locus-tag	class	description
NQU90_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NQU90_00010	COG0592	DNA-directed DNA polymerase activity
NQU90_00020	COG0187	DNA topoisomerase II activity
NQU90_00035	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NQU90_00040	COG0071	Belongs to the small heat shock protein (HSP20) family
NQU90_00045	COG0071	Belongs to the small heat shock protein (HSP20) family
NQU90_00050	COG3977	Valine--pyruvate aminotransferase
NQU90_00065	COG2814	Major facilitator Superfamily
NQU90_00070	COG0745	RESPONSE REGULATOR receiver
NQU90_00075	COG2205	protein histidine kinase activity
NQU90_00095	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NQU90_00100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU90_00100	COG4191	Histidine kinase
NQU90_00105	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_00110	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_00115	COG1309	transcriptional regulator
NQU90_00145	COG0561	phosphatase activity
NQU90_00150	COG2267	carboxylic ester hydrolase activity
NQU90_00160	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NQU90_00165	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NQU90_00170	COG1758	RNA polymerase activity
NQU90_00175	COG0194	GDP metabolic process
NQU90_00180	COG0859	PFAM glycosyl transferase family 9
NQU90_00185	COG3642	lipopolysaccharide core region biosynthetic process
NQU90_00225	COG0589	response to stress
NQU90_00230	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NQU90_00235	COG1528	Iron-storage protein
NQU90_00240	COG2081	HI0933 family
NQU90_00245	COG3275	phosphorelay sensor kinase activity
NQU90_00250	COG3279	Response regulator of the LytR AlgR family
NQU90_00255	COG2223	nitrite transmembrane transporter activity
NQU90_00260	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NQU90_00265	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NQU90_00280	COG0583	DNA-binding transcription factor activity
NQU90_00285	COG4206	TonB-dependent receptor
NQU90_00290	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NQU90_00320	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NQU90_00325	COG2166	iron-sulfur cluster assembly
NQU90_00330	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NQU90_00345	COG3245	cytochrome
NQU90_00350	COG1063	alcohol dehydrogenase
NQU90_00365	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NQU90_00380	COG1216	Glycosyl transferase, family 2
NQU90_00410	COG1280	lysine exporter protein (LysE YggA)
NQU90_00460	COG0210	DNA helicase
NQU90_00475	COG1744	ABC transporter substrate-binding protein PnrA-like
NQU90_00480	COG3845	ABC transporter
NQU90_00485	COG4603	Belongs to the binding-protein-dependent transport system permease family
NQU90_00490	COG1079	Belongs to the binding-protein-dependent transport system permease family
NQU90_00495	COG2239	Acts as a magnesium transporter
NQU90_00500	COG1648	precorrin-2 dehydrogenase activity
NQU90_00500	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NQU90_00505	COG2116	formate transmembrane transporter activity
NQU90_00515	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NQU90_00520	COG0842	Transport permease protein
NQU90_00525	COG0842	Transport permease protein
NQU90_00530	COG1131	(ABC) transporter
NQU90_00535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_00550	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
NQU90_00555	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
NQU90_00565	COG0018	arginyl-trna synthetase
NQU90_00575	COG1595	DNA-templated transcription, initiation
NQU90_00585	COG1968	undecaprenyl-diphosphatase activity
NQU90_00590	COG2017	converts alpha-aldose to the beta-anomer
NQU90_00595	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NQU90_00600	COG1085	galactose-1-phosphate uridylyltransferase
NQU90_00605	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NQU90_00610	COG1609	Transcriptional regulator
NQU90_00615	COG3250	beta-galactosidase activity
NQU90_00625	COG1129	ABC transporter
NQU90_00630	COG4211	Belongs to the binding-protein-dependent transport system permease family
NQU90_00640	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NQU90_00675	COG4310	Domain of unknown function (DUF2172)
NQU90_00685	COG0366	Alpha amylase catalytic
NQU90_00700	COG0443	Heat shock 70 kDa protein
NQU90_00705	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NQU90_00710	COG3045	CreA protein
NQU90_00730	COG0174	glutamine synthetase
NQU90_00750	COG3842	ATPase activity
NQU90_00755	COG1176	ABC-type spermidine putrescine transport system, permease component I
NQU90_00760	COG1177	transmembrane transport
NQU90_00765	COG2258	MOSC domain
NQU90_00780	COG2050	protein possibly involved in aromatic compounds catabolism
NQU90_00785	COG0514	ATP-dependent DNA helicase (RecQ)
NQU90_00795	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
NQU90_00805	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
NQU90_00810	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NQU90_00825	COG0254	rRNA binding
NQU90_00830	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NQU90_00840	COG0702	epimerase
NQU90_00845	COG0814	amino acid
NQU90_00850	COG0281	malic enzyme
NQU90_00855	COG1295	ribonuclease BN
NQU90_00860	COG1490	D-aminoacyl-tRNA deacylase activity
NQU90_00865	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NQU90_00870	COG0456	acetyltransferase
NQU90_00880	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NQU90_00885	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NQU90_00890	COG2610	gluconate transmembrane transporter activity
NQU90_00895	COG3265	gluconokinase activity
NQU90_00900	COG0129	dihydroxy-acid dehydratase activity
NQU90_00905	COG0800	Aldolase
NQU90_00910	COG1609	Transcriptional regulator
NQU90_00920	COG4942	peptidase
NQU90_00925	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NQU90_00930	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NQU90_00935	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
NQU90_00940	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
NQU90_00945	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
NQU90_00945	COG0316	Belongs to the HesB IscA family
NQU90_00950	COG1040	competence protein
NQU90_00955	COG0596	Alpha beta hydrolase
NQU90_00975	COG2183	response to ionizing radiation
NQU90_00980	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NQU90_01000	COG0051	transcription antitermination factor activity, RNA binding
NQU90_01005	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NQU90_01010	COG0088	Forms part of the polypeptide exit tunnel
NQU90_01015	COG0089	rRNA binding
NQU90_01020	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NQU90_01025	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NQU90_01030	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NQU90_01035	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NQU90_01040	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NQU90_01045	COG0255	Belongs to the universal ribosomal protein uL29 family
NQU90_01050	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NQU90_01055	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NQU90_01060	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NQU90_01065	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NQU90_01070	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NQU90_01075	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NQU90_01080	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NQU90_01085	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NQU90_01090	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NQU90_01095	COG1841	ribosomal large subunit assembly
NQU90_01100	COG0200	Binds to the 23S rRNA
NQU90_01105	COG0201	protein transport
NQU90_01110	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NQU90_01115	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NQU90_01120	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NQU90_01125	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NQU90_01130	COG0202	RNA polymerase activity
NQU90_01135	COG0203	ribosomal protein L17
NQU90_01170	COG4771	TonB-dependent receptor
NQU90_01175	COG3706	GGDEF domain
NQU90_01195	COG0840	transmembrane signaling receptor activity
NQU90_01205	COG0583	DNA-binding transcription factor activity
NQU90_01215	COG1741	Belongs to the pirin family
NQU90_01220	COG2259	Doxx family
NQU90_01225	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NQU90_01230	COG1074	ATP-dependent DNA helicase activity
NQU90_01235	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NQU90_01240	COG3039	Transposase
NQU90_01265	COG1176	ABC-type spermidine putrescine transport system, permease component I
NQU90_01275	COG3842	ATPase activity
NQU90_01305	COG2873	o-acetylhomoserine
NQU90_01335	COG5380	lipid catabolic process
NQU90_01340	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
NQU90_01345	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NQU90_01370	COG0456	acetyltransferase
NQU90_01370	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NQU90_01375	COG0753	catalase activity
NQU90_01380	COG0454	-acetyltransferase
NQU90_01380	COG0456	acetyltransferase
NQU90_01405	COG2927	DNA polymerase III (CHI subunit)
NQU90_01410	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NQU90_01415	COG0795	lipopolysaccharide-transporting ATPase activity
NQU90_01420	COG0795	lipopolysaccharide-transporting ATPase activity
NQU90_01525	COG1494	fructose-1,6-bisphosphatase
NQU90_01540	COG2959	enzyme of heme biosynthesis
NQU90_01550	COG0181	hydroxymethylbilane synthase activity
NQU90_01555	COG3072	Adenylate cyclase
NQU90_01560	COG0400	carboxylic ester hydrolase activity
NQU90_01565	COG1965	Belongs to the frataxin family
NQU90_01575	COG0019	diaminopimelate decarboxylase activity
NQU90_01580	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NQU90_01590	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NQU90_01595	COG1011	Hydrolase
NQU90_01615	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NQU90_01620	COG3028	Belongs to the UPF0307 family
NQU90_01625	COG0312	modulator of DNA gyrase
NQU90_01630	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NQU90_01635	COG5007	Belongs to the BolA IbaG family
NQU90_01645	COG2854	intermembrane phospholipid transfer
NQU90_01650	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NQU90_01655	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NQU90_01660	COG1127	ABC transporter
NQU90_01665	COG0517	IMP dehydrogenase activity
NQU90_01665	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NQU90_01670	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NQU90_01675	COG3117	lipopolysaccharide transmembrane transporter activity
NQU90_01680	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
NQU90_01685	COG1137	ATPase activity
NQU90_01700	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_01705	COG1660	Displays ATPase and GTPase activities
NQU90_01710	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_01715	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NQU90_01720	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NQU90_01730	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NQU90_01735	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NQU90_01740	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NQU90_01745	COG0723	plastoquinol--plastocyanin reductase activity
NQU90_01750	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NQU90_01755	COG2857	Cytochrome c1
NQU90_01760	COG0625	glutathione transferase activity
NQU90_01765	COG2969	positive regulation of protein catabolic process
NQU90_01770	COG2823	Periplasmic or secreted lipoprotein
NQU90_01775	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NQU90_01780	COG0792	nuclease activity
NQU90_01785	COG3107	peptidoglycan biosynthetic process
NQU90_01790	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NQU90_01800	COG2001	Belongs to the MraZ family
NQU90_01805	COG0275	rRNA processing
NQU90_01810	COG3116	cell division
NQU90_01815	COG0768	penicillin binding
NQU90_01825	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NQU90_01830	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NQU90_01835	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NQU90_01840	COG0772	Belongs to the SEDS family
NQU90_01845	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NQU90_01850	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NQU90_01860	COG0849	cell division
NQU90_01865	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NQU90_01870	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
NQU90_01880	COG0653	protein targeting
NQU90_01885	COG0494	nUDIX hydrolase
NQU90_01890	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
NQU90_01895	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
NQU90_01910	COG1459	type II secretion system
NQU90_01915	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NQU90_01940	COG2186	Transcriptional regulator
NQU90_01945	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
NQU90_01950	COG0508	dehydrogenase complex catalyzes the overall conversion of
NQU90_01955	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NQU90_01965	COG0840	transmembrane signaling receptor activity
NQU90_01970	COG1752	Esterase of the alpha-beta hydrolase superfamily
NQU90_01975	COG1049	propionate catabolic process, 2-methylcitrate cycle
NQU90_01980	COG2200	EAL domain
NQU90_01990	COG0523	cobalamin synthesis protein
NQU90_01995	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_02010	COG0477	Major facilitator Superfamily
NQU90_02025	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NQU90_02030	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
NQU90_02055	COG3314	Sporulation integral membrane protein YlbJ
NQU90_02075	COG0165	Argininosuccinate lyase
NQU90_02080	COG0137	argininosuccinate synthase activity
NQU90_02090	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NQU90_02095	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NQU90_02105	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NQU90_02110	COG0110	maltose O-acetyltransferase activity
NQU90_02120	COG3706	GGDEF domain
NQU90_02125	COG0814	amino acid
NQU90_02130	COG3932	Exopolysaccharide synthesis, ExoD
NQU90_02140	COG3706	GGDEF domain
NQU90_02145	COG0004	ammonium transporteR
NQU90_02150	COG3133	Outer membrane lipoprotein
NQU90_02155	COG0456	acetyltransferase
NQU90_02175	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
NQU90_02180	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NQU90_02195	COG0671	phosphoesterase, PA-phosphatase related
NQU90_02200	COG0628	permease
NQU90_02205	COG3284	Transcriptional regulator
NQU90_02215	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
NQU90_02215	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_02215	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NQU90_02220	COG1461	Dihydroxyacetone kinase
NQU90_02225	COG2376	Dihydroxyacetone kinase
NQU90_02230	COG2252	PERMEase
NQU90_02235	COG1278	Cold shock
NQU90_02245	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NQU90_02260	COG3039	Transposase
NQU90_02265	COG0583	DNA-binding transcription factor activity
NQU90_02270	COG1486	melibiose metabolic process
NQU90_02280	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NQU90_02290	COG3039	Transposase
NQU90_02305	COG0732	type I restriction modification DNA specificity domain
NQU90_02325	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NQU90_02340	COG3047	cAMP biosynthetic process
NQU90_02345	COG0840	transmembrane signaling receptor activity
NQU90_02370	COG3135	benzoate transporter
NQU90_02375	COG1396	sequence-specific DNA binding
NQU90_02415	COG2926	Belongs to the UPF0265 family
NQU90_02425	COG0561	phosphatase activity
NQU90_02435	COG1058	Belongs to the CinA family
NQU90_02435	COG1546	Belongs to the CinA family
NQU90_02445	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
NQU90_02455	COG1522	sequence-specific DNA binding
NQU90_02460	COG1368	sulfuric ester hydrolase activity
NQU90_02495	COG4221	oxidoreductase activity
NQU90_02510	COG1979	alcohol dehydrogenase
NQU90_02515	COG1803	Methylglyoxal synthase
NQU90_02535	COG1444	tRNA N-acetyltransferase activity
NQU90_02540	COG1028	Short-chain dehydrogenase reductase Sdr
NQU90_02545	COG0784	Response regulator, receiver
NQU90_02545	COG0835	chemotaxis
