locus-tag class description LOS88_00005 IPR003593 AAA+ ATPase domain LOS88_00005 IPR001957 Chromosomal replication control, initiator DnaA LOS88_00005 IPR020591 Chromosomal replication control, initiator DnaA-like LOS88_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site LOS88_00005 IPR013317 Chromosomal replication initiator protein DnaA LOS88_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal LOS88_00005 IPR024633 DnaA N-terminal domain LOS88_00005 IPR038454 DnaA, N-terminal domain superfamily LOS88_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00005 IPR010921 Trp repressor/replication initiator LOS88_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal LOS88_00010 IPR022637 DNA polymerase III, beta sliding clamp, central LOS88_00010 IPR001001 DNA polymerase III, beta sliding clamp LOS88_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal LOS88_00015 IPR001238 DNA-binding, RecF LOS88_00015 IPR018078 DNA-binding, RecF, conserved site LOS88_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00015 IPR003395 RecF/RecN/SMC, N-terminal LOS88_00015 IPR042174 DNA-binding RecF, domain 2 LOS88_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LOS88_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain LOS88_00020 IPR006171 TOPRIM domain LOS88_00020 IPR018522 DNA topoisomerase, type IIA, conserved site LOS88_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 LOS88_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal LOS88_00020 IPR001241 DNA topoisomerase, type IIA LOS88_00020 IPR011557 DNA gyrase, subunit B LOS88_00020 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_00020 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_00020 IPR041423 DNA gyrase subunit B insert domain LOS88_00020 IPR002288 DNA gyrase B subunit, C-terminal LOS88_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_00035 IPR029062 Class I glutamine amidotransferase-like LOS88_00035 IPR002818 DJ-1/PfpI LOS88_00035 IPR009057 Homeobox-like domain superfamily LOS88_00035 IPR018060 DNA binding HTH domain, AraC-type LOS88_00035 IPR018062 HTH domain AraC-type, conserved site LOS88_00040 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LOS88_00040 IPR001279 Metallo-beta-lactamase LOS88_00045 IPR023728 Small heat shock protein IbpA LOS88_00045 IPR008978 HSP20-like chaperone LOS88_00045 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain LOS88_00045 IPR002068 Alpha crystallin/Hsp20 domain LOS88_00050 IPR002068 Alpha crystallin/Hsp20 domain LOS88_00050 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain LOS88_00050 IPR008978 HSP20-like chaperone LOS88_00050 IPR023728 Small heat shock protein IbpA LOS88_00055 IPR004839 Aminotransferase, class I/classII LOS88_00055 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_00055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_00070 IPR005829 Sugar transporter, conserved site LOS88_00070 IPR020846 Major facilitator superfamily domain LOS88_00070 IPR036259 MFS transporter superfamily LOS88_00070 IPR011701 Major facilitator superfamily LOS88_00070 IPR004812 Drug resistance transporter Bcr/CmlA subfamily LOS88_00075 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_00075 IPR011006 CheY-like superfamily LOS88_00075 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_00075 IPR001789 Signal transduction response regulator, receiver domain LOS88_00075 IPR039420 Transcriptional regulatory protein WalR-like LOS88_00080 IPR025201 Sensor protein KdpD, transmembrane domain LOS88_00080 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_00080 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal LOS88_00080 IPR038318 KdpD, transmembrane domain superfamily LOS88_00080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_00080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_00080 IPR003018 GAF domain LOS88_00080 IPR005467 Histidine kinase domain LOS88_00080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_00080 IPR029016 GAF-like domain superfamily LOS88_00080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_00085 IPR003820 Potassium-transporting ATPase C chain LOS88_00090 IPR001757 P-type ATPase LOS88_00090 IPR023299 P-type ATPase, cytoplasmic domain N LOS88_00090 IPR018303 P-type ATPase, phosphorylation site LOS88_00090 IPR023298 P-type ATPase, transmembrane domain superfamily LOS88_00090 IPR008250 P-type ATPase, A domain superfamily LOS88_00090 IPR036412 HAD-like superfamily LOS88_00090 IPR023214 HAD superfamily LOS88_00090 IPR006391 P-type ATPase, B chain, subfamily IA LOS88_00095 IPR004623 Potassium-transporting ATPase A chain LOS88_00100 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOS88_00100 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LOS88_00100 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LOS88_00100 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_00100 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LOS88_00100 IPR023753 FAD/NAD(P)-binding domain LOS88_00100 IPR006322 Glutathione reductase, eukaryote/bacterial LOS88_00105 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_00105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_00105 IPR005467 Histidine kinase domain LOS88_00105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_00105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_00105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_00105 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_00110 IPR001036 Acriflavin resistance protein LOS88_00110 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_00115 IPR006143 RND efflux pump, membrane fusion protein LOS88_00115 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_00120 IPR001647 DNA-binding HTH domain, TetR-type LOS88_00120 IPR009057 Homeobox-like domain superfamily LOS88_00120 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LOS88_00150 IPR036412 HAD-like superfamily LOS88_00150 IPR023214 HAD superfamily LOS88_00150 IPR000150 Cof family LOS88_00150 IPR006379 HAD-superfamily hydrolase, subfamily IIB LOS88_00155 IPR022742 Serine aminopeptidase, S33 LOS88_00155 IPR029058 Alpha/Beta hydrolase fold LOS88_00160 IPR018357 Hexapeptide transferase, conserved site LOS88_00160 IPR001451 Hexapeptide repeat LOS88_00160 IPR011004 Trimeric LpxA-like superfamily LOS88_00165 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal LOS88_00165 IPR001537 tRNA/rRNA methyltransferase, SpoU type LOS88_00165 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase LOS88_00165 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LOS88_00165 IPR029028 Alpha/beta knot methyltransferases LOS88_00170 IPR004811 RelA/SpoT family LOS88_00170 IPR033655 RelA, TGS domain LOS88_00170 IPR012676 TGS-like LOS88_00170 IPR004095 TGS LOS88_00170 IPR007685 RelA/SpoT LOS88_00170 IPR003607 HD/PDEase domain LOS88_00170 IPR012675 Beta-grasp domain superfamily LOS88_00170 IPR002912 ACT domain LOS88_00175 IPR036161 RPB6/omega subunit-like superfamily LOS88_00175 IPR006110 RNA polymerase, subunit omega/K/RPB6 LOS88_00175 IPR003716 DNA-directed RNA polymerase, omega subunit LOS88_00175 IPR012293 RNA polymerase subunit, RPB6/omega LOS88_00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00180 IPR020590 Guanylate kinase, conserved site LOS88_00180 IPR017665 Guanylate kinase LOS88_00180 IPR008144 Guanylate kinase-like domain LOS88_00180 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LOS88_00185 IPR002201 Glycosyl transferase, family 9 LOS88_00190 IPR011009 Protein kinase-like domain superfamily LOS88_00190 IPR022826 3-deoxy-D-manno-octulosonic acid kinase LOS88_00190 IPR000719 Protein kinase domain LOS88_00200 IPR000620 EamA domain LOS88_00200 IPR004779 Carboxylate/Amino Acid/Amine Transporter LOS88_00220 IPR036390 Winged helix DNA-binding domain superfamily LOS88_00220 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_00220 IPR000847 Transcription regulator HTH, LysR LOS88_00220 IPR037416 Nodulation protein D, PBP2 LOS88_00220 IPR005119 LysR, substrate-binding LOS88_00225 IPR002305 Aminoacyl-tRNA synthetase, class Ic LOS88_00225 IPR024109 Tryptophan-tRNA ligase, bacterial-type LOS88_00225 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_00225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_00225 IPR002306 Tryptophan-tRNA ligase LOS88_00230 IPR006015 Universal stress protein A family LOS88_00230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_00230 IPR006016 UspA LOS88_00235 IPR024906 Enoyl reductase FAD binding domain LOS88_00235 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative LOS88_00235 IPR036291 NAD(P)-binding domain superfamily LOS88_00235 IPR010758 Trans-2-enoyl-CoA reductase LOS88_00240 IPR041719 Ferritin, prokaryotic-type LOS88_00240 IPR008331 Ferritin/DPS protein domain LOS88_00240 IPR001519 Ferritin LOS88_00240 IPR009078 Ferritin-like superfamily LOS88_00240 IPR012347 Ferritin-like LOS88_00240 IPR009040 Ferritin-like diiron domain LOS88_00245 IPR023166 HI0933-like insert domain superfamily LOS88_00245 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_00245 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like LOS88_00250 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LOS88_00250 IPR010559 Signal transduction histidine kinase, internal region LOS88_00250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_00250 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_00250 IPR029016 GAF-like domain superfamily LOS88_00255 IPR007492 LytTR DNA-binding domain LOS88_00255 IPR001789 Signal transduction response regulator, receiver domain LOS88_00255 IPR011006 CheY-like superfamily LOS88_00260 IPR011701 Major facilitator superfamily LOS88_00260 IPR004741 Oxalate/formate antiporter family transporter LOS88_00260 IPR020846 Major facilitator superfamily domain LOS88_00260 IPR036259 MFS transporter superfamily LOS88_00265 IPR011761 ATP-grasp fold LOS88_00265 IPR016185 Pre-ATP-grasp domain superfamily LOS88_00265 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit LOS88_00265 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain LOS88_00265 IPR011054 Rudiment single hybrid motif LOS88_00265 IPR013815 ATP-grasp fold, subdomain 1 LOS88_00265 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LOS88_00270 IPR033747 Class I PurE LOS88_00270 IPR000031 PurE domain LOS88_00270 IPR024694 PurE, prokaryotic type LOS88_00270 IPR035893 PurE domain superfamily LOS88_00285 IPR005119 LysR, substrate-binding LOS88_00285 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_00285 IPR036390 Winged helix DNA-binding domain superfamily LOS88_00285 IPR000847 Transcription regulator HTH, LysR LOS88_00290 IPR010101 TonB-dependent vitamin B12 transporter BtuB LOS88_00290 IPR039426 Vitamin B12 transporter BtuB-like LOS88_00290 IPR012910 TonB-dependent receptor, plug domain LOS88_00290 IPR037066 TonB-dependent receptor, plug domain superfamily LOS88_00290 IPR000531 TonB-dependent receptor-like, beta-barrel LOS88_00290 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LOS88_00290 IPR010917 TonB-dependent receptor, conserved site LOS88_00290 IPR010916 TonB box, conserved site LOS88_00295 IPR015942 Asp/Glu/hydantoin racemase LOS88_00295 IPR001920 Asp/Glu racemase LOS88_00295 IPR018187 Asp/Glu racemase, active site 1 LOS88_00295 IPR004391 Glutamate racemase LOS88_00295 IPR033134 Asp/Glu racemase, active site 2 LOS88_00325 IPR035985 Ubiquitin-activating enzyme LOS88_00325 IPR000594 THIF-type NAD/FAD binding fold LOS88_00330 IPR003808 Fe-S metabolism associated domain, SufE-like LOS88_00330 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE LOS88_00335 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA LOS88_00335 IPR010970 Cysteine desulfurase, SufS LOS88_00335 IPR016454 Cysteine desulfurase LOS88_00335 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_00335 IPR000192 Aminotransferase class V domain LOS88_00335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_00335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_00340 IPR013986 DExx box DNA helicase domain superfamily LOS88_00340 IPR000212 DNA helicase, UvrD/REP type LOS88_00340 IPR005752 ATP-dependent DNA helicase Rep LOS88_00340 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00340 IPR014016 UvrD-like helicase, ATP-binding domain LOS88_00340 IPR034739 UvrD/AddA helicase, N-terminal LOS88_00340 IPR014017 UvrD-like DNA helicase, C-terminal LOS88_00345 IPR029787 Nucleotide cyclase LOS88_00345 IPR000160 GGDEF domain LOS88_00345 IPR035919 EAL domain superfamily LOS88_00345 IPR001633 EAL domain LOS88_00345 IPR005330 MHYT domain LOS88_00350 IPR009056 Cytochrome c-like domain LOS88_00350 IPR036909 Cytochrome c-like domain superfamily LOS88_00350 IPR002323 Cytochrome c, class IE LOS88_00355 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LOS88_00355 IPR013154 Alcohol dehydrogenase, N-terminal LOS88_00355 IPR011032 GroES-like superfamily LOS88_00355 IPR004627 L-threonine 3-dehydrogenase LOS88_00355 IPR036291 NAD(P)-binding domain superfamily LOS88_00355 IPR020843 Polyketide synthase, enoylreductase domain LOS88_00355 IPR013149 Alcohol dehydrogenase, C-terminal LOS88_00360 IPR004839 Aminotransferase, class I/classII LOS88_00360 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase LOS88_00360 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LOS88_00360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_00360 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_00360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_00365 IPR013571 Transcription regulator QacR, C-terminal LOS88_00365 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LOS88_00365 IPR001647 DNA-binding HTH domain, TetR-type LOS88_00365 IPR009057 Homeobox-like domain superfamily LOS88_00365 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LOS88_00370 IPR036291 NAD(P)-binding domain superfamily LOS88_00370 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase LOS88_00370 IPR001509 NAD-dependent epimerase/dehydratase LOS88_00385 IPR001173 Glycosyltransferase 2-like LOS88_00385 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_00390 IPR001584 Integrase, catalytic core LOS88_00390 IPR001598 Transposase, IS30, conserved site LOS88_00390 IPR009057 Homeobox-like domain superfamily LOS88_00390 IPR012337 Ribonuclease H-like superfamily LOS88_00390 IPR036397 Ribonuclease H superfamily LOS88_00405 IPR009057 Homeobox-like domain superfamily LOS88_00405 IPR012337 Ribonuclease H-like superfamily LOS88_00405 IPR036397 Ribonuclease H superfamily LOS88_00405 IPR001598 Transposase, IS30, conserved site LOS88_00405 IPR001584 Integrase, catalytic core LOS88_00410 IPR009057 Homeobox-like domain superfamily LOS88_00410 IPR001584 Integrase, catalytic core LOS88_00410 IPR012337 Ribonuclease H-like superfamily LOS88_00410 IPR036397 Ribonuclease H superfamily LOS88_00410 IPR001598 Transposase, IS30, conserved site LOS88_00445 IPR013986 DExx box DNA helicase domain superfamily LOS88_00445 IPR014017 UvrD-like DNA helicase, C-terminal LOS88_00445 IPR000212 DNA helicase, UvrD/REP type LOS88_00445 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00445 IPR014016 UvrD-like helicase, ATP-binding domain LOS88_00445 IPR034739 UvrD/AddA helicase, N-terminal LOS88_00445 IPR005753 DNA helicase, ATP-dependent, UvrD type LOS88_00450 IPR028082 Periplasmic binding protein-like I LOS88_00450 IPR003760 ABC transporter substrate-binding protein PnrA-like LOS88_00455 IPR003439 ABC transporter-like LOS88_00455 IPR003593 AAA+ ATPase domain LOS88_00455 IPR017871 ABC transporter, conserved site LOS88_00455 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00460 IPR002229 Blood group Rhesus C/E/D polypeptide LOS88_00460 IPR001851 ABC transporter, permease LOS88_00465 IPR001851 ABC transporter, permease LOS88_00470 IPR008334 5'-Nucleotidase, C-terminal LOS88_00470 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LOS88_00470 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LOS88_00470 IPR041827 CpdB, N-terminal metallophosphatase domain LOS88_00470 IPR006146 5'-Nucleotidase, conserved site LOS88_00470 IPR029052 Metallo-dependent phosphatase-like LOS88_00470 IPR006179 5'-Nucleotidase/apyrase LOS88_00470 IPR019931 LPXTG cell wall anchor domain LOS88_00480 IPR000644 CBS domain LOS88_00480 IPR006668 Magnesium transporter, MgtE intracellular domain LOS88_00480 IPR038048 Magnesium transporter MgtE, transmembrane domain LOS88_00480 IPR006669 Magnesium transporter MgtE LOS88_00480 IPR006667 SLC41 divalent cation transporters, integral membrane domain LOS88_00480 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily LOS88_00480 IPR038076 MgtE, N-terminal domain superfamily LOS88_00485 IPR037115 Sirohaem synthase, dimerisation domain superfamily LOS88_00485 IPR028281 Siroheme synthase, central domain LOS88_00485 IPR036291 NAD(P)-binding domain superfamily LOS88_00485 IPR006366 Uroporphyrin-III C-methyltransferase LOS88_00485 IPR012409 Sirohaem synthase LOS88_00485 IPR014776 Tetrapyrrole methylase, subdomain 2 LOS88_00485 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site LOS88_00485 IPR006367 Sirohaem synthase, N-terminal LOS88_00485 IPR019478 Sirohaem synthase, dimerisation domain LOS88_00485 IPR014777 Tetrapyrrole methylase, subdomain 1 LOS88_00485 IPR000878 Tetrapyrrole methylase LOS88_00485 IPR035996 Tetrapyrrole methylase superfamily LOS88_00490 IPR000292 Formate/nitrite transporter LOS88_00490 IPR023271 Aquaporin-like LOS88_00490 IPR024002 Formate/nitrite transporter, conserved site LOS88_00495 IPR017881 Nitrite reductase (NADH) small subunit LOS88_00495 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LOS88_00495 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type LOS88_00500 IPR007419 BFD-like [2Fe-2S]-binding domain LOS88_00500 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LOS88_00500 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LOS88_00500 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_00500 IPR023753 FAD/NAD(P)-binding domain LOS88_00500 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LOS88_00500 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LOS88_00500 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB LOS88_00500 IPR017121 Nitrite reductase [NAD(P)H], large subunit LOS88_00500 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LOS88_00500 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal LOS88_00505 IPR000412 ABC-2 transporter LOS88_00510 IPR000412 ABC-2 transporter LOS88_00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00515 IPR017871 ABC transporter, conserved site LOS88_00515 IPR003593 AAA+ ATPase domain LOS88_00515 IPR003439 ABC transporter-like LOS88_00520 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG LOS88_00520 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_00535 IPR019489 Clp ATPase, C-terminal LOS88_00535 IPR003959 ATPase, AAA-type, core LOS88_00535 IPR004491 Heat shock protein HslU LOS88_00535 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00535 IPR003593 AAA+ ATPase domain LOS88_00540 IPR023333 Proteasome B-type subunit LOS88_00540 IPR001353 Proteasome, subunit alpha/beta LOS88_00540 IPR029055 Nucleophile aminohydrolases, N-terminal LOS88_00540 IPR022281 ATP-dependent protease, HslV subunit LOS88_00550 IPR001278 Arginine-tRNA ligase LOS88_00550 IPR005148 Arginyl tRNA synthetase N-terminal domain LOS88_00550 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LOS88_00550 IPR008909 DALR anticodon binding LOS88_00550 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_00550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_00550 IPR035684 Arginyl-tRNA synthetase, catalytic core domain LOS88_00550 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily LOS88_00560 IPR007630 RNA polymerase sigma-70 region 4 LOS88_00560 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_00560 IPR013324 RNA polymerase sigma factor, region 3/4-like LOS88_00560 IPR013325 RNA polymerase sigma factor, region 2 LOS88_00560 IPR014284 RNA polymerase sigma-70 like domain LOS88_00560 IPR039425 RNA polymerase sigma-70 like LOS88_00560 IPR007627 RNA polymerase sigma-70 region 2 LOS88_00570 IPR003824 Undecaprenyl-diphosphatase UppP LOS88_00575 IPR018052 Aldose 1-epimerase, conserved site LOS88_00575 IPR013458 Aldose 1-epimerase, bacterial LOS88_00575 IPR015443 Aldose 1-epimerase LOS88_00575 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase LOS88_00575 IPR011013 Galactose mutarotase-like domain superfamily LOS88_00575 IPR014718 Glycoside hydrolase-type carbohydrate-binding LOS88_00580 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_00580 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_00580 IPR006206 Mevalonate/galactokinase LOS88_00580 IPR006203 GHMP kinase, ATP-binding, conserved site LOS88_00580 IPR013750 GHMP kinase, C-terminal domain LOS88_00580 IPR036554 GHMP kinase, C-terminal domain superfamily LOS88_00580 IPR019539 Galactokinase galactose-binding domain LOS88_00580 IPR019741 Galactokinase, conserved site LOS88_00580 IPR000705 Galactokinase LOS88_00580 IPR006204 GHMP kinase N-terminal domain LOS88_00580 IPR022963 Galactokinase, bacterial LOS88_00585 IPR001937 Galactose-1-phosphate uridyl transferase, class I LOS88_00585 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site LOS88_00585 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal LOS88_00585 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal LOS88_00585 IPR036265 HIT-like superfamily LOS88_00590 IPR016040 NAD(P)-binding domain LOS88_00590 IPR036291 NAD(P)-binding domain superfamily LOS88_00590 IPR005886 UDP-glucose 4-epimerase LOS88_00595 IPR000843 LacI-type HTH domain LOS88_00595 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_00595 IPR028082 Periplasmic binding protein-like I LOS88_00600 IPR032312 Beta-galactosidase, domain 4 LOS88_00600 IPR013783 Immunoglobulin-like fold LOS88_00600 IPR017853 Glycoside hydrolase superfamily LOS88_00600 IPR006104 Glycosyl hydrolases family 2, sugar binding domain LOS88_00600 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich LOS88_00600 IPR023230 Glycoside hydrolase, family 2, conserved site LOS88_00600 IPR006103 Glycoside hydrolase family 2, catalytic domain LOS88_00600 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase LOS88_00600 IPR006101 Glycoside hydrolase, family 2 LOS88_00600 IPR014718 Glycoside hydrolase-type carbohydrate-binding LOS88_00600 IPR008979 Galactose-binding-like domain superfamily LOS88_00600 IPR011013 Galactose mutarotase-like domain superfamily LOS88_00600 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily LOS88_00600 IPR004199 Beta galactosidase small chain/ domain 5 LOS88_00605 IPR028082 Periplasmic binding protein-like I LOS88_00605 IPR025997 Periplasmic binding protein LOS88_00610 IPR003593 AAA+ ATPase domain LOS88_00610 IPR003439 ABC transporter-like LOS88_00610 IPR017871 ABC transporter, conserved site LOS88_00610 IPR015862 ABC transporter, galactose import, MglA LOS88_00610 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00615 IPR030158 Galactoside transport system permease protein MglC LOS88_00615 IPR001851 ABC transporter, permease LOS88_00620 IPR004090 Chemotaxis methyl-accepting receptor LOS88_00620 IPR033479 Double Cache domain 1 LOS88_00620 IPR003660 HAMP domain LOS88_00620 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_00620 IPR029151 Periplasmic sensor-like domain superfamily LOS88_00620 IPR000727 Target SNARE coiled-coil homology domain LOS88_00625 IPR030390 RNA methyltransferase TrmA, active site LOS88_00625 IPR030391 RNA methyltransferase TrmA, conserved site LOS88_00625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_00625 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA LOS88_00625 IPR010280 (Uracil-5)-methyltransferase family LOS88_00660 IPR032610 Domain of unknown function DUF2172 LOS88_00660 IPR032622 UCP01524, winged helix-turn-helix domain LOS88_00660 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like LOS88_00660 IPR032589 Domain of unknown function DUF4910 LOS88_00660 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_00670 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_00670 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain LOS88_00670 IPR013780 Glycosyl hydrolase, all-beta LOS88_00670 IPR017853 Glycoside hydrolase superfamily LOS88_00670 IPR014756 Immunoglobulin E-set LOS88_00670 IPR017069 Maltodextrin glucosidase LOS88_00685 IPR018181 Heat shock protein 70, conserved site LOS88_00685 IPR013126 Heat shock protein 70 family LOS88_00685 IPR042054 YegD-like LOS88_00690 IPR036291 NAD(P)-binding domain superfamily LOS88_00690 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LOS88_00690 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LOS88_00690 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOS88_00690 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LOS88_00695 IPR010292 Uncharacterised protein family CreA LOS88_00710 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LOS88_00710 IPR012784 RNA polymerase-binding transcription factor DksA LOS88_00710 IPR037187 DksA, N-terminal domain superfamily LOS88_00710 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LOS88_00710 IPR000962 Zinc finger, DksA/TraR C4-type LOS88_00715 IPR036651 Glutamine synthetase, N-terminal domain superfamily LOS88_00715 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LOS88_00715 IPR008146 Glutamine synthetase, catalytic domain LOS88_00715 IPR027303 Glutamine synthetase, glycine-rich site LOS88_00720 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_00720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_00720 IPR005814 Aminotransferase class-III LOS88_00720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_00725 IPR006059 Bacterial extracellular solute-binding protein LOS88_00725 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein LOS88_00730 IPR006059 Bacterial extracellular solute-binding protein LOS88_00730 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein LOS88_00735 IPR013611 Transport-associated OB, type 2 LOS88_00735 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit LOS88_00735 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_00735 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00735 IPR003439 ABC transporter-like LOS88_00735 IPR017871 ABC transporter, conserved site LOS88_00735 IPR003593 AAA+ ATPase domain LOS88_00740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_00740 IPR035906 MetI-like superfamily LOS88_00745 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_00745 IPR035906 MetI-like superfamily LOS88_00750 IPR005163 3-alpha domain LOS88_00750 IPR005302 Molybdenum cofactor sulfurase, C-terminal LOS88_00750 IPR011037 Pyruvate kinase-like, insert domain superfamily LOS88_00765 IPR006683 Thioesterase domain LOS88_00765 IPR029069 HotDog domain superfamily LOS88_00765 IPR003736 Phenylacetic acid degradation-related domain LOS88_00770 IPR011545 DEAD/DEAH box helicase domain LOS88_00770 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_00770 IPR018982 RQC domain LOS88_00770 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00770 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LOS88_00770 IPR010997 HRDC-like superfamily LOS88_00770 IPR001650 Helicase, C-terminal LOS88_00770 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_00770 IPR004589 DNA helicase, ATP-dependent, RecQ type LOS88_00770 IPR002121 HRDC domain LOS88_00770 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial LOS88_00775 IPR009056 Cytochrome c-like domain LOS88_00775 IPR036909 Cytochrome c-like domain superfamily LOS88_00780 IPR003846 Protein adenylyltransferase SelO LOS88_00790 IPR003744 Queuosine precursor transporter LOS88_00795 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria LOS88_00795 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LOS88_00795 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily LOS88_00795 IPR010203 Regulator of ribonuclease activity A LOS88_00800 IPR004090 Chemotaxis methyl-accepting receptor LOS88_00800 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_00800 IPR003660 HAMP domain LOS88_00810 IPR034704 L28p-like LOS88_00810 IPR002150 Ribosomal protein L31 LOS88_00810 IPR027491 Ribosomal protein L31 type A LOS88_00810 IPR042105 Ribosomal protein L31 superfamily LOS88_00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00815 IPR011545 DEAD/DEAH box helicase domain LOS88_00815 IPR001650 Helicase, C-terminal LOS88_00815 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain LOS88_00815 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_00815 IPR041236 Primosomal protein N, C-terminal domain LOS88_00815 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily LOS88_00815 IPR041222 Primosomal protein N', 3' DNA-binding domain LOS88_00815 IPR005259 Primosomal protein N' LOS88_00825 IPR016040 NAD(P)-binding domain LOS88_00825 IPR021295 Protein of unknown function DUF2867 LOS88_00825 IPR036291 NAD(P)-binding domain superfamily LOS88_00830 IPR018227 Amino acid/polyamine transporter 2 LOS88_00830 IPR013061 Tryptophan/tryrosine permease, conserved site LOS88_00830 IPR013059 Tryptophan/tyrosine transporter LOS88_00835 IPR015884 Malic enzyme, conserved site LOS88_00835 IPR036291 NAD(P)-binding domain superfamily LOS88_00835 IPR001891 Malic oxidoreductase LOS88_00835 IPR012302 Malic enzyme, NAD-binding LOS88_00835 IPR037062 Malic enzyme, N-terminal domain superfamily LOS88_00835 IPR012301 Malic enzyme, N-terminal domain LOS88_00840 IPR017039 Virulence factor BrkB LOS88_00840 IPR023679 Uncharacterised protein family UPF0761, bacterial LOS88_00845 IPR003732 D-aminoacyl-tRNA deacylase DTD LOS88_00845 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily LOS88_00850 IPR037163 Spermidine synthase, tetramerisation domain superfamily LOS88_00850 IPR035246 Spermidine synthase, tetramerisation domain LOS88_00850 IPR001045 Spermidine/spermine synthases LOS88_00850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_00850 IPR030373 Polyamine biosynthesis domain, conserved site LOS88_00850 IPR030374 Polyamine biosynthesis domain LOS88_00855 IPR016181 Acyl-CoA N-acyltransferase LOS88_00855 IPR000182 GNAT domain LOS88_00855 IPR029069 HotDog domain superfamily LOS88_00855 IPR012660 Thioesterase, putative LOS88_00865 IPR033454 RecG, wedge domain LOS88_00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00865 IPR004609 ATP-dependent DNA helicase RecG LOS88_00865 IPR001650 Helicase, C-terminal LOS88_00865 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_00865 IPR012340 Nucleic acid-binding, OB-fold LOS88_00865 IPR011545 DEAD/DEAH box helicase domain LOS88_00870 IPR016270 CDP-alcohol phosphatidyltransferase class-II family LOS88_00870 IPR025202 Phospholipase D-like domain LOS88_00870 IPR001736 Phospholipase D/Transphosphatidylase LOS88_00875 IPR003474 Gluconate transporter LOS88_00880 IPR006001 Carbohydrate kinase, thermoresistant glucokinase LOS88_00880 IPR031322 Shikimate kinase/gluconokinase LOS88_00880 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_00885 IPR004786 6-phosphogluconate dehydratase LOS88_00885 IPR042096 Dihydroxy-acid dehydratase, C-terminal LOS88_00885 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase LOS88_00885 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site LOS88_00885 IPR037237 IlvD/EDD, N-terminal domain LOS88_00890 IPR000887 KDPG/KHG aldolase LOS88_00890 IPR013785 Aldolase-type TIM barrel LOS88_00890 IPR031337 KDPG/KHG aldolase, active site 1 LOS88_00890 IPR031338 KDPG/KHG aldolase, active site 2 LOS88_00895 IPR028082 Periplasmic binding protein-like I LOS88_00895 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_00895 IPR000843 LacI-type HTH domain LOS88_00895 IPR001761 Periplasmic binding protein/LacI sugar binding domain LOS88_00905 IPR011055 Duplicated hybrid motif LOS88_00905 IPR016047 Peptidase M23 LOS88_00910 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily LOS88_00910 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_00910 IPR011258 BPG-independent PGAM, N-terminal LOS88_00910 IPR006124 Metalloenzyme LOS88_00910 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent LOS88_00915 IPR001763 Rhodanese-like domain LOS88_00915 IPR036873 Rhodanese-like domain superfamily LOS88_00920 IPR003708 Bacterial protein export chaperone SecB LOS88_00920 IPR035958 SecB-like superfamily LOS88_00925 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_00925 IPR036291 NAD(P)-binding domain superfamily LOS88_00925 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal LOS88_00925 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal LOS88_00925 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent LOS88_00925 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LOS88_00930 IPR017726 Fe/S biogenesis protein NfuA LOS88_00930 IPR000361 FeS cluster biogenesis LOS88_00930 IPR034904 Fe-S cluster assembly domain superfamily LOS88_00930 IPR035903 HesB-like domain superfamily LOS88_00930 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal LOS88_00935 IPR005222 Competence protein ComF LOS88_00935 IPR029057 Phosphoribosyltransferase-like LOS88_00935 IPR000836 Phosphoribosyltransferase domain LOS88_00940 IPR029058 Alpha/Beta hydrolase fold LOS88_00940 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase LOS88_00940 IPR000073 Alpha/beta hydrolase fold-1 LOS88_00960 IPR037027 YqgF/RNase H-like domain superfamily LOS88_00960 IPR012337 Ribonuclease H-like superfamily LOS88_00960 IPR012340 Nucleic acid-binding, OB-fold LOS88_00960 IPR041692 HHH domain 9 LOS88_00960 IPR006641 YqgF/RNase H-like domain LOS88_00960 IPR022967 RNA-binding domain, S1 LOS88_00960 IPR003029 S1 domain LOS88_00960 IPR023323 Tex-like domain superfamily LOS88_00960 IPR023319 Tex-like protein, HTH domain superfamily LOS88_00960 IPR018974 Tex-like protein, N-terminal LOS88_00960 IPR032639 Tex protein, YqgF-like domain LOS88_00960 IPR010994 RuvA domain 2-like LOS88_00965 IPR028624 Transcription elongation factor GreA/GreB LOS88_00965 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LOS88_00965 IPR018151 Transcription elongation factor, GreA/GreB, conserved site LOS88_00965 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LOS88_00965 IPR023459 Transcription elongation factor GreA/GreB family LOS88_00965 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal LOS88_00965 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily LOS88_00965 IPR006358 Transcription elongation factor GreB LOS88_00970 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_00970 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_00970 IPR011006 CheY-like superfamily LOS88_00970 IPR039420 Transcriptional regulatory protein WalR-like LOS88_00970 IPR001789 Signal transduction response regulator, receiver domain LOS88_00970 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_00975 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_00975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_00975 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_00975 IPR005467 Histidine kinase domain LOS88_00975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_00975 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_00975 IPR003660 HAMP domain LOS88_00985 IPR018268 Ribosomal protein S10, conserved site LOS88_00985 IPR036838 Ribosomal protein S10 domain superfamily LOS88_00985 IPR001848 Ribosomal protein S10 LOS88_00985 IPR027486 Ribosomal protein S10 domain LOS88_00990 IPR019926 Ribosomal protein L3, conserved site LOS88_00990 IPR000597 Ribosomal protein L3 LOS88_00990 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_00990 IPR019927 Ribosomal protein L3, bacterial/organelle-type LOS88_00995 IPR002136 Ribosomal protein L4/L1e LOS88_00995 IPR023574 Ribosomal protein L4 domain superfamily LOS88_00995 IPR013005 50S ribosomal protein uL4 LOS88_01000 IPR013025 Ribosomal protein L25/L23 LOS88_01000 IPR012678 Ribosomal protein L23/L15e core domain superfamily LOS88_01000 IPR001014 Ribosomal protein L23/L25, conserved site LOS88_01000 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LOS88_01005 IPR008991 Translation protein SH3-like domain superfamily LOS88_01005 IPR014726 Ribosomal protein L2, domain 3 LOS88_01005 IPR022669 Ribosomal protein L2, C-terminal LOS88_01005 IPR005880 Ribosomal protein L2, bacterial/organellar-type LOS88_01005 IPR002171 Ribosomal protein L2 LOS88_01005 IPR014722 Ribosomal protein L2, domain 2 LOS88_01005 IPR022666 Ribosomal Proteins L2, RNA binding domain LOS88_01005 IPR012340 Nucleic acid-binding, OB-fold LOS88_01010 IPR020934 Ribosomal protein S19 conserved site LOS88_01010 IPR023575 Ribosomal protein S19, superfamily LOS88_01010 IPR005732 Ribosomal protein S19, bacterial-type LOS88_01010 IPR002222 Ribosomal protein S19/S15 LOS88_01015 IPR036394 Ribosomal protein L22/L17 superfamily LOS88_01015 IPR018260 Ribosomal protein L22/L17, conserved site LOS88_01015 IPR001063 Ribosomal protein L22/L17 LOS88_01015 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type LOS88_01020 IPR004087 K Homology domain LOS88_01020 IPR015946 K homology domain-like, alpha/beta LOS88_01020 IPR004044 K Homology domain, type 2 LOS88_01020 IPR005704 Ribosomal protein S3, bacterial-type LOS88_01020 IPR001351 Ribosomal protein S3, C-terminal LOS88_01020 IPR036419 Ribosomal protein S3, C-terminal domain superfamily LOS88_01020 IPR018280 Ribosomal protein S3, conserved site LOS88_01020 IPR009019 K homology domain superfamily, prokaryotic type LOS88_01025 IPR016180 Ribosomal protein L10e/L16 LOS88_01025 IPR036920 Ribosomal protein L10e/L16 superfamily LOS88_01025 IPR000114 Ribosomal protein L16 LOS88_01025 IPR020798 Ribosomal protein L16, conserved site LOS88_01030 IPR001854 Ribosomal protein L29/L35 LOS88_01030 IPR036049 Ribosomal protein L29/L35 superfamily LOS88_01030 IPR018254 Ribosomal protein L29, conserved site LOS88_01035 IPR000266 Ribosomal protein S17/S11 LOS88_01035 IPR012340 Nucleic acid-binding, OB-fold LOS88_01035 IPR019979 Ribosomal protein S17, conserved site LOS88_01035 IPR019984 30S ribosomal protein S17 LOS88_01040 IPR019972 Ribosomal protein L14P, conserved site LOS88_01040 IPR005745 Ribosomal protein L14P, bacterial-type LOS88_01040 IPR000218 Ribosomal protein L14P LOS88_01040 IPR036853 Ribosomal protein L14 superfamily LOS88_01045 IPR008991 Translation protein SH3-like domain superfamily LOS88_01045 IPR003256 Ribosomal protein L24 LOS88_01045 IPR014722 Ribosomal protein L2, domain 2 LOS88_01045 IPR041988 Ribosomal Protein L26/L24, KOW domain LOS88_01045 IPR005824 KOW LOS88_01045 IPR005825 Ribosomal protein L24/L26, conserved site LOS88_01050 IPR020930 Ribosomal protein L5, bacterial-type LOS88_01050 IPR002132 Ribosomal protein L5 LOS88_01050 IPR031309 Ribosomal protein L5, C-terminal LOS88_01050 IPR031310 Ribosomal protein L5, N-terminal LOS88_01050 IPR022803 Ribosomal protein L5 domain superfamily LOS88_01050 IPR020929 Ribosomal protein L5, conserved site LOS88_01055 IPR018271 Ribosomal protein S14, conserved site LOS88_01055 IPR023036 Ribosomal protein S14, bacterial/plastid LOS88_01055 IPR001209 Ribosomal protein S14 LOS88_01060 IPR000630 Ribosomal protein S8 LOS88_01060 IPR035987 Ribosomal protein S8 superfamily LOS88_01065 IPR019906 Ribosomal protein L6, bacterial-type LOS88_01065 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily LOS88_01065 IPR020040 Ribosomal protein L6, alpha-beta domain LOS88_01065 IPR000702 Ribosomal protein L6 LOS88_01065 IPR002358 Ribosomal protein L6, conserved site LOS88_01070 IPR004389 Ribosomal protein L18, bacterial-type LOS88_01070 IPR005484 Ribosomal protein L18 LOS88_01075 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_01075 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_01075 IPR005324 Ribosomal protein S5, C-terminal LOS88_01075 IPR005712 Ribosomal protein S5, bacterial-type LOS88_01075 IPR000851 Ribosomal protein S5 LOS88_01075 IPR013810 Ribosomal protein S5, N-terminal LOS88_01075 IPR018192 Ribosomal protein S5, N-terminal, conserved site LOS88_01080 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily LOS88_01080 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LOS88_01080 IPR018038 Ribosomal protein L30, conserved site LOS88_01080 IPR005996 Ribosomal protein L30, bacterial-type LOS88_01085 IPR021131 Ribosomal protein L18e/L15P LOS88_01085 IPR001196 Ribosomal protein L15, conserved site LOS88_01085 IPR030878 Ribosomal protein L15 LOS88_01085 IPR036227 Ribosomal L18e/L15P superfamily LOS88_01085 IPR005749 Ribosomal protein L15, bacterial-type LOS88_01090 IPR023201 SecY domain superfamily LOS88_01090 IPR002208 SecY/SEC61-alpha family LOS88_01090 IPR026593 Protein translocase subunit SecY LOS88_01090 IPR030659 SecY conserved site LOS88_01095 IPR000473 Ribosomal protein L36 LOS88_01095 IPR035977 Ribosomal protein L36 superfamily LOS88_01100 IPR027437 30s ribosomal protein S13, C-terminal LOS88_01100 IPR001892 Ribosomal protein S13 LOS88_01100 IPR010979 Ribosomal protein S13-like, H2TH LOS88_01100 IPR019980 Ribosomal protein S13, bacterial-type LOS88_01100 IPR018269 Ribosomal protein S13, conserved site LOS88_01105 IPR001971 Ribosomal protein S11 LOS88_01105 IPR019981 Ribosomal protein S11, bacterial-type LOS88_01105 IPR018102 Ribosomal S11, conserved site LOS88_01105 IPR036967 Ribosomal protein S11 superfamily LOS88_01110 IPR022801 Ribosomal protein S4/S9 LOS88_01110 IPR001912 Ribosomal protein S4/S9, N-terminal LOS88_01110 IPR018079 Ribosomal protein S4, conserved site LOS88_01110 IPR005709 Ribosomal protein S4, bacterial-type LOS88_01110 IPR002942 RNA-binding S4 domain LOS88_01110 IPR036986 RNA-binding S4 domain superfamily LOS88_01115 IPR011262 DNA-directed RNA polymerase, insert domain LOS88_01115 IPR036643 DNA-directed RNA polymerase, insert domain superfamily LOS88_01115 IPR011260 RNA polymerase, alpha subunit, C-terminal LOS88_01115 IPR036603 RNA polymerase, RBP11-like subunit LOS88_01115 IPR011773 DNA-directed RNA polymerase, alpha subunit LOS88_01115 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type LOS88_01120 IPR036373 Ribosomal protein L17 superfamily LOS88_01120 IPR000456 Ribosomal protein L17 LOS88_01165 IPR002611 IstB-like ATP-binding protein LOS88_01165 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_01165 IPR003593 AAA+ ATPase domain LOS88_01170 IPR001584 Integrase, catalytic core LOS88_01170 IPR012337 Ribonuclease H-like superfamily LOS88_01170 IPR036397 Ribonuclease H superfamily LOS88_01170 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LOS88_01180 IPR012910 TonB-dependent receptor, plug domain LOS88_01180 IPR037066 TonB-dependent receptor, plug domain superfamily LOS88_01180 IPR000531 TonB-dependent receptor-like, beta-barrel LOS88_01180 IPR010916 TonB box, conserved site LOS88_01180 IPR010917 TonB-dependent receptor, conserved site LOS88_01180 IPR039426 Vitamin B12 transporter BtuB-like LOS88_01180 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LOS88_01185 IPR033416 Periplasmic sensor domain CHASE7 LOS88_01185 IPR029787 Nucleotide cyclase LOS88_01185 IPR000160 GGDEF domain LOS88_01190 IPR003660 HAMP domain LOS88_01190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_01190 IPR005467 Histidine kinase domain LOS88_01190 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_01190 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_01190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_01190 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_01195 IPR011006 CheY-like superfamily LOS88_01195 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_01195 IPR001789 Signal transduction response regulator, receiver domain LOS88_01195 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_01195 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_01195 IPR039420 Transcriptional regulatory protein WalR-like LOS88_01205 IPR004090 Chemotaxis methyl-accepting receptor LOS88_01205 IPR003660 HAMP domain LOS88_01205 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_01205 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_01205 IPR000727 Target SNARE coiled-coil homology domain LOS88_01215 IPR036390 Winged helix DNA-binding domain superfamily LOS88_01215 IPR000847 Transcription regulator HTH, LysR LOS88_01215 IPR005119 LysR, substrate-binding LOS88_01215 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_01225 IPR011051 RmlC-like cupin domain superfamily LOS88_01225 IPR012093 Pirin LOS88_01225 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain LOS88_01225 IPR003829 Pirin, N-terminal domain LOS88_01225 IPR014710 RmlC-like jelly roll fold LOS88_01230 IPR032808 DoxX family LOS88_01235 IPR013986 DExx box DNA helicase domain superfamily LOS88_01235 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_01235 IPR006697 RecBCD enzyme subunit RecC LOS88_01235 IPR041500 RecC, C-terminal LOS88_01235 IPR011335 Restriction endonuclease type II-like LOS88_01240 IPR034739 UvrD/AddA helicase, N-terminal LOS88_01240 IPR014016 UvrD-like helicase, ATP-binding domain LOS88_01240 IPR011335 Restriction endonuclease type II-like LOS88_01240 IPR011604 Exonuclease, phage-type/RecB, C-terminal LOS88_01240 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type LOS88_01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_01240 IPR000212 DNA helicase, UvrD/REP type LOS88_01240 IPR004586 RecBCD enzyme subunit RecB LOS88_01240 IPR014017 UvrD-like DNA helicase, C-terminal LOS88_01245 IPR027785 UvrD-like helicase C-terminal domain LOS88_01245 IPR006344 RecBCD enzyme subunit RecD LOS88_01245 IPR003593 AAA+ ATPase domain LOS88_01245 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain LOS88_01245 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_01280 IPR036390 Winged helix DNA-binding domain superfamily LOS88_01280 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_01280 IPR017722 Phosphonate utilization transcriptional regulator PhnR LOS88_01280 IPR011663 UbiC transcription regulator-associated LOS88_01280 IPR000524 Transcription regulator HTH, GntR LOS88_01280 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LOS88_01295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_01295 IPR035906 MetI-like superfamily LOS88_01305 IPR003593 AAA+ ATPase domain LOS88_01305 IPR003439 ABC transporter-like LOS88_01305 IPR017871 ABC transporter, conserved site LOS88_01305 IPR015853 ABC transporter, ferric cation import, FbpC LOS88_01305 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_01305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_01305 IPR013611 Transport-associated OB, type 2 LOS88_01310 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like LOS88_01310 IPR036412 HAD-like superfamily LOS88_01310 IPR023214 HAD superfamily LOS88_01315 IPR000160 GGDEF domain LOS88_01315 IPR009050 Globin-like superfamily LOS88_01315 IPR012292 Globin/Protoglobin LOS88_01315 IPR029787 Nucleotide cyclase LOS88_01315 IPR039435 Diguanylate cyclase DosC, globin sensor domain LOS88_01335 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LOS88_01335 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase LOS88_01335 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_01335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_01335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_01345 IPR000914 Solute-binding protein family 5 domain LOS88_01345 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain LOS88_01345 IPR023767 Transcriptional regulator SgrR LOS88_01345 