_08045 PF02525 Flavodoxin-like fold NQU90_08050 PF07690 Major Facilitator Superfamily NQU90_08055 PF00248 Aldo/keto reductase family NQU90_08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_08080 PF03466 LysR substrate binding domain NQU90_08090 PF02743 Cache domain NQU90_08090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_08090 PF00672 HAMP domain NQU90_08095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQU90_08095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQU90_08100 PF00230 Major intrinsic protein NQU90_08105 PF07690 Major Facilitator Superfamily NQU90_08110 PF08220 DeoR-like helix-turn-helix domain NQU90_08110 PF00455 DeoR C terminal sensor domain NQU90_08115 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NQU90_08115 PF01266 FAD dependent oxidoreductase NQU90_08120 PF03009 Glycerophosphoryl diester phosphodiesterase family NQU90_08125 PF03974 Ecotin NQU90_08130 PF04219 Protein of unknown function, DUF NQU90_08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_08135 PF03466 LysR substrate binding domain NQU90_08145 PF00155 Aminotransferase class I and II NQU90_08160 PF03772 Competence protein NQU90_08160 PF00753 Metallo-beta-lactamase superfamily NQU90_08165 PF00005 ABC transporter NQU90_08165 PF00664 ABC transporter transmembrane region NQU90_08170 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NQU90_08175 PF03966 Trm112p-like protein NQU90_08180 PF02348 Cytidylyltransferase NQU90_08185 PF00196 Bacterial regulatory proteins, luxR family NQU90_08185 PF00072 Response regulator receiver domain NQU90_08190 PF01541 GIY-YIG catalytic domain NQU90_08190 PF02151 UvrB/uvrC motif NQU90_08190 PF08459 UvrC Helix-hairpin-helix N-terminal NQU90_08195 PF01066 CDP-alcohol phosphatidyltransferase NQU90_08240 PF00149 Calcineurin-like phosphoesterase NQU90_08250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NQU90_08255 PF01406 tRNA synthetases class I (C) catalytic domain NQU90_08255 PF09190 DALR domain NQU90_08265 PF02463 RecF/RecN/SMC N terminal domain NQU90_08300 PF01169 Uncharacterized protein family UPF0016 NQU90_08305 PF01253 Translation initiation factor SUI1 NQU90_08315 PF07664 Ferrous iron transport protein B C terminus NQU90_08315 PF02421 Ferrous iron transport protein B NQU90_08315 PF07670 Nucleoside recognition NQU90_08330 PF00271 Helicase conserved C-terminal domain NQU90_08330 PF00270 DEAD/DEAH box helicase NQU90_08340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQU90_08340 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_08345 PF01493 GXGXG motif NQU90_08345 PF04898 Glutamate synthase central domain NQU90_08345 PF00310 Glutamine amidotransferases class-II NQU90_08345 PF01645 Conserved region in glutamate synthase NQU90_08350 PF04055 Radical SAM superfamily NQU90_08350 PF16199 Radical_SAM C-terminal domain NQU90_08355 PF00664 ABC transporter transmembrane region NQU90_08355 PF00005 ABC transporter NQU90_08355 PF03412 Peptidase C39 family NQU90_08395 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_08395 PF13192 Thioredoxin domain NQU90_08400 PF10417 C-terminal domain of 1-Cys peroxiredoxin NQU90_08400 PF00578 AhpC/TSA family NQU90_08405 PF00571 CBS domain NQU90_08410 PF02547 Queuosine biosynthesis protein NQU90_08415 PF01702 Queuine tRNA-ribosyltransferase NQU90_08420 PF02699 Preprotein translocase subunit NQU90_08425 PF07549 SecD/SecF GG Motif NQU90_08425 PF02355 Protein export membrane protein NQU90_08425 PF13721 SecD export protein N-terminal TM region NQU90_08430 PF07549 SecD/SecF GG Motif NQU90_08430 PF02355 Protein export membrane protein NQU90_08440 PF13181 Tetratricopeptide repeat NQU90_08440 PF07719 Tetratricopeptide repeat NQU90_08445 PF01136 Peptidase family U32 NQU90_08450 PF01136 Peptidase family U32 NQU90_08455 PF02036 SCP-2 sterol transfer family NQU90_08465 PF00588 SpoU rRNA Methylase family NQU90_08470 PF02082 Transcriptional regulator NQU90_08475 PF00266 Aminotransferase class-V NQU90_08480 PF01592 NifU-like N terminal domain NQU90_08485 PF01521 Iron-sulphur cluster biosynthesis NQU90_08490 PF07743 HSCB C-terminal oligomerisation domain NQU90_08490 PF00226 DnaJ domain NQU90_08495 PF00012 Hsp70 protein NQU90_08500 PF00111 2Fe-2S iron-sulfur cluster binding domain NQU90_08505 PF00883 Cytosol aminopeptidase family, catalytic domain NQU90_08505 PF12404 Peptidase NQU90_08510 PF00883 Cytosol aminopeptidase family, catalytic domain NQU90_08510 PF12404 Peptidase NQU90_08515 PF00334 Nucleoside diphosphate kinase NQU90_08520 PF04055 Radical SAM superfamily NQU90_08530 PF13464 Domain of unknown function (DUF4115) NQU90_08535 PF04551 GcpE protein NQU90_08540 PF13393 Histidyl-tRNA synthetase NQU90_08540 PF03129 Anticodon binding domain NQU90_08545 PF09976 Tetratricopeptide repeat-like domain NQU90_08550 PF13360 PQQ-like domain NQU90_08555 PF01926 50S ribosome-binding GTPase NQU90_08555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NQU90_08560 PF07191 zinc-ribbons NQU90_08565 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_08565 PF01464 Transglycosylase SLT domain NQU90_08570 PF02769 AIR synthase related protein, C-terminal domain NQU90_08570 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NQU90_08570 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NQU90_08575 PF01966 HD domain NQU90_08580 PF00072 Response regulator receiver domain NQU90_08590 PF00361 Proton-conducting membrane transporter NQU90_08595 PF00361 Proton-conducting membrane transporter NQU90_08600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NQU90_08600 PF00361 Proton-conducting membrane transporter NQU90_08605 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NQU90_08610 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NQU90_08615 PF12838 4Fe-4S dicluster domain NQU90_08620 PF00146 NADH dehydrogenase NQU90_08625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQU90_08625 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NQU90_08625 PF00384 Molybdopterin oxidoreductase NQU90_08630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NQU90_08630 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NQU90_08640 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NQU90_08640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NQU90_08645 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NQU90_08650 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NQU90_08670 PF00326 Prolyl oligopeptidase family NQU90_08670 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NQU90_08675 PF00593 TonB dependent receptor NQU90_08675 PF07715 TonB-dependent Receptor Plug Domain NQU90_08680 PF13677 Membrane MotB of proton-channel complex MotA/MotB NQU90_08680 PF00691 OmpA family NQU90_08685 PF01618 MotA/TolQ/ExbB proton channel family NQU90_08690 PF02146 Sir2 family NQU90_08695 PF13808 DDE_Tnp_1-associated NQU90_08695 PF01609 Transposase DDE domain NQU90_08700 PF02899 Phage integrase, N-terminal SAM-like domain NQU90_08700 PF00589 Phage integrase family NQU90_08705 PF05598 Transposase domain (DUF772) NQU90_08705 PF01609 Transposase DDE domain NQU90_08710 PF02899 Phage integrase, N-terminal SAM-like domain NQU90_08710 PF00589 Phage integrase family NQU90_08715 PF07728 AAA domain (dynein-related subfamily) NQU90_08715 PF12102 Domain of unknown function (DUF3578) NQU90_08740 PF04536 TPM domain NQU90_08750 PF03411 Penicillin-insensitive murein endopeptidase NQU90_08755 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_08760 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_08765 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_08770 PF00005 ABC transporter NQU90_08780 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NQU90_08785 PF00248 Aldo/keto reductase family NQU90_08795 PF00106 short chain dehydrogenase NQU90_08800 PF01212 Beta-eliminating lyase NQU90_08810 PF00072 Response regulator receiver domain NQU90_08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_08815 PF03466 LysR substrate binding domain NQU90_08820 PF00563 EAL domain NQU90_08820 PF00990 Diguanylate cyclase, GGDEF domain NQU90_08820 PF03707 Bacterial signalling protein N terminal repeat NQU90_08820 PF13188 PAS domain NQU90_08825 PF03806 AbgT putative transporter family NQU90_08845 PF07690 Major Facilitator Superfamily NQU90_08850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_08850 PF03466 LysR substrate binding domain NQU90_08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_08855 PF03466 LysR substrate binding domain NQU90_08860 PF00925 GTP cyclohydrolase II NQU90_08865 PF02224 Cytidylate kinase NQU90_08870 PF00575 S1 RNA binding domain NQU90_08875 PF00216 Bacterial DNA-binding protein NQU90_08885 PF18073 Rubredoxin metal binding domain NQU90_08890 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NQU90_08905 PF06508 Queuosine biosynthesis protein QueC NQU90_08910 PF04055 Radical SAM superfamily NQU90_08915 PF12843 Putative quorum-sensing-regulated virulence factor NQU90_08920 PF01923 Cobalamin adenosyltransferase NQU90_08925 PF00816 H-NS histone family NQU90_08930 PF03553 Na+/H+ antiporter family NQU90_08935 PF00265 Thymidine kinase NQU90_08945 PF10722 Putative bacterial sensory transduction regulator NQU90_08955 PF13662 Toprim domain NQU90_08955 PF02132 RecR protein NQU90_08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_08960 PF00183 Hsp90 protein NQU90_08965 PF00005 ABC transporter NQU90_08970 PF00005 ABC transporter NQU90_08970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQU90_08975 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_08975 PF12911 N-terminal TM domain of oligopeptide transport permease C NQU90_08980 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_08985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_08990 PF00158 Sigma-54 interaction domain NQU90_08990 PF02954 Bacterial regulatory protein, Fis family NQU90_08995 PF04012 PspA/IM30 family NQU90_09000 PF06667 Phage shock protein B NQU90_09010 PF04317 YcjX-like family, DUF463 NQU90_09015 PF05128 Domain of unknown function (DUF697) NQU90_09020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_09020 PF03466 LysR substrate binding domain NQU90_09025 PF13416 Bacterial extracellular solute-binding protein NQU90_09030 PF00005 ABC transporter NQU90_09030 PF08402 TOBE domain NQU90_09035 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_09040 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_09045 PF00171 Aldehyde dehydrogenase family NQU90_09050 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NQU90_09055 PF01329 Pterin 4 alpha carbinolamine dehydratase NQU90_09065 PF18024 Helix-turn-helix domain NQU90_09065 PF00158 Sigma-54 interaction domain NQU90_09075 PF00990 Diguanylate cyclase, GGDEF domain NQU90_09075 PF17152 Periplasmic sensor domain NQU90_09080 PF00691 OmpA family NQU90_09085 PF03741 Integral membrane protein TerC family NQU90_09095 PF08891 YfcL protein NQU90_09100 PF00501 AMP-binding enzyme NQU90_09105 PF01053 Cys/Met metabolism PLP-dependent enzyme NQU90_09115 PF13460 NAD(P)H-binding NQU90_09120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_09120 PF03466 LysR substrate binding domain NQU90_09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_09125 PF03466 LysR substrate binding domain NQU90_09130 PF07690 Major Facilitator Superfamily NQU90_09135 PF02678 Pirin NQU90_09135 PF05726 Pirin C-terminal cupin domain NQU90_09140 PF00857 Isochorismatase family NQU90_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_09145 PF03466 LysR substrate binding domain NQU90_09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_09150 PF03466 LysR substrate binding domain NQU90_09155 PF01717 Cobalamin-independent synthase, Catalytic domain NQU90_09155 PF08267 Cobalamin-independent synthase, N-terminal domain NQU90_09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_09165 PF03466 LysR substrate binding domain NQU90_09170 PF00232 Glycosyl hydrolase family 1 NQU90_09175 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NQU90_09175 PF18381 YcaO cyclodehydratase C-terminal domain NQU90_09180 PF01226 Formate/nitrite transporter NQU90_09185 PF02901 Pyruvate formate lyase-like NQU90_09185 PF01228 Glycine radical NQU90_09190 PF03692 Putative zinc- or iron-chelating domain NQU90_09210 PF00343 Carbohydrate phosphorylase NQU90_09215 PF00939 Sodium:sulfate symporter transmembrane region NQU90_09220 PF00085 Thioredoxin NQU90_09225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_09225 PF00512 His Kinase A (phospho-acceptor) domain NQU90_09225 PF01627 Hpt domain NQU90_09225 PF00072 Response regulator receiver domain NQU90_09225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NQU90_09225 PF00672 HAMP domain NQU90_09230 PF00664 ABC transporter transmembrane region NQU90_09230 PF00005 ABC transporter NQU90_09235 PF00005 ABC transporter NQU90_09235 PF00664 ABC transporter transmembrane region NQU90_09260 PF08543 Phosphomethylpyrimidine kinase NQU90_09265 PF00465 Iron-containing alcohol dehydrogenase NQU90_09270 PF13673 Acetyltransferase (GNAT) domain NQU90_09285 PF13673 Acetyltransferase (GNAT) domain NQU90_09295 PF00285 Citrate synthase, C-terminal domain NQU90_09300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NQU90_09305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NQU90_09310 PF00890 FAD binding domain NQU90_09310 PF02910 Fumarate reductase flavoprotein C-term NQU90_09315 PF13085 2Fe-2S iron-sulfur cluster binding domain NQU90_09320 PF16078 2-oxoglutarate dehydrogenase N-terminus NQU90_09320 PF00676 Dehydrogenase E1 component NQU90_09320 PF16870 2-oxoglutarate dehydrogenase C-terminal NQU90_09320 PF02779 Transketolase, pyrimidine binding domain NQU90_09325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NQU90_09325 PF00364 Biotin-requiring enzyme NQU90_09325 PF02817 e3 binding domain NQU90_09330 PF08442 ATP-grasp domain NQU90_09330 PF00549 CoA-ligase NQU90_09335 PF02629 CoA binding domain NQU90_09335 PF00549 CoA-ligase NQU90_09340 PF13808 DDE_Tnp_1-associated NQU90_09340 PF01609 Transposase DDE domain NQU90_09345 PF07969 Amidohydrolase family NQU90_09355 PF01266 FAD dependent oxidoreductase NQU90_09360 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_09365 PF00005 ABC transporter NQU90_09375 PF07702 UTRA domain NQU90_09375 PF00392 Bacterial regulatory proteins, gntR family NQU90_09380 PF00266 Aminotransferase class-V NQU90_09385 PF00202 Aminotransferase class-III NQU90_09395 PF03918 Cytochrome C biogenesis protein NQU90_09400 PF08534 Redoxin NQU90_09405 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NQU90_09405 PF01578 Cytochrome C assembly protein NQU90_09410 PF03916 Polysulphide reductase, NrfD NQU90_09415 PF13247 4Fe-4S dicluster domain NQU90_09415 PF00037 4Fe-4S binding domain NQU90_09420 PF13435 Cytochrome c554 and c-prime NQU90_09420 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NQU90_09425 PF02335 Cytochrome c552 NQU90_09435 PF02754 Cysteine-rich domain NQU90_09435 PF13183 4Fe-4S dicluster domain NQU90_09440 PF00890 FAD binding domain NQU90_09445 PF01266 FAD dependent oxidoreductase NQU90_09445 PF04324 BFD-like [2Fe-2S] binding domain NQU90_09450 PF02810 SEC-C motif NQU90_09455 PF00672 HAMP domain NQU90_09455 PF17200 Single Cache domain 2 NQU90_09455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_09460 PF01047 MarR family NQU90_09460 PF00480 ROK family NQU90_09465 PF03942 DTW domain NQU90_09470 PF01925 Sulfite exporter TauE/SafE NQU90_09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_09475 PF03466 LysR substrate binding domain NQU90_09485 PF14525 AraC-binding-like domain NQU90_09485 PF12833 Helix-turn-helix domain NQU90_09490 PF11398 Protein of unknown function (DUF2813) NQU90_09500 PF00128 Alpha amylase, catalytic domain NQU90_09500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NQU90_09530 PF00883 Cytosol aminopeptidase family, catalytic domain NQU90_09530 PF02789 Cytosol aminopeptidase family, N-terminal domain NQU90_09535 PF13419 Haloacid dehalogenase-like hydrolase NQU90_09550 PF01207 Dihydrouridine synthase (Dus) NQU90_09555 PF04304 Protein of unknown function (DUF454) NQU90_09560 PF00156 Phosphoribosyl transferase domain NQU90_09565 PF12169 DNA polymerase III subunits gamma and tau domain III NQU90_09565 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NQU90_09565 PF12170 DNA polymerase III tau subunit V interacting with alpha NQU90_09570 PF02575 YbaB/EbfC DNA-binding family NQU90_09575 PF01261 Xylose isomerase-like TIM barrel NQU90_09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_09580 PF03466 LysR substrate binding domain NQU90_09590 PF03279 Bacterial lipid A biosynthesis acyltransferase NQU90_09595 PF03279 Bacterial lipid A biosynthesis acyltransferase NQU90_09610 PF00990 Diguanylate cyclase, GGDEF domain NQU90_09620 PF03104 DNA polymerase family B, exonuclease domain NQU90_09620 PF00136 DNA polymerase family B NQU90_09635 PF01863 Protein of unknown function DUF45 NQU90_09650 PF03606 C4-dicarboxylate anaerobic carrier NQU90_09665 PF01266 FAD dependent oxidoreductase NQU90_09665 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NQU90_09670 PF00109 Beta-ketoacyl synthase, N-terminal domain NQU90_09670 PF02801 Beta-ketoacyl synthase, C-terminal domain NQU90_09680 PF06826 Predicted Permease Membrane Region NQU90_09680 PF02080 TrkA-C domain NQU90_09695 PF17757 UvrB interaction domain NQU90_09695 PF12344 Ultra-violet resistance protein B NQU90_09695 PF00271 Helicase conserved C-terminal domain NQU90_09695 PF04851 Type III restriction enzyme, res subunit NQU90_09695 PF02151 UvrB/uvrC motif NQU90_09705 PF09335 SNARE associated Golgi protein NQU90_09710 PF02600 Disulfide bond formation protein DsbB NQU90_09715 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NQU90_09720 PF07840 FadR C-terminal domain NQU90_09720 PF00392 Bacterial regulatory proteins, gntR family NQU90_09730 PF07152 YaeQ protein NQU90_09740 PF01381 Helix-turn-helix NQU90_09740 PF00717 Peptidase S24-like NQU90_09855 PF08461 Ribonuclease R winged-helix domain NQU90_09860 PF11985 Protein of unknown function (DUF3486) NQU90_09865 PF03237 Terminase-like family NQU90_09870 PF06074 Protein of unknown function (DUF935) NQU90_09910 PF10123 Mu-like prophage I protein NQU90_09915 PF10124 Mu-like prophage major head subunit gpT NQU90_10005 PF02954 