NQU90_02555	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NQU90_02560	COG2949	membrane
NQU90_02565	COG3291	Pkd domain containing protein
NQU90_02570	COG0318	PFAM AMP-dependent synthetase and ligase
NQU90_02575	COG1441	menaquinone biosynthetic process
NQU90_02580	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NQU90_02585	COG0596	Alpha beta hydrolase
NQU90_02590	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
NQU90_02595	COG1169	isochorismate synthase
NQU90_02600	COG1575	Belongs to the MenA family. Type 1 subfamily
NQU90_02620	COG0513	Belongs to the DEAD box helicase family
NQU90_02625	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU90_02630	COG1988	membrane-bound metal-dependent
NQU90_02635	COG1671	Belongs to the UPF0178 family
NQU90_02655	COG0484	heat shock protein binding
NQU90_02660	COG3263	regulation of cellular component size
NQU90_02665	COG3722	fumarate hydratase activity
NQU90_02670	COG0246	Mannitol dehydrogenase
NQU90_02675	COG2213	PTS system mannitol-specific
NQU90_02675	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_02680	COG1560	Kdo2-lipid A biosynthetic process
NQU90_02685	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
NQU90_02685	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
NQU90_02690	COG1538	Outer membrane efflux protein
NQU90_02695	COG0494	nUDIX hydrolase
NQU90_02700	COG3151	Protein conserved in bacteria
NQU90_02710	COG3150	esterase
NQU90_02715	COG1051	belongs to the nudix hydrolase family
NQU90_02725	COG1566	PFAM secretion protein HlyD family protein
NQU90_02730	COG1289	transmembrane transporter activity
NQU90_02755	COG3104	oligopeptide transport
NQU90_02785	COG2084	Dehydrogenase
NQU90_02790	COG0583	DNA-binding transcription factor activity
NQU90_02795	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NQU90_02815	COG0204	Acyl-transferase
NQU90_02820	COG1842	Phage shock protein A
NQU90_02835	COG2827	Endonuclease containing a URI domain
NQU90_02850	COG1573	uracil-dna glycosylase
NQU90_02855	COG0697	spore germination
NQU90_02860	COG0583	DNA-binding transcription factor activity
NQU90_02865	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NQU90_02870	COG1121	(ABC) transporter
NQU90_02875	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
NQU90_02895	COG0739	heme binding
NQU90_02905	COG3068	Protein conserved in bacteria
NQU90_02925	COG0617	tRNA 3'-terminal CCA addition
NQU90_02930	COG1194	a g-specific adenine glycosylase
NQU90_02935	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
NQU90_02945	COG3111	PFAM Bacterial OB fold (BOF) protein
NQU90_02950	COG3240	lipase activity
NQU90_02955	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
NQU90_02955	COG2885	chlorophyll binding
NQU90_02960	COG3706	GGDEF domain
NQU90_02965	COG0557	exoribonuclease II activity
NQU90_02975	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NQU90_02985	COG2153	protein acetylation
NQU90_02990	COG0513	Belongs to the DEAD box helicase family
NQU90_02995	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
NQU90_03020	COG0735	belongs to the Fur family
NQU90_03025	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NQU90_03035	COG4221	oxidoreductase activity
NQU90_03050	COG1024	Enoyl-CoA hydratase
NQU90_03060	COG0110	maltose O-acetyltransferase activity
NQU90_03070	COG4166	transmembrane transport
NQU90_03080	COG0840	transmembrane signaling receptor activity
NQU90_03085	COG3385	transposase activity
NQU90_03090	COG0442	prolyl-tRNA aminoacylation
NQU90_03095	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NQU90_03100	COG2160	L-arabinose isomerase activity
NQU90_03110	COG1069	ribulokinase activity
NQU90_03115	COG1879	ABC-type sugar transport system periplasmic component
NQU90_03120	COG1129	ABC transporter
NQU90_03125	COG1172	Belongs to the binding-protein-dependent transport system permease family
NQU90_03140	COG3008	intermembrane lipid transfer
NQU90_03140	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NQU90_03145	COG2995	paraquat-inducible protein a
NQU90_03155	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU90_03165	COG3706	GGDEF domain
NQU90_03165	COG2203	Gaf domain
NQU90_03165	COG5001	Diguanylate cyclase
NQU90_03165	COG4251	negative regulation of phosphorylation
NQU90_03170	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
NQU90_03185	COG2771	luxR family
NQU90_03195	COG0840	transmembrane signaling receptor activity
NQU90_03200	COG0632	four-way junction helicase activity
NQU90_03205	COG2255	four-way junction helicase activity
NQU90_03215	COG1294	oxidase, subunit
NQU90_03220	COG4890	Cyd operon protein YbgT
NQU90_03225	COG3790	cyd operon protein YbgE
NQU90_03230	COG0824	Thioesterase
NQU90_03235	COG0811	peptide transport
NQU90_03250	COG0823	Involved in the tonB-independent uptake of proteins
NQU90_03255	COG2885	chlorophyll binding
NQU90_03260	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
NQU90_03325	COG0733	neurotransmitter:sodium symporter activity
NQU90_03335	COG0733	neurotransmitter:sodium symporter activity
NQU90_03350	COG0561	phosphatase activity
NQU90_03400	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NQU90_03405	COG1640	4-alpha-glucanotransferase
NQU90_03410	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NQU90_03420	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NQU90_03425	COG0840	transmembrane signaling receptor activity
NQU90_03430	COG1585	Membrane protein implicated in regulation of membrane protease activity
NQU90_03435	COG0330	HflC and HflK could
NQU90_03440	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NQU90_03440	COG1648	precorrin-2 dehydrogenase activity
NQU90_03445	COG0175	sulfate reduction
NQU90_03450	COG2895	sulfate adenylyltransferase (ATP) activity
NQU90_03455	COG0471	metal ion transport
NQU90_03455	COG3273	potassium ion transport
NQU90_03460	COG0529	Catalyzes the synthesis of activated sulfate
NQU90_03475	COG0840	transmembrane signaling receptor activity
NQU90_03495	COG1136	(ABC) transporter
NQU90_03510	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
NQU90_03525	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NQU90_03530	COG3437	response regulator, receiver
NQU90_03530	COG0784	Response regulator, receiver
NQU90_03540	COG2076	Multidrug Resistance protein
NQU90_03545	COG2076	Multidrug Resistance protein
NQU90_03550	COG0346	lactoylglutathione lyase activity
NQU90_03555	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NQU90_03560	COG1643	Atp-dependent helicase
NQU90_03570	COG1489	DNA binding
NQU90_03575	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NQU90_03580	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NQU90_03590	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NQU90_03595	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
NQU90_03600	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
NQU90_03610	COG1823	symporter activity
NQU90_03630	COG1924	4 iron, 4 sulfur cluster binding
NQU90_03635	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
NQU90_03640	COG0842	Transport permease protein
NQU90_03645	COG1131	(ABC) transporter
NQU90_03660	COG0163	prenyltransferase activity
NQU90_03665	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NQU90_03670	COG0671	phosphoesterase, PA-phosphatase related
NQU90_03675	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NQU90_03680	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NQU90_03680	COG1017	nitric oxide dioxygenase activity
NQU90_03685	COG1151	hydroxylamine reductase activity
NQU90_03690	COG0783	Belongs to the Dps family
NQU90_03695	COG3023	N-Acetylmuramoyl-L-alanine amidase
NQU90_03700	COG4807	Protein conserved in bacteria
NQU90_03710	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NQU90_03715	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NQU90_03720	COG3956	TIGRFAM MazG family protein
NQU90_03725	COG0504	CTP synthase activity
NQU90_03730	COG0148	phosphopyruvate hydratase activity
NQU90_03775	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NQU90_03785	COG0488	(ABC) transporter
NQU90_03805	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NQU90_03820	COG1794	racemase activity, acting on amino acids and derivatives
NQU90_03830	COG2731	YhcH YjgK YiaL family protein
NQU90_03840	COG0668	transmembrane transport
NQU90_03845	COG1376	ErfK ybiS ycfS ynhG family protein
NQU90_03855	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NQU90_03860	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NQU90_03865	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
NQU90_03875	COG0585	pseudouridine synthase activity
NQU90_03880	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
NQU90_03885	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NQU90_03890	COG1238	metal cluster binding
NQU90_03905	COG1902	pentaerythritol trinitrate reductase activity
NQU90_03920	COG2957	Belongs to the agmatine deiminase family
NQU90_03945	COG0513	Belongs to the DEAD box helicase family
NQU90_03955	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
NQU90_04000	COG2816	NAD+ diphosphatase activity
NQU90_04035	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NQU90_04045	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NQU90_04050	COG4991	sh3 domain protein
NQU90_04060	COG2816	NAD+ diphosphatase activity
NQU90_04065	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
NQU90_04070	COG1940	carbohydrate kinase activity
NQU90_04075	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NQU90_04080	COG0126	phosphoglycerate kinase activity
NQU90_04085	COG0191	fructose-bisphosphate aldolase activity
NQU90_04090	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU90_04135	COG0354	folic acid binding
NQU90_04140	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
NQU90_04150	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NQU90_04155	COG1595	DNA-templated transcription, initiation
NQU90_04160	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
NQU90_04165	COG3026	antisigma factor binding
NQU90_04175	COG0481	GTPase activity
NQU90_04180	COG0681	Belongs to the peptidase S26 family
NQU90_04195	COG1381	Involved in DNA repair and RecF pathway recombination
NQU90_04200	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NQU90_04210	COG2350	Protein conserved in bacteria
NQU90_04215	COG2917	probably involved in intracellular septation
NQU90_04220	COG0076	glutamate decarboxylase activity
NQU90_04225	COG1272	protein, Hemolysin III
NQU90_04230	COG2985	domain, Protein
NQU90_04230	COG0569	domain protein
NQU90_04255	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
NQU90_04290	COG2313	pseudouridylate synthase activity
NQU90_04295	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NQU90_04335	COG1765	OsmC-like protein
NQU90_04350	COG3954	Phosphoribulokinase
NQU90_04355	COG3089	Belongs to the UPF0270 family
NQU90_04365	COG5001	Diguanylate cyclase
NQU90_04365	COG4251	negative regulation of phosphorylation
NQU90_04365	COG2203	Gaf domain
NQU90_04365	COG3706	GGDEF domain
NQU90_04370	COG0429	hydrolase of the alpha beta-hydrolase fold
NQU90_04375	COG0784	Response regulator, receiver
NQU90_04375	COG0835	chemotaxis
NQU90_04385	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
NQU90_04390	COG1047	Peptidyl-prolyl cis-trans
NQU90_04405	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NQU90_04430	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NQU90_04440	COG3721	Heme iron utilization protein
NQU90_04445	COG0748	coenzyme F420 binding
NQU90_04470	COG2814	Major facilitator Superfamily
NQU90_04480	COG3655	Transcriptional regulator
NQU90_04490	COG2205	protein histidine kinase activity
NQU90_04490	COG0784	Response regulator, receiver
NQU90_04490	COG5002	protein histidine kinase activity
NQU90_04500	COG3706	GGDEF domain
NQU90_04515	COG3397	chitin binding
NQU90_04555	COG0835	chemotaxis
NQU90_04555	COG0784	Response regulator, receiver
NQU90_04560	COG2755	lipolytic protein G-D-S-L family
NQU90_04565	COG4181	ATPase activity
NQU90_04570	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
NQU90_04575	COG1090	epimerase
NQU90_04580	COG2200	EAL domain
NQU90_04585	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NQU90_04590	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NQU90_04595	COG3171	Protein conserved in bacteria
NQU90_04600	COG2066	Belongs to the glutaminase family
NQU90_04605	COG2897	thiosulfate sulfurtransferase activity
NQU90_04620	COG0521	Mo-molybdopterin cofactor biosynthetic process
NQU90_04630	COG2966	Psort location CytoplasmicMembrane, score
NQU90_04635	COG3610	response to peptide
NQU90_04645	COG0175	sulfate reduction
NQU90_04650	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NQU90_04655	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NQU90_04665	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NQU90_04680	COG0786	glutamate:sodium symporter activity
NQU90_04685	COG0252	asparaginase activity
NQU90_04690	COG3139	Protein of unknown function (DUF1315)
NQU90_04710	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NQU90_04715	COG0321	lipoyl(octanoyl) transferase activity
NQU90_04720	COG2921	Belongs to the UPF0250 family
NQU90_04725	COG1686	Belongs to the peptidase S11 family
NQU90_04730	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NQU90_04735	COG2951	lytic endotransglycosylase activity
NQU90_04740	COG0772	Belongs to the SEDS family
NQU90_04745	COG0768	penicillin binding
NQU90_04750	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NQU90_04755	COG0799	negative regulation of ribosome biogenesis
NQU90_04760	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NQU90_04775	COG0495	leucyl-tRNA aminoacylation
NQU90_04780	COG2888	peptidyl-tyrosine sulfation
NQU90_04790	COG0312	modulator of DNA gyrase
NQU90_04795	COG0312	modulator of DNA gyrase
NQU90_04800	COG0716	FMN binding
NQU90_04805	COG4974	Belongs to the 'phage' integrase family
NQU90_04810	COG1970	mechanosensitive ion channel activity
NQU90_04820	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NQU90_04830	COG0815	Transfers the fatty acyl group on membrane lipoproteins
NQU90_04835	COG4535	Mg2 and Co2 transporter CorC
NQU90_04840	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NQU90_04845	COG1702	phosphate starvation-inducible protein PhoH
NQU90_04850	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NQU90_04855	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NQU90_04860	COG1335	isochorismatase
NQU90_04870	COG3706	GGDEF domain
NQU90_04875	COG0583	DNA-binding transcription factor activity
NQU90_04895	COG5002	protein histidine kinase activity
NQU90_04895	COG5001	Diguanylate cyclase
NQU90_04895	COG3447	MASE1 domain protein
NQU90_04905	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NQU90_04915	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NQU90_04925	COG0516	GMP reductase activity
NQU90_04935	COG0642	Histidine kinase
NQU90_04950	COG4221	oxidoreductase activity
NQU90_04960	COG1022	Amp-dependent synthetase and ligase
NQU90_04975	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU90_04990	COG3214	Protein conserved in bacteria
NQU90_05000	COG2195	Cleaves the N-terminal amino acid of tripeptides
NQU90_05005	COG0700	Nucleoside recognition
NQU90_05010	COG3366	ferrous iron transmembrane transporter activity
NQU90_05015	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
NQU90_05020	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
NQU90_05025	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NQU90_05030	COG1053	succinate dehydrogenase
NQU90_05040	COG0584	glycerophosphoryl diester phosphodiesterase
NQU90_05045	COG3264	Mechanosensitive ion channel
NQU90_05045	COG1511	domain protein
NQU90_05055	COG0739	heme binding
NQU90_05065	COG0583	DNA-binding transcription factor activity
NQU90_05085	COG0583	DNA-binding transcription factor activity
NQU90_05090	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
NQU90_05120	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NQU90_05125	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NQU90_05135	COG0338	D12 class N6 adenine-specific DNA methyltransferase
NQU90_05140	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NQU90_05150	COG0180	Tryptophanyl-tRNA synthetase
NQU90_05165	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NQU90_05175	COG1012	belongs to the aldehyde dehydrogenase family