IPR036390 Winged helix DNA-binding domain superfamily LOS88_01345 IPR039424 Solute-binding protein family 5 LOS88_01350 IPR000763 Catalase-peroxidase haem LOS88_01350 IPR019794 Peroxidase, active site LOS88_01350 IPR002016 Haem peroxidase LOS88_01350 IPR010255 Haem peroxidase superfamily LOS88_01365 IPR004961 Lipase chaperone LOS88_01370 IPR029058 Alpha/Beta hydrolase fold LOS88_01370 IPR000073 Alpha/beta hydrolase fold-1 LOS88_01375 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 LOS88_01375 IPR024088 Tyrosine-tRNA ligase, bacterial-type LOS88_01375 IPR036986 RNA-binding S4 domain superfamily LOS88_01375 IPR002307 Tyrosine-tRNA ligase LOS88_01375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_01375 IPR002305 Aminoacyl-tRNA synthetase, class Ic LOS88_01375 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_01375 IPR002942 RNA-binding S4 domain LOS88_01380 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_01380 IPR000792 Transcription regulator LuxR, C-terminal LOS88_01380 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_01400 IPR002226 Catalase haem-binding site LOS88_01400 IPR020835 Catalase superfamily LOS88_01400 IPR011614 Catalase core domain LOS88_01400 IPR010582 Catalase immune-responsive domain LOS88_01400 IPR037060 Catalase core domain superfamily LOS88_01400 IPR024708 Catalase active site LOS88_01400 IPR040333 Catalase, clade 3 LOS88_01400 IPR018028 Catalase, mono-functional, haem-containing LOS88_01400 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 LOS88_01405 IPR016181 Acyl-CoA N-acyltransferase LOS88_01405 IPR000182 GNAT domain LOS88_01405 IPR017813 Mycothiol acetyltransferase LOS88_01425 IPR002303 Valine-tRNA ligase LOS88_01425 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LOS88_01425 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm LOS88_01425 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LOS88_01425 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LOS88_01425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_01425 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LOS88_01425 IPR033705 Valyl tRNA synthetase, anticodon-binding domain LOS88_01425 IPR002300 Aminoacyl-tRNA synthetase, class Ia LOS88_01425 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_01425 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LOS88_01430 IPR007459 DNA polymerase III chi subunit, HolC LOS88_01430 IPR036768 DNA polymerase III subunit chi superfamily LOS88_01435 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LOS88_01435 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LOS88_01435 IPR023042 Peptidase M17, leucine aminopeptidase LOS88_01435 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal LOS88_01440 IPR005495 Permease LptG/LptF-related LOS88_01440 IPR030922 LPS export ABC transporter permease LptF LOS88_01445 IPR030923 LPS export ABC transporter permease LptG LOS88_01445 IPR005495 Permease LptG/LptF-related LOS88_01490 IPR035089 Tail sheath protein, subtilisin-like domain LOS88_01490 IPR020287 Tail sheath protein, C-terminal domain LOS88_01605 IPR030935 Phage portal protein PBSX family, Proteobacteria LOS88_01605 IPR006430 Phage portal protein PBSX family LOS88_01705 IPR015927 Peptidase S24/S26A/S26B/S26C LOS88_01705 IPR036286 LexA/Signal peptidase-like superfamily LOS88_01705 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_01705 IPR001387 Cro/C1-type helix-turn-helix domain LOS88_01705 IPR039418 LexA-like LOS88_01715 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_01715 IPR013762 Integrase-like, catalytic domain superfamily LOS88_01715 IPR002104 Integrase, catalytic domain LOS88_01715 IPR010998 Integrase/recombinase, N-terminal LOS88_01715 IPR004107 Integrase, SAM-like, N-terminal LOS88_01715 IPR011931 Tyrosine recombinase XerC LOS88_01715 IPR023009 Tyrosine recombinase XerC/XerD LOS88_01720 IPR002104 Integrase, catalytic domain LOS88_01720 IPR010998 Integrase/recombinase, N-terminal LOS88_01720 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_01720 IPR013762 Integrase-like, catalytic domain superfamily LOS88_01730 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_01730 IPR013762 Integrase-like, catalytic domain superfamily LOS88_01730 IPR002104 Integrase, catalytic domain LOS88_01730 IPR010998 Integrase/recombinase, N-terminal LOS88_01730 IPR004107 Integrase, SAM-like, N-terminal LOS88_01730 IPR011931 Tyrosine recombinase XerC LOS88_01730 IPR023009 Tyrosine recombinase XerC/XerD LOS88_01785 IPR010105 TonB-dependent siderophore receptor LOS88_01785 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LOS88_01785 IPR000531 TonB-dependent receptor-like, beta-barrel LOS88_01785 IPR037066 TonB-dependent receptor, plug domain superfamily LOS88_01785 IPR012910 TonB-dependent receptor, plug domain LOS88_01785 IPR039423 TonB-dependent receptor-like LOS88_01795 IPR012338 Beta-lactamase/transpeptidase-like LOS88_01795 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LOS88_01795 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LOS88_01800 IPR002293 Amino acid/polyamine transporter I LOS88_01815 IPR033900 Porin domain, Gram-negative type LOS88_01815 IPR023614 Porin domain superfamily LOS88_01820 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase LOS88_01835 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX LOS88_01840 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase LOS88_01840 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily LOS88_01840 IPR039793 Uroporphyrinogen-III synthase LOS88_01845 IPR000860 Porphobilinogen deaminase LOS88_01845 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site LOS88_01845 IPR022417 Porphobilinogen deaminase, N-terminal LOS88_01845 IPR022418 Porphobilinogen deaminase, C-terminal LOS88_01845 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily LOS88_01850 IPR000274 Adenylate cyclase, class-I LOS88_01850 IPR024686 Adenylate cyclase class-I, conserved site LOS88_01850 IPR024685 Adenylate cyclase class-I, N-terminal domain LOS88_01855 IPR029058 Alpha/Beta hydrolase fold LOS88_01855 IPR003140 Phospholipase/carboxylesterase/thioesterase LOS88_01860 IPR002908 Frataxin/CyaY LOS88_01860 IPR036524 Frataxin/CyaY superfamily LOS88_01860 IPR020895 Frataxin conserved site LOS88_01870 IPR000183 Ornithine/DAP/Arg decarboxylase LOS88_01870 IPR029066 PLP-binding barrel LOS88_01870 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site LOS88_01870 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LOS88_01870 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LOS88_01870 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal LOS88_01870 IPR002986 Diaminopimelate decarboxylase, LysA LOS88_01870 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LOS88_01875 IPR018510 Diaminopimelate epimerase, active site LOS88_01875 IPR001653 Diaminopimelate epimerase, DapF LOS88_01885 IPR023009 Tyrosine recombinase XerC/XerD LOS88_01885 IPR011931 Tyrosine recombinase XerC LOS88_01885 IPR004107 Integrase, SAM-like, N-terminal LOS88_01885 IPR013762 Integrase-like, catalytic domain superfamily LOS88_01885 IPR002104 Integrase, catalytic domain LOS88_01885 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_01885 IPR010998 Integrase/recombinase, N-terminal LOS88_01890 IPR036412 HAD-like superfamily LOS88_01890 IPR006439 HAD hydrolase, subfamily IA LOS88_01890 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_01890 IPR023214 HAD superfamily LOS88_01900 IPR036390 Winged helix DNA-binding domain superfamily LOS88_01900 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_01900 IPR018335 Transcription regulator HTH, Crp-type, conserved site LOS88_01900 IPR014710 RmlC-like jelly roll fold LOS88_01900 IPR000595 Cyclic nucleotide-binding domain LOS88_01900 IPR018488 Cyclic nucleotide-binding, conserved site LOS88_01900 IPR018490 Cyclic nucleotide-binding-like LOS88_01900 IPR012318 Crp-type HTH domain LOS88_01910 IPR029062 Class I glutamine amidotransferase-like LOS88_01910 IPR017926 Glutamine amidotransferase LOS88_01910 IPR011697 Peptidase C26 LOS88_01915 IPR023153 PSPTO4464-like domain superfamily LOS88_01915 IPR006839 Ribosome-associated, YjgA LOS88_01920 IPR036059 Metalloprotease TldD/PmbA superfamily LOS88_01920 IPR002510 Metalloprotease TldD/PmbA LOS88_01920 IPR035068 Metalloprotease TldD/PmbA, N-terminal LOS88_01925 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase LOS88_01925 IPR001986 Enolpyruvate transferase domain LOS88_01925 IPR036968 Enolpyruvate transferase domain superfamily LOS88_01925 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta LOS88_01930 IPR002634 BolA protein LOS88_01930 IPR036065 BolA-like superfamily LOS88_01940 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC LOS88_01940 IPR042245 Tgt2/MlaC superfamily LOS88_01945 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD LOS88_01945 IPR003399 Mce/MlaD LOS88_01950 IPR030802 ABC transporter permease MalE LOS88_01950 IPR003453 ABC transport permease subunit MlaE, Proteobacteria LOS88_01955 IPR003439 ABC transporter-like LOS88_01955 IPR017871 ABC transporter, conserved site LOS88_01955 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl LOS88_01955 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_01955 IPR003593 AAA+ ATPase domain LOS88_01960 IPR000644 CBS domain LOS88_01960 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type LOS88_01960 IPR001347 Sugar isomerase (SIS) LOS88_01960 IPR035474 KpsF-like, SIS domain LOS88_01965 IPR010023 KdsC family LOS88_01965 IPR023214 HAD superfamily LOS88_01965 IPR036412 HAD-like superfamily LOS88_01970 IPR010664 Lipopolysaccharide assembly, LptC-related LOS88_01970 IPR026265 Lipopolysaccharide export system protein LptC LOS88_01975 IPR014340 Lipopolysaccharide export system protein LptA LOS88_01975 IPR005653 Organic solvent tolerance-like, N-terminal LOS88_01980 IPR003593 AAA+ ATPase domain LOS88_01980 IPR003439 ABC transporter-like LOS88_01980 IPR017871 ABC transporter, conserved site LOS88_01980 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LOS88_01980 IPR030921 LPS export ABC transporter, ATP-binding protein LptB LOS88_01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_01985 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily LOS88_01985 IPR000394 RNA polymerase sigma factor 54 LOS88_01985 IPR007046 RNA polymerase sigma factor 54, core-binding domain LOS88_01985 IPR007634 RNA polymerase sigma factor 54, DNA-binding LOS88_01990 IPR036567 Ribosome hibernation promotion factor-like LOS88_01990 IPR003489 Ribosome hibernation promoting factor/RaiA LOS88_01995 IPR016152 Phosphotransferase/anion transporter LOS88_01995 IPR002178 PTS EIIA type-2 domain LOS88_01995 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN LOS88_02000 IPR005337 RapZ-like family LOS88_02000 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02005 IPR035895 HPr-like superfamily LOS88_02005 IPR000032 Phosphocarrier protein HPr-like LOS88_02005 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LOS88_02005 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LOS88_02010 IPR007737 Mga helix-turn-helix domain LOS88_02010 IPR011608 PRD domain LOS88_02010 IPR036634 PRD domain superfamily LOS88_02010 IPR016152 Phosphotransferase/anion transporter LOS88_02010 IPR002178 PTS EIIA type-2 domain LOS88_02010 IPR013011 Phosphotransferase system, EIIB component, type 2 LOS88_02010 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_02010 IPR013196 Helix-turn-helix, type 11 LOS88_02010 IPR036095 PTS system IIB component-like superfamily LOS88_02015 IPR013785 Aldolase-type TIM barrel LOS88_02015 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase LOS88_02020 IPR018319 L-seryl-tRNA selenium transferase-like LOS88_02020 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like LOS88_02020 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_02020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_02025 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_02025 IPR020043 Deacetylase Atu3266-like LOS88_02025 IPR006680 Amidohydrolase-related LOS88_02025 IPR032466 Metal-dependent hydrolase LOS88_02055 IPR036034 PDZ superfamily LOS88_02055 IPR011783 Peptidase S1C, DegS LOS88_02055 IPR009003 Peptidase S1, PA clan LOS88_02055 IPR001940 Peptidase S1C LOS88_02055 IPR001478 PDZ domain LOS88_02060 IPR001478 PDZ domain LOS88_02060 IPR011782 Peptidase S1C, Do LOS88_02060 IPR009003 Peptidase S1, PA clan LOS88_02060 IPR001940 Peptidase S1C LOS88_02060 IPR036034 PDZ superfamily LOS88_02070 IPR005654 ATPase, AFG1-like LOS88_02070 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02070 IPR030870 Cell division protein ZapE LOS88_02075 IPR023563 Ribosomal protein L13, conserved site LOS88_02075 IPR005823 Ribosomal protein L13, bacterial-type LOS88_02075 IPR005822 Ribosomal protein L13 LOS88_02075 IPR036899 Ribosomal protein L13 superfamily LOS88_02080 IPR020574 Ribosomal protein S9, conserved site LOS88_02080 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_02080 IPR000754 Ribosomal protein S9 LOS88_02080 IPR023035 Ribosomal protein S9, bacterial/plastid LOS88_02080 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_02085 IPR014349 Rieske iron-sulphur protein LOS88_02085 IPR005805 Rieske iron-sulphur protein, C-terminal LOS88_02085 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal LOS88_02085 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit LOS88_02085 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LOS88_02085 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LOS88_02090 IPR016174 Di-haem cytochrome, transmembrane LOS88_02090 IPR030689 Cytochrome b LOS88_02090 IPR005797 Cytochrome b/b6, N-terminal LOS88_02090 IPR036150 Cytochrome b/b6, C-terminal domain superfamily LOS88_02090 IPR005798 Cytochrome b/b6, C-terminal LOS88_02090 IPR027387 Cytochrome b/b6-like domain superfamily LOS88_02095 IPR009056 Cytochrome c-like domain LOS88_02095 IPR036909 Cytochrome c-like domain superfamily LOS88_02095 IPR002326 Cytochrome c1 LOS88_02100 IPR036249 Thioredoxin-like superfamily LOS88_02100 IPR034341 Stringent starvation protein A, N-terminal LOS88_02100 IPR040079 Glutathione Transferase family LOS88_02100 IPR004045 Glutathione S-transferase, N-terminal LOS88_02100 IPR010987 Glutathione S-transferase, C-terminal-like LOS88_02100 IPR004046 Glutathione S-transferase, C-terminal LOS88_02100 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LOS88_02105 IPR007481 Stringent starvation protein B LOS88_02105 IPR036760 SspB-like superfamily LOS88_02110 IPR007055 BON domain LOS88_02110 IPR014004 Transport-associated and nodulation domain, bacteria LOS88_02115 IPR035461 GmhA/DiaA LOS88_02115 IPR004515 Phosphoheptose isomerase LOS88_02115 IPR001347 Sugar isomerase (SIS) LOS88_02120 IPR011335 Restriction endonuclease type II-like LOS88_02120 IPR011856 tRNA endonuclease-like domain superfamily LOS88_02120 IPR003509 Uncharacterised protein family UPF0102 LOS88_02125 IPR028082 Periplasmic binding protein-like I LOS88_02125 IPR007443 Penicillin-binding protein activator LpoA LOS88_02125 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_02130 IPR018063 SAM-dependent methyltransferase RsmI, conserved site LOS88_02130 IPR008189 rRNA small subunit methyltransferase I LOS88_02130 IPR000878 Tetrapyrrole methylase LOS88_02130 IPR014777 Tetrapyrrole methylase, subdomain 1 LOS88_02130 IPR014776 Tetrapyrrole methylase, subdomain 2 LOS88_02130 IPR035996 Tetrapyrrole methylase superfamily LOS88_02140 IPR003444 Transcriptional regulator MraZ LOS88_02140 IPR035644 MraZ, C-terminal LOS88_02140 IPR020603 MraZ domain LOS88_02140 IPR035642 MraZ, N-terminal LOS88_02140 IPR038619 MraZ superfamily LOS88_02140 IPR007159 SpoVT-AbrB domain LOS88_02140 IPR037914 SpoVT-AbrB domain superfamily LOS88_02145 IPR002903 Ribosomal RNA small subunit methyltransferase H LOS88_02145 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily LOS88_02145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_02150 IPR011922 Cell division protein FtsL LOS88_02155 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LOS88_02155 IPR001460 Penicillin-binding protein, transpeptidase LOS88_02155 IPR012338 Beta-lactamase/transpeptidase-like LOS88_02155 IPR005311 Penicillin-binding protein, dimerisation domain LOS88_02155 IPR037532 Peptidoglycan D,D-transpeptidase FtsI LOS88_02160 IPR036615 Mur ligase, C-terminal domain superfamily LOS88_02160 IPR013221 Mur ligase, central LOS88_02160 IPR000713 Mur ligase, N-terminal catalytic domain LOS88_02160 IPR035911 MurE/MurF, N-terminal LOS88_02160 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase LOS88_02160 IPR036565 Mur-like, catalytic domain superfamily LOS88_02160 IPR004101 Mur ligase, C-terminal LOS88_02165 IPR004101 Mur ligase, C-terminal LOS88_02165 IPR036615 Mur ligase, C-terminal domain superfamily LOS88_02165 IPR013221 Mur ligase, central LOS88_02165 IPR000713 Mur ligase, N-terminal catalytic domain LOS88_02165 IPR035911 MurE/MurF, N-terminal LOS88_02165 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase LOS88_02165 IPR036565 Mur-like, catalytic domain superfamily LOS88_02170 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase LOS88_02170 IPR000715 Glycosyl transferase, family 4 LOS88_02170 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site LOS88_02175 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase LOS88_02175 IPR036615 Mur ligase, C-terminal domain superfamily LOS88_02175 IPR036565 Mur-like, catalytic domain superfamily LOS88_02175 IPR004101 Mur ligase, C-terminal LOS88_02175 IPR013221 Mur ligase, central LOS88_02180 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LOS88_02180 IPR013437 Probable peptidoglycan glycosyltransferase FtsW LOS88_02180 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LOS88_02185 IPR004276 Glycosyltransferase family 28, N-terminal domain LOS88_02185 IPR006009 N-acetylglucosaminyltransferase, MurG LOS88_02185 IPR007235 Glycosyl transferase, family 28, C-terminal LOS88_02190 IPR013221 Mur ligase, central LOS88_02190 IPR036615 Mur ligase, C-terminal domain superfamily LOS88_02190 IPR005758 UDP-N-acetylmuramate--L-alanine ligase LOS88_02190 IPR000713 Mur ligase, N-terminal catalytic domain LOS88_02190 IPR004101 Mur ligase, C-terminal LOS88_02190 IPR036565 Mur-like, catalytic domain superfamily LOS88_02195 IPR005548 Cell division protein FtsQ/DivIB LOS88_02195 IPR026579 Cell division protein FtsQ LOS88_02195 IPR034746 POTRA domain LOS88_02195 IPR013685 POTRA domain, FtsQ-type LOS88_02200 IPR020823 Cell division protein FtsA LOS88_02200 IPR003494 SHS2 domain inserted in FtsA LOS88_02205 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LOS88_02205 IPR008280 Tubulin/FtsZ, C-terminal LOS88_02205 IPR024757 Cell division protein FtsZ, C-terminal LOS88_02205 IPR020805 Cell division protein FtsZ, conserved site LOS88_02205 IPR036525 Tubulin/FtsZ, GTPase domain superfamily LOS88_02205 IPR000158 Cell division protein FtsZ LOS88_02205 IPR003008 Tubulin/FtsZ, GTPase domain LOS88_02210 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_02210 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal LOS88_02210 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal LOS88_02210 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase LOS88_02220 IPR011116 SecA Wing/Scaffold LOS88_02220 IPR036266 SecA, Wing/Scaffold superfamily LOS88_02220 IPR036670 SecA, preprotein cross-linking domain superfamily LOS88_02220 IPR011130 SecA, preprotein cross-linking domain LOS88_02220 IPR014018 SecA motor DEAD LOS88_02220 IPR011115 SecA DEAD-like, N-terminal LOS88_02220 IPR004027 SEC-C motif LOS88_02220 IPR000185 Protein translocase subunit SecA LOS88_02220 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02220 IPR020937 SecA conserved site LOS88_02230 IPR022927 RNA pyrophosphohydrolase RppH LOS88_02230 IPR020476 NUDIX hydrolase LOS88_02230 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_02230 IPR020084 NUDIX hydrolase, conserved site LOS88_02230 IPR000086 NUDIX hydrolase domain LOS88_02235 IPR013088 Zinc finger, NHR/GATA-type LOS88_02235 IPR005584 DNA gyrase inhibitor YacG LOS88_02240 IPR009777 Cell division protein ZapD LOS88_02240 IPR036268 ZapD domain superfamily LOS88_02240 IPR027462 Z ring-associated protein D, C-terminal LOS88_02245 IPR001977 Dephospho-CoA kinase LOS88_02245 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02250 IPR010627 Peptidase A24A, N-terminal LOS88_02250 IPR014032 Peptidase A24A, prepilin type IV, bacterial LOS88_02250 IPR000045 Prepilin type IV endopeptidase, peptidase domain LOS88_02255 IPR001992 Type II secretion system conserved site LOS88_02255 IPR003004 GspF/PilC family LOS88_02255 IPR042094 Type II secretion system F domain superfamily LOS88_02255 IPR018076 Type II secretion system F domain LOS88_02260 IPR042181 Type II secretion system, protein E, N-terminal LOS88_02260 IPR013374 ATPase, type IV, pilus assembly, PilB LOS88_02260 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02260 IPR001482 Type II/IV secretion system protein LOS88_02260 IPR037257 General secretory system II, protein E, N-terminal superfamily LOS88_02260 IPR007831 General secretory system II, protein E, N-terminal LOS88_02270 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal LOS88_02270 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal LOS88_02270 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily LOS88_02270 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal LOS88_02270 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD LOS88_02270 IPR013785 Aldolase-type TIM barrel LOS88_02270 IPR004393 Nicotinate-nucleotide pyrophosphorylase LOS88_02280 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LOS88_02280 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LOS88_02285 IPR011711 GntR, C-terminal LOS88_02285 IPR008920 Transcription regulator FadR/GntR, C-terminal LOS88_02285 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_02285 IPR000524 Transcription regulator HTH, GntR LOS88_02285 IPR036390 Winged helix DNA-binding domain superfamily LOS88_02290 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LOS88_02290 IPR029061 Thiamin diphosphate-binding fold LOS88_02290 IPR005474 Transketolase, N-terminal LOS88_02290 IPR041621 Pyruvate dehydrogenase E1 component, middle domain LOS88_02290 IPR004660 Pyruvate dehydrogenase E1 component LOS88_02290 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal LOS88_02295 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LOS88_02295 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LOS88_02295 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex LOS88_02295 IPR000089 Biotin/lipoyl attachment LOS88_02295 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LOS88_02295 IPR036625 E3-binding domain superfamily LOS88_02295 IPR004167 Peripheral subunit-binding domain LOS88_02295 IPR011053 Single hybrid motif LOS88_02300 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LOS88_02300 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOS88_02300 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LOS88_02300 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_02300 IPR023753 FAD/NAD(P)-binding domain LOS88_02300 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LOS88_02300 IPR006258 Dihydrolipoamide dehydrogenase LOS88_02305 IPR005330 MHYT domain LOS88_02305 IPR035919 EAL domain superfamily LOS88_02305 IPR000160 GGDEF domain LOS88_02305 IPR029787 Nucleotide cyclase LOS88_02305 IPR001633 EAL domain LOS88_02310 IPR004090 Chemotaxis methyl-accepting receptor LOS88_02310 IPR003660 HAMP domain LOS88_02310 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_02310 IPR000727 Target SNARE coiled-coil homology domain LOS88_02310 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_02315 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LOS88_02315 IPR001423 Lysophospholipase patatin, conserved site LOS88_02315 IPR002641 Patatin-like phospholipase domain LOS88_02320 IPR015933 Aconitase B, HEAT-like domain LOS88_02320 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LOS88_02320 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LOS88_02320 IPR036008 Aconitase, iron-sulfur domain LOS88_02320 IPR018136 Aconitase family, 4Fe-4S cluster binding site LOS88_02320 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LOS88_02320 IPR036288 Aconitase B, HEAT-like domain superfamily LOS88_02320 IPR015929 Aconitase B, swivel LOS88_02320 IPR015932 Aconitase, domain 2 LOS88_02320 IPR004406 Aconitase B LOS88_02325 IPR001633 EAL domain LOS88_02325 IPR035919 EAL domain superfamily LOS88_02325 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LOS88_02335 IPR036627 CobW-like, C-terminal domain superfamily LOS88_02335 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02335 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LOS88_02335 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LOS88_02340 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_02340 IPR001036 Acriflavin resistance protein LOS88_02340 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA LOS88_02355 IPR004638 Drug resistance transporter EmrB-like LOS88_02355 IPR023721 Multidrug resistance protein MdtD LOS88_02355 IPR036259 MFS transporter superfamily LOS88_02355 IPR020846 Major facilitator superfamily domain LOS88_02355 IPR011701 Major facilitator superfamily LOS88_02365 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK LOS88_02365 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily LOS88_02370 IPR006156 Dihydroneopterin aldolase LOS88_02370 IPR006157 Dihydroneopterin aldolase/epimerase domain LOS88_02375 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY LOS88_02400 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_02415 IPR009049 Argininosuccinate lyase LOS88_02415 IPR029419 Argininosuccinate lyase, C-terminal LOS88_02415 IPR024083 Fumarase/histidase, N-terminal LOS88_02415 IPR020557 Fumarate lyase, conserved site LOS88_02415 IPR000362 Fumarate lyase family LOS88_02415 IPR022761 Fumarate lyase, N-terminal LOS88_02415 IPR008948 L-Aspartase-like LOS88_02420 IPR018223 Argininosuccinate synthase, conserved site LOS88_02420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_02420 IPR023434 Argininosuccinate synthase, type 1 subfamily LOS88_02420 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body LOS88_02420 IPR001518 Argininosuccinate synthase LOS88_02425 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LOS88_02425 IPR002292 Ornithine/putrescine carbamoyltransferase LOS88_02425 IPR024904 Ornithine carbamoyltransferase LOS88_02425 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LOS88_02425 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LOS88_02425 IPR006130 Aspartate/ornithine carbamoyltransferase LOS88_02430 IPR037528 Acetylglutamate kinase ArgB LOS88_02430 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_02430 IPR036393 Acetylglutamate kinase-like superfamily LOS88_02430 IPR004662 Acetylglutamate kinase family LOS88_02435 IPR000534 Semialdehyde dehydrogenase, NAD-binding LOS88_02435 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site LOS88_02435 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LOS88_02435 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 LOS88_02435 IPR036291 NAD(P)-binding domain superfamily LOS88_02440 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LOS88_02440 IPR010169 Acetylornithine deacetylase ArgE LOS88_02440 IPR002933 Peptidase M20 LOS88_02440 IPR011650 Peptidase M20, dimerisation domain LOS88_02440 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_02445 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_02445 IPR033129 Phosphoenolpyruvate carboxylase, His active site LOS88_02445 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site LOS88_02445 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type LOS88_02445 IPR021135 Phosphoenolpyruvate carboxylase LOS88_02450 IPR011004 Trimeric LpxA-like superfamily LOS88_02450 IPR018357 Hexapeptide transferase, conserved site LOS88_02450 IPR001451 Hexapeptide repeat LOS88_02460 IPR029787 Nucleotide cyclase LOS88_02460 IPR000160 GGDEF domain LOS88_02460 IPR033416 Periplasmic sensor domain CHASE7 LOS88_02465 IPR004694 Hydroxy amino acid transporter LOS88_02470 IPR010331 Exopolysaccharide synthesis, ExoD LOS88_02480 IPR000160 GGDEF domain LOS88_02480 IPR029787 Nucleotide cyclase LOS88_02485 IPR029020 Ammonium/urea transporter LOS88_02485 IPR001905 Ammonium transporter LOS88_02485 IPR018047 Ammonium transporter, conserved site LOS88_02485 IPR024041 Ammonium transporter AmtB-like domain LOS88_02490 IPR008816 Glycine zipper 2TM domain LOS88_02495 IPR023072 Acetyltransferase, YpeA LOS88_02495 IPR016181 Acyl-CoA N-acyltransferase LOS88_02495 IPR000182 GNAT domain LOS88_02500 IPR020483 Uncharacterised protein family YgbA LOS88_02505 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LOS88_02505 IPR036005 Creatinase/aminopeptidase-like LOS88_02505 IPR000587 Creatinase, N-terminal LOS88_02505 IPR000994 Peptidase M24 LOS88_02505 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LOS88_02510 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_02510 IPR000524 Transcription regulator HTH, GntR LOS88_02510 IPR008920 Transcription regulator FadR/GntR, C-terminal LOS88_02510 IPR036390 Winged helix DNA-binding domain superfamily LOS88_02515 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site LOS88_02515 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal LOS88_02515 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal LOS88_02515 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising LOS88_02520 IPR000397 Heat shock protein Hsp33 LOS88_02520 IPR016154 Heat shock protein Hsp33, C-terminal LOS88_02520 IPR016153 Heat shock protein Hsp33, N-terminal LOS88_02520 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily LOS88_02525 IPR036986 RNA-binding S4 domain superfamily LOS88_02525 IPR025708 Heat shock protein 15 LOS88_02525 IPR002942 RNA-binding S4 domain LOS88_02535 IPR000086 NUDIX hydrolase domain LOS88_02535 IPR020084 NUDIX hydrolase, conserved site LOS88_02535 IPR020476 NUDIX hydrolase LOS88_02535 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_02540 IPR002549 Transmembrane protein TqsA-like LOS88_02570 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LOS88_02570 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LOS88_02570 IPR016205 Glycerol dehydrogenase LOS88_02575 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LOS88_02575 IPR004701 Phosphotransferase system, mannose-type IIA component LOS88_02575 IPR008731 Phosphotransferase system, enzyme I N-terminal LOS88_02575 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily LOS88_02575 IPR036637 Phosphohistidine domain superfamily LOS88_02575 IPR036618 PtsI, HPr-binding domain superfamily LOS88_02575 IPR035895 HPr-like superfamily LOS88_02575 IPR000032 Phosphocarrier protein HPr-like LOS88_02575 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain LOS88_02575 IPR039643 Dihydroxyacetone kinase phosphotransferase subunit DhaM LOS88_02575 IPR008279 PEP-utilising enzyme, mobile domain LOS88_02580 IPR012737 Dihydroxyacetone kinase, subunit L LOS88_02580 IPR004007 DhaL domain LOS88_02580 IPR036117 DhaL domain superfamily LOS88_02585 IPR004006 DhaK domain LOS88_02585 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 LOS88_02590 IPR006043 Xanthine/uracil/vitamin C permease LOS88_02595 IPR012340 Nucleic acid-binding, OB-fold LOS88_02595 IPR019844 Cold-shock (CSD) domain LOS88_02595 IPR011129 Cold shock domain LOS88_02595 IPR012156 Cold shock, CspA LOS88_02595 IPR002059 Cold-shock protein, DNA-binding LOS88_02600 IPR032806 H repeat-associated protein, N-terminal LOS88_02600 IPR002559 Transposase, IS4-like LOS88_02610 IPR027470 Cation efflux protein, cytoplasmic domain LOS88_02610 IPR023783 Cation efflux pump FieF LOS88_02610 IPR002524 Cation efflux protein LOS88_02610 IPR027469 Cation efflux transmembrane domain superfamily LOS88_02610 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LOS88_02620 IPR000424 Primosome PriB/single-strand DNA-binding LOS88_02620 IPR011344 Single-stranded DNA-binding protein LOS88_02620 IPR012340 Nucleic acid-binding, OB-fold LOS88_02625 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_02625 IPR000792 Transcription regulator LuxR, C-terminal LOS88_02625 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_02630 IPR018900 Curli assembly protein CsgE LOS88_02640 IPR005534 Curli production assembly/transport component CsgG LOS88_02660 IPR041102 UvrA, interaction domain LOS88_02660 IPR041552 UvrA DNA-binding domain LOS88_02660 IPR004602 UvrABC system subunit A LOS88_02660 IPR003439 ABC transporter-like LOS88_02660 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02660 IPR017871 ABC transporter, conserved site LOS88_02665 IPR000160 GGDEF domain LOS88_02665 IPR029787 Nucleotide cyclase LOS88_02665 IPR000014 PAS domain LOS88_02665 IPR000700 PAS-associated, C-terminal LOS88_02665 IPR035965 PAS domain superfamily LOS88_02665 IPR013656 PAS fold-4 LOS88_02670 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LOS88_02670 IPR005618 Outer membrane protein, OmpW LOS88_02675 IPR003660 HAMP domain LOS88_02675 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_02690 IPR004620 5,10-methylenetetrahydrofolate reductase LOS88_02690 IPR029041 FAD-linked oxidoreductase-like LOS88_02690 IPR003171 Methylenetetrahydrofolate reductase LOS88_02700 IPR004711 Benzoate transporter LOS88_02705 IPR001387 Cro/C1-type helix-turn-helix domain LOS88_02705 IPR013096 Cupin 2, conserved barrel LOS88_02705 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_02705 IPR014710 RmlC-like jelly roll fold LOS88_02705 IPR011051 RmlC-like cupin domain superfamily LOS88_02740 IPR007458 Protein of unknown function DUF496 LOS88_02750 IPR006379 HAD-superfamily hydrolase, subfamily IIB LOS88_02750 IPR023214 HAD superfamily LOS88_02750 IPR000150 Cof family LOS88_02750 IPR036412 HAD-like superfamily LOS88_02760 IPR036653 CinA-like, C-terminal LOS88_02760 IPR008136 CinA, C-terminal LOS88_02760 IPR008135 Competence-induced protein CinA LOS88_02760 IPR036425 MoaB/Mog-like domain superfamily LOS88_02760 IPR001453 MoaB/Mog domain LOS88_02770 IPR033752 MetA family LOS88_02770 IPR029062 Class I glutamine amidotransferase-like LOS88_02770 IPR005697 Homoserine O-succinyltransferase MetA LOS88_02780 IPR036390 Winged helix DNA-binding domain superfamily LOS88_02780 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_02780 IPR019888 Transcription regulator AsnC-type LOS88_02780 IPR011008 Dimeric alpha-beta barrel LOS88_02780 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LOS88_02780 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LOS88_02780 IPR000485 AsnC-type HTH domain LOS88_02785 IPR012160 Lipoteichoic acid synthase-like LOS88_02785 IPR000917 Sulfatase, N-terminal LOS88_02785 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_02805 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain LOS88_02805 IPR013783 Immunoglobulin-like fold LOS88_02805 IPR032091 Maltogenic Amylase, C-terminal LOS88_02805 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_02805 IPR017853 Glycoside hydrolase superfamily LOS88_02805 IPR013780 Glycosyl hydrolase, all-beta LOS88_02825 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_02825 IPR036291 NAD(P)-binding domain superfamily LOS88_02825 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_02830 IPR005322 Peptidase C69, dipeptidase A LOS88_02840 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LOS88_02840 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LOS88_02845 IPR018148 Methylglyoxal synthase, active site LOS88_02845 IPR011607 Methylglyoxal synthase-like domain LOS88_02845 IPR036914 Methylglyoxal synthase-like domain superfamily LOS88_02845 IPR004363 Methylglyoxal synthase LOS88_02850 IPR009040 Ferritin-like diiron domain LOS88_02850 IPR009078 Ferritin-like superfamily LOS88_02850 IPR012347 Ferritin-like LOS88_02850 IPR002024 Bacterioferritin LOS88_02850 IPR008331 Ferritin/DPS protein domain LOS88_02865 IPR000182 GNAT domain LOS88_02865 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02865 IPR032672 TmcA/NAT10/Kre33 LOS88_02865 IPR038321 TmcA, C-terminal domain superfamily LOS88_02865 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal LOS88_02865 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain LOS88_02865 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA LOS88_02865 IPR016181 Acyl-CoA N-acyltransferase LOS88_02865 IPR007807 Helicase domain LOS88_02870 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_02870 IPR036291 NAD(P)-binding domain superfamily LOS88_02870 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_02875 IPR002545 CheW-like domain LOS88_02875 IPR011006 CheY-like superfamily LOS88_02875 IPR001789 Signal transduction response regulator, receiver domain LOS88_02875 IPR036061 CheW-like domain superfamily LOS88_02875 IPR024181 Chemotaxis response regulator CheV LOS88_02885 IPR001189 Manganese/iron superoxide dismutase LOS88_02885 IPR019833 Manganese/iron superoxide dismutase, binding site LOS88_02885 IPR019832 Manganese/iron superoxide dismutase, C-terminal LOS88_02885 IPR019831 Manganese/iron superoxide dismutase, N-terminal LOS88_02885 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily LOS88_02885 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily LOS88_02890 IPR003848 Domain of unknown function DUF218 LOS88_02895 IPR022409 PKD/Chitinase domain LOS88_02895 IPR035986 PKD domain superfamily LOS88_02895 IPR013661 Peptidase M9, collagenase, N-terminal domain LOS88_02895 IPR002169 Peptidase M9A/M9B, collagenase, bacterial LOS88_02895 IPR000601 PKD domain LOS88_02895 IPR013783 Immunoglobulin-like fold LOS88_02900 IPR000873 AMP-dependent synthetase/ligase LOS88_02900 IPR042099 AMP-dependent synthetase-like superfamily LOS88_02900 IPR010192 2-succinylbenzoate--CoA ligase LOS88_02900 IPR020845 AMP-binding, conserved site LOS88_02905 IPR036849 Enolase-like, C-terminal domain superfamily LOS88_02905 IPR029017 Enolase-like, N-terminal LOS88_02905 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LOS88_02905 IPR010196 o-Succinylbenzoate synthase, MenC type1 LOS88_02905 IPR029065 Enolase C-terminal domain-like LOS88_02910 IPR029045 ClpP/crotonase-like domain superfamily LOS88_02910 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB LOS88_02910 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LOS88_02910 IPR001753 Enoyl-CoA hydratase/isomerase LOS88_02910 IPR014748 Enoyl-CoA hydratase, C-terminal LOS88_02915 IPR000073 Alpha/beta hydrolase fold-1 LOS88_02915 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase LOS88_02915 IPR029058 Alpha/Beta hydrolase fold LOS88_02920 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LOS88_02920 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase LOS88_02920 IPR029035 DHS-like NAD/FAD-binding domain superfamily LOS88_02920 IPR029061 Thiamin diphosphate-binding fold LOS88_02920 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LOS88_02920 IPR032264 Menaquinone biosynthesis protein MenD, middle domain LOS88_02925 IPR015890 Chorismate-utilising enzyme, C-terminal LOS88_02925 IPR004561 Isochorismate synthase LOS88_02925 IPR034681 Isochorismate synthase MenF LOS88_02925 IPR005801 ADC synthase LOS88_02930 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase LOS88_02930 IPR000537 UbiA prenyltransferase family LOS88_02930 IPR026046 UbiA prenyltransferase domain containing protein 1 LOS88_02955 IPR028619 ATP-dependent RNA helicase DbpA LOS88_02955 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain LOS88_02955 IPR011545 DEAD/DEAH box helicase domain LOS88_02955 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_02955 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_02955 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_02955 IPR001650 Helicase, C-terminal LOS88_02955 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LOS88_02955 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_02960 IPR002668 Concentrative nucleoside transporter N-terminal domain LOS88_02960 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_02960 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LOS88_02960 IPR008276 Concentrative nucleoside transporter LOS88_02960 IPR011657 Concentrative nucleoside transporter C-terminal domain LOS88_02965 IPR016956 Inner membrane protein YdjM LOS88_02965 IPR007404 LexA-binding, inner membrane-associated putative hydrolase LOS88_02970 IPR003791 Protein of unknown function UPF0178 LOS88_02975 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB LOS88_02975 IPR023714 Zinc transport protein ZntB LOS88_02990 IPR001305 Heat shock protein DnaJ, cysteine-rich domain LOS88_02990 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily LOS88_02990 IPR008971 HSP40/DnaJ peptide-binding LOS88_02990 IPR036869 Chaperone J-domain superfamily LOS88_02990 IPR002939 Chaperone DnaJ, C-terminal LOS88_02990 IPR012724 Chaperone DnaJ LOS88_02990 IPR001623 DnaJ domain LOS88_03000 IPR007761 Mannitol repressor MtlR-like LOS88_03000 IPR038026 MtlR-like superfamily LOS88_03005 IPR013131 Mannitol dehydrogenase, N-terminal LOS88_03005 IPR036291 NAD(P)-binding domain superfamily LOS88_03005 IPR023027 Mannitol dehydrogenase, conserved site LOS88_03005 IPR013118 Mannitol dehydrogenase, C-terminal LOS88_03005 IPR023028 Mannitol-1-phosphate 5-dehydrogenase LOS88_03005 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LOS88_03005 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_03005 IPR000669 Mannitol dehydrogenase LOS88_03010 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LOS88_03010 IPR029503 Phosphotransferase system EIIB component, mannitol-specific LOS88_03010 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC LOS88_03010 IPR013011 Phosphotransferase system, EIIB component, type 2 LOS88_03010 IPR013014 Phosphotransferase system, EIIC component, type 2 LOS88_03010 IPR036095 PTS system IIB component-like superfamily LOS88_03010 IPR002178 PTS EIIA type-2 domain LOS88_03010 IPR016152 Phosphotransferase/anion transporter LOS88_03010 IPR003352 Phosphotransferase system, EIIC LOS88_03015 IPR004960 Bacterial lipid A biosynthesis acyltransferase LOS88_03015 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase LOS88_03020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_03020 IPR029056 Ribokinase-like LOS88_03020 IPR011913 RfaE bifunctional protein, domain I LOS88_03020 IPR023030 Bifunctional protein HldE LOS88_03020 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LOS88_03020 IPR011914 RfaE bifunctional protein, domain II LOS88_03020 IPR011611 Carbohydrate kinase PfkB LOS88_03020 IPR004821 Cytidyltransferase-like domain LOS88_03025 IPR003423 Outer membrane efflux protein LOS88_03025 IPR010130 Type I secretion outer membrane protein, TolC LOS88_03030 IPR004385 Nucleoside diphosphate pyrophosphatase LOS88_03030 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_03030 IPR000086 NUDIX hydrolase domain LOS88_03030 IPR020084 NUDIX hydrolase, conserved site LOS88_03035 IPR009659 Protein of unknown function DUF1249 LOS88_03040 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LOS88_03040 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA LOS88_03040 IPR029052 Metallo-dependent phosphatase-like LOS88_03045 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LOS88_03045 IPR029058 Alpha/Beta hydrolase fold LOS88_03050 IPR000086 NUDIX hydrolase domain LOS88_03050 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_03055 IPR012451 Protein of unknown function DUF1656 LOS88_03060 IPR006143 RND efflux pump, membrane fusion protein LOS88_03060 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_03065 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein LOS88_03070 IPR002288 DNA gyrase B subunit, C-terminal LOS88_03070 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_03070 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_03070 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_03070 IPR006171 TOPRIM domain LOS88_03070 IPR001241 DNA topoisomerase, type IIA LOS88_03070 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LOS88_03070 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal LOS88_03070 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 LOS88_03070 IPR018522 DNA topoisomerase, type IIA, conserved site LOS88_03070 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative LOS88_03070 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_03075 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily LOS88_03075 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative LOS88_03075 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta LOS88_03075 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat LOS88_03075 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LOS88_03075 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal LOS88_03075 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal LOS88_03085 IPR002559 Transposase, IS4-like LOS88_03085 IPR032806 H repeat-associated protein, N-terminal LOS88_03090 IPR000109 Proton-dependent oligopeptide transporter family LOS88_03090 IPR036259 MFS transporter superfamily LOS88_03090 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B LOS88_03090 IPR005279 Dipeptide/tripeptide permease LOS88_03090 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site LOS88_03110 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily LOS88_03110 IPR001305 Heat shock protein DnaJ, cysteine-rich domain LOS88_03110 IPR008971 HSP40/DnaJ peptide-binding LOS88_03110 IPR018253 DnaJ domain, conserved site LOS88_03110 IPR036869 Chaperone J-domain superfamily LOS88_03110 IPR002939 Chaperone DnaJ, C-terminal LOS88_03110 IPR012724 Chaperone DnaJ LOS88_03110 IPR001623 DnaJ domain LOS88_03115 IPR036291 NAD(P)-binding domain superfamily LOS88_03115 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_03115 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_03125 IPR036390 Winged helix DNA-binding domain superfamily LOS88_03125 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_03125 IPR000847 Transcription regulator HTH, LysR LOS88_03125 IPR005119 LysR, substrate-binding LOS88_03130 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LOS88_03130 IPR036249 Thioredoxin-like superfamily LOS88_03130 IPR017937 Thioredoxin, conserved site LOS88_03130 IPR013766 Thioredoxin domain LOS88_03150 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase LOS88_03150 IPR002123 Phospholipid/glycerol acyltransferase LOS88_03155 IPR014319 Phage shock protein, PspA LOS88_03155 IPR007157 PspA/IM30 LOS88_03170 IPR035901 GIY-YIG endonuclease superfamily LOS88_03170 IPR000305 GIY-YIG endonuclease LOS88_03170 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease LOS88_03180 IPR000620 EamA domain LOS88_03180 IPR004626 RarD protein LOS88_03185 IPR005122 Uracil-DNA glycosylase-like LOS88_03185 IPR036895 Uracil-DNA glycosylase-like domain superfamily LOS88_03190 IPR000620 EamA domain LOS88_03195 IPR005119 LysR, substrate-binding LOS88_03195 IPR000847 Transcription regulator HTH, LysR LOS88_03195 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_03195 IPR036390 Winged helix DNA-binding domain superfamily LOS88_03200 IPR001626 ABC transporter, TroCD-like LOS88_03200 IPR037294 ABC transporter, BtuC-like LOS88_03205 