Bacterial regulatory protein, Fis family NQU90_10005 PF13188 PAS domain NQU90_10005 PF00158 Sigma-54 interaction domain NQU90_10035 PF01554 MatE NQU90_10040 PF06786 Uncharacterised protein family (UPF0253) NQU90_10050 PF00677 Lumazine binding domain NQU90_10060 PF13419 Haloacid dehalogenase-like hydrolase NQU90_10065 PF01370 NAD dependent epimerase/dehydratase family NQU90_10065 PF02222 ATP-grasp domain NQU90_10070 PF00892 EamA-like transporter family NQU90_10075 PF02525 Flavodoxin-like fold NQU90_10100 PF17783 CvfB-like winged helix domain NQU90_10100 PF13509 S1 domain NQU90_10110 PF04269 Protein of unknown function, DUF440 NQU90_10120 PF00912 Transglycosylase NQU90_10125 PF04269 Protein of unknown function, DUF440 NQU90_10130 PF03776 Septum formation topological specificity factor MinE NQU90_10135 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NQU90_10140 PF03775 Septum formation inhibitor MinC, C-terminal domain NQU90_10140 PF05209 Septum formation inhibitor MinC, N-terminal domain NQU90_10145 PF05166 YcgL domain NQU90_10150 PF03315 Serine dehydratase beta chain NQU90_10150 PF03313 Serine dehydratase alpha chain NQU90_10155 PF03315 Serine dehydratase beta chain NQU90_10155 PF03313 Serine dehydratase alpha chain NQU90_10160 PF06865 Pyrimidine/purine nucleoside phosphorylase NQU90_10165 PF00375 Sodium:dicarboxylate symporter family NQU90_10170 PF00365 Phosphofructokinase NQU90_10175 PF00121 Triosephosphate isomerase NQU90_10180 PF02698 DUF218 domain NQU90_10185 PF13847 Methyltransferase domain NQU90_10190 PF17192 MukF middle domain NQU90_10190 PF17193 MukF C-terminal domain NQU90_10190 PF03882 MukF winged-helix domain NQU90_10195 PF04288 MukE-like family NQU90_10200 PF04310 MukB N-terminal NQU90_10200 PF16330 MukB hinge domain NQU90_10205 PF05036 Sporulation related domain NQU90_10205 PF03330 Lytic transglycolase NQU90_10210 PF01609 Transposase DDE domain NQU90_10210 PF13808 DDE_Tnp_1-associated NQU90_10245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NQU90_10245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NQU90_10250 PF00291 Pyridoxal-phosphate dependent enzyme NQU90_10255 PF07687 Peptidase dimerisation domain NQU90_10255 PF01546 Peptidase family M20/M25/M40 NQU90_10260 PF01979 Amidohydrolase family NQU90_10265 PF00696 Amino acid kinase family NQU90_10270 PF00892 EamA-like transporter family NQU90_10275 PF13478 XdhC Rossmann domain NQU90_10275 PF02625 XdhC and CoxI family NQU90_10285 PF12804 MobA-like NTP transferase domain NQU90_10290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQU90_10290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_10295 PF01979 Amidohydrolase family NQU90_10300 PF00941 FAD binding domain in molybdopterin dehydrogenase NQU90_10305 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQU90_10305 PF01799 [2Fe-2S] binding domain NQU90_10305 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQU90_10310 PF00860 Permease family NQU90_10315 PF01979 Amidohydrolase family NQU90_10320 PF00860 Permease family NQU90_10325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQU90_10325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQU90_10330 PF03450 CO dehydrogenase flavoprotein C-terminal domain NQU90_10330 PF00941 FAD binding domain in molybdopterin dehydrogenase NQU90_10335 PF00111 2Fe-2S iron-sulfur cluster binding domain NQU90_10335 PF01799 [2Fe-2S] binding domain NQU90_10340 PF05433 Glycine zipper 2TM domain NQU90_10350 PF03606 C4-dicarboxylate anaerobic carrier NQU90_10355 PF05598 Transposase domain (DUF772) NQU90_10355 PF01609 Transposase DDE domain NQU90_10360 PF00501 AMP-binding enzyme NQU90_10360 PF13193 AMP-binding enzyme C-terminal domain NQU90_10365 PF08448 PAS fold NQU90_10365 PF00990 Diguanylate cyclase, GGDEF domain NQU90_10380 PF01609 Transposase DDE domain NQU90_10380 PF05598 Transposase domain (DUF772) NQU90_10385 PF01609 Transposase DDE domain NQU90_10385 PF13808 DDE_Tnp_1-associated NQU90_10390 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NQU90_10390 PF01502 Phosphoribosyl-AMP cyclohydrolase NQU90_10395 PF00977 Histidine biosynthesis protein NQU90_10400 PF00977 Histidine biosynthesis protein NQU90_10405 PF00117 Glutamine amidotransferase class-I NQU90_10410 PF00475 Imidazoleglycerol-phosphate dehydratase NQU90_10410 PF08645 Polynucleotide kinase 3 phosphatase NQU90_10415 PF00155 Aminotransferase class I and II NQU90_10420 PF00815 Histidinol dehydrogenase NQU90_10425 PF01634 ATP phosphoribosyltransferase NQU90_10425 PF08029 HisG, C-terminal domain NQU90_10435 PF04851 Type III restriction enzyme, res subunit NQU90_10435 PF13307 Helicase C-terminal domain NQU90_10440 PF00814 Glycoprotease family NQU90_10450 PF12697 Alpha/beta hydrolase family NQU90_10455 PF00501 AMP-binding enzyme NQU90_10455 PF13193 AMP-binding enzyme C-terminal domain NQU90_10460 PF01612 3'-5' exonuclease NQU90_10460 PF00570 HRDC domain NQU90_10465 PF00753 Metallo-beta-lactamase superfamily NQU90_10475 PF00586 AIR synthase related protein, N-terminal domain NQU90_10475 PF02769 AIR synthase related protein, C-terminal domain NQU90_10490 PF17785 PUA-like domain NQU90_10490 PF10672 S-adenosylmethionine-dependent methyltransferase NQU90_10495 PF00672 HAMP domain NQU90_10495 PF12729 Four helix bundle sensory module for signal transduction NQU90_10495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_10500 PF00708 Acylphosphatase NQU90_10510 PF01588 Putative tRNA binding domain NQU90_10510 PF08264 Anticodon-binding domain of tRNA NQU90_10510 PF09334 tRNA synthetases class I (M) NQU90_10515 PF10609 NUBPL iron-transfer P-loop NTPase NQU90_10520 PF00485 Phosphoribulokinase / Uridine kinase family NQU90_10525 PF00692 dUTPase NQU90_10530 PF01384 Phosphate transporter family NQU90_10540 PF12111 Polyribonucleotide phosphorylase C terminal NQU90_10540 PF10150 Ribonuclease E/G family NQU90_10540 PF00575 S1 RNA binding domain NQU90_10545 PF00849 RNA pseudouridylate synthase NQU90_10545 PF01479 S4 domain NQU90_10550 PF13419 Haloacid dehalogenase-like hydrolase NQU90_10555 PF02545 Maf-like protein NQU90_10560 PF02620 Large ribosomal RNA subunit accumulation protein YceD NQU90_10565 PF01783 Ribosomal L32p protein family NQU90_10570 PF02504 Fatty acid synthesis protein NQU90_10575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NQU90_10575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NQU90_10580 PF00698 Acyl transferase domain NQU90_10590 PF00550 Phosphopantetheine attachment site NQU90_10595 PF00109 Beta-ketoacyl synthase, N-terminal domain NQU90_10595 PF02801 Beta-ketoacyl synthase, C-terminal domain NQU90_10600 PF01063 Amino-transferase class IV NQU90_10605 PF02618 YceG-like family NQU90_10610 PF02223 Thymidylate kinase NQU90_10615 PF09115 DNA polymerase III, delta subunit, C terminal NQU90_10620 PF01026 TatD related DNase NQU90_10625 PF00589 Phage integrase family NQU90_10635 PF01189 16S rRNA methyltransferase RsmB/F NQU90_10635 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NQU90_10635 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NQU90_10640 PF02470 MlaD protein NQU90_10645 PF04403 Paraquat-inducible protein A NQU90_10660 PF00285 Citrate synthase, C-terminal domain NQU90_10665 PF03972 MmgE/PrpD family NQU90_10680 PF06974 Protein of unknown function (DUF1298) NQU90_10680 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NQU90_10705 PF00106 short chain dehydrogenase NQU90_10710 PF01674 Lipase (class 2) NQU90_10715 PF07130 YebG protein NQU90_10725 PF05598 Transposase domain (DUF772) NQU90_10725 PF01609 Transposase DDE domain NQU90_10740 PF13654 AAA domain NQU90_10740 PF05362 Lon protease (S16) C-terminal proteolytic domain NQU90_10745 PF07977 FabA-like domain NQU90_10750 PF04957 Ribosome modulation factor NQU90_10755 PF16326 ABC transporter C-terminal domain NQU90_10755 PF12848 ABC transporter NQU90_10755 PF00005 ABC transporter NQU90_10765 PF10672 S-adenosylmethionine-dependent methyltransferase NQU90_10765 PF02926 THUMP domain NQU90_10765 PF01170 Putative RNA methylase family UPF0020 NQU90_10770 PF00444 Ribosomal protein L36 NQU90_10775 PF01197 Ribosomal protein L31 NQU90_10780 PF05598 Transposase domain (DUF772) NQU90_10780 PF01609 Transposase DDE domain NQU90_10785 PF07126 Cell-division protein ZapC NQU90_10790 PF01180 Dihydroorotate dehydrogenase NQU90_10795 PF05088 Bacterial NAD-glutamate dehydrogenase NQU90_10805 PF11940 Domain of unknown function (DUF3458) Ig-like fold NQU90_10805 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NQU90_10805 PF01433 Peptidase family M1 domain NQU90_10810 PF03572 Peptidase family S41 NQU90_10810 PF17804 Tail specific protease N-terminal domain NQU90_10810 PF00595 PDZ domain NQU90_10810 PF11818 C-terminal domain of tail specific protease (DUF3340) NQU90_10815 PF04352 ProQ/FINO family NQU90_10815 PF17516 ProQ C-terminal domain NQU90_10820 PF13185 GAF domain NQU90_10830 PF00115 Cytochrome C and Quinol oxidase polypeptide I NQU90_10845 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NQU90_10845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NQU90_10855 PF00403 Heavy-metal-associated domain NQU90_10870 PF00027 Cyclic nucleotide-binding domain NQU90_10870 PF13545 Crp-like helix-turn-helix domain NQU90_10875 PF00582 Universal stress protein family NQU90_10880 PF01171 PP-loop family NQU90_10895 PF00005 ABC transporter NQU90_10895 PF08402 TOBE domain NQU90_10900 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_10905 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_10910 PF13416 Bacterial extracellular solute-binding protein NQU90_10925 PF13417 Glutathione S-transferase, N-terminal domain NQU90_10930 PF05025 RbsD / FucU transport protein family NQU90_10935 PF00005 ABC transporter NQU90_10940 PF02653 Branched-chain amino acid transport system / permease component NQU90_10945 PF13407 Periplasmic binding protein domain NQU90_10950 PF00294 pfkB family carbohydrate kinase NQU90_10955 PF00356 Bacterial regulatory proteins, lacI family NQU90_10960 PF00563 EAL domain NQU90_10960 PF03707 Bacterial signalling protein N terminal repeat NQU90_10960 PF00990 Diguanylate cyclase, GGDEF domain NQU90_10970 PF02146 Sir2 family NQU90_10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_10985 PF09456 RcsC Alpha-Beta-Loop (ABL) NQU90_10985 PF00072 Response regulator receiver domain NQU90_10985 PF00512 His Kinase A (phospho-acceptor) domain NQU90_10990 PF00216 Bacterial DNA-binding protein NQU90_10995 PF03484 tRNA synthetase B5 domain NQU90_10995 PF03483 B3/4 domain NQU90_10995 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NQU90_10995 PF03147 Ferredoxin-fold anticodon binding domain NQU90_10995 PF01588 Putative tRNA binding domain NQU90_11000 PF01409 tRNA synthetases class II core domain (F) NQU90_11000 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NQU90_11005 PF00453 Ribosomal protein L20 NQU90_11010 PF01632 Ribosomal protein L35 NQU90_11015 PF05198 Translation initiation factor IF-3, N-terminal domain NQU90_11015 PF00707 Translation initiation factor IF-3, C-terminal domain NQU90_11020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQU90_11020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQU90_11020 PF02824 TGS domain NQU90_11020 PF03129 Anticodon binding domain NQU90_11030 PF04055 Radical SAM superfamily NQU90_11040 PF00128 Alpha amylase, catalytic domain NQU90_11045 PF03989 DNA gyrase C-terminal domain, beta-propeller NQU90_11045 PF00521 DNA gyrase/topoisomerase IV, subunit A NQU90_11055 PF13419 Haloacid dehalogenase-like hydrolase NQU90_11060 PF03477 ATP cone domain NQU90_11060 PF02867 Ribonucleotide reductase, barrel domain NQU90_11060 PF00317 Ribonucleotide reductase, all-alpha domain NQU90_11065 PF00268 Ribonucleotide reductase, small chain NQU90_11070 PF00111 2Fe-2S iron-sulfur cluster binding domain NQU90_11075 PF06725 3D domain NQU90_11075 PF03562 MltA specific insert domain NQU90_11080 PF06945 Protein of unknown function (DUF1289) NQU90_11090 PF03613 PTS system mannose/fructose/sorbose family IID component NQU90_11095 PF03609 PTS system sorbose-specific iic component NQU90_11100 PF03610 PTS system fructose IIA component NQU90_11100 PF03830 PTS system sorbose subfamily IIB component NQU90_11115 PF00356 Bacterial regulatory proteins, lacI family NQU90_11115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NQU90_11120 PF06560 Glucose-6-phosphate isomerase (GPI) NQU90_11125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NQU90_11125 PF02378 Phosphotransferase system, EIIC NQU90_11130 PF00294 pfkB family carbohydrate kinase NQU90_11135 PF00381 PTS HPr component phosphorylation site NQU90_11135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NQU90_11140 PF00356 Bacterial regulatory proteins, lacI family NQU90_11140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NQU90_11145 PF03222 Tryptophan/tyrosine permease family NQU90_11155 PF01124 MAPEG family NQU90_11165 PF00270 DEAD/DEAH box helicase NQU90_11165 PF00271 Helicase conserved C-terminal domain NQU90_11175 PF01264 Chorismate synthase NQU90_11180 PF05175 Methyltransferase small domain NQU90_11185 PF01713 Smr domain NQU90_11190 PF08448 PAS fold NQU90_11190 PF00990 Diguanylate cyclase, GGDEF domain NQU90_11195 PF00300 Histidine phosphatase superfamily (branch 1) NQU90_11200 PF08329 Chitinase A, N-terminal domain NQU90_11200 PF00704 Glycosyl hydrolases family 18 NQU90_11205 PF01609 Transposase DDE domain NQU90_11205 PF13808 DDE_Tnp_1-associated NQU90_11220 PF03831 PhnA domain NQU90_11220 PF08274 PhnA Zinc-Ribbon NQU90_11230 PF04715 Anthranilate synthase component I, N terminal region NQU90_11230 PF00425 chorismate binding enzyme NQU90_11235 PF00293 NUDIX domain NQU90_11240 PF03222 Tryptophan/tyrosine permease family NQU90_11250 PF00375 Sodium:dicarboxylate symporter family NQU90_11255 PF00270 DEAD/DEAH box helicase NQU90_11255 PF09382 RQC domain NQU90_11255 PF16124 RecQ zinc-binding NQU90_11255 PF00271 Helicase conserved C-terminal domain NQU90_11255 PF00570 HRDC domain NQU90_11260 PF06798 PrkA serine protein kinase C-terminal domain NQU90_11260 PF08298 PrkA AAA domain NQU90_11265 PF04285 Protein of unknown function (DUF444) NQU90_11270 PF04293 SpoVR like protein NQU90_11275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NQU90_11275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NQU90_11275 PF00378 Enoyl-CoA hydratase/isomerase NQU90_11280 PF02803 Thiolase, C-terminal domain NQU90_11280 PF00108 Thiolase, N-terminal domain NQU90_11285 PF07726 ATPase family associated with various cellular activities (AAA) NQU90_11285 PF17863 AAA lid domain NQU90_11290 PF01882 Protein of unknown function DUF58 NQU90_11305 PF13519 von Willebrand factor type A domain NQU90_11315 PF04542 Sigma-70 region 2 NQU90_11315 PF08281 Sigma-70, region 4 NQU90_11325 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NQU90_11330 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NQU90_11335 PF08668 HDOD domain NQU90_11335 PF00563 EAL domain NQU90_11340 PF02803 Thiolase, C-terminal domain NQU90_11340 PF00108 Thiolase, N-terminal domain NQU90_11345 PF00376 MerR family regulatory protein NQU90_11345 PF09278 MerR, DNA binding NQU90_11350 PF01386 Ribosomal L25p family NQU90_11360 PF00270 DEAD/DEAH box helicase NQU90_11360 PF11898 Domain of unknown function (DUF3418) NQU90_11360 PF04408 Helicase associated domain (HA2) NQU90_11360 PF00271 Helicase conserved C-terminal domain NQU90_11360 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NQU90_11365 PF01743 Poly A polymerase head domain NQU90_11365 PF01368 DHH family NQU90_11365 PF00571 CBS domain NQU90_11365 PF02272 DHHA1 domain NQU90_11370 PF01966 HD domain NQU90_11385 PF08411 Exonuclease C-terminal NQU90_11385 PF00929 Exonuclease NQU90_11400 PF03788 LrgA family NQU90_11405 PF04172 LrgB-like family NQU90_11410 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NQU90_11410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NQU90_11415 PF01212 Beta-eliminating lyase NQU90_11425 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NQU90_11430 PF01266 FAD dependent oxidoreductase NQU90_11435 PF01118 Semialdehyde dehydrogenase, NAD binding domain NQU90_11435 PF02774 Semialdehyde dehydrogenase, dimerisation domain NQU90_11440 PF02634 FdhD/NarQ family NQU90_11445 PF02954 Bacterial regulatory protein, Fis family NQU90_11445 PF00158 Sigma-54 interaction domain NQU90_11445 PF01590 GAF domain NQU90_11460 PF13247 4Fe-4S dicluster domain NQU90_11460 PF12800 4Fe-4S binding domain NQU90_11470 PF13808 DDE_Tnp_1-associated NQU90_11470 PF01609 Transposase DDE domain NQU90_11475 PF03466 LysR substrate binding domain NQU90_11475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_11480 PF00881 Nitroreductase family NQU90_11490 PF02321 Outer membrane efflux protein NQU90_11495 PF00873 AcrB/AcrD/AcrF family NQU90_11510 PF09615 CRISPR-associated protein (Cas_Csy3) NQU90_11535 PF13401 AAA domain NQU90_11535 PF01471 Putative peptidoglycan binding domain NQU90_11555 PF01925 Sulfite exporter TauE/SafE NQU90_11560 PF13520 Amino acid permease NQU90_11570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NQU90_11570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NQU90_11575 PF00378 Enoyl-CoA hydratase/isomerase NQU90_11580 PF00378 Enoyl-CoA hydratase/isomerase NQU90_11585 PF02770 Acyl-CoA dehydrogenase, middle domain NQU90_11585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NQU90_11585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NQU90_11590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NQU90_11590 PF02770 Acyl-CoA dehydrogenase, middle domain NQU90_11590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NQU90_11595 PF01039 Carboxyl transferase domain NQU90_11600 PF00378 Enoyl-CoA hydratase/isomerase NQU90_11605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NQU90_11605 PF00289 Biotin carboxylase, N-terminal domain NQU90_11605 PF00364 Biotin-requiring enzyme NQU90_11605 PF02785 Biotin carboxylase C-terminal domain NQU90_11610 PF00682 HMGL-like NQU90_11615 PF00376 MerR family regulatory protein NQU90_11615 PF09278 MerR, DNA binding NQU90_11630 PF01184 GPR1/FUN34/yaaH family NQU90_11635 PF06167 Glucose-regulated metallo-peptidase M90 NQU90_11645 PF01235 Sodium:alanine symporter family NQU90_11650 PF00378 Enoyl-CoA