NQU90_05190	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU90_05200	COG0674	pyruvate-flavodoxin oxidoreductase activity
NQU90_05200	COG1013	pyruvate-flavodoxin oxidoreductase activity
NQU90_05200	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
NQU90_05200	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU90_05205	COG0366	Alpha amylase catalytic
NQU90_05225	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
NQU90_05285	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NQU90_05290	COG1085	galactose-1-phosphate uridylyltransferase
NQU90_05295	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NQU90_05300	COG1609	Transcriptional regulator
NQU90_05305	COG4580	involved in the transport of maltose and maltodextrins
NQU90_05330	COG2182	Extracellular solute-binding protein
NQU90_05335	COG1175	transmembrane transport
NQU90_05340	COG3833	ABC-type maltose transport systems, permease component
NQU90_05345	COG3867	Arabinogalactan endo-beta-1,4-galactanase
NQU90_05350	COG1874	Beta-galactosidase
NQU90_05355	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU90_05355	COG1263	PTS System
NQU90_05365	COG0469	pyruvate kinase activity
NQU90_05380	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_05385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_05435	COG3039	Transposase
NQU90_05480	COG5377	YqaJ viral recombinase family
NQU90_05490	COG0012	GTP binding
NQU90_05495	COG0193	aminoacyl-tRNA hydrolase activity
NQU90_05500	COG0737	Belongs to the 5'-nucleotidase family
NQU90_05505	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NQU90_05515	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NQU90_05520	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
NQU90_05525	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
NQU90_05530	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NQU90_05535	COG2890	protein-(glutamine-N5) methyltransferase activity
NQU90_05545	COG2912	Transglutaminase-like superfamily
NQU90_05550	COG2877	3-deoxy-8-phosphooctulonate synthase activity
NQU90_05565	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NQU90_05580	COG1881	PFAM PEBP family protein
NQU90_05585	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NQU90_05600	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
NQU90_05610	COG0583	DNA-binding transcription factor activity
NQU90_05615	COG1028	Short-chain dehydrogenase reductase Sdr
NQU90_05620	COG0616	signal peptide processing
NQU90_05625	COG2211	Major facilitator Superfamily
NQU90_05635	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
NQU90_05645	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU90_05650	COG0826	peptidase U32
NQU90_05655	COG0464	growth
NQU90_05675	COG2916	Histone family protein nucleoid-structuring protein H-NS
NQU90_05695	COG0659	secondary active sulfate transmembrane transporter activity
NQU90_05705	COG2197	response regulator
NQU90_05710	COG3447	MASE1 domain protein
NQU90_05710	COG5001	Diguanylate cyclase
NQU90_05710	COG5002	protein histidine kinase activity
NQU90_05720	COG0840	transmembrane signaling receptor activity
NQU90_05725	COG3039	Transposase
NQU90_05735	COG2855	membrane
NQU90_05745	COG2197	response regulator
NQU90_05750	COG3604	Transcriptional regulator
NQU90_05755	COG0426	domain, Protein
NQU90_05755	COG1773	rubredoxin
NQU90_05760	COG0446	pyridine nucleotide-disulphide oxidoreductase
NQU90_05775	COG2197	response regulator
NQU90_05785	COG2223	nitrite transmembrane transporter activity
NQU90_05790	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
NQU90_05795	COG1140	nitrate reductase beta subunit
NQU90_05800	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
NQU90_05805	COG2181	nitrate reductase activity
NQU90_05845	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
NQU90_05850	COG3604	Transcriptional regulator
NQU90_05935	COG3724	N-succinylarginine dihydrolase activity
NQU90_05955	COG0840	transmembrane signaling receptor activity
NQU90_05965	COG2971	BadF BadG BcrA BcrD
NQU90_05975	COG4608	Belongs to the ABC transporter superfamily
NQU90_05980	COG0444	Belongs to the ABC transporter superfamily
NQU90_05985	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NQU90_06000	COG0784	Response regulator, receiver
NQU90_06000	COG2205	protein histidine kinase activity
NQU90_06030	COG3220	belongs to the UPF0276 family
NQU90_06065	COG1289	transmembrane transporter activity
NQU90_06070	COG0303	'Molybdopterin
NQU90_06075	COG0746	molybdenum cofactor guanylyltransferase activity
NQU90_06085	COG4662	Binding-protein-dependent transport system inner membrane component
NQU90_06095	COG2204	response regulator
NQU90_06100	COG3852	Histidine kinase
NQU90_06110	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NQU90_06140	COG3383	formate dehydrogenase (NAD+) activity
NQU90_06140	COG3383	formate dehydrogenase (NAD+) activity
NQU90_06145	COG0437	4 iron, 4 sulfur cluster binding
NQU90_06165	COG0281	malic enzyme
NQU90_06185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU90_06220	COG1737	Transcriptional regulator
NQU90_06225	COG0469	pyruvate kinase activity
NQU90_06245	COG1677	Flagellar hook-basal body complex protein FliE
NQU90_06255	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NQU90_06310	COG1684	flagellar biosynthetic protein fliR
NQU90_06320	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NQU90_06345	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
NQU90_06350	COG0784	Response regulator, receiver
NQU90_06350	COG2198	Histidine kinase
NQU90_06350	COG0643	Histidine kinase
NQU90_06360	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NQU90_06365	COG1360	Flagellar Motor Protein
NQU90_06370	COG1192	Involved in chromosome partitioning
NQU90_06380	COG0835	chemotaxis
NQU90_06395	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NQU90_06400	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NQU90_06405	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NQU90_06410	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
NQU90_06415	COG1138	Cytochrome C-type biogenesis protein
NQU90_06420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NQU90_06425	COG3088	subunit of a heme lyase
NQU90_06425	COG4235	cytochrome complex assembly
NQU90_06445	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NQU90_06450	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NQU90_06460	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NQU90_06465	COG1882	Formate acetyltransferase
NQU90_06475	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NQU90_06475	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NQU90_06480	COG0259	pyridoxamine-phosphate oxidase activity
NQU90_06505	COG2850	peptidyl-arginine hydroxylation
NQU90_06510	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NQU90_06515	COG2915	High frequency lysogenization protein hflD homolog
NQU90_06520	COG0482	sulfurtransferase activity
NQU90_06530	COG1187	pseudouridine synthase activity
NQU90_06540	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU90_06545	COG2271	Major facilitator Superfamily
NQU90_06550	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_06550	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU90_06550	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU90_06575	COG0783	Belongs to the Dps family
NQU90_06585	COG2801	Transposase and inactivated derivatives
NQU90_06595	COG0813	purine-nucleoside phosphorylase activity
NQU90_06620	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NQU90_06645	COG5642	Protein of unknown function (DUF2384)
NQU90_06650	COG3039	Transposase
NQU90_06690	COG1342	Belongs to the UPF0251 family
NQU90_06705	COG1309	transcriptional regulator
NQU90_06710	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_06715	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_06725	COG1091	dTDP-4-dehydrorhamnose reductase activity
NQU90_06770	COG1215	transferase activity, transferring glycosyl groups
NQU90_06795	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NQU90_06805	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
NQU90_06820	COG1538	Outer membrane efflux protein
NQU90_06825	COG1136	(ABC) transporter
NQU90_06825	COG0577	efflux transmembrane transporter activity
NQU90_06830	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_06835	COG1227	inorganic diphosphatase activity
NQU90_06845	COG0497	DNA recombination
NQU90_06850	COG1486	melibiose metabolic process
NQU90_06855	COG0583	DNA-binding transcription factor activity
NQU90_06860	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NQU90_06865	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NQU90_06870	COG0443	Heat shock 70 kDa protein
NQU90_06875	COG0484	heat shock protein binding
NQU90_06880	COG1285	pathogenesis
NQU90_06890	COG0446	pyridine nucleotide-disulphide oxidoreductase
NQU90_06930	COG0577	efflux transmembrane transporter activity
NQU90_06930	COG1136	(ABC) transporter
NQU90_06940	COG0577	efflux transmembrane transporter activity
NQU90_06940	COG1136	(ABC) transporter
NQU90_06945	COG0577	efflux transmembrane transporter activity
NQU90_06945	COG1136	(ABC) transporter
NQU90_06955	COG0095	Lipoate-protein ligase
NQU90_06965	COG0702	epimerase
NQU90_06970	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NQU90_06975	COG1454	alcohol dehydrogenase
NQU90_06985	COG0564	pseudouridine synthase activity
NQU90_07015	COG1280	lysine exporter protein (LysE YggA)
NQU90_07030	COG3263	regulation of cellular component size
NQU90_07040	COG1876	peptidase activity
NQU90_07045	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NQU90_07050	COG1393	Belongs to the ArsC family
NQU90_07060	COG3069	C4-dicarboxylate transmembrane transporter activity
NQU90_07065	COG1473	amidohydrolase
NQU90_07075	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
NQU90_07085	COG0017	Asparaginyl-tRNA synthetase
NQU90_07100	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NQU90_07105	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
NQU90_07110	COG0156	8-amino-7-oxononanoate synthase activity
NQU90_07115	COG1073	alpha beta
NQU90_07115	COG2226	methyltransferase
NQU90_07120	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
NQU90_07125	COG0501	Belongs to the peptidase M48B family
NQU90_07135	COG0675	Transposase, IS605 OrfB family
NQU90_07150	COG0633	Ferredoxin
NQU90_07150	COG3217	Mosc domain protein beta barrel domain protein
NQU90_07150	COG0633	Ferredoxin
NQU90_07150	COG3217	Mosc domain protein beta barrel domain protein
NQU90_07165	COG0674	pyruvate-flavodoxin oxidoreductase activity
NQU90_07165	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NQU90_07165	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
NQU90_07165	COG1013	pyruvate-flavodoxin oxidoreductase activity
NQU90_07175	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NQU90_07180	COG1607	acyl-coa hydrolase
NQU90_07190	COG3021	interspecies interaction between organisms
NQU90_07195	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
NQU90_07200	COG2027	D-alanyl-D-alanine carboxypeptidase
NQU90_07205	COG1061	Type III restriction enzyme res subunit
NQU90_07210	COG1566	PFAM secretion protein HlyD family protein
NQU90_07220	COG1966	Carbon starvation protein
NQU90_07225	COG3279	Response regulator of the LytR AlgR family
NQU90_07230	COG3275	phosphorelay sensor kinase activity
NQU90_07235	COG2199	diguanylate cyclase activity
NQU90_07235	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU90_07245	COG1940	carbohydrate kinase activity
NQU90_07245	COG1846	Transcriptional regulator
NQU90_07250	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NQU90_07255	COG0363	glucosamine-6-phosphate deaminase activity
NQU90_07260	COG2190	(PTS) system
NQU90_07260	COG1263	PTS System
NQU90_07260	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU90_07270	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NQU90_07275	COG0735	belongs to the Fur family
NQU90_07285	COG0716	FMN binding
NQU90_07300	COG0596	Alpha beta hydrolase
NQU90_07305	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
NQU90_07310	COG0033	Phosphoglucomutase
NQU90_07320	COG1846	Transcriptional regulator
NQU90_07325	COG2951	lytic endotransglycosylase activity
NQU90_07330	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NQU90_07335	COG4136	ATPase activity
NQU90_07345	COG4134	Bacterial extracellular solute-binding protein
NQU90_07355	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NQU90_07365	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NQU90_07375	COG0729	surface antigen
NQU90_07380	COG2911	Protein conserved in bacteria
NQU90_07400	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NQU90_07410	COG0741	lytic transglycosylase activity
NQU90_07420	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NQU90_07425	COG4771	TonB-dependent receptor
NQU90_07430	COG1169	isochorismate synthase
NQU90_07435	COG1021	2,3-dihydroxybenzoate-AMP ligase
NQU90_07440	COG1535	isochorismatase
NQU90_07440	COG3433	isochorismatase activity
NQU90_07445	COG1028	Short-chain dehydrogenase reductase Sdr
NQU90_07450	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
NQU90_07450	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NQU90_07475	COG1278	Cold shock
NQU90_07500	COG4166	transmembrane transport
NQU90_07505	COG1349	DNA-binding transcription factor activity
NQU90_07515	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NQU90_07520	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NQU90_07530	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU90_07545	COG4166	transmembrane transport
NQU90_07550	COG0622	Phosphoesterase
NQU90_07565	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
NQU90_07570	COG0835	chemotaxis
NQU90_07570	COG0784	Response regulator, receiver
NQU90_07575	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NQU90_07580	COG1815	bacterial-type flagellum-dependent cell motility
NQU90_07600	COG4787	bacterial-type flagellum-dependent cell motility
NQU90_07610	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
NQU90_07615	COG1706	bacterial-type flagellum-dependent cell motility
NQU90_07620	COG3951	Flagellar rod assembly protein muramidase FlgJ
NQU90_07620	COG1705	Flagellar rod assembly protein muramidase FlgJ
NQU90_07630	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NQU90_07635	COG2239	Acts as a magnesium transporter
NQU90_07645	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NQU90_07650	COG2716	regulation of RNA biosynthetic process
NQU90_07675	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NQU90_07680	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NQU90_07685	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
NQU90_07690	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NQU90_07710	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NQU90_07725	COG0590	tRNA wobble adenosine to inosine editing
NQU90_07730	COG0573	inorganic phosphate transmembrane transporter activity
NQU90_07735	COG0581	inorganic phosphate transmembrane transporter activity
NQU90_07740	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NQU90_07745	COG0704	Plays a role in the regulation of phosphate uptake
NQU90_07750	COG1253	flavin adenine dinucleotide binding
NQU90_07765	COG0531	amino acid
NQU90_07780	COG1126	abc transporter atp-binding protein
NQU90_07795	COG0765	amino acid transport
NQU90_07800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU90_07805	COG2199	diguanylate cyclase activity
NQU90_07805	COG2203	Gaf domain
NQU90_07810	COG2271	Major facilitator Superfamily
NQU90_07820	COG2197	response regulator
NQU90_07825	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NQU90_07845	COG1785	Belongs to the alkaline phosphatase family
NQU90_07850	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NQU90_07855	COG0123	including yeast histone deacetylase and acetoin utilization protein
NQU90_07865	COG1199	ATP-dependent helicase activity
NQU90_07870	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NQU90_07900	COG0346	lactoylglutathione lyase activity
NQU90_07905	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NQU90_07910	COG4660	Part of a membrane complex involved in electron transport
NQU90_07915	COG4659	FMN binding
NQU90_07920	COG4658	electron transport chain
NQU90_07930	COG2878	Part of a membrane complex involved in electron transport
NQU90_07935	COG4657	Part of a membrane complex involved in electron transport
NQU90_07940	COG1061	Type III restriction enzyme res subunit