IPR003439 ABC transporter-like LOS88_03205 IPR003593 AAA+ ATPase domain LOS88_03205 IPR017882 Zinc import ATP-binding protein ZnuC LOS88_03205 IPR017871 ABC transporter, conserved site LOS88_03205 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_03210 IPR006128 Adhesion lipoprotein LOS88_03210 IPR035520 High-affinity zinc uptake system protein ZnuA LOS88_03210 IPR006127 Periplasmic solute binding protein, ZnuA-like LOS88_03220 IPR036397 Ribonuclease H superfamily LOS88_03220 IPR009057 Homeobox-like domain superfamily LOS88_03220 IPR001584 Integrase, catalytic core LOS88_03220 IPR012337 Ribonuclease H-like superfamily LOS88_03220 IPR001598 Transposase, IS30, conserved site LOS88_03240 IPR011055 Duplicated hybrid motif LOS88_03240 IPR018392 LysM domain LOS88_03240 IPR013731 Opacity-associated protein A, N-terminal LOS88_03240 IPR016047 Peptidase M23 LOS88_03245 IPR036291 NAD(P)-binding domain superfamily LOS88_03245 IPR023514 Glyoxylate/hydroxypyruvate reductase A LOS88_03245 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LOS88_03250 IPR007338 Protein of unknown function DUF416 LOS88_03250 IPR023381 YP001051499.1-like domain superfamily LOS88_03265 IPR018093 BCCT transporter, conserved site LOS88_03265 IPR000060 BCCT transporter family LOS88_03270 IPR006674 HD domain LOS88_03270 IPR012006 tRNA nucleotidyltransferase, proteobacteria LOS88_03270 IPR003607 HD/PDEase domain LOS88_03270 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LOS88_03270 IPR002646 Poly A polymerase, head domain LOS88_03275 IPR005760 A/G-specific adenine glycosylase MutY LOS88_03275 IPR011257 DNA glycosylase LOS88_03275 IPR004036 Endonuclease III-like, conserved site-2 LOS88_03275 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif LOS88_03275 IPR004035 Endonuclease III, iron-sulphur binding site LOS88_03275 IPR003265 HhH-GPD domain LOS88_03275 IPR000445 Helix-hairpin-helix motif LOS88_03275 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LOS88_03275 IPR029119 MutY, C-terminal LOS88_03275 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_03280 IPR007457 Fe(II) trafficking protein YggX LOS88_03280 IPR036766 Fe(II) trafficking protein YggX superfamily LOS88_03285 IPR008258 Transglycosylase SLT domain 1 LOS88_03285 IPR000189 Prokaryotic transglycosylase, active site LOS88_03285 IPR024570 Murein transglycosylase-C, N-terminal LOS88_03285 IPR023664 Murein transglycosylase-C LOS88_03285 IPR023346 Lysozyme-like domain superfamily LOS88_03290 IPR005220 Bacterial OB-fold LOS88_03290 IPR016052 Bacteriophage 933W, L0136 LOS88_03290 IPR036700 Bacterial OB-fold superfamily LOS88_03295 IPR001087 GDSL lipase/esterase LOS88_03295 IPR008265 Lipase, GDSL, active site LOS88_03295 IPR036514 SGNH hydrolase superfamily LOS88_03300 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LOS88_03300 IPR006664 Outer membrane protein, bacterial LOS88_03300 IPR002368 Outer membrane protein, OmpA LOS88_03300 IPR006665 OmpA-like domain LOS88_03300 IPR006690 Outer membrane protein, OmpA-like, conserved site LOS88_03300 IPR036737 OmpA-like domain superfamily LOS88_03300 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LOS88_03305 IPR000160 GGDEF domain LOS88_03305 IPR029787 Nucleotide cyclase LOS88_03310 IPR011129 Cold shock domain LOS88_03310 IPR040476 RNase II/RNase R, cold shock domain LOS88_03310 IPR012340 Nucleic acid-binding, OB-fold LOS88_03310 IPR013223 Ribonuclease B, N-terminal OB domain LOS88_03310 IPR001900 Ribonuclease II/R LOS88_03310 IPR022966 Ribonuclease II/R, conserved site LOS88_03310 IPR004476 Ribonuclease II/ribonuclease R LOS88_03310 IPR011805 Ribonuclease R LOS88_03310 IPR013668 Ribonuclease R winged-helix domain LOS88_03310 IPR022967 RNA-binding domain, S1 LOS88_03310 IPR003029 S1 domain LOS88_03315 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LOS88_03315 IPR013123 RNA 2-O ribose methyltransferase, substrate binding LOS88_03315 IPR001537 tRNA/rRNA methyltransferase, SpoU type LOS88_03315 IPR004441 RNA methyltransferase TrmH family LOS88_03315 IPR029028 Alpha/beta knot methyltransferases LOS88_03315 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB LOS88_03315 IPR029064 50S ribosomal protein L30e-like LOS88_03325 IPR016181 Acyl-CoA N-acyltransferase LOS88_03325 IPR000182 GNAT domain LOS88_03330 IPR011545 DEAD/DEAH box helicase domain LOS88_03330 IPR028621 ATP-dependent RNA helicase SrmB LOS88_03330 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_03330 IPR001650 Helicase, C-terminal LOS88_03330 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_03330 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_03330 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_03335 IPR007848 Methyltransferase small domain LOS88_03335 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase LOS88_03335 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_03335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_03340 IPR004685 Branched-chain amino acid transport system II carrier protein LOS88_03345 IPR004685 Branched-chain amino acid transport system II carrier protein LOS88_03360 IPR002481 Ferric-uptake regulator LOS88_03360 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_03360 IPR036390 Winged helix DNA-binding domain superfamily LOS88_03365 IPR013785 Aldolase-type TIM barrel LOS88_03365 IPR035587 DUS-like, FMN-binding domain LOS88_03365 IPR004653 tRNA-dihydrouridine(20/20a) synthase LOS88_03365 IPR001269 tRNA-dihydrouridine synthase LOS88_03365 IPR018517 tRNA-dihydrouridine synthase, conserved site LOS88_03380 IPR000914 Solute-binding protein family 5 domain LOS88_03380 IPR023765 Solute-binding protein family 5, conserved site LOS88_03380 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_03380 IPR039424 Solute-binding protein family 5 LOS88_03390 IPR001451 Hexapeptide repeat LOS88_03390 IPR018357 Hexapeptide transferase, conserved site LOS88_03390 IPR011004 Trimeric LpxA-like superfamily LOS88_03395 IPR020206 Uncharacterised protein family, VP2110 LOS88_03400 IPR029045 ClpP/crotonase-like domain superfamily LOS88_03400 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LOS88_03400 IPR001753 Enoyl-CoA hydratase/isomerase LOS88_03400 IPR014748 Enoyl-CoA hydratase, C-terminal LOS88_03415 IPR036291 NAD(P)-binding domain superfamily LOS88_03415 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_03420 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain LOS88_03420 IPR033730 Prokaryote proline-tRNA ligase core domain LOS88_03420 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily LOS88_03420 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type LOS88_03420 IPR002316 Proline-tRNA ligase, class IIa LOS88_03420 IPR036621 Anticodon-binding domain superfamily LOS88_03420 IPR004154 Anticodon-binding LOS88_03420 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 LOS88_03420 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_03420 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LOS88_03425 IPR030390 RNA methyltransferase TrmA, active site LOS88_03425 IPR030391 RNA methyltransferase TrmA, conserved site LOS88_03425 IPR012340 Nucleic acid-binding, OB-fold LOS88_03425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_03425 IPR002792 TRAM domain LOS88_03425 IPR010280 (Uracil-5)-methyltransferase family LOS88_03435 IPR003399 Mce/MlaD LOS88_03440 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type LOS88_03440 IPR007498 Intermembrane transport protein PqiA-like LOS88_03445 IPR005001 RNA-binding protein Hfq LOS88_03445 IPR010920 LSM domain superfamily LOS88_03450 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_03450 IPR006439 HAD hydrolase, subfamily IA LOS88_03450 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_03450 IPR036412 HAD-like superfamily LOS88_03450 IPR010976 Beta-phosphoglucomutase hydrolase LOS88_03450 IPR023214 HAD superfamily LOS88_03460 IPR001633 EAL domain LOS88_03460 IPR035919 EAL domain superfamily LOS88_03460 IPR003018 GAF domain LOS88_03460 IPR029016 GAF-like domain superfamily LOS88_03460 IPR000160 GGDEF domain LOS88_03460 IPR029787 Nucleotide cyclase LOS88_03460 IPR016132 Phytochrome chromophore attachment domain LOS88_03460 IPR001294 Phytochrome LOS88_03460 IPR013515 Phytochrome, central region LOS88_03465 IPR011129 Cold shock domain LOS88_03465 IPR040476 RNase II/RNase R, cold shock domain LOS88_03465 IPR012340 Nucleic acid-binding, OB-fold LOS88_03465 IPR013223 Ribonuclease B, N-terminal OB domain LOS88_03465 IPR011804 Ribonuclease II LOS88_03465 IPR001900 Ribonuclease II/R LOS88_03465 IPR022966 Ribonuclease II/R, conserved site LOS88_03465 IPR004476 Ribonuclease II/ribonuclease R LOS88_03470 IPR017685 HTH-type transcriptional regulator ArgP LOS88_03470 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria LOS88_03470 IPR005119 LysR, substrate-binding LOS88_03470 IPR000847 Transcription regulator HTH, LysR LOS88_03470 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_03470 IPR036390 Winged helix DNA-binding domain superfamily LOS88_03475 IPR018311 Autoinducer synthesis, conserved site LOS88_03475 IPR001690 Autoinducer synthase LOS88_03475 IPR016181 Acyl-CoA N-acyltransferase LOS88_03480 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_03480 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LOS88_03480 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily LOS88_03480 IPR000792 Transcription regulator LuxR, C-terminal LOS88_03480 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_03485 IPR004777 L-lysine exporter/arginine exporter LOS88_03485 IPR001123 Amino acid exporter protein, LeuE-type LOS88_03490 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_03490 IPR003660 HAMP domain LOS88_03495 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial LOS88_03495 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LOS88_03495 IPR012340 Nucleic acid-binding, OB-fold LOS88_03495 IPR010994 RuvA domain 2-like LOS88_03495 IPR011114 Holliday junction DNA helicase RuvA, C-terminal LOS88_03495 IPR036267 RuvA, C-terminal domain superfamily LOS88_03495 IPR000085 Bacterial DNA recombination protein RuvA LOS88_03500 IPR036390 Winged helix DNA-binding domain superfamily LOS88_03500 IPR003593 AAA+ ATPase domain LOS88_03500 IPR041445 RuvB, AAA lid domain LOS88_03500 IPR004605 DNA helicase, Holliday junction RuvB-type LOS88_03500 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_03500 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_03500 IPR008823 RuvB C-terminal winged helix domain LOS88_03500 IPR008824 RuvB-like P-loop domain LOS88_03505 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LOS88_03510 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LOS88_03515 IPR011724 Cyd operon protein YbgT LOS88_03515 IPR012994 Membrane bound YbgT-like LOS88_03520 IPR011846 Cyd operon protein YbgE LOS88_03525 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site LOS88_03525 IPR029069 HotDog domain superfamily LOS88_03525 IPR006683 Thioesterase domain LOS88_03525 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase LOS88_03525 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family LOS88_03530 IPR002898 MotA/TolQ/ExbB proton channel LOS88_03530 IPR014163 Tol-Pal system, TolQ LOS88_03535 IPR003400 Biopolymer transport protein ExbD/TolR LOS88_03535 IPR014168 Tol-Pal system protein TolR LOS88_03545 IPR036752 TolB, N-terminal domain superfamily LOS88_03545 IPR011042 Six-bladed beta-propeller, TolB-like LOS88_03545 IPR014167 Tol-Pal system protein TolB LOS88_03545 IPR007195 TolB, N-terminal LOS88_03545 IPR011659 WD40-like Beta Propeller LOS88_03550 IPR006690 Outer membrane protein, OmpA-like, conserved site LOS88_03550 IPR006664 Outer membrane protein, bacterial LOS88_03550 IPR006665 OmpA-like domain LOS88_03550 IPR036737 OmpA-like domain superfamily LOS88_03550 IPR039001 Peptidoglycan-associated lipoprotein LOS88_03550 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal LOS88_03555 IPR034706 Cell division coordinator CpoB LOS88_03555 IPR014162 Cell division coordinator CpoB, C-terminal LOS88_03555 IPR013026 Tetratricopeptide repeat-containing domain LOS88_03555 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_03555 IPR019734 Tetratricopeptide repeat LOS88_03555 IPR032519 YbgF, trimerisation domain LOS88_03620 IPR000175 Sodium:neurotransmitter symporter LOS88_03620 IPR037272 Sodium:neurotransmitter symporter superfamily LOS88_03630 IPR000175 Sodium:neurotransmitter symporter LOS88_03630 IPR037272 Sodium:neurotransmitter symporter superfamily LOS88_03645 IPR000150 Cof family LOS88_03645 IPR036412 HAD-like superfamily LOS88_03645 IPR006379 HAD-superfamily hydrolase, subfamily IIB LOS88_03645 IPR023214 HAD superfamily LOS88_03650 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LOS88_03650 IPR020846 Major facilitator superfamily domain LOS88_03650 IPR036259 MFS transporter superfamily LOS88_03650 IPR005829 Sugar transporter, conserved site LOS88_03650 IPR011701 Major facilitator superfamily LOS88_03660 IPR011991 ArsR-like helix-turn-helix domain LOS88_03660 IPR036390 Winged helix DNA-binding domain superfamily LOS88_03660 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_03660 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LOS88_03660 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LOS88_03660 IPR019888 Transcription regulator AsnC-type LOS88_03660 IPR011008 Dimeric alpha-beta barrel LOS88_03660 IPR000485 AsnC-type HTH domain LOS88_03675 IPR000086 NUDIX hydrolase domain LOS88_03675 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_03675 IPR020476 NUDIX hydrolase LOS88_03675 IPR022927 RNA pyrophosphohydrolase RppH LOS88_03675 IPR020084 NUDIX hydrolase, conserved site LOS88_03685 IPR028427 Peptide methionine sulfoxide reductase LOS88_03685 IPR002579 Peptide methionine sulphoxide reductase MrsB LOS88_03685 IPR011057 Mss4-like superfamily LOS88_03690 IPR004193 Glycoside hydrolase, family 13, N-terminal LOS88_03690 IPR013780 Glycosyl hydrolase, all-beta LOS88_03690 IPR011837 Glycogen debranching enzyme, GlgX type LOS88_03690 IPR017853 Glycoside hydrolase superfamily LOS88_03690 IPR013783 Immunoglobulin-like fold LOS88_03690 IPR014756 Immunoglobulin E-set LOS88_03690 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_03695 IPR014756 Immunoglobulin E-set LOS88_03695 IPR013783 Immunoglobulin-like fold LOS88_03695 IPR017853 Glycoside hydrolase superfamily LOS88_03695 IPR013780 Glycosyl hydrolase, all-beta LOS88_03695 IPR004193 Glycoside hydrolase, family 13, N-terminal LOS88_03695 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_03695 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB LOS88_03695 IPR037439 1,4-alpha-glucan-branching enzyme LOS88_03695 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta LOS88_03700 IPR003385 Glycoside hydrolase, family 77 LOS88_03700 IPR017853 Glycoside hydrolase superfamily LOS88_03705 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site LOS88_03705 IPR036291 NAD(P)-binding domain superfamily LOS88_03705 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LOS88_03705 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LOS88_03705 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I LOS88_03705 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LOS88_03710 IPR025532 Glucose-6-phosphate 1-epimerase LOS88_03710 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase LOS88_03710 IPR014718 Glycoside hydrolase-type carbohydrate-binding LOS88_03710 IPR011013 Galactose mutarotase-like domain superfamily LOS88_03715 IPR023513 Quinolinate synthase A, type 1 LOS88_03715 IPR036094 Quinolinate synthetase A superfamily LOS88_03715 IPR003473 Quinolinate synthetase A LOS88_03720 IPR003660 HAMP domain LOS88_03720 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_03725 IPR002810 NfeD-like, C-terminal domain LOS88_03730 IPR001972 Stomatin family LOS88_03730 IPR001107 Band 7 domain LOS88_03730 IPR032435 Band 7, C-terminal extension LOS88_03730 IPR036013 Band 7/SPFH domain superfamily LOS88_03730 IPR018080 Band 7/stomatin-like, conserved site LOS88_03735 IPR000878 Tetrapyrrole methylase LOS88_03735 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site LOS88_03735 IPR006367 Sirohaem synthase, N-terminal LOS88_03735 IPR019478 Sirohaem synthase, dimerisation domain LOS88_03735 IPR028281 Siroheme synthase, central domain LOS88_03735 IPR012409 Sirohaem synthase LOS88_03735 IPR035996 Tetrapyrrole methylase superfamily LOS88_03735 IPR037115 Sirohaem synthase, dimerisation domain superfamily LOS88_03735 IPR014777 Tetrapyrrole methylase, subdomain 1 LOS88_03735 IPR014776 Tetrapyrrole methylase, subdomain 2 LOS88_03735 IPR006366 Uroporphyrin-III C-methyltransferase LOS88_03735 IPR036291 NAD(P)-binding domain superfamily LOS88_03740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_03740 IPR011784 Sulphate adenylyltransferase, small subunit LOS88_03740 IPR002500 Phosphoadenosine phosphosulphate reductase LOS88_03745 IPR005225 Small GTP-binding protein domain LOS88_03745 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_03745 IPR031157 Tr-type G domain, conserved site LOS88_03745 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain LOS88_03745 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_03745 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LOS88_03745 IPR000795 Transcription factor, GTP-binding domain LOS88_03745 IPR011779 Sulphate adenylyltransferase, large subunit LOS88_03750 IPR004680 Citrate transporter-like domain LOS88_03750 IPR031312 Sodium/sulphate symporter, conserved site LOS88_03750 IPR006037 Regulator of K+ conductance, C-terminal LOS88_03750 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LOS88_03755 IPR002891 Adenylyl-sulfate kinase LOS88_03755 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_03780 IPR036397 Ribonuclease H superfamily LOS88_03780 IPR012337 Ribonuclease H-like superfamily LOS88_03780 IPR009057 Homeobox-like domain superfamily LOS88_03780 IPR001584 Integrase, catalytic core LOS88_03780 IPR001598 Transposase, IS30, conserved site LOS88_03785 IPR013655 PAS fold-3 LOS88_03785 IPR035965 PAS domain superfamily LOS88_03785 IPR000014 PAS domain LOS88_03785 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_03785 IPR003660 HAMP domain LOS88_03785 IPR004090 Chemotaxis methyl-accepting receptor LOS88_03785 IPR001610 PAC motif LOS88_03805 IPR003593 AAA+ ATPase domain LOS88_03805 IPR015854 ABC transporter, lipoprotein release, LolD LOS88_03805 IPR017871 ABC transporter, conserved site LOS88_03805 IPR011924 Lipoprotein releasing system, ATP-binding protein LOS88_03805 IPR003439 ABC transporter-like LOS88_03805 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_03820 IPR006513 Conserved hypothetical protein CHP01626, YtfJ LOS88_03835 IPR008162 Inorganic pyrophosphatase LOS88_03835 IPR036649 Inorganic pyrophosphatase superfamily LOS88_03840 IPR011006 CheY-like superfamily LOS88_03840 IPR021800 Domain of unknown function DUF3369 LOS88_03840 IPR003607 HD/PDEase domain LOS88_03840 IPR037522 HD-GYP domain LOS88_03840 IPR001789 Signal transduction response regulator, receiver domain LOS88_03850 IPR000390 Small multidrug resistance protein family LOS88_03850 IPR023740 Spermidine export protein MdtJ LOS88_03855 IPR000390 Small multidrug resistance protein family LOS88_03855 IPR023737 Spermidine export protein MdtI LOS88_03860 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LOS88_03860 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LOS88_03860 IPR037523 Vicinal oxygen chelate (VOC) domain LOS88_03860 IPR037478 YwkD-like domain LOS88_03865 IPR028166 Bifunctional transglycosylase second domain LOS88_03865 IPR012338 Beta-lactamase/transpeptidase-like LOS88_03865 IPR023346 Lysozyme-like domain superfamily LOS88_03865 IPR011813 Penicillin-binding protein 1B LOS88_03865 IPR036950 Penicillin binding protein transglycosylase domain LOS88_03865 IPR001460 Penicillin-binding protein, transpeptidase LOS88_03865 IPR001264 Glycosyl transferase, family 51 LOS88_03870 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_03870 IPR007502 Helicase-associated domain LOS88_03870 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal LOS88_03870 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_03870 IPR010225 ATP-dependent helicase HrpB LOS88_03870 IPR011545 DEAD/DEAH box helicase domain LOS88_03870 IPR001650 Helicase, C-terminal LOS88_03880 IPR041465 SfsA, N-terminal OB domain LOS88_03880 IPR040452 Sugar fermentation stimulation protein, C-terminal LOS88_03880 IPR005224 Sugar fermentation stimulation protein LOS88_03885 IPR037187 DksA, N-terminal domain superfamily LOS88_03885 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LOS88_03885 IPR000962 Zinc finger, DksA/TraR C4-type LOS88_03885 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LOS88_03885 IPR012784 RNA polymerase-binding transcription factor DksA LOS88_03890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_03890 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LOS88_03890 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LOS88_03890 IPR022380 Glutamyl-Q tRNA(Asp) synthetase LOS88_03895 IPR002646 Poly A polymerase, head domain LOS88_03895 IPR010206 Poly(A) polymerase I LOS88_03895 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LOS88_03895 IPR025866 Polymerase A arginine-rich C-terminal domain LOS88_03900 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK LOS88_03900 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily LOS88_03905 IPR003700 Ketopantoate hydroxymethyltransferase LOS88_03905 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_03905 IPR040442 Pyruvate kinase-like domain superfamily LOS88_03910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_03910 IPR004821 Cytidyltransferase-like domain LOS88_03910 IPR003721 Pantoate-beta-alanine ligase LOS88_03910 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain LOS88_03920 IPR036458 Sodium:dicarboxylate symporter superfamily LOS88_03920 IPR001991 Sodium:dicarboxylate symporter LOS88_03945 IPR000412 ABC-2 transporter LOS88_03945 IPR013525 ABC-2 type transporter LOS88_03950 IPR003593 AAA+ ATPase domain LOS88_03950 IPR003439 ABC transporter-like LOS88_03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_03950 IPR017871 ABC transporter, conserved site LOS88_03955 IPR005904 Hypoxanthine phosphoribosyl transferase LOS88_03955 IPR000836 Phosphoribosyltransferase domain LOS88_03955 IPR029057 Phosphoribosyltransferase-like LOS88_03960 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LOS88_03960 IPR001647 DNA-binding HTH domain, TetR-type LOS88_03960 IPR009057 Homeobox-like domain superfamily LOS88_03965 IPR036551 Flavin prenyltransferase-like LOS88_03965 IPR003382 Flavoprotein LOS88_03965 IPR004507 Flavin prenyltransferase UbiX-like LOS88_03970 IPR000713 Mur ligase, N-terminal catalytic domain LOS88_03970 IPR005757 Murein peptide ligase LOS88_03970 IPR036565 Mur-like, catalytic domain superfamily LOS88_03970 IPR004101 Mur ligase, C-terminal LOS88_03970 IPR036615 Mur ligase, C-terminal domain superfamily LOS88_03970 IPR013221 Mur ligase, central LOS88_03975 IPR032908 Lipid A 1-diphosphate synthase LOS88_03975 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LOS88_03975 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LOS88_03980 IPR005886 UDP-glucose 4-epimerase LOS88_03980 IPR001509 NAD-dependent epimerase/dehydratase LOS88_03980 IPR036291 NAD(P)-binding domain superfamily LOS88_03985 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LOS88_03985 IPR017938 Riboflavin synthase-like beta-barrel LOS88_03985 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_03985 IPR001433 Oxidoreductase FAD/NAD(P)-binding LOS88_03985 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LOS88_03985 IPR009050 Globin-like superfamily LOS88_03985 IPR012292 Globin/Protoglobin LOS88_03985 IPR023950 Flavohemoprotein LOS88_03985 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_03985 IPR000971 Globin LOS88_03990 IPR016100 Prismane, alpha-bundle LOS88_03990 IPR016099 Prismane-like, alpha/beta-sandwich LOS88_03990 IPR010048 Hydroxylamine reductase LOS88_03990 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase LOS88_03990 IPR011254 Prismane-like superfamily LOS88_03995 IPR009078 Ferritin-like superfamily LOS88_03995 IPR008331 Ferritin/DPS protein domain LOS88_03995 IPR002177 DNA-binding protein Dps LOS88_03995 IPR012347 Ferritin-like LOS88_03995 IPR023188 DNA-binding protein Dps, conserved site LOS88_04000 IPR036366 PGBD superfamily LOS88_04000 IPR036365 PGBD-like superfamily LOS88_04000 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LOS88_04000 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LOS88_04005 IPR009921 Domain of unknown function DUF1456 LOS88_04010 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_04010 IPR011006 CheY-like superfamily LOS88_04010 IPR003660 HAMP domain LOS88_04010 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_04010 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_04010 IPR005467 Histidine kinase domain LOS88_04010 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_04010 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_04010 IPR036641 HPT domain superfamily LOS88_04010 IPR019247 Histidine kinase BarA, N-terminal LOS88_04010 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_04010 IPR001789 Signal transduction response regulator, receiver domain LOS88_04015 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD LOS88_04015 IPR030390 RNA methyltransferase TrmA, active site LOS88_04015 IPR030391 RNA methyltransferase TrmA, conserved site LOS88_04015 IPR010280 (Uracil-5)-methyltransferase family LOS88_04015 IPR002792 TRAM domain LOS88_04015 IPR012340 Nucleic acid-binding, OB-fold LOS88_04015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_04020 IPR002912 ACT domain LOS88_04020 IPR012675 Beta-grasp domain superfamily LOS88_04020 IPR012676 TGS-like LOS88_04020 IPR004095 TGS LOS88_04020 IPR007685 RelA/SpoT LOS88_04020 IPR004811 RelA/SpoT family LOS88_04020 IPR003607 HD/PDEase domain LOS88_04020 IPR033655 RelA, TGS domain LOS88_04025 IPR011551 NTP pyrophosphohydrolase MazG LOS88_04025 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LOS88_04030 IPR029062 Class I glutamine amidotransferase-like LOS88_04030 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04030 IPR004468 CTP synthase LOS88_04030 IPR017926 Glutamine amidotransferase LOS88_04030 IPR033828 CTP synthase GATase domain LOS88_04030 IPR017456 CTP synthase, N-terminal LOS88_04035 IPR036849 Enolase-like, C-terminal domain superfamily LOS88_04035 IPR000941 Enolase LOS88_04035 IPR020811 Enolase, N-terminal LOS88_04035 IPR029017 Enolase-like, N-terminal LOS88_04035 IPR020810 Enolase, C-terminal TIM barrel domain LOS88_04035 IPR020809 Enolase, conserved site LOS88_04040 IPR029058 Alpha/Beta hydrolase fold LOS88_04040 IPR000073 Alpha/beta hydrolase fold-1 LOS88_04040 IPR000639 Epoxide hydrolase-like LOS88_04040 IPR016292 Epoxide hydrolase LOS88_04080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_04080 IPR007473 Ribosomal RNA large subunit methyltransferase J LOS88_04080 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_04090 IPR032781 ABC-transporter extension domain LOS88_04090 IPR003439 ABC transporter-like LOS88_04090 IPR017871 ABC transporter, conserved site LOS88_04090 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04090 IPR003593 AAA+ ATPase domain LOS88_04095 IPR000644 CBS domain LOS88_04095 IPR001667 DDH domain LOS88_04095 IPR038763 DHH phosphoesterase superfamily LOS88_04095 IPR002646 Poly A polymerase, head domain LOS88_04095 IPR003156 DHHA1 domain LOS88_04110 IPR004839 Aminotransferase, class I/classII LOS88_04110 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_04110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_04110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_04110 IPR000524 Transcription regulator HTH, GntR LOS88_04110 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_04110 IPR036390 Winged helix DNA-binding domain superfamily LOS88_04120 IPR001123 Amino acid exporter protein, LeuE-type LOS88_04125 IPR004380 Aspartate racemase LOS88_04125 IPR001920 Asp/Glu racemase LOS88_04125 IPR015942 Asp/Glu/hydantoin racemase LOS88_04125 IPR018187 Asp/Glu racemase, active site 1 LOS88_04125 IPR033134 Asp/Glu racemase, active site 2 LOS88_04135 IPR004375 YhcH/YjgK/YiaL family LOS88_04135 IPR037012 YhcH/YjgK/YiaL superfamily LOS88_04140 IPR004372 Acetate/propionate kinase LOS88_04140 IPR000890 Aliphatic acid kinase, short-chain LOS88_04140 IPR023865 Aliphatic acid kinase, short-chain, conserved site LOS88_04145 IPR011066 Mechanosensitive ion channel MscS, C-terminal LOS88_04145 IPR006685 Mechanosensitive ion channel MscS LOS88_04145 IPR010920 LSM domain superfamily LOS88_04145 IPR030192 Miniconductance mechanosensitive channel YbdG LOS88_04150 IPR005490 L,D-transpeptidase catalytic domain LOS88_04150 IPR041597 L,D-transpeptidase C-terminal domain LOS88_04150 IPR038063 L,D-transpeptidase catalytic domain-like LOS88_04160 IPR018212 Sodium/solute symporter, conserved site LOS88_04160 IPR038377 Sodium/glucose symporter superfamily LOS88_04160 IPR011851 Sodium/proline symporter LOS88_04160 IPR001734 Sodium/solute symporter LOS88_04165 IPR023081 Cell division protein FtsB LOS88_04165 IPR007060 Septum formation initiator FtsL/DivIC LOS88_04170 IPR034683 Cytidylyltransferase IspD/TarI LOS88_04170 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site LOS88_04170 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_04170 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LOS88_04175 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase LOS88_04175 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site LOS88_04175 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily LOS88_04180 IPR001656 Pseudouridine synthase, TruD LOS88_04180 IPR020119 Pseudouridine synthase TruD, conserved site LOS88_04180 IPR011760 Pseudouridine synthase, TruD, insertion domain LOS88_04180 IPR042214 Pseudouridine synthase, TruD, catalytic domain LOS88_04180 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_04185 IPR030048 Survival protein SurE LOS88_04185 IPR002828 Survival protein SurE-like phosphatase/nucleotidase LOS88_04185 IPR036523 SurE-like phosphatase/nucleotidase superfamily LOS88_04190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_04190 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase LOS88_04195 IPR032816 SNARE associated Golgi protein LOS88_04200 IPR011055 Duplicated hybrid motif LOS88_04200 IPR018392 LysM domain LOS88_04200 IPR016047 Peptidase M23 LOS88_04200 IPR036779 LysM domain superfamily LOS88_04205 IPR014284 RNA polymerase sigma-70 like domain LOS88_04205 IPR012761 RNA polymerase sigma factor RpoS LOS88_04205 IPR013325 RNA polymerase sigma factor, region 2 LOS88_04205 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_04205 IPR007624 RNA polymerase sigma-70 region 3 LOS88_04205 IPR007627 RNA polymerase sigma-70 region 2 LOS88_04205 IPR009042 RNA polymerase sigma-70 region 1.2 LOS88_04205 IPR000943 RNA polymerase sigma-70 LOS88_04205 IPR007630 RNA polymerase sigma-70 region 4 LOS88_04205 IPR013324 RNA polymerase sigma factor, region 3/4-like LOS88_04210 IPR013785 Aldolase-type TIM barrel LOS88_04210 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LOS88_04220 IPR007569 Protein of unknown function DUF559 LOS88_04220 IPR011335 Restriction endonuclease type II-like LOS88_04230 IPR005119 LysR, substrate-binding LOS88_04230 IPR000847 Transcription regulator HTH, LysR LOS88_04230 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_04230 IPR036390 Winged helix DNA-binding domain superfamily LOS88_04235 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type LOS88_04235 IPR017754 Agmatine deiminase LOS88_04240 IPR000120 Amidase LOS88_04240 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit LOS88_04240 IPR036928 Amidase signature (AS) superfamily LOS88_04240 IPR023631 Amidase signature domain LOS88_04240 IPR020556 Amidase, conserved site LOS88_04260 IPR032806 H repeat-associated protein, N-terminal LOS88_04260 IPR002559 Transposase, IS4-like LOS88_04275 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LOS88_04275 IPR001279 Metallo-beta-lactamase LOS88_04275 IPR001018 Beta-lactamase, class-B, conserved site LOS88_04285 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_04285 IPR001650 Helicase, C-terminal LOS88_04285 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_04285 IPR028622 ATP-dependent RNA helicase RhlE LOS88_04285 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04285 IPR011545 DEAD/DEAH box helicase domain LOS88_04285 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_04290 IPR029016 GAF-like domain superfamily LOS88_04290 IPR000160 GGDEF domain LOS88_04290 IPR029787 Nucleotide cyclase LOS88_04300 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal LOS88_04300 IPR002747 SAM-dependent chlorinase/fluorinase LOS88_04300 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal LOS88_04310 IPR009056 Cytochrome c-like domain LOS88_04310 IPR036909 Cytochrome c-like domain superfamily LOS88_04310 IPR004852 Di-haem cytochrome c peroxidase LOS88_04310 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase LOS88_04310 IPR022394 Methylamine utilisation protein, MauG LOS88_04320 IPR036430 Ribonuclease T2-like superfamily LOS88_04320 IPR001568 Ribonuclease T2-like LOS88_04320 IPR018188 Ribonuclease T2, His active site 1 LOS88_04320 IPR033130 Ribonuclease T2, His active site 2 LOS88_04325 IPR004136 Nitronate monooxygenase LOS88_04325 IPR013785 Aldolase-type TIM barrel LOS88_04350 IPR022925 NADH pyrophosphatase NudC LOS88_04350 IPR015375 NADH pyrophosphatase-like, N-terminal LOS88_04350 IPR015376 Zinc ribbon, NADH pyrophosphatase LOS88_04350 IPR000086 NUDIX hydrolase domain LOS88_04350 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_04365 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_04365 IPR011006 CheY-like superfamily LOS88_04365 IPR039420 Transcriptional regulatory protein WalR-like LOS88_04365 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_04365 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_04365 IPR001789 Signal transduction response regulator, receiver domain LOS88_04385 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme LOS88_04385 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase LOS88_04385 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain LOS88_04390 IPR004090 Chemotaxis methyl-accepting receptor LOS88_04390 IPR003660 HAMP domain LOS88_04390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_04395 IPR018490 Cyclic nucleotide-binding-like LOS88_04395 IPR018488 Cyclic nucleotide-binding, conserved site LOS88_04395 IPR000595 Cyclic nucleotide-binding domain LOS88_04395 IPR014710 RmlC-like jelly roll fold LOS88_04395 IPR028325 Voltage-gated potassium channel LOS88_04395 IPR005821 Ion transport domain LOS88_04400 IPR016476 SH3 domain protein LOS88_04400 IPR003646 SH3-like domain, bacterial-type LOS88_04405 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 LOS88_04405 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain LOS88_04405 IPR024090 Proline dehydrogenase PutA, domain I LOS88_04405 IPR024089 Proline dehydrogenase PutA, domain I/II LOS88_04405 IPR024082 Proline dehydrogenase PutA, domain II LOS88_04405 IPR029041 FAD-linked oxidoreductase-like LOS88_04405 IPR013321 Arc-type ribbon-helix-helix LOS88_04405 IPR010985 Ribbon-helix-helix LOS88_04405 IPR002872 Proline dehydrogenase domain LOS88_04405 IPR016160 Aldehyde dehydrogenase, cysteine active site LOS88_04405 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LOS88_04405 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_04405 IPR015590 Aldehyde dehydrogenase domain LOS88_04405 IPR025703 Bifunctional protein PutA LOS88_04405 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_04405 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_04410 IPR022925 NADH pyrophosphatase NudC LOS88_04410 IPR000086 NUDIX hydrolase domain LOS88_04410 IPR015376 Zinc ribbon, NADH pyrophosphatase LOS88_04410 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_04415 IPR038071 UROD/MetE-like superfamily LOS88_04415 IPR006361 Uroporphyrinogen decarboxylase HemE LOS88_04415 IPR000257 Uroporphyrinogen decarboxylase (URO-D) LOS88_04420 IPR000600 ROK family LOS88_04425 IPR006422 D-erythrose-4-phosphate dehydrogenase LOS88_04425 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LOS88_04425 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LOS88_04425 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LOS88_04425 IPR036291 NAD(P)-binding domain superfamily LOS88_04430 IPR015824 Phosphoglycerate kinase, N-terminal LOS88_04430 IPR001576 Phosphoglycerate kinase LOS88_04430 IPR015911 Phosphoglycerate kinase, conserved site LOS88_04430 IPR036043 Phosphoglycerate kinase superfamily LOS88_04435 IPR013785 Aldolase-type TIM barrel LOS88_04435 IPR000771 Fructose-bisphosphate aldolase, class-II LOS88_04435 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype LOS88_04440 IPR006076 FAD dependent oxidoreductase LOS88_04440 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_04455 IPR013766 Thioredoxin domain LOS88_04455 IPR003834 Cytochrome C biogenesis protein, transmembrane domain LOS88_04455 IPR022910 Thiol:disulphide interchange protein DsbD LOS88_04455 IPR036249 Thioredoxin-like superfamily LOS88_04455 IPR035671 DsbD gamma LOS88_04455 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LOS88_04455 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily LOS88_04455 IPR017937 Thioredoxin, conserved site LOS88_04460 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LOS88_04460 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria LOS88_04460 IPR004323 Divalent ion tolerance protein, CutA LOS88_04460 IPR011322 Nitrogen regulatory PII-like, alpha/beta LOS88_04475 IPR036390 Winged helix DNA-binding domain superfamily LOS88_04475 IPR005119 LysR, substrate-binding LOS88_04475 IPR037424 Regulatory protein NocR, PBP2 domain LOS88_04475 IPR000847 Transcription regulator HTH, LysR LOS88_04475 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_04480 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal LOS88_04480 IPR023758 tRNA-modifying protein YgfZ LOS88_04480 IPR006222 Aminomethyltransferase, folate-binding domain LOS88_04480 IPR017703 YgfZ/GcvT conserved site LOS88_04485 IPR005631 Flavinator of succinate dehydrogenase LOS88_04485 IPR036714 Flavinator of succinate dehydrogenase superfamily LOS88_04495 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_04495 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LOS88_04495 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LOS88_04495 IPR005288 L-aspartate oxidase LOS88_04495 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LOS88_04495 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LOS88_04500 IPR013324 RNA polymerase sigma factor, region 3/4-like LOS88_04500 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_04500 IPR013325 RNA polymerase sigma factor, region 2 LOS88_04500 IPR014286 RNA polymerase sigma-70 RpoE type LOS88_04500 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LOS88_04500 IPR007627 RNA polymerase sigma-70 region 2 LOS88_04500 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LOS88_04500 IPR014284 RNA polymerase sigma-70 like domain LOS88_04500 IPR039425 RNA polymerase sigma-70 like LOS88_04505 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily LOS88_04505 IPR005572 Anti sigma-E protein RseA, N-terminal LOS88_04505 IPR005573 Anti sigma-E protein RseA, C-terminal LOS88_04505 IPR026279 Sigma-E factor negative regulatory protein RseA LOS88_04510 IPR038484 MucB/RseB, C-terminal domain superfamily LOS88_04510 IPR033434 MucB/RseB, N-terminal LOS88_04510 IPR005588 MucB/RseB LOS88_04510 IPR033436 MucB/RseB, C-terminal LOS88_04520 IPR006297 Elongation factor 4 LOS88_04520 IPR035647 EF-G domain III/V-like LOS88_04520 IPR000640 Elongation factor EFG, domain V-like LOS88_04520 IPR004161 Translation elongation factor EFTu-like, domain 2 LOS88_04520 IPR031157 Tr-type G domain, conserved site LOS88_04520 IPR038363 LepA, C-terminal domain superfamily LOS88_04520 IPR013842 GTP-binding protein LepA, C-terminal LOS88_04520 IPR035654 Elongation factor 4, domain IV LOS88_04520 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04520 IPR005225 Small GTP-binding protein domain LOS88_04520 IPR000795 Transcription factor, GTP-binding domain LOS88_04525 IPR036286 LexA/Signal peptidase-like superfamily LOS88_04525 IPR019758 Peptidase S26A, signal peptidase I, conserved site LOS88_04525 IPR019757 Peptidase S26A, signal peptidase I, lysine active site LOS88_04525 IPR019756 Peptidase S26A, signal peptidase I, serine active site LOS88_04525 IPR019533 Peptidase S26 LOS88_04525 IPR000223 Peptidase S26A, signal peptidase I LOS88_04530 IPR014720 Double-stranded RNA-binding domain LOS88_04530 IPR036389 Ribonuclease III, endonuclease domain superfamily LOS88_04530 IPR011907 Ribonuclease III LOS88_04530 IPR000999 Ribonuclease III domain LOS88_04535 IPR005225 Small GTP-binding protein domain LOS88_04535 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04535 IPR009019 K homology domain superfamily, prokaryotic type LOS88_04535 IPR004044 K Homology domain, type 2 LOS88_04535 IPR015946 K homology domain-like, alpha/beta LOS88_04535 IPR006073 GTP binding domain LOS88_04535 IPR005662 GTP-binding protein Era LOS88_04535 IPR030388 Era-type guanine nucleotide-binding (G) domain LOS88_04540 IPR022572 DNA replication/recombination mediator RecO, N-terminal LOS88_04540 IPR012340 Nucleic acid-binding, OB-fold LOS88_04540 IPR003717 Recombination protein O, RecO LOS88_04540 IPR037278 ARFGAP/RecO-like zinc finger LOS88_04545 IPR013785 Aldolase-type TIM barrel LOS88_04545 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ LOS88_04545 IPR036130 Pyridoxine 5'-phosphate synthase LOS88_04550 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ LOS88_04550 IPR020583 Inositol monophosphatase, metal-binding site LOS88_04550 IPR000760 Inositol monophosphatase-like LOS88_04550 IPR020550 Inositol monophosphatase, conserved site LOS88_04555 IPR011008 Dimeric alpha-beta barrel LOS88_04555 IPR005545 YCII-related LOS88_04560 IPR006008 Intracellular septation protein A LOS88_04565 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent LOS88_04565 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_04565 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_04565 IPR002129 Pyridoxal phosphate-dependent decarboxylase LOS88_04570 IPR005744 Hly-III LOS88_04570 IPR004254 AdipoR/Haemolysin-III-related LOS88_04575 IPR006512 YidE/YbjL duplication LOS88_04575 IPR023018 Transport protein YidE, putative LOS88_04575 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LOS88_04575 IPR006037 Regulator of K+ conductance, C-terminal LOS88_04590 IPR000160 GGDEF domain LOS88_04590 IPR029787 Nucleotide cyclase LOS88_04590 IPR005330 MHYT domain LOS88_04590 IPR035919 EAL domain superfamily LOS88_04590 IPR001633 EAL domain LOS88_04595 IPR036701 RraB-like superfamily LOS88_04595 IPR016716 Regulator of ribonuclease activity B LOS88_04595 IPR009671 Regulator of ribonuclease activity B domain LOS88_04615 IPR000073 Alpha/beta hydrolase fold-1 LOS88_04615 IPR002410 Peptidase S33 LOS88_04615 IPR029058 Alpha/Beta hydrolase fold LOS88_04620 IPR001148 Alpha carbonic anhydrase domain LOS88_04620 IPR036398 Alpha carbonic anhydrase domain superfamily LOS88_04620 IPR023561 Carbonic anhydrase, alpha-class LOS88_04620 IPR018338 Carbonic anhydrase, alpha-class, conserved site LOS88_04620 IPR041891 Carbonic anhydrase, prokaryotic-like LOS88_04625 IPR022830 Indigoidine synthase A-like LOS88_04625 IPR007342 Pseudouridine-5'-phosphate glycosidase LOS88_04630 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LOS88_04630 IPR011611 Carbohydrate kinase PfkB LOS88_04630 IPR029056 Ribokinase-like LOS88_04645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_04645 IPR006015 Universal stress protein A family LOS88_04645 IPR006016 UspA LOS88_04655 IPR001897 Porin, gammaproteobacterial LOS88_04655 IPR001702 Porin, Gram-negative type LOS88_04655 IPR013793 Porin, Gram-negative type, conserved site LOS88_04655 IPR023614 Porin domain superfamily LOS88_04660 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LOS88_04660 IPR013216 Methyltransferase type 11 LOS88_04660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_04665 IPR018490 Cyclic nucleotide-binding-like LOS88_04665 IPR018488 Cyclic nucleotide-binding, conserved site LOS88_04665 IPR012318 Crp-type HTH domain LOS88_04665 IPR014710 RmlC-like jelly roll fold LOS88_04665 IPR018335 Transcription regulator HTH, Crp-type, conserved site LOS88_04665 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_04665 IPR036390 Winged helix DNA-binding domain superfamily LOS88_04665 IPR000595 Cyclic nucleotide-binding domain LOS88_04675 IPR015946 K homology domain-like, alpha/beta LOS88_04675 IPR003718 OsmC/Ohr family LOS88_04675 IPR036102 OsmC/Ohr superfamily LOS88_04690 IPR006083 Phosphoribulokinase/uridine kinase LOS88_04690 IPR006082 Phosphoribulokinase LOS88_04690 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04695 IPR036685 YehU-like superfamily LOS88_04695 IPR010648 Uncharacterised protein family UPF0270 LOS88_04700 IPR035919 EAL domain superfamily LOS88_04700 IPR013515 Phytochrome, central region LOS88_04700 IPR001294 Phytochrome LOS88_04700 IPR016132 Phytochrome chromophore attachment domain LOS88_04700 IPR029787 Nucleotide cyclase LOS88_04700 IPR000160 GGDEF domain LOS88_04700 IPR029016 GAF-like domain superfamily LOS88_04700 IPR003018 GAF domain LOS88_04700 IPR001633 EAL domain LOS88_04705 IPR000073 Alpha/beta hydrolase fold-1 LOS88_04705 IPR029058 Alpha/Beta hydrolase fold LOS88_04705 IPR012020 AB hydrolase 4 family LOS88_04705 IPR000952 AB hydrolase 4, conserved site LOS88_04710 IPR036061 CheW-like domain superfamily LOS88_04710 IPR011006 CheY-like superfamily LOS88_04710 IPR001789 Signal transduction response regulator, receiver domain LOS88_04710 IPR024181 Chemotaxis response regulator CheV LOS88_04710 IPR002545 CheW-like domain LOS88_04720 IPR012658 Conserved hypothetical protein CHP02443 LOS88_04725 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LOS88_04735 IPR007693 DNA helicase, DnaB-like, N-terminal LOS88_04735 IPR003593 AAA+ ATPase domain LOS88_04735 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily LOS88_04735 IPR007692 DNA helicase, DnaB type LOS88_04735 IPR007694 DNA helicase, DnaB-like, C-terminal LOS88_04735 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04735 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LOS88_04740 IPR029066 PLP-binding barrel LOS88_04740 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site LOS88_04740 IPR001608 Alanine racemase, N-terminal LOS88_04740 IPR011079 Alanine racemase, C-terminal LOS88_04740 IPR000821 Alanine racemase LOS88_04740 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LOS88_04745 IPR001602 Uncharacterised protein family UPF0047 LOS88_04745 IPR035917 YjbQ-like superfamily LOS88_04750 IPR005320 Peptidase S51 LOS88_04750 IPR029062 Class I glutamine amidotransferase-like LOS88_04750 IPR023172 Peptidase S51, dipeptidase E LOS88_04755 IPR025299 CstA, C-terminal domain LOS88_04755 IPR003706 