hydratase/isomerase NQU90_11665 PF04341 Protein of unknown function, DUF485 NQU90_11670 PF00474 Sodium:solute symporter family NQU90_11675 PF00005 ABC transporter NQU90_11675 PF12848 ABC transporter NQU90_11680 PF13145 PPIC-type PPIASE domain NQU90_11685 PF00216 Bacterial DNA-binding protein NQU90_11690 PF05362 Lon protease (S16) C-terminal proteolytic domain NQU90_11690 PF02190 ATP-dependent protease La (LON) substrate-binding domain NQU90_11690 PF00004 ATPase family associated with various cellular activities (AAA) NQU90_11695 PF07724 AAA domain (Cdc48 subfamily) NQU90_11695 PF10431 C-terminal, D2-small domain, of ClpB protein NQU90_11695 PF06689 ClpX C4-type zinc finger NQU90_11700 PF00574 Clp protease NQU90_11705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NQU90_11705 PF05698 Bacterial trigger factor protein (TF) C-terminus NQU90_11705 PF05697 Bacterial trigger factor protein (TF) NQU90_11720 PF02687 FtsX-like permease family NQU90_11720 PF12704 MacB-like periplasmic core domain NQU90_11725 PF00005 ABC transporter NQU90_11730 PF12704 MacB-like periplasmic core domain NQU90_11730 PF02687 FtsX-like permease family NQU90_11740 PF00271 Helicase conserved C-terminal domain NQU90_11740 PF03461 TRCF domain NQU90_11740 PF17757 UvrB interaction domain NQU90_11740 PF02559 CarD-like/TRCF domain NQU90_11740 PF00270 DEAD/DEAH box helicase NQU90_11745 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NQU90_11750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_11755 PF00892 EamA-like transporter family NQU90_11765 PF00300 Histidine phosphatase superfamily (branch 1) NQU90_11770 PF00675 Insulinase (Peptidase family M16) NQU90_11770 PF05193 Peptidase M16 inactive domain NQU90_11770 PF16187 Middle or third domain of peptidase_M16 NQU90_11775 PF05724 Thiopurine S-methyltransferase (TPMT) NQU90_11790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NQU90_11790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NQU90_11790 PF02805 Metal binding domain of Ada NQU90_11790 PF12833 Helix-turn-helix domain NQU90_11805 PF13808 DDE_Tnp_1-associated NQU90_11805 PF01609 Transposase DDE domain NQU90_11810 PF07693 KAP family P-loop domain NQU90_11820 PF02540 NAD synthase NQU90_11820 PF00117 Glutamine amidotransferase class-I NQU90_11820 PF00958 GMP synthase C terminal domain NQU90_11825 PF00571 CBS domain NQU90_11825 PF00478 IMP dehydrogenase / GMP reductase domain NQU90_11835 PF02601 Exonuclease VII, large subunit NQU90_11835 PF13742 OB-fold nucleic acid binding domain NQU90_11840 PF00392 Bacterial regulatory proteins, gntR family NQU90_11840 PF07702 UTRA domain NQU90_11845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NQU90_11845 PF02378 Phosphotransferase system, EIIC NQU90_11845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NQU90_11850 PF09261 Alpha mannosidase middle domain NQU90_11850 PF07748 Glycosyl hydrolases family 38 C-terminal domain NQU90_11850 PF01074 Glycosyl hydrolases family 38 N-terminal domain NQU90_11855 PF01820 D-ala D-ala ligase N-terminus NQU90_11855 PF07478 D-ala D-ala ligase C-terminus NQU90_11865 PF00255 Glutathione peroxidase NQU90_11870 PF00270 DEAD/DEAH box helicase NQU90_11870 PF00271 Helicase conserved C-terminal domain NQU90_11875 PF04055 Radical SAM superfamily NQU90_11880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_11880 PF00672 HAMP domain NQU90_11885 PF00793 DAHP synthetase I family NQU90_11890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NQU90_11895 PF00266 Aminotransferase class-V NQU90_11900 PF00766 Electron transfer flavoprotein FAD-binding domain NQU90_11900 PF01012 Electron transfer flavoprotein domain NQU90_11905 PF01012 Electron transfer flavoprotein domain NQU90_11915 PF01544 CorA-like Mg2+ transporter protein NQU90_11920 PF11143 Protein of unknown function (DUF2919) NQU90_11930 PF07273 Protein of unknown function (DUF1439) NQU90_11940 PF00483 Nucleotidyl transferase NQU90_11945 PF03707 Bacterial signalling protein N terminal repeat NQU90_11945 PF00990 Diguanylate cyclase, GGDEF domain NQU90_11945 PF00563 EAL domain NQU90_11960 PF00294 pfkB family carbohydrate kinase NQU90_11970 PF00762 Ferrochelatase NQU90_11975 PF05191 Adenylate kinase, active site lid NQU90_11980 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NQU90_11985 PF00156 Phosphoribosyl transferase domain NQU90_11990 PF02674 Colicin V production protein NQU90_12000 PF02403 Seryl-tRNA synthetase N-terminal domain NQU90_12000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQU90_12005 PF00004 ATPase family associated with various cellular activities (AAA) NQU90_12005 PF16193 AAA C-terminal domain NQU90_12005 PF12002 MgsA AAA+ ATPase C terminal NQU90_12010 PF03548 Outer membrane lipoprotein carrier protein LolA NQU90_12015 PF09397 Ftsk gamma domain NQU90_12015 PF01580 FtsK/SpoIIIE family NQU90_12015 PF17854 FtsK alpha domain NQU90_12015 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NQU90_12020 PF01037 Lrp/AsnC ligand binding domain NQU90_12025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NQU90_12025 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NQU90_12030 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_12035 PF00990 Diguanylate cyclase, GGDEF domain NQU90_12035 PF17158 Membrane-associated sensor, integral membrane domain NQU90_12040 PF05433 Glycine zipper 2TM domain NQU90_12045 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NQU90_12050 PF04377 Arginine-tRNA-protein transferase, C terminus NQU90_12050 PF04376 Arginine-tRNA-protein transferase, N terminus NQU90_12055 PF01176 Translation initiation factor 1A / IF-1 NQU90_12060 PF10431 C-terminal, D2-small domain, of ClpB protein NQU90_12060 PF02861 Clp amino terminal domain, pathogenicity island component NQU90_12060 PF07724 AAA domain (Cdc48 subfamily) NQU90_12060 PF17871 AAA lid domain NQU90_12060 PF00004 ATPase family associated with various cellular activities (AAA) NQU90_12065 PF02617 ATP-dependent Clp protease adaptor protein ClpS NQU90_12070 PF00313 'Cold-shock' DNA-binding domain NQU90_12075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NQU90_12075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NQU90_12095 PF00486 Transcriptional regulatory protein, C terminal NQU90_12095 PF00072 Response regulator receiver domain NQU90_12100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_12100 PF00512 His Kinase A (phospho-acceptor) domain NQU90_12100 PF00672 HAMP domain NQU90_12110 PF09924 Uncharacterised conserved protein (DUF2156) NQU90_12110 PF03706 Lysylphosphatidylglycerol synthase TM region NQU90_12125 PF01740 STAS domain NQU90_12125 PF00916 Sulfate permease family NQU90_12175 PF13356 Arm DNA-binding domain NQU90_12175 PF00589 Phage integrase family NQU90_12175 PF14659 Phage integrase, N-terminal SAM-like domain NQU90_12210 PF03350 Uncharacterized protein family, UPF0114 NQU90_12225 PF03239 Iron permease FTR1 family NQU90_12230 PF01593 Flavin containing amine oxidoreductase NQU90_12250 PF07690 Major Facilitator Superfamily NQU90_12255 PF03600 Citrate transporter NQU90_12265 PF00005 ABC transporter NQU90_12270 PF12704 MacB-like periplasmic core domain NQU90_12270 PF02687 FtsX-like permease family NQU90_12285 PF00561 alpha/beta hydrolase fold NQU90_12305 PF01625 Peptide methionine sulfoxide reductase NQU90_12310 PF00583 Acetyltransferase (GNAT) family NQU90_12310 PF00696 Amino acid kinase family NQU90_12315 PF00696 Amino acid kinase family NQU90_12315 PF01842 ACT domain NQU90_12325 PF00884 Sulfatase NQU90_12335 PF01734 Patatin-like phospholipase NQU90_12340 PF17179 4Fe-4S dicluster domain NQU90_12345 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NQU90_12345 PF00175 Oxidoreductase NAD-binding domain NQU90_12350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NQU90_12350 PF13187 4Fe-4S dicluster domain NQU90_12350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NQU90_12355 PF10414 Sirohaem synthase dimerisation region NQU90_12355 PF14824 Sirohaem biosynthesis protein central NQU90_12355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQU90_12365 PF01906 Putative heavy-metal-binding NQU90_12370 PF05036 Sporulation related domain NQU90_12375 PF08245 Mur ligase middle domain NQU90_12375 PF02875 Mur ligase family, glutamate ligase domain NQU90_12380 PF17848 Acetyl-coA carboxylase zinc finger domain NQU90_12380 PF01039 Carboxyl transferase domain NQU90_12385 PF01416 tRNA pseudouridine synthase NQU90_12395 PF01118 Semialdehyde dehydrogenase, NAD binding domain NQU90_12395 PF02774 Semialdehyde dehydrogenase, dimerisation domain NQU90_12400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQU90_12400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQU90_12400 PF11890 Domain of unknown function (DUF3410) NQU90_12405 PF01569 PAP2 superfamily NQU90_12410 PF00929 Exonuclease NQU90_12415 PF03553 Na+/H+ antiporter family NQU90_12415 PF13726 Na+-H+ antiporter family NQU90_12420 PF00563 EAL domain NQU90_12420 PF03707 Bacterial signalling protein N terminal repeat NQU90_12420 PF13188 PAS domain NQU90_12420 PF00990 Diguanylate cyclase, GGDEF domain NQU90_12430 PF03880 DbpA RNA binding domain NQU90_12430 PF00270 DEAD/DEAH box helicase NQU90_12430 PF00271 Helicase conserved C-terminal domain NQU90_12435 PF03061 Thioesterase superfamily NQU90_12445 PF02913 FAD linked oxidases, C-terminal domain NQU90_12445 PF01565 FAD binding domain NQU90_12445 PF13183 4Fe-4S dicluster domain NQU90_12455 PF03471 Transporter associated domain NQU90_12455 PF03741 Integral membrane protein TerC family NQU90_12460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NQU90_12465 PF00107 Zinc-binding dehydrogenase NQU90_12465 PF08240 Alcohol dehydrogenase GroES-like domain NQU90_12470 PF00962 Adenosine/AMP deaminase NQU90_12475 PF13344 Haloacid dehalogenase-like hydrolase NQU90_12480 PF00999 Sodium/hydrogen exchanger family NQU90_12480 PF02254 TrkA-N domain NQU90_12490 PF00733 Asparagine synthase NQU90_12490 PF13537 Glutamine amidotransferase domain NQU90_12495 PF01609 Transposase DDE domain NQU90_12495 PF05598 Transposase domain (DUF772) NQU90_12505 PF03606 C4-dicarboxylate anaerobic carrier NQU90_12510 PF07687 Peptidase dimerisation domain NQU90_12510 PF01546 Peptidase family M20/M25/M40 NQU90_12515 PF03577 Peptidase family C69 NQU90_12520 PF14497 Glutathione S-transferase, C-terminal domain NQU90_12520 PF02798 Glutathione S-transferase, N-terminal domain NQU90_12530 PF04209 homogentisate 1,2-dioxygenase NQU90_12535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQU90_12545 PF00849 RNA pseudouridylate synthase NQU90_12550 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_12555 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_12560 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_12565 PF00005 ABC transporter NQU90_12570 PF03956 Lysine exporter LysO NQU90_12575 PF01979 Amidohydrolase family NQU90_12580 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_12585 PF04336 Acyl carrier protein phosphodiesterase NQU90_12595 PF03960 ArsC family NQU90_12600 PF00578 AhpC/TSA family NQU90_12605 PF01435 Peptidase family M48 NQU90_12605 PF07720 Tetratricopeptide repeat NQU90_12610 PF01206 Sulfurtransferase TusA NQU90_12615 PF01594 AI-2E family transporter NQU90_12625 PF00561 alpha/beta hydrolase fold NQU90_12630 PF03976 Polyphosphate kinase 2 (PPK2) NQU90_12635 PF08402 TOBE domain NQU90_12635 PF00005 ABC transporter NQU90_12640 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_12645 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_12645 PF14785 Maltose transport system permease protein MalF P2 domain NQU90_12650 PF01547 Bacterial extracellular solute-binding protein NQU90_12655 PF04245 37-kD nucleoid-associated bacterial protein NQU90_12660 PF07208 Protein of unknown function (DUF1414) NQU90_12665 PF11893 Domain of unknown function (DUF3413) NQU90_12665 PF00884 Sulfatase NQU90_12670 PF03180 NLPA lipoprotein NQU90_12675 PF00082 Subtilase family NQU90_12675 PF01483 Proprotein convertase P-domain NQU90_12685 PF02896 PEP-utilising enzyme, TIM barrel domain NQU90_12685 PF00391 PEP-utilising enzyme, mobile domain NQU90_12685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NQU90_12690 PF03618 Kinase/pyrophosphorylase NQU90_12700 PF00324 Amino acid permease NQU90_12720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_12720 PF08447 PAS fold NQU90_12725 PF02347 Glycine cleavage system P-protein NQU90_12730 PF01597 Glycine cleavage H-protein NQU90_12735 PF01571 Aminomethyltransferase folate-binding domain NQU90_12735 PF08669 Glycine cleavage T-protein C-terminal barrel domain NQU90_12740 PF01494 FAD binding domain NQU90_12745 PF01494 FAD binding domain NQU90_12750 PF03695 Uncharacterised protein family (UPF0149) NQU90_12755 PF05164 Cell division protein ZapA NQU90_12765 PF07690 Major Facilitator Superfamily NQU90_12770 PF02798 Glutathione S-transferase, N-terminal domain NQU90_12770 PF00043 Glutathione S-transferase, C-terminal domain NQU90_12780 PF00459 Inositol monophosphatase family NQU90_12785 PF02535 ZIP Zinc transporter NQU90_12790 PF01048 Phosphorylase superfamily NQU90_12800 PF01497 Periplasmic binding protein NQU90_12805 PF02719 Polysaccharide biosynthesis protein NQU90_12810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NQU90_12820 PF02348 Cytidylyltransferase NQU90_12825 PF00202 Aminotransferase class-III NQU90_12835 PF03102 NeuB family NQU90_12835 PF08666 SAF domain NQU90_12855 PF02561 Flagellar protein FliS NQU90_12860 PF02465 Flagellar hook-associated protein 2 N-terminus NQU90_12860 PF07196 Flagellin hook IN motif NQU90_12860 PF07195 Flagellar hook-associated protein 2 C-terminus NQU90_12870 PF07196 Flagellin hook IN motif NQU90_12870 PF00669 Bacterial flagellin N-terminal helical region NQU90_12870 PF00700 Bacterial flagellin C-terminal helical region NQU90_12880 PF00700 Bacterial flagellin C-terminal helical region NQU90_12880 PF07196 Flagellin hook IN motif NQU90_12880 PF00669 Bacterial flagellin N-terminal helical region NQU90_12885 PF03458 UPF0126 domain NQU90_12895 PF02568 Thiamine biosynthesis protein (ThiI) NQU90_12895 PF02926 THUMP domain NQU90_12905 PF00905 Penicillin binding protein transpeptidase domain NQU90_12905 PF06832 Penicillin-Binding Protein C-terminus Family NQU90_12905 PF00912 Transglycosylase NQU90_12910 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NQU90_12910 PF01835 MG2 domain NQU90_12910 PF07678 A-macroglobulin TED domain NQU90_12910 PF00207 Alpha-2-macroglobulin family NQU90_12910 PF07703 Alpha-2-macroglobulin bait region domain NQU90_12910 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NQU90_12910 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NQU90_12910 PF17962 Bacterial macroglobulin domain 6 NQU90_12910 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NQU90_12920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQU90_12920 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_12925 PF00563 EAL domain NQU90_12925 PF03707 Bacterial signalling protein N terminal repeat NQU90_12925 PF00990 Diguanylate cyclase, GGDEF domain NQU90_12930 PF04055 Radical SAM superfamily NQU90_12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_12945 PF05728 Uncharacterised protein family (UPF0227) NQU90_12950 PF00860 Permease family NQU90_12955 PF01432 Peptidase family M3 NQU90_12955 PF08439 Oligopeptidase F NQU90_12960 PF05661 Protein of unknown function (DUF808) NQU90_12975 PF00672 HAMP domain NQU90_12975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_12980 PF00375 Sodium:dicarboxylate symporter family NQU90_12995 PF01979 Amidohydrolase family NQU90_13005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_13005 PF00672 HAMP domain NQU90_13010 PF01230 HIT domain NQU90_13045 PF07549 SecD/SecF GG Motif NQU90_13045 PF13721 SecD export protein N-terminal TM region NQU90_13045 PF02355 Protein export membrane protein NQU90_13050 PF07549 SecD/SecF GG Motif NQU90_13050 PF02355 Protein export membrane protein NQU90_13055 PF00483 Nucleotidyl transferase NQU90_13060 PF00793 DAHP synthetase I family NQU90_13065 PF02153 Prephenate dehydrogenase NQU90_13065 PF01817 Chorismate mutase type II NQU90_13070 PF07759 Protein of unknown function (DUF1615) NQU90_13075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NQU90_13075 PF02142 MGS-like domain NQU90_13075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NQU90_13080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NQU90_13080 PF00117 Glutamine amidotransferase class-I NQU90_13085 PF05173 Dihydrodipicolinate reductase, C-terminus NQU90_13085 PF01113 Dihydrodipicolinate reductase, N-terminus NQU90_13100 PF01812 5-formyltetrahydrofolate cyclo-ligase family NQU90_13105 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NQU90_13110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQU90_13110 PF01842 ACT domain NQU90_13110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQU90_13115 PF01219 Prokaryotic diacylglycerol kinase NQU90_13120 PF00793 DAHP synthetase I family NQU90_13130 PF00005 ABC transporter NQU90_13135 PF01032 FecCD transport family NQU90_13150 PF00437 Type II/IV secretion system protein NQU90_13160 PF00842 Alanine racemase, C-terminal domain NQU90_13160 PF01168 Alanine racemase, N-terminal domain NQU90_13165 PF03741 Integral membrane protein TerC family NQU90_13170 PF00005 ABC transporter NQU90_13170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQU90_13175 PF00005 ABC transporter NQU90_13175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQU90_13180 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_13180 PF12911 N-terminal TM domain of oligopeptide transport permease C NQU90_13185 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_13190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_13195 PF01914 MarC family integral membrane protein NQU90_13200 PF00171 Aldehyde dehydrogenase family NQU90_13200 PF00465 Iron-containing alcohol dehydrogenase NQU90_13205 PF01709 Transcriptional regulator NQU90_13210 PF02938 GAD domain NQU90_13210 PF00152 tRNA synthetases class II (D, K and N) NQU90_13210 PF01336 OB-fold nucleic acid binding domain NQU90_13220 PF01904 Protein of unknown function DUF72 NQU90_13225 PF13649 Methyltransferase domain NQU90_13230 PF08003 Protein of unknown function (DUF1698) NQU90_13250 