NQU90_07950	COG0346	lactoylglutathione lyase activity
NQU90_07965	COG1187	pseudouridine synthase activity
NQU90_07970	COG2807	transmembrane transport
NQU90_07975	COG0583	DNA-binding transcription factor activity
NQU90_07990	COG2979	Protein of unknown function (DUF533)
NQU90_08000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NQU90_08010	COG1294	oxidase, subunit
NQU90_08030	COG3220	belongs to the UPF0276 family
NQU90_08045	COG2249	NAD(P)H dehydrogenase (quinone) activity
NQU90_08050	COG2814	Major facilitator Superfamily
NQU90_08055	COG0656	L-ascorbic acid biosynthetic process
NQU90_08080	COG0583	DNA-binding transcription factor activity
NQU90_08090	COG0840	transmembrane signaling receptor activity
NQU90_08095	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NQU90_08100	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NQU90_08105	COG2271	Major facilitator Superfamily
NQU90_08110	COG1349	DNA-binding transcription factor activity
NQU90_08120	COG0584	glycerophosphoryl diester phosphodiesterase
NQU90_08125	COG4574	serine-type endopeptidase inhibitor activity
NQU90_08130	COG3085	chromosome segregation
NQU90_08135	COG0583	DNA-binding transcription factor activity
NQU90_08145	COG1448	Aminotransferase
NQU90_08160	COG2333	competence protein COMEC
NQU90_08160	COG0658	competence protein
NQU90_08170	COG1663	tetraacyldisaccharide 4'-kinase activity
NQU90_08175	COG2835	tetraacyldisaccharide 4'-kinase activity
NQU90_08180	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
NQU90_08185	COG2197	response regulator
NQU90_08190	COG0322	excinuclease ABC activity
NQU90_08240	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NQU90_08250	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NQU90_08255	COG0215	cysteine-tRNA ligase activity
NQU90_08300	COG2119	membrane
NQU90_08305	COG0023	Translation Initiation Factor
NQU90_08330	COG0513	Belongs to the DEAD box helicase family
NQU90_08340	COG0493	'glutamate synthase
NQU90_08345	COG0067	glutamate synthase
NQU90_08345	COG0069	glutamate synthase activity
NQU90_08345	COG0070	glutamate synthase
NQU90_08350	COG1242	4 iron, 4 sulfur cluster binding
NQU90_08395	COG3634	alkyl hydroperoxide reductase activity
NQU90_08405	COG0517	IMP dehydrogenase activity
NQU90_08410	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
NQU90_08415	COG0343	queuine tRNA-ribosyltransferase activity
NQU90_08420	COG1862	Preprotein translocase
NQU90_08425	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NQU90_08430	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NQU90_08445	COG0826	peptidase U32
NQU90_08450	COG0826	peptidase U32
NQU90_08455	COG3154	lipid carrier protein
NQU90_08475	COG1104	cysteine desulfurase activity
NQU90_08480	COG0822	iron-sulfur transferase activity
NQU90_08490	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
NQU90_08495	COG0443	Heat shock 70 kDa protein
NQU90_08500	COG0633	Ferredoxin
NQU90_08515	COG0105	UTP biosynthetic process
NQU90_08520	COG0820	rRNA (adenine-C2-)-methyltransferase activity
NQU90_08535	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NQU90_08540	COG0124	histidyl-tRNA synthetase
NQU90_08545	COG2976	Protein conserved in bacteria
NQU90_08550	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NQU90_08555	COG1160	GTP binding
NQU90_08560	COG1645	bacterial-type flagellum-dependent swarming motility
NQU90_08565	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
NQU90_08570	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NQU90_08570	COG0047	phosphoribosylformylglycinamidine synthase activity
NQU90_08575	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU90_08575	COG2199	diguanylate cyclase activity
NQU90_08590	COG1007	ATP synthesis coupled electron transport
NQU90_08595	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU90_08605	COG0713	ATP synthesis coupled electron transport
NQU90_08610	COG0839	Belongs to the complex I subunit 6 family
NQU90_08615	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU90_08620	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
NQU90_08625	COG1034	ATP synthesis coupled electron transport
NQU90_08640	COG0649	NAD binding
NQU90_08640	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU90_08645	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU90_08650	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU90_08670	COG1770	oligopeptidase
NQU90_08675	COG4771	TonB-dependent receptor
NQU90_08680	COG1360	Flagellar Motor Protein
NQU90_08685	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NQU90_08690	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NQU90_08695	COG5433	transposase activity
NQU90_08705	COG3039	Transposase
NQU90_08710	COG4974	Belongs to the 'phage' integrase family
NQU90_08715	COG1401	restriction endodeoxyribonuclease activity
NQU90_08740	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
NQU90_08750	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
NQU90_08755	COG4597	amino acid ABC transporter
NQU90_08760	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU90_08765	COG0765	amino acid transport
NQU90_08770	COG1126	abc transporter atp-binding protein
NQU90_08780	COG0724	RNA recognition motif
NQU90_08785	COG4989	oxidoreductase activity
NQU90_08810	COG3437	response regulator, receiver
NQU90_08815	COG0583	DNA-binding transcription factor activity
NQU90_08820	COG3300	MHYT domain
NQU90_08820	COG5001	Diguanylate cyclase
NQU90_08825	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
NQU90_08845	COG2814	Major facilitator Superfamily
NQU90_08860	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NQU90_08865	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
NQU90_08870	COG0539	negative regulation of cytoplasmic translation
NQU90_08875	COG0776	regulation of translation
NQU90_08885	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
NQU90_08905	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NQU90_08910	COG0602	queuosine metabolic process
NQU90_08915	COG3530	Putative quorum-sensing-regulated virulence factor
NQU90_08920	COG2096	Adenosyltransferase
NQU90_08925	COG2916	Histone family protein nucleoid-structuring protein H-NS
NQU90_08930	COG1757	Na H antiporter
NQU90_08935	COG1435	thymidine kinase activity
NQU90_08955	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NQU90_08960	COG0326	Molecular chaperone. Has ATPase activity
NQU90_08965	COG4172	Belongs to the ABC transporter superfamily
NQU90_08970	COG4172	Belongs to the ABC transporter superfamily
NQU90_08980	COG4168	peptide transport system, permease
NQU90_08990	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
NQU90_08995	COG1842	Phage shock protein A
NQU90_09010	COG3106	COG3106 Predicted ATPase
NQU90_09015	COG3768	UPF0283 membrane protein
NQU90_09020	COG0583	DNA-binding transcription factor activity
NQU90_09025	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
NQU90_09030	COG3842	ATPase activity
NQU90_09035	COG1176	ABC-type spermidine putrescine transport system, permease component I
NQU90_09040	COG1177	transmembrane transport
NQU90_09045	COG1012	belongs to the aldehyde dehydrogenase family
NQU90_09055	COG2154	pterin-4-alpha-carbinolamine dehydratase
NQU90_09075	COG2199	diguanylate cyclase activity
NQU90_09080	COG2885	chlorophyll binding
NQU90_09085	COG0861	Integral membrane protein TerC family
NQU90_09115	COG2910	NAD(P)H-binding
NQU90_09120	COG0583	DNA-binding transcription factor activity
NQU90_09125	COG0583	DNA-binding transcription factor activity
NQU90_09130	COG2271	Major facilitator Superfamily
NQU90_09140	COG1335	isochorismatase
NQU90_09150	COG0583	DNA-binding transcription factor activity
NQU90_09155	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NQU90_09165	COG0583	DNA-binding transcription factor activity
NQU90_09170	COG2723	6-phospho-beta-galactosidase activity
NQU90_09175	COG1944	ATP diphosphatase activity
NQU90_09180	COG2116	formate transmembrane transporter activity
NQU90_09185	COG1882	Formate acetyltransferase
NQU90_09190	COG2983	Belongs to the UPF0260 family
NQU90_09210	COG0058	SHG alpha-glucan phosphorylase activity
NQU90_09215	COG0471	metal ion transport
NQU90_09220	COG3118	belongs to the thioredoxin family
NQU90_09230	COG1132	(ABC) transporter
NQU90_09235	COG1132	(ABC) transporter
NQU90_09245	COG2501	S4 domain
NQU90_09260	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NQU90_09300	COG2009	succinate dehydrogenase
NQU90_09305	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
NQU90_09310	COG1053	succinate dehydrogenase
NQU90_09320	COG0567	Dehydrogenase, E1 component
NQU90_09325	COG0508	dehydrogenase complex catalyzes the overall conversion of
NQU90_09330	COG0045	succinate-CoA ligase (ADP-forming) activity
NQU90_09340	COG5433	transposase activity
NQU90_09355	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU90_09365	COG3842	ATPase activity
NQU90_09370	COG1840	ABC-type Fe3 transport system, periplasmic component
NQU90_09380	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NQU90_09385	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NQU90_09390	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU90_09395	COG4235	cytochrome complex assembly
NQU90_09395	COG3088	subunit of a heme lyase
NQU90_09405	COG1138	Cytochrome C-type biogenesis protein
NQU90_09410	COG3301	Polysulphide reductase, NrfD
NQU90_09415	COG0437	4 iron, 4 sulfur cluster binding
NQU90_09420	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
NQU90_09435	COG0247	lactate metabolic process
NQU90_09440	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
NQU90_09445	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
NQU90_09450	COG3012	SEC-C Motif Domain Protein
NQU90_09455	COG0840	transmembrane signaling receptor activity
NQU90_09460	COG1940	carbohydrate kinase activity
NQU90_09460	COG1846	Transcriptional regulator
NQU90_09465	COG3148	PFAM DTW domain containing protein
NQU90_09470	COG0730	response to heat
NQU90_09475	COG0583	DNA-binding transcription factor activity
NQU90_09490	COG3593	DNA synthesis involved in DNA repair
NQU90_09530	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NQU90_09535	COG1011	Hydrolase
NQU90_09550	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NQU90_09555	COG2832	Protein of unknown function (DUF454)
NQU90_09560	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NQU90_09570	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NQU90_09575	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
NQU90_09590	COG1560	Kdo2-lipid A biosynthetic process
NQU90_09595	COG1560	Kdo2-lipid A biosynthetic process
NQU90_09620	COG0417	DNA replication proofreading
NQU90_09635	COG1451	nucleotide metabolic process
NQU90_09650	COG3069	C4-dicarboxylate transmembrane transporter activity
NQU90_09665	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
NQU90_09665	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU90_09670	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NQU90_09680	COG0569	domain protein
NQU90_09680	COG2985	domain, Protein
NQU90_09695	COG0556	nucleotide-excision repair
NQU90_09705	COG0586	Pfam SNARE associated Golgi protein
NQU90_09710	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
NQU90_09715	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NQU90_09730	COG4681	YaeQ
NQU90_09740	COG2932	Transcriptional regulator
NQU90_09855	COG0640	Transcriptional regulator
NQU90_09865	COG4373	Mu-like prophage FluMu protein gp28
NQU90_09870	COG4383	Mu-like prophage protein gp29
NQU90_09910	COG4388	Caudovirus prohead serine protease
NQU90_09915	COG4397	Mu-like prophage major head subunit gpT
NQU90_10005	COG3829	transcription factor binding
NQU90_10050	COG0307	riboflavin synthase, alpha
NQU90_10060	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU90_10065	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NQU90_10070	COG0697	spore germination
NQU90_10075	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NQU90_10120	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NQU90_10125	COG3099	Belongs to the UPF0263 family
NQU90_10130	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
NQU90_10135	COG2894	cell division
NQU90_10140	COG0850	regulation of cytokinetic process
NQU90_10145	COG3100	YcgL domain-containing protein
NQU90_10150	COG1760	l-serine dehydratase
NQU90_10155	COG1760	l-serine dehydratase
NQU90_10160	COG3123	guanosine phosphorylase activity
NQU90_10165	COG1301	dicarboxylic acid transport
NQU90_10170	COG0205	6-phosphofructokinase activity
NQU90_10180	COG1434	Gram-negative-bacterium-type cell wall biogenesis
NQU90_10185	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NQU90_10195	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
NQU90_10200	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
NQU90_10210	COG5433	transposase activity
NQU90_10245	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NQU90_10250	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NQU90_10255	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NQU90_10265	COG0549	Belongs to the carbamate kinase family
NQU90_10270	COG0697	spore germination
NQU90_10275	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
NQU90_10275	COG3608	succinylglutamate desuccinylase aspartoacylase
NQU90_10280	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NQU90_10285	COG2068	MobA-Related Protein
NQU90_10290	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU90_10290	COG0493	'glutamate synthase
NQU90_10295	COG0402	S-adenosylhomocysteine deaminase activity
NQU90_10300	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NQU90_10305	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NQU90_10305	COG2080	2 iron, 2 sulfur cluster binding
NQU90_10310	COG2233	PERMEase
NQU90_10315	COG0402	S-adenosylhomocysteine deaminase activity
NQU90_10320	COG2252	PERMEase
NQU90_10325	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NQU90_10330	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NQU90_10335	COG2080	2 iron, 2 sulfur cluster binding
NQU90_10340	COG3134	Outer membrane lipoprotein
NQU90_10350	COG1288	antiporter activity
NQU90_10355	COG3039	Transposase
NQU90_10360	COG0318	PFAM AMP-dependent synthetase and ligase
NQU90_10365	COG2199	diguanylate cyclase activity
NQU90_10380	COG3039	Transposase
NQU90_10385	COG5433	transposase activity
NQU90_10395	COG0107	imidazoleglycerol-phosphate synthase activity
NQU90_10400	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
NQU90_10405	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NQU90_10410	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NQU90_10410	COG0131	Imidazoleglycerol-phosphate dehydratase
NQU90_10415	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NQU90_10420	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NQU90_10425	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NQU90_10435	COG1199	ATP-dependent helicase activity
NQU90_10440	COG1214	PFAM Peptidase M22, glycoprotease
NQU90_10450	COG2267	carboxylic ester hydrolase activity
NQU90_10455	COG0318	PFAM AMP-dependent synthetase and ligase
NQU90_10465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NQU90_10470	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
NQU90_10475	COG0709	Synthesizes selenophosphate from selenide and ATP
NQU90_10490	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NQU90_10495	COG0840	transmembrane signaling receptor activity
NQU90_10500	COG1254	Belongs to the acylphosphatase family
NQU90_10510	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU90_10510	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU90_10515	COG0489	protein tyrosine kinase activity
NQU90_10520	COG0572	uridine kinase
NQU90_10525	COG0717	Belongs to the dCTP deaminase family
NQU90_10530	COG0306	phosphate transporter
NQU90_10540	COG1530	ribonuclease E activity
NQU90_10555	COG0424	maF-like protein
NQU90_10560	COG1399	metal-binding, possibly nucleic acid-binding protein
NQU90_10565	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NQU90_10570	COG0416	fatty acid biosynthetic process
NQU90_10575	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NQU90_10585	COG1028	Short-chain dehydrogenase reductase Sdr
NQU90_10590	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NQU90_10595	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NQU90_10600	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NQU90_10605	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NQU90_10610	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NQU90_10615	COG0470	DNA polymerase III