CstA, N-terminal domain LOS88_04760 IPR011006 CheY-like superfamily LOS88_04760 IPR001789 Signal transduction response regulator, receiver domain LOS88_04760 IPR007492 LytTR DNA-binding domain LOS88_04765 IPR003018 GAF domain LOS88_04765 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LOS88_04765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_04765 IPR010559 Signal transduction histidine kinase, internal region LOS88_04775 IPR003439 ABC transporter-like LOS88_04775 IPR003593 AAA+ ATPase domain LOS88_04775 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04775 IPR015863 ABC transporter, hemin import, HmuV LOS88_04780 IPR037294 ABC transporter, BtuC-like LOS88_04780 IPR000522 ABC transporter, permease protein, BtuC-like LOS88_04790 IPR010413 Intracellular heme transport protein HutX-like LOS88_04795 IPR012349 FMN-binding split barrel LOS88_04795 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative LOS88_04795 IPR014419 Heme utilization protein HutZ LOS88_04815 IPR036397 Ribonuclease H superfamily LOS88_04815 IPR009057 Homeobox-like domain superfamily LOS88_04815 IPR001584 Integrase, catalytic core LOS88_04815 IPR012337 Ribonuclease H-like superfamily LOS88_04815 IPR001598 Transposase, IS30, conserved site LOS88_04825 IPR039426 Vitamin B12 transporter BtuB-like LOS88_04825 IPR012910 TonB-dependent receptor, plug domain LOS88_04825 IPR037066 TonB-dependent receptor, plug domain superfamily LOS88_04825 IPR000531 TonB-dependent receptor-like, beta-barrel LOS88_04825 IPR011276 TonB-dependent haem/haemoglobin receptor LOS88_04825 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor LOS88_04825 IPR010917 TonB-dependent receptor, conserved site LOS88_04830 IPR024989 Major facilitator superfamily associated domain LOS88_04830 IPR026032 Probable 3-phenylpropionic acid transporter LOS88_04830 IPR036259 MFS transporter superfamily LOS88_04840 IPR001387 Cro/C1-type helix-turn-helix domain LOS88_04840 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_04850 IPR011006 CheY-like superfamily LOS88_04850 IPR003660 HAMP domain LOS88_04850 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_04850 IPR005467 Histidine kinase domain LOS88_04850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_04850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_04850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_04850 IPR036641 HPT domain superfamily LOS88_04850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_04850 IPR019247 Histidine kinase BarA, N-terminal LOS88_04850 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_04850 IPR001789 Signal transduction response regulator, receiver domain LOS88_04855 IPR022409 PKD/Chitinase domain LOS88_04855 IPR014756 Immunoglobulin E-set LOS88_04855 IPR013783 Immunoglobulin-like fold LOS88_04855 IPR017853 Glycoside hydrolase superfamily LOS88_04855 IPR001579 Glycoside hydrolase, chitinase active site LOS88_04855 IPR013540 Chitinase A N-terminal LOS88_04855 IPR029070 Chitinase insertion domain superfamily LOS88_04855 IPR011583 Chitinase II LOS88_04855 IPR001223 Glycoside hydrolase family 18, catalytic domain LOS88_04860 IPR000700 PAS-associated, C-terminal LOS88_04860 IPR000160 GGDEF domain LOS88_04860 IPR013656 PAS fold-4 LOS88_04860 IPR000014 PAS domain LOS88_04860 IPR029787 Nucleotide cyclase LOS88_04860 IPR035965 PAS domain superfamily LOS88_04865 IPR001223 Glycoside hydrolase family 18, catalytic domain LOS88_04865 IPR029070 Chitinase insertion domain superfamily LOS88_04865 IPR001579 Glycoside hydrolase, chitinase active site LOS88_04865 IPR017853 Glycoside hydrolase superfamily LOS88_04865 IPR013783 Immunoglobulin-like fold LOS88_04865 IPR014756 Immunoglobulin E-set LOS88_04865 IPR022409 PKD/Chitinase domain LOS88_04865 IPR013540 Chitinase A N-terminal LOS88_04865 IPR011583 Chitinase II LOS88_04870 IPR040966 Metalloprotease StcE, C-terminal LOS88_04870 IPR022218 ToxR activated gene A lipoprotein domain LOS88_04870 IPR019503 Peptidase M66 domain LOS88_04875 IPR041029 N-acetylglucosamine binding protein A domain 2 LOS88_04875 IPR004302 Cellulose/chitin-binding protein, N-terminal LOS88_04875 IPR014756 Immunoglobulin E-set LOS88_04875 IPR020879 N-acetylglucosamine-binding protein A LOS88_04915 IPR001789 Signal transduction response regulator, receiver domain LOS88_04915 IPR011006 CheY-like superfamily LOS88_04915 IPR024181 Chemotaxis response regulator CheV LOS88_04915 IPR002545 CheW-like domain LOS88_04915 IPR036061 CheW-like domain superfamily LOS88_04920 IPR008265 Lipase, GDSL, active site LOS88_04920 IPR013830 SGNH hydrolase-type esterase domain LOS88_04920 IPR036514 SGNH hydrolase superfamily LOS88_04925 IPR003439 ABC transporter-like LOS88_04925 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_04925 IPR003593 AAA+ ATPase domain LOS88_04925 IPR017871 ABC transporter, conserved site LOS88_04930 IPR038766 Membrane component of ABC transporter, predicted LOS88_04935 IPR036291 NAD(P)-binding domain superfamily LOS88_04935 IPR001509 NAD-dependent epimerase/dehydratase LOS88_04935 IPR013549 Domain of unknown function DUF1731 LOS88_04935 IPR010099 Epimerase family protein SDR39U1 LOS88_04940 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LOS88_04940 IPR035919 EAL domain superfamily LOS88_04940 IPR001633 EAL domain LOS88_04945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_04945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_04945 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_04945 IPR004839 Aminotransferase, class I/classII LOS88_04950 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type LOS88_04950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_04955 IPR007416 Protein of unknown function DUF469 LOS88_04960 IPR015868 Glutaminase LOS88_04960 IPR012338 Beta-lactamase/transpeptidase-like LOS88_04965 IPR001307 Thiosulphate sulfurtransferase, conserved site LOS88_04965 IPR001763 Rhodanese-like domain LOS88_04965 IPR036873 Rhodanese-like domain superfamily LOS88_04970 IPR010920 LSM domain superfamily LOS88_04970 IPR010305 Protein of unknown function DUF903 LOS88_05005 IPR013762 Integrase-like, catalytic domain superfamily LOS88_05005 IPR002104 Integrase, catalytic domain LOS88_05005 IPR011932 Tyrosine recombinase XerD LOS88_05005 IPR023009 Tyrosine recombinase XerC/XerD LOS88_05005 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_05005 IPR004107 Integrase, SAM-like, N-terminal LOS88_05005 IPR010998 Integrase/recombinase, N-terminal LOS88_05015 IPR017508 HipA, N-terminal subdomain 1 LOS88_05015 IPR012893 HipA-like, C-terminal LOS88_05030 IPR008514 Type VI secretion system effector, Hcp LOS88_05030 IPR036624 Hcp1-like superfamily LOS88_05040 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset LOS88_05040 IPR037026 Vgr protein, OB-fold domain superfamily LOS88_05040 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LOS88_05040 IPR006531 Gp5 N-terminal LOS88_05100 IPR042174 DNA-binding RecF, domain 2 LOS88_05100 IPR001238 DNA-binding, RecF LOS88_05100 IPR018078 DNA-binding, RecF, conserved site LOS88_05100 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_05100 IPR003395 RecF/RecN/SMC, N-terminal LOS88_05105 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_05105 IPR002611 IstB-like ATP-binding protein LOS88_05105 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_05105 IPR003593 AAA+ ATPase domain LOS88_05110 IPR012337 Ribonuclease H-like superfamily LOS88_05110 IPR001584 Integrase, catalytic core LOS88_05110 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LOS88_05110 IPR036397 Ribonuclease H superfamily LOS88_05145 IPR002513 Tn3 transposase DDE domain LOS88_05145 IPR025296 Domain of unknown function DUF4158 LOS88_05150 IPR006119 Resolvase, N-terminal catalytic domain LOS88_05150 IPR006120 Resolvase, HTH domain LOS88_05150 IPR006118 Recombinase, conserved site LOS88_05150 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_05150 IPR009057 Homeobox-like domain superfamily LOS88_05155 IPR001633 EAL domain LOS88_05155 IPR021767 Transposon Tn21 modulator protein LOS88_05155 IPR035919 EAL domain superfamily LOS88_05165 IPR007746 Broad mercury transporter MerE LOS88_05170 IPR000551 MerR-type HTH domain LOS88_05170 IPR011797 Mercuric resistence transcriptional repressor protein MerD LOS88_05170 IPR009061 Putative DNA-binding domain superfamily LOS88_05175 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LOS88_05175 IPR017969 Heavy-metal-associated, conserved site LOS88_05175 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOS88_05175 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LOS88_05175 IPR021179 Mercury(II) reductase LOS88_05175 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_05175 IPR036163 Heavy metal-associated domain superfamily LOS88_05175 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LOS88_05175 IPR006121 Heavy metal-associated domain, HMA LOS88_05175 IPR023753 FAD/NAD(P)-binding domain LOS88_05180 IPR017969 Heavy-metal-associated, conserved site LOS88_05180 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ LOS88_05180 IPR011795 Mercuric transport protein periplasmic component LOS88_05180 IPR036163 Heavy metal-associated domain superfamily LOS88_05180 IPR006121 Heavy metal-associated domain, HMA LOS88_05185 IPR003457 Mercuric transport protein MerT LOS88_05190 IPR015358 Transcription regulator MerR, DNA binding LOS88_05190 IPR000551 MerR-type HTH domain LOS88_05190 IPR011794 Hg(II)-responsive transcriptional regulator LOS88_05190 IPR009061 Putative DNA-binding domain superfamily LOS88_05195 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal LOS88_05195 IPR003346 Transposase, IS116/IS110/IS902 LOS88_05200 IPR003439 ABC transporter-like LOS88_05200 IPR003593 AAA+ ATPase domain LOS88_05200 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_05200 IPR032781 ABC-transporter extension domain LOS88_05205 IPR002575 Aminoglycoside phosphotransferase LOS88_05205 IPR011009 Protein kinase-like domain superfamily LOS88_05210 IPR009057 Homeobox-like domain superfamily LOS88_05210 IPR006118 Recombinase, conserved site LOS88_05210 IPR006119 Resolvase, N-terminal catalytic domain LOS88_05210 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_05210 IPR006120 Resolvase, HTH domain LOS88_05220 IPR003607 HD/PDEase domain LOS88_05220 IPR006674 HD domain LOS88_05220 IPR037522 HD-GYP domain LOS88_05220 IPR006675 HDIG domain LOS88_05220 IPR021812 Protein of unknown function DUF3391 LOS88_05255 IPR006120 Resolvase, HTH domain LOS88_05255 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_05255 IPR006119 Resolvase, N-terminal catalytic domain LOS88_05255 IPR006118 Recombinase, conserved site LOS88_05255 IPR009057 Homeobox-like domain superfamily LOS88_05300 IPR005829 Sugar transporter, conserved site LOS88_05300 IPR020846 Major facilitator superfamily domain LOS88_05300 IPR011701 Major facilitator superfamily LOS88_05300 IPR036259 MFS transporter superfamily LOS88_05300 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LOS88_05305 IPR001647 DNA-binding HTH domain, TetR-type LOS88_05305 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LOS88_05305 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LOS88_05305 IPR009057 Homeobox-like domain superfamily LOS88_05305 IPR003012 Tetracycline transcriptional regulator, TetR LOS88_05305 IPR004111 Tetracycline repressor TetR, C-terminal LOS88_05320 IPR001586 Beta-lactamase, class-C active site LOS88_05320 IPR012338 Beta-lactamase/transpeptidase-like LOS88_05320 IPR001466 Beta-lactamase-related LOS88_05335 IPR001586 Beta-lactamase, class-C active site LOS88_05335 IPR001466 Beta-lactamase-related LOS88_05335 IPR012338 Beta-lactamase/transpeptidase-like LOS88_05340 IPR001584 Integrase, catalytic core LOS88_05340 IPR012337 Ribonuclease H-like superfamily LOS88_05340 IPR001598 Transposase, IS30, conserved site LOS88_05340 IPR009057 Homeobox-like domain superfamily LOS88_05340 IPR036397 Ribonuclease H superfamily LOS88_05345 IPR000727 Target SNARE coiled-coil homology domain LOS88_05345 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_05345 IPR004090 Chemotaxis methyl-accepting receptor LOS88_05345 IPR003660 HAMP domain LOS88_05345 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_05355 IPR000390 Small multidrug resistance protein family LOS88_05360 IPR001451 Hexapeptide repeat LOS88_05360 IPR018357 Hexapeptide transferase, conserved site LOS88_05360 IPR011004 Trimeric LpxA-like superfamily LOS88_05365 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM LOS88_05365 IPR036165 YefM-like superfamily LOS88_05370 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily LOS88_05370 IPR009614 Toxin YoeB LOS88_05375 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type LOS88_05375 IPR000182 GNAT domain LOS88_05375 IPR016181 Acyl-CoA N-acyltransferase LOS88_05385 IPR013762 Integrase-like, catalytic domain superfamily LOS88_05385 IPR002104 Integrase, catalytic domain LOS88_05385 IPR010998 Integrase/recombinase, N-terminal LOS88_05385 IPR004107 Integrase, SAM-like, N-terminal LOS88_05385 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_05385 IPR011946 Integrase, integron-type LOS88_05390 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_05390 IPR006118 Recombinase, conserved site LOS88_05390 IPR006119 Resolvase, N-terminal catalytic domain LOS88_05390 IPR006120 Resolvase, HTH domain LOS88_05390 IPR009057 Homeobox-like domain superfamily LOS88_05395 IPR002513 Tn3 transposase DDE domain LOS88_05395 IPR025296 Domain of unknown function DUF4158 LOS88_05405 IPR016181 Acyl-CoA N-acyltransferase LOS88_05415 IPR032874 DDE domain LOS88_05415 IPR036397 Ribonuclease H superfamily LOS88_05415 IPR001584 Integrase, catalytic core LOS88_05415 IPR012337 Ribonuclease H-like superfamily LOS88_05435 IPR002575 Aminoglycoside phosphotransferase LOS88_05435 IPR011009 Protein kinase-like domain superfamily LOS88_05440 IPR032874 DDE domain LOS88_05440 IPR001584 Integrase, catalytic core LOS88_05440 IPR012337 Ribonuclease H-like superfamily LOS88_05440 IPR036397 Ribonuclease H superfamily LOS88_05500 IPR007476 Putative exonuclease, RdgC LOS88_05520 IPR009057 Homeobox-like domain superfamily LOS88_05520 IPR001598 Transposase, IS30, conserved site LOS88_05520 IPR036397 Ribonuclease H superfamily LOS88_05520 IPR012337 Ribonuclease H-like superfamily LOS88_05520 IPR001584 Integrase, catalytic core LOS88_05550 IPR002071 Thermonuclease active site LOS88_05550 IPR035437 SNase-like, OB-fold superfamily LOS88_05550 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold LOS88_05555 IPR000119 Histone-like DNA-binding protein LOS88_05555 IPR020816 Histone-like DNA-binding protein, conserved site LOS88_05555 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LOS88_05575 IPR025669 AAA domain LOS88_05575 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_05580 IPR004437 ParB/RepB/Spo0J partition protein LOS88_05580 IPR010575 KorB, C-terminal LOS88_05580 IPR037048 KorB, C-terminal domain superfamily LOS88_05580 IPR042075 KorB DNA-binding domain LOS88_05580 IPR013741 Repressor KorB domain LOS88_05580 IPR008988 Transcriptional repressor, C-terminal LOS88_05580 IPR003115 ParB/Sulfiredoxin LOS88_05580 IPR036086 ParB/Sulfiredoxin superfamily LOS88_05620 IPR018306 Bacteriophage T5, Orf172 DNA-binding LOS88_05625 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_05625 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_05630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_05640 IPR005738 DNA topoisomerase III LOS88_05640 IPR006171 TOPRIM domain LOS88_05640 IPR003601 DNA topoisomerase, type IA, domain 2 LOS88_05640 IPR023405 DNA topoisomerase, type IA, core domain LOS88_05640 IPR023406 DNA topoisomerase, type IA, active site LOS88_05640 IPR013497 DNA topoisomerase, type IA, central LOS88_05640 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LOS88_05640 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LOS88_05640 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LOS88_05640 IPR034144 DNA topoisomerase 3-like, TOPRIM domain LOS88_05640 IPR000380 DNA topoisomerase, type IA LOS88_05640 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LOS88_05715 IPR005644 NolW-like LOS88_05715 IPR003522 Type III secretion system outer membrane pore YscC/HrcC LOS88_05715 IPR004845 Type II secretion system GspD, conserved site LOS88_05715 IPR004846 Type II/III secretion system LOS88_05715 IPR038591 NolW-like superfamily LOS88_05740 IPR033954 Disulphide bond isomerase, DsbC/G LOS88_05740 IPR017937 Thioredoxin, conserved site LOS88_05740 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LOS88_05740 IPR036249 Thioredoxin-like superfamily LOS88_05740 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily LOS88_05740 IPR012336 Thioredoxin-like fold LOS88_05760 IPR014114 Type-F conjugative transfer system protein TraW LOS88_05760 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain LOS88_05800 IPR036425 MoaB/Mog-like domain superfamily LOS88_05800 IPR001453 MoaB/Mog domain LOS88_05800 IPR008284 Molybdenum cofactor biosynthesis, conserved site LOS88_05810 IPR010619 Putative threonine/serine exporter LOS88_05815 IPR024528 Threonine/Serine exporter, ThrE LOS88_05815 IPR020914 Uncharacterised protein family UPF0442 LOS88_05820 IPR012259 Dihydrofolate reductase LOS88_05820 IPR024072 Dihydrofolate reductase-like domain superfamily LOS88_05820 IPR017925 Dihydrofolate reductase conserved site LOS88_05820 IPR001796 Dihydrofolate reductase domain LOS88_05825 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase LOS88_05825 IPR002500 Phosphoadenosine phosphosulphate reductase LOS88_05825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_05825 IPR011800 Phosphoadenosine phosphosulphate reductase CysH LOS88_05830 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LOS88_05830 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LOS88_05830 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LOS88_05830 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LOS88_05830 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit LOS88_05835 IPR029039 Flavoprotein-like superfamily LOS88_05835 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LOS88_05835 IPR008254 Flavodoxin/nitric oxide synthase LOS88_05835 IPR001094 Flavodoxin-like LOS88_05835 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_05835 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_05835 IPR001433 Oxidoreductase FAD/NAD(P)-binding LOS88_05835 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding LOS88_05835 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain LOS88_05835 IPR017938 Riboflavin synthase-like beta-barrel LOS88_05835 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria LOS88_05835 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily LOS88_05840 IPR003719 Phenazine biosynthesis PhzF protein LOS88_05845 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal LOS88_05845 IPR012340 Nucleic acid-binding, OB-fold LOS88_05845 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LOS88_05845 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II LOS88_05845 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LOS88_05845 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_05845 IPR002313 Lysine-tRNA ligase, class II LOS88_05855 IPR003660 HAMP domain LOS88_05855 IPR000727 Target SNARE coiled-coil homology domain LOS88_05855 IPR029151 Periplasmic sensor-like domain superfamily LOS88_05855 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_05855 IPR033479 Double Cache domain 1 LOS88_05860 IPR004445 Sodium/glutamate symport carrier protein GltS LOS88_05865 IPR037152 L-asparaginase, N-terminal domain superfamily LOS88_05865 IPR027474 L-asparaginase, N-terminal LOS88_05865 IPR041725 Type I (cytosolic) L-asparaginase LOS88_05865 IPR036152 Asparaginase/glutaminase-like superfamily LOS88_05865 IPR040919 Asparaginase/glutaminase, C-terminal LOS88_05865 IPR006034 Asparaginase/glutaminase-like LOS88_05865 IPR020827 Asparaginase/glutaminase, active site 1 LOS88_05865 IPR006033 Type I L-asparaginase family LOS88_05865 IPR027473 L-asparaginase, C-terminal LOS88_05865 IPR027475 Asparaginase/glutaminase, active site 2 LOS88_05870 IPR009749 Protein of unknown function DUF1315 LOS88_05875 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LOS88_05875 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site LOS88_05875 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LOS88_05875 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I LOS88_05875 IPR036291 NAD(P)-binding domain superfamily LOS88_05875 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LOS88_05890 IPR013785 Aldolase-type TIM barrel LOS88_05890 IPR007197 Radical SAM LOS88_05890 IPR003698 Lipoyl synthase LOS88_05890 IPR031691 Lipoyl synthase, N-terminal LOS88_05890 IPR006638 Elp3/MiaB/NifB LOS88_05895 IPR020605 Octanoyltransferase, conserved site LOS88_05895 IPR000544 Octanoyltransferase LOS88_05895 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LOS88_05900 IPR007454 Uncharacterised protein family UPF0250 LOS88_05900 IPR027471 YbeD-like domain superfamily LOS88_05905 IPR012338 Beta-lactamase/transpeptidase-like LOS88_05905 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LOS88_05905 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LOS88_05905 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LOS88_05905 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LOS88_05905 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LOS88_05910 IPR034718 Endolytic peptidoglycan transglycosylase RlpA LOS88_05910 IPR009009 RlpA-like protein, double-psi beta-barrel domain LOS88_05910 IPR036908 RlpA-like domain superfamily LOS88_05910 IPR012997 Rare lipoprotein A LOS88_05910 IPR007730 Sporulation-like domain LOS88_05910 IPR036680 Sporulation-like domain superfamily LOS88_05915 IPR011757 Lytic transglycosylase MltB LOS88_05915 IPR031304 Transglycosylase SLT domain 2 LOS88_05915 IPR023346 Lysozyme-like domain superfamily LOS88_05920 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LOS88_05920 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LOS88_05920 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB LOS88_05925 IPR005311 Penicillin-binding protein, dimerisation domain LOS88_05925 IPR017790 Penicillin-binding protein 2 LOS88_05925 IPR001460 Penicillin-binding protein, transpeptidase LOS88_05925 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LOS88_05925 IPR012338 Beta-lactamase/transpeptidase-like LOS88_05930 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LOS88_05930 IPR003742 RNA methyltransferase RlmH LOS88_05930 IPR029028 Alpha/beta knot methyltransferases LOS88_05935 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LOS88_05940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_05940 IPR004821 Cytidyltransferase-like domain LOS88_05940 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase LOS88_05955 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LOS88_05955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_05955 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LOS88_05955 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_05955 IPR002300 Aminoacyl-tRNA synthetase, class Ia LOS88_05955 IPR002302 Leucine-tRNA ligase LOS88_05955 IPR025709 Leucyl-tRNA synthetase, editing domain LOS88_05955 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LOS88_05960 IPR009912 Zinc-ribbon containing domain LOS88_05965 IPR035068 Metalloprotease TldD/PmbA, N-terminal LOS88_05965 IPR036059 Metalloprotease TldD/PmbA superfamily LOS88_05965 IPR025502 TldD LOS88_05965 IPR002510 Metalloprotease TldD/PmbA LOS88_05970 IPR025502 TldD LOS88_05970 IPR002510 Metalloprotease TldD/PmbA LOS88_05970 IPR035068 Metalloprotease TldD/PmbA, N-terminal LOS88_05970 IPR036059 Metalloprotease TldD/PmbA superfamily LOS88_05975 IPR008254 Flavodoxin/nitric oxide synthase LOS88_05975 IPR001226 Flavodoxin, conserved site LOS88_05975 IPR010086 Flavodoxin, long chain LOS88_05975 IPR029039 Flavoprotein-like superfamily LOS88_05980 IPR002104 Integrase, catalytic domain LOS88_05980 IPR010998 Integrase/recombinase, N-terminal LOS88_05980 IPR004107 Integrase, SAM-like, N-terminal LOS88_05980 IPR011932 Tyrosine recombinase XerD LOS88_05980 IPR023009 Tyrosine recombinase XerC/XerD LOS88_05980 IPR013762 Integrase-like, catalytic domain superfamily LOS88_05980 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_05985 IPR019823 Large-conductance mechanosensitive channel, conserved site LOS88_05985 IPR001185 Large-conductance mechanosensitive channel LOS88_05985 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L LOS88_05985 IPR036019 Gated mechanosensitive channel LOS88_05995 IPR004610 Bacterial RecJ exonuclease LOS88_05995 IPR041122 RecJ, OB domain LOS88_05995 IPR003156 DHHA1 domain LOS88_05995 IPR001667 DDH domain LOS88_05995 IPR038763 DHH phosphoesterase superfamily LOS88_06000 IPR009061 Putative DNA-binding domain superfamily LOS88_06000 IPR000551 MerR-type HTH domain LOS88_06000 IPR037392 YfmP, Helix-Turn-Helix DNA binding domain LOS88_06005 IPR036526 Carbon-nitrogen hydrolase superfamily LOS88_06005 IPR004563 Apolipoprotein N-acyltransferase LOS88_06005 IPR003010 Carbon-nitrogen hydrolase LOS88_06010 IPR005170 Transporter-associated domain LOS88_06010 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_06010 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_06010 IPR000644 CBS domain LOS88_06015 IPR002036 Endoribonuclease YbeY LOS88_06015 IPR020549 Endoribonuclease YbeY, conserved site LOS88_06015 IPR023091 Metalloprotease catalytic domain superfamily, predicted LOS88_06020 IPR003714 PhoH-like protein LOS88_06020 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_06025 IPR038135 Methylthiotransferase, N-terminal domain superfamily LOS88_06025 IPR013848 Methylthiotransferase, N-terminal LOS88_06025 IPR005839 Methylthiotransferase LOS88_06025 IPR020612 Methylthiotransferase, conserved site LOS88_06025 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB LOS88_06025 IPR007197 Radical SAM LOS88_06025 IPR006638 Elp3/MiaB/NifB LOS88_06025 IPR002792 TRAM domain LOS88_06025 IPR023404 Radical SAM, alpha/beta horseshoe LOS88_06030 IPR002938 FAD-binding domain LOS88_06030 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_06030 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site LOS88_06030 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 LOS88_06035 IPR019916 Isochorismatase, RutB LOS88_06035 IPR036380 Isochorismatase-like superfamily LOS88_06035 IPR000868 Isochorismatase-like LOS88_06040 IPR012340 Nucleic acid-binding, OB-fold LOS88_06040 IPR002059 Cold-shock protein, DNA-binding LOS88_06040 IPR019844 Cold-shock (CSD) domain LOS88_06040 IPR011129 Cold shock domain LOS88_06040 IPR012156 Cold shock, CspA LOS88_06045 IPR000160 GGDEF domain LOS88_06045 IPR007894 MASE2 LOS88_06045 IPR029787 Nucleotide cyclase LOS88_06050 IPR005119 LysR, substrate-binding LOS88_06050 IPR000847 Transcription regulator HTH, LysR LOS88_06050 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_06050 IPR036390 Winged helix DNA-binding domain superfamily LOS88_06060 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_06060 IPR036412 HAD-like superfamily LOS88_06060 IPR006439 HAD hydrolase, subfamily IA LOS88_06060 IPR023214 HAD superfamily LOS88_06060 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_06080 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LOS88_06080 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LOS88_06080 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LOS88_06080 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOS88_06080 IPR036291 NAD(P)-binding domain superfamily LOS88_06090 IPR011768 Translation elongation factor P LOS88_06090 IPR008991 Translation protein SH3-like domain superfamily LOS88_06090 IPR001059 Translation elongation factor P/YeiP, central LOS88_06090 IPR015365 Elongation factor P, C-terminal LOS88_06090 IPR020599 Translation elongation factor P/YeiP LOS88_06090 IPR014722 Ribosomal protein L2, domain 2 LOS88_06090 IPR012340 Nucleic acid-binding, OB-fold LOS88_06090 IPR013185 Translation elongation factor, KOW-like LOS88_06100 IPR013785 Aldolase-type TIM barrel LOS88_06100 IPR005993 GMP reductase LOS88_06100 IPR015875 IMP dehydrogenase / GMP reductase, conserved site LOS88_06100 IPR001093 IMP dehydrogenase/GMP reductase LOS88_06120 IPR013727 Two-component sensor kinase, N-terminal LOS88_06120 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_06120 IPR003660 HAMP domain LOS88_06120 IPR005467 Histidine kinase domain LOS88_06120 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_06120 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_06120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_06120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_06125 IPR039420 Transcriptional regulatory protein WalR-like LOS88_06125 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_06125 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_06125 IPR011006 CheY-like superfamily LOS88_06125 IPR001789 Signal transduction response regulator, receiver domain LOS88_06125 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_06135 IPR036291 NAD(P)-binding domain superfamily LOS88_06135 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_06135 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_06145 IPR020845 AMP-binding, conserved site LOS88_06145 IPR000873 AMP-dependent synthetase/ligase LOS88_06145 IPR042099 AMP-dependent synthetase-like superfamily LOS88_06160 IPR006076 FAD dependent oxidoreductase LOS88_06160 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_06170 IPR009057 Homeobox-like domain superfamily LOS88_06170 IPR001647 DNA-binding HTH domain, TetR-type LOS88_06170 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal LOS88_06170 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LOS88_06175 IPR009351 Protein of unknown function DUF1006 LOS88_06185 IPR008007 Peptidase M42 LOS88_06185 IPR011650 Peptidase M20, dimerisation domain LOS88_06185 IPR002933 Peptidase M20 LOS88_06185 IPR010162 Peptidase M20B, peptidase T-like LOS88_06185 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_06185 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LOS88_06190 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_06195 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_06200 IPR003418 Fumarate reductase, subunit D LOS88_06200 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LOS88_06205 IPR003510 Fumarate reductase, subunit C LOS88_06205 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LOS88_06210 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal LOS88_06210 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_06210 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_06210 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LOS88_06210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_06210 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_06210 IPR012675 Beta-grasp domain superfamily LOS88_06210 IPR009051 Alpha-helical ferredoxin LOS88_06210 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein LOS88_06215 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LOS88_06215 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_06215 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site LOS88_06215 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LOS88_06215 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit LOS88_06215 IPR005884 Fumarate reductase, flavoprotein subunit LOS88_06215 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LOS88_06215 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LOS88_06220 IPR003660 HAMP domain LOS88_06220 IPR029151 Periplasmic sensor-like domain superfamily LOS88_06220 IPR000727 Target SNARE coiled-coil homology domain LOS88_06220 IPR004090 Chemotaxis methyl-accepting receptor LOS88_06220 IPR033479 Double Cache domain 1 LOS88_06220 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_06225 IPR030395 Glycerophosphodiester phosphodiesterase domain LOS88_06225 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LOS88_06230 IPR024393 Mechanosensitive ion channel MscS, porin domain LOS88_06230 IPR010920 LSM domain superfamily LOS88_06230 IPR006685 Mechanosensitive ion channel MscS LOS88_06230 IPR011066 Mechanosensitive ion channel MscS, C-terminal LOS88_06230 IPR006686 Mechanosensitive ion channel MscS, conserved site LOS88_06230 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LOS88_06230 IPR023408 Mechanosensitive ion channel MscS domain superfamily LOS88_06230 IPR025692 Mechanosensitive ion channel inner membrane domain 1 LOS88_06240 IPR011055 Duplicated hybrid motif LOS88_06240 IPR018392 LysM domain LOS88_06240 IPR013731 Opacity-associated protein A, N-terminal LOS88_06240 IPR016047 Peptidase M23 LOS88_06250 IPR036390 Winged helix DNA-binding domain superfamily LOS88_06250 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_06250 IPR000847 Transcription regulator HTH, LysR LOS88_06250 IPR005119 LysR, substrate-binding LOS88_06265 IPR003660 HAMP domain LOS88_06265 IPR004090 Chemotaxis methyl-accepting receptor LOS88_06265 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_06270 IPR036390 Winged helix DNA-binding domain superfamily LOS88_06270 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_06270 IPR000847 Transcription regulator HTH, LysR LOS88_06270 IPR005119 LysR, substrate-binding LOS88_06275 IPR036950 Penicillin binding protein transglycosylase domain LOS88_06275 IPR012338 Beta-lactamase/transpeptidase-like LOS88_06275 IPR031376 Penicillin-binding protein, OB-like domain LOS88_06275 IPR001460 Penicillin-binding protein, transpeptidase LOS88_06275 IPR001264 Glycosyl transferase, family 51 LOS88_06275 IPR023346 Lysozyme-like domain superfamily LOS88_06280 IPR005883 Type IV pilus assembly protein PilM LOS88_06280 IPR003494 SHS2 domain inserted in FtsA LOS88_06300 IPR021731 AMIN domain LOS88_06300 IPR001775 GspD/PilQ family LOS88_06300 IPR038591 NolW-like superfamily LOS88_06300 IPR004845 Type II secretion system GspD, conserved site LOS88_06300 IPR004846 Type II/III secretion system LOS88_06300 IPR011662 Secretin/TonB, short N-terminal domain LOS88_06300 IPR013355 Type IV pilus secretin PilQ LOS88_06300 IPR005644 NolW-like LOS88_06305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_06305 IPR031322 Shikimate kinase/gluconokinase LOS88_06305 IPR000623 Shikimate kinase/Threonine synthase-like 1 LOS88_06305 IPR023000 Shikimate kinase, conserved site LOS88_06310 IPR016037 3-dehydroquinate synthase AroB LOS88_06310 IPR030963 3-dehydroquinate synthase family LOS88_06310 IPR030960 3-dehydroquinate synthase domain LOS88_06320 IPR012263 Adenine modification methylase, M.EcoRV-type LOS88_06320 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_06320 IPR012327 D12 class N6 adenine-specific DNA methyltransferase LOS88_06320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_06320 IPR023095 Adenine-specific methyltransferase, domain 2 LOS88_06325 IPR013785 Aldolase-type TIM barrel LOS88_06325 IPR026019 Ribulose-phosphate 3-epimerase LOS88_06325 IPR000056 Ribulose-phosphate 3-epimerase-like LOS88_06325 IPR011060 Ribulose-phosphate binding barrel LOS88_06330 IPR037512 Phosphoglycolate phosphatase, prokaryotic LOS88_06330 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LOS88_06330 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_06330 IPR006439 HAD hydrolase, subfamily IA LOS88_06330 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_06330 IPR036412 HAD-like superfamily LOS88_06330 IPR023214 HAD superfamily LOS88_06335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_06335 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_06335 IPR002305 Aminoacyl-tRNA synthetase, class Ic LOS88_06335 IPR024109 Tryptophan-tRNA ligase, bacterial-type LOS88_06335 IPR002306 Tryptophan-tRNA ligase LOS88_06345 IPR029062 Class I glutamine amidotransferase-like LOS88_06345 IPR017926 Glutamine amidotransferase LOS88_06345 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain LOS88_06350 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria LOS88_06350 IPR004636 Acetylornithine/Succinylornithine transaminase family LOS88_06350 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_06350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_06350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_06350 IPR005814 Aminotransferase class-III LOS88_06355 IPR007041 Arginine N-succinyltransferase AstA/AruG LOS88_06355 IPR016181 Acyl-CoA N-acyltransferase LOS88_06355 IPR017650 Arginine N-succinyltransferase LOS88_06360 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_06360 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_06360 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LOS88_06360 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_06360 IPR015590 Aldehyde dehydrogenase domain LOS88_06360 IPR017649 Succinylglutamate-semialdehyde dehydrogenase LOS88_06360 IPR016160 Aldehyde dehydrogenase, cysteine active site LOS88_06375 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_06375 IPR023214 HAD superfamily LOS88_06375 IPR036412 HAD-like superfamily LOS88_06375 IPR006439 HAD hydrolase, subfamily IA LOS88_06375 IPR010976 Beta-phosphoglucomutase hydrolase LOS88_06375 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_06380 IPR004638 Drug resistance transporter EmrB-like LOS88_06380 IPR011701 Major facilitator superfamily LOS88_06380 IPR020846 Major facilitator superfamily domain LOS88_06380 IPR036259 MFS transporter superfamily LOS88_06385 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II LOS88_06385 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain LOS88_06385 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_06385 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_06385 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily LOS88_06385 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain LOS88_06385 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal LOS88_06385 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LOS88_06385 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LOS88_06385 IPR029061 Thiamin diphosphate-binding fold LOS88_06385 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain LOS88_06385 IPR011895 Pyruvate-flavodoxin oxidoreductase LOS88_06390 IPR017853 Glycoside hydrolase superfamily LOS88_06390 IPR032091 Maltogenic Amylase, C-terminal LOS88_06390 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_06390 IPR013780 Glycosyl hydrolase, all-beta LOS88_06400 IPR015947 PUA-like superfamily LOS88_06400 IPR007374 ASCH domain LOS88_06400 IPR008314 Uncharacterised conserved protein UCP029143 LOS88_06410 IPR018016 Nucleoside phosphorylase, conserved site LOS88_06410 IPR000845 Nucleoside phosphorylase domain LOS88_06410 IPR035994 Nucleoside phosphorylase superfamily LOS88_06410 IPR010058 Uridine phosphorylase LOS88_06415 IPR006419 Nicotinamide mononucleotide transporter PnuC LOS88_06420 IPR031312 Sodium/sulphate symporter, conserved site LOS88_06420 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LOS88_06420 IPR006037 Regulator of K+ conductance, C-terminal LOS88_06420 IPR004680 Citrate transporter-like domain LOS88_06465 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 LOS88_06465 IPR012675 Beta-grasp domain superfamily LOS88_06465 IPR012676 TGS-like LOS88_06465 IPR006073 GTP binding domain LOS88_06465 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_06465 IPR004095 TGS LOS88_06465 IPR023192 TGS-like domain superfamily LOS88_06465 IPR041706 YchF, N-terminal LOS88_06465 IPR013029 YchF, C-terminal domain LOS88_06465 IPR031167 OBG-type guanine nucleotide-binding (G) domain LOS88_06470 IPR036416 Peptidyl-tRNA hydrolase superfamily LOS88_06470 IPR018171 Peptidyl-tRNA hydrolase, conserved site LOS88_06470 IPR001328 Peptidyl-tRNA hydrolase LOS88_06475 IPR006146 5'-Nucleotidase, conserved site LOS88_06475 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LOS88_06475 IPR029052 Metallo-dependent phosphatase-like LOS88_06475 IPR008334 5'-Nucleotidase, C-terminal LOS88_06475 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN LOS88_06475 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LOS88_06475 IPR006179 5'-Nucleotidase/apyrase LOS88_06480 IPR029057 Phosphoribosyltransferase-like LOS88_06480 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site LOS88_06480 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain LOS88_06480 IPR000836 Phosphoribosyltransferase domain LOS88_06480 IPR005946 Ribose-phosphate pyrophosphokinase LOS88_06480 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type LOS88_06490 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase LOS88_06490 IPR013750 GHMP kinase, C-terminal domain LOS88_06490 IPR036554 GHMP kinase, C-terminal domain superfamily LOS88_06490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_06490 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_06490 IPR006204 GHMP kinase N-terminal domain LOS88_06495 IPR029046 Lipoprotein localisation LolA/LolB/LppX LOS88_06495 IPR004565 Outer membrane lipoprotein LolB LOS88_06500 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase LOS88_06500 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain LOS88_06500 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal LOS88_06500 IPR018214 Glutamyl-tRNA reductase, conserved site LOS88_06500 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily LOS88_06500 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily LOS88_06500 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LOS88_06500 IPR036291 NAD(P)-binding domain superfamily LOS88_06505 IPR000352 Peptide chain release factor class I LOS88_06505 IPR005139 Peptide chain release factor LOS88_06505 IPR004373 Peptide chain release factor 1 LOS88_06510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_06510 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific LOS88_06510 IPR025714 Methyltransferase domain LOS88_06510 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_06510 IPR004556 Methyltransferase HemK-like LOS88_06510 IPR040758 Release factor glutamine methyltransferase, N-terminal domain LOS88_06520 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_06520 IPR032698 Protein SirB1, N-terminal LOS88_06525 IPR006269 3-deoxy-8-phosphooctulonate synthase LOS88_06525 IPR006218 DAHP synthetase I/KDSA LOS88_06525 IPR013785 Aldolase-type TIM barrel LOS88_06530 IPR023954 C4-dicarboxylate transport protein LOS88_06530 IPR018107 Sodium:dicarboxylate symporter, conserved site LOS88_06530 IPR001991 Sodium:dicarboxylate symporter LOS88_06530 IPR036458 Sodium:dicarboxylate symporter superfamily LOS88_06535 IPR001150 Glycine radical domain LOS88_06535 IPR011140 Autonomous glycyl radical cofactor GrcA LOS88_06535 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LOS88_06545 IPR005122 Uracil-DNA glycosylase-like LOS88_06545 IPR036895 Uracil-DNA glycosylase-like domain superfamily LOS88_06545 IPR002043 Uracil-DNA glycosylase family 1 LOS88_06545 IPR018085 Uracil-DNA glycosylase, active site LOS88_06560 IPR005247 YbhB/YbcL LOS88_06560 IPR036610 PEBP-like superfamily LOS88_06560 IPR008914 Phosphatidylethanolamine-binding protein LOS88_06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_06565 IPR001114 Adenylosuccinate synthetase LOS88_06565 IPR042111 Adenylosuccinate synthetase, domain 3 LOS88_06565 IPR042110 Adenylosuccinate synthetase, domain 2 LOS88_06565 IPR042109 Adenylosuccinate synthetase, domain 1 LOS88_06580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_06580 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_06580 IPR004839 Aminotransferase, class I/classII LOS88_06580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_06580 IPR027619 Putative C-S lyase LOS88_06585 IPR020846 Major facilitator superfamily domain LOS88_06585 IPR011701 Major facilitator superfamily LOS88_06585 IPR004750 Sugar efflux LOS88_06585 IPR036259 MFS transporter superfamily LOS88_06590 IPR005119 LysR, substrate-binding LOS88_06590 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_06590 IPR036390 Winged helix DNA-binding domain superfamily LOS88_06590 IPR000847 Transcription regulator HTH, LysR LOS88_06595 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_06595 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_06595 IPR036291 NAD(P)-binding domain superfamily LOS88_06600 IPR029045 ClpP/crotonase-like domain superfamily LOS88_06600 IPR002142 Peptidase S49 LOS88_06600 IPR013703 Peptidase S49, N-terminal proteobacteria LOS88_06605 IPR020846 Major facilitator superfamily domain LOS88_06605 IPR036259 MFS transporter superfamily LOS88_06605 IPR005829 Sugar transporter, conserved site LOS88_06605 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LOS88_06605 IPR011701 Major facilitator superfamily LOS88_06610 IPR029787 Nucleotide cyclase LOS88_06610 IPR009050 Globin-like superfamily LOS88_06610 IPR039435 Diguanylate cyclase DosC, globin sensor domain LOS88_06610 IPR012292 Globin/Protoglobin LOS88_06610 IPR000160 GGDEF domain LOS88_06615 IPR027396 DsrEFH-like LOS88_06615 IPR003787 Sulphur relay, DsrE/F-like protein LOS88_06625 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_06625 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_06630 IPR001539 Peptidase U32 LOS88_06630 IPR032525 Peptidase family U32, C-terminal LOS88_06640 IPR001789 Signal transduction response regulator, receiver domain LOS88_06640 IPR011006 CheY-like superfamily LOS88_06640 IPR035909 Methylesterase CheB, C-terminal LOS88_06640 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type LOS88_06640 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase LOS88_06655 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase LOS88_06655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_06655 IPR013656 PAS fold-4 LOS88_06655 IPR035965 PAS domain superfamily LOS88_06655 IPR000014 PAS domain LOS88_06655 IPR000780 MCP methyltransferase, CheR-type LOS88_06655 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LOS88_06655 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LOS88_06655 IPR035909 Methylesterase CheB, C-terminal LOS88_06660 IPR029787 Nucleotide cyclase LOS88_06660 IPR005330 MHYT domain LOS88_06660 IPR000160 GGDEF domain LOS88_06660 IPR035919 EAL domain superfamily LOS88_06660 IPR001633 EAL domain LOS88_06665 IPR009057 Homeobox-like domain superfamily LOS88_06665 IPR001584 Integrase, catalytic core LOS88_06665 IPR012337 Ribonuclease H-like superfamily LOS88_06665 IPR036397 Ribonuclease H superfamily LOS88_06665 IPR001598 Transposase, IS30, conserved site LOS88_06690 IPR029016 GAF-like domain superfamily LOS88_06690 IPR035965 PAS domain superfamily LOS88_06690 IPR000700 PAS-associated, C-terminal LOS88_06690 IPR000014 PAS domain LOS88_06690 IPR001610 PAC motif LOS88_06690 IPR013767 PAS fold LOS88_06690 IPR029787 Nucleotide cyclase LOS88_06690 IPR000160 GGDEF domain LOS88_06690 IPR035919 EAL domain superfamily LOS88_06690 IPR001633 EAL domain LOS88_06690 IPR003018 GAF domain LOS88_06695 IPR012337 Ribonuclease H-like superfamily LOS88_06695 IPR036397 Ribonuclease H superfamily LOS88_06695 IPR009057 Homeobox-like domain superfamily LOS88_06695 IPR001584 Integrase, catalytic core LOS88_06695 IPR001598 Transposase, IS30, conserved site LOS88_06700 IPR012337 Ribonuclease H-like