PF10417 C-terminal domain of 1-Cys peroxiredoxin NQU90_13250 PF00578 AhpC/TSA family NQU90_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_13255 PF03466 LysR substrate binding domain NQU90_13260 PF00877 NlpC/P60 family NQU90_13275 PF01609 Transposase DDE domain NQU90_13275 PF13808 DDE_Tnp_1-associated NQU90_13285 PF02447 GntP family permease NQU90_13290 PF00291 Pyridoxal-phosphate dependent enzyme NQU90_13300 PF00180 Isocitrate/isopropylmalate dehydrogenase NQU90_13305 PF12833 Helix-turn-helix domain NQU90_13310 PF01238 Phosphomannose isomerase type I NQU90_13320 PF01609 Transposase DDE domain NQU90_13320 PF05598 Transposase domain (DUF772) NQU90_13345 PF05656 Protein of unknown function (DUF805) NQU90_13355 PF00034 Cytochrome c NQU90_13355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NQU90_13365 PF01156 Inosine-uridine preferring nucleoside hydrolase NQU90_13375 PF00171 Aldehyde dehydrogenase family NQU90_13380 PF00440 Bacterial regulatory proteins, tetR family NQU90_13380 PF08359 YsiA-like protein, C-terminal region NQU90_13390 PF00465 Iron-containing alcohol dehydrogenase NQU90_13410 PF01554 MatE NQU90_13420 PF04325 Protein of unknown function (DUF465) NQU90_13430 PF13188 PAS domain NQU90_13430 PF00990 Diguanylate cyclase, GGDEF domain NQU90_13430 PF03707 Bacterial signalling protein N terminal repeat NQU90_13430 PF00563 EAL domain NQU90_13435 PF04337 Protein of unknown function, DUF480 NQU90_13445 PF00127 Copper binding proteins, plastocyanin/azurin family NQU90_13450 PF02424 ApbE family NQU90_13465 PF03372 Endonuclease/Exonuclease/phosphatase family NQU90_13470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_13475 PF00873 AcrB/AcrD/AcrF family NQU90_13490 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NQU90_13500 PF00529 HlyD membrane-fusion protein of T1SS NQU90_13500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_13505 PF00873 AcrB/AcrD/AcrF family NQU90_13515 PF01497 Periplasmic binding protein NQU90_13520 PF00005 ABC transporter NQU90_13525 PF01032 FecCD transport family NQU90_13530 PF01032 FecCD transport family NQU90_13535 PF00593 TonB dependent receptor NQU90_13535 PF07715 TonB-dependent Receptor Plug Domain NQU90_13540 PF04954 Siderophore-interacting protein NQU90_13540 PF08021 Siderophore-interacting FAD-binding domain NQU90_13545 PF11849 Domain of unknown function (DUF3369) NQU90_13555 PF00929 Exonuclease NQU90_13560 PF00075 RNase H NQU90_13565 PF08241 Methyltransferase domain NQU90_13570 PF16123 Hydroxyacylglutathione hydrolase C-terminus NQU90_13570 PF00753 Metallo-beta-lactamase superfamily NQU90_13575 PF01476 LysM domain NQU90_13575 PF01464 Transglycosylase SLT domain NQU90_13580 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NQU90_13590 PF05472 DNA replication terminus site-binding protein (Ter protein) NQU90_13595 PF04434 SWIM zinc finger NQU90_13595 PF00176 SNF2 family N-terminal domain NQU90_13595 PF00271 Helicase conserved C-terminal domain NQU90_13600 PF00672 HAMP domain NQU90_13600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_13600 PF00512 His Kinase A (phospho-acceptor) domain NQU90_13605 PF00072 Response regulator receiver domain NQU90_13605 PF00486 Transcriptional regulatory protein, C terminal NQU90_13610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_13610 PF00529 HlyD membrane-fusion protein of T1SS NQU90_13615 PF00873 AcrB/AcrD/AcrF family NQU90_13625 PF03734 L,D-transpeptidase catalytic domain NQU90_13625 PF01476 LysM domain NQU90_13625 PF17969 L,D-transpeptidase C-terminal domain NQU90_13635 PF00939 Sodium:sulfate symporter transmembrane region NQU90_13640 PF01575 MaoC like domain NQU90_13645 PF05971 RNA methyltransferase NQU90_13650 PF00877 NlpC/P60 family NQU90_13655 PF01648 4'-phosphopantetheinyl transferase superfamily NQU90_13660 PF00085 Thioredoxin NQU90_13670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NQU90_13675 PF01842 ACT domain NQU90_13675 PF00551 Formyl transferase NQU90_13685 PF13091 PLD-like domain NQU90_13685 PF13396 Phospholipase_D-nuclease N-terminal NQU90_13700 PF01551 Peptidase family M23 NQU90_13700 PF10145 Phage-related minor tail protein NQU90_13700 PF01464 Transglycosylase SLT domain NQU90_13705 PF00230 Major intrinsic protein NQU90_13715 PF00155 Aminotransferase class I and II NQU90_13720 PF03606 C4-dicarboxylate anaerobic carrier NQU90_13725 PF07055 Enoyl reductase FAD binding domain NQU90_13725 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NQU90_13725 PF12241 Trans-2-enoyl-CoA reductase catalytic region NQU90_13730 PF12729 Four helix bundle sensory module for signal transduction NQU90_13730 PF00672 HAMP domain NQU90_13730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_13735 PF00300 Histidine phosphatase superfamily (branch 1) NQU90_13740 PF08348 YheO-like PAS domain NQU90_13740 PF13309 HTH domain NQU90_13745 PF03313 Serine dehydratase alpha chain NQU90_13750 PF01042 Endoribonuclease L-PSP NQU90_13760 PF00672 HAMP domain NQU90_13760 PF12729 Four helix bundle sensory module for signal transduction NQU90_13760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_13775 PF17944 Arginine decarboxylase C-terminal helical extension NQU90_13775 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NQU90_13775 PF17810 Arginine decarboxylase helical bundle domain NQU90_13780 PF01546 Peptidase family M20/M25/M40 NQU90_13780 PF07687 Peptidase dimerisation domain NQU90_13795 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NQU90_13795 PF05221 S-adenosyl-L-homocysteine hydrolase NQU90_13805 PF04264 YceI-like domain NQU90_13810 PF03466 LysR substrate binding domain NQU90_13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_13820 PF01268 Formate--tetrahydrofolate ligase NQU90_13825 PF17200 Single Cache domain 2 NQU90_13825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_13825 PF00672 HAMP domain NQU90_13830 PF01227 GTP cyclohydrolase I NQU90_13835 PF03454 MoeA C-terminal region (domain IV) NQU90_13835 PF00994 Probable molybdopterin binding domain NQU90_13835 PF03453 MoeA N-terminal region (domain I and II) NQU90_13840 PF00899 ThiF family NQU90_13845 PF00561 alpha/beta hydrolase fold NQU90_13850 PF03459 TOBE domain NQU90_13850 PF00005 ABC transporter NQU90_13855 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_13865 PF02391 MoaE protein NQU90_13870 PF02597 ThiS family NQU90_13875 PF01967 MoaC family NQU90_13880 PF00994 Probable molybdopterin binding domain NQU90_13885 PF03264 NapC/NirT cytochrome c family, N-terminal region NQU90_13890 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NQU90_13895 PF12801 4Fe-4S binding domain NQU90_13895 PF13237 4Fe-4S dicluster domain NQU90_13900 PF12838 4Fe-4S dicluster domain NQU90_13900 PF12800 4Fe-4S binding domain NQU90_13905 PF00384 Molybdopterin oxidoreductase NQU90_13905 PF10518 TAT (twin-arginine translocation) pathway signal sequence NQU90_13905 PF01568 Molydopterin dinucleotide binding domain NQU90_13905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQU90_13915 PF13187 4Fe-4S dicluster domain NQU90_13915 PF12838 4Fe-4S dicluster domain NQU90_13920 PF04055 Radical SAM superfamily NQU90_13920 PF06463 Molybdenum Cofactor Synthesis C NQU90_13925 PF07730 Histidine kinase NQU90_13925 PF00672 HAMP domain NQU90_13925 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NQU90_13925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_13930 PF00072 Response regulator receiver domain NQU90_13930 PF00196 Bacterial regulatory proteins, luxR family NQU90_13940 PF09456 RcsC Alpha-Beta-Loop (ABL) NQU90_13940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_13940 PF00072 Response regulator receiver domain NQU90_13940 PF00512 His Kinase A (phospho-acceptor) domain NQU90_13950 PF01933 Uncharacterised protein family UPF0052 NQU90_13960 PF13230 Glutamine amidotransferases class-II NQU90_13965 PF13580 SIS domain NQU90_13970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NQU90_13970 PF09317 Domain of unknown function (DUF1974) NQU90_13970 PF02770 Acyl-CoA dehydrogenase, middle domain NQU90_13970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NQU90_13975 PF07687 Peptidase dimerisation domain NQU90_13975 PF01546 Peptidase family M20/M25/M40 NQU90_13980 PF03658 RnfH family Ubiquitin NQU90_13985 PF03364 Polyketide cyclase / dehydrase and lipid transport NQU90_13990 PF01668 SmpB protein NQU90_14000 PF13356 Arm DNA-binding domain NQU90_14000 PF00589 Phage integrase family NQU90_14015 PF05930 Prophage CP4-57 regulatory protein (AlpA) NQU90_14025 PF09588 YqaJ-like viral recombinase domain NQU90_14070 PF04002 RadC-like JAB domain NQU90_14115 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A NQU90_14120 PF04471 Restriction endonuclease NQU90_14120 PF14338 Mrr N-terminal domain NQU90_14130 PF11867 Domain of unknown function (DUF3387) NQU90_14130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQU90_14130 PF18766 SWI2/SNF2 ATPase NQU90_14150 PF12161 HsdM N-terminal domain NQU90_14150 PF02384 N-6 DNA Methylase NQU90_14165 PF00717 Peptidase S24-like NQU90_14205 PF05598 Transposase domain (DUF772) NQU90_14205 PF01609 Transposase DDE domain NQU90_14210 PF00529 HlyD membrane-fusion protein of T1SS NQU90_14210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_14215 PF00873 AcrB/AcrD/AcrF family NQU90_14220 PF02321 Outer membrane efflux protein NQU90_14225 PF00817 impB/mucB/samB family NQU90_14225 PF11799 impB/mucB/samB family C-terminal domain NQU90_14225 PF13438 Domain of unknown function (DUF4113) NQU90_14230 PF00512 His Kinase A (phospho-acceptor) domain NQU90_14230 PF09456 RcsC Alpha-Beta-Loop (ABL) NQU90_14230 PF00072 Response regulator receiver domain NQU90_14230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_14235 PF03707 Bacterial signalling protein N terminal repeat NQU90_14235 PF00990 Diguanylate cyclase, GGDEF domain NQU90_14235 PF00563 EAL domain NQU90_14240 PF12838 4Fe-4S dicluster domain NQU90_14240 PF00384 Molybdopterin oxidoreductase NQU90_14240 PF01568 Molydopterin dinucleotide binding domain NQU90_14240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NQU90_14240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQU90_14255 PF05930 Prophage CP4-57 regulatory protein (AlpA) NQU90_14320 PF04002 RadC-like JAB domain NQU90_14365 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A NQU90_14370 PF02384 N-6 DNA Methylase NQU90_14375 PF01420 Type I restriction modification DNA specificity domain NQU90_14380 PF12102 Domain of unknown function (DUF3578) NQU90_14380 PF07728 AAA domain (dynein-related subfamily) NQU90_14390 PF18766 SWI2/SNF2 ATPase NQU90_14390 PF11867 Domain of unknown function (DUF3387) NQU90_14390 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQU90_14405 PF00717 Peptidase S24-like NQU90_14445 PF05598 Transposase domain (DUF772) NQU90_14445 PF01609 Transposase DDE domain NQU90_14450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_14450 PF00529 HlyD membrane-fusion protein of T1SS NQU90_14455 PF00873 AcrB/AcrD/AcrF family NQU90_14460 PF02321 Outer membrane efflux protein NQU90_14465 PF00817 impB/mucB/samB family NQU90_14465 PF13438 Domain of unknown function (DUF4113) NQU90_14465 PF11799 impB/mucB/samB family C-terminal domain NQU90_14480 PF00440 Bacterial regulatory proteins, tetR family NQU90_14485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NQU90_14485 PF02770 Acyl-CoA dehydrogenase, middle domain NQU90_14485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NQU90_14485 PF09317 Domain of unknown function (DUF1974) NQU90_14500 PF02075 Crossover junction endodeoxyribonuclease RuvC NQU90_14505 PF02108 Flagellar assembly protein FliH NQU90_14510 PF06578 YOP proteins translocation protein K (YscK) NQU90_14515 PF01514 Secretory protein of YscJ/FliF family NQU90_14520 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI NQU90_14525 PF09025 YopR, type III needle-polymerisation regulator NQU90_14530 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) NQU90_14535 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF NQU90_14545 PF16697 Inner membrane component of T3SS, cytoplasmic domain NQU90_14545 PF16693 Inner membrane component of T3SS, periplasmic domain NQU90_14550 PF00263 Bacterial type II and III secretion system protein NQU90_14550 PF03958 Bacterial type II/III secretion system short domain NQU90_14555 PF05932 Tir chaperone protein (CesT) family NQU90_14560 PF16806 Antiactivator protein ExsD NQU90_14565 PF12833 Helix-turn-helix domain NQU90_14570 PF09619 Type III secretion system lipoprotein chaperone (YscW) NQU90_14580 PF05932 Tir chaperone protein (CesT) family NQU90_14585 PF05844 YopD protein NQU90_14590 PF04888 Secretion system effector C (SseC) like family NQU90_14595 PF07720 Tetratricopeptide repeat NQU90_14600 PF04792 V antigen (LcrV) protein NQU90_14605 PF07216 LcrG protein NQU90_14610 PF09621 Type III secretion system regulator (LcrR) NQU90_14615 PF00771 FHIPEP family NQU90_14625 PF09474 Type III secretion system YscX (type_III_YscX) NQU90_14635 PF09059 TyeA NQU90_14640 PF07201 HrpJ-like domain NQU90_14645 PF18269 T3SS EscN ATPase C-terminal domain NQU90_14645 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQU90_14645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQU90_14655 PF02120 Flagellar hook-length control protein FliK NQU90_14660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NQU90_14665 PF00813 FliP family NQU90_14670 PF01313 Bacterial export proteins, family 3 NQU90_14675 PF01311 Bacterial export proteins, family 1 NQU90_14680 PF01312 FlhB HrpN YscU SpaS Family NQU90_14685 PF03496 ADP-ribosyltransferase exoenzyme NQU90_14695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NQU90_14695 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_14700 PF13411 MerR HTH family regulatory protein NQU90_14715 PF14821 Threonine synthase N terminus NQU90_14715 PF00291 Pyridoxal-phosphate dependent enzyme NQU90_14720 PF08544 GHMP kinases C terminal NQU90_14720 PF00288 GHMP kinases N terminal domain NQU90_14725 PF03447 Homoserine dehydrogenase, NAD binding domain NQU90_14725 PF00742 Homoserine dehydrogenase NQU90_14725 PF01842 ACT domain NQU90_14725 PF00696 Amino acid kinase family NQU90_14725 PF13840 ACT domain NQU90_14730 PF00588 SpoU rRNA Methylase family NQU90_14735 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NQU90_14745 PF00849 RNA pseudouridylate synthase NQU90_14745 PF01479 S4 domain NQU90_14750 PF04079 Segregation and condensation complex subunit ScpB NQU90_14755 PF02616 Segregation and condensation protein ScpA NQU90_14760 PF01300 Telomere recombination NQU90_14765 PF02811 PHP domain NQU90_14770 PF04715 Anthranilate synthase component I, N terminal region NQU90_14770 PF00425 chorismate binding enzyme NQU90_14775 PF00117 Glutamine amidotransferase class-I NQU90_14775 PF00591 Glycosyl transferase family, a/b domain NQU90_14775 PF02885 Glycosyl transferase family, helical bundle domain NQU90_14780 PF02885 Glycosyl transferase family, helical bundle domain NQU90_14780 PF00591 Glycosyl transferase family, a/b domain NQU90_14785 PF00218 Indole-3-glycerol phosphate synthase NQU90_14785 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NQU90_14790 PF00291 Pyridoxal-phosphate dependent enzyme NQU90_14795 PF00290 Tryptophan synthase alpha chain NQU90_14805 PF01609 Transposase DDE domain NQU90_14805 PF05598 Transposase domain (DUF772) NQU90_14815 PF01609 Transposase DDE domain NQU90_14815 PF05598 Transposase domain (DUF772) NQU90_14820 PF04307 LexA-binding, inner membrane-associated putative hydrolase NQU90_14840 PF07662 Na+ dependent nucleoside transporter C-terminus NQU90_14840 PF01773 Na+ dependent nucleoside transporter N-terminus NQU90_14840 PF07670 Nucleoside recognition NQU90_14845 PF03960 ArsC family NQU90_14850 PF01758 Sodium Bile acid symporter family NQU90_14855 PF02374 Anion-transporting ATPase NQU90_14860 PF06953 Arsenical resistance operon trans-acting repressor ArsD NQU90_14880 PF03737 Aldolase/RraA NQU90_14890 PF00072 Response regulator receiver domain NQU90_14890 PF00486 Transcriptional regulatory protein, C terminal NQU90_14905 PF00664 ABC transporter transmembrane region NQU90_14905 PF00005 ABC transporter NQU90_14910 PF00005 ABC transporter NQU90_14910 PF00664 ABC transporter transmembrane region NQU90_14930 PF01980 tRNA-methyltransferase O NQU90_14930 PF18389 TrmO C-terminal domain NQU90_14935 PF01292 Prokaryotic cytochrome b561 NQU90_14945 PF00072 Response regulator receiver domain NQU90_14945 PF00486 Transcriptional regulatory protein, C terminal NQU90_14950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_14955 PF03350 Uncharacterized protein family, UPF0114 NQU90_14970 PF01266 FAD dependent oxidoreductase NQU90_14975 PF07883 Cupin domain NQU90_14975 PF01381 Helix-turn-helix NQU90_14980 PF00171 Aldehyde dehydrogenase family NQU90_14985 PF00202 Aminotransferase class-III NQU90_14990 PF00324 Amino acid permease NQU90_15000 PF00324 Amino acid permease NQU90_15010 PF02690 Na+/Pi-cotransporter NQU90_15015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NQU90_15015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NQU90_15025 PF04381 Putative exonuclease, RdgC NQU90_15035 PF12320 Type 5 capsule protein repressor C-terminal domain NQU90_15035 PF00149 Calcineurin-like phosphoesterase NQU90_15040 PF13476 AAA domain NQU90_15045 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NQU90_15055 PF00224 Pyruvate kinase, barrel domain NQU90_15055 PF02887 Pyruvate kinase, alpha/beta domain NQU90_15060 PF00924 Mechanosensitive ion channel NQU90_15060 PF12795 Mechanosensitive ion channel porin domain NQU90_15060 PF12794 Mechanosensitive ion channel inner membrane domain 1 NQU90_15070 PF05649 Peptidase family M13 NQU90_15070 PF01431 Peptidase family M13 NQU90_15075 PF00990 Diguanylate cyclase, GGDEF domain NQU90_15080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NQU90_15085 PF00391 PEP-utilising enzyme, mobile domain NQU90_15085 PF05524 PEP-utilising enzyme, N-terminal NQU90_15085 PF02896 PEP-utilising enzyme, TIM barrel domain NQU90_15090 PF00381 PTS HPr component phosphorylation site NQU90_15095 PF00291 Pyridoxal-phosphate dependent enzyme NQU90_15100 PF00004 ATPase family associated with various cellular activities (AAA) NQU90_15100 PF17862 AAA+ lid domain NQU90_15100 PF01434 Peptidase family M41 NQU90_15110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NQU90_15110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NQU90_15115 PF00672 HAMP domain NQU90_15115 PF01966 HD domain NQU90_15120 PF13401 AAA domain NQU90_15120 PF01471 Putative peptidoglycan binding domain NQU90_15125 PF16537 Type II secretion system protein B NQU90_15130 PF11356 Type II secretion system protein C NQU90_15135 PF00263 Bacterial type II and III secretion system protein NQU90_15135 PF03958 Bacterial type II/III secretion system short domain NQU90_15140 PF00437 Type II/IV secretion system protein NQU90_15145 PF00482 Type II secretion system (T2SS), protein F NQU90_15150 PF07963 Prokaryotic N-terminal methylation motif NQU90_15150 PF08334 Type II secretion system (T2SS), protein G NQU90_15155 PF12019 Type II transport protein GspH NQU90_15155 PF07963 Prokaryotic N-terminal methylation motif NQU90_15160 PF02501 Type II secretion system (T2SS), protein I NQU90_15160 PF07963 Prokaryotic N-terminal methylation motif NQU90_15170 PF03934 Type II secretion system (T2SS), protein K NQU90_15175 PF05134 Type II secretion system (T2SS), protein L NQU90_15175 PF12693 GspL periplasmic domain NQU90_15180 PF04612 Type II secretion system (T2SS), protein M NQU90_15185 PF01203 Type II secretion system (T2SS), protein N NQU90_15195 PF01027 Inhibitor of apoptosis-promoting Bax1 NQU90_15200 PF12805 FUSC-like inner membrane protein yccS NQU90_15205 PF04358 DsrC like protein NQU90_15210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQU90_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_15215 PF03466 LysR substrate binding domain NQU90_15240 PF11842 Domain of unknown function (DUF3362) NQU90_15240 PF04055 Radical SAM superfamily NQU90_15240 PF08497 Radical SAM N-terminal NQU90_15245 PF00873 AcrB/AcrD/AcrF family NQU90_15250 PF00529 HlyD membrane-fusion protein of T1SS NQU90_15250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_15260 PF17158 Membrane-associated sensor, integral membrane domain NQU90_15260 PF00990 Diguanylate cyclase, GGDEF domain NQU90_15265 PF01734 Patatin-like phospholipase NQU90_15270 PF13520 Amino acid permease NQU90_15285 PF00691 OmpA family NQU90_15285 PF01389 OmpA-like transmembrane domain NQU90_15290 PF01389 OmpA-like transmembrane domain NQU90_15290 PF00691 OmpA family NQU90_15295 PF00390 Malic enzyme, N-terminal domain NQU90_15295 PF03949 Malic enzyme, NAD binding domain NQU90_15300 PF12833 Helix-turn-helix domain NQU90_15305 PF01554 MatE NQU90_15310 PF10692 Protein of unknown function (DUF2498) NQU90_15315 PF00990 Diguanylate cyclase, GGDEF domain NQU90_15320 PF00860 Permease family NQU90_15330 PF01235 Sodium:alanine symporter family NQU90_15335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NQU90_15335 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NQU90_15340 PF01699 Sodium/calcium exchanger protein NQU90_15345 PF08534 Redoxin NQU90_15355 PF00293 NUDIX domain NQU90_15370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NQU90_15370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NQU90_15375 PF03932 CutC family NQU90_15380 PF00480 ROK family NQU90_15390 PF01435 Peptidase family M48 NQU90_15395 PF12849 PBP superfamily domain NQU90_15400 PF00512 His Kinase A (phospho-acceptor) domain NQU90_15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_15400 PF00989 PAS fold NQU90_15400 PF11808 Phosphate regulon sensor protein PhoR NQU90_15405 PF00072 Response regulator receiver domain NQU90_15405 PF00486 Transcriptional regulatory protein, C terminal NQU90_15410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQU90_15415 PF01590 GAF domain NQU90_15415 PF02954 Bacterial regulatory protein, Fis family NQU90_15415 PF00158 Sigma-54 interaction domain NQU90_15420 PF00171 Aldehyde dehydrogenase family NQU90_15430 PF00892 EamA-like transporter family NQU90_15435 PF12431 Transcriptional regulator NQU90_15435 PF00072 Response regulator receiver domain NQU90_15440 PF00989 PAS fold NQU90_15440 PF17203 Single cache domain 3 NQU90_15440 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NQU90_15440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_15445 PF00390 Malic enzyme, N-terminal domain NQU90_15445 PF03949 Malic enzyme, NAD binding domain NQU90_15460 PF01047 MarR family NQU90_15465 PF00529 HlyD membrane-fusion protein of T1SS NQU90_15465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_15495 PF01679 Proteolipid membrane potential modulator NQU90_15505 PF03477 ATP cone domain NQU90_15505 PF13597 Anaerobic ribonucleoside-triphosphate reductase NQU90_15515 PF00533 BRCA1 C Terminus (BRCT) domain NQU90_15515 PF12826 Helix-hairpin-helix motif NQU90_15515 PF01653 NAD-dependent DNA ligase adenylation domain NQU90_15515 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NQU90_15515 PF03120 NAD-dependent DNA ligase OB-fold domain NQU90_15520 PF04354 ZipA, C-terminal FtsZ-binding domain NQU90_15525 PF06470 SMC proteins Flexible Hinge Domain NQU90_15525 PF02463 RecF/RecN/SMC N terminal domain NQU90_15535 PF03458 UPF0126 domain NQU90_15545 PF05951 Bacterial protein of unknown function (DUF882) NQU90_15550 PF01471 Putative peptidoglycan binding domain NQU90_15550 PF03734 L,D-transpeptidase catalytic domain NQU90_15565 PF00535 Glycosyl transferase family 2 NQU90_15580 PF00128 Alpha amylase, catalytic domain NQU90_15590 PF00196 Bacterial regulatory proteins, luxR family NQU90_15590 PF00072 Response regulator receiver domain NQU90_15610 PF02254 TrkA-N domain NQU90_15610 PF02080 TrkA-C domain NQU90_15610 PF00999 Sodium/hydrogen exchanger family NQU90_15615 PF00990 Diguanylate cyclase, GGDEF domain NQU90_15620 PF11734 TilS substrate C-terminal domain NQU90_15620 PF09179 TilS substrate binding domain NQU90_15620 PF01171 PP-loop family NQU90_15625 PF01431 Peptidase family M13 NQU90_15625 PF05649 Peptidase family M13 NQU90_15635 PF08543 Phosphomethylpyrimidine kinase NQU90_15640 PF01276 Orn/Lys/Arg decarboxylase, major domain NQU90_15640 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NQU90_15640 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NQU90_15645 PF13520 Amino acid permease NQU90_15650 PF18500 CadC C-terminal domain 1 NQU90_15650 PF00486 Transcriptional regulatory protein, C terminal NQU90_15655 PF13520 Amino acid permease NQU90_15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_15660 PF03466 LysR substrate binding domain NQU90_15665 PF12706 Beta-lactamase superfamily domain NQU90_15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_15680 PF03466 LysR substrate binding domain NQU90_15690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQU90_15690 PF00205 Thiamine pyrophosphate enzyme, central domain NQU90_15690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NQU90_15695 PF03306 Alpha-acetolactate decarboxylase NQU90_15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_15700 PF03466 LysR substrate binding domain NQU90_15705 PF00579 tRNA synthetases class I (W and Y) NQU90_15710 PF01476 LysM domain NQU90_15710 PF08525 Opacity-associated protein A N-terminal motif NQU90_15710 PF01551 Peptidase family M23 NQU90_15715 PF03702 Anhydro-N-acetylmuramic acid kinase NQU90_15730 PF13808 DDE_Tnp_1-associated NQU90_15730 PF01609 Transposase DDE domain NQU90_15735 PF01042 Endoribonuclease L-PSP NQU90_15745 PF01965 DJ-1/PfpI family NQU90_15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_15750 PF03466 LysR substrate binding domain NQU90_15755 PF00698 Acyl transferase domain NQU90_15755 PF08240 Alcohol dehydrogenase GroES-like domain NQU90_15755 PF16197 Ketoacyl-synthetase C-terminal extension NQU90_15755 PF00109 Beta-ketoacyl synthase, N-terminal domain NQU90_15755 PF02801 Beta-ketoacyl synthase, C-terminal domain NQU90_15755 PF08659 KR domain NQU90_15755 PF00550 Phosphopantetheine attachment site NQU90_15755 PF14765 Polyketide synthase dehydratase NQU90_15765 PF00456 Transketolase, thiamine diphosphate binding domain NQU90_15765 PF02780 Transketolase, C-terminal domain NQU90_15765 PF02779 Transketolase, pyrimidine binding domain NQU90_15770 PF02773 S-adenosylmethionine synthetase, C-terminal domain NQU90_15770 PF02772 S-adenosylmethionine synthetase, central domain NQU90_15770 PF00438 S-adenosylmethionine synthetase, N-terminal domain NQU90_15775 PF10263 SprT-like family NQU90_15775 PF17283 SprT-like zinc ribbon domain NQU90_15780 PF04231 Endonuclease I NQU90_15785 PF04452 RNA methyltransferase NQU90_15790 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NQU90_15790 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NQU90_15795 PF02622 Uncharacterized ACR, COG1678 NQU90_15800 PF03652 Holliday junction resolvase NQU90_15805 PF00854 POT family NQU90_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_15810 PF03466 LysR substrate binding domain NQU90_15815 PF07690 Major Facilitator Superfamily NQU90_15820 PF07726 ATPase family associated with various cellular activities (AAA) NQU90_15820 PF17863 AAA lid domain NQU90_15830 PF11992 Domain of unknown function (DUF3488) NQU90_15830 PF13559 Domain of unknown function (DUF4129) NQU90_15830 PF01841 Transglutaminase-like superfamily NQU90_15835 PF01235 Sodium:alanine symporter family NQU90_15840 PF00923 Transaldolase/Fructose-6-phosphate aldolase NQU90_15850 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NQU90_15855 PF07733 Bacterial DNA polymerase III alpha NTPase domain NQU90_15855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NQU90_15855 PF14579 Helix-hairpin-helix motif NQU90_15855 PF02811 PHP domain NQU90_15855 PF01336 OB-fold nucleic acid binding domain NQU90_15860 PF01351 Ribonuclease HII NQU90_15865 PF02684 Lipid-A-disaccharide synthetase NQU90_15870 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NQU90_15870 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_15875 PF07977 FabA-like domain NQU90_15880 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_15880 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NQU90_15885 PF03938 Outer membrane protein (OmpH-like) NQU90_15890 PF01103 Surface antigen NQU90_15890 PF07244 Surface antigen variable number repeat NQU90_15895 PF17820 PDZ domain NQU90_15895 PF02163 Peptidase family M50 NQU90_15900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NQU90_15900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NQU90_15900 PF13288 DXP reductoisomerase C-terminal domain NQU90_15910 PF01255 Putative undecaprenyl diphosphate synthase NQU90_15915 PF01765 Ribosome recycling factor NQU90_15920 PF00696 Amino acid kinase family NQU90_15925 PF00889 Elongation factor TS NQU90_15930 PF00318 Ribosomal protein S2 NQU90_15935 PF00557 Metallopeptidase family M24 NQU90_15940 PF01842 ACT domain NQU90_15940 PF08335 GlnD PII-uridylyltransferase NQU90_15940 PF01966 HD domain NQU90_15940 PF01909 Nucleotidyltransferase domain NQU90_15945 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_15945 PF14602 Hexapeptide repeat of succinyl-transferase NQU90_15945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NQU90_15950 PF11944 Protein of unknown function (DUF3461) NQU90_15955 PF02378 Phosphotransferase system, EIIC NQU90_15955 PF00367 phosphotransferase system, EIIB NQU90_15975 PF00128 Alpha amylase, catalytic domain NQU90_15975 PF16657 Maltogenic Amylase, C-terminal domain NQU90_15980 PF00128 Alpha amylase, catalytic domain NQU90_15980 PF02903 Alpha amylase, N-terminal ig-like domain NQU90_15980 PF16657 Maltogenic Amylase, C-terminal domain NQU90_15985 PF00258 Flavodoxin NQU90_15990 PF00849 RNA pseudouridylate synthase NQU90_15995 PF04287 tRNA pseudouridine synthase C NQU90_16020 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NQU90_16025 PF07348 Syd protein (SUKH-2) NQU90_16030 PF14489 QueF-like protein NQU90_16030 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NQU90_16040 PF00990 Diguanylate cyclase, GGDEF domain NQU90_16045 PF11892 Domain of unknown function (DUF3412) NQU90_16045 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NQU90_16045 PF03641 Possible lysine decarboxylase NQU90_16050 PF01367 5'-3' exonuclease, C-terminal SAM fold NQU90_16050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NQU90_16055 PF00180 Isocitrate/isopropylmalate dehydrogenase NQU90_16055 PF18324 Hypothetical protein TT1725 NQU90_16065 PF01728 FtsJ-like methyltransferase NQU90_16065 PF18125 RlmM ferredoxin-like domain NQU90_16070 PF04241 Protein of unknown function (DUF423) NQU90_16080 PF03466 LysR substrate binding domain NQU90_16080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_16085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_16085 PF00672 HAMP domain NQU90_16090 PF11799 impB/mucB/samB family C-terminal domain NQU90_16090 PF11798 IMS family HHH motif NQU90_16090 PF00817 impB/mucB/samB family NQU90_16100 PF01965 DJ-1/PfpI family NQU90_16105 PF02558 Ketopantoate reductase PanE/ApbA NQU90_16105 PF08546 Ketopantoate reductase PanE/ApbA C terminal NQU90_16110 PF04461 Protein of unknown function (DUF520) NQU90_16115 PF03502 Nucleoside-specific channel-forming protein, Tsx NQU90_16120 PF07690 Major Facilitator Superfamily NQU90_16125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NQU90_16135 PF05175 Methyltransferase small domain NQU90_16140 PF01722 BolA-like protein NQU90_16145 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NQU90_16145 PF11973 NQRA C-terminal domain NQU90_16150 PF03116 NQR2, RnfD, RnfE family NQU90_16155 PF04205 FMN-binding domain NQU90_16160 PF02508 Rnf-Nqr subunit, membrane protein NQU90_16165 PF02508 Rnf-Nqr subunit, membrane protein NQU90_16170 PF00970 Oxidoreductase FAD-binding domain NQU90_16170 PF00175 Oxidoreductase NAD-binding domain NQU90_16170 PF00111 2Fe-2S iron-sulfur cluster binding domain NQU90_16175 PF02424 ApbE family NQU90_16220 PF00106 short chain dehydrogenase NQU90_16230 PF00875 DNA photolyase NQU90_16230 PF03441 FAD binding domain of DNA photolyase NQU90_16235 PF13411 MerR HTH family regulatory protein NQU90_16240 PF08349 Protein of unknown function (DUF1722) NQU90_16255 PF06508 Queuosine biosynthesis protein QueC NQU90_16270 PF00800 Prephenate dehydratase NQU90_16270 PF01817 Chorismate mutase type II NQU90_16290 PF01609 Transposase DDE domain NQU90_16290 PF13808 DDE_Tnp_1-associated NQU90_16295 PF01609 Transposase DDE domain NQU90_16295 PF05598 Transposase domain (DUF772) NQU90_16310 PF05598 Transposase domain (DUF772) NQU90_16310 PF01609 Transposase DDE domain NQU90_16320 PF01695 IstB-like ATP binding protein NQU90_16325 PF00665 Integrase core domain NQU90_16325 PF02796 Helix-turn-helix domain of resolvase NQU90_16335 PF00672 HAMP domain NQU90_16335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_16340 PF05598 Transposase domain (DUF772) NQU90_16340 PF01609 Transposase DDE domain NQU90_16345 PF00072 Response regulator receiver domain NQU90_16345 PF00196 Bacterial regulatory proteins, luxR family NQU90_16350 PF13185 GAF domain NQU90_16350 PF00990 Diguanylate cyclase, GGDEF domain NQU90_16360 PF13185 GAF domain NQU90_16360 PF00990 Diguanylate cyclase, GGDEF domain NQU90_16370 PF01548 Transposase NQU90_16370 PF02371 Transposase IS116/IS110/IS902 family NQU90_16375 PF05598 Transposase domain (DUF772) NQU90_16375 PF01609 Transposase DDE domain NQU90_16395 PF00498 FHA domain NQU90_16395 PF00990 Diguanylate cyclase, GGDEF domain NQU90_16395 PF00563 EAL domain NQU90_16400 PF17158 Membrane-associated sensor, integral membrane domain NQU90_16400 PF00990 Diguanylate cyclase, GGDEF domain NQU90_16415 PF09588 YqaJ-like viral recombinase domain NQU90_16460 PF04002 RadC-like JAB domain NQU90_16510 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A NQU90_16515 PF04471 Restriction endonuclease NQU90_16515 PF14338 Mrr N-terminal domain NQU90_16525 PF11867 Domain of unknown function (DUF3387) NQU90_16525 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQU90_16525 PF18766 SWI2/SNF2 ATPase NQU90_16535 PF02463 RecF/RecN/SMC N terminal domain NQU90_16545 PF00580 UvrD/REP helicase N-terminal domain NQU90_16545 PF13361 UvrD-like helicase C-terminal domain NQU90_16555 PF01420 Type I restriction modification DNA specificity domain NQU90_16560 PF02384 N-6 DNA Methylase NQU90_16560 PF12161 HsdM N-terminal domain NQU90_16575 PF00717 Peptidase S24-like NQU90_16615 PF01609 Transposase DDE domain NQU90_16615 PF05598 Transposase domain (DUF772) NQU90_16620 PF00529 HlyD membrane-fusion protein of T1SS NQU90_16620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_16625 PF00873 AcrB/AcrD/AcrF family NQU90_16630 PF02321 Outer membrane efflux protein NQU90_16635 PF13438 Domain of unknown function (DUF4113) NQU90_16635 PF00817 impB/mucB/samB family NQU90_16635 PF11799 impB/mucB/samB family C-terminal domain NQU90_16640 PF02661 Fic/DOC family NQU90_16640 PF12728 Helix-turn-helix domain NQU90_16670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_16675 PF13609 Gram-negative porin NQU90_16685 PF00106 short chain dehydrogenase NQU90_16710 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NQU90_16740 PF07963 Prokaryotic N-terminal methylation motif NQU90_16740 PF00114 Pilin (bacterial filament) NQU90_16745 PF00730 HhH-GPD superfamily base excision DNA repair protein NQU90_16745 PF12833 Helix-turn-helix domain NQU90_16745 PF06029 AlkA N-terminal domain NQU90_16745 PF02805 Metal binding domain of Ada NQU90_16750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NQU90_16750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NQU90_16755 PF12392 Collagenase NQU90_16755 PF01136 Peptidase family U32 NQU90_16760 PF01810 LysE type translocator NQU90_16765 PF03466 LysR substrate binding domain NQU90_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_16770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NQU90_16770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NQU90_16775 PF00672 HAMP domain NQU90_16775 PF02743 Cache domain NQU90_16775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_16780 PF00072 Response regulator receiver domain NQU90_16790 PF01584 CheW-like domain NQU90_16790 PF02895 Signal transducing histidine kinase, homodimeric domain NQU90_16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_16790 PF01627 Hpt domain NQU90_16790 PF07194 P2 response regulator binding domain NQU90_16795 PF00672 HAMP