NQU90_10620	COG0084	hydrolase, TatD family'
NQU90_10635	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NQU90_10635	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
NQU90_10640	COG3008	intermembrane lipid transfer
NQU90_10645	COG2995	paraquat-inducible protein a
NQU90_10655	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
NQU90_10660	COG0372	Belongs to the citrate synthase family
NQU90_10705	COG4221	oxidoreductase activity
NQU90_10710	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
NQU90_10715	COG3141	response to X-ray
NQU90_10725	COG3039	Transposase
NQU90_10740	COG1067	ATP-dependent peptidase activity
NQU90_10745	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NQU90_10755	COG0488	(ABC) transporter
NQU90_10765	COG0116	Belongs to the methyltransferase superfamily
NQU90_10765	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NQU90_10770	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NQU90_10775	COG0254	rRNA binding
NQU90_10780	COG3039	Transposase
NQU90_10790	COG0167	dihydroorotate dehydrogenase activity
NQU90_10795	COG2902	Dehydrogenase
NQU90_10805	COG0308	aminopeptidase N
NQU90_10815	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
NQU90_10820	COG1956	GAF domain-containing protein
NQU90_10830	COG3278	Belongs to the heme-copper respiratory oxidase family
NQU90_10845	COG2010	Cytochrome c
NQU90_10855	COG2217	Heavy metal translocating P-type atpase
NQU90_10870	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NQU90_10875	COG0589	response to stress
NQU90_10880	COG0037	tRNA processing
NQU90_10905	COG1177	transmembrane transport
NQU90_10920	COG5654	RES domain protein
NQU90_10930	COG1869	D-ribose catabolic process
NQU90_10935	COG1129	ABC transporter
NQU90_10940	COG1172	Belongs to the binding-protein-dependent transport system permease family
NQU90_10945	COG1879	ABC-type sugar transport system periplasmic component
NQU90_10950	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NQU90_10955	COG1609	Transcriptional regulator
NQU90_10960	COG5001	Diguanylate cyclase
NQU90_10960	COG3300	MHYT domain
NQU90_10985	COG0784	Response regulator, receiver
NQU90_10985	COG2205	protein histidine kinase activity
NQU90_10990	COG0776	regulation of translation
NQU90_10995	COG0072	phenylalanine-tRNA ligase activity
NQU90_10995	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU90_11000	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NQU90_11005	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NQU90_11010	COG0291	Belongs to the bacterial ribosomal protein bL35 family
NQU90_11015	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NQU90_11020	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NQU90_11040	COG0366	Alpha amylase catalytic
NQU90_11050	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NQU90_11060	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NQU90_11065	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NQU90_11070	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NQU90_11075	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
NQU90_11080	COG3313	Fe-S protein
NQU90_11085	COG2942	2-epimerase
NQU90_11090	COG3716	PTS system mannose fructose sorbose family IID component
NQU90_11095	COG3715	PTS system
NQU90_11100	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU90_11100	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_11115	COG1609	Transcriptional regulator
NQU90_11120	COG2140	Oxalate decarboxylase
NQU90_11125	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU90_11125	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU90_11125	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
NQU90_11130	COG1105	Belongs to the carbohydrate kinase PfkB family
NQU90_11135	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_11135	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_11140	COG1609	Transcriptional regulator
NQU90_11145	COG0814	amino acid
NQU90_11155	COG3788	relative of glutathione S-transferase, MAPEG superfamily
NQU90_11165	COG0513	Belongs to the DEAD box helicase family
NQU90_11175	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NQU90_11180	COG2890	protein-(glutamine-N5) methyltransferase activity
NQU90_11185	COG2840	Smr protein MutS2
NQU90_11190	COG3706	GGDEF domain
NQU90_11195	COG0406	alpha-ribazole phosphatase activity
NQU90_11205	COG5433	transposase activity
NQU90_11220	COG2824	Alkylphosphonate utilization operon protein PhnA
NQU90_11235	COG0494	nUDIX hydrolase
NQU90_11240	COG0814	amino acid
NQU90_11250	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
NQU90_11255	COG0514	ATP-dependent DNA helicase (RecQ)
NQU90_11260	COG2766	serine protein kinase
NQU90_11265	COG2718	Belongs to the UPF0229 family
NQU90_11270	COG2719	SpoVR family
NQU90_11275	COG1024	Enoyl-CoA hydratase
NQU90_11275	COG1250	3-hydroxyacyl-CoA dehydrogenase
NQU90_11280	COG0183	Belongs to the thiolase family
NQU90_11285	COG0714	Associated with various cellular activities
NQU90_11305	COG2304	oxidoreductase activity
NQU90_11315	COG1595	DNA-templated transcription, initiation
NQU90_11325	COG2067	long-chain fatty acid transport protein
NQU90_11330	COG2067	long-chain fatty acid transport protein
NQU90_11335	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
NQU90_11350	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NQU90_11360	COG1643	Atp-dependent helicase
NQU90_11365	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
NQU90_11365	COG0517	IMP dehydrogenase activity
NQU90_11365	COG0617	tRNA 3'-terminal CCA addition
NQU90_11370	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU90_11385	COG2925	Exonuclease
NQU90_11395	COG3345	alpha-galactosidase
NQU90_11400	COG1380	Effector of murein hydrolase LrgA
NQU90_11405	COG1346	cytolysis
NQU90_11410	COG0295	cytidine deaminase activity
NQU90_11415	COG3033	Beta-eliminating lyase
NQU90_11425	COG3046	protein related to deoxyribodipyrimidine photolyase
NQU90_11430	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU90_11435	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NQU90_11460	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU90_11470	COG5433	transposase activity
NQU90_11475	COG0583	DNA-binding transcription factor activity
NQU90_11480	COG0778	Nitroreductase
NQU90_11535	COG3267	Type II secretory pathway component ExeA
NQU90_11535	COG3409	Peptidoglycan-binding domain 1 protein
NQU90_11555	COG0730	response to heat
NQU90_11565	COG1028	Short-chain dehydrogenase reductase Sdr
NQU90_11575	COG1024	Enoyl-CoA hydratase
NQU90_11580	COG1024	Enoyl-CoA hydratase
NQU90_11585	COG1960	acyl-CoA dehydrogenase activity
NQU90_11590	COG1960	acyl-CoA dehydrogenase activity
NQU90_11595	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NQU90_11600	COG1024	Enoyl-CoA hydratase
NQU90_11630	COG1584	GPR1 FUN34 yaaH family protein
NQU90_11645	COG1115	amino acid carrier protein
NQU90_11650	COG1024	Enoyl-CoA hydratase
NQU90_11665	COG3162	membrane
NQU90_11670	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NQU90_11675	COG0488	(ABC) transporter
NQU90_11680	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NQU90_11685	COG0776	regulation of translation
NQU90_11690	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
NQU90_11695	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NQU90_11700	COG0740	serine-type endopeptidase activity
NQU90_11705	COG0544	peptidyl-prolyl cis-trans isomerase activity
NQU90_11715	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
NQU90_11720	COG4591	ABC-type transport system involved in lipoprotein release permease component
NQU90_11725	COG1136	(ABC) transporter
NQU90_11730	COG4591	ABC-type transport system involved in lipoprotein release permease component
NQU90_11740	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NQU90_11745	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
NQU90_11755	COG0697	spore germination
NQU90_11765	COG2062	phosphohistidine phosphatase, SixA
NQU90_11770	COG1025	Belongs to the peptidase M16 family
NQU90_11805	COG5433	transposase activity
NQU90_11810	COG5290	Psort location Cytoplasmic, score
NQU90_11820	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NQU90_11820	COG0519	Catalyzes the synthesis of GMP from XMP
NQU90_11825	COG0516	GMP reductase activity
NQU90_11825	COG0517	IMP dehydrogenase activity
NQU90_11835	COG1570	exodeoxyribonuclease VII activity
NQU90_11840	COG2188	Transcriptional regulator
NQU90_11845	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU90_11845	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU90_11845	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_11850	COG0383	alpha-mannosidase activity
NQU90_11855	COG1181	Belongs to the D-alanine--D-alanine ligase family
NQU90_11865	COG0386	Belongs to the glutathione peroxidase family
NQU90_11870	COG0513	Belongs to the DEAD box helicase family
NQU90_11885	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NQU90_11890	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NQU90_11895	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NQU90_11945	COG3300	MHYT domain
NQU90_11945	COG5001	Diguanylate cyclase
NQU90_11960	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NQU90_11970	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
NQU90_11975	COG0563	adenylate kinase activity
NQU90_11985	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NQU90_11990	COG1286	toxin biosynthetic process
NQU90_12000	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NQU90_12005	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NQU90_12010	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NQU90_12015	COG1674	ftsk spoiiie
NQU90_12015	COG0531	amino acid
NQU90_12025	COG0686	Belongs to the AlaDH PNT family
NQU90_12030	COG0492	ferredoxin-NADP+ reductase activity
NQU90_12035	COG3706	GGDEF domain
NQU90_12040	COG3134	Outer membrane lipoprotein
NQU90_12045	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
NQU90_12050	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
NQU90_12055	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NQU90_12060	COG0542	response to heat
NQU90_12065	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
NQU90_12070	COG1278	Cold shock
NQU90_12075	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NQU90_12095	COG0745	RESPONSE REGULATOR receiver
NQU90_12100	COG2205	protein histidine kinase activity
NQU90_12110	COG0392	lysyltransferase activity
NQU90_12110	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NQU90_12125	COG0659	secondary active sulfate transmembrane transporter activity
NQU90_12175	COG0582	viral genome integration into host DNA
NQU90_12225	COG0672	)-iron permease
NQU90_12250	COG2814	Major facilitator Superfamily
NQU90_12265	COG1136	(ABC) transporter
NQU90_12270	COG0577	efflux transmembrane transporter activity
NQU90_12285	COG0596	Alpha beta hydrolase
NQU90_12305	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NQU90_12310	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NQU90_12310	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NQU90_12315	COG0527	aspartate kinase activity
NQU90_12325	COG1368	sulfuric ester hydrolase activity
NQU90_12335	COG4667	esterase of the alpha-beta hydrolase superfamily
NQU90_12355	COG1648	precorrin-2 dehydrogenase activity
NQU90_12355	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NQU90_12365	COG0393	Putative heavy-metal-binding
NQU90_12370	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
NQU90_12375	COG0285	dihydrofolate synthase activity
NQU90_12380	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NQU90_12385	COG0101	tRNA pseudouridine synthase activity
NQU90_12395	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NQU90_12400	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NQU90_12405	COG0671	phosphoesterase, PA-phosphatase related
NQU90_12410	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NQU90_12415	COG2056	Na+-H+ antiporter family
NQU90_12420	COG3300	MHYT domain
NQU90_12420	COG5001	Diguanylate cyclase
NQU90_12435	COG2050	protein possibly involved in aromatic compounds catabolism
NQU90_12445	COG0247	lactate metabolic process
NQU90_12445	COG0277	FAD linked oxidase domain protein
NQU90_12455	COG1253	flavin adenine dinucleotide binding
NQU90_12460	COG1902	pentaerythritol trinitrate reductase activity
NQU90_12475	COG0647	UMP catabolic process
NQU90_12480	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NQU90_12480	COG4651	solute:proton antiporter activity
NQU90_12490	COG0367	asparagine synthase
NQU90_12495	COG3039	Transposase
NQU90_12505	COG3069	C4-dicarboxylate transmembrane transporter activity
NQU90_12510	COG2195	Cleaves the N-terminal amino acid of tripeptides
NQU90_12520	COG0625	glutathione transferase activity
NQU90_12530	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
NQU90_12545	COG0564	pseudouridine synthase activity
NQU90_12550	COG4160	amino acid transport
NQU90_12560	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU90_12570	COG2431	L-lysine efflux transmembrane transporter activity
NQU90_12575	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NQU90_12580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU90_12585	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
NQU90_12595	COG1393	Belongs to the ArsC family
NQU90_12600	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NQU90_12605	COG4783	chaperone-mediated protein folding
NQU90_12610	COG0425	Belongs to the sulfur carrier protein TusA family
NQU90_12635	COG3842	ATPase activity
NQU90_12640	COG3833	ABC-type maltose transport systems, permease component
NQU90_12645	COG1175	transmembrane transport
NQU90_12655	COG3081	Nucleoid-associated protein
NQU90_12660	COG3082	Protein of unknown function (DUF1414)
NQU90_12665	COG3083	sulfuric ester hydrolase activity
NQU90_12670	COG1464	Belongs to the NlpA lipoprotein family
NQU90_12685	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NQU90_12685	COG0574	Belongs to the PEP-utilizing enzyme family
NQU90_12690	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
NQU90_12720	COG0840	transmembrane signaling receptor activity
NQU90_12725	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NQU90_12725	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NQU90_12730	COG0509	glycine decarboxylation via glycine cleavage system
NQU90_12735	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NQU90_12740	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NQU90_12745	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NQU90_12765	COG2814	Major facilitator Superfamily
NQU90_12770	COG0625	glutathione transferase activity
NQU90_12780	COG0483	inositol monophosphate 1-phosphatase activity
NQU90_12790	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NQU90_12805	COG1086	Polysaccharide biosynthesis protein
NQU90_12810	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NQU90_12820	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
NQU90_12835	COG2089	acid synthase
NQU90_12895	COG0301	tRNA thio-modification
NQU90_12895	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NQU90_12905	COG4953	penicillin-binding protein 1C
NQU90_12910	COG2373	Large extracellular alpha-helical protein
NQU90_12920	COG0446	pyridine nucleotide-disulphide oxidoreductase
NQU90_12930	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NQU90_12940	COG1252	NADH dehydrogenase
NQU90_12945	COG3150	esterase
NQU90_12950	COG2233	PERMEase
NQU90_12960	COG2354	Protein conserved in bacteria
NQU90_12975	COG0840	transmembrane signaling receptor activity
NQU90_12980	COG1301	dicarboxylic acid transport
NQU90_12995	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NQU90_13010	COG0537	adenosine 5'-monophosphoramidase activity
NQU90_13045	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NQU90_13050	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NQU90_13060	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NQU90_13065	COG0287	Prephenate dehydrogenase
NQU90_13065	COG1605	Chorismate mutase
NQU90_13075	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NQU90_13080	COG0505	Belongs to the CarA family
NQU90_13085	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