superfamily LOS88_06700 IPR036397 Ribonuclease H superfamily LOS88_06700 IPR001584 Integrase, catalytic core LOS88_06700 IPR009057 Homeobox-like domain superfamily LOS88_06700 IPR001598 Transposase, IS30, conserved site LOS88_06720 IPR003593 AAA+ ATPase domain LOS88_06720 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_06720 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_06720 IPR002611 IstB-like ATP-binding protein LOS88_06765 IPR001126 UmuC domain LOS88_06765 IPR024728 DNA polymerase type-Y, HhH motif LOS88_06765 IPR025188 Domain of unknown function DUF4113 LOS88_06765 IPR017961 DNA polymerase, Y-family, little finger domain LOS88_06765 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LOS88_06775 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LOS88_06775 IPR017961 DNA polymerase, Y-family, little finger domain LOS88_06775 IPR025188 Domain of unknown function DUF4113 LOS88_06775 IPR001126 UmuC domain LOS88_06795 IPR006657 Molybdopterin dinucleotide-binding domain LOS88_06795 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding LOS88_06795 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LOS88_06795 IPR006656 Molybdopterin oxidoreductase LOS88_06795 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_06795 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_06795 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_06795 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_06795 IPR009010 Aspartate decarboxylase-like domain superfamily LOS88_06795 IPR041924 Formate dehydrogenase H, N-terminal LOS88_06795 IPR006478 Formate dehydrogenase, alpha subunit LOS88_06800 IPR029787 Nucleotide cyclase LOS88_06800 IPR000160 GGDEF domain LOS88_06800 IPR005330 MHYT domain LOS88_06800 IPR001633 EAL domain LOS88_06800 IPR035919 EAL domain superfamily LOS88_06805 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_06805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_06805 IPR005467 Histidine kinase domain LOS88_06805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_06805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_06805 IPR030856 Sensor histidine kinase RcsC LOS88_06805 IPR038388 RcsC, C-terminal domain superfamily LOS88_06805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_06805 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal LOS88_06805 IPR001789 Signal transduction response regulator, receiver domain LOS88_06805 IPR011006 CheY-like superfamily LOS88_06820 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LOS88_06820 IPR017961 DNA polymerase, Y-family, little finger domain LOS88_06820 IPR025188 Domain of unknown function DUF4113 LOS88_06820 IPR024728 DNA polymerase type-Y, HhH motif LOS88_06820 IPR001126 UmuC domain LOS88_06825 IPR015927 Peptidase S24/S26A/S26B/S26C LOS88_06825 IPR039418 LexA-like LOS88_06825 IPR036286 LexA/Signal peptidase-like superfamily LOS88_06825 IPR006197 Peptidase S24, LexA-like LOS88_06840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_06840 IPR004546 Restriction endonuclease, type I, HsdM LOS88_06840 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_06840 IPR003356 DNA methylase, adenine-specific LOS88_06840 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily LOS88_06840 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain LOS88_06850 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_06855 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain LOS88_06855 IPR038475 RecG, C-terminal domain superfamily LOS88_06855 IPR033454 RecG, wedge domain LOS88_06855 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_06855 IPR011545 DEAD/DEAH box helicase domain LOS88_06855 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_06855 IPR012340 Nucleic acid-binding, OB-fold LOS88_06860 IPR004473 Restriction endonuclease, type I, HsdR LOS88_06860 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal LOS88_06860 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_06860 IPR040980 SWI2/SNF2 ATPase LOS88_06860 IPR021810 Protein of unknown function DUF3387 LOS88_06860 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_06870 IPR025745 Restriction system protein Mrr-like N-terminal domain LOS88_06870 IPR011335 Restriction endonuclease type II-like LOS88_06870 IPR007560 Restriction endonuclease type IV, Mrr LOS88_06875 IPR038025 Antitoxin CbeA superfamily LOS88_06875 IPR009320 Antitoxin CbeA LOS88_06925 IPR020891 Uncharacterised protein family UPF0758, conserved site LOS88_06925 IPR001405 Uncharacterised protein family UPF0758 LOS88_06925 IPR025657 RadC-like JAB domain LOS88_06925 IPR037518 MPN domain LOS88_06970 IPR011604 Exonuclease, phage-type/RecB, C-terminal LOS88_06970 IPR017482 Putative phage-type endonuclease LOS88_06970 IPR011335 Restriction endonuclease type II-like LOS88_06970 IPR019080 YqaJ viral recombinase LOS88_06980 IPR009057 Homeobox-like domain superfamily LOS88_06980 IPR012337 Ribonuclease H-like superfamily LOS88_06980 IPR038717 Tc1-like transposase, DDE domain LOS88_06980 IPR025959 Winged helix-turn helix domain LOS88_06985 IPR010260 DNA-binding transcriptional activator AlpA LOS88_07005 IPR010998 Integrase/recombinase, N-terminal LOS88_07005 IPR025166 Integrase, DNA-binding domain LOS88_07005 IPR038488 Integrase, DNA-binding domain superfamily LOS88_07005 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_07005 IPR013762 Integrase-like, catalytic domain superfamily LOS88_07005 IPR002104 Integrase, catalytic domain LOS88_07015 IPR023620 Small protein B LOS88_07015 IPR000037 SsrA-binding protein LOS88_07015 IPR020081 SsrA-binding protein, conserved site LOS88_07020 IPR023393 START-like domain superfamily LOS88_07020 IPR005031 Coenzyme Q-binding protein COQ10, START domain LOS88_07025 IPR037021 RnfH superfamily LOS88_07025 IPR005346 RnfH protein LOS88_07025 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LOS88_07030 IPR033845 p-Aminobenzoyl-glutamate hydrolase subunit A LOS88_07030 IPR017439 Amidohydrolase LOS88_07030 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_07030 IPR002933 Peptidase M20 LOS88_07030 IPR011650 Peptidase M20, dimerisation domain LOS88_07035 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LOS88_07035 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LOS88_07035 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LOS88_07035 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LOS88_07035 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LOS88_07035 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LOS88_07035 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type LOS88_07040 IPR004515 Phosphoheptose isomerase LOS88_07040 IPR035461 GmhA/DiaA LOS88_07040 IPR001347 Sugar isomerase (SIS) LOS88_07045 IPR029055 Nucleophile aminohydrolases, N-terminal LOS88_07045 IPR017932 Glutamine amidotransferase type 2 domain LOS88_07045 IPR026869 Putative glutamine amidotransferase type 2 LOS88_07060 IPR025668 Transposase DDE domain LOS88_07075 IPR011006 CheY-like superfamily LOS88_07075 IPR001789 Signal transduction response regulator, receiver domain LOS88_07075 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal LOS88_07075 IPR030856 Sensor histidine kinase RcsC LOS88_07075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_07075 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_07075 IPR005467 Histidine kinase domain LOS88_07075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_07075 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_07075 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_07075 IPR038388 RcsC, C-terminal domain superfamily LOS88_07085 IPR011006 CheY-like superfamily LOS88_07085 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_07085 IPR001789 Signal transduction response regulator, receiver domain LOS88_07085 IPR000792 Transcription regulator LuxR, C-terminal LOS88_07090 IPR042295 NarX-like, N-terminal domain superfamily LOS88_07090 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LOS88_07090 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing LOS88_07090 IPR005467 Histidine kinase domain LOS88_07090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_07090 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_07090 IPR003660 HAMP domain LOS88_07090 IPR029095 NarX-like, N-terminal LOS88_07095 IPR013785 Aldolase-type TIM barrel LOS88_07095 IPR006638 Elp3/MiaB/NifB LOS88_07095 IPR013483 Molybdenum cofactor biosynthesis protein A LOS88_07095 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site LOS88_07095 IPR010505 Molybdenum cofactor synthesis C-terminal LOS88_07095 IPR007197 Radical SAM LOS88_07100 IPR004496 Ferredoxin-type protein NapF LOS88_07100 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_07100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_07110 IPR009010 Aspartate decarboxylase-like domain superfamily LOS88_07110 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain LOS88_07110 IPR006657 Molybdopterin dinucleotide-binding domain LOS88_07110 IPR006311 Twin-arginine translocation pathway, signal sequence LOS88_07110 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LOS88_07110 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site LOS88_07110 IPR010051 Periplasmic nitrate reductase, large subunit LOS88_07110 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LOS88_07110 IPR006656 Molybdopterin oxidoreductase LOS88_07115 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_07115 IPR004494 MauM/NapG ferredoxin-type protein LOS88_07115 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LOS88_07115 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_07120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_07120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_07120 IPR011886 Ferredoxin-type protein, NapH/MauN family LOS88_07125 IPR011031 Multihaem cytochrome LOS88_07125 IPR036280 Multiheme cytochrome superfamily LOS88_07125 IPR005591 Nitrate reductase cytochrome c-type subunit NapB LOS88_07130 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT LOS88_07130 IPR038266 NapC/NirT cytochrome c superfamily LOS88_07130 IPR005126 NapC/NirT cytochrome c, N-terminal LOS88_07130 IPR036280 Multiheme cytochrome superfamily LOS88_07130 IPR011031 Multihaem cytochrome LOS88_07130 IPR024717 Denitrification system component NapC/NirT/NrfH LOS88_07135 IPR012245 Molybdenum cofactor biosynthesis protein MoaB LOS88_07135 IPR036425 MoaB/Mog-like domain superfamily LOS88_07135 IPR001453 MoaB/Mog domain LOS88_07135 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria LOS88_07135 IPR008284 Molybdenum cofactor biosynthesis, conserved site LOS88_07140 IPR023045 Molybdenum cofactor biosynthesis C LOS88_07140 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily LOS88_07140 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain LOS88_07145 IPR003749 Sulfur carrier ThiS/MoaD-like LOS88_07145 IPR012675 Beta-grasp domain superfamily LOS88_07145 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LOS88_07150 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily LOS88_07150 IPR003448 Molybdopterin biosynthesis MoaE LOS88_07155 IPR005950 Molybdate ABC transporter, substrate-binding protein LOS88_07160 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_07160 IPR035906 MetI-like superfamily LOS88_07160 IPR011867 Molybdate ABC transporter, permease protein LOS88_07165 IPR005116 Transport-associated OB, type 1 LOS88_07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_07165 IPR004606 Molybdenum-pterin binding LOS88_07165 IPR011868 Molybdate ABC transporter, ATP-binding protein LOS88_07165 IPR017871 ABC transporter, conserved site LOS88_07165 IPR003439 ABC transporter-like LOS88_07165 IPR003593 AAA+ ATPase domain LOS88_07165 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_07165 IPR015852 ABC transporter, molybdenum import, ModC LOS88_07170 IPR029058 Alpha/Beta hydrolase fold LOS88_07170 IPR000073 Alpha/beta hydrolase fold-1 LOS88_07170 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase LOS88_07175 IPR012730 Molybdopterin synthase sulfurylase MoeB LOS88_07175 IPR000594 THIF-type NAD/FAD binding fold LOS88_07175 IPR035985 Ubiquitin-activating enzyme LOS88_07180 IPR008284 Molybdenum cofactor biosynthesis, conserved site LOS88_07180 IPR036425 MoaB/Mog-like domain superfamily LOS88_07180 IPR001453 MoaB/Mog domain LOS88_07180 IPR038987 Molybdopterin biosynthesis protein MoeA-like LOS88_07180 IPR005111 MoeA, C-terminal, domain IV LOS88_07180 IPR036688 MoeA, C-terminal, domain IV superfamily LOS88_07180 IPR005110 MoeA, N-terminal and linker domain LOS88_07180 IPR036135 MoeA, N-terminal and linker domain superfamily LOS88_07185 IPR018234 GTP cyclohydrolase I, conserved site LOS88_07185 IPR020602 GTP cyclohydrolase I domain LOS88_07185 IPR001474 GTP cyclohydrolase I LOS88_07190 IPR004090 Chemotaxis methyl-accepting receptor LOS88_07190 IPR003660 HAMP domain LOS88_07190 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_07190 IPR033480 Single Cache domain 2 LOS88_07195 IPR000559 Formate-tetrahydrofolate ligase, FTHFS LOS88_07195 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site LOS88_07195 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_07205 IPR036390 Winged helix DNA-binding domain superfamily LOS88_07205 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_07205 IPR000847 Transcription regulator HTH, LysR LOS88_07205 IPR005119 LysR, substrate-binding LOS88_07210 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LOS88_07210 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily LOS88_07210 IPR023480 Uncharacterised protein family UPF0312/YceI LOS88_07220 IPR036291 NAD(P)-binding domain superfamily LOS88_07220 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LOS88_07220 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site LOS88_07220 IPR042172 Adenosylhomocysteinase-like superfamily LOS88_07220 IPR000043 Adenosylhomocysteinase-like LOS88_07235 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LOS88_07235 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_07235 IPR002933 Peptidase M20 LOS88_07235 IPR011650 Peptidase M20, dimerisation domain LOS88_07235 IPR010161 Peptidase M20B, tripeptide aminopeptidase LOS88_07240 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LOS88_07240 IPR000183 Ornithine/DAP/Arg decarboxylase LOS88_07240 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LOS88_07240 IPR029066 PLP-binding barrel LOS88_07240 IPR041128 Arginine decarboxylase, C-terminal helical LOS88_07240 IPR040634 Arginine decarboxylase, helical bundle domain LOS88_07240 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LOS88_07240 IPR002985 Arginine decarboxylase LOS88_07250 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily LOS88_07250 IPR029229 Alkyl sulfatase, C-terminal LOS88_07250 IPR029228 Alkyl sulfatase dimerisation domain LOS88_07250 IPR001279 Metallo-beta-lactamase LOS88_07250 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LOS88_07250 IPR036527 SCP2 sterol-binding domain superfamily LOS88_07265 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_07265 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_07265 IPR000727 Target SNARE coiled-coil homology domain LOS88_07265 IPR004090 Chemotaxis methyl-accepting receptor LOS88_07265 IPR003660 HAMP domain LOS88_07275 IPR006056 RidA family LOS88_07275 IPR019897 RidA, conserved site LOS88_07275 IPR035959 RutC-like superfamily LOS88_07275 IPR006175 YjgF/YER057c/UK114 family LOS88_07280 IPR005130 Serine dehydratase-like, alpha subunit LOS88_07280 IPR021144 Uncharacterised protein family UPF0597 LOS88_07285 IPR039446 Transcriptional regulator DauR-like LOS88_07285 IPR039445 Transcriptional regulator DauR-like, HTH domain LOS88_07285 IPR013559 YheO-like LOS88_07290 IPR023086 Phosphoglycerate mutase, GpmB, probable LOS88_07290 IPR013078 Histidine phosphatase superfamily, clade-1 LOS88_07290 IPR029033 Histidine phosphatase superfamily LOS88_07290 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site LOS88_07295 IPR004090 Chemotaxis methyl-accepting receptor LOS88_07295 IPR003660 HAMP domain LOS88_07295 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_07295 IPR000727 Target SNARE coiled-coil homology domain LOS88_07295 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_07300 IPR010758 Trans-2-enoyl-CoA reductase LOS88_07300 IPR024906 Enoyl reductase FAD binding domain LOS88_07300 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative LOS88_07305 IPR018385 C4-dicarboxylate anaerobic carrier-like LOS88_07310 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_07310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_07310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_07310 IPR004839 Aminotransferase, class I/classII LOS88_07320 IPR023271 Aquaporin-like LOS88_07320 IPR022357 Major intrinsic protein, conserved site LOS88_07320 IPR034294 Aquaporin transporter LOS88_07320 IPR023743 Aquaporin Z LOS88_07320 IPR000425 Major intrinsic protein LOS88_07325 IPR011055 Duplicated hybrid motif LOS88_07325 IPR023346 Lysozyme-like domain superfamily LOS88_07325 IPR016047 Peptidase M23 LOS88_07325 IPR010090 Phage tail tape measure protein LOS88_07325 IPR000189 Prokaryotic transglycosylase, active site LOS88_07325 IPR008258 Transglycosylase SLT domain 1 LOS88_07340 IPR025202 Phospholipase D-like domain LOS88_07340 IPR022924 Cardiolipin synthase LOS88_07340 IPR030840 Cardiolipin synthase A LOS88_07340 IPR027379 Cardiolipin synthase N-terminal LOS88_07340 IPR001736 Phospholipase D/Transphosphatidylase LOS88_07350 IPR004810 Formyltetrahydrofolate deformylase LOS88_07350 IPR036477 Formyl transferase, N-terminal domain superfamily LOS88_07350 IPR002376 Formyl transferase, N-terminal LOS88_07350 IPR002912 ACT domain LOS88_07350 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain LOS88_07355 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LOS88_07355 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB LOS88_07365 IPR013766 Thioredoxin domain LOS88_07365 IPR036249 Thioredoxin-like superfamily LOS88_07365 IPR005746 Thioredoxin LOS88_07365 IPR017937 Thioredoxin, conserved site LOS88_07370 IPR037143 4'-phosphopantetheinyl transferase domain superfamily LOS88_07370 IPR008278 4'-phosphopantetheinyl transferase domain LOS88_07375 IPR038765 Papain-like cysteine peptidase superfamily LOS88_07375 IPR000064 Endopeptidase, NLPC/P60 domain LOS88_07380 IPR010286 METTL16/RlmF family LOS88_07380 IPR016909 Ribosomal RNA large subunit methyltransferase F LOS88_07380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_07385 IPR029069 HotDog domain superfamily LOS88_07385 IPR002539 MaoC-like dehydratase domain LOS88_07385 IPR039375 Nodulation protein N-like LOS88_07390 IPR001898 Solute carrier family 13 LOS88_07390 IPR031312 Sodium/sulphate symporter, conserved site LOS88_07410 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_07410 IPR001347 Sugar isomerase (SIS) LOS88_07410 IPR035472 RpiR-like, SIS domain LOS88_07410 IPR009057 Homeobox-like domain superfamily LOS88_07410 IPR000281 Helix-turn-helix protein RpiR LOS88_07415 IPR001996 Phosphotransferase system, IIB component, type 1 LOS88_07415 IPR003352 Phosphotransferase system, EIIC LOS88_07415 IPR013013 Phosphotransferase system, EIIC component, type 1 LOS88_07415 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LOS88_07415 IPR011299 PTS system glucose-specific IIBC component LOS88_07415 IPR036878 Glucose permease domain IIB LOS88_07415 IPR011055 Duplicated hybrid motif LOS88_07415 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LOS88_07415 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LOS88_07420 IPR013785 Aldolase-type TIM barrel LOS88_07420 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase LOS88_07420 IPR011060 Ribulose-phosphate binding barrel LOS88_07425 IPR036255 YgfB-like superfamily LOS88_07425 IPR011978 Uncharacterised protein family UPF0149 LOS88_07425 IPR004027 SEC-C motif LOS88_07430 IPR008638 Filamentous haemagglutinin, N-terminal LOS88_07430 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LOS88_07430 IPR006914 VENN motif-containing domain LOS88_07430 IPR025157 Hemagglutinin repeat LOS88_07430 IPR012334 Pectin lyase fold LOS88_07430 IPR011050 Pectin lyase fold/virulence factor LOS88_07445 IPR025668 Transposase DDE domain LOS88_07450 IPR032806 H repeat-associated protein, N-terminal LOS88_07450 IPR002559 Transposase, IS4-like LOS88_07455 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LOS88_07455 IPR001036 Acriflavin resistance protein LOS88_07455 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_07460 IPR006143 RND efflux pump, membrane fusion protein LOS88_07460 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_07465 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_07465 IPR001789 Signal transduction response regulator, receiver domain LOS88_07465 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_07465 IPR039420 Transcriptional regulatory protein WalR-like LOS88_07465 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_07465 IPR011006 CheY-like superfamily LOS88_07470 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_07470 IPR003660 HAMP domain LOS88_07470 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_07470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_07470 IPR005467 Histidine kinase domain LOS88_07470 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_07470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_07475 IPR007527 Zinc finger, SWIM-type LOS88_07475 IPR000330 SNF2-related, N-terminal domain LOS88_07475 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_07475 IPR001650 Helicase, C-terminal LOS88_07475 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_07475 IPR038718 SNF2-like, N-terminal domain superfamily LOS88_07480 IPR036381 Replication terminator Tus, domain 1 LOS88_07480 IPR008865 DNA replication terminus site-binding protein LOS88_07480 IPR036384 Replication terminator Tus superfamily LOS88_07490 IPR016681 Succinylglutamate desuccinylase LOS88_07490 IPR007036 Succinylglutamate desuccinylase/aspartoacylase LOS88_07495 IPR036779 LysM domain superfamily LOS88_07495 IPR018392 LysM domain LOS88_07495 IPR023346 Lysozyme-like domain superfamily LOS88_07495 IPR008258 Transglycosylase SLT domain 1 LOS88_07495 IPR000189 Prokaryotic transglycosylase, active site LOS88_07500 IPR017782 Hydroxyacylglutathione hydrolase LOS88_07500 IPR001279 Metallo-beta-lactamase LOS88_07500 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain LOS88_07500 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LOS88_07500 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain LOS88_07505 IPR013216 Methyltransferase type 11 LOS88_07505 IPR026669 Arsenite methyltransferase-like LOS88_07505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_07510 IPR036397 Ribonuclease H superfamily LOS88_07510 IPR022892 Ribonuclease HI LOS88_07510 IPR002156 Ribonuclease H domain LOS88_07510 IPR012337 Ribonuclease H-like superfamily LOS88_07515 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain LOS88_07515 IPR006309 DNA polymerase 3, epsilon subunit LOS88_07515 IPR013520 Exonuclease, RNase T/DNA polymerase III LOS88_07515 IPR012337 Ribonuclease H-like superfamily LOS88_07515 IPR036397 Ribonuclease H superfamily LOS88_07525 IPR001789 Signal transduction response regulator, receiver domain LOS88_07525 IPR003607 HD/PDEase domain LOS88_07525 IPR021800 Domain of unknown function DUF3369 LOS88_07525 IPR011006 CheY-like superfamily LOS88_07525 IPR037522 HD-GYP domain LOS88_07530 IPR009057 Homeobox-like domain superfamily LOS88_07530 IPR001584 Integrase, catalytic core LOS88_07530 IPR001598 Transposase, IS30, conserved site LOS88_07530 IPR036397 Ribonuclease H superfamily LOS88_07530 IPR012337 Ribonuclease H-like superfamily LOS88_07535 IPR039374 Siderophore-interacting protein LOS88_07535 IPR017938 Riboflavin synthase-like beta-barrel LOS88_07535 IPR013113 FAD-binding 9, siderophore-interacting LOS88_07535 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_07535 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_07535 IPR007037 Siderophore-interacting protein, C-terminal domain LOS88_07540 IPR000522 ABC transporter, permease protein, BtuC-like LOS88_07540 IPR037294 ABC transporter, BtuC-like LOS88_07545 IPR000522 ABC transporter, permease protein, BtuC-like LOS88_07545 IPR037294 ABC transporter, BtuC-like LOS88_07550 IPR003439 ABC transporter-like LOS88_07550 IPR003593 AAA+ ATPase domain LOS88_07550 IPR017871 ABC transporter, conserved site LOS88_07550 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_07555 IPR002491 ABC transporter periplasmic binding domain LOS88_07565 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA LOS88_07565 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_07565 IPR001036 Acriflavin resistance protein LOS88_07570 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_07570 IPR006143 RND efflux pump, membrane fusion protein LOS88_07580 IPR042117 OMPP1/FadL/TodX superfamily LOS88_07580 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) LOS88_07595 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_07595 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LOS88_07595 IPR001036 Acriflavin resistance protein LOS88_07600 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_07600 IPR006143 RND efflux pump, membrane fusion protein LOS88_07605 IPR020847 AP endonuclease 1, binding site LOS88_07605 IPR020848 AP endonuclease 1, conserved site LOS88_07605 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LOS88_07605 IPR004808 AP endonuclease 1 LOS88_07605 IPR005135 Endonuclease/exonuclease/phosphatase LOS88_07605 IPR037493 Exodeoxyribonuclease III-like LOS88_07615 IPR001789 Signal transduction response regulator, receiver domain LOS88_07615 IPR039420 Transcriptional regulatory protein WalR-like LOS88_07615 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_07615 IPR011006 CheY-like superfamily LOS88_07615 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_07615 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_07620 IPR024932 Flavin transferase ApbE LOS88_07620 IPR003374 ApbE-like superfamily LOS88_07620 IPR042159 Flavin-trafficking protein ApbE LOS88_07625 IPR028871 Blue (type 1) copper protein, binding site LOS88_07625 IPR014068 Azurin LOS88_07625 IPR000923 Blue (type 1) copper domain LOS88_07625 IPR008972 Cupredoxin LOS88_07635 IPR007432 Protein of unknown function DUF480 LOS88_07635 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_07635 IPR036390 Winged helix DNA-binding domain superfamily LOS88_07640 IPR000014 PAS domain LOS88_07640 IPR035965 PAS domain superfamily LOS88_07640 IPR005330 MHYT domain LOS88_07640 IPR000160 GGDEF domain LOS88_07640 IPR035919 EAL domain superfamily LOS88_07640 IPR001633 EAL domain LOS88_07640 IPR029787 Nucleotide cyclase LOS88_07650 IPR007420 Protein of unknown function DUF465 LOS88_07650 IPR038444 DUF465 superfamily LOS88_07660 IPR002528 Multi antimicrobial extrusion protein LOS88_07680 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LOS88_07680 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LOS88_07680 IPR039697 Iron-type alcohol dehydrogenase-like LOS88_07690 IPR009057 Homeobox-like domain superfamily LOS88_07690 IPR013570 Transcription regulator YsiA, C-terminal LOS88_07690 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LOS88_07690 IPR001647 DNA-binding HTH domain, TetR-type LOS88_07695 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LOS88_07695 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_07695 IPR015590 Aldehyde dehydrogenase domain LOS88_07695 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent LOS88_07695 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_07695 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_07705 IPR036452 Ribonucleoside hydrolase-like LOS88_07705 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LOS88_07705 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LOS88_07705 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site LOS88_07705 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB LOS88_07715 IPR009056 Cytochrome c-like domain LOS88_07715 IPR036909 Cytochrome c-like domain superfamily LOS88_07715 IPR008168 Cytochrome c, class IC LOS88_07715 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit LOS88_07725 IPR008523 Protein of unknown function DUF805 LOS88_07740 IPR006327 Phosphotransferase system, fructose IIC component LOS88_07740 IPR013014 Phosphotransferase system, EIIC component, type 2 LOS88_07745 IPR008928 Six-hairpin glycosidase superfamily LOS88_07745 IPR005887 Alpha-1,2-mannosidase, putative LOS88_07745 IPR014718 Glycoside hydrolase-type carbohydrate-binding LOS88_07745 IPR041371 Glycosyl hydrolase family 92 N-terminal domain LOS88_07745 IPR012939 Glycosyl hydrolase family 92 LOS88_07760 IPR014718 Glycoside hydrolase-type carbohydrate-binding LOS88_07760 IPR041371 Glycosyl hydrolase family 92 N-terminal domain LOS88_07760 IPR008928 Six-hairpin glycosidase superfamily LOS88_07760 IPR005887 Alpha-1,2-mannosidase, putative LOS88_07760 IPR012939 Glycosyl hydrolase family 92 LOS88_07765 IPR032806 H repeat-associated protein, N-terminal LOS88_07765 IPR002559 Transposase, IS4-like LOS88_07770 IPR001598 Transposase, IS30, conserved site LOS88_07770 IPR012337 Ribonuclease H-like superfamily LOS88_07770 IPR001584 Integrase, catalytic core LOS88_07770 IPR009057 Homeobox-like domain superfamily LOS88_07770 IPR036397 Ribonuclease H superfamily LOS88_07775 IPR011051 RmlC-like cupin domain superfamily LOS88_07775 IPR014710 RmlC-like jelly roll fold LOS88_07775 IPR001250 Mannose-6-phosphate isomerase, type I LOS88_07775 IPR016305 Mannose-6-phosphate isomerase LOS88_07775 IPR018050 Phosphomannose isomerase, type I, conserved site LOS88_07780 IPR018060 DNA binding HTH domain, AraC-type LOS88_07780 IPR020449 Transcription regulator HTH, AraC- type LOS88_07780 IPR009057 Homeobox-like domain superfamily LOS88_07780 IPR018062 HTH domain AraC-type, conserved site LOS88_07785 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LOS88_07785 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic LOS88_07785 IPR024084 Isopropylmalate dehydrogenase-like domain LOS88_07795 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LOS88_07795 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LOS88_07795 IPR001926 Pyridoxal-phosphate dependent enzyme LOS88_07795 IPR011780 D-serine ammonia-lyase LOS88_07800 IPR003474 Gluconate transporter LOS88_07805 IPR036390 Winged helix DNA-binding domain superfamily LOS88_07805 IPR000847 Transcription regulator HTH, LysR LOS88_07805 IPR005119 LysR, substrate-binding LOS88_07805 IPR011781 D-serine deaminase transcriptional activator LOS88_07805 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_07815 IPR000064 Endopeptidase, NLPC/P60 domain LOS88_07815 IPR038765 Papain-like cysteine peptidase superfamily LOS88_07820 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_07820 IPR005119 LysR, substrate-binding LOS88_07820 IPR000847 Transcription regulator HTH, LysR LOS88_07820 IPR036390 Winged helix DNA-binding domain superfamily LOS88_07825 IPR019479 Peroxiredoxin, C-terminal LOS88_07825 IPR024706 Peroxiredoxin, AhpC-type LOS88_07825 IPR013766 Thioredoxin domain LOS88_07825 IPR036249 Thioredoxin-like superfamily LOS88_07825 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LOS88_07845 IPR010017 tRNA U34 carboxymethyltransferase LOS88_07845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_07845 IPR027555 tRNA (mo5U34)-methyltransferase-like LOS88_07850 IPR005271 Carboxy-S-adenosyl-L-methionine synthase LOS88_07850 IPR041698 Methyltransferase domain 25 LOS88_07850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_07855 IPR002763 Protein of unknown function DUF72 LOS88_07855 IPR036520 UPF0759 superfamily LOS88_07865 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LOS88_07865 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_07865 IPR004524 Aspartate-tRNA ligase, type 1 LOS88_07865 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb LOS88_07865 IPR004115 GAD-like domain superfamily LOS88_07865 IPR029351 GAD domain LOS88_07865 IPR012340 Nucleic acid-binding, OB-fold LOS88_07865 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LOS88_07870 IPR026564 Transcriptional regulator TACO1-like, domain 3 LOS88_07870 IPR029072 YebC-like LOS88_07870 IPR002876 Transcriptional regulator TACO1-like LOS88_07870 IPR017856 Integrase-like, N-terminal LOS88_07875 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain LOS88_07875 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LOS88_07875 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LOS88_07875 IPR039697 Iron-type alcohol dehydrogenase-like LOS88_07875 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_07875 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_07875 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_07875 IPR015590 Aldehyde dehydrogenase domain LOS88_07875 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase LOS88_07880 IPR002771 Multiple antibiotic resistance (MarC)-related LOS88_07885 IPR023765 Solute-binding protein family 5, conserved site LOS88_07885 IPR000914 Solute-binding protein family 5 domain LOS88_07885 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_07885 IPR039424 Solute-binding protein family 5 LOS88_07890 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_07890 IPR035906 MetI-like superfamily LOS88_07895 IPR035906 MetI-like superfamily LOS88_07895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_07895 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LOS88_07900 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LOS88_07900 IPR017871 ABC transporter, conserved site LOS88_07900 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_07900 IPR003439 ABC transporter-like LOS88_07900 IPR003593 AAA+ ATPase domain LOS88_07905 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_07905 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LOS88_07905 IPR017871 ABC transporter, conserved site LOS88_07905 IPR003439 ABC transporter-like LOS88_07905 IPR003593 AAA+ ATPase domain LOS88_07910 IPR005496 Integral membrane protein TerC LOS88_07910 IPR022369 Integral membrane protein TerC, riboswitch-linked LOS88_07915 IPR001608 Alanine racemase, N-terminal LOS88_07915 IPR011079 Alanine racemase, C-terminal LOS88_07915 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LOS88_07915 IPR000821 Alanine racemase LOS88_07915 IPR029066 PLP-binding barrel LOS88_07915 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site LOS88_07925 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_07925 IPR001482 Type II/IV secretion system protein LOS88_07925 IPR006321 Pilus retraction protein PilT LOS88_07940 IPR000522 ABC transporter, permease protein, BtuC-like LOS88_07940 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC LOS88_07940 IPR037294 ABC transporter, BtuC-like LOS88_07945 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_07945 IPR003439 ABC transporter-like LOS88_07945 IPR003593 AAA+ ATPase domain LOS88_07945 IPR023693 ABC transporter, vitamin B12, BtuD LOS88_07950 IPR013785 Aldolase-type TIM barrel LOS88_07950 IPR006219 DHAP synthase, class 1 LOS88_07950 IPR006218 DAHP synthetase I/KDSA LOS88_07955 IPR033718 Diacylglycerol kinase, prokaryotic LOS88_07955 IPR036945 Diacylglycerol kinase (DAGK) superfamily LOS88_07955 IPR000829 DAGK family LOS88_07965 IPR002912 ACT domain LOS88_07965 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOS88_07965 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LOS88_07965 IPR036291 NAD(P)-binding domain superfamily LOS88_07965 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LOS88_07965 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LOS88_07970 IPR037171 NagB/RpiA transferase-like LOS88_07970 IPR004788 Ribose 5-phosphate isomerase, type A LOS88_07970 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup LOS88_07975 IPR037171 NagB/RpiA transferase-like LOS88_07975 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily LOS88_07975 IPR002698 5-formyltetrahydrofolate cyclo-ligase LOS88_07990 IPR023940 Dihydrodipicolinate reductase LOS88_07990 IPR036291 NAD(P)-binding domain superfamily LOS88_07990 IPR022664 Dihydrodipicolinate reductase, conserved site LOS88_07990 IPR000846 Dihydrodipicolinate reductase, N-terminal LOS88_07990 IPR022663 Dihydrodipicolinate reductase, C-terminal LOS88_08000 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain LOS88_08000 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily LOS88_08000 IPR029062 Class I glutamine amidotransferase-like LOS88_08000 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain LOS88_08000 IPR017926 Glutamine amidotransferase LOS88_08000 IPR006274 Carbamoyl-phosphate synthase, small subunit LOS88_08005 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain LOS88_08005 IPR016185 Pre-ATP-grasp domain superfamily LOS88_08005 IPR036914 Methylglyoxal synthase-like domain superfamily LOS88_08005 IPR006275 Carbamoyl-phosphate synthase, large subunit LOS88_08005 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain LOS88_08005 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LOS88_08005 IPR011761 ATP-grasp fold LOS88_08005 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily LOS88_08005 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain LOS88_08005 IPR011607 Methylglyoxal synthase-like domain LOS88_08010 IPR011673 Protein of unknown function DUF1615 LOS88_08015 IPR036263 Chorismate mutase type II superfamily LOS88_08015 IPR036979 Chorismate mutase domain superfamily LOS88_08015 IPR002701 Chorismate mutase II, prokaryotic-type LOS88_08015 IPR011277 Chorismate mutase, T-protein LOS88_08015 IPR036291 NAD(P)-binding domain superfamily LOS88_08015 IPR003099 Prephenate dehydrogenase LOS88_08015 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_08015 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein LOS88_08020 IPR006218 DAHP synthetase I/KDSA LOS88_08020 IPR013785 Aldolase-type TIM barrel LOS88_08020 IPR006219 DHAP synthase, class 1 LOS88_08025 IPR011831 Glucose-1-phosphate adenylyltransferase LOS88_08025 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial LOS88_08025 IPR005835 Nucleotidyl transferase domain LOS88_08025 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_08025 IPR011004 Trimeric LpxA-like superfamily LOS88_08025 IPR005836 ADP-glucose pyrophosphorylase, conserved site LOS88_08030 IPR005665 Protein-export membrane protein SecF, bacterial LOS88_08030 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LOS88_08030 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LOS88_08030 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LOS88_08035 IPR005791 Protein translocase subunit SecD LOS88_08035 IPR027398 SecD export protein N-terminal TM domain LOS88_08035 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LOS88_08035 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LOS88_08035 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LOS88_08070 IPR036265 HIT-like superfamily LOS88_08070 IPR011146 HIT-like domain LOS88_08070 IPR019808 Histidine triad, conserved site LOS88_08070 IPR001310 Histidine triad (HIT) protein LOS88_08075 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_08075 IPR004090 Chemotaxis methyl-accepting receptor LOS88_08075 IPR003660 HAMP domain LOS88_08075 IPR000727 Target SNARE coiled-coil homology domain LOS88_08075 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_08085 IPR006680 Amidohydrolase-related LOS88_08085 IPR004722 Dihydroorotase LOS88_08085 IPR002195 Dihydroorotase, conserved site LOS88_08085 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_08085 IPR032466 Metal-dependent hydrolase LOS88_08100 IPR023954 C4-dicarboxylate transport protein LOS88_08100 IPR001991 Sodium:dicarboxylate symporter LOS88_08100 IPR018107 Sodium:dicarboxylate symporter, conserved site LOS88_08100 IPR036458 Sodium:dicarboxylate symporter superfamily LOS88_08105 IPR001610 PAC motif LOS88_08105 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_08105 IPR000700 PAS-associated, C-terminal LOS88_08105 IPR035965 PAS domain superfamily LOS88_08105 IPR004090 Chemotaxis methyl-accepting receptor LOS88_08105 IPR000014 PAS domain LOS88_08105 IPR013655 PAS fold-3 LOS88_08120 IPR008526 Inner membrane protein YedI LOS88_08125 IPR013647 Oligopeptidase F, N-terminal domain LOS88_08125 IPR042088 Oligoendopeptidase F, C-terminal domain LOS88_08125 IPR004438 Peptidase M3B, oligoendopeptidase F LOS88_08125 IPR001567 Peptidase M3A/M3B catalytic domain LOS88_08130 IPR017588 Uric acid permease UacT-like LOS88_08130 IPR006042 Xanthine/uracil permease LOS88_08130 IPR006043 Xanthine/uracil/vitamin C permease LOS88_08135 IPR029058 Alpha/Beta hydrolase fold LOS88_08135 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LOS88_08135 IPR022987 Uncharacterised protein family UPF0227 LOS88_08140 IPR023753 FAD/NAD(P)-binding domain LOS88_08140 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_08150 IPR034457 Organic radical-activating enzymes LOS88_08150 IPR013785 Aldolase-type TIM barrel LOS88_08150 IPR007197 Radical SAM LOS88_08150 IPR001989 Radical-activating enzyme, conserved site LOS88_08150 IPR034465 Pyruvate formate-lyase activase LOS88_08150 IPR012838 Pyruvate formate-lyase 1 activating enzyme LOS88_08150 IPR012839 Organic radical enzyme activase LOS88_08155 IPR005330 MHYT domain LOS88_08155 IPR029787 Nucleotide cyclase LOS88_08155 IPR000160 GGDEF domain LOS88_08155 IPR035919 EAL domain superfamily LOS88_08155 IPR001633 EAL domain LOS88_08160 IPR023753 FAD/NAD(P)-binding domain LOS88_08160 IPR023536 Coenzyme A disulphide reductase, staphyolococci LOS88_08160 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_08160 IPR017758 Coenzyme A disulphide reductase LOS88_08160 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LOS88_08160 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOS88_08170 IPR040639 Alpha-2-macroglobulin, MG1 domain LOS88_08170 IPR011625 Alpha-2-macroglobulin, bait region domain LOS88_08170 IPR026284 Alpha-2-macroglobulin, bacteria LOS88_08170 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain LOS88_08170 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LOS88_08170 IPR011626 Alpha-macroglobulin-like, TED domain LOS88_08170 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain LOS88_08170 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain LOS88_08170 IPR001599 Alpha-2-macroglobulin LOS88_08170 IPR002890 Macroglobulin domain LOS88_08170 IPR021868 Alpha-2-macroglobulin MG3 domain LOS88_08175 IPR009647 Penicillin-binding, C-terminal LOS88_08175 IPR011815 Penicillin-binding protein 1C LOS88_08175 IPR001264 Glycosyl transferase, family 51 LOS88_08175 IPR012338 Beta-lactamase/transpeptidase-like LOS88_08175 IPR036950 Penicillin binding protein transglycosylase domain LOS88_08175 IPR023346 Lysozyme-like domain superfamily LOS88_08175 IPR001460 Penicillin-binding protein, transpeptidase LOS88_08190 IPR036873 Rhodanese-like domain superfamily LOS88_08190 IPR003720 tRNA sulfurtransferase ThiI LOS88_08190 IPR004114 THUMP domain LOS88_08190 IPR001763 Rhodanese-like domain LOS88_08190 IPR026340 Thiazole biosynthesis domain LOS88_08190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_08190 IPR020536 Thil, AANH domain LOS88_08200 IPR005115 Uncharacterised domain UPF0126 LOS88_08205 IPR001492 Flagellin LOS88_08205 IPR001029 Flagellin, D0/D1 domain LOS88_08205 IPR010810 Flagellin hook, IN motif LOS88_08205 IPR042187 Flagellin, C-terminal domain, subdomain 2 LOS88_08210 IPR001492 Flagellin LOS88_08210 IPR042187 Flagellin, C-terminal domain, subdomain 2 LOS88_08210 IPR001029 Flagellin, D0/D1 domain LOS88_08210 IPR010810 Flagellin hook, IN motif LOS88_08220 IPR003481 Flagellar hook-associated protein 2, N-terminal LOS88_08220 IPR040026 Flagellar hook-associated protein 2 LOS88_08220 IPR010810 Flagellin hook, IN motif LOS88_08220 IPR010809 Flagellar hook-associated protein 2, C-terminal LOS88_08225 IPR003713 Flagellar protein FliS LOS88_08225 IPR036584 Flagellar protein FliS superfamily LOS88_08245 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal LOS88_08245 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily LOS88_08245 IPR013785 Aldolase-type TIM barrel LOS88_08245 IPR013974 SAF domain LOS88_08245 IPR020030 Pseudaminic acid biosynthesis, PseI LOS88_08245 IPR013132 N-acetylneuraminic acid synthase, N-terminal LOS88_08255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_08255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_08255 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_08255 IPR005814 Aminotransferase class-III LOS88_08255 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase LOS88_08260 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase LOS88_08260 IPR003329 Acylneuraminate cytidylyltransferase LOS88_08260 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_08270 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LOS88_08270 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase LOS88_08270 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_08270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_08270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_08275 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain LOS88_08275 IPR036291 NAD(P)-binding domain superfamily LOS88_08275 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) LOS88_08280 IPR002491 ABC transporter periplasmic binding domain LOS88_08280 IPR023544 ABC transporter, vitamin B12-binding protein LOS88_08290 IPR010049 MTA/SAH nucleosidase LOS88_08290 IPR000845 Nucleoside phosphorylase domain LOS88_08290 IPR035994 Nucleoside phosphorylase superfamily LOS88_08295 IPR003689 Zinc/iron permease LOS88_08300 IPR000760 Inositol monophosphatase-like LOS88_08300 IPR022337 Inositol monophosphatase, SuhB LOS88_08300 IPR020550 Inositol monophosphatase, conserved site LOS88_08300 IPR033942 Inositol monophosphatase LOS88_08300 IPR020583 Inositol monophosphatase, metal-binding site LOS88_08310 IPR010987 Glutathione S-transferase, C-terminal-like LOS88_08310 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LOS88_08310 IPR004045 Glutathione S-transferase, N-terminal LOS88_08310 IPR004046 Glutathione S-transferase, C-terminal LOS88_08310 IPR036249 Thioredoxin-like superfamily LOS88_08315 IPR036259 MFS transporter superfamily LOS88_08315 IPR011701 Major facilitator superfamily LOS88_08315 IPR020846 Major facilitator superfamily domain LOS88_08315 IPR004734 Multidrug resistance protein LOS88_08325 IPR023771 Cell division protein ZapA, eubacteria LOS88_08325 IPR036192 Cell division protein ZapA-like superfamily LOS88_08325 IPR007838 Cell division protein ZapA-like LOS88_08330 IPR036255 YgfB-like superfamily LOS88_08330 IPR011978 Uncharacterised protein family UPF0149 LOS88_08335 IPR002938 FAD-binding domain LOS88_08335 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_08335 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site LOS88_08335 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase LOS88_08335 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 LOS88_08340 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 LOS88_08340 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site LOS88_08340 IPR002938 FAD-binding domain