domain NQU90_16795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_16795 PF12729 Four helix bundle sensory module for signal transduction NQU90_16800 PF01584 CheW-like domain NQU90_16805 PF00672 HAMP domain NQU90_16805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_16810 PF03705 CheR methyltransferase, all-alpha domain NQU90_16810 PF01739 CheR methyltransferase, SAM binding domain NQU90_16815 PF03975 CheD chemotactic sensory transduction NQU90_16820 PF01339 CheB methylesterase NQU90_16820 PF00072 Response regulator receiver domain NQU90_16825 PF00013 KH domain NQU90_16825 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NQU90_16825 PF01138 3' exoribonuclease family, domain 1 NQU90_16825 PF03725 3' exoribonuclease family, domain 2 NQU90_16825 PF00575 S1 RNA binding domain NQU90_16830 PF00312 Ribosomal protein S15 NQU90_16835 PF09157 Pseudouridine synthase II TruB, C-terminal NQU90_16835 PF16198 tRNA pseudouridylate synthase B C-terminal domain NQU90_16835 PF01509 TruB family pseudouridylate synthase (N terminal domain) NQU90_16840 PF02033 Ribosome-binding factor A NQU90_16845 PF00009 Elongation factor Tu GTP binding domain NQU90_16845 PF11987 Translation-initiation factor 2 NQU90_16845 PF08364 Bacterial translation initiation factor IF-2 associated region NQU90_16845 PF04760 Translation initiation factor IF-2, N-terminal region NQU90_16850 PF13184 NusA-like KH domain NQU90_16850 PF08529 NusA N-terminal domain NQU90_16850 PF00575 S1 RNA binding domain NQU90_16855 PF17384 RimP C-terminal SH3 domain NQU90_16855 PF02576 RimP N-terminal domain NQU90_16870 PF03840 Preprotein translocase SecG subunit NQU90_16875 PF00121 Triosephosphate isomerase NQU90_16880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NQU90_16880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NQU90_16880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NQU90_16880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NQU90_16885 PF00809 Pterin binding enzyme NQU90_16890 PF01434 Peptidase family M41 NQU90_16890 PF06480 FtsH Extracellular NQU90_16890 PF00004 ATPase family associated with various cellular activities (AAA) NQU90_16890 PF17862 AAA+ lid domain NQU90_16895 PF01728 FtsJ-like methyltransferase NQU90_16900 PF01985 CRS1 / YhbY (CRM) domain NQU90_16910 PF01272 Transcription elongation factor, GreA/GreB, C-term NQU90_16910 PF03449 Transcription elongation factor, N-terminal NQU90_16915 PF13677 Membrane MotB of proton-channel complex MotA/MotB NQU90_16915 PF00691 OmpA family NQU90_16920 PF01618 MotA/TolQ/ExbB proton channel family NQU90_16925 PF02609 Exonuclease VII small subunit NQU90_16930 PF00348 Polyprenyl synthetase NQU90_16935 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQU90_16935 PF02779 Transketolase, pyrimidine binding domain NQU90_16935 PF02780 Transketolase, C-terminal domain NQU90_16945 PF00149 Calcineurin-like phosphoesterase NQU90_16945 PF02872 5'-nucleotidase, C-terminal domain NQU90_16950 PF01609 Transposase DDE domain NQU90_16950 PF13808 DDE_Tnp_1-associated NQU90_16975 PF02954 Bacterial regulatory protein, Fis family NQU90_16975 PF00072 Response regulator receiver domain NQU90_16975 PF00158 Sigma-54 interaction domain NQU90_16980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NQU90_16980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NQU90_16990 PF04102 SlyX NQU90_16995 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_16995 PF12911 N-terminal TM domain of oligopeptide transport permease C NQU90_17000 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_17005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQU90_17010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQU90_17010 PF00005 ABC transporter NQU90_17015 PF04608 Phosphatidylglycerophosphatase A NQU90_17020 PF00586 AIR synthase related protein, N-terminal domain NQU90_17020 PF02769 AIR synthase related protein, C-terminal domain NQU90_17025 PF01029 NusB family NQU90_17030 PF00885 6,7-dimethyl-8-ribityllumazine synthase NQU90_17035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NQU90_17035 PF00925 GTP cyclohydrolase II NQU90_17040 PF00677 Lumazine binding domain NQU90_17045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NQU90_17045 PF01872 RibD C-terminal domain NQU90_17050 PF03477 ATP cone domain NQU90_17055 PF00464 Serine hydroxymethyltransferase NQU90_17065 PF00672 HAMP domain NQU90_17065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_17065 PF00512 His Kinase A (phospho-acceptor) domain NQU90_17065 PF01627 Hpt domain NQU90_17065 PF00072 Response regulator receiver domain NQU90_17070 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NQU90_17080 PF00072 Response regulator receiver domain NQU90_17080 PF00486 Transcriptional regulatory protein, C terminal NQU90_17085 PF03264 NapC/NirT cytochrome c family, N-terminal region NQU90_17090 PF01568 Molydopterin dinucleotide binding domain NQU90_17090 PF00384 Molybdopterin oxidoreductase NQU90_17090 PF18364 Molybdopterin oxidoreductase N-terminal domain NQU90_17095 PF02613 Nitrate reductase delta subunit NQU90_17105 PF03707 Bacterial signalling protein N terminal repeat NQU90_17105 PF00990 Diguanylate cyclase, GGDEF domain NQU90_17105 PF00563 EAL domain NQU90_17115 PF16177 Acetyl-coenzyme A synthetase N-terminus NQU90_17115 PF00501 AMP-binding enzyme NQU90_17115 PF13193 AMP-binding enzyme C-terminal domain NQU90_17120 PF01220 Dehydroquinase class II NQU90_17125 PF00364 Biotin-requiring enzyme NQU90_17130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NQU90_17130 PF02785 Biotin carboxylase C-terminal domain NQU90_17130 PF00289 Biotin carboxylase, N-terminal domain NQU90_17135 PF06196 Protein of unknown function (DUF997) NQU90_17140 PF00474 Sodium:solute symporter family NQU90_17145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NQU90_17145 PF00367 phosphotransferase system, EIIB NQU90_17145 PF02378 Phosphotransferase system, EIIC NQU90_17150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_17150 PF03466 LysR substrate binding domain NQU90_17155 PF00107 Zinc-binding dehydrogenase NQU90_17155 PF08240 Alcohol dehydrogenase GroES-like domain NQU90_17165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQU90_17165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQU90_17170 PF12464 Maltose acetyltransferase NQU90_17170 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_17175 PF00881 Nitroreductase family NQU90_17180 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_17180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NQU90_17185 PF01343 Peptidase family S49 NQU90_17190 PF17969 L,D-transpeptidase C-terminal domain NQU90_17190 PF03734 L,D-transpeptidase catalytic domain NQU90_17195 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_17200 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_17200 PF12911 N-terminal TM domain of oligopeptide transport permease C NQU90_17210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQU90_17210 PF00005 ABC transporter NQU90_17215 PF00005 ABC transporter NQU90_17215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQU90_17225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NQU90_17225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NQU90_17225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NQU90_17230 PF01370 NAD dependent epimerase/dehydratase family NQU90_17235 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) NQU90_17245 PF01464 Transglycosylase SLT domain NQU90_17260 PF00005 ABC transporter NQU90_17260 PF12848 ABC transporter NQU90_17270 PF00860 Permease family NQU90_17275 PF00749 tRNA synthetases class I (E and Q), catalytic domain NQU90_17280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_17280 PF00672 HAMP domain NQU90_17290 PF00313 'Cold-shock' DNA-binding domain NQU90_17330 PF00929 Exonuclease NQU90_17335 PF03193 RsgA GTPase NQU90_17340 PF02666 Phosphatidylserine decarboxylase NQU90_17345 PF09905 DNA-binding protein VF530 NQU90_17360 PF00171 Aldehyde dehydrogenase family NQU90_17365 PF00696 Amino acid kinase family NQU90_17365 PF01472 PUA domain NQU90_17370 PF07417 Sigma factor-binding transcriptional regulator Crl NQU90_17375 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NQU90_17380 PF00156 Phosphoribosyl transferase domain NQU90_17385 PF07687 Peptidase dimerisation domain NQU90_17385 PF01546 Peptidase family M20/M25/M40 NQU90_17390 PF05099 Tellurite resistance protein TerB NQU90_17390 PF00226 DnaJ domain NQU90_17395 PF00483 Nucleotidyl transferase NQU90_17400 PF01636 Phosphotransferase enzyme family NQU90_17405 PF04453 LPS transport system D NQU90_17405 PF03968 OstA-like protein NQU90_17410 PF00639 PPIC-type PPIASE domain NQU90_17410 PF09312 SurA N-terminal domain NQU90_17415 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NQU90_17420 PF00398 Ribosomal RNA adenine dimethylase NQU90_17425 PF04379 ApaG domain NQU90_17430 PF00149 Calcineurin-like phosphoesterase NQU90_17445 PF00296 Luciferase-like monooxygenase NQU90_17455 PF07670 Nucleoside recognition NQU90_17460 PF01018 GTP1/OBG NQU90_17460 PF01926 50S ribosome-binding GTPase NQU90_17465 PF01016 Ribosomal L27 protein NQU90_17470 PF00829 Ribosomal prokaryotic L21 protein NQU90_17475 PF00348 Polyprenyl synthetase NQU90_17480 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NQU90_17485 PF01145 SPFH domain / Band 7 family NQU90_17490 PF12221 Bacterial membrane protein N terminal NQU90_17490 PF01145 SPFH domain / Band 7 family NQU90_17495 PF16360 GTP-binding GTPase Middle Region NQU90_17495 PF13167 GTP-binding GTPase N-terminal NQU90_17495 PF01926 50S ribosome-binding GTPase NQU90_17500 PF17209 Hfq protein NQU90_17510 PF08676 MutL C terminal dimerisation domain NQU90_17510 PF01119 DNA mismatch repair protein, C-terminal domain NQU90_17515 PF08676 MutL C terminal dimerisation domain NQU90_17515 PF01119 DNA mismatch repair protein, C-terminal domain NQU90_17520 PF01520 N-acetylmuramoyl-L-alanine amidase NQU90_17525 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NQU90_17530 PF01256 Carbohydrate kinase NQU90_17530 PF03853 YjeF-related protein N-terminus NQU90_17535 PF08331 Domain of unknown function (DUF1730) NQU90_17540 PF00480 ROK family NQU90_17550 PF00005 ABC transporter NQU90_17550 PF09383 NIL domain NQU90_17555 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_17560 PF03180 NLPA lipoprotein NQU90_17565 PF02357 Transcription termination factor nusG NQU90_17570 PF00672 HAMP domain NQU90_17570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_17575 PF00563 EAL domain NQU90_17575 PF00990 Diguanylate cyclase, GGDEF domain NQU90_17575 PF03707 Bacterial signalling protein N terminal repeat NQU90_17580 PF00512 His Kinase A (phospho-acceptor) domain NQU90_17580 PF09456 RcsC Alpha-Beta-Loop (ABL) NQU90_17580 PF00072 Response regulator receiver domain NQU90_17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_17590 PF01966 HD domain NQU90_17590 PF13286 Phosphohydrolase-associated domain NQU90_17595 PF18415 Histidine kinase receptor ArcB trans-membrane domain NQU90_17595 PF00072 Response regulator receiver domain NQU90_17595 PF00989 PAS fold NQU90_17595 PF01627 Hpt domain NQU90_17595 PF00512 His Kinase A (phospho-acceptor) domain NQU90_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_17615 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NQU90_17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_17620 PF03466 LysR substrate binding domain NQU90_17630 PF01259 SAICAR synthetase NQU90_17635 PF06804 NlpB/DapX lipoprotein NQU90_17640 PF00701 Dihydrodipicolinate synthetase family NQU90_17645 PF01842 ACT domain NQU90_17650 PF00578 AhpC/TSA family NQU90_17655 PF03887 YfbU domain NQU90_17660 PF04217 Protein of unknown function, DUF412 NQU90_17665 PF00871 Acetokinase family NQU90_17670 PF07085 DRTGG domain NQU90_17670 PF01515 Phosphate acetyl/butaryl transferase NQU90_17680 PF00483 Nucleotidyl transferase NQU90_17685 PF00854 POT family NQU90_17690 PF00072 Response regulator receiver domain NQU90_17720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQU90_17725 PF02321 Outer membrane efflux protein NQU90_17730 PF01207 Dihydrouridine synthase (Dus) NQU90_17735 PF02954 Bacterial regulatory protein, Fis family NQU90_17745 PF01555 DNA methylase NQU90_17760 PF00271 Helicase conserved C-terminal domain NQU90_17760 PF00176 SNF2 family N-terminal domain NQU90_17765 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A NQU90_17810 PF04002 RadC-like JAB domain NQU90_17905 PF07687 Peptidase dimerisation domain NQU90_17905 PF01546 Peptidase family M20/M25/M40 NQU90_17910 PF03466 LysR substrate binding domain NQU90_17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_17915 PF01810 LysE type translocator NQU90_17920 PF10369 Small subunit of acetolactate synthase NQU90_17925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQU90_17925 PF00205 Thiamine pyrophosphate enzyme, central domain NQU90_17925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NQU90_17940 PF01569 PAP2 superfamily NQU90_17950 PF00682 HMGL-like NQU90_17950 PF08502 LeuA allosteric (dimerisation) domain NQU90_17955 PF00180 Isocitrate/isopropylmalate dehydrogenase NQU90_17960 PF00330 Aconitase family (aconitate hydratase) NQU90_17965 PF00694 Aconitase C-terminal domain NQU90_17985 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_17990 PF00005 ABC transporter NQU90_17995 PF02562 PhoH-like protein NQU90_17995 PF13638 PIN domain NQU90_18000 PF01695 IstB-like ATP binding protein NQU90_18005 PF00665 Integrase core domain NQU90_18005 PF02796 Helix-turn-helix domain of resolvase NQU90_18020 PF08343 Ribonucleotide reductase N-terminal NQU90_18020 PF00317 Ribonucleotide reductase, all-alpha domain NQU90_18020 PF02867 Ribonucleotide reductase, barrel domain NQU90_18050 PF00563 EAL domain NQU90_18050 PF03707 Bacterial signalling protein N terminal repeat NQU90_18050 PF00990 Diguanylate cyclase, GGDEF domain NQU90_18060 PF00118 TCP-1/cpn60 chaperonin family NQU90_18065 PF00166 Chaperonin 10 Kd subunit NQU90_18070 PF01554 MatE NQU90_18075 PF04186 FxsA cytoplasmic membrane protein NQU90_18080 PF10415 Fumarase C C-terminus NQU90_18080 PF00206 Lyase NQU90_18085 PF03605 Anaerobic c4-dicarboxylate membrane transporter NQU90_18090 PF00814 Glycoprotease family NQU90_18095 PF01165 Ribosomal protein S21 NQU90_18100 PF09424 Yqey-like protein NQU90_18105 PF10410 DnaB-helicase binding domain of primase NQU90_18105 PF08278 DNA primase DnaG DnaB-binding NQU90_18105 PF08275 DNA primase catalytic core, N-terminal domain NQU90_18105 PF01807 CHC2 zinc finger NQU90_18110 PF04545 Sigma-70, region 4 NQU90_18110 PF04539 Sigma-70 region 3 NQU90_18110 PF04542 Sigma-70 region 2 NQU90_18110 PF00140 Sigma-70 factor, region 1.2 NQU90_18110 PF04546 Sigma-70, non-essential region NQU90_18110 PF03979 Sigma-70 factor, region 1.1 NQU90_18130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NQU90_18130 PF02843 Phosphoribosylglycinamide synthetase, C domain NQU90_18130 PF02844 Phosphoribosylglycinamide synthetase, N domain NQU90_18135 PF01808 AICARFT/IMPCHase bienzyme NQU90_18135 PF02142 MGS-like domain NQU90_18145 PF13411 MerR HTH family regulatory protein NQU90_18150 PF03889 Alternative ribosome-rescue factor A NQU90_18155 PF04055 Radical SAM superfamily NQU90_18155 PF06969 HemN C-terminal domain NQU90_18160 PF01725 Ham1 family NQU90_18165 PF07690 Major Facilitator Superfamily NQU90_18170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQU90_18170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQU90_18180 PF13302 Acetyltransferase (GNAT) domain NQU90_18185 PF13302 Acetyltransferase (GNAT) domain NQU90_18190 PF01447 Thermolysin metallopeptidase, catalytic domain NQU90_18190 PF07504 Fungalysin/Thermolysin Propeptide Motif NQU90_18190 PF04151 Bacterial pre-peptidase C-terminal domain NQU90_18190 PF03413 Peptidase propeptide and YPEB domain NQU90_18190 PF02868 Thermolysin metallopeptidase, alpha-helical domain NQU90_18195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_18195 PF03466 LysR substrate binding domain NQU90_18200 PF07690 Major Facilitator Superfamily NQU90_18205 PF00583 Acetyltransferase (GNAT) family NQU90_18215 PF16658 Class II release factor RF3, C-terminal domain NQU90_18215 PF00009 Elongation factor Tu GTP binding domain NQU90_18215 PF03144 Elongation factor Tu domain 2 NQU90_18225 PF00990 Diguanylate cyclase, GGDEF domain NQU90_18230 PF05762 VWA domain containing CoxE-like protein NQU90_18235 PF07728 AAA domain (dynein-related subfamily) NQU90_18235 PF17868 AAA lid domain NQU90_18235 PF12592 Protein of unknown function (DUF3763) NQU90_18255 PF00501 AMP-binding enzyme NQU90_18260 PF04262 Glutamate-cysteine ligase NQU90_18265 PF00675 Insulinase (Peptidase family M16) NQU90_18265 PF05193 Peptidase M16 inactive domain NQU90_18270 PF09335 SNARE associated Golgi protein NQU90_18275 PF08240 Alcohol dehydrogenase GroES-like domain NQU90_18275 PF00107 Zinc-binding dehydrogenase NQU90_18300 PF00175 Oxidoreductase NAD-binding domain NQU90_18300 PF00970 Oxidoreductase FAD-binding domain NQU90_18305 PF03948 Ribosomal protein L9, C-terminal domain NQU90_18305 PF01281 Ribosomal protein L9, N-terminal domain NQU90_18310 PF01084 Ribosomal protein S18 NQU90_18315 PF01250 Ribosomal protein S6 NQU90_18320 PF01566 Natural resistance-associated macrophage protein NQU90_18325 PF02272 DHHA1 domain NQU90_18325 PF01411 tRNA synthetases class II (A) NQU90_18325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQU90_18335 PF00216 Bacterial DNA-binding protein NQU90_18340 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NQU90_18345 PF07238 PilZ domain NQU90_18350 PF18073 Rubredoxin metal binding domain NQU90_18365 PF18429 Domain of unknown function (DUF5609) NQU90_18375 PF01048 Phosphorylase superfamily NQU90_18380 PF01676 Metalloenzyme superfamily NQU90_18385 PF00591 Glycosyl transferase family, a/b domain NQU90_18385 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NQU90_18385 PF02885 Glycosyl transferase family, helical bundle domain NQU90_18390 PF01791 DeoC/LacD family aldolase NQU90_18400 PF07670 Nucleoside recognition NQU90_18400 PF07662 Na+ dependent nucleoside transporter C-terminus NQU90_18400 PF01773 Na+ dependent nucleoside transporter N-terminus NQU90_18405 PF01026 TatD related