NQU90_13100	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NQU90_13105	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NQU90_13110	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NQU90_13115	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
NQU90_13120	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NQU90_13130	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
NQU90_13160	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NQU90_13165	COG0861	Integral membrane protein TerC family
NQU90_13180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NQU90_13185	COG0601	transmembrane transport
NQU90_13195	COG2095	MarC family integral membrane protein
NQU90_13200	COG1454	alcohol dehydrogenase
NQU90_13200	COG1012	belongs to the aldehyde dehydrogenase family
NQU90_13205	COG0217	transcriptional regulatory protein
NQU90_13210	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NQU90_13220	COG1801	Protein of unknown function DUF72
NQU90_13225	COG4106	trans-aconitate 2-methyltransferase activity
NQU90_13230	COG0500	methyltransferase
NQU90_13250	COG0450	alkyl hydroperoxide reductase
NQU90_13255	COG0583	DNA-binding transcription factor activity
NQU90_13260	COG0791	NLP P60 protein
NQU90_13275	COG5433	transposase activity
NQU90_13285	COG2610	gluconate transmembrane transporter activity
NQU90_13290	COG3048	D-serine ammonia-lyase activity
NQU90_13300	COG0538	isocitrate dehydrogenase activity
NQU90_13305	COG2207	Transcriptional regulator
NQU90_13320	COG3039	Transposase
NQU90_13330	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU90_13345	COG3152	Membrane
NQU90_13380	COG1309	transcriptional regulator
NQU90_13410	COG0534	Mate efflux family protein
NQU90_13420	COG2841	Protein conserved in bacteria
NQU90_13430	COG3300	MHYT domain
NQU90_13430	COG5001	Diguanylate cyclase
NQU90_13435	COG3132	Protein of unknown function, DUF480
NQU90_13465	COG0708	Exodeoxyribonuclease III
NQU90_13500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_13505	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_13515	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NQU90_13520	COG1120	ATPase activity
NQU90_13525	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NQU90_13530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NQU90_13535	COG4771	TonB-dependent receptor
NQU90_13540	COG2375	cellular response to nickel ion
NQU90_13545	COG3437	response regulator, receiver
NQU90_13545	COG0784	Response regulator, receiver
NQU90_13555	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NQU90_13560	COG0328	RNA-DNA hybrid ribonuclease activity
NQU90_13565	COG2226	methyltransferase
NQU90_13570	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NQU90_13575	COG1388	LysM domain
NQU90_13575	COG0741	lytic transglycosylase activity
NQU90_13600	COG5002	protein histidine kinase activity
NQU90_13600	COG5000	phosphorelay sensor kinase activity
NQU90_13605	COG0745	RESPONSE REGULATOR receiver
NQU90_13610	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_13615	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_13625	COG1376	ErfK ybiS ycfS ynhG family protein
NQU90_13625	COG1388	LysM domain
NQU90_13635	COG0471	metal ion transport
NQU90_13645	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
NQU90_13650	COG0791	NLP P60 protein
NQU90_13660	COG3118	belongs to the thioredoxin family
NQU90_13670	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NQU90_13675	COG0788	formyltetrahydrofolate deformylase activity
NQU90_13685	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NQU90_13700	COG0741	lytic transglycosylase activity
NQU90_13700	COG0739	heme binding
NQU90_13700	COG1196	nuclear chromosome segregation
NQU90_13705	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NQU90_13715	COG0436	Aminotransferase
NQU90_13720	COG1288	antiporter activity
NQU90_13725	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NQU90_13740	COG2964	Protein conserved in bacteria
NQU90_13745	COG3681	Belongs to the UPF0597 family
NQU90_13755	COG0814	amino acid
NQU90_13775	COG1166	arginine decarboxylase activity
NQU90_13780	COG2195	Cleaves the N-terminal amino acid of tripeptides
NQU90_13795	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
NQU90_13805	COG2353	YceI-like domain
NQU90_13810	COG0583	DNA-binding transcription factor activity
NQU90_13820	COG2759	Belongs to the formate--tetrahydrofolate ligase family
NQU90_13825	COG0840	transmembrane signaling receptor activity
NQU90_13830	COG0302	gtp cyclohydrolase
NQU90_13835	COG0303	'Molybdopterin
NQU90_13840	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NQU90_13845	COG2267	carboxylic ester hydrolase activity
NQU90_13850	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
NQU90_13865	COG0314	molybdopterin synthase activity
NQU90_13870	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
NQU90_13875	COG0315	cyclic pyranopterin monophosphate synthase activity
NQU90_13880	COG0521	Mo-molybdopterin cofactor biosynthetic process
NQU90_13885	COG3005	denitrification pathway
NQU90_13895	COG0348	domain, Protein
NQU90_13900	COG0437	4 iron, 4 sulfur cluster binding
NQU90_13905	COG0243	molybdopterin cofactor binding
NQU90_13915	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU90_13920	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NQU90_13925	COG3850	Histidine kinase
NQU90_13930	COG2197	response regulator
NQU90_13960	COG0121	glutamine amidotransferase
NQU90_13965	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NQU90_13970	COG1960	acyl-CoA dehydrogenase activity
NQU90_13975	COG1473	amidohydrolase
NQU90_13980	COG2914	Belongs to the UPF0125 (RnfH) family
NQU90_13985	COG2867	negative regulation of translational initiation
NQU90_13990	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
NQU90_14000	COG0582	viral genome integration into host DNA
NQU90_14015	COG3311	Transcriptional regulator
NQU90_14025	COG5377	YqaJ viral recombinase family
NQU90_14070	COG2003	Belongs to the UPF0758 family
NQU90_14120	COG1715	Restriction endonuclease
NQU90_14130	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
NQU90_14210	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_14215	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_14230	COG0784	Response regulator, receiver
NQU90_14230	COG2205	protein histidine kinase activity
NQU90_14240	COG3383	formate dehydrogenase (NAD+) activity
NQU90_14255	COG3311	Transcriptional regulator
NQU90_14320	COG2003	Belongs to the UPF0758 family
NQU90_14370	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
NQU90_14375	COG0732	type I restriction modification DNA specificity domain
NQU90_14380	COG1401	restriction endodeoxyribonuclease activity
NQU90_14390	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
NQU90_14450	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_14455	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_14475	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NQU90_14485	COG1960	acyl-CoA dehydrogenase activity
NQU90_14500	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NQU90_14505	COG1317	bacterial-type flagellum organization
NQU90_14595	COG0457	Tetratricopeptide repeat
NQU90_14665	COG4790	Type iii secretion
NQU90_14670	COG4794	Type iii secretion
NQU90_14675	COG4791	protein targeting
NQU90_14680	COG4792	protein secretion
NQU90_14700	COG0789	Transcriptional regulator
NQU90_14715	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NQU90_14720	COG0083	homoserine kinase activity
NQU90_14730	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
NQU90_14735	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
NQU90_14740	COG1946	Acyl-CoA thioesterase
NQU90_14750	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NQU90_14760	COG0009	L-threonylcarbamoyladenylate synthase
NQU90_14770	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NQU90_14775	COG0512	Glutamine amidotransferase of anthranilate synthase
NQU90_14775	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NQU90_14780	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NQU90_14785	COG0134	indole-3-glycerol-phosphate synthase activity
NQU90_14785	COG0135	phosphoribosylanthranilate isomerase activity
NQU90_14790	COG0133	tryptophan synthase activity
NQU90_14795	COG0159	tryptophan synthase activity
NQU90_14805	COG3039	Transposase
NQU90_14815	COG3039	Transposase
NQU90_14820	COG1988	membrane-bound metal-dependent
NQU90_14840	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU90_14850	COG0798	PFAM Bile acid sodium symporter
NQU90_14880	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NQU90_14890	COG0745	RESPONSE REGULATOR receiver
NQU90_14905	COG4988	ABC transporter
NQU90_14910	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NQU90_14930	COG1720	tRNA m6t6A37 methyltransferase activity
NQU90_14935	COG3038	cytochrome b561
NQU90_14955	COG2862	Uncharacterized protein family, UPF0114
NQU90_14970	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU90_14975	COG1396	sequence-specific DNA binding
NQU90_14975	COG1917	Cupin 2, conserved barrel domain protein
NQU90_14990	COG0531	amino acid
NQU90_15000	COG0531	amino acid
NQU90_15010	COG1283	sodium-dependent phosphate transmembrane transporter activity
NQU90_15015	COG0545	Peptidyl-prolyl cis-trans isomerase
NQU90_15025	COG2974	May be involved in recombination
NQU90_15035	COG0420	3'-5' exonuclease activity
NQU90_15040	COG0419	ATPase involved in DNA repair
NQU90_15045	COG3384	dioxygenase
NQU90_15055	COG0469	pyruvate kinase activity
NQU90_15060	COG1196	nuclear chromosome segregation
NQU90_15060	COG3264	Mechanosensitive ion channel
NQU90_15070	COG3590	peptidase
NQU90_15080	COG2190	(PTS) system
NQU90_15090	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_15095	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NQU90_15100	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NQU90_15115	COG2770	Histidine kinase
NQU90_15115	COG3437	response regulator, receiver
NQU90_15120	COG3409	Peptidoglycan-binding domain 1 protein
NQU90_15120	COG3267	Type II secretory pathway component ExeA
NQU90_15130	COG3031	protein transport across the cell outer membrane
NQU90_15135	COG1450	Type ii and iii secretion system protein
NQU90_15140	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NQU90_15145	COG1459	type II secretion system
NQU90_15150	COG2165	general secretion pathway protein
NQU90_15160	COG2165	general secretion pathway protein
NQU90_15170	COG3156	type II secretion system protein K
NQU90_15180	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
NQU90_15195	COG0670	Belongs to the BI1 family
NQU90_15200	COG1289	transmembrane transporter activity
NQU90_15205	COG2920	part of a sulfur-relay system
NQU90_15210	COG0673	inositol 2-dehydrogenase activity
NQU90_15215	COG0583	DNA-binding transcription factor activity
NQU90_15240	COG1032	radical SAM domain protein
NQU90_15250	COG1566	PFAM secretion protein HlyD family protein
NQU90_15260	COG3706	GGDEF domain
NQU90_15265	COG1752	Esterase of the alpha-beta hydrolase superfamily
NQU90_15270	COG0531	amino acid
NQU90_15295	COG0281	malic enzyme
NQU90_15305	COG0534	Mate efflux family protein
NQU90_15320	COG2233	PERMEase
NQU90_15325	COG0095	Lipoate-protein ligase
NQU90_15330	COG1115	amino acid carrier protein
NQU90_15335	COG0019	diaminopimelate decarboxylase activity
NQU90_15345	COG0678	peroxiredoxin activity
NQU90_15370	COG0545	Peptidyl-prolyl cis-trans isomerase
NQU90_15375	COG3142	Participates in the control of copper homeostasis
NQU90_15400	COG5002	protein histidine kinase activity
NQU90_15405	COG0745	RESPONSE REGULATOR receiver
NQU90_15410	COG0346	lactoylglutathione lyase activity
NQU90_15415	COG3284	Transcriptional regulator
NQU90_15430	COG0697	spore germination
NQU90_15440	COG3290	protein histidine kinase activity
NQU90_15445	COG0281	malic enzyme
NQU90_15460	COG1846	Transcriptional regulator
NQU90_15465	COG1566	PFAM secretion protein HlyD family protein
NQU90_15500	COG0602	queuosine metabolic process
NQU90_15505	COG1328	CTP reductase activity
NQU90_15515	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NQU90_15520	COG3115	cell septum assembly
NQU90_15525	COG1196	nuclear chromosome segregation
NQU90_15535	COG2860	membrane
NQU90_15545	COG3108	Peptidase M15
NQU90_15550	COG2989	Protein conserved in bacteria
NQU90_15565	COG0463	Glycosyl transferase, family 2
NQU90_15580	COG0366	Alpha amylase catalytic
NQU90_15615	COG2199	diguanylate cyclase activity
NQU90_15615	COG2203	Gaf domain
NQU90_15625	COG3590	peptidase
NQU90_15635	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NQU90_15640	COG1982	Orn Lys Arg decarboxylase major
NQU90_15645	COG0531	amino acid
NQU90_15650	COG3710	Transcriptional regulator
NQU90_15655	COG0531	amino acid
NQU90_15675	COG0814	amino acid
NQU90_15705	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NQU90_15710	COG0739	heme binding
NQU90_15715	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
NQU90_15730	COG5433	transposase activity
NQU90_15735	COG0251	oxidation-reduction process
NQU90_15750	COG0583	DNA-binding transcription factor activity
NQU90_15755	COG1028	Short-chain dehydrogenase reductase Sdr
NQU90_15755	COG3321	synthase
NQU90_15755	COG0604	alcohol dehydrogenase
NQU90_15765	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NQU90_15775	COG3091	SprT-like family
NQU90_15785	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NQU90_15790	COG0189	ligase activity
NQU90_15795	COG1678	Uncharacterized ACR, COG1678
NQU90_15800	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NQU90_15805	COG3104	oligopeptide transport
NQU90_15820	COG0714	Associated with various cellular activities
NQU90_15835	COG1115	amino acid carrier protein
NQU90_15840	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NQU90_15850	COG0825	malonyl-CoA metabolic process
NQU90_15860	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NQU90_15865	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NQU90_15870	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NQU90_15875	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NQU90_15880	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NQU90_15895	COG0750	zinc metalloprotease
NQU90_15900	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
NQU90_15905	COG0575	Belongs to the CDS family
NQU90_15910	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NQU90_15915	COG0233	cytoplasmic translational termination
NQU90_15920	COG0528	UMP kinase activity
NQU90_15925	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NQU90_15930	COG0052	Belongs to the universal ribosomal protein uS2 family
NQU90_15935	COG0024	Methionine aminopeptidase
NQU90_15945	COG2171	N-acyltransferase activity
NQU90_15955	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU90_15955	COG1263	PTS System
NQU90_15975	COG0366	Alpha amylase catalytic
NQU90_15990	COG0564	pseudouridine synthase activity
NQU90_15995	COG3098	single-species biofilm formation
NQU90_16020	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
NQU90_16030	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NQU90_16030	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NQU90_16045	COG1611	Belongs to the LOG family
NQU90_16050	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NQU90_16055	COG0473	3-isopropylmalate dehydrogenase activity
NQU90_16065	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
NQU90_16070	COG2363	Small membrane protein
NQU90_16080	COG0583	DNA-binding transcription factor activity
NQU90_16085	COG0840	transmembrane signaling receptor activity
NQU90_16090	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NQU90_16105	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NQU90_16110	COG1666	GTP binding
NQU90_16120	COG2211	Major facilitator Superfamily
NQU90_16125	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NQU90_16135	COG2813	Specifically methylates the guanine in position
NQU90_16140	COG0271	Belongs to the BolA IbaG family
NQU90_16145	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU90_16150	COG1805	sodium ion transport
NQU90_16155	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU90_16160	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU90_16165	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU90_16170	COG2871	sodium ion transport
NQU90_16175	COG1477	protein flavinylation
NQU90_16205	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NQU90_16220	COG0300	oxidoreductase activity