LOS88_08340 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_08345 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 LOS88_08345 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal LOS88_08345 IPR006222 Aminomethyltransferase, folate-binding domain LOS88_08345 IPR028896 Aminomethyltransferase-like LOS88_08345 IPR022903 Glycine cleavage system T protein, bacteria LOS88_08345 IPR006223 Glycine cleavage system T protein LOS88_08345 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain LOS88_08350 IPR000089 Biotin/lipoyl attachment LOS88_08350 IPR011053 Single hybrid motif LOS88_08350 IPR017453 Glycine cleavage system H-protein, subgroup LOS88_08350 IPR033753 Glycine cleavage system H-protein/Simiate LOS88_08350 IPR002930 Glycine cleavage system H-protein LOS88_08350 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LOS88_08355 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_08355 IPR020581 Glycine cleavage system P protein LOS88_08355 IPR003437 Glycine dehydrogenase (decarboxylating) LOS88_08355 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_08355 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_08360 IPR004090 Chemotaxis methyl-accepting receptor LOS88_08360 IPR013655 PAS fold-3 LOS88_08360 IPR003660 HAMP domain LOS88_08360 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_08360 IPR001610 PAC motif LOS88_08360 IPR000014 PAS domain LOS88_08360 IPR035965 PAS domain superfamily LOS88_08380 IPR004840 Amino acid permease, conserved site LOS88_08380 IPR004841 Amino acid permease/ SLC12A domain LOS88_08390 IPR026530 Phosphoenolpyruvate synthase regulatory protein LOS88_08390 IPR005177 Bifunctional kinase-pyrophosphorylase LOS88_08395 IPR008279 PEP-utilising enzyme, mobile domain LOS88_08395 IPR006319 Phosphoenolpyruvate synthase LOS88_08395 IPR040442 Pyruvate kinase-like domain superfamily LOS88_08395 IPR018274 PEP-utilising enzyme, active site LOS88_08395 IPR000121 PEP-utilising enzyme, C-terminal LOS88_08395 IPR023151 PEP-utilising enzyme, conserved site LOS88_08395 IPR036637 Phosphohistidine domain superfamily LOS88_08395 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding LOS88_08395 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_08395 IPR013815 ATP-grasp fold, subdomain 1 LOS88_08405 IPR008979 Galactose-binding-like domain superfamily LOS88_08405 IPR002884 P domain LOS88_08405 IPR023828 Peptidase S8, subtilisin, Ser-active site LOS88_08405 IPR023827 Peptidase S8, subtilisin, Asp-active site LOS88_08405 IPR036852 Peptidase S8/S53 domain superfamily LOS88_08405 IPR015500 Peptidase S8, subtilisin-related LOS88_08405 IPR000209 Peptidase S8/S53 domain LOS88_08410 IPR004872 Lipoprotein NlpA family LOS88_08415 IPR024588 Inner membrane protein YejM, N-terminal LOS88_08415 IPR012159 Inner membrane protein YejM LOS88_08415 IPR000917 Sulfatase, N-terminal LOS88_08415 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_08420 IPR023202 YejL-like superfamily LOS88_08420 IPR009857 Uncharacterised protein family UPF0352 LOS88_08425 IPR007358 Nucleoid-associated protein NdpA LOS88_08430 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein LOS88_08430 IPR006059 Bacterial extracellular solute-binding protein LOS88_08430 IPR006061 Solute-binding family 1, conserved site LOS88_08435 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_08435 IPR029345 Maltose transport system permease protein MalF, P2 domain LOS88_08435 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like LOS88_08435 IPR035277 MalF, N-terminal LOS88_08435 IPR035906 MetI-like superfamily LOS88_08440 IPR035906 MetI-like superfamily LOS88_08440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_08445 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_08445 IPR015855 ABC transporter, maltose/maltodextrin import, MalK LOS88_08445 IPR017871 ABC transporter, conserved site LOS88_08445 IPR003439 ABC transporter-like LOS88_08445 IPR003593 AAA+ ATPase domain LOS88_08445 IPR013611 Transport-associated OB, type 2 LOS88_08445 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_08450 IPR022488 Polyphosphate kinase-2-related LOS88_08450 IPR022486 Polyphosphate kinase 2, PA0141 LOS88_08450 IPR016898 Polyphosphate kinase 2 LOS88_08450 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_08455 IPR029058 Alpha/Beta hydrolase fold LOS88_08455 IPR000073 Alpha/beta hydrolase fold-1 LOS88_08455 IPR000639 Epoxide hydrolase-like LOS88_08455 IPR023594 Haloalkane dehalogenase, subfamily 2 LOS88_08465 IPR002549 Transmembrane protein TqsA-like LOS88_08475 IPR001915 Peptidase M48 LOS88_08475 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_08475 IPR011716 Tetratricopeptide TPR-3 LOS88_08475 IPR030873 Beta-barrel assembly-enhancing protease LOS88_08480 IPR036249 Thioredoxin-like superfamily LOS88_08480 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LOS88_08480 IPR023555 Thiol-disulphide oxidoreductase ResA LOS88_08480 IPR013766 Thioredoxin domain LOS88_08485 IPR036249 Thioredoxin-like superfamily LOS88_08485 IPR006660 Arsenate reductase-like LOS88_08485 IPR006659 Arsenate reductase LOS88_08495 IPR007431 Acyl carrier protein phosphodiesterase LOS88_08495 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria LOS88_08500 IPR001320 Ionotropic glutamate receptor LOS88_08500 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LOS88_08500 IPR018313 Solute-binding protein family 3, conserved site LOS88_08500 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_08505 IPR010229 Peptidase M38, beta-aspartyl dipeptidase LOS88_08505 IPR032466 Metal-dependent hydrolase LOS88_08505 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_08505 IPR033826 Isoaspartyl-dipeptidase LOS88_08505 IPR006680 Amidohydrolase-related LOS88_08510 IPR005642 Lysine exporter LysO LOS88_08515 IPR003593 AAA+ ATPase domain LOS88_08515 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LOS88_08515 IPR003439 ABC transporter-like LOS88_08515 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_08515 IPR017871 ABC transporter, conserved site LOS88_08520 IPR018313 Solute-binding protein family 3, conserved site LOS88_08520 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_08520 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LOS88_08525 IPR030199 Histidine transport system permease protein HisQ LOS88_08525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_08525 IPR035906 MetI-like superfamily LOS88_08525 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_08530 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_08530 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_08530 IPR035906 MetI-like superfamily LOS88_08535 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_08535 IPR006508 Pseudouridine synthase, RluA-like LOS88_08535 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LOS88_08535 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_08545 IPR037523 Vicinal oxygen chelate (VOC) domain LOS88_08545 IPR005956 4-hydroxyphenylpyruvate dioxygenase LOS88_08545 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal LOS88_08545 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal LOS88_08545 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LOS88_08545 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LOS88_08550 IPR014710 RmlC-like jelly roll fold LOS88_08550 IPR005708 Homogentisate 1,2-dioxygenase LOS88_08550 IPR011051 RmlC-like cupin domain superfamily LOS88_08560 IPR004046 Glutathione S-transferase, C-terminal LOS88_08560 IPR010987 Glutathione S-transferase, C-terminal-like LOS88_08560 IPR004045 Glutathione S-transferase, N-terminal LOS88_08560 IPR040079 Glutathione Transferase family LOS88_08560 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LOS88_08560 IPR005955 Glutathione S-transferases, class Zeta LOS88_08560 IPR034330 Glutathione S-transferases, class Zeta , C-terminal LOS88_08560 IPR034333 Glutathione S-transferases, class Zeta , N-terminal LOS88_08560 IPR036249 Thioredoxin-like superfamily LOS88_08565 IPR005322 Peptidase C69, dipeptidase A LOS88_08570 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_08570 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LOS88_08570 IPR010161 Peptidase M20B, tripeptide aminopeptidase LOS88_08570 IPR002933 Peptidase M20 LOS88_08570 IPR011650 Peptidase M20, dimerisation domain LOS88_08575 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LOS88_08575 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_08575 IPR002933 Peptidase M20 LOS88_08575 IPR011650 Peptidase M20, dimerisation domain LOS88_08575 IPR010161 Peptidase M20B, tripeptide aminopeptidase LOS88_08580 IPR018385 C4-dicarboxylate anaerobic carrier-like LOS88_08580 IPR004669 C4-dicarboxylate anaerobic carrier LOS88_08590 IPR029055 Nucleophile aminohydrolases, N-terminal LOS88_08590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_08590 IPR006426 Asparagine synthase, glutamine-hydrolyzing LOS88_08590 IPR033738 Asparagine synthase, N-terminal domain LOS88_08590 IPR001962 Asparagine synthase LOS88_08590 IPR017932 Glutamine amidotransferase type 2 domain LOS88_08600 IPR003148 Regulator of K+ conductance, N-terminal LOS88_08600 IPR036291 NAD(P)-binding domain superfamily LOS88_08600 IPR006153 Cation/H+ exchanger LOS88_08600 IPR004771 K+/H+ exchanger LOS88_08600 IPR038770 Sodium/solute symporter superfamily LOS88_08605 IPR036412 HAD-like superfamily LOS88_08605 IPR006357 HAD-superfamily hydrolase, subfamily IIA LOS88_08605 IPR023214 HAD superfamily LOS88_08610 IPR001365 Adenosine/AMP deaminase domain LOS88_08610 IPR028892 Adenine deaminase type 2 LOS88_08610 IPR006330 Adenosine/adenine deaminase LOS88_08610 IPR032466 Metal-dependent hydrolase LOS88_08620 IPR013785 Aldolase-type TIM barrel LOS88_08620 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LOS88_08625 IPR005170 Transporter-associated domain LOS88_08625 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_08625 IPR005496 Integral membrane protein TerC LOS88_08625 IPR000644 CBS domain LOS88_08625 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_08635 IPR004113 FAD-linked oxidase, C-terminal LOS88_08635 IPR016164 FAD-linked oxidase-like, C-terminal LOS88_08635 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_08635 IPR009051 Alpha-helical ferredoxin LOS88_08635 IPR006094 FAD linked oxidase, N-terminal LOS88_08635 IPR016166 FAD-binding domain, PCMH-type LOS88_08635 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_08635 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_08645 IPR006683 Thioesterase domain LOS88_08645 IPR029069 HotDog domain superfamily LOS88_08645 IPR003736 Phenylacetic acid degradation-related domain LOS88_08650 IPR028618 ATP-dependent RNA helicase DeaD LOS88_08650 IPR034415 CsdA, RNA recognition motif LOS88_08650 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_08650 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain LOS88_08650 IPR001650 Helicase, C-terminal LOS88_08650 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LOS88_08650 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_08650 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_08650 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_08650 IPR011545 DEAD/DEAH box helicase domain LOS88_08660 IPR001633 EAL domain LOS88_08660 IPR035919 EAL domain superfamily LOS88_08660 IPR000160 GGDEF domain LOS88_08660 IPR005330 MHYT domain LOS88_08660 IPR029787 Nucleotide cyclase LOS88_08660 IPR000014 PAS domain LOS88_08660 IPR035965 PAS domain superfamily LOS88_08665 IPR032813 Putative Na+/H+ antiporter, N-terminal LOS88_08665 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LOS88_08670 IPR036397 Ribonuclease H superfamily LOS88_08670 IPR012337 Ribonuclease H-like superfamily LOS88_08670 IPR005987 Ribonuclease T LOS88_08670 IPR013520 Exonuclease, RNase T/DNA polymerase III LOS88_08675 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LOS88_08675 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LOS88_08680 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOS88_08680 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain LOS88_08680 IPR038251 PdxB, dimerisation domain superfamily LOS88_08680 IPR036291 NAD(P)-binding domain superfamily LOS88_08680 IPR020921 Erythronate-4-phosphate dehydrogenase LOS88_08680 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LOS88_08685 IPR036291 NAD(P)-binding domain superfamily LOS88_08685 IPR000534 Semialdehyde dehydrogenase, NAD-binding LOS88_08685 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LOS88_08685 IPR012080 Aspartate-semialdehyde dehydrogenase LOS88_08685 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type LOS88_08695 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_08695 IPR001406 Pseudouridine synthase I, TruA LOS88_08695 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain LOS88_08695 IPR020095 Pseudouridine synthase I, TruA, C-terminal LOS88_08700 IPR034733 Acetyl-CoA carboxylase LOS88_08700 IPR041010 Acetyl-coA carboxylase zinc finger domain LOS88_08700 IPR029045 ClpP/crotonase-like domain superfamily LOS88_08700 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal LOS88_08700 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit LOS88_08705 IPR001645 Folylpolyglutamate synthetase LOS88_08705 IPR018109 Folylpolyglutamate synthetase, conserved site LOS88_08705 IPR036565 Mur-like, catalytic domain superfamily LOS88_08705 IPR004101 Mur ligase, C-terminal LOS88_08705 IPR036615 Mur ligase, C-terminal domain superfamily LOS88_08705 IPR013221 Mur ligase, central LOS88_08710 IPR032898 Cell division protein DedD LOS88_08710 IPR007730 Sporulation-like domain LOS88_08710 IPR036680 Sporulation-like domain superfamily LOS88_08715 IPR002765 Uncharacterised protein family UPF0145 LOS88_08715 IPR035439 UPF0145 domain superfamily LOS88_08725 IPR028281 Siroheme synthase, central domain LOS88_08725 IPR000878 Tetrapyrrole methylase LOS88_08725 IPR012409 Sirohaem synthase LOS88_08725 IPR037115 Sirohaem synthase, dimerisation domain superfamily LOS88_08725 IPR036291 NAD(P)-binding domain superfamily LOS88_08725 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site LOS88_08725 IPR019478 Sirohaem synthase, dimerisation domain LOS88_08725 IPR006367 Sirohaem synthase, N-terminal LOS88_08725 IPR006366 Uroporphyrin-III C-methyltransferase LOS88_08725 IPR014776 Tetrapyrrole methylase, subdomain 2 LOS88_08725 IPR014777 Tetrapyrrole methylase, subdomain 1 LOS88_08725 IPR035996 Tetrapyrrole methylase superfamily LOS88_08730 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LOS88_08730 IPR014261 Sulphite reductase, subunit C LOS88_08730 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LOS88_08730 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_08730 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_08730 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LOS88_08730 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LOS88_08735 IPR014260 Sulphite reductase, subunit B LOS88_08735 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_08735 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain LOS88_08735 IPR001433 Oxidoreductase FAD/NAD(P)-binding LOS88_08735 IPR017938 Riboflavin synthase-like beta-barrel LOS88_08735 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit LOS88_08735 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_08740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_08740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_08740 IPR009051 Alpha-helical ferredoxin LOS88_08740 IPR014259 Sulphite reductase, subunit A LOS88_08745 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LOS88_08745 IPR002641 Patatin-like phospholipase domain LOS88_08745 IPR037483 YjjU-like LOS88_08755 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_08755 IPR000917 Sulfatase, N-terminal LOS88_08765 IPR036393 Acetylglutamate kinase-like superfamily LOS88_08765 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain LOS88_08765 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_08765 IPR005260 Aspartate kinase, monofunctional class LOS88_08765 IPR001341 Aspartate kinase LOS88_08765 IPR018042 Aspartate kinase, conserved site LOS88_08765 IPR002912 ACT domain LOS88_08770 IPR036393 Acetylglutamate kinase-like superfamily LOS88_08770 IPR016181 Acyl-CoA N-acyltransferase LOS88_08770 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_08770 IPR000182 GNAT domain LOS88_08770 IPR033719 N-acetylglutamate synthase, kinase-like domain LOS88_08770 IPR010167 Amino-acid N-acetyltransferase LOS88_08775 IPR002569 Peptide methionine sulphoxide reductase MsrA LOS88_08775 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily LOS88_08815 IPR002559 Transposase, IS4-like LOS88_08815 IPR032806 H repeat-associated protein, N-terminal LOS88_08830 IPR003838 ABC transporter permease protein domain LOS88_08830 IPR025857 MacB-like periplasmic core domain LOS88_08835 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_08835 IPR011924 Lipoprotein releasing system, ATP-binding protein LOS88_08835 IPR015854 ABC transporter, lipoprotein release, LolD LOS88_08835 IPR017871 ABC transporter, conserved site LOS88_08835 IPR003439 ABC transporter-like LOS88_08835 IPR003593 AAA+ ATPase domain LOS88_08845 IPR004680 Citrate transporter-like domain LOS88_08850 IPR004734 Multidrug resistance protein LOS88_08850 IPR020846 Major facilitator superfamily domain LOS88_08850 IPR011701 Major facilitator superfamily LOS88_08850 IPR004812 Drug resistance transporter Bcr/CmlA subfamily LOS88_08850 IPR036259 MFS transporter superfamily LOS88_08865 IPR002922 Thiazole biosynthetic enzyme Thi4 family LOS88_08865 IPR022828 Thiazole biosynthetic enzyme, prokaryotic LOS88_08865 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_08870 IPR036259 MFS transporter superfamily LOS88_08870 IPR004923 Iron permease FTR1/Fip1/EfeU LOS88_08870 IPR005217 Iron permease FTR1-like LOS88_08885 IPR020761 Uncharacterised protein family UPF0114, bacteria LOS88_08885 IPR005134 Uncharacterised protein family UPF0114 LOS88_08905 IPR011547 SLC26A/SulP transporter domain LOS88_08905 IPR001902 SLC26A/SulP transporter LOS88_08905 IPR002645 STAS domain LOS88_08905 IPR036513 STAS domain superfamily LOS88_08905 IPR018045 Sulphate anion transporter, conserved site LOS88_08930 IPR009057 Homeobox-like domain superfamily LOS88_08930 IPR006118 Recombinase, conserved site LOS88_08930 IPR006119 Resolvase, N-terminal catalytic domain LOS88_08930 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_08930 IPR006120 Resolvase, HTH domain LOS88_08945 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal LOS88_08945 IPR016181 Acyl-CoA N-acyltransferase LOS88_08945 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LOS88_08955 IPR003660 HAMP domain LOS88_08955 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_08955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_08955 IPR005467 Histidine kinase domain LOS88_08955 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_08955 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_08955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_08960 IPR011006 CheY-like superfamily LOS88_08960 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_08960 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_08960 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_08960 IPR001789 Signal transduction response regulator, receiver domain LOS88_08960 IPR039420 Transcriptional regulatory protein WalR-like LOS88_08980 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase LOS88_08980 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LOS88_08980 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site LOS88_08980 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LOS88_08980 IPR036291 NAD(P)-binding domain superfamily LOS88_08985 IPR002059 Cold-shock protein, DNA-binding LOS88_08985 IPR012340 Nucleic acid-binding, OB-fold LOS88_08985 IPR012156 Cold shock, CspA LOS88_08985 IPR012751 CspD, cold shock LOS88_08985 IPR011129 Cold shock domain LOS88_08985 IPR019844 Cold-shock (CSD) domain LOS88_08990 IPR003769 Adaptor protein ClpS, core LOS88_08990 IPR022935 ATP-dependent Clp protease adaptor protein ClpS LOS88_08990 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LOS88_08995 IPR036628 Clp, N-terminal domain superfamily LOS88_08995 IPR019489 Clp ATPase, C-terminal LOS88_08995 IPR028299 ClpA/B, conserved site 2 LOS88_08995 IPR018368 ClpA/B, conserved site 1 LOS88_08995 IPR001270 ClpA/B family LOS88_08995 IPR004176 Clp, N-terminal LOS88_08995 IPR003959 ATPase, AAA-type, core LOS88_08995 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA LOS88_08995 IPR041546 ClpA/ClpB, AAA lid domain LOS88_08995 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_08995 IPR003593 AAA+ ATPase domain LOS88_09000 IPR006196 RNA-binding domain, S1, IF1 type LOS88_09000 IPR022967 RNA-binding domain, S1 LOS88_09000 IPR004368 Translation initiation factor IF-1 LOS88_09000 IPR012340 Nucleic acid-binding, OB-fold LOS88_09005 IPR017138 Aspartate/glutamate leucyltransferase LOS88_09005 IPR016181 Acyl-CoA N-acyltransferase LOS88_09005 IPR030700 N-end rule aminoacyl transferase LOS88_09005 IPR007472 N-end rule aminoacyl transferase, C-terminal LOS88_09005 IPR007471 N-end aminoacyl transferase, N-terminal LOS88_09010 IPR016181 Acyl-CoA N-acyltransferase LOS88_09010 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase LOS88_09010 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal LOS88_09015 IPR008816 Glycine zipper 2TM domain LOS88_09020 IPR033424 Membrane-associated sensor domain LOS88_09020 IPR000160 GGDEF domain LOS88_09020 IPR029787 Nucleotide cyclase LOS88_09025 IPR005982 Thioredoxin reductase LOS88_09025 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LOS88_09025 IPR023753 FAD/NAD(P)-binding domain LOS88_09025 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_09030 IPR008141 Alanine dehydrogenase LOS88_09030 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LOS88_09030 IPR036291 NAD(P)-binding domain superfamily LOS88_09030 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LOS88_09030 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 LOS88_09035 IPR036390 Winged helix DNA-binding domain superfamily LOS88_09035 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LOS88_09035 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LOS88_09035 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_09035 IPR019888 Transcription regulator AsnC-type LOS88_09035 IPR011008 Dimeric alpha-beta barrel LOS88_09035 IPR000485 AsnC-type HTH domain LOS88_09035 IPR011991 ArsR-like helix-turn-helix domain LOS88_09040 IPR036390 Winged helix DNA-binding domain superfamily LOS88_09040 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_09040 IPR018541 FtsK gamma domain LOS88_09040 IPR002543 FtsK domain LOS88_09040 IPR041027 FtsK alpha domain LOS88_09040 IPR025199 DNA translocase FtsK, 4TM region LOS88_09040 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09045 IPR029046 Lipoprotein localisation LolA/LolB/LppX LOS88_09045 IPR004564 Outer membrane lipoprotein carrier protein LolA-like LOS88_09045 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria LOS88_09050 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LOS88_09050 IPR003593 AAA+ ATPase domain LOS88_09050 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09050 IPR021886 MgsA AAA+ ATPase C-terminal LOS88_09050 IPR032423 AAA C-terminal domain LOS88_09050 IPR003959 ATPase, AAA-type, core LOS88_09055 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily LOS88_09055 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_09055 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LOS88_09055 IPR033729 Serine-tRNA ligase catalytic core domain LOS88_09055 IPR002317 Serine-tRNA ligase, type1 LOS88_09055 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LOS88_09055 IPR015866 Serine-tRNA synthetase, type1, N-terminal LOS88_09065 IPR003825 Colicin V production, CvpA LOS88_09070 IPR029057 Phosphoribosyltransferase-like LOS88_09070 IPR005854 Amidophosphoribosyltransferase LOS88_09070 IPR029055 Nucleophile aminohydrolases, N-terminal LOS88_09070 IPR035584 Amidophosphoribosyltransferase, N-terminal LOS88_09070 IPR017932 Glutamine amidotransferase type 2 domain LOS88_09070 IPR000836 Phosphoribosyltransferase domain LOS88_09075 IPR012347 Ferritin-like LOS88_09075 IPR009078 Ferritin-like superfamily LOS88_09075 IPR010386 tRNA-hydroxylase MiaE LOS88_09080 IPR006259 Adenylate kinase subfamily LOS88_09080 IPR000850 Adenylate kinase/UMP-CMP kinase LOS88_09080 IPR033690 Adenylate kinase, conserved site LOS88_09080 IPR007862 Adenylate kinase, active site lid domain LOS88_09080 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09085 IPR033659 Ferrochelatase, N-terminal LOS88_09085 IPR033644 Ferrochelatase, C-terminal LOS88_09085 IPR019772 Ferrochelatase, active site LOS88_09085 IPR001015 Ferrochelatase LOS88_09095 IPR011611 Carbohydrate kinase PfkB LOS88_09095 IPR029056 Ribokinase-like LOS88_09095 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LOS88_09110 IPR005330 MHYT domain LOS88_09110 IPR001633 EAL domain LOS88_09110 IPR035919 EAL domain superfamily LOS88_09110 IPR029787 Nucleotide cyclase LOS88_09110 IPR035965 PAS domain superfamily LOS88_09110 IPR000160 GGDEF domain LOS88_09115 IPR005835 Nucleotidyl transferase domain LOS88_09115 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_09115 IPR011004 Trimeric LpxA-like superfamily LOS88_09115 IPR011831 Glucose-1-phosphate adenylyltransferase LOS88_09115 IPR005836 ADP-glucose pyrophosphorylase, conserved site LOS88_09115 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial LOS88_09125 IPR010835 Protein of unknown function DUF1439 LOS88_09135 IPR021318 Protein of unknown function DUF2919 LOS88_09140 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB LOS88_09140 IPR004488 Magnesium/cobalt transport protein CorA LOS88_09145 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase LOS88_09145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_09145 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_09150 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site LOS88_09150 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal LOS88_09150 IPR012255 Electron transfer flavoprotein, beta subunit LOS88_09150 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal LOS88_09150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_09155 IPR001308 Electron transfer flavoprotein alpha subunit/FixB LOS88_09155 IPR029035 DHS-like NAD/FAD-binding domain superfamily LOS88_09155 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal LOS88_09155 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal LOS88_09155 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal LOS88_09155 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site LOS88_09155 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_09160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_09160 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_09160 IPR000192 Aminotransferase class V domain LOS88_09160 IPR022278 Phosphoserine aminotransferase LOS88_09160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_09160 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LOS88_09165 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta LOS88_09165 IPR036968 Enolpyruvate transferase domain superfamily LOS88_09165 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase LOS88_09165 IPR001986 Enolpyruvate transferase domain LOS88_09165 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site LOS88_09170 IPR006219 DHAP synthase, class 1 LOS88_09170 IPR006218 DAHP synthetase I/KDSA LOS88_09170 IPR013785 Aldolase-type TIM barrel LOS88_09175 IPR004090 Chemotaxis methyl-accepting receptor LOS88_09175 IPR003660 HAMP domain LOS88_09175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_09180 IPR023404 Radical SAM, alpha/beta horseshoe LOS88_09180 IPR007197 Radical SAM LOS88_09180 IPR026332 Anaerobilin synthase HutW LOS88_09180 IPR006638 Elp3/MiaB/NifB LOS88_09180 IPR034505 Anaerobic coproporphyrinogen-III oxidase LOS88_09185 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_09185 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_09185 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09185 IPR001650 Helicase, C-terminal LOS88_09185 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_09185 IPR028622 ATP-dependent RNA helicase RhlE LOS88_09185 IPR011545 DEAD/DEAH box helicase domain LOS88_09190 IPR000889 Glutathione peroxidase LOS88_09190 IPR029759 Glutathione peroxidase active site LOS88_09190 IPR029760 Glutathione peroxidase conserved site LOS88_09190 IPR036249 Thioredoxin-like superfamily LOS88_09200 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site LOS88_09200 IPR005905 D-alanine--D-alanine ligase LOS88_09200 IPR011095 D-alanine--D-alanine ligase, C-terminal LOS88_09200 IPR011127 D-alanine--D-alanine ligase, N-terminal domain LOS88_09200 IPR016185 Pre-ATP-grasp domain superfamily LOS88_09200 IPR011761 ATP-grasp fold LOS88_09200 IPR013815 ATP-grasp fold, subdomain 1 LOS88_09205 IPR011682 Glycosyl hydrolase family 38, C-terminal LOS88_09205 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LOS88_09205 IPR011013 Galactose mutarotase-like domain superfamily LOS88_09205 IPR037094 Glycoside hydrolase family 38, central domain superfamily LOS88_09205 IPR000602 Glycoside hydrolase family 38, N-terminal domain LOS88_09205 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily LOS88_09205 IPR015341 Glycoside hydrolase family 38, central domain LOS88_09205 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily LOS88_09210 IPR036095 PTS system IIB component-like superfamily LOS88_09210 IPR013011 Phosphotransferase system, EIIB component, type 2 LOS88_09210 IPR002178 PTS EIIA type-2 domain LOS88_09210 IPR006327 Phosphotransferase system, fructose IIC component LOS88_09210 IPR003353 Phosphotransferase system, fructose-specific IIB subunit LOS88_09210 IPR004715 Phosphotransferase system, IIA component fructose subfamily LOS88_09210 IPR013014 Phosphotransferase system, EIIC component, type 2 LOS88_09210 IPR003352 Phosphotransferase system, EIIC LOS88_09210 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LOS88_09210 IPR016152 Phosphotransferase/anion transporter LOS88_09215 IPR000524 Transcription regulator HTH, GntR LOS88_09215 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LOS88_09215 IPR011663 UbiC transcription regulator-associated LOS88_09215 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_09215 IPR036390 Winged helix DNA-binding domain superfamily LOS88_09220 IPR025824 OB-fold nucleic acid binding domain LOS88_09220 IPR003753 Exonuclease VII, large subunit LOS88_09220 IPR020579 Exonuclease VII, large subunit, C-terminal LOS88_09225 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase LOS88_09225 IPR016174 Di-haem cytochrome, transmembrane LOS88_09230 IPR005990 Inosine-5'-monophosphate dehydrogenase LOS88_09230 IPR013785 Aldolase-type TIM barrel LOS88_09230 IPR000644 CBS domain LOS88_09230 IPR001093 IMP dehydrogenase/GMP reductase LOS88_09230 IPR015875 IMP dehydrogenase / GMP reductase, conserved site LOS88_09235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_09235 IPR029062 Class I glutamine amidotransferase-like LOS88_09235 IPR017926 Glutamine amidotransferase LOS88_09235 IPR001674 GMP synthase, C-terminal LOS88_09235 IPR004739 GMP synthase, glutamine amidotransferase LOS88_09235 IPR022955 GMP synthase LOS88_09235 IPR022310 NAD/GMP synthase LOS88_09235 IPR025777 GMP synthetase ATP pyrophosphatase domain LOS88_09245 IPR025668 Transposase DDE domain LOS88_09275 IPR036291 NAD(P)-binding domain superfamily LOS88_09275 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_09275 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_09285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_09285 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification LOS88_09285 IPR025835 Thiopurine S-methyltransferase LOS88_09285 IPR008854 TPMT family LOS88_09290 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LOS88_09290 IPR011765 Peptidase M16, N-terminal LOS88_09290 IPR001431 Peptidase M16, zinc-binding site LOS88_09290 IPR007863 Peptidase M16, C-terminal LOS88_09290 IPR032632 Peptidase M16, middle/third domain LOS88_09295 IPR013078 Histidine phosphatase superfamily, clade-1 LOS88_09295 IPR029033 Histidine phosphatase superfamily LOS88_09295 IPR004449 Phosphohistidine phosphatase SixA LOS88_09305 IPR000620 EamA domain LOS88_09310 IPR039424 Solute-binding protein family 5 LOS88_09310 IPR023765 Solute-binding protein family 5, conserved site LOS88_09310 IPR000914 Solute-binding protein family 5 domain LOS88_09310 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_09315 IPR000146 Fructose-1,6-bisphosphatase class 1 LOS88_09315 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal LOS88_09315 IPR028343 Fructose-1,6-bisphosphatase LOS88_09315 IPR020548 Fructose-1,6-bisphosphatase, active site LOS88_09320 IPR037235 TRCF-like, C-terminal domain LOS88_09320 IPR041471 UvrB, interaction domain LOS88_09320 IPR005118 Transcription-repair-coupling factor, C-terminal domain LOS88_09320 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09320 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_09320 IPR001650 Helicase, C-terminal LOS88_09320 IPR036101 CarD-like/TRCF domain superfamily LOS88_09320 IPR011545 DEAD/DEAH box helicase domain LOS88_09320 IPR003711 CarD-like/TRCF domain LOS88_09320 IPR004576 Transcription-repair coupling factor LOS88_09330 IPR003838 ABC transporter permease protein domain LOS88_09330 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E LOS88_09330 IPR025857 MacB-like periplasmic core domain LOS88_09335 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09335 IPR015854 ABC transporter, lipoprotein release, LolD LOS88_09335 IPR011924 Lipoprotein releasing system, ATP-binding protein LOS88_09335 IPR003439 ABC transporter-like LOS88_09335 IPR003593 AAA+ ATPase domain LOS88_09335 IPR017871 ABC transporter, conserved site LOS88_09340 IPR003838 ABC transporter permease protein domain LOS88_09340 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E LOS88_09340 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type LOS88_09340 IPR025857 MacB-like periplasmic core domain LOS88_09345 IPR003607 HD/PDEase domain LOS88_09345 IPR022971 5'-deoxynucleotidase YfbR LOS88_09345 IPR039356 Metal-dependent nucleoside 5'-monophosphatase LOS88_09355 IPR027304 Trigger factor/SurA domain superfamily LOS88_09355 IPR008881 Trigger factor, ribosome-binding, bacterial LOS88_09355 IPR036611 Trigger factor ribosome-binding domain superfamily LOS88_09355 IPR008880 Trigger factor, C-terminal LOS88_09355 IPR037041 Trigger factor, C-terminal domain superfamily LOS88_09355 IPR005215 Trigger factor LOS88_09355 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LOS88_09360 IPR001907 ATP-dependent Clp protease proteolytic subunit LOS88_09360 IPR029045 ClpP/crotonase-like domain superfamily LOS88_09360 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LOS88_09360 IPR033135 ClpP, histidine active site LOS88_09360 IPR018215 ClpP, Ser active site LOS88_09365 IPR038366 Zinc finger, ClpX C4-type superfamily LOS88_09365 IPR010603 Zinc finger, ClpX C4-type LOS88_09365 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09365 IPR019489 Clp ATPase, C-terminal LOS88_09365 IPR003959 ATPase, AAA-type, core LOS88_09365 IPR003593 AAA+ ATPase domain LOS88_09365 IPR004487 Clp protease, ATP-binding subunit ClpX LOS88_09370 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09370 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_09370 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_09370 IPR015947 PUA-like superfamily LOS88_09370 IPR008268 Peptidase S16, active site LOS88_09370 IPR003111 Lon, substrate-binding domain LOS88_09370 IPR027543 Lon protease, bacterial LOS88_09370 IPR008269 Peptidase S16, Lon proteolytic domain LOS88_09370 IPR004815 Lon protease, bacterial/eukaryotic-type LOS88_09370 IPR003959 ATPase, AAA-type, core LOS88_09370 IPR003593 AAA+ ATPase domain LOS88_09370 IPR027065 Lon protease LOS88_09375 IPR000119 Histone-like DNA-binding protein LOS88_09375 IPR020816 Histone-like DNA-binding protein, conserved site LOS88_09375 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LOS88_09380 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LOS88_09380 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LOS88_09380 IPR027304 Trigger factor/SurA domain superfamily LOS88_09390 IPR003593 AAA+ ATPase domain LOS88_09390 IPR003439 ABC transporter-like LOS88_09390 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09390 IPR032781 ABC-transporter extension domain LOS88_09395 IPR022000 Min27-like integrase, DNA-binding domain LOS88_09395 IPR002104 Integrase, catalytic domain LOS88_09395 IPR013762 Integrase-like, catalytic domain superfamily LOS88_09395 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_09395 IPR010998 Integrase/recombinase, N-terminal LOS88_09450 IPR007476 Putative exonuclease, RdgC LOS88_09480 IPR010584 Exodeoxyribonuclease 8 LOS88_09480 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain LOS88_09520 IPR005039 Antirepressor protein, C-terminal LOS88_09520 IPR014054 Bacteriophage regulatory protein, Rha family LOS88_09710 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal LOS88_09710 IPR013557 AntA/AntB antirepressor LOS88_09750 IPR010985 Ribbon-helix-helix LOS88_09750 IPR013321 Arc-type ribbon-helix-helix LOS88_09750 IPR005569 Arc-like DNA binding domain LOS88_09755 IPR012337 Ribonuclease H-like superfamily LOS88_09755 IPR036397 Ribonuclease H superfamily LOS88_09755 IPR001598 Transposase, IS30, conserved site LOS88_09755 IPR001584 Integrase, catalytic core LOS88_09755 IPR009057 Homeobox-like domain superfamily LOS88_09765 IPR018212 Sodium/solute symporter, conserved site LOS88_09765 IPR001734 Sodium/solute symporter LOS88_09765 IPR038377 Sodium/glucose symporter superfamily LOS88_09765 IPR014083 Cation/acetate symporter ActP LOS88_09770 IPR007436 Protein of unknown function DUF485 LOS88_09785 IPR029045 ClpP/crotonase-like domain superfamily LOS88_09785 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LOS88_09785 IPR001753 Enoyl-CoA hydratase/isomerase LOS88_09800 IPR025668 Transposase DDE domain LOS88_09815 IPR001598 Transposase, IS30, conserved site LOS88_09815 IPR036397 Ribonuclease H superfamily LOS88_09815 IPR012337 Ribonuclease H-like superfamily LOS88_09815 IPR001584 Integrase, catalytic core LOS88_09815 IPR009057 Homeobox-like domain superfamily LOS88_09825 IPR025668 Transposase DDE domain LOS88_09835 IPR001463 Sodium:alanine symporter LOS88_09845 IPR042252 MtfA, N-terminal LOS88_09845 IPR024079 Metallopeptidase, catalytic domain superfamily LOS88_09845 IPR010384 MtfA family LOS88_09870 IPR001584 Integrase, catalytic core LOS88_09870 IPR036397 Ribonuclease H superfamily LOS88_09870 IPR001598 Transposase, IS30, conserved site LOS88_09870 IPR009057 Homeobox-like domain superfamily LOS88_09870 IPR012337 Ribonuclease H-like superfamily LOS88_09880 IPR006076 FAD dependent oxidoreductase LOS88_09880 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_09885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_09885 IPR035906 MetI-like superfamily LOS88_09890 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_09890 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_09890 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 LOS88_09890 IPR015853 ABC transporter, ferric cation import, FbpC LOS88_09890 IPR003439 ABC transporter-like LOS88_09890 IPR003593 AAA+ ATPase domain LOS88_09890 IPR017871 ABC transporter, conserved site LOS88_09895 IPR026045 Ferric binding protein LOS88_09900 IPR011663 UbiC transcription regulator-associated LOS88_09900 IPR036390 Winged helix DNA-binding domain superfamily LOS88_09900 IPR017722 Phosphonate utilization transcriptional regulator PhnR LOS88_09900 IPR000524 Transcription regulator HTH, GntR LOS88_09900 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LOS88_09900 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_09905 IPR000192 Aminotransferase class V domain LOS88_09905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_09905 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase LOS88_09905 IPR012703 2-aminoethylphosphonate--pyruvate transaminase LOS88_09905 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_09905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_09910 IPR005814 Aminotransferase class-III LOS88_09910 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_09910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_09910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_09915 IPR006323 Phosphonoacetaldehyde hydrolase LOS88_09915 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_09915 IPR036412 HAD-like superfamily LOS88_09915 IPR023214 HAD superfamily LOS88_09915 IPR006439 HAD hydrolase, subfamily IA LOS88_09920 IPR005616 CcmH/CycL/Ccl2/NrfF family LOS88_09920 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily LOS88_09920 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF LOS88_09920 IPR013026 Tetratricopeptide repeat-containing domain LOS88_09920 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_09920 IPR019734 Tetratricopeptide repeat LOS88_09925 IPR013766 Thioredoxin domain LOS88_09925 IPR036249 Thioredoxin-like superfamily LOS88_09925 IPR013740 Redoxin LOS88_09925 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE LOS88_09925 IPR017937 Thioredoxin, conserved site LOS88_09930 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE LOS88_09930 IPR003570 Cytochrome c-type biogenesis protein NrfE LOS88_09930 IPR003567 Cytochrome c-type biogenesis protein LOS88_09930 IPR002541 Cytochrome c assembly protein LOS88_09930 IPR003568 Cytochrome c-type biogenesis protein CcmF LOS88_09930 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LOS88_09935 IPR005614 NrfD family LOS88_09935 IPR017566 NrfD LOS88_09940 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_09940 IPR017567 Cytochrome c nitrite reductase, Fe-S protein LOS88_09940 IPR006311 Twin-arginine translocation pathway, signal sequence LOS88_09940 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LOS88_09940 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_09945 IPR010177 Doubled CXXCH motif LOS88_09945 IPR036280 Multiheme cytochrome superfamily LOS88_09945 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit LOS88_09945 IPR023155 Cytochrome c-552/4 LOS88_09945 IPR011031 Multihaem cytochrome LOS88_09950 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit LOS88_09950 IPR011031 Multihaem cytochrome LOS88_09950 IPR036280 Multiheme cytochrome superfamily LOS88_09950 IPR003321 Cytochrome c552 LOS88_09960 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_09960 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_09960 IPR004017 Cysteine-rich domain LOS88_09960 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit LOS88_09960 IPR009051 Alpha-helical ferredoxin LOS88_09965 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LOS88_09965 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_09965 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit LOS88_09970 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit LOS88_09970 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase LOS88_09970 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_09970 IPR006076 FAD dependent oxidoreductase LOS88_09970 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LOS88_09970 IPR007419 BFD-like [2Fe-2S]-binding domain LOS88_09975 IPR023006 Uncharacterised protein family UPF0225 LOS88_09975 IPR004027 SEC-C motif LOS88_09975 IPR032710 NTF2-like domain superfamily LOS88_09980 IPR004090 Chemotaxis methyl-accepting receptor LOS88_09980 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_09980 IPR033480 Single Cache domain 2 LOS88_09980 IPR003660 HAMP domain LOS88_09985 IPR000835 MarR-type HTH domain LOS88_09985 IPR000600 ROK family LOS88_09985 IPR036390 Winged helix DNA-binding domain superfamily LOS88_09985 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_09990 IPR005636 DTW LOS88_09990 IPR039262 DTW domain-containing protein 2 LOS88_09995 IPR002781 Transmembrane protein TauE-like LOS88_10000 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_10000 IPR005119 LysR, substrate-binding LOS88_10000 IPR000847 Transcription regulator HTH, LysR LOS88_10000 IPR036390 Winged helix DNA-binding domain superfamily LOS88_10010 IPR018062 HTH domain AraC-type, conserved site LOS88_10010 IPR018060 DNA binding HTH domain, AraC-type LOS88_10010 IPR009057 Homeobox-like domain superfamily LOS88_10010 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like LOS88_10015 IPR034139 OLD protein-like, TOPRIM domain LOS88_10015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_10015 IPR006171 TOPRIM domain LOS88_10015 IPR022602 Protein of unknown function DUF2813 LOS88_10025 IPR004193 Glycoside hydrolase, family 13, N-terminal LOS88_10025 IPR013780 Glycosyl hydrolase, all-beta LOS88_10025 IPR011837 Glycogen debranching enzyme, GlgX type LOS88_10025 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_10025 IPR017853 Glycoside hydrolase superfamily LOS88_10025 IPR013783 Immunoglobulin-like fold LOS88_10025 IPR014756 Immunoglobulin E-set LOS88_10065 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal LOS88_10065 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LOS88_10065 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LOS88_10065 IPR023042 Peptidase M17, leucine aminopeptidase LOS88_10070 IPR036412 HAD-like superfamily LOS88_10070 IPR006439 HAD hydrolase, subfamily IA LOS88_10070 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB LOS88_10070 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_10070 IPR023214 HAD superfamily LOS88_10070 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_10085 IPR032886 tRNA-dihydrouridine(16) synthase LOS88_10085 IPR013785 Aldolase-type TIM barrel LOS88_10085 IPR035587 DUS-like, FMN-binding domain LOS88_10085 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal LOS88_10085 IPR001269 tRNA-dihydrouridine synthase LOS88_10090 IPR007401 Protein of unknown function DUF454 LOS88_10095 IPR029057 Phosphoribosyltransferase-like LOS88_10095 IPR005764 Adenine phosphoribosyl transferase LOS88_10095 IPR000836 Phosphoribosyltransferase domain LOS88_10100 IPR001270 ClpA/B family LOS88_10100 IPR003593 AAA+ ATPase domain LOS88_10100 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_10100 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV LOS88_10100 IPR021029 DNA polymerase III, tau subunit, domain V LOS88_10100 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily LOS88_10100 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LOS88_10100 IPR012763 DNA polymerase III, subunit gamma/ tau LOS88_10100 IPR022754 DNA polymerase III, gamma subunit, domain III LOS88_10105 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily LOS88_10105 IPR004401 Nucleoid-associated protein YbaB/EbfC family LOS88_10110 IPR036237 Xylose isomerase-like superfamily LOS88_10110 IPR018246 AP endonuclease 2, zinc binding site LOS88_10110 IPR001719 AP endonuclease 2 LOS88_10110 IPR013022 Xylose isomerase-like, TIM barrel domain LOS88_10115 IPR005119 LysR, substrate-binding