DNase NQU90_18410 PF07963 Prokaryotic N-terminal methylation motif NQU90_18415 PF02664 S-Ribosylhomocysteinase (LuxS) NQU90_18425 PF00543 Nitrogen regulatory protein P-II NQU90_18430 PF02540 NAD synthase NQU90_18430 PF00795 Carbon-nitrogen hydrolase NQU90_18450 PF05567 Neisseria PilC beta-propeller domain NQU90_18470 PF07963 Prokaryotic N-terminal methylation motif NQU90_18470 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NQU90_18475 PF02401 LytB protein NQU90_18480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NQU90_18485 PF01252 Signal peptidase (SPase) II NQU90_18490 PF06827 Zinc finger found in FPG and IleRS NQU90_18490 PF08264 Anticodon-binding domain of tRNA NQU90_18490 PF00133 tRNA synthetases class I (I, L, M and V) NQU90_18495 PF06574 FAD synthetase NQU90_18495 PF01687 Riboflavin kinase NQU90_18500 PF03023 Lipid II flippase MurJ NQU90_18505 PF01649 Ribosomal protein S20 NQU90_18510 PF01022 Bacterial regulatory protein, arsR family NQU90_18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_18515 PF03466 LysR substrate binding domain NQU90_18525 PF06965 Na+/H+ antiporter 1 NQU90_18530 PF00303 Thymidylate synthase NQU90_18535 PF01790 Prolipoprotein diacylglyceryl transferase NQU90_18540 PF02896 PEP-utilising enzyme, TIM barrel domain NQU90_18540 PF00391 PEP-utilising enzyme, mobile domain NQU90_18540 PF01590 GAF domain NQU90_18540 PF05524 PEP-utilising enzyme, N-terminal NQU90_18545 PF00293 NUDIX domain NQU90_18550 PF02976 DNA mismatch repair enzyme MutH NQU90_18560 PF01245 Ribosomal protein L19 NQU90_18565 PF01746 tRNA (Guanine-1)-methyltransferase NQU90_18570 PF05239 PRC-barrel domain NQU90_18570 PF01782 RimM N-terminal domain NQU90_18575 PF00886 Ribosomal protein S16 NQU90_18580 PF00448 SRP54-type protein, GTPase domain NQU90_18580 PF02881 SRP54-type protein, helical bundle domain NQU90_18580 PF02978 Signal peptide binding domain NQU90_18585 PF01578 Cytochrome C assembly protein NQU90_18590 PF03471 Transporter associated domain NQU90_18590 PF01595 Cyclin M transmembrane N-terminal domain NQU90_18590 PF00571 CBS domain NQU90_18595 PF02082 Transcriptional regulator NQU90_18600 PF00970 Oxidoreductase FAD-binding domain NQU90_18600 PF00042 Globin NQU90_18600 PF00175 Oxidoreductase NAD-binding domain NQU90_18605 PF08238 Sel1 repeat NQU90_18610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NQU90_18610 PF00056 lactate/malate dehydrogenase, NAD binding domain NQU90_18615 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_18620 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_18625 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_18630 PF00005 ABC transporter NQU90_18635 PF01316 Arginine repressor, DNA binding domain NQU90_18635 PF02863 Arginine repressor, C-terminal domain NQU90_18640 PF04261 Dyp-type peroxidase family NQU90_18645 PF00005 ABC transporter NQU90_18645 PF08402 TOBE domain NQU90_18655 PF13416 Bacterial extracellular solute-binding protein NQU90_18660 PF00543 Nitrogen regulatory protein P-II NQU90_18665 PF00472 RF-1 domain NQU90_18670 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NQU90_18670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NQU90_18680 PF03883 Peroxide stress protein YaaA NQU90_18685 PF00437 Type II/IV secretion system protein NQU90_18690 PF00437 Type II/IV secretion system protein NQU90_18695 PF01168 Alanine racemase, N-terminal domain NQU90_18700 PF03807 NADP oxidoreductase coenzyme F420-dependent NQU90_18700 PF14748 Pyrroline-5-carboxylate reductase dimerisation NQU90_18705 PF02325 YGGT family NQU90_18710 PF02594 Uncharacterised ACR, YggU family COG1872 NQU90_18720 PF07670 Nucleoside recognition NQU90_18720 PF07662 Na+ dependent nucleoside transporter C-terminus NQU90_18720 PF01773 Na+ dependent nucleoside transporter N-terminus NQU90_18725 PF03466 LysR substrate binding domain NQU90_18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_18730 PF00255 Glutathione peroxidase NQU90_18740 PF02595 Glycerate kinase family NQU90_18745 PF02447 GntP family permease NQU90_18750 PF17853 GGDEF-like domain NQU90_18750 PF13556 PucR C-terminal helix-turn-helix domain NQU90_18750 PF05651 Putative sugar diacid recognition NQU90_18755 PF06062 Uncharacterised protein family (UPF0231) NQU90_18775 PF03372 Endonuclease/Exonuclease/phosphatase family NQU90_18785 PF00271 Helicase conserved C-terminal domain NQU90_18785 PF00270 DEAD/DEAH box helicase NQU90_18795 PF08534 Redoxin NQU90_18800 PF00403 Heavy-metal-associated domain NQU90_18815 PF02583 Metal-sensitive transcriptional repressor NQU90_18820 PF00155 Aminotransferase class I and II NQU90_18825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_18825 PF03466 LysR substrate binding domain NQU90_18835 PF04055 Radical SAM superfamily NQU90_18840 PF11230 Protein of unknown function (DUF3029) NQU90_18870 PF00535 Glycosyl transferase family 2 NQU90_18875 PF14883 Hypothetical glycosyl hydrolase family 13 NQU90_18875 PF01522 Polysaccharide deacetylase NQU90_18890 PF12729 Four helix bundle sensory module for signal transduction NQU90_18890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_18890 PF00672 HAMP domain NQU90_18895 PF18416 N-acetylglucosamine binding protein domain 2 NQU90_18895 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NQU90_18900 PF03466 LysR substrate binding domain NQU90_18900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_18905 PF00005 ABC transporter NQU90_18905 PF12857 TOBE-like domain NQU90_18910 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_18915 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_18930 PF13194 Domain of unknown function (DUF4010) NQU90_18935 PF12464 Maltose acetyltransferase NQU90_18935 PF14602 Hexapeptide repeat of succinyl-transferase NQU90_18950 PF13419 Haloacid dehalogenase-like hydrolase NQU90_18955 PF00293 NUDIX domain NQU90_18960 PF00459 Inositol monophosphatase family NQU90_18965 PF03222 Tryptophan/tyrosine permease family NQU90_18970 PF01588 Putative tRNA binding domain NQU90_18975 PF02311 AraC-like ligand binding domain NQU90_18975 PF12833 Helix-turn-helix domain NQU90_18980 PF01340 Met Apo-repressor, MetJ NQU90_18985 PF01053 Cys/Met metabolism PLP-dependent enzyme NQU90_18990 PF00742 Homoserine dehydrogenase NQU90_18990 PF03447 Homoserine dehydrogenase, NAD binding domain NQU90_18990 PF00696 Amino acid kinase family NQU90_18995 PF01384 Phosphate transporter family NQU90_19000 PF01865 Protein of unknown function DUF47 NQU90_19010 PF00701 Dihydrodipicolinate synthetase family NQU90_19015 PF08468 Methyltransferase small domain N-terminal NQU90_19015 PF05175 Methyltransferase small domain NQU90_19020 PF00483 Nucleotidyl transferase NQU90_19025 PF00534 Glycosyl transferases group 1 NQU90_19025 PF08323 Starch synthase catalytic domain NQU90_19065 PF03553 Na+/H+ antiporter family NQU90_19070 PF01521 Iron-sulphur cluster biosynthesis NQU90_19080 PF00654 Voltage gated chloride channel NQU90_19085 PF00202 Aminotransferase class-III NQU90_19100 PF06965 Na+/H+ antiporter 1 NQU90_19100 PF13462 Thioredoxin NQU90_19130 PF00176 SNF2 family N-terminal domain NQU90_19130 PF18337 RapA N-terminal Tudor like domain NQU90_19130 PF18339 RapA N-terminal Tudor like domain 1 NQU90_19130 PF12137 RNA polymerase recycling family C-terminal NQU90_19130 PF00271 Helicase conserved C-terminal domain NQU90_19135 PF00849 RNA pseudouridylate synthase NQU90_19145 PF14602 Hexapeptide repeat of succinyl-transferase NQU90_19145 PF12464 Maltose acetyltransferase NQU90_19150 PF11941 Domain of unknown function (DUF3459) NQU90_19150 PF00128 Alpha amylase, catalytic domain NQU90_19155 PF00367 phosphotransferase system, EIIB NQU90_19155 PF02378 Phosphotransferase system, EIIC NQU90_19160 PF00356 Bacterial regulatory proteins, lacI family NQU90_19175 PF00710 Asparaginase, N-terminal NQU90_19175 PF17763 Glutaminase/Asparaginase C-terminal domain NQU90_19185 PF01595 Cyclin M transmembrane N-terminal domain NQU90_19185 PF00571 CBS domain NQU90_19185 PF03471 Transporter associated domain NQU90_19190 PF09335 SNARE associated Golgi protein NQU90_19195 PF00768 D-alanyl-D-alanine carboxypeptidase NQU90_19230 PF02599 Global regulator protein family NQU90_19235 PF00696 Amino acid kinase family NQU90_19235 PF01842 ACT domain NQU90_19235 PF13840 ACT domain NQU90_19240 PF01411 tRNA synthetases class II (A) NQU90_19240 PF02272 DHHA1 domain NQU90_19240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQU90_19245 PF02631 RecX family NQU90_19250 PF00154 recA bacterial DNA recombination protein NQU90_19255 PF02464 Competence-damaged protein NQU90_19260 PF01624 MutS domain I NQU90_19260 PF05188 MutS domain II NQU90_19260 PF05192 MutS domain III NQU90_19260 PF05190 MutS family domain IV NQU90_19260 PF00488 MutS domain V NQU90_19265 PF01734 Patatin-like phospholipase NQU90_19275 PF04172 LrgB-like family NQU90_19280 PF03788 LrgA family NQU90_19285 PF03466 LysR substrate binding domain NQU90_19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_19295 PF04073 Aminoacyl-tRNA editing domain NQU90_19320 PF06968 Biotin and Thiamin Synthesis associated domain NQU90_19320 PF04055 Radical SAM superfamily NQU90_19325 PF05690 Thiazole biosynthesis protein ThiG NQU90_19335 PF00899 ThiF family NQU90_19340 PF02581 Thiamine monophosphate synthase NQU90_19345 PF13667 ThiC-associated domain NQU90_19345 PF01964 Radical SAM ThiC family NQU90_19355 PF01609 Transposase DDE domain NQU90_19355 PF13808 DDE_Tnp_1-associated NQU90_19375 PF00072 Response regulator receiver domain NQU90_19375 PF00486 Transcriptional regulatory protein, C terminal NQU90_19385 PF18030 RimK PreATP-grasp domain NQU90_19385 PF08443 RimK-like ATP-grasp domain NQU90_19390 PF02607 B12 binding domain NQU90_19390 PF02965 Vitamin B12 dependent methionine synthase, activation domain NQU90_19390 PF00809 Pterin binding enzyme NQU90_19390 PF02574 Homocysteine S-methyltransferase NQU90_19390 PF02310 B12 binding domain NQU90_19395 PF00999 Sodium/hydrogen exchanger family NQU90_19420 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NQU90_19430 PF07690 Major Facilitator Superfamily NQU90_19435 PF01914 MarC family integral membrane protein NQU90_19445 PF01523 Putative modulator of DNA gyrase NQU90_19450 PF00795 Carbon-nitrogen hydrolase NQU90_19465 PF13116 Protein of unknown function NQU90_19465 PF13502 AsmA-like C-terminal region NQU90_19470 PF10150 Ribonuclease E/G family NQU90_19470 PF00575 S1 RNA binding domain NQU90_19475 PF02545 Maf-like protein NQU90_19480 PF04093 rod shape-determining protein MreD NQU90_19485 PF04085 rod shape-determining protein MreC NQU90_19515 PF14245 Type IV pilin PilA NQU90_19515 PF07963 Prokaryotic N-terminal methylation motif NQU90_19520 PF00114 Pilin (bacterial filament) NQU90_19520 PF07963 Prokaryotic N-terminal methylation motif NQU90_19535 PF00482 Type II secretion system (T2SS), protein F NQU90_19540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NQU90_19540 PF00437 Type II/IV secretion system protein NQU90_19555 PF03958 Bacterial type II/III secretion system short domain NQU90_19555 PF00263 Bacterial type II and III secretion system protein NQU90_19585 PF00990 Diguanylate cyclase, GGDEF domain NQU90_19585 PF17157 Gammaproteobacterial periplasmic sensor domain NQU90_19585 PF00563 EAL domain NQU90_19590 PF00563 EAL domain NQU90_19590 PF12792 CSS motif domain associated with EAL NQU90_19595 PF01699 Sodium/calcium exchanger protein NQU90_19600 PF00221 Aromatic amino acid lyase NQU90_19605 PF17392 Urocanase C-terminal domain NQU90_19605 PF01175 Urocanase Rossmann-like domain NQU90_19605 PF17391 Urocanase N-terminal domain NQU90_19610 PF00491 Arginase family NQU90_19615 PF01979 Amidohydrolase family NQU90_19620 PF00392 Bacterial regulatory proteins, gntR family NQU90_19620 PF07702 UTRA domain NQU90_19625 PF00484 Carbonic anhydrase NQU90_19630 PF04545 Sigma-70, region 4 NQU90_19630 PF04542 Sigma-70 region 2 NQU90_19630 PF00140 Sigma-70 factor, region 1.2 NQU90_19635 PF18075 FtsX extracellular domain NQU90_19640 PF00005 ABC transporter NQU90_19645 PF00448 SRP54-type protein, GTPase domain NQU90_19645 PF02881 SRP54-type protein, helical bundle domain NQU90_19670 PF00999 Sodium/hydrogen exchanger family NQU90_19670 PF02254 TrkA-N domain NQU90_19675 PF02525 Flavodoxin-like fold NQU90_19680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_19680 PF03466 LysR substrate binding domain NQU90_19685 PF00106 short chain dehydrogenase NQU90_19700 PF00326 Prolyl oligopeptidase family NQU90_19700 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NQU90_19715 PF13091 PLD-like domain NQU90_19725 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_19725 PF01464 Transglycosylase SLT domain NQU90_19735 PF02416 mttA/Hcf106 family NQU90_19740 PF03466 LysR substrate binding domain NQU90_19740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_19745 PF01914 MarC family integral membrane protein NQU90_19750 PF10678 Protein of unknown function (DUF2492) NQU90_19755 PF00375 Sodium:dicarboxylate symporter family NQU90_19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_19765 PF03466 LysR substrate binding domain NQU90_19770 PF13533 Biotin-lipoyl like NQU90_19775 PF07690 Major Facilitator Superfamily NQU90_19780 PF07947 YhhN family NQU90_19795 PF00440 Bacterial regulatory proteins, tetR family NQU90_19840 PF00009 Elongation factor Tu GTP binding domain NQU90_19840 PF03143 Elongation factor Tu C-terminal domain NQU90_19840 PF03144 Elongation factor Tu domain 2 NQU90_19845 PF00679 Elongation factor G C-terminus NQU90_19845 PF14492 Elongation Factor G, domain II NQU90_19845 PF03764 Elongation factor G, domain IV NQU90_19845 PF00009 Elongation factor Tu GTP binding domain NQU90_19845 PF03144 Elongation factor Tu domain 2 NQU90_19850 PF00177 Ribosomal protein S7p/S5e NQU90_19855 PF00164 Ribosomal protein S12/S23 NQU90_19860 PF04077 DsrH like protein NQU90_19865 PF02635 DsrE/DsrF-like family NQU90_19870 PF02635 DsrE/DsrF-like family NQU90_19875 PF01042 Endoribonuclease L-PSP NQU90_19880 PF13309 HTH domain NQU90_19880 PF08348 YheO-like PAS domain NQU90_19885 PF00623 RNA polymerase Rpb1, domain 2 NQU90_19885 PF04983 RNA polymerase Rpb1, domain 3 NQU90_19885 PF05000 RNA polymerase Rpb1, domain 4 NQU90_19885 PF04998 RNA polymerase Rpb1, domain 5 NQU90_19885 PF04997 RNA polymerase Rpb1, domain 1 NQU90_19890 PF04563 RNA polymerase beta subunit NQU90_19890 PF04565 RNA polymerase Rpb2, domain 3 NQU90_19890 PF10385 RNA polymerase beta subunit external 1 domain NQU90_19890 PF00562 RNA polymerase Rpb2, domain 6 NQU90_19890 PF04560 RNA polymerase Rpb2, domain 7 NQU90_19890 PF04561 RNA polymerase Rpb2, domain 2 NQU90_19895 PF00542 Ribosomal protein L7/L12 C-terminal domain NQU90_19895 PF16320 Ribosomal protein L7/L12 dimerisation domain NQU90_19900 PF00466 Ribosomal protein L10 NQU90_19905 PF00687 Ribosomal protein L1p/L10e family NQU90_19910 PF00298 Ribosomal protein L11, RNA binding domain NQU90_19910 PF03946 Ribosomal protein L11, N-terminal domain NQU90_19915 PF00467 KOW motif NQU90_19915 PF02357 Transcription termination factor nusG NQU90_19920 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NQU90_19930 PF03144 Elongation factor Tu domain 2 NQU90_19930 PF03143 Elongation factor Tu C-terminal domain NQU90_19930 PF00009 Elongation factor Tu GTP binding domain NQU90_19945 PF00485 Phosphoribulokinase / Uridine kinase family NQU90_19950 PF02237 Biotin protein ligase C terminal domain NQU90_19950 PF03099 Biotin/lipoate A/B protein ligase family NQU90_19950 PF08279 HTH domain NQU90_19955 PF01565 FAD binding domain NQU90_19955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NQU90_19960 PF02080 TrkA-C domain NQU90_19960 PF02254 TrkA-N domain NQU90_19965 PF02386 Cation transport protein NQU90_19985 PF01131 DNA topoisomerase NQU90_19985 PF01751 Toprim domain NQU90_19995 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQU90_19995 PF00512 His Kinase A (phospho-acceptor) domain NQU90_19995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_20000 PF03264 NapC/NirT cytochrome c family, N-terminal region NQU90_20005 PF00384 Molybdopterin oxidoreductase NQU90_20005 PF18364 Molybdopterin oxidoreductase N-terminal domain NQU90_20005 PF01568 Molydopterin dinucleotide binding domain NQU90_20015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_20020 PF00486 Transcriptional regulatory protein, C terminal NQU90_20020 PF00072 Response regulator receiver domain NQU90_20035 PF01794 Ferric reductase like transmembrane component NQU90_20040 PF00174 Oxidoreductase molybdopterin binding domain NQU90_20045 PF06496 Protein of unknown function (DUF1097) NQU90_20050 PF00158 Sigma-54 interaction domain NQU90_20050 PF00072 Response regulator receiver domain NQU90_20060 PF00512 His Kinase A (phospho-acceptor) domain NQU90_20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_20080 PF00478 IMP dehydrogenase / GMP reductase domain NQU90_20080 PF00571 CBS domain NQU90_20085 PF10063 Uncharacterized integral membrane protein (DUF2301) NQU90_20095 PF01037 Lrp/AsnC ligand binding domain NQU90_20100 PF03590 Aspartate-ammonia ligase NQU90_20105 PF10431 C-terminal, D2-small domain, of ClpB protein NQU90_20105 PF02861 Clp amino terminal domain, pathogenicity island component NQU90_20105 PF17871 AAA lid domain NQU90_20105 PF07724 AAA domain (Cdc48 subfamily) NQU90_20105 PF00004 ATPase family associated with various cellular activities (AAA) NQU90_20110 PF02578 Multi-copper polyphenol oxidoreductase laccase NQU90_20115 PF01479 S4 domain NQU90_20115 PF00849 RNA pseudouridylate synthase NQU90_20120 PF13525 Outer membrane lipoprotein NQU90_20125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQU90_20125 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQU90_20130 PF00375 Sodium:dicarboxylate symporter family NQU90_20135 PF03313 Serine dehydratase alpha chain NQU90_20140 PF08348 YheO-like PAS domain NQU90_20140 PF13309 HTH domain NQU90_20150 PF02233 NAD(P) transhydrogenase beta subunit NQU90_20155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NQU90_20155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NQU90_20155 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NQU90_20160 PF00465 Iron-containing alcohol dehydrogenase NQU90_20165 PF12833 Helix-turn-helix domain NQU90_20165 PF06719 