NQU90_16230	COG0415	Belongs to the DNA photolyase family
NQU90_16235	COG0789	Transcriptional regulator
NQU90_16240	COG3272	Protein of unknown function (DUF1722)
NQU90_16270	COG1605	Chorismate mutase
NQU90_16270	COG0077	Prephenate dehydratase
NQU90_16290	COG5433	transposase activity
NQU90_16295	COG3039	Transposase
NQU90_16310	COG3039	Transposase
NQU90_16330	COG2801	Transposase and inactivated derivatives
NQU90_16335	COG0840	transmembrane signaling receptor activity
NQU90_16340	COG3039	Transposase
NQU90_16345	COG2197	response regulator
NQU90_16350	COG2199	diguanylate cyclase activity
NQU90_16350	COG2203	Gaf domain
NQU90_16360	COG2199	diguanylate cyclase activity
NQU90_16360	COG2203	Gaf domain
NQU90_16375	COG3039	Transposase
NQU90_16395	COG5001	Diguanylate cyclase
NQU90_16395	COG1716	ATPase activity
NQU90_16400	COG3706	GGDEF domain
NQU90_16415	COG5377	YqaJ viral recombinase family
NQU90_16460	COG2003	Belongs to the UPF0758 family
NQU90_16515	COG1715	Restriction endonuclease
NQU90_16525	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
NQU90_16535	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NQU90_16545	COG0210	DNA helicase
NQU90_16555	COG0732	type I restriction modification DNA specificity domain
NQU90_16620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_16625	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU90_16640	COG3177	Filamentation induced by cAMP protein fic
NQU90_16685	COG0300	oxidoreductase activity
NQU90_16710	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
NQU90_16755	COG0826	peptidase U32
NQU90_16760	COG1280	lysine exporter protein (LysE YggA)
NQU90_16770	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NQU90_16780	COG0745	RESPONSE REGULATOR receiver
NQU90_16790	COG0643	Histidine kinase
NQU90_16790	COG2198	Histidine kinase
NQU90_16800	COG0835	chemotaxis
NQU90_16805	COG0840	transmembrane signaling receptor activity
NQU90_16815	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
NQU90_16820	COG2201	protein-glutamate methylesterase activity
NQU90_16825	COG1185	polyribonucleotide nucleotidyltransferase activity
NQU90_16830	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NQU90_16835	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NQU90_16840	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NQU90_16845	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NQU90_16850	COG0195	Participates in both transcription termination and antitermination
NQU90_16855	COG0779	Required for maturation of 30S ribosomal subunits
NQU90_16870	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NQU90_16875	COG0149	triose-phosphate isomerase activity
NQU90_16880	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NQU90_16885	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NQU90_16895	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
NQU90_16900	COG1534	Rna-binding protein
NQU90_16915	COG1360	Flagellar Motor Protein
NQU90_16920	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NQU90_16925	COG1722	exodeoxyribonuclease VII activity
NQU90_16930	COG0142	geranyltranstransferase activity
NQU90_16935	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NQU90_16945	COG0737	Belongs to the 5'-nucleotidase family
NQU90_16950	COG5433	transposase activity
NQU90_16975	COG2204	response regulator
NQU90_16980	COG0545	Peptidyl-prolyl cis-trans isomerase
NQU90_16990	COG2900	Belongs to the SlyX family
NQU90_17000	COG0601	transmembrane transport
NQU90_17015	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NQU90_17020	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NQU90_17025	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NQU90_17030	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
NQU90_17045	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NQU90_17045	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NQU90_17050	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NQU90_17055	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NQU90_17065	COG2205	protein histidine kinase activity
NQU90_17065	COG2198	Histidine kinase
NQU90_17065	COG0784	Response regulator, receiver
NQU90_17070	COG1879	ABC-type sugar transport system periplasmic component
NQU90_17080	COG0745	RESPONSE REGULATOR receiver
NQU90_17085	COG3005	denitrification pathway
NQU90_17095	COG3381	protein complex oligomerization
NQU90_17115	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NQU90_17120	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NQU90_17125	COG0511	ligase activity, forming carbon-carbon bonds
NQU90_17130	COG0439	Biotin carboxylase
NQU90_17135	COG3924	membrane
NQU90_17140	COG4145	pantothenate transmembrane transporter activity
NQU90_17145	COG1263	PTS System
NQU90_17145	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU90_17145	COG2190	(PTS) system
NQU90_17150	COG0583	DNA-binding transcription factor activity
NQU90_17155	COG0604	alcohol dehydrogenase
NQU90_17160	COG2264	protein methyltransferase activity
NQU90_17165	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NQU90_17170	COG0110	maltose O-acetyltransferase activity
NQU90_17175	COG0778	Nitroreductase
NQU90_17180	COG0446	pyridine nucleotide-disulphide oxidoreductase
NQU90_17180	COG1902	pentaerythritol trinitrate reductase activity
NQU90_17185	COG0616	signal peptide processing
NQU90_17195	COG4174	ABC transporter (Permease)
NQU90_17200	COG4239	(ABC) transporter, permease
NQU90_17210	COG0444	Belongs to the ABC transporter superfamily
NQU90_17215	COG4608	Belongs to the ABC transporter superfamily
NQU90_17235	COG3416	Protein conserved in bacteria
NQU90_17245	COG0741	lytic transglycosylase activity
NQU90_17260	COG0488	(ABC) transporter
NQU90_17270	COG2252	PERMEase
NQU90_17275	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NQU90_17280	COG0840	transmembrane signaling receptor activity
NQU90_17290	COG1278	Cold shock
NQU90_17330	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NQU90_17340	COG0688	phosphatidylethanolamine metabolic process
NQU90_17345	COG4628	conserved protein (DUF2132)
NQU90_17360	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NQU90_17375	COG1073	alpha beta
NQU90_17380	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
NQU90_17385	COG2195	Cleaves the N-terminal amino acid of tripeptides
NQU90_17390	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
NQU90_17395	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NQU90_17400	COG3178	'Phosphotransferase
NQU90_17405	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
NQU90_17410	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NQU90_17415	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NQU90_17420	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NQU90_17425	COG2967	ApaG domain
NQU90_17430	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NQU90_17445	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NQU90_17455	COG3314	Sporulation integral membrane protein YlbJ
NQU90_17460	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NQU90_17465	COG0211	Belongs to the bacterial ribosomal protein bL27 family
NQU90_17470	COG0261	This protein binds to 23S rRNA in the presence of protein L20
NQU90_17475	COG0142	geranyltranstransferase activity
NQU90_17480	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
NQU90_17485	COG0330	HflC and HflK could
NQU90_17490	COG0330	HflC and HflK could
NQU90_17495	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NQU90_17500	COG1923	regulation of RNA biosynthetic process
NQU90_17505	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NQU90_17510	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NQU90_17515	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NQU90_17525	COG0802	atpase or kinase
NQU90_17530	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NQU90_17530	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NQU90_17550	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NQU90_17555	COG2011	ABC-type metal ion transport system permease component
NQU90_17560	COG1464	Belongs to the NlpA lipoprotein family
NQU90_17595	COG0784	Response regulator, receiver
NQU90_17595	COG2198	Histidine kinase
NQU90_17595	COG5002	protein histidine kinase activity
NQU90_17630	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
NQU90_17635	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
NQU90_17640	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NQU90_17645	COG2716	regulation of RNA biosynthetic process
NQU90_17650	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NQU90_17655	COG3013	Belongs to the UPF0304 family
NQU90_17665	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NQU90_17670	COG0280	phosphate acetyltransferase
NQU90_17670	COG0857	belongs to the CobB CobQ family
NQU90_17675	COG1555	photosystem II stabilization
NQU90_17680	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NQU90_17685	COG3104	oligopeptide transport
NQU90_17690	COG0745	RESPONSE REGULATOR receiver
NQU90_17720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU90_17735	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NQU90_17745	COG2189	Belongs to the N(4) N(6)-methyltransferase family
NQU90_17760	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NQU90_17810	COG2003	Belongs to the UPF0758 family
NQU90_17920	COG0440	acetolactate synthase activity
NQU90_17925	COG0028	Belongs to the TPP enzyme family
NQU90_17940	COG0671	phosphoesterase, PA-phosphatase related
NQU90_17950	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NQU90_17955	COG0473	3-isopropylmalate dehydrogenase activity
NQU90_17960	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NQU90_17965	COG0066	3-isopropylmalate dehydratase activity
NQU90_17980	COG4143	(ABC) transporter
NQU90_17985	COG1178	ABC-type Fe3 transport system permease component
NQU90_17990	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
NQU90_17995	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NQU90_18060	COG0459	protein refolding
NQU90_18065	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NQU90_18070	COG0534	Mate efflux family protein
NQU90_18075	COG3030	protein affecting phage T7 exclusion by the F plasmid
NQU90_18080	COG1027	Aspartate ammonia-lyase
NQU90_18085	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
NQU90_18090	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NQU90_18095	COG0828	Belongs to the bacterial ribosomal protein bS21 family
NQU90_18100	COG1610	YqeY-like protein
NQU90_18105	COG0358	DNA primase activity
NQU90_18110	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NQU90_18130	COG0151	Belongs to the GarS family
NQU90_18135	COG0138	bifunctional purine biosynthesis protein purh
NQU90_18150	COG3036	rescue of stalled ribosome
NQU90_18155	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NQU90_18160	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NQU90_18170	COG0673	inositol 2-dehydrogenase activity
NQU90_18180	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NQU90_18185	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NQU90_18195	COG0583	DNA-binding transcription factor activity
NQU90_18200	COG0477	Major facilitator Superfamily
NQU90_18220	COG1028	Short-chain dehydrogenase reductase Sdr
NQU90_18230	COG2425	protein containing a von Willebrand factor type A (vWA) domain
NQU90_18255	COG1022	Amp-dependent synthetase and ligase
NQU90_18260	COG2918	glutathione biosynthetic process
NQU90_18265	COG0612	Peptidase, M16
NQU90_18270	COG1238	metal cluster binding
NQU90_18275	COG1064	alcohol dehydrogenase
NQU90_18300	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NQU90_18305	COG0359	binds to the 23S rRNA
NQU90_18310	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NQU90_18315	COG0360	Binds together with S18 to 16S ribosomal RNA
NQU90_18320	COG1914	H( )-stimulated, divalent metal cation uptake system
NQU90_18325	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NQU90_18335	COG0776	regulation of translation
NQU90_18350	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NQU90_18365	COG0560	Phosphoserine phosphatase
NQU90_18375	COG0813	purine-nucleoside phosphorylase activity
NQU90_18380	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
NQU90_18385	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
NQU90_18390	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NQU90_18400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU90_18405	COG0084	hydrolase, TatD family'
NQU90_18410	COG2165	general secretion pathway protein
NQU90_18415	COG1854	S-ribosylhomocysteine lyase activity
NQU90_18430	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
NQU90_18430	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NQU90_18475	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NQU90_18480	COG1047	Peptidyl-prolyl cis-trans
NQU90_18485	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NQU90_18490	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NQU90_18495	COG0196	riboflavin kinase activity
NQU90_18500	COG0728	peptidoglycan biosynthetic process
NQU90_18505	COG0268	Binds directly to 16S ribosomal RNA
NQU90_18510	COG0640	Transcriptional regulator
NQU90_18515	COG0583	DNA-binding transcription factor activity
NQU90_18525	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NQU90_18530	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NQU90_18535	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NQU90_18545	COG1051	belongs to the nudix hydrolase family
NQU90_18550	COG3066	DNA modification
NQU90_18560	COG0335	large ribosomal subunit rRNA binding
NQU90_18565	COG0336	Belongs to the RNA methyltransferase TrmD family
NQU90_18570	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NQU90_18575	COG0228	four-way junction DNA binding
NQU90_18580	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NQU90_18585	COG4137	Cytochrome C assembly protein
NQU90_18590	COG4536	flavin adenine dinucleotide binding
NQU90_18600	COG1017	nitric oxide dioxygenase activity
NQU90_18600	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NQU90_18605	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
NQU90_18610	COG0039	L-malate dehydrogenase activity
NQU90_18615	COG4160	amino acid transport
NQU90_18620	COG4215	(ABC) transporter
NQU90_18625	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU90_18630	COG1126	abc transporter atp-binding protein
NQU90_18635	COG1438	arginine binding
NQU90_18640	COG2837	iron assimilation
NQU90_18645	COG3842	ATPase activity
NQU90_18655	COG1840	ABC-type Fe3 transport system, periplasmic component
NQU90_18660	COG0347	Belongs to the P(II) protein family
NQU90_18680	COG3022	response to hydroperoxide
NQU90_18695	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NQU90_18700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NQU90_18705	COG0762	integral membrane protein
NQU90_18710	COG1872	DUF167
NQU90_18720	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU90_18725	COG0583	DNA-binding transcription factor activity
NQU90_18740	COG1929	Belongs to the glycerate kinase type-1 family
NQU90_18745	COG2610	gluconate transmembrane transporter activity
NQU90_18750	COG3835	regulator
NQU90_18755	COG3112	Uncharacterised protein family (UPF0231)
NQU90_18775	COG3568	Endonuclease Exonuclease Phosphatase
NQU90_18785	COG0513	Belongs to the DEAD box helicase family
NQU90_18820	COG1448	Aminotransferase
NQU90_18835	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NQU90_18840	COG1328	CTP reductase activity
NQU90_18870	COG1215	transferase activity, transferring glycosyl groups
NQU90_18875	COG0726	polysaccharide deacetylase
NQU90_18875	COG1649	PFAM Uncharacterised BCR, COG1649
NQU90_18890	COG0840	transmembrane signaling receptor activity
NQU90_18895	COG3397	chitin binding
NQU90_18900	COG0583	DNA-binding transcription factor activity
NQU90_18905	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NQU90_18910	COG4208	sulfate ABC transporter
NQU90_18915	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NQU90_18925	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NQU90_18930	COG3174	membrane
NQU90_18935	COG0110	maltose O-acetyltransferase activity
NQU90_18950	COG1011	Hydrolase
NQU90_18955	COG0494	nUDIX hydrolase
NQU90_18960	COG1218	3'(2'),5'-bisphosphate nucleotidase
NQU90_18965	COG0814	amino acid
NQU90_18970	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU90_18985	COG0626	cystathionine gamma-synthase activity