LOS88_10115 IPR000847 Transcription regulator HTH, LysR LOS88_10115 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_10115 IPR036390 Winged helix DNA-binding domain superfamily LOS88_10125 IPR004960 Bacterial lipid A biosynthesis acyltransferase LOS88_10125 IPR011921 Lipid A biosynthesis myristoyltransferase LOS88_10130 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase LOS88_10130 IPR004960 Bacterial lipid A biosynthesis acyltransferase LOS88_10130 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP LOS88_10145 IPR000160 GGDEF domain LOS88_10145 IPR029787 Nucleotide cyclase LOS88_10155 IPR036397 Ribonuclease H superfamily LOS88_10155 IPR012337 Ribonuclease H-like superfamily LOS88_10155 IPR023211 DNA polymerase, palm domain superfamily LOS88_10155 IPR042087 DNA polymerase family B, C-terminal domain LOS88_10155 IPR006172 DNA-directed DNA polymerase, family B LOS88_10155 IPR017964 DNA-directed DNA polymerase, family B, conserved site LOS88_10155 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain LOS88_10155 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain LOS88_10170 IPR002725 Protein of unknown function DUF45 LOS88_10185 IPR018385 C4-dicarboxylate anaerobic carrier-like LOS88_10185 IPR004669 C4-dicarboxylate anaerobic carrier LOS88_10200 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal LOS88_10200 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC LOS88_10200 IPR008471 MnmC-like methyltransferase LOS88_10200 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_10200 IPR006076 FAD dependent oxidoreductase LOS88_10205 IPR016039 Thiolase-like LOS88_10205 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LOS88_10205 IPR014030 Beta-ketoacyl synthase, N-terminal LOS88_10205 IPR014031 Beta-ketoacyl synthase, C-terminal LOS88_10205 IPR018201 Beta-ketoacyl synthase, active site LOS88_10205 IPR000794 Beta-ketoacyl synthase LOS88_10215 IPR006512 YidE/YbjL duplication LOS88_10215 IPR023017 Transport protein YbjL, putative LOS88_10215 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LOS88_10215 IPR006037 Regulator of K+ conductance, C-terminal LOS88_10230 IPR001650 Helicase, C-terminal LOS88_10230 IPR024759 UvrB, YAD/RRR-motif-containing domain LOS88_10230 IPR041471 UvrB, interaction domain LOS88_10230 IPR004807 UvrABC system, subunit B LOS88_10230 IPR036876 UVR domain superfamily LOS88_10230 IPR001943 UVR domain LOS88_10230 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_10230 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_10230 IPR006935 Helicase/UvrB, N-terminal LOS88_10240 IPR032818 DedA family LOS88_10240 IPR032816 SNARE associated Golgi protein LOS88_10245 IPR023380 DsbB-like superfamily LOS88_10245 IPR022920 Disulphide bond formation protein DsbB LOS88_10245 IPR003752 Disulphide bond formation protein DsbB/BdbC LOS88_10250 IPR004671 Na+/H+ antiporter NhaB LOS88_10255 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_10255 IPR036390 Winged helix DNA-binding domain superfamily LOS88_10255 IPR014178 Fatty acid response transcription factor FadR LOS88_10255 IPR028374 FadR, C-terminal domain LOS88_10255 IPR000524 Transcription regulator HTH, GntR LOS88_10255 IPR008920 Transcription regulator FadR/GntR, C-terminal LOS88_10265 IPR011335 Restriction endonuclease type II-like LOS88_10265 IPR038590 YaeQ superfamily LOS88_10265 IPR009822 YaeQ LOS88_10275 IPR001387 Cro/C1-type helix-turn-helix domain LOS88_10275 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_10275 IPR036286 LexA/Signal peptidase-like superfamily LOS88_10275 IPR015927 Peptidase S24/S26A/S26B/S26C LOS88_10275 IPR039418 LexA-like LOS88_10365 IPR032806 H repeat-associated protein, N-terminal LOS88_10365 IPR002559 Transposase, IS4-like LOS88_10395 IPR013668 Ribonuclease R winged-helix domain LOS88_10395 IPR036390 Winged helix DNA-binding domain superfamily LOS88_10400 IPR021874 Bacteriophage Mu, Gp27 LOS88_10405 IPR012036 Bacteriophage Mu, Gp28 LOS88_10405 IPR004921 Terminase large subunit, T4likevirus-type LOS88_10410 IPR009279 Protein of unknown function DUF935 LOS88_10435 IPR009057 Homeobox-like domain superfamily LOS88_10435 IPR001584 Integrase, catalytic core LOS88_10435 IPR012337 Ribonuclease H-like superfamily LOS88_10435 IPR036397 Ribonuclease H superfamily LOS88_10435 IPR001598 Transposase, IS30, conserved site LOS88_10460 IPR001584 Integrase, catalytic core LOS88_10460 IPR012337 Ribonuclease H-like superfamily LOS88_10460 IPR036397 Ribonuclease H superfamily LOS88_10460 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LOS88_10465 IPR003593 AAA+ ATPase domain LOS88_10465 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_10465 IPR002611 IstB-like ATP-binding protein LOS88_10465 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_10475 IPR012106 Protease, Mu phage/prophage I type LOS88_10485 IPR012106 Protease, Mu phage/prophage I type LOS88_10490 IPR018774 Bacteriophage Mu, GpT LOS88_10585 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_10585 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LOS88_10585 IPR035965 PAS domain superfamily LOS88_10585 IPR000014 PAS domain LOS88_10585 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_10585 IPR002197 DNA binding HTH domain, Fis-type LOS88_10585 IPR009057 Homeobox-like domain superfamily LOS88_10585 IPR003593 AAA+ ATPase domain LOS88_10585 IPR025944 Sigma-54 interaction domain, conserved site LOS88_10585 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_10610 IPR026287 Protein adenylyltransferase SoFic-like LOS88_10610 IPR036597 Fido-like domain superfamily LOS88_10610 IPR003812 Fido domain LOS88_10610 IPR040198 Fido domain-containing protein LOS88_10610 IPR025758 Fic/DOC N-terminal LOS88_10620 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily LOS88_10620 IPR003356 DNA methylase, adenine-specific LOS88_10620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_10680 IPR002528 Multi antimicrobial extrusion protein LOS88_10680 IPR022913 Multidrug resistance protein MdtK LOS88_10685 IPR009624 Uncharacterised protein family UPF0253 LOS88_10690 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LOS88_10690 IPR001783 Lumazine-binding protein LOS88_10690 IPR017938 Riboflavin synthase-like beta-barrel LOS88_10690 IPR026017 Lumazine-binding domain LOS88_10700 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_10700 IPR023214 HAD superfamily LOS88_10700 IPR036412 HAD-like superfamily LOS88_10700 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_10700 IPR006439 HAD hydrolase, subfamily IA LOS88_10705 IPR011761 ATP-grasp fold LOS88_10705 IPR011054 Rudiment single hybrid motif LOS88_10705 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase LOS88_10705 IPR016185 Pre-ATP-grasp domain superfamily LOS88_10705 IPR001509 NAD-dependent epimerase/dehydratase LOS88_10705 IPR013815 ATP-grasp fold, subdomain 1 LOS88_10705 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LOS88_10710 IPR000620 EamA domain LOS88_10720 IPR012337 Ribonuclease H-like superfamily LOS88_10720 IPR001584 Integrase, catalytic core LOS88_10720 IPR001598 Transposase, IS30, conserved site LOS88_10720 IPR009057 Homeobox-like domain superfamily LOS88_10720 IPR036397 Ribonuclease H superfamily LOS88_10725 IPR003680 Flavodoxin-like fold LOS88_10725 IPR029039 Flavoprotein-like superfamily LOS88_10725 IPR023048 NADH-azoreductase, FMN-dependent LOS88_10750 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_10750 IPR040764 Conserved virulence factor B-like, winged helix domain LOS88_10750 IPR039566 Conserved virulence factor B, S1 domain LOS88_10750 IPR014464 Conserved virulence factor B LOS88_10760 IPR007376 dsDNA mimic, putative LOS88_10760 IPR036763 Putative dsDNA mimic superfamily LOS88_10765 IPR011812 Biosynthetic peptidoglycan transglycosylase LOS88_10765 IPR023346 Lysozyme-like domain superfamily LOS88_10765 IPR001264 Glycosyl transferase, family 51 LOS88_10765 IPR036950 Penicillin binding protein transglycosylase domain LOS88_10770 IPR036763 Putative dsDNA mimic superfamily LOS88_10770 IPR007376 dsDNA mimic, putative LOS88_10775 IPR005527 Cell division topological specificity factor MinE LOS88_10775 IPR036707 Cell division topological specificity factor MinE superfamily LOS88_10780 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_10780 IPR010223 ATP binding protein MinD, bacterial-type LOS88_10780 IPR025501 ATP binding protein MinD LOS88_10780 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LOS88_10785 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily LOS88_10785 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal LOS88_10785 IPR005526 Septum formation inhibitor MinC, C-terminal LOS88_10785 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily LOS88_10785 IPR007874 Septum formation inhibitor MinC, N-terminal LOS88_10785 IPR013033 Septum formation inhibitor MinC LOS88_10790 IPR038068 YcgL-like superfamily LOS88_10790 IPR027354 YcgL domain LOS88_10795 IPR029009 Allosteric substrate binding domain superfamily LOS88_10795 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form LOS88_10795 IPR005130 Serine dehydratase-like, alpha subunit LOS88_10795 IPR005131 Serine dehydratase beta chain LOS88_10800 IPR005131 Serine dehydratase beta chain LOS88_10800 IPR029009 Allosteric substrate binding domain superfamily LOS88_10800 IPR005130 Serine dehydratase-like, alpha subunit LOS88_10800 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form LOS88_10805 IPR011051 RmlC-like cupin domain superfamily LOS88_10805 IPR014710 RmlC-like jelly roll fold LOS88_10805 IPR009664 Pyrimidine/purine nucleoside phosphorylase LOS88_10810 IPR002559 Transposase, IS4-like LOS88_10810 IPR032806 H repeat-associated protein, N-terminal LOS88_10815 IPR036458 Sodium:dicarboxylate symporter superfamily LOS88_10815 IPR018107 Sodium:dicarboxylate symporter, conserved site LOS88_10815 IPR001991 Sodium:dicarboxylate symporter LOS88_10815 IPR033380 Glutamate-aspartate symport protein GltP/GltT LOS88_10820 IPR035966 Phosphofructokinase superfamily LOS88_10820 IPR022953 ATP-dependent 6-phosphofructokinase LOS88_10820 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type LOS88_10820 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic LOS88_10820 IPR015912 Phosphofructokinase, conserved site LOS88_10820 IPR000023 Phosphofructokinase domain LOS88_10825 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic LOS88_10825 IPR013785 Aldolase-type TIM barrel LOS88_10825 IPR020861 Triosephosphate isomerase, active site LOS88_10825 IPR035990 Triosephosphate isomerase superfamily LOS88_10825 IPR000652 Triosephosphate isomerase LOS88_10830 IPR003848 Domain of unknown function DUF218 LOS88_10835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_10835 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase LOS88_10835 IPR025714 Methyltransferase domain LOS88_10840 IPR005582 Chromosome partition protein MukF LOS88_10840 IPR033441 Chromosome partition protein MukF, C-terminal domain LOS88_10840 IPR033440 Chromosome partition protein MukF, middle domain LOS88_10840 IPR038198 MukF, C-terminal domain superfamily LOS88_10840 IPR033439 Chromosome partition protein MukF, winged-helix domain LOS88_10840 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_10840 IPR036141 MukF, middle domain superfamily LOS88_10840 IPR036390 Winged helix DNA-binding domain superfamily LOS88_10845 IPR042037 MukE, C-terminal domain LOS88_10845 IPR042038 MukE, N-terminal domain LOS88_10845 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE LOS88_10850 IPR012090 Chromosome partition protein MukB LOS88_10850 IPR032520 MukB, hinge domain LOS88_10850 IPR007406 MukB, N-terminal domain LOS88_10850 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_10855 IPR012997 Rare lipoprotein A LOS88_10855 IPR009009 RlpA-like protein, double-psi beta-barrel domain LOS88_10855 IPR036908 RlpA-like domain superfamily LOS88_10855 IPR034718 Endolytic peptidoglycan transglycosylase RlpA LOS88_10870 IPR025668 Transposase DDE domain LOS88_10895 IPR017702 Putative carbamoyltransferase YgeW LOS88_10895 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LOS88_10895 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LOS88_10895 IPR006130 Aspartate/ornithine carbamoyltransferase LOS88_10895 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LOS88_10900 IPR010081 Diaminopropionate ammonia-lyase LOS88_10900 IPR019871 Diaminopropionate ammonia-lyase, subgroup LOS88_10900 IPR001926 Pyridoxal-phosphate dependent enzyme LOS88_10900 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LOS88_10905 IPR011650 Peptidase M20, dimerisation domain LOS88_10905 IPR017706 Peptidase M20/DapE, YgeY LOS88_10905 IPR002933 Peptidase M20 LOS88_10905 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_10905 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LOS88_10910 IPR032466 Metal-dependent hydrolase LOS88_10910 IPR006680 Amidohydrolase-related LOS88_10910 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_10910 IPR011778 Hydantoinase/dihydropyrimidinase LOS88_10910 IPR023766 D-phenylhydantoinase LOS88_10915 IPR036393 Acetylglutamate kinase-like superfamily LOS88_10915 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_10915 IPR003964 Carbamate kinase LOS88_10920 IPR000620 EamA domain LOS88_10925 IPR004837 Sodium/calcium exchanger membrane region LOS88_10925 IPR004481 Sodium/potassium/calcium exchanger LOS88_10930 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family LOS88_10930 IPR027051 XdhC Rossmann domain LOS88_10930 IPR003777 XdhC- CoxI LOS88_10935 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC LOS88_10935 IPR036565 Mur-like, catalytic domain superfamily LOS88_10940 IPR025877 MobA-like NTP transferase LOS88_10940 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_10940 IPR017696 Molybdenum cofactor cytidylyltransferase LOS88_10945 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_10945 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_10945 IPR017701 Putative selenate reductase YgfK LOS88_10945 IPR009051 Alpha-helical ferredoxin LOS88_10945 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_10945 IPR023753 FAD/NAD(P)-binding domain LOS88_10945 IPR028261 Dihydroprymidine dehydrogenase domain II LOS88_10950 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_10950 IPR032466 Metal-dependent hydrolase LOS88_10950 IPR006680 Amidohydrolase-related LOS88_10950 IPR017700 Putative aminohydrolase SsnA LOS88_10955 IPR005107 CO dehydrogenase flavoprotein, C-terminal LOS88_10955 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily LOS88_10955 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_10955 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_10955 IPR002346 Molybdopterin dehydrogenase, FAD-binding LOS88_10955 IPR017698 Probable selenate reductase, FAD-binding subunit LOS88_10955 IPR016166 FAD-binding domain, PCMH-type LOS88_10960 IPR002888 [2Fe-2S]-binding LOS88_10960 IPR036884 [2Fe-2S]-binding domain superfamily LOS88_10960 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LOS88_10960 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily LOS88_10960 IPR016208 Aldehyde oxidase/xanthine dehydrogenase LOS88_10960 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding LOS88_10960 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily LOS88_10960 IPR012675 Beta-grasp domain superfamily LOS88_10960 IPR017699 Molybdenum-binding protein YgfN/XdhD LOS88_10965 IPR006043 Xanthine/uracil/vitamin C permease LOS88_10965 IPR006042 Xanthine/uracil permease LOS88_10970 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_10970 IPR014311 Guanine deaminase LOS88_10970 IPR006680 Amidohydrolase-related LOS88_10970 IPR032466 Metal-dependent hydrolase LOS88_10975 IPR006043 Xanthine/uracil/vitamin C permease LOS88_10980 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily LOS88_10980 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily LOS88_10980 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding LOS88_10980 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LOS88_10985 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_10985 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_10985 IPR005107 CO dehydrogenase flavoprotein, C-terminal LOS88_10985 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily LOS88_10985 IPR002346 Molybdopterin dehydrogenase, FAD-binding LOS88_10985 IPR016166 FAD-binding domain, PCMH-type LOS88_10990 IPR002888 [2Fe-2S]-binding LOS88_10990 IPR036884 [2Fe-2S]-binding domain superfamily LOS88_10990 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_10990 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_10990 IPR012675 Beta-grasp domain superfamily LOS88_10995 IPR008816 Glycine zipper 2TM domain LOS88_11005 IPR018385 C4-dicarboxylate anaerobic carrier-like LOS88_11015 IPR025668 Transposase DDE domain LOS88_11025 IPR029787 Nucleotide cyclase LOS88_11025 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LOS88_11025 IPR000160 GGDEF domain LOS88_11030 IPR002559 Transposase, IS4-like LOS88_11030 IPR032806 H repeat-associated protein, N-terminal LOS88_11035 IPR000160 GGDEF domain LOS88_11035 IPR013656 PAS fold-4 LOS88_11035 IPR029787 Nucleotide cyclase LOS88_11035 IPR000014 PAS domain LOS88_11035 IPR000700 PAS-associated, C-terminal LOS88_11035 IPR035965 PAS domain superfamily LOS88_11045 IPR023086 Phosphoglycerate mutase, GpmB, probable LOS88_11045 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site LOS88_11045 IPR029033 Histidine phosphatase superfamily LOS88_11045 IPR013078 Histidine phosphatase superfamily, clade-1 LOS88_11050 IPR029787 Nucleotide cyclase LOS88_11050 IPR000160 GGDEF domain LOS88_11050 IPR013656 PAS fold-4 LOS88_11050 IPR035965 PAS domain superfamily LOS88_11050 IPR000014 PAS domain LOS88_11050 IPR000700 PAS-associated, C-terminal LOS88_11055 IPR022990 Uncharacterised protein family UPF0115 LOS88_11055 IPR036063 Smr domain superfamily LOS88_11055 IPR002625 Smr domain LOS88_11060 IPR007848 Methyltransferase small domain LOS88_11060 IPR004556 Methyltransferase HemK-like LOS88_11060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_11060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_11060 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase LOS88_11065 IPR000453 Chorismate synthase LOS88_11065 IPR035904 Chorismate synthase AroC superfamily LOS88_11065 IPR020541 Chorismate synthase, conserved site LOS88_11075 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_11075 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_11075 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_11075 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11075 IPR001650 Helicase, C-terminal LOS88_11075 IPR028622 ATP-dependent RNA helicase RhlE LOS88_11075 IPR011545 DEAD/DEAH box helicase domain LOS88_11085 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily LOS88_11085 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein LOS88_11095 IPR013059 Tryptophan/tyrosine transporter LOS88_11095 IPR013061 Tryptophan/tryrosine permease, conserved site LOS88_11095 IPR018227 Amino acid/polyamine transporter 2 LOS88_11100 IPR028082 Periplasmic binding protein-like I LOS88_11100 IPR012781 D-fructose-responsive transcription factor LOS88_11100 IPR000843 LacI-type HTH domain LOS88_11100 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_11100 IPR001761 Periplasmic binding protein/LacI sugar binding domain LOS88_11105 IPR002178 PTS EIIA type-2 domain LOS88_11105 IPR016152 Phosphotransferase/anion transporter LOS88_11105 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LOS88_11105 IPR000032 Phosphocarrier protein HPr-like LOS88_11105 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LOS88_11105 IPR035895 HPr-like superfamily LOS88_11110 IPR017583 Tagatose/fructose phosphokinase LOS88_11110 IPR022463 Fructose 1-phosphate kinase LOS88_11110 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LOS88_11110 IPR011611 Carbohydrate kinase PfkB LOS88_11110 IPR029056 Ribokinase-like LOS88_11115 IPR036095 PTS system IIB component-like superfamily LOS88_11115 IPR013011 Phosphotransferase system, EIIB component, type 2 LOS88_11115 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LOS88_11115 IPR003352 Phosphotransferase system, EIIC LOS88_11115 IPR013014 Phosphotransferase system, EIIC component, type 2 LOS88_11115 IPR003353 Phosphotransferase system, fructose-specific IIB subunit LOS88_11115 IPR006327 Phosphotransferase system, fructose IIC component LOS88_11120 IPR011051 RmlC-like cupin domain superfamily LOS88_11120 IPR010551 Glucose-6-phosphate isomerase, prokaryote LOS88_11120 IPR014710 RmlC-like jelly roll fold LOS88_11120 IPR016758 Glucose-6-phosphate isomerase, archaea/bacteria LOS88_11125 IPR000843 LacI-type HTH domain LOS88_11125 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_11125 IPR028082 Periplasmic binding protein-like I LOS88_11125 IPR001761 Periplasmic binding protein/LacI sugar binding domain LOS88_11140 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup LOS88_11140 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily LOS88_11140 IPR033887 PTS system mannose/sorbose specific IIA subunit LOS88_11140 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily LOS88_11140 IPR004701 Phosphotransferase system, mannose-type IIA component LOS88_11140 IPR004720 Phosphotransferase system, sorbose subfamily IIB component LOS88_11140 IPR013789 Phosphotransferase system, mannose family IIA component LOS88_11145 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit LOS88_11150 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component LOS88_11155 IPR008928 Six-hairpin glycosidase superfamily LOS88_11155 IPR012341 Six-hairpin glycosidase-like superfamily LOS88_11155 IPR034116 AGE domain LOS88_11160 IPR010710 Protein of unknown function DUF1289 LOS88_11165 IPR036908 RlpA-like domain superfamily LOS88_11165 IPR005300 Lytic transglycosylase MltA, domain B LOS88_11165 IPR034654 MltA, 3D domain LOS88_11165 IPR010611 3D domain LOS88_11165 IPR026044 Membrane-bound lytic murein transglycosylase A LOS88_11170 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_11170 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_11170 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LOS88_11170 IPR012675 Beta-grasp domain superfamily LOS88_11175 IPR033909 Ribonucleotide reductase small subunit LOS88_11175 IPR000358 Ribonucleotide reductase small subunit family LOS88_11175 IPR009078 Ferritin-like superfamily LOS88_11175 IPR012348 Ribonucleotide reductase-like LOS88_11175 IPR030475 Ribonucleotide reductase small subunit, acitve site LOS88_11180 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal LOS88_11180 IPR039718 Ribonucleoside-diphosphate reductase large subunit LOS88_11180 IPR013509 Ribonucleotide reductase large subunit, N-terminal LOS88_11180 IPR000788 Ribonucleotide reductase large subunit, C-terminal LOS88_11180 IPR013346 Ribonucleotide reductase, class I , alpha subunit LOS88_11180 IPR005144 ATP-cone domain LOS88_11185 IPR036412 HAD-like superfamily LOS88_11185 IPR006439 HAD hydrolase, subfamily IA LOS88_11185 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_11185 IPR023214 HAD superfamily LOS88_11185 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_11185 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LOS88_11190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_11190 IPR010233 Ubiquinone biosynthesis O-methyltransferase LOS88_11195 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily LOS88_11195 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta LOS88_11195 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal LOS88_11195 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LOS88_11195 IPR005743 DNA gyrase, subunit A LOS88_11195 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat LOS88_11195 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal LOS88_11210 IPR007197 Radical SAM LOS88_11210 IPR013785 Aldolase-type TIM barrel LOS88_11210 IPR006638 Elp3/MiaB/NifB LOS88_11210 IPR040086 Protein MJ0683-like LOS88_11220 IPR002320 Threonine-tRNA ligase, class IIa LOS88_11220 IPR033728 Threonine-tRNA ligase catalytic core domain LOS88_11220 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LOS88_11220 IPR012676 TGS-like LOS88_11220 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LOS88_11220 IPR004095 TGS LOS88_11220 IPR012675 Beta-grasp domain superfamily LOS88_11220 IPR036621 Anticodon-binding domain superfamily LOS88_11220 IPR004154 Anticodon-binding LOS88_11220 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_11220 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LOS88_11225 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily LOS88_11225 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily LOS88_11225 IPR019813 Translation initiation factor 3, conserved site LOS88_11225 IPR001288 Translation initiation factor 3 LOS88_11225 IPR019815 Translation initiation factor 3, C-terminal LOS88_11225 IPR019814 Translation initiation factor 3, N-terminal LOS88_11230 IPR037229 Ribosomal protein L35 superfamily LOS88_11230 IPR018265 Ribosomal protein L35, conserved site LOS88_11230 IPR001706 Ribosomal protein L35, non-mitochondrial LOS88_11230 IPR021137 Ribosomal protein L35 LOS88_11235 IPR005813 Ribosomal protein L20 LOS88_11235 IPR035566 Ribosomal protein L20, C-terminal LOS88_11240 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_11240 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit LOS88_11240 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal LOS88_11240 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial LOS88_11240 IPR002319 Phenylalanyl-tRNA synthetase LOS88_11240 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LOS88_11245 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LOS88_11245 IPR005147 tRNA synthetase, B5-domain LOS88_11245 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain LOS88_11245 IPR002547 tRNA-binding domain LOS88_11245 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain LOS88_11245 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit LOS88_11245 IPR009061 Putative DNA-binding domain superfamily LOS88_11245 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily LOS88_11245 IPR005121 Ferrodoxin-fold anticodon-binding domain LOS88_11245 IPR005146 B3/B4 tRNA-binding domain LOS88_11245 IPR012340 Nucleic acid-binding, OB-fold LOS88_11250 IPR000119 Histone-like DNA-binding protein LOS88_11250 IPR020816 Histone-like DNA-binding protein, conserved site LOS88_11250 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LOS88_11250 IPR005684 Integration host factor, alpha subunit LOS88_11255 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal LOS88_11255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_11255 IPR038388 RcsC, C-terminal domain superfamily LOS88_11255 IPR030856 Sensor histidine kinase RcsC LOS88_11255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_11255 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_11255 IPR005467 Histidine kinase domain LOS88_11255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_11255 IPR011006 CheY-like superfamily LOS88_11255 IPR001789 Signal transduction response regulator, receiver domain LOS88_11255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_11270 IPR026590 Sirtuin family, catalytic core domain LOS88_11270 IPR027546 Sirtuin, class III LOS88_11270 IPR029035 DHS-like NAD/FAD-binding domain superfamily LOS88_11270 IPR003000 Sirtuin family LOS88_11270 IPR026591 Sirtuin, catalytic core small domain superfamily LOS88_11280 IPR000160 GGDEF domain LOS88_11280 IPR001633 EAL domain LOS88_11280 IPR035919 EAL domain superfamily LOS88_11280 IPR029787 Nucleotide cyclase LOS88_11280 IPR005330 MHYT domain LOS88_11280 IPR035965 PAS domain superfamily LOS88_11285 IPR000843 LacI-type HTH domain LOS88_11285 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_11285 IPR028082 Periplasmic binding protein-like I LOS88_11285 IPR023588 Transcription regulator HTH, PurR LOS88_11290 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LOS88_11290 IPR011611 Carbohydrate kinase PfkB LOS88_11290 IPR002139 Ribokinase/fructokinase LOS88_11290 IPR029056 Ribokinase-like LOS88_11290 IPR011877 Ribokinase LOS88_11295 IPR025997 Periplasmic binding protein LOS88_11295 IPR028082 Periplasmic binding protein-like I LOS88_11300 IPR001851 ABC transporter, permease LOS88_11305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11305 IPR003593 AAA+ ATPase domain LOS88_11305 IPR003439 ABC transporter-like LOS88_11305 IPR015861 ABC transporter, ribose import, RbsA LOS88_11305 IPR017871 ABC transporter, conserved site LOS88_11310 IPR023750 RbsD-like superfamily LOS88_11310 IPR023064 D-ribose pyranase LOS88_11310 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU LOS88_11315 IPR004046 Glutathione S-transferase, C-terminal LOS88_11315 IPR004045 Glutathione S-transferase, N-terminal LOS88_11315 IPR040079 Glutathione Transferase family LOS88_11315 IPR036249 Thioredoxin-like superfamily LOS88_11315 IPR010987 Glutathione S-transferase, C-terminal-like LOS88_11315 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LOS88_11330 IPR006059 Bacterial extracellular solute-binding protein LOS88_11330 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein LOS88_11335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_11335 IPR035906 MetI-like superfamily LOS88_11340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_11340 IPR035906 MetI-like superfamily LOS88_11350 IPR001598 Transposase, IS30, conserved site LOS88_11350 IPR036397 Ribonuclease H superfamily LOS88_11350 IPR012337 Ribonuclease H-like superfamily LOS88_11350 IPR001584 Integrase, catalytic core LOS88_11350 IPR009057 Homeobox-like domain superfamily LOS88_11355 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit LOS88_11355 IPR013611 Transport-associated OB, type 2 LOS88_11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11355 IPR003593 AAA+ ATPase domain LOS88_11355 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA LOS88_11355 IPR003439 ABC transporter-like LOS88_11355 IPR017871 ABC transporter, conserved site LOS88_11355 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_11370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_11370 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type LOS88_11370 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase LOS88_11370 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LOS88_11375 IPR006016 UspA LOS88_11380 IPR012318 Crp-type HTH domain LOS88_11380 IPR000595 Cyclic nucleotide-binding domain LOS88_11380 IPR018490 Cyclic nucleotide-binding-like LOS88_11380 IPR036390 Winged helix DNA-binding domain superfamily LOS88_11380 IPR014710 RmlC-like jelly roll fold LOS88_11380 IPR018335 Transcription regulator HTH, Crp-type, conserved site LOS88_11380 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_11395 IPR006122 Heavy metal-associated domain, copper ion-binding LOS88_11395 IPR017969 Heavy-metal-associated, conserved site LOS88_11395 IPR023214 HAD superfamily LOS88_11395 IPR036412 HAD-like superfamily LOS88_11395 IPR008250 P-type ATPase, A domain superfamily LOS88_11395 IPR023298 P-type ATPase, transmembrane domain superfamily LOS88_11395 IPR023299 P-type ATPase, cytoplasmic domain N LOS88_11395 IPR006121 Heavy metal-associated domain, HMA LOS88_11395 IPR001757 P-type ATPase LOS88_11395 IPR018303 P-type ATPase, phosphorylation site LOS88_11395 IPR036163 Heavy metal-associated domain superfamily LOS88_11395 IPR027256 P-type ATPase, subfamily IB LOS88_11405 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal LOS88_11405 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily LOS88_11405 IPR009056 Cytochrome c-like domain LOS88_11405 IPR036909 Cytochrome c-like domain superfamily LOS88_11405 IPR008168 Cytochrome c, class IC LOS88_11405 IPR004678 Cytochrome c oxidase cbb3-type, subunit III LOS88_11420 IPR000883 Cytochrome c oxidase subunit I LOS88_11420 IPR036927 Cytochrome c oxidase-like, subunit I superfamily LOS88_11420 IPR023616 Cytochrome c oxidase-like, subunit I domain LOS88_11420 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site LOS88_11420 IPR004677 Cytochrome c oxidase cbb3-type, subunit I LOS88_11430 IPR029016 GAF-like domain superfamily LOS88_11430 IPR003018 GAF domain LOS88_11430 IPR000614 Free Met sulfoxide reductase conserved site LOS88_11435 IPR036442 ProQ/FinO domain superfamily LOS88_11435 IPR016103 ProQ/FinO domain LOS88_11435 IPR023529 RNA chaperone ProQ LOS88_11435 IPR035236 RNA chaperone ProQ, C-terminal LOS88_11440 IPR020992 Tail specific protease, C-terminal LOS88_11440 IPR004447 C-terminal-processing peptidase S41A LOS88_11440 IPR036034 PDZ superfamily LOS88_11440 IPR040573 Tail specific protease, N-terminal domain LOS88_11440 IPR001478 PDZ domain LOS88_11440 IPR029045 ClpP/crotonase-like domain superfamily LOS88_11440 IPR005151 Tail specific protease LOS88_11445 IPR042097 Aminopeptidase N-like , N-terminal LOS88_11445 IPR027268 Peptidase M4/M1, CTD superfamily LOS88_11445 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold LOS88_11445 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily LOS88_11445 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LOS88_11445 IPR012779 Peptidase M1, alanyl aminopeptidase LOS88_11445 IPR014782 Peptidase M1, membrane alanine aminopeptidase LOS88_11445 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase LOS88_11445 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily LOS88_11455 IPR007780 NAD-glutamate dehydrogenase, bacteria LOS88_11455 IPR036291 NAD(P)-binding domain superfamily LOS88_11455 IPR028971 NAD-glutamate dehydrogenase LOS88_11460 IPR013785 Aldolase-type TIM barrel LOS88_11460 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 LOS88_11460 IPR005720 Dihydroorotate dehydrogenase domain LOS88_11460 IPR005719 Dihydroorotate dehydrogenase, class 2 LOS88_11460 IPR001295 Dihydroorotate dehydrogenase, conserved site LOS88_11465 IPR009809 Cell division protein ZapC LOS88_11470 IPR034704 L28p-like LOS88_11470 IPR027493 Ribosomal protein L31 type B LOS88_11470 IPR042105 Ribosomal protein L31 superfamily LOS88_11470 IPR002150 Ribosomal protein L31 LOS88_11475 IPR000473 Ribosomal protein L36 LOS88_11475 IPR035977 Ribosomal protein L36 superfamily LOS88_11480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_11480 IPR019614 S-adenosylmethionine-dependent methyltransferase LOS88_11480 IPR004114 THUMP domain LOS88_11480 IPR017244 Ribosomal RNA large subunit methyltransferase K/L LOS88_11480 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_11480 IPR000241 Putative RNA methylase domain LOS88_11490 IPR003439 ABC transporter-like LOS88_11490 IPR017871 ABC transporter, conserved site LOS88_11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11490 IPR032781 ABC-transporter extension domain LOS88_11490 IPR032524 ABC transporter Uup, C-terminal LOS88_11490 IPR003593 AAA+ ATPase domain LOS88_11490 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LOS88_11495 IPR007040 Ribosome modulation factor LOS88_11495 IPR023200 Ribosome modulation factor domain superfamily LOS88_11500 IPR029069 HotDog domain superfamily LOS88_11500 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ LOS88_11500 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA LOS88_11505 IPR041699 Lon protease, AAA domain LOS88_11505 IPR008269 Peptidase S16, Lon proteolytic domain LOS88_11505 IPR027065 Lon protease LOS88_11505 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_11505 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_11670 IPR009813 Uncharacterised protein family YebG LOS88_11670 IPR038627 YebG-like superfamily LOS88_11675 IPR002918 Lipase EstA/Esterase EstB LOS88_11675 IPR029058 Alpha/Beta hydrolase fold LOS88_11680 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_11680 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_11680 IPR036291 NAD(P)-binding domain superfamily LOS88_11705 IPR009721 O-acyltransferase WSD1, C-terminal LOS88_11705 IPR004255 O-acyltransferase, WSD1, N-terminal LOS88_11705 IPR014292 Acyltransferase, WS/DGAT/MGAT LOS88_11720 IPR005656 MmgE/PrpD LOS88_11720 IPR042183 MmgE/PrpD superfamily, domain 1 LOS88_11720 IPR042188 MmgE/PrpD superfamily, domain 2 LOS88_11720 IPR036148 MmgE/PrpD superfamily LOS88_11720 IPR012705 2-methylcitrate dehydratase PrpD LOS88_11725 IPR011278 2-methylcitrate synthase/citrate synthase type I LOS88_11725 IPR016142 Citrate synthase-like, large alpha subdomain LOS88_11725 IPR019810 Citrate synthase active site LOS88_11725 IPR024176 Citrate synthase, bacterial-type LOS88_11725 IPR036969 Citrate synthase superfamily LOS88_11725 IPR002020 Citrate synthase LOS88_11725 IPR016143 Citrate synthase-like, small alpha subdomain LOS88_11730 IPR039556 ICL/PEPM domain LOS88_11730 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site LOS88_11730 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_11730 IPR040442 Pyruvate kinase-like domain superfamily LOS88_11730 IPR012695 2-methylisocitrate lyase LOS88_11740 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type LOS88_11740 IPR007498 Intermembrane transport protein PqiA-like LOS88_11745 IPR003399 Mce/MlaD LOS88_11755 IPR003735 Metal-sensitive transcriptional repressor LOS88_11755 IPR038390 Metal-sensitive transcriptional repressor superfamily LOS88_11760 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LOS88_11760 IPR002524 Cation efflux protein LOS88_11760 IPR027469 Cation efflux transmembrane domain superfamily LOS88_11760 IPR023500 Zinc transporter ZitB LOS88_11765 IPR036390 Winged helix DNA-binding domain superfamily LOS88_11765 IPR001845 HTH ArsR-type DNA-binding domain LOS88_11765 IPR018334 ArsR-type transcription regulator, HTH motif LOS88_11765 IPR011991 ArsR-like helix-turn-helix domain LOS88_11765 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_11770 IPR023267 RNA (C5-cytosine) methyltransferase LOS88_11770 IPR023545 rRNA small subunit methyltransferase F LOS88_11770 IPR011023 Nop2p LOS88_11770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_11770 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain LOS88_11770 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type LOS88_11770 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal LOS88_11770 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site LOS88_11780 IPR010998 Integrase/recombinase, N-terminal LOS88_11780 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_11780 IPR013762 Integrase-like, catalytic domain superfamily LOS88_11780 IPR002104 Integrase, catalytic domain LOS88_11785 IPR032466 Metal-dependent hydrolase LOS88_11785 IPR001130 TatD family LOS88_11785 IPR015991 Uncharacterised hydrolase TatD-type LOS88_11785 IPR018228 Deoxyribonuclease, TatD-related, conserved site LOS88_11790 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LOS88_11790 IPR015199 DNA polymerase III, delta subunit, C-terminal LOS88_11790 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11790 IPR004622 DNA polymerase III, delta prime subunit LOS88_11795 IPR039430 Thymidylate kinase-like domain LOS88_11795 IPR018095 Thymidylate kinase, conserved site LOS88_11795 IPR018094 Thymidylate kinase LOS88_11795 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11800 IPR003770 Endolytic murein transglycosylase LOS88_11805 IPR017824 Aminodeoxychorismate lyase, class IV LOS88_11805 IPR001544 Aminotransferase class IV LOS88_11805 IPR018300 Aminotransferase, class IV, conserved site LOS88_11805 IPR036038 Aminotransferase-like, PLP-dependent enzymes LOS88_11810 IPR016039 Thiolase-like LOS88_11810 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 LOS88_11810 IPR000794 Beta-ketoacyl synthase LOS88_11810 IPR018201 Beta-ketoacyl synthase, active site LOS88_11810 IPR014031 Beta-ketoacyl synthase, C-terminal LOS88_11810 IPR014030 Beta-ketoacyl synthase, N-terminal LOS88_11810 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LOS88_11815 IPR006162 Phosphopantetheine attachment site LOS88_11815 IPR003231 Acyl carrier protein (ACP) LOS88_11815 IPR036736 ACP-like superfamily LOS88_11815 IPR009081 Phosphopantetheine binding ACP domain LOS88_11820 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LOS88_11820 IPR036291 NAD(P)-binding domain superfamily LOS88_11820 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_11820 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_11825 IPR001227 Acyl transferase domain superfamily LOS88_11825 IPR014043 Acyl transferase LOS88_11825 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LOS88_11825 IPR024925 Malonyl CoA-acyl carrier protein transacylase LOS88_11825 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type LOS88_11825 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LOS88_11830 IPR016039 Thiolase-like LOS88_11830 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LOS88_11830 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LOS88_11830 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LOS88_11835 IPR003664 Fatty acid synthesis PlsX protein LOS88_11835 IPR012281 Phospholipid biosynthesis protein, PlsX-like LOS88_11840 IPR002677 Ribosomal protein L32p LOS88_11840 IPR011332 Zinc-binding ribosomal protein LOS88_11845 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria LOS88_11845 IPR003772 Large ribosomal RNA subunit accumulation protein YceD LOS88_11850 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein LOS88_11850 IPR029001 Inosine triphosphate pyrophosphatase-like LOS88_11855 IPR006439 HAD hydrolase, subfamily IA LOS88_11855 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LOS88_11855 IPR023733 Pyrophosphatase PpaX LOS88_11855 IPR023214 HAD superfamily LOS88_11855 IPR041492 Haloacid dehalogenase-like hydrolase LOS88_11855 IPR036412 HAD-like superfamily LOS88_11860 IPR002942 RNA-binding S4 domain LOS88_11860 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_11860 IPR006225 Pseudouridine synthase, RluC/RluD LOS88_11860 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LOS88_11860 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_11860 IPR036986 RNA-binding S4 domain superfamily LOS88_11865 IPR004659 Ribonuclease E/G LOS88_11865 IPR028878 Ribonuclease E LOS88_11865 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G LOS88_11865 IPR021968 Polyribonucleotide phosphorylase C-terminal LOS88_11865 IPR003029 S1 domain LOS88_11865 IPR022967 RNA-binding domain, S1 LOS88_11865 IPR012340 Nucleic acid-binding, OB-fold LOS88_11875 IPR001204 Phosphate transporter LOS88_11880 IPR011962 dCTP deaminase LOS88_11880 IPR029054 dUTPase-like LOS88_11880 IPR036157 dUTPase-like superfamily LOS88_11880 IPR033704 dUTPase, trimeric LOS88_11885 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11885 IPR006083 Phosphoribulokinase/uridine kinase LOS88_11885 IPR026008 Uridine kinase LOS88_11885 IPR000764 Uridine kinase-like LOS88_11890 IPR034904 Fe-S cluster assembly domain superfamily LOS88_11890 IPR019591 Mrp/NBP35 ATP-binding protein LOS88_11890 IPR000808 Mrp, conserved site LOS88_11890 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11890 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 LOS88_11895 IPR033911 Methioninyl-tRNA synthetase core domain LOS88_11895 IPR012340 Nucleic acid-binding, OB-fold LOS88_11895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_11895 IPR015413 Methionyl/Leucyl tRNA synthetase LOS88_11895 IPR014758 Methionyl-tRNA synthetase LOS88_11895 IPR023458 Methionine-tRNA ligase, type 1 LOS88_11895 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal LOS88_11895 IPR029038 Methionyl-tRNA synthetase, Zn-domain LOS88_11895 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain LOS88_11895 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_11895 IPR002547 tRNA-binding domain LOS88_11895 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LOS88_11895 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LOS88_11905 IPR001792 Acylphosphatase-like domain LOS88_11905 IPR020456 Acylphosphatase LOS88_11905 IPR036046 Acylphosphatase-like domain superfamily LOS88_11905 IPR017968 Acylphosphatase, conserved site LOS88_11910 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_11910 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_11910 IPR003660 HAMP domain LOS88_11910 IPR004090 Chemotaxis methyl-accepting receptor LOS88_11910 IPR000727 Target SNARE coiled-coil homology domain LOS88_11915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_11915 IPR023542 rRNA large subunit methyltransferase I LOS88_11915 IPR019614 S-adenosylmethionine-dependent methyltransferase LOS88_11915 IPR036974 PUA domain superfamily LOS88_11915 IPR015947 PUA-like superfamily LOS88_11915 IPR002478 PUA domain LOS88_11915 IPR041532 RlmI, PUA-like domain LOS88_11930 IPR010918 PurM-like, C-terminal domain LOS88_11930 IPR036676 PurM-like, C-terminal domain superfamily LOS88_11930 IPR016188 PurM-like, N-terminal domain LOS88_11930 IPR036921 PurM-like, N-terminal domain superfamily LOS88_11930 IPR023061 Selenophosphate synthetase, class I LOS88_11930 IPR004536 Selenophosphate synthetase LOS88_11935 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase LOS88_11935 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11935 IPR001763 Rhodanese-like domain LOS88_11935 IPR036873 Rhodanese-like domain superfamily LOS88_11940 IPR001279 Metallo-beta-lactamase LOS88_11940 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LOS88_11945 IPR002562 3'-5' exonuclease domain LOS88_11945 IPR010997 HRDC-like superfamily LOS88_11945 IPR002121 HRDC domain LOS88_11945 IPR006292 Ribonuclease D LOS88_11945 IPR012337 Ribonuclease H-like superfamily LOS88_11945 IPR036397 Ribonuclease H superfamily LOS88_11950 IPR025110 AMP-binding enzyme, C-terminal domain LOS88_11950 IPR020845 AMP-binding, conserved site LOS88_11950 IPR000873 AMP-dependent synthetase/ligase LOS88_11950 IPR042099 AMP-dependent synthetase-like superfamily LOS88_11955 IPR029058 Alpha/Beta hydrolase fold LOS88_11955 IPR000073 Alpha/beta hydrolase fold-1 LOS88_11965 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB LOS88_11965 IPR000905 Gcp-like domain LOS88_11970 IPR006935 Helicase/UvrB, N-terminal LOS88_11970 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type LOS88_11970 IPR006555 ATP-dependent helicase, C-terminal LOS88_11970 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_11970 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_11980 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LOS88_11980 IPR011322 Nitrogen regulatory PII-like, alpha/beta LOS88_11980 IPR013115 Histidine biosynthesis HisG, C-terminal LOS88_11980 IPR020621 ATP phosphoribosyltransferase HisG, long form LOS88_11980 IPR018198 ATP phosphoribosyltransferase, conserved site LOS88_11980 IPR013820 ATP phosphoribosyltransferase, catalytic domain LOS88_11980 IPR001348 ATP phosphoribosyltransferase HisG LOS88_11985 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_11985 IPR001692 Histidinol dehydrogenase, conserved site LOS88_11985 IPR022695 Histidinol dehydrogenase, monofunctional LOS88_11985 IPR012131 Histidinol dehydrogenase LOS88_11990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_11990 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_11990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_11990 IPR004839 Aminotransferase, class I/classII LOS88_11990 