AraC-type transcriptional regulator N-terminus NQU90_20170 PF08212 Lipocalin-like domain NQU90_20175 PF02743 Cache domain NQU90_20175 PF00672 HAMP domain NQU90_20175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_20185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_20185 PF03466 LysR substrate binding domain NQU90_20205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NQU90_20205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NQU90_20210 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NQU90_20210 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NQU90_20215 PF01316 Arginine repressor, DNA binding domain NQU90_20215 PF02863 Arginine repressor, C-terminal domain NQU90_20220 PF03606 C4-dicarboxylate anaerobic carrier NQU90_20225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NQU90_20225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NQU90_20230 PF00696 Amino acid kinase family NQU90_20255 PF06969 HemN C-terminal domain NQU90_20255 PF04055 Radical SAM superfamily NQU90_20260 PF10675 Protein of unknown function (DUF2489) NQU90_20265 PF04220 Der GTPase activator (YihI) NQU90_20270 PF00034 Cytochrome c NQU90_20275 PF01926 50S ribosome-binding GTPase NQU90_20285 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NQU90_20285 PF01488 Shikimate / quinate 5-dehydrogenase NQU90_20285 PF08501 Shikimate dehydrogenase substrate binding domain NQU90_20290 PF01218 Coproporphyrinogen III oxidase NQU90_20295 PF01300 Telomere recombination NQU90_20300 PF00731 AIR carboxylase NQU90_20305 PF01396 Topoisomerase DNA binding C4 zinc finger NQU90_20310 PF04361 Protein of unknown function (DUF494) NQU90_20315 PF02481 DNA recombination-mediator protein A NQU90_20315 PF17782 DprA winged helix domain NQU90_20320 PF01476 LysM domain NQU90_20325 PF01327 Polypeptide deformylase NQU90_20330 PF02911 Formyl transferase, C-terminal domain NQU90_20330 PF00551 Formyl transferase NQU90_20335 PF01029 NusB family NQU90_20335 PF01189 16S rRNA methyltransferase RsmB/F NQU90_20340 PF02080 TrkA-C domain NQU90_20340 PF02254 TrkA-N domain NQU90_20345 PF02386 Cation transport protein NQU90_20350 PF00679 Elongation factor G C-terminus NQU90_20350 PF00009 Elongation factor Tu GTP binding domain NQU90_20350 PF03144 Elongation factor Tu domain 2 NQU90_20355 PF00120 Glutamine synthetase, catalytic domain NQU90_20355 PF03951 Glutamine synthetase, beta-Grasp domain NQU90_20365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_20365 PF00512 His Kinase A (phospho-acceptor) domain NQU90_20365 PF00989 PAS fold NQU90_20370 PF00072 Response regulator receiver domain NQU90_20370 PF00158 Sigma-54 interaction domain NQU90_20370 PF02954 Bacterial regulatory protein, Fis family NQU90_20375 PF00962 Adenosine/AMP deaminase NQU90_20380 PF02646 RmuC family NQU90_20395 PF02082 Transcriptional regulator NQU90_20400 PF00294 pfkB family carbohydrate kinase NQU90_20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_20405 PF03466 LysR substrate binding domain NQU90_20410 PF00117 Glutamine amidotransferase class-I NQU90_20410 PF00958 GMP synthase C terminal domain NQU90_20410 PF02540 NAD synthase NQU90_20415 PF00171 Aldehyde dehydrogenase family NQU90_20420 PF00202 Aminotransferase class-III NQU90_20425 PF07883 Cupin domain NQU90_20425 PF01381 Helix-turn-helix NQU90_20430 PF00171 Aldehyde dehydrogenase family NQU90_20440 PF00892 EamA-like transporter family NQU90_20445 PF17200 Single Cache domain 2 NQU90_20445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_20445 PF00672 HAMP domain NQU90_20450 PF04143 Sulphur transport NQU90_20455 PF01389 OmpA-like transmembrane domain NQU90_20455 PF00691 OmpA family NQU90_20460 PF00291 Pyridoxal-phosphate dependent enzyme NQU90_20460 PF00585 C-terminal regulatory domain of Threonine dehydratase NQU90_20465 PF00920 Dehydratase family NQU90_20470 PF01063 Amino-transferase class IV NQU90_20480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQU90_20480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NQU90_20480 PF00205 Thiamine pyrophosphate enzyme, central domain NQU90_20485 PF01078 Magnesium chelatase, subunit ChlI NQU90_20485 PF13335 Magnesium chelatase, subunit ChlI C-terminal NQU90_20490 PF01553 Acyltransferase NQU90_20495 PF01553 Acyltransferase NQU90_20500 PF04463 Protein of unknown function (DUF523) NQU90_20510 PF00857 Isochorismatase family NQU90_20515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NQU90_20515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NQU90_20520 PF01323 DSBA-like thioredoxin domain NQU90_20525 PF01636 Phosphotransferase enzyme family NQU90_20530 PF12801 4Fe-4S binding domain NQU90_20530 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NQU90_20530 PF13746 4Fe-4S dicluster domain NQU90_20535 PF06288 Protein of unknown function (DUF1040) NQU90_20540 PF00360 Phytochrome region NQU90_20540 PF00990 Diguanylate cyclase, GGDEF domain NQU90_20540 PF01590 GAF domain NQU90_20540 PF00563 EAL domain NQU90_20545 PF13411 MerR HTH family regulatory protein NQU90_20550 PF00403 Heavy-metal-associated domain NQU90_20555 PF00156 Phosphoribosyl transferase domain NQU90_20560 PF01138 3' exoribonuclease family, domain 1 NQU90_20560 PF03725 3' exoribonuclease family, domain 2 NQU90_20565 PF08340 Domain of unknown function (DUF1732) NQU90_20565 PF03755 YicC-like family, N-terminal region NQU90_20570 PF03466 LysR substrate binding domain NQU90_20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_20575 PF00107 Zinc-binding dehydrogenase NQU90_20575 PF08240 Alcohol dehydrogenase GroES-like domain NQU90_20580 PF00756 Putative esterase NQU90_20590 PF03781 Sulfatase-modifying factor enzyme 1 NQU90_20590 PF12867 DinB superfamily NQU90_20595 PF13593 SBF-like CPA transporter family (DUF4137) NQU90_20600 PF13520 Amino acid permease NQU90_20605 PF01588 Putative tRNA binding domain NQU90_20610 PF13520 Amino acid permease NQU90_20615 PF04074 YhcH/YjgK/YiaL NQU90_20620 PF02837 Glycosyl hydrolases family 2, sugar binding domain NQU90_20620 PF00703 Glycosyl hydrolases family 2 NQU90_20620 PF16353 Domain of unknown function(DUF4981) NQU90_20620 PF02929 Beta galactosidase small chain NQU90_20620 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NQU90_20625 PF00356 Bacterial regulatory proteins, lacI family NQU90_20665 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_20670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NQU90_20670 PF00476 DNA polymerase family A NQU90_20670 PF01612 3'-5' exonuclease NQU90_20670 PF01367 5'-3' exonuclease, C-terminal SAM fold NQU90_20680 PF06005 Cell division protein ZapB NQU90_20690 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_20690 PF06426 Serine acetyltransferase, N-terminal NQU90_20695 PF16916 Dimerisation domain of Zinc Transporter NQU90_20695 PF01545 Cation efflux family NQU90_20700 PF00486 Transcriptional regulatory protein, C terminal NQU90_20700 PF00072 Response regulator receiver domain NQU90_20705 PF16527 Two-component sensor protein CpxA, periplasmic domain NQU90_20705 PF00672 HAMP domain NQU90_20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_20705 PF00512 His Kinase A (phospho-acceptor) domain NQU90_20710 PF00588 SpoU rRNA Methylase family NQU90_20715 PF01554 MatE NQU90_20720 PF02630 SCO1/SenC NQU90_20730 PF01726 LexA DNA binding domain NQU90_20730 PF00717 Peptidase S24-like NQU90_20735 PF01553 Acyltransferase NQU90_20740 PF01040 UbiA prenyltransferase family NQU90_20745 PF04345 Chorismate lyase NQU90_20770 PF08240 Alcohol dehydrogenase GroES-like domain NQU90_20770 PF00107 Zinc-binding dehydrogenase NQU90_20775 PF00356 Bacterial regulatory proteins, lacI family NQU90_20775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NQU90_20780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NQU90_20790 PF03611 PTS system sugar-specific permease component NQU90_20795 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NQU90_20800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NQU90_20805 PF00535 Glycosyl transferase family 2 NQU90_20810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NQU90_20815 PF01467 Cytidylyltransferase-like NQU90_20820 PF04393 Protein of unknown function (DUF535) NQU90_20825 PF06827 Zinc finger found in FPG and IleRS NQU90_20825 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NQU90_20825 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NQU90_20835 PF00471 Ribosomal protein L33 NQU90_20840 PF00830 Ribosomal L28 family NQU90_20845 PF04002 RadC-like JAB domain NQU90_20850 PF04127 DNA / pantothenate metabolism flavoprotein NQU90_20850 PF02441 Flavoprotein NQU90_20855 PF00692 dUTPase NQU90_20860 PF00440 Bacterial regulatory proteins, tetR family NQU90_20865 PF05552 Conserved TM helix NQU90_20865 PF00924 Mechanosensitive ion channel NQU90_20870 PF00342 Phosphoglucose isomerase NQU90_20875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NQU90_20875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NQU90_20880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_20880 PF03466 LysR substrate binding domain NQU90_20895 PF00583 Acetyltransferase (GNAT) family NQU90_20895 PF13380 CoA binding domain NQU90_20895 PF13607 Succinyl-CoA ligase like flavodoxin domain NQU90_20930 PF12724 Flavodoxin domain NQU90_20935 PF02386 Cation transport protein NQU90_20940 PF01205 Uncharacterized protein family UPF0029 NQU90_20940 PF09186 Domain of unknown function (DUF1949) NQU90_20945 PF00557 Metallopeptidase family M24 NQU90_20950 PF13193 AMP-binding enzyme C-terminal domain NQU90_20950 PF00501 AMP-binding enzyme NQU90_20955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NQU90_20955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NQU90_20955 PF00378 Enoyl-CoA hydratase/isomerase NQU90_20960 PF00108 Thiolase, N-terminal domain NQU90_20960 PF02803 Thiolase, C-terminal domain NQU90_20965 PF00072 Response regulator receiver domain NQU90_20965 PF00486 Transcriptional regulatory protein, C terminal NQU90_20970 PF00512 His Kinase A (phospho-acceptor) domain NQU90_20970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_20970 PF00672 HAMP domain NQU90_20975 PF01547 Bacterial extracellular solute-binding protein NQU90_20985 PF01206 Sulfurtransferase TusA NQU90_20990 PF01042 Endoribonuclease L-PSP NQU90_20995 PF13488 Glycine zipper NQU90_20995 PF00691 OmpA family NQU90_21000 PF03352 Methyladenine glycosylase NQU90_21005 PF02091 Glycyl-tRNA synthetase alpha subunit NQU90_21010 PF05746 DALR anticodon binding domain NQU90_21010 PF02092 Glycyl-tRNA synthetase beta subunit NQU90_21020 PF00990 Diguanylate cyclase, GGDEF domain NQU90_21020 PF13426 PAS domain NQU90_21020 PF00563 EAL domain NQU90_21025 PF03496 ADP-ribosyltransferase exoenzyme NQU90_21025 PF03545 Yersinia virulence determinant (YopE) NQU90_21030 PF03545 Yersinia virulence determinant (YopE) NQU90_21030 PF03496 ADP-ribosyltransferase exoenzyme NQU90_21035 PF05932 Tir chaperone protein (CesT) family NQU90_21045 PF00672 HAMP domain NQU90_21045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQU90_21050 PF00356 Bacterial regulatory proteins, lacI family NQU90_21055 PF13458 Periplasmic binding protein NQU90_21060 PF02653 Branched-chain amino acid transport system / permease component NQU90_21065 PF11862 Domain of unknown function (DUF3382) NQU90_21065 PF02653 Branched-chain amino acid transport system / permease component NQU90_21070 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQU90_21070 PF00005 ABC transporter NQU90_21075 PF00005 ABC transporter NQU90_21080 PF00581 Rhodanese-like domain NQU90_21085 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NQU90_21085 PF01694 Rhomboid family NQU90_21090 PF04380 Membrane fusogenic activity NQU90_21095 PF00563 EAL domain NQU90_21095 PF00990 Diguanylate cyclase, GGDEF domain NQU90_21095 PF08447 PAS fold NQU90_21095 PF08448 PAS fold NQU90_21105 PF00175 Oxidoreductase NAD-binding domain NQU90_21110 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NQU90_21120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQU90_21120 PF07497 Rho termination factor, RNA-binding domain NQU90_21120 PF07498 Rho termination factor, N-terminal domain NQU90_21125 PF00085 Thioredoxin NQU90_21130 PF00271 Helicase conserved C-terminal domain NQU90_21130 PF00270 DEAD/DEAH box helicase NQU90_21135 PF02541 Ppx/GppA phosphatase family NQU90_21145 PF04445 Putative SAM-dependent methyltransferase NQU90_21155 PF03707 Bacterial signalling protein N terminal repeat NQU90_21155 PF00990 Diguanylate cyclase, GGDEF domain NQU90_21155 PF00563 EAL domain NQU90_21160 PF01432 Peptidase family M3 NQU90_21175 PF12561 ToxR activated gene A lipoprotein domain NQU90_21175 PF00041 Fibronectin type III domain NQU90_21180 PF00490 Delta-aminolevulinic acid dehydratase NQU90_21185 PF01026 TatD related DNase NQU90_21190 PF00902 Sec-independent protein translocase protein (TatC) NQU90_21195 PF02416 mttA/Hcf106 family NQU90_21200 PF02416 mttA/Hcf106 family NQU90_21205 PF03109 ABC1 family NQU90_21210 PF02036 SCP-2 sterol transfer family NQU90_21215 PF01209 ubiE/COQ5 methyltransferase family NQU90_21220 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NQU90_21225 PF07969 Amidohydrolase family NQU90_21230 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NQU90_21265 PF03544 Gram-negative bacterial TonB protein C-terminal NQU90_21270 PF02472 Biopolymer transport protein ExbD/TolR NQU90_21275 PF01618 MotA/TolQ/ExbB proton channel family NQU90_21280 PF01618 MotA/TolQ/ExbB proton channel family NQU90_21290 PF00196 Bacterial regulatory proteins, luxR family NQU90_21290 PF03472 Autoinducer binding domain NQU90_21295 PF01380 SIS domain NQU90_21300 PF08220 DeoR-like helix-turn-helix domain NQU90_21300 PF00455 DeoR C terminal sensor domain NQU90_21305 PF00486 Transcriptional regulatory protein, C terminal NQU90_21305 PF00072 Response regulator receiver domain NQU90_21310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQU90_21310 PF00512 His Kinase A (phospho-acceptor) domain NQU90_21310 PF00672 HAMP domain NQU90_21315 PF00905 Penicillin binding protein transpeptidase domain NQU90_21325 PF06123 Inner membrane protein CreD NQU90_21340 PF13439 Glycosyltransferase Family 4 NQU90_21340 PF00534 Glycosyl transferases group 1 NQU90_21370 PF13614 AAA domain NQU90_21370 PF13807 G-rich domain on putative tyrosine kinase NQU90_21370 PF02706 Chain length determinant protein NQU90_21385 PF02397 Bacterial sugar transferase NQU90_21390 PF12804 MobA-like NTP transferase domain NQU90_21390 PF00132 Bacterial transferase hexapeptide (six repeats) NQU90_21390 PF14602 Hexapeptide repeat of succinyl-transferase NQU90_21395 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NQU90_21395 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NQU90_21400 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQU90_21400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQU90_21405 PF00231 ATP synthase NQU90_21410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQU90_21410 PF00306 ATP synthase alpha/beta chain, C terminal domain NQU90_21410 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQU90_21415 PF00213 ATP synthase delta (OSCP) subunit NQU90_21420 PF00430 ATP synthase B/B' CF(0) NQU90_21425 PF00137 ATP synthase subunit C NQU90_21430 PF00119 ATP synthase A chain NQU90_21440 PF17762 HTH domain found in ParB protein NQU90_21440 PF02195 ParB-like nuclease domain NQU90_21445 PF13614 AAA domain NQU90_21450 PF02527 rRNA small subunit methyltransferase G NQU90_21455 PF01134 Glucose inhibited division protein A NQU90_21455 PF13932 GidA associated domain NQU90_21460 PF00258 Flavodoxin NQU90_21465 PF07715 TonB-dependent Receptor Plug Domain NQU90_21465 PF00593 TonB dependent receptor NQU90_21470 PF00005 ABC transporter NQU90_21475 PF00005 ABC transporter NQU90_21480 PF01497 Periplasmic binding protein NQU90_21485 PF01032 FecCD transport family NQU90_21490 PF13657 HipA N-terminal domain NQU90_21490 PF07804 HipA-like C-terminal domain NQU90_21510 PF00589 Phage integrase family NQU90_21510 PF13495 Phage integrase, N-terminal SAM-like domain NQU90_21525 PF00893 Small Multidrug Resistance protein NQU90_21530 PF00809 Pterin binding enzyme NQU90_21545 PF13610 DDE domain NQU90_21560 PF01636 Phosphotransferase enzyme family NQU90_21565 PF13610 DDE domain NQU90_21575 PF00990 Diguanylate cyclase, GGDEF domain NQU90_21575 PF00563 EAL domain NQU90_21575 PF13188 PAS domain NQU90_21575 PF03707 Bacterial signalling protein N terminal repeat NQU90_21580 PF05052 MerE protein NQU90_21585 PF13411 MerR HTH family regulatory protein NQU90_21605 PF13610 DDE domain NQU90_21615 PF00239 Resolvase, N terminal domain NQU90_21615 PF02796 Helix-turn-helix domain of resolvase NQU90_21635 PF07690 Major Facilitator Superfamily NQU90_21640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQU90_21640 PF03466 LysR substrate binding domain NQU90_21650 PF07690 Major Facilitator Superfamily NQU90_21655 PF02909 Tetracyclin repressor-like, C-terminal domain NQU90_21655 PF00440 Bacterial regulatory proteins, tetR family NQU90_21665 PF00186 Dihydrofolate reductase NQU90_21670 PF00893 Small Multidrug Resistance protein NQU90_21675 PF00809 Pterin binding enzyme NQU90_21685 PF13610 DDE domain NQU90_21695 PF04851 Type III restriction enzyme, res subunit NQU90_21695 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NQU90_21695 PF08463 EcoEI R protein C-terminal NQU90_21695 PF00271 Helicase conserved C-terminal domain NQU90_21700 PF12161 HsdM N-terminal domain NQU90_21700 PF02384 N-6 DNA Methylase NQU90_21705 PF01420 Type I restriction modification DNA specificity domain NQU90_21735 PF02899 Phage integrase, N-terminal SAM-like domain NQU90_21735 PF00589 Phage integrase family NQU90_21740 PF10396 GTP-binding protein TrmE N-terminus NQU90_21740 PF01926 50S ribosome-binding GTPase NQU90_21740 PF12631 MnmE helical domain NQU90_21745 PF02096 60Kd inner membrane protein NQU90_21745 PF14849 YidC periplasmic domain NQU90_21750 PF01809 Putative membrane protein insertion efficiency factor NQU90_21755 PF00825 Ribonuclease P NQU90_21760 PF00468 Ribosomal protein L34 NQU90_21765 PF00005 ABC transporter NQU90_21770 PF00528 Binding-protein-dependent transport system inner membrane component NQU90_21775 PF00497 Bacterial extracellular solute-binding proteins, family 3