NQU90_18990	COG0460	homoserine dehydrogenase
NQU90_18990	COG0527	aspartate kinase activity
NQU90_18995	COG0306	phosphate transporter
NQU90_19000	COG1392	Phosphate transport regulator
NQU90_19010	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NQU90_19015	COG2813	Specifically methylates the guanine in position
NQU90_19020	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NQU90_19025	COG0297	glycogen (starch) synthase activity
NQU90_19065	COG1757	Na H antiporter
NQU90_19070	COG0316	Belongs to the HesB IscA family
NQU90_19080	COG0038	chloride channel
NQU90_19085	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NQU90_19100	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NQU90_19100	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NQU90_19130	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NQU90_19135	COG0564	pseudouridine synthase activity
NQU90_19145	COG0110	maltose O-acetyltransferase activity
NQU90_19150	COG0366	Alpha amylase catalytic
NQU90_19155	COG1263	PTS System
NQU90_19155	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU90_19175	COG0252	asparaginase activity
NQU90_19185	COG1253	flavin adenine dinucleotide binding
NQU90_19190	COG0586	Pfam SNARE associated Golgi protein
NQU90_19195	COG1686	Belongs to the peptidase S11 family
NQU90_19230	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
NQU90_19235	COG0527	aspartate kinase activity
NQU90_19240	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NQU90_19250	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NQU90_19255	COG1546	Belongs to the CinA family
NQU90_19260	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NQU90_19265	COG4667	esterase of the alpha-beta hydrolase superfamily
NQU90_19275	COG1346	cytolysis
NQU90_19280	COG1380	Effector of murein hydrolase LrgA
NQU90_19285	COG0583	DNA-binding transcription factor activity
NQU90_19295	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NQU90_19320	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
NQU90_19325	COG2022	thiamine diphosphate biosynthetic process
NQU90_19335	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NQU90_19340	COG0352	thiamine-phosphate diphosphorylase activity
NQU90_19345	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NQU90_19355	COG5433	transposase activity
NQU90_19375	COG0745	RESPONSE REGULATOR receiver
NQU90_19385	COG0189	ligase activity
NQU90_19430	COG0477	Major facilitator Superfamily
NQU90_19445	COG0312	modulator of DNA gyrase
NQU90_19450	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NQU90_19465	COG3164	Protein of unknown function
NQU90_19470	COG1530	ribonuclease E activity
NQU90_19475	COG0424	maF-like protein
NQU90_19480	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
NQU90_19485	COG1792	Involved in formation and maintenance of cell shape
NQU90_19490	COG1077	Cell shape determining protein MreB Mrl
NQU90_19515	COG4968	Prepilin-type N-terminal cleavage methylation domain
NQU90_19535	COG1459	type II secretion system
NQU90_19540	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NQU90_19585	COG2199	diguanylate cyclase activity
NQU90_19585	COG2200	EAL domain
NQU90_19590	COG2200	EAL domain
NQU90_19595	COG0387	Pfam Sodium calcium exchanger
NQU90_19600	COG2986	histidine ammonia-lyase
NQU90_19605	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NQU90_19610	COG0010	Belongs to the arginase family
NQU90_19615	COG1228	amidohydrolase
NQU90_19620	COG2188	Transcriptional regulator
NQU90_19625	COG0288	reversible hydration of carbon dioxide
NQU90_19635	COG2177	Part of the ABC transporter FtsEX involved in
NQU90_19640	COG2884	Cell division ATP-binding protein ftsE
NQU90_19645	COG0552	protein localization to endoplasmic reticulum
NQU90_19650	COG0742	ribosomal rna small subunit methyltransferase
NQU90_19675	COG2249	NAD(P)H dehydrogenase (quinone) activity
NQU90_19680	COG0583	DNA-binding transcription factor activity
NQU90_19685	COG4221	oxidoreductase activity
NQU90_19700	COG1770	oligopeptidase
NQU90_19715	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NQU90_19725	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
NQU90_19735	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NQU90_19745	COG2095	MarC family integral membrane protein
NQU90_19755	COG1301	dicarboxylic acid transport
NQU90_19780	COG3714	YhhN family
NQU90_19835	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NQU90_19840	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NQU90_19845	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NQU90_19850	COG0049	tRNA binding
NQU90_19855	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NQU90_19860	COG2168	tRNA wobble position uridine thiolation
NQU90_19865	COG2923	Belongs to the DsrF TusC family
NQU90_19870	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
NQU90_19880	COG2964	Protein conserved in bacteria
NQU90_19885	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NQU90_19890	COG0085	RNA polymerase activity
NQU90_19895	COG0222	ribosome binding
NQU90_19900	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NQU90_19905	COG0081	regulation of translation
NQU90_19910	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NQU90_19915	COG0250	Participates in transcription elongation, termination and antitermination
NQU90_19930	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NQU90_19955	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NQU90_19960	COG0569	domain protein
NQU90_19965	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NQU90_19995	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU90_19995	COG4191	Histidine kinase
NQU90_20000	COG3005	denitrification pathway
NQU90_20005	COG0243	molybdopterin cofactor binding
NQU90_20040	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NQU90_20050	COG2204	response regulator
NQU90_20060	COG2205	protein histidine kinase activity
NQU90_20075	COG1028	Short-chain dehydrogenase reductase Sdr
NQU90_20080	COG0516	GMP reductase activity
NQU90_20080	COG0517	IMP dehydrogenase activity
NQU90_20085	COG5413	integral membrane protein
NQU90_20095	COG1522	sequence-specific DNA binding
NQU90_20100	COG2502	aspartate--ammonia ligase
NQU90_20105	COG0542	response to heat
NQU90_20115	COG0564	pseudouridine synthase activity
NQU90_20120	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NQU90_20125	COG0446	pyridine nucleotide-disulphide oxidoreductase
NQU90_20135	COG3681	Belongs to the UPF0597 family
NQU90_20140	COG2964	Protein conserved in bacteria
NQU90_20150	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
NQU90_20155	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
NQU90_20160	COG1979	alcohol dehydrogenase
NQU90_20165	COG2207	Transcriptional regulator
NQU90_20185	COG0583	DNA-binding transcription factor activity
NQU90_20205	COG0540	Belongs to the ATCase OTCase family
NQU90_20210	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
NQU90_20215	COG1438	arginine binding
NQU90_20220	COG1288	antiporter activity
NQU90_20225	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NQU90_20255	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NQU90_20265	COG3078	GTPase activator activity
NQU90_20275	COG0218	Necessary for normal cell division and for the maintenance of normal septation
NQU90_20285	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NQU90_20290	COG0408	coproporphyrinogen oxidase activity
NQU90_20295	COG0009	L-threonylcarbamoyladenylate synthase
NQU90_20305	COG0551	DNA topoisomerase type I activity
NQU90_20310	COG2922	Belongs to the Smg family
NQU90_20315	COG0758	DNA mediated transformation
NQU90_20320	COG1652	LysM domain
NQU90_20325	COG0242	peptide deformylase activity
NQU90_20330	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NQU90_20335	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NQU90_20335	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NQU90_20340	COG0569	domain protein
NQU90_20345	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NQU90_20350	COG1217	gtp-binding protein TYPA
NQU90_20355	COG0174	glutamine synthetase
NQU90_20375	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NQU90_20380	COG1322	Protein conserved in bacteria
NQU90_20400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NQU90_20405	COG0583	DNA-binding transcription factor activity
NQU90_20410	COG0519	Catalyzes the synthesis of GMP from XMP
NQU90_20410	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NQU90_20420	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NQU90_20425	COG1396	sequence-specific DNA binding
NQU90_20430	COG1012	belongs to the aldehyde dehydrogenase family
NQU90_20440	COG2962	Rard protein
NQU90_20445	COG0840	transmembrane signaling receptor activity
NQU90_20450	COG2391	methyltransferase activity
NQU90_20465	COG0129	dihydroxy-acid dehydratase activity
NQU90_20475	COG3978	acetolactate synthase activity
NQU90_20485	COG0606	chelatase, subunit chli
NQU90_20490	COG0204	Acyl-transferase
NQU90_20495	COG0204	Acyl-transferase
NQU90_20500	COG1683	Conserved Protein
NQU90_20510	COG1335	isochorismatase
NQU90_20520	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NQU90_20525	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NQU90_20535	COG3084	Protein conserved in bacteria
NQU90_20540	COG5001	Diguanylate cyclase
NQU90_20540	COG4251	negative regulation of phosphorylation
NQU90_20540	COG3706	GGDEF domain
NQU90_20540	COG2203	Gaf domain
NQU90_20555	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NQU90_20560	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NQU90_20565	COG1561	YicC-like family, N-terminal region
NQU90_20570	COG0583	DNA-binding transcription factor activity
NQU90_20590	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NQU90_20595	COG0385	Bile acid
NQU90_20600	COG0531	amino acid
NQU90_20605	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU90_20610	COG0531	amino acid
NQU90_20615	COG2731	YhcH YjgK YiaL family protein
NQU90_20620	COG3250	beta-galactosidase activity
NQU90_20625	COG1609	Transcriptional regulator
NQU90_20665	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NQU90_20670	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NQU90_20670	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NQU90_20675	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
NQU90_20680	COG3074	FtsZ-dependent cytokinesis
NQU90_20690	COG1045	serine acetyltransferase
NQU90_20700	COG0745	RESPONSE REGULATOR receiver
NQU90_20705	COG2205	protein histidine kinase activity
NQU90_20710	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NQU90_20715	COG0534	Mate efflux family protein
NQU90_20730	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NQU90_20735	COG2937	Belongs to the GPAT DAPAT family
NQU90_20740	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
NQU90_20745	COG3161	chorismate lyase activity
NQU90_20770	COG0604	alcohol dehydrogenase
NQU90_20775	COG1609	Transcriptional regulator
NQU90_20780	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU90_20795	COG1519	Transferase
NQU90_20800	COG0859	PFAM glycosyl transferase family 9
NQU90_20805	COG0463	Glycosyl transferase, family 2
NQU90_20810	COG0859	PFAM glycosyl transferase family 9
NQU90_20815	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NQU90_20820	COG2990	Protein conserved in bacteria
NQU90_20825	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NQU90_20835	COG0267	Belongs to the bacterial ribosomal protein bL33 family
NQU90_20840	COG0227	Belongs to the bacterial ribosomal protein bL28 family
NQU90_20845	COG2003	Belongs to the UPF0758 family
NQU90_20850	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NQU90_20855	COG0756	dUTP diphosphatase activity
NQU90_20860	COG1309	transcriptional regulator
NQU90_20865	COG0668	transmembrane transport
NQU90_20870	COG0166	Belongs to the GPI family
NQU90_20875	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NQU90_20895	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NQU90_20895	COG0045	succinate-CoA ligase (ADP-forming) activity
NQU90_20895	COG1042	CoA-binding domain protein
NQU90_20930	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
NQU90_20935	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NQU90_20940	COG1739	Uncharacterized protein family UPF0029
NQU90_20945	COG0006	proline dipeptidase activity
NQU90_20950	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NQU90_20955	COG1024	Enoyl-CoA hydratase
NQU90_20955	COG1250	3-hydroxyacyl-CoA dehydrogenase
NQU90_20960	COG0183	Belongs to the thiolase family
NQU90_20985	COG0425	Belongs to the sulfur carrier protein TusA family
NQU90_20990	COG0251	oxidation-reduction process
NQU90_20995	COG2885	chlorophyll binding
NQU90_21000	COG2818	Glycosylase
NQU90_21005	COG0752	glycyl-tRNA synthetase alpha subunit
NQU90_21010	COG0751	glycine-tRNA ligase activity
NQU90_21020	COG2199	diguanylate cyclase activity
NQU90_21020	COG2200	EAL domain
NQU90_21020	COG2202	Pas domain
NQU90_21050	COG1609	Transcriptional regulator
NQU90_21055	COG0683	leucine binding
NQU90_21080	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NQU90_21090	COG2960	long-chain fatty acid transporting porin activity
NQU90_21095	COG5001	Diguanylate cyclase
NQU90_21110	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
NQU90_21125	COG3118	belongs to the thioredoxin family
NQU90_21130	COG0513	Belongs to the DEAD box helicase family
NQU90_21135	COG0248	Ppx GppA phosphatase
NQU90_21145	COG0742	ribosomal rna small subunit methyltransferase
NQU90_21185	COG0084	hydrolase, TatD family'
NQU90_21190	COG0805	protein transport
NQU90_21195	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NQU90_21200	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NQU90_21205	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NQU90_21210	COG3165	ubiquinone biosynthetic process from chorismate
NQU90_21215	COG2226	methyltransferase
NQU90_21220	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NQU90_21225	COG0402	S-adenosylhomocysteine deaminase activity
NQU90_21230	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NQU90_21265	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NQU90_21270	COG0848	biopolymer transport protein
NQU90_21275	COG0811	peptide transport
NQU90_21280	COG0811	peptide transport
NQU90_21290	COG2771	luxR family
NQU90_21295	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NQU90_21300	COG1349	DNA-binding transcription factor activity
NQU90_21305	COG0745	RESPONSE REGULATOR receiver
NQU90_21310	COG2205	protein histidine kinase activity
NQU90_21325	COG4452	Inner membrane protein CreD
NQU90_21340	COG0438	transferase activity, transferring glycosyl groups
NQU90_21340	COG0297	glycogen (starch) synthase activity
NQU90_21385	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NQU90_21390	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NQU90_21395	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NQU90_21400	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NQU90_21405	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NQU90_21410	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NQU90_21415	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NQU90_21420	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NQU90_21430	COG0356	it plays a direct role in the translocation of protons across the membrane
NQU90_21440	COG1475	DNA binding
NQU90_21445	COG1192	Involved in chromosome partitioning
NQU90_21450	COG0357	Ribosomal RNA small subunit methyltransferase G
NQU90_21455	COG0445	tRNA wobble uridine modification
NQU90_21460	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NQU90_21470	COG4615	Cyclic peptide transporter
NQU90_21475	COG1120	ATPase activity
NQU90_21480	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NQU90_21490	COG3550	peptidyl-serine autophosphorylation
NQU90_21560	COG3173	Aminoglycoside phosphotransferase
NQU90_21575	COG5001	Diguanylate cyclase
NQU90_21575	COG3300	MHYT domain
NQU90_21735	COG4974	Belongs to the 'phage' integrase family
NQU90_21740	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NQU90_21745	COG0706	membrane insertase activity
NQU90_21750	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
NQU90_21755	COG0594	ribonuclease P activity
NQU90_21760	COG0230	Belongs to the bacterial ribosomal protein bL34 family
NQU90_21765	COG1126	abc transporter atp-binding protein