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LOS88_11990 IPR005861 Histidinol-phosphate aminotransferase family LOS88_11995 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_11995 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site LOS88_11995 IPR000807 Imidazoleglycerol-phosphate dehydratase LOS88_11995 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily LOS88_11995 IPR013954 Polynucleotide kinase 3 phosphatase LOS88_11995 IPR005954 Histidinol-phosphatase LOS88_11995 IPR020566 Histidine biosynthesis bifunctional protein HisB LOS88_11995 IPR023214 HAD superfamily LOS88_11995 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LOS88_11995 IPR036412 HAD-like superfamily LOS88_11995 IPR006543 Histidinol-phosphate phosphatase LOS88_12000 IPR029062 Class I glutamine amidotransferase-like LOS88_12000 IPR017926 Glutamine amidotransferase LOS88_12000 IPR010139 Imidazole glycerol phosphate synthase, subunit H LOS88_12005 IPR013785 Aldolase-type TIM barrel LOS88_12005 IPR006062 Histidine biosynthesis LOS88_12005 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA LOS88_12005 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase LOS88_12005 IPR011060 Ribulose-phosphate binding barrel LOS88_12010 IPR011060 Ribulose-phosphate binding barrel LOS88_12010 IPR004651 Histidine biosynthesis, HisF LOS88_12010 IPR006062 Histidine biosynthesis LOS88_12010 IPR013785 Aldolase-type TIM barrel LOS88_12015 IPR023019 Histidine biosynthesis bifunctional protein HisIE LOS88_12015 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase LOS88_12015 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like LOS88_12015 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain LOS88_12015 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily LOS88_12030 IPR004624 PhnA protein LOS88_12030 IPR013988 PhnA protein, C-terminal LOS88_12030 IPR013987 PhnA protein, N-terminal LOS88_12040 IPR015890 Chorismate-utilising enzyme, C-terminal LOS88_12040 IPR006805 Anthranilate synthase component I, N-terminal LOS88_12040 IPR005801 ADC synthase LOS88_12040 IPR005802 Aminodeoxychorismate synthase, component I LOS88_12040 IPR019999 Anthranilate synthase component I-like LOS88_12045 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_12045 IPR000086 NUDIX hydrolase domain LOS88_12045 IPR000059 NUDIX hydrolase, NudL, conserved site LOS88_12045 IPR023735 Uncharacterised nudix hydrolase NudL LOS88_12050 IPR018227 Amino acid/polyamine transporter 2 LOS88_12050 IPR004694 Hydroxy amino acid transporter LOS88_12060 IPR023025 Serine/threonine transporter SstT LOS88_12060 IPR036458 Sodium:dicarboxylate symporter superfamily LOS88_12060 IPR001991 Sodium:dicarboxylate symporter LOS88_12065 IPR011545 DEAD/DEAH box helicase domain LOS88_12065 IPR018982 RQC domain LOS88_12065 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LOS88_12065 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_12065 IPR002121 HRDC domain LOS88_12065 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_12065 IPR001650 Helicase, C-terminal LOS88_12065 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_12065 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial LOS88_12065 IPR004589 DNA helicase, ATP-dependent, RecQ type LOS88_12065 IPR010997 HRDC-like superfamily LOS88_12070 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_12070 IPR013153 PrkA AAA domain LOS88_12070 IPR010650 PrkA C-terminal domain LOS88_12070 IPR016230 Serine-protein kinase, PrkA LOS88_12075 IPR006698 Uncharacterised protein family UPF0229 LOS88_12080 IPR007390 Sporulation stage V, protein R LOS88_12085 IPR012802 Fatty oxidation complex, alpha subunit FadJ LOS88_12085 IPR036291 NAD(P)-binding domain superfamily LOS88_12085 IPR001753 Enoyl-CoA hydratase/isomerase LOS88_12085 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LOS88_12085 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_12085 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LOS88_12085 IPR029045 ClpP/crotonase-like domain superfamily LOS88_12090 IPR020613 Thiolase, conserved site LOS88_12090 IPR020617 Thiolase, C-terminal LOS88_12090 IPR020616 Thiolase, N-terminal LOS88_12090 IPR016039 Thiolase-like LOS88_12090 IPR002155 Thiolase LOS88_12090 IPR012806 Acetyl-CoA C-acyltransferase FadI LOS88_12090 IPR020615 Thiolase, acyl-enzyme intermediate active site LOS88_12095 IPR011703 ATPase, AAA-3 LOS88_12095 IPR041628 ChlI/MoxR, AAA lid domain LOS88_12095 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_12100 IPR002881 Domain of unknown function DUF58 LOS88_12100 IPR036465 von Willebrand factor A-like domain superfamily LOS88_12115 IPR002035 von Willebrand factor, type A LOS88_12115 IPR022933 Uncharacterised protein family UPF0353 LOS88_12115 IPR036465 von Willebrand factor A-like domain superfamily LOS88_12125 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_12125 IPR013324 RNA polymerase sigma factor, region 3/4-like LOS88_12125 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LOS88_12125 IPR007627 RNA polymerase sigma-70 region 2 LOS88_12125 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LOS88_12125 IPR013325 RNA polymerase sigma factor, region 2 LOS88_12125 IPR014284 RNA polymerase sigma-70 like domain LOS88_12125 IPR039425 RNA polymerase sigma-70 like LOS88_12125 IPR014293 RNA polymerase sigma-70, actinobacteria LOS88_12135 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) LOS88_12135 IPR042117 OMPP1/FadL/TodX superfamily LOS88_12140 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) LOS88_12140 IPR042117 OMPP1/FadL/TodX superfamily LOS88_12145 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing LOS88_12145 IPR013976 Metal-dependent hydrolase HDOD LOS88_12145 IPR035919 EAL domain superfamily LOS88_12145 IPR001633 EAL domain LOS88_12150 IPR020616 Thiolase, N-terminal LOS88_12150 IPR020610 Thiolase, active site LOS88_12150 IPR020613 Thiolase, conserved site LOS88_12150 IPR020615 Thiolase, acyl-enzyme intermediate active site LOS88_12150 IPR020617 Thiolase, C-terminal LOS88_12150 IPR002155 Thiolase LOS88_12150 IPR016039 Thiolase-like LOS88_12155 IPR011789 Cu(I)-responsive transcriptional regulator LOS88_12155 IPR009061 Putative DNA-binding domain superfamily LOS88_12155 IPR000551 MerR-type HTH domain LOS88_12155 IPR015358 Transcription regulator MerR, DNA binding LOS88_12160 IPR001021 Ribosomal protein L25, long-form LOS88_12160 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily LOS88_12160 IPR029751 Ribosomal protein L25 LOS88_12160 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal LOS88_12160 IPR020055 Ribosomal protein L25, short-form LOS88_12170 IPR024590 RNA helicase HrpA, C-terminal LOS88_12170 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_12170 IPR001650 Helicase, C-terminal LOS88_12170 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_12170 IPR010222 RNA helicase HrpA LOS88_12170 IPR011709 Domain of unknown function DUF1605 LOS88_12170 IPR011545 DEAD/DEAH box helicase domain LOS88_12170 IPR007502 Helicase-associated domain LOS88_12170 IPR003593 AAA+ ATPase domain LOS88_12175 IPR000644 CBS domain LOS88_12175 IPR001667 DDH domain LOS88_12175 IPR038763 DHH phosphoesterase superfamily LOS88_12175 IPR003156 DHHA1 domain LOS88_12175 IPR002646 Poly A polymerase, head domain LOS88_12180 IPR037522 HD-GYP domain LOS88_12180 IPR006674 HD domain LOS88_12180 IPR006675 HDIG domain LOS88_12180 IPR003607 HD/PDEase domain LOS88_12185 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_12185 IPR024607 Sulfatase, conserved site LOS88_12185 IPR000917 Sulfatase, N-terminal LOS88_12190 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_12190 IPR041628 ChlI/MoxR, AAA lid domain LOS88_12190 IPR011703 ATPase, AAA-3 LOS88_12210 IPR024163 Aerotolerance regulator, N-terminal LOS88_12210 IPR022933 Uncharacterised protein family UPF0353 LOS88_12210 IPR002035 von Willebrand factor, type A LOS88_12210 IPR036465 von Willebrand factor A-like domain superfamily LOS88_12220 IPR036390 Winged helix DNA-binding domain superfamily LOS88_12220 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_12220 IPR000847 Transcription regulator HTH, LysR LOS88_12220 IPR005119 LysR, substrate-binding LOS88_12220 IPR037416 Nodulation protein D, PBP2 LOS88_12225 IPR005532 Sulfatase-modifying factor enzyme LOS88_12225 IPR016187 C-type lectin fold LOS88_12225 IPR042095 Sulfatase-modifying factor enzyme superfamily LOS88_12235 IPR023885 4Fe4S-binding SPASM domain LOS88_12235 IPR007197 Radical SAM LOS88_12235 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme LOS88_12235 IPR013785 Aldolase-type TIM barrel LOS88_12240 IPR034747 Exonuclease I, SH3-like domain LOS88_12240 IPR038649 Exonuclease I, SH3-like domain superfamily LOS88_12240 IPR013620 Exodeoxyribonuclease I, C-terminal LOS88_12240 IPR013520 Exonuclease, RNase T/DNA polymerase III LOS88_12240 IPR036397 Ribonuclease H superfamily LOS88_12240 IPR012337 Ribonuclease H-like superfamily LOS88_12240 IPR023607 Exodeoxyribonuclease I LOS88_12240 IPR034748 Exonuclease I, C-terminal alpha-helical domain LOS88_12250 IPR011013 Galactose mutarotase-like domain superfamily LOS88_12250 IPR017853 Glycoside hydrolase superfamily LOS88_12250 IPR013785 Aldolase-type TIM barrel LOS88_12255 IPR022957 Uncharacterised protein family UPF0299 LOS88_12255 IPR005538 LrgA/CidA family LOS88_12260 IPR007300 CidB/LrgB family LOS88_12260 IPR005261 Conserved hypothetical protein CHP00659 LOS88_12265 IPR020797 Cytidine deaminase, bacteria LOS88_12265 IPR002125 Cytidine and deoxycytidylate deaminase domain LOS88_12265 IPR016192 APOBEC/CMP deaminase, zinc-binding LOS88_12265 IPR016193 Cytidine deaminase-like LOS88_12265 IPR006263 Cytidine deaminase, homodimeric LOS88_12265 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain LOS88_12270 IPR013440 Tryptophanase LOS88_12270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_12270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_12270 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_12270 IPR011166 Beta-eliminating lyase family LOS88_12270 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase LOS88_12280 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily LOS88_12280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_12280 IPR007357 Deoxyribodipyrimidine photolyase-related protein LOS88_12285 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_12285 IPR006076 FAD dependent oxidoreductase LOS88_12285 IPR023080 D-amino acid dehydrogenase DadA LOS88_12290 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site LOS88_12290 IPR036291 NAD(P)-binding domain superfamily LOS88_12290 IPR000534 Semialdehyde dehydrogenase, NAD-binding LOS88_12290 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LOS88_12290 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type LOS88_12290 IPR012080 Aspartate-semialdehyde dehydrogenase LOS88_12295 IPR003786 Sulfur carrier protein FdhD LOS88_12295 IPR016193 Cytidine deaminase-like LOS88_12315 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_12315 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_12330 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_12330 IPR039424 Solute-binding protein family 5 LOS88_12330 IPR023765 Solute-binding protein family 5, conserved site LOS88_12330 IPR000914 Solute-binding protein family 5 domain LOS88_12335 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE LOS88_12335 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily LOS88_12340 IPR000671 Peptidase A31 family LOS88_12340 IPR004419 Peptidase A31, hydrogenase expression/formation protein LOS88_12340 IPR023430 Peptidase HybD-like domain superfamily LOS88_12345 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site LOS88_12345 IPR029014 [NiFe]-hydrogenase, large subunit LOS88_12345 IPR001501 Nickel-dependent hydrogenase, large subunit LOS88_12350 IPR005614 NrfD family LOS88_12355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_12355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_12355 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LOS88_12360 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LOS88_12360 IPR027394 Cytochrome-c3 hydrogenase, C-terminal LOS88_12360 IPR006311 Twin-arginine translocation pathway, signal sequence LOS88_12360 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit LOS88_12360 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily LOS88_12360 IPR001821 [NiFe]-hydrogenase, small subunit LOS88_12360 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily LOS88_12365 IPR012337 Ribonuclease H-like superfamily LOS88_12365 IPR002559 Transposase, IS4-like LOS88_12370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_12370 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_12370 IPR003660 HAMP domain LOS88_12370 IPR011006 CheY-like superfamily LOS88_12370 IPR005467 Histidine kinase domain LOS88_12370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_12370 IPR001789 Signal transduction response regulator, receiver domain LOS88_12370 IPR036641 HPT domain superfamily LOS88_12370 IPR019247 Histidine kinase BarA, N-terminal LOS88_12370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_12370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_12370 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_12390 IPR002559 Transposase, IS4-like LOS88_12390 IPR032806 H repeat-associated protein, N-terminal LOS88_12395 IPR001789 Signal transduction response regulator, receiver domain LOS88_12395 IPR037522 HD-GYP domain LOS88_12395 IPR003607 HD/PDEase domain LOS88_12395 IPR011006 CheY-like superfamily LOS88_12400 IPR002559 Transposase, IS4-like LOS88_12400 IPR032806 H repeat-associated protein, N-terminal LOS88_12405 IPR037522 HD-GYP domain LOS88_12405 IPR003607 HD/PDEase domain LOS88_12410 IPR013515 Phytochrome, central region LOS88_12410 IPR001294 Phytochrome LOS88_12410 IPR029787 Nucleotide cyclase LOS88_12410 IPR000160 GGDEF domain LOS88_12410 IPR029016 GAF-like domain superfamily LOS88_12410 IPR035919 EAL domain superfamily LOS88_12410 IPR001633 EAL domain LOS88_12410 IPR016132 Phytochrome chromophore attachment domain LOS88_12410 IPR003018 GAF domain LOS88_12415 IPR001296 Glycosyl transferase, family 1 LOS88_12415 IPR000368 Sucrose synthase LOS88_12420 IPR001296 Glycosyl transferase, family 1 LOS88_12420 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LOS88_12420 IPR017814 Mycothiol biosynthesis protein, MshA LOS88_12490 IPR036397 Ribonuclease H superfamily LOS88_12490 IPR001598 Transposase, IS30, conserved site LOS88_12490 IPR012337 Ribonuclease H-like superfamily LOS88_12490 IPR001584 Integrase, catalytic core LOS88_12490 IPR009057 Homeobox-like domain superfamily LOS88_12500 IPR012337 Ribonuclease H-like superfamily LOS88_12500 IPR001598 Transposase, IS30, conserved site LOS88_12500 IPR001584 Integrase, catalytic core LOS88_12500 IPR009057 Homeobox-like domain superfamily LOS88_12500 IPR036397 Ribonuclease H superfamily LOS88_12515 IPR001296 Glycosyl transferase, family 1 LOS88_12515 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LOS88_12520 IPR005150 Cellulose synthase LOS88_12520 IPR003919 Cellulose synthase, subunit A LOS88_12520 IPR001173 Glycosyltransferase 2-like LOS88_12520 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_12520 IPR009875 PilZ domain LOS88_12525 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LOS88_12525 IPR003362 Bacterial sugar transferase LOS88_12530 IPR001296 Glycosyl transferase, family 1 LOS88_12535 IPR029787 Nucleotide cyclase LOS88_12535 IPR001789 Signal transduction response regulator, receiver domain LOS88_12535 IPR011006 CheY-like superfamily LOS88_12535 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase LOS88_12565 IPR029151 Periplasmic sensor-like domain superfamily LOS88_12565 IPR015387 LuxQ, periplasmic LOS88_12565 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_12565 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_12565 IPR005467 Histidine kinase domain LOS88_12565 IPR001789 Signal transduction response regulator, receiver domain LOS88_12565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_12565 IPR035965 PAS domain superfamily LOS88_12565 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_12565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_12565 IPR011006 CheY-like superfamily LOS88_12585 IPR009057 Homeobox-like domain superfamily LOS88_12585 IPR006120 Resolvase, HTH domain LOS88_12585 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_12585 IPR006119 Resolvase, N-terminal catalytic domain LOS88_12585 IPR006118 Recombinase, conserved site LOS88_12600 IPR037518 MPN domain LOS88_12600 IPR025657 RadC-like JAB domain LOS88_12600 IPR010994 RuvA domain 2-like LOS88_12600 IPR001405 Uncharacterised protein family UPF0758 LOS88_12600 IPR020891 Uncharacterised protein family UPF0758, conserved site LOS88_12630 IPR003356 DNA methylase, adenine-specific LOS88_12630 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily LOS88_12630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_12650 IPR002781 Transmembrane protein TauE-like LOS88_12655 IPR004754 Amino acid antiporter LOS88_12655 IPR022461 Arginine/ornithine antiporter LOS88_12655 IPR002293 Amino acid/polyamine transporter I LOS88_12660 IPR036291 NAD(P)-binding domain superfamily LOS88_12660 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_12660 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_12660 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LOS88_12665 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain LOS88_12665 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LOS88_12665 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LOS88_12665 IPR011548 3-hydroxyisobutyrate dehydrogenase LOS88_12665 IPR015815 3-hydroxyisobutyrate dehydrogenase-related LOS88_12665 IPR036291 NAD(P)-binding domain superfamily LOS88_12665 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_12665 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site LOS88_12670 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LOS88_12670 IPR001753 Enoyl-CoA hydratase/isomerase LOS88_12670 IPR014748 Enoyl-CoA hydratase, C-terminal LOS88_12670 IPR029045 ClpP/crotonase-like domain superfamily LOS88_12675 IPR001753 Enoyl-CoA hydratase/isomerase LOS88_12675 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LOS88_12675 IPR029045 ClpP/crotonase-like domain superfamily LOS88_12675 IPR014748 Enoyl-CoA hydratase, C-terminal LOS88_12680 IPR006089 Acyl-CoA dehydrogenase, conserved site LOS88_12680 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LOS88_12680 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LOS88_12680 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LOS88_12680 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LOS88_12680 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LOS88_12680 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LOS88_12685 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LOS88_12685 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LOS88_12685 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LOS88_12685 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LOS88_12685 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LOS88_12685 IPR006089 Acyl-CoA dehydrogenase, conserved site LOS88_12685 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LOS88_12690 IPR034733 Acetyl-CoA carboxylase LOS88_12690 IPR029045 ClpP/crotonase-like domain superfamily LOS88_12690 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal LOS88_12690 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal LOS88_12695 IPR014748 Enoyl-CoA hydratase, C-terminal LOS88_12695 IPR001753 Enoyl-CoA hydratase/isomerase LOS88_12695 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LOS88_12695 IPR029045 ClpP/crotonase-like domain superfamily LOS88_12700 IPR011054 Rudiment single hybrid motif LOS88_12700 IPR016185 Pre-ATP-grasp domain superfamily LOS88_12700 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LOS88_12700 IPR000089 Biotin/lipoyl attachment LOS88_12700 IPR011053 Single hybrid motif LOS88_12700 IPR011764 Biotin carboxylation domain LOS88_12700 IPR001882 Biotin-binding site LOS88_12700 IPR011761 ATP-grasp fold LOS88_12700 IPR005481 Biotin carboxylase-like, N-terminal domain LOS88_12700 IPR005482 Biotin carboxylase, C-terminal LOS88_12705 IPR013785 Aldolase-type TIM barrel LOS88_12705 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site LOS88_12705 IPR000891 Pyruvate carboxyltransferase LOS88_12710 IPR015358 Transcription regulator MerR, DNA binding LOS88_12710 IPR000551 MerR-type HTH domain LOS88_12710 IPR011789 Cu(I)-responsive transcriptional regulator LOS88_12710 IPR009061 Putative DNA-binding domain superfamily LOS88_12725 IPR000791 Acetate transporter GPR1/FUN34/SatP family LOS88_12730 IPR032806 H repeat-associated protein, N-terminal LOS88_12730 IPR002559 Transposase, IS4-like LOS88_12740 IPR001584 Integrase, catalytic core LOS88_12740 IPR012337 Ribonuclease H-like superfamily LOS88_12740 IPR036397 Ribonuclease H superfamily LOS88_12740 IPR001598 Transposase, IS30, conserved site LOS88_12740 IPR009057 Homeobox-like domain superfamily LOS88_12755 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site LOS88_12755 IPR016102 Succinyl-CoA synthetase-like LOS88_12755 IPR036291 NAD(P)-binding domain superfamily LOS88_12755 IPR005811 ATP-citrate lyase/succinyl-CoA ligase LOS88_12755 IPR003781 CoA-binding LOS88_12755 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site LOS88_12755 IPR005810 Succinyl-CoA ligase, alpha subunit LOS88_12760 IPR005811 ATP-citrate lyase/succinyl-CoA ligase LOS88_12760 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site LOS88_12760 IPR005809 Succinate--CoA synthetase, beta subunit LOS88_12760 IPR016102 Succinyl-CoA synthetase-like LOS88_12760 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type LOS88_12760 IPR011761 ATP-grasp fold LOS88_12760 IPR013815 ATP-grasp fold, subdomain 1 LOS88_12765 IPR006255 Dihydrolipoamide succinyltransferase LOS88_12765 IPR000089 Biotin/lipoyl attachment LOS88_12765 IPR004167 Peripheral subunit-binding domain LOS88_12765 IPR036625 E3-binding domain superfamily LOS88_12765 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LOS88_12765 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LOS88_12765 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LOS88_12765 IPR011053 Single hybrid motif LOS88_12770 IPR005475 Transketolase-like, pyrimidine-binding domain LOS88_12770 IPR011603 2-oxoglutarate dehydrogenase E1 component LOS88_12770 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily LOS88_12770 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal LOS88_12770 IPR001017 Dehydrogenase, E1 component LOS88_12770 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain LOS88_12770 IPR029061 Thiamin diphosphate-binding fold LOS88_12775 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_12775 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_12775 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_12775 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_12775 IPR012675 Beta-grasp domain superfamily LOS88_12775 IPR009051 Alpha-helical ferredoxin LOS88_12775 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein LOS88_12775 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal LOS88_12780 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit LOS88_12780 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LOS88_12780 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LOS88_12780 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LOS88_12780 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site LOS88_12780 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_12780 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LOS88_12780 IPR011281 Succinate dehydrogenase, flavoprotein subunit LOS88_12785 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LOS88_12785 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor LOS88_12785 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit LOS88_12790 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LOS88_12790 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site LOS88_12790 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit LOS88_12790 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit LOS88_12800 IPR010953 Citrate synthase, type I LOS88_12800 IPR036969 Citrate synthase superfamily LOS88_12800 IPR024176 Citrate synthase, bacterial-type LOS88_12800 IPR002020 Citrate synthase LOS88_12800 IPR016143 Citrate synthase-like, small alpha subdomain LOS88_12800 IPR016142 Citrate synthase-like, large alpha subdomain LOS88_12800 IPR019810 Citrate synthase active site LOS88_12810 IPR016181 Acyl-CoA N-acyltransferase LOS88_12810 IPR000182 GNAT domain LOS88_12825 IPR016181 Acyl-CoA N-acyltransferase LOS88_12825 IPR000182 GNAT domain LOS88_12830 IPR016205 Glycerol dehydrogenase LOS88_12830 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LOS88_12830 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LOS88_12835 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase LOS88_12835 IPR004625 Pyridoxine kinase LOS88_12835 IPR023685 Pyridoxal kinase PdxY LOS88_12835 IPR029056 Ribokinase-like LOS88_12850 IPR002942 RNA-binding S4 domain LOS88_12850 IPR036986 RNA-binding S4 domain superfamily LOS88_12860 IPR017871 ABC transporter, conserved site LOS88_12860 IPR003439 ABC transporter-like LOS88_12860 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_12860 IPR036640 ABC transporter type 1, transmembrane domain superfamily LOS88_12860 IPR039421 Type I protein exporter LOS88_12860 IPR003593 AAA+ ATPase domain LOS88_12860 IPR011527 ABC transporter type 1, transmembrane domain LOS88_12865 IPR039421 Type I protein exporter LOS88_12865 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_12865 IPR017871 ABC transporter, conserved site LOS88_12865 IPR036640 ABC transporter type 1, transmembrane domain superfamily LOS88_12865 IPR011527 ABC transporter type 1, transmembrane domain LOS88_12865 IPR003593 AAA+ ATPase domain LOS88_12865 IPR003439 ABC transporter-like LOS88_12870 IPR019247 Histidine kinase BarA, N-terminal LOS88_12870 IPR011006 CheY-like superfamily LOS88_12870 IPR003660 HAMP domain LOS88_12870 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_12870 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_12870 IPR005467 Histidine kinase domain LOS88_12870 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_12870 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_12870 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_12870 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_12870 IPR036641 HPT domain superfamily LOS88_12870 IPR001789 Signal transduction response regulator, receiver domain LOS88_12875 IPR013766 Thioredoxin domain LOS88_12875 IPR017937 Thioredoxin, conserved site LOS88_12875 IPR005746 Thioredoxin LOS88_12875 IPR036249 Thioredoxin-like superfamily LOS88_12880 IPR031312 Sodium/sulphate symporter, conserved site LOS88_12880 IPR001898 Solute carrier family 13 LOS88_12885 IPR011833 Glycogen/starch/alpha-glucan phosphorylase LOS88_12885 IPR035090 Phosphorylase pyridoxal-phosphate attachment site LOS88_12885 IPR000811 Glycosyl transferase, family 35 LOS88_12900 IPR008228 Uncharacterised conserved protein UCP006173 LOS88_12900 IPR005358 Putative zinc- or iron-chelating domain containing protein LOS88_12905 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LOS88_12905 IPR004184 Pyruvate formate lyase domain LOS88_12905 IPR001150 Glycine radical domain LOS88_12905 IPR005949 Formate acetyltransferase LOS88_12910 IPR023271 Aquaporin-like LOS88_12910 IPR000292 Formate/nitrite transporter LOS88_12910 IPR023999 Formate transporter FocA, putative LOS88_12910 IPR024002 Formate/nitrite transporter, conserved site LOS88_12915 IPR041080 YcaO cyclodehydratase, C-terminal LOS88_12915 IPR003776 YcaO-like domain LOS88_12920 IPR018120 Glycoside hydrolase family 1, active site LOS88_12920 IPR017853 Glycoside hydrolase superfamily LOS88_12920 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LOS88_12920 IPR001360 Glycoside hydrolase family 1 LOS88_12925 IPR036390 Winged helix DNA-binding domain superfamily LOS88_12925 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_12925 IPR000847 Transcription regulator HTH, LysR LOS88_12925 IPR005119 LysR, substrate-binding LOS88_12935 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal LOS88_12935 IPR006276 Cobalamin-independent methionine synthase LOS88_12935 IPR038071 UROD/MetE-like superfamily LOS88_12935 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal LOS88_12940 IPR005119 LysR, substrate-binding LOS88_12940 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain LOS88_12940 IPR000847 Transcription regulator HTH, LysR LOS88_12940 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_12940 IPR036390 Winged helix DNA-binding domain superfamily LOS88_12945 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_12945 IPR036390 Winged helix DNA-binding domain superfamily LOS88_12945 IPR005119 LysR, substrate-binding LOS88_12945 IPR000847 Transcription regulator HTH, LysR LOS88_12950 IPR036380 Isochorismatase-like superfamily LOS88_12950 IPR000868 Isochorismatase-like LOS88_12955 IPR011051 RmlC-like cupin domain superfamily LOS88_12955 IPR012093 Pirin LOS88_12955 IPR008778 Pirin, C-terminal domain LOS88_12955 IPR003829 Pirin, N-terminal domain LOS88_12955 IPR014710 RmlC-like jelly roll fold LOS88_12965 IPR000847 Transcription regulator HTH, LysR LOS88_12965 IPR005119 LysR, substrate-binding LOS88_12965 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_12965 IPR036390 Winged helix DNA-binding domain superfamily LOS88_12970 IPR005119 LysR, substrate-binding LOS88_12970 IPR000847 Transcription regulator HTH, LysR LOS88_12970 IPR036390 Winged helix DNA-binding domain superfamily LOS88_12970 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_12975 IPR036291 NAD(P)-binding domain superfamily LOS88_12975 IPR016040 NAD(P)-binding domain LOS88_12985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_12985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_12985 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_12985 IPR006237 L-methionine gamma-lyase LOS88_12985 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LOS88_12990 IPR042099 AMP-dependent synthetase-like superfamily LOS88_12990 IPR020845 AMP-binding, conserved site LOS88_12990 IPR000873 AMP-dependent synthetase/ligase LOS88_12995 IPR014987 Uncharacterised protein family YfcL LOS88_13005 IPR005496 Integral membrane protein TerC LOS88_13010 IPR006664 Outer membrane protein, bacterial LOS88_13010 IPR006665 OmpA-like domain LOS88_13010 IPR036737 OmpA-like domain superfamily LOS88_13015 IPR033417 Periplasmic sensor domain CHASE8 LOS88_13015 IPR000160 GGDEF domain LOS88_13015 IPR003660 HAMP domain LOS88_13015 IPR029787 Nucleotide cyclase LOS88_13025 IPR002912 ACT domain LOS88_13025 IPR003593 AAA+ ATPase domain LOS88_13025 IPR025944 Sigma-54 interaction domain, conserved site LOS88_13025 IPR009057 Homeobox-like domain superfamily LOS88_13025 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13025 IPR000014 PAS domain LOS88_13025 IPR035965 PAS domain superfamily LOS88_13025 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_13025 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LOS88_13025 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_13025 IPR030828 TyrR family, helix-turn-helix domain LOS88_13035 IPR001533 Pterin 4 alpha carbinolamine dehydratase LOS88_13035 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily LOS88_13040 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site LOS88_13040 IPR001273 Aromatic amino acid hydroxylase LOS88_13040 IPR036951 Aromatic amino acid hydroxylase superfamily LOS88_13040 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily LOS88_13040 IPR019774 Aromatic amino acid hydroxylase, C-terminal LOS88_13040 IPR005960 Phenylalanine-4-hydroxylase, monomeric form LOS88_13045 IPR015590 Aldehyde dehydrogenase domain LOS88_13045 IPR017749 1-pyrroline dehydrogenase LOS88_13045 IPR015657 Aminobutyraldehyde dehydrogenase LOS88_13045 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_13045 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LOS88_13045 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_13045 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_13050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_13050 IPR035906 MetI-like superfamily LOS88_13055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_13055 IPR035906 MetI-like superfamily LOS88_13060 IPR003593 AAA+ ATPase domain LOS88_13060 IPR003439 ABC transporter-like LOS88_13060 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13060 IPR013611 Transport-associated OB, type 2 LOS88_13060 IPR017871 ABC transporter, conserved site LOS88_13060 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_13065 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein LOS88_13065 IPR006059 Bacterial extracellular solute-binding protein LOS88_13070 IPR036390 Winged helix DNA-binding domain superfamily LOS88_13070 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_13070 IPR000847 Transcription regulator HTH, LysR LOS88_13070 IPR005119 LysR, substrate-binding LOS88_13075 IPR021147 Protein of unknown function DUF697 LOS88_13075 IPR006507 Uncharacterised protein family UPF0283 LOS88_13080 IPR007413 Protein of unknown function DUF463, YcjX-like protein LOS88_13090 IPR009554 Phage shock protein B LOS88_13095 IPR014319 Phage shock protein, PspA LOS88_13095 IPR007157 PspA/IM30 LOS88_13100 IPR009057 Homeobox-like domain superfamily LOS88_13100 IPR002197 DNA binding HTH domain, Fis-type LOS88_13100 IPR003593 AAA+ ATPase domain LOS88_13100 IPR014317 Transcription activator PspF LOS88_13100 IPR025944 Sigma-54 interaction domain, conserved site LOS88_13100 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_13100 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_13100 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13105 IPR000914 Solute-binding protein family 5 domain LOS88_13105 IPR023765 Solute-binding protein family 5, conserved site LOS88_13105 IPR039424 Solute-binding protein family 5 LOS88_13105 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_13110 IPR035906 MetI-like superfamily LOS88_13110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_13115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_13115 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LOS88_13115 IPR035906 MetI-like superfamily LOS88_13120 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13120 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LOS88_13120 IPR003439 ABC transporter-like LOS88_13120 IPR003593 AAA+ ATPase domain LOS88_13125 IPR003439 ABC transporter-like LOS88_13125 IPR003593 AAA+ ATPase domain LOS88_13125 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13125 IPR017871 ABC transporter, conserved site LOS88_13130 IPR001404 Heat shock protein Hsp90 family LOS88_13130 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_13130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_13130 IPR019805 Heat shock protein Hsp90, conserved site LOS88_13130 IPR037196 HSP90, C-terminal domain LOS88_13130 IPR020575 Heat shock protein Hsp90, N-terminal LOS88_13130 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_13135 IPR023627 Recombination protein RecR LOS88_13135 IPR000093 DNA recombination protein RecR LOS88_13135 IPR023628 Recombination protein RecR, C4-type zinc finger LOS88_13135 IPR006171 TOPRIM domain LOS88_13135 IPR034137 RecR, TOPRIM domain LOS88_13145 IPR019660 Putative sensory transduction regulator YbjN LOS88_13155 IPR001267 Thymidine kinase LOS88_13155 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13155 IPR020633 Thymidine kinase, conserved site LOS88_13160 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LOS88_13165 IPR001801 Histone-like protein H-NS LOS88_13165 IPR027444 Histone-like protein H-NS, C-terminal domain LOS88_13165 IPR027454 Histone-like protein H-NS, N-terminal LOS88_13165 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LOS88_13170 IPR036451 Cobalamin adenosyltransferase-like superfamily LOS88_13170 IPR016030 Cobalamin adenosyltransferase-like LOS88_13170 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type LOS88_13175 IPR024530 Putative quorum-sensing-regulated virulence factor LOS88_13180 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria LOS88_13180 IPR024924 7-carboxy-7-deazaguanine synthase-like LOS88_13180 IPR013785 Aldolase-type TIM barrel LOS88_13180 IPR007197 Radical SAM LOS88_13185 IPR018317 Queuosine biosynthesis protein QueC LOS88_13185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_13200 IPR013785 Aldolase-type TIM barrel LOS88_13200 IPR011060 Ribulose-phosphate binding barrel LOS88_13200 IPR001754 Orotidine 5'-phosphate decarboxylase domain LOS88_13200 IPR014732 Orotidine 5'-phosphate decarboxylase LOS88_13200 IPR018089 Orotidine 5'-phosphate decarboxylase, active site LOS88_13205 IPR041166 LapB, rubredoxin metal binding domain LOS88_13205 IPR019734 Tetratricopeptide repeat LOS88_13205 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_13205 IPR013026 Tetratricopeptide repeat-containing domain LOS88_13205 IPR030865 Lipopolysaccharide assembly protein B LOS88_13215 IPR005685 Integration host factor, beta subunit LOS88_13215 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LOS88_13215 IPR020816 Histone-like DNA-binding protein, conserved site LOS88_13215 IPR000119 Histone-like DNA-binding protein LOS88_13220 IPR022967 RNA-binding domain, S1 LOS88_13220 IPR000110 Ribosomal protein S1 LOS88_13220 IPR012340 Nucleic acid-binding, OB-fold LOS88_13220 IPR003029 S1 domain LOS88_13225 IPR003136 Cytidylate kinase LOS88_13225 IPR011994 Cytidylate kinase domain LOS88_13225 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13230 IPR036144 RibA-like superfamily LOS88_13230 IPR000926 GTP cyclohydrolase II, RibA LOS88_13230 IPR032677 GTP cyclohydrolase II LOS88_13235 IPR036390 Winged helix DNA-binding domain superfamily LOS88_13235 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_13235 IPR000847 Transcription regulator HTH, LysR LOS88_13235 IPR005119 LysR, substrate-binding LOS88_13240 IPR005119 LysR, substrate-binding LOS88_13240 IPR000847 Transcription regulator HTH, LysR LOS88_13240 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_13240 IPR036390 Winged helix DNA-binding domain superfamily LOS88_13245 IPR005829 Sugar transporter, conserved site LOS88_13245 IPR036259 MFS transporter superfamily LOS88_13245 IPR020846 Major facilitator superfamily domain LOS88_13245 IPR011701 Major facilitator superfamily LOS88_13265 IPR011540 AbgT, Proteobacteria LOS88_13265 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT LOS88_13270 IPR035919 EAL domain superfamily LOS88_13270 IPR000160 GGDEF domain LOS88_13270 IPR005330 MHYT domain LOS88_13270 IPR029787 Nucleotide cyclase LOS88_13270 IPR000014 PAS domain LOS88_13270 IPR035965 PAS domain superfamily LOS88_13270 IPR001633 EAL domain LOS88_13275 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_13275 IPR036390 Winged helix DNA-binding domain superfamily LOS88_13275 IPR000847 Transcription regulator HTH, LysR LOS88_13275 IPR005119 LysR, substrate-binding LOS88_13280 IPR003607 HD/PDEase domain LOS88_13280 IPR001789 Signal transduction response regulator, receiver domain LOS88_13280 IPR037522 HD-GYP domain LOS88_13280 IPR011006 CheY-like superfamily LOS88_13290 IPR023603 Threonine aldolase LOS88_13290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_13290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_13290 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_13290 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase LOS88_13295 IPR036291 NAD(P)-binding domain superfamily LOS88_13295 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_13305 IPR023210 NADP-dependent oxidoreductase domain LOS88_13305 IPR020471 Aldo/keto reductase LOS88_13305 IPR036812 NADP-dependent oxidoreductase domain superfamily LOS88_13310 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LOS88_13310 IPR035979 RNA-binding domain superfamily LOS88_13310 IPR000504 RNA recognition motif domain LOS88_13320 IPR003439 ABC transporter-like LOS88_13320 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13320 IPR017871 ABC transporter, conserved site LOS88_13320 IPR003593 AAA+ ATPase domain LOS88_13320 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LOS88_13325 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_13325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_13325 IPR035906 MetI-like superfamily LOS88_13330 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LOS88_13330 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_13330 IPR001320 Ionotropic glutamate receptor LOS88_13330 IPR018313 Solute-binding protein family 3, conserved site LOS88_13335 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_13335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_13335 IPR035906 MetI-like superfamily LOS88_13340 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LOS88_13340 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase LOS88_13350 IPR007621 TPM domain LOS88_13365 IPR000540 Flagellar motor protein MotA, conserved site LOS88_13365 IPR002898 MotA/TolQ/ExbB proton channel LOS88_13370 IPR036737 OmpA-like domain superfamily LOS88_13370 IPR025713 Motility protein B, N-terminal domain LOS88_13370 IPR006665 OmpA-like domain LOS88_13375 IPR010917 TonB-dependent receptor, conserved site LOS88_13375 IPR039426 Vitamin B12 transporter BtuB-like LOS88_13375 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LOS88_13375 IPR010916 TonB box, conserved site LOS88_13375 IPR000531 TonB-dependent receptor-like, beta-barrel LOS88_13375 IPR037066 TonB-dependent receptor, plug domain superfamily LOS88_13375 IPR012910 TonB-dependent receptor, plug domain LOS88_13380 IPR029058 Alpha/Beta hydrolase fold LOS88_13380 IPR002471 Peptidase S9, serine active site LOS88_13380 IPR023302 Peptidase S9A, N-terminal domain LOS88_13380 IPR002470 Peptidase S9A, prolyl oligopeptidase LOS88_13380 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain LOS88_13400 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid LOS88_13400 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 LOS88_13400 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily LOS88_13405 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit LOS88_13405 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit LOS88_13410 IPR023062 NADH dehydrogenase, subunit CD LOS88_13410 IPR010218 NADH dehydrogenase, subunit C LOS88_13410 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily LOS88_13410 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily LOS88_13410 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit LOS88_13410 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site LOS88_13410 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H LOS88_13410 IPR029014 [NiFe]-hydrogenase, large subunit LOS88_13410 IPR001135 NADH-quinone oxidoreductase, subunit D LOS88_13415 IPR002023 NADH-quinone oxidoreductase subunit E-like LOS88_13415 IPR042128 NuoE domain LOS88_13415 IPR036249 Thioredoxin-like superfamily LOS88_13415 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal LOS88_13420 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily LOS88_13420 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily LOS88_13420 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain LOS88_13420 IPR011537 NADH ubiquinone oxidoreductase, F subunit LOS88_13420 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site LOS88_13420 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain LOS88_13425 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_13425 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_13425 IPR006656 Molybdopterin oxidoreductase LOS88_13425 IPR009010 Aspartate decarboxylase-like domain superfamily LOS88_13425 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding LOS88_13425 IPR010228 NADH:ubiquinone oxidoreductase, subunit G LOS88_13425 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site LOS88_13425 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site LOS88_13425 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LOS88_13430 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site LOS88_13430 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H LOS88_13435 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_13435 IPR010226 NADH-quinone oxidoreductase, chain I LOS88_13435 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_13440 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 LOS88_13440 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ LOS88_13445 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like LOS88_13445 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K LOS88_13450 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LOS88_13450 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LOS88_13450 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup LOS88_13450 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 LOS88_13455 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LOS88_13455 IPR003918 NADH:ubiquinone oxidoreductase LOS88_13455 IPR010227 NADH-quinone oxidoreductase, chain M/4 LOS88_13460 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 LOS88_13460 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LOS88_13465 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily LOS88_13465 IPR036921 PurM-like, N-terminal domain superfamily LOS88_13465 IPR029062 Class I glutamine amidotransferase-like LOS88_13465 IPR017926 Glutamine amidotransferase LOS88_13465 IPR010073 Phosphoribosylformylglycinamidine synthase PurL LOS88_13465 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain LOS88_13465 IPR010918 PurM-like, C-terminal domain LOS88_13465 IPR036676 PurM-like, C-terminal domain superfamily LOS88_13465 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal LOS88_13470 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_13470 IPR023346 Lysozyme-like domain superfamily LOS88_13470 IPR023703 Membrane-bound lytic murein transglycosylase F LOS88_13470 IPR008258 Transglycosylase SLT domain 1 LOS88_13470 IPR000189 Prokaryotic transglycosylase, active site LOS88_13475 IPR029037 YfgJ-like LOS88_13475 IPR010807 Protein of unknown function DUF1407 LOS88_13480 IPR005225 Small GTP-binding protein domain LOS88_13480 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13480 IPR016484 GTP-binding protein EngA LOS88_13480 IPR032859 GTPase Der, C-terminal KH-domain-like LOS88_13480 IPR006073 GTP binding domain LOS88_13480 IPR031166 EngA-type guanine nucleotide-binding (G) domain LOS88_13480 IPR015946 K homology domain-like, alpha/beta LOS88_13485 IPR017687 Outer membrane protein assembly factor BamB LOS88_13485 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LOS88_13485 IPR002372 Pyrrolo-quinoline quinone repeat LOS88_13485 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LOS88_13485 IPR015943 WD40/YVTN repeat-like-containing domain superfamily LOS88_13490 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_13490 IPR018704 Tetratricopeptide repeat-like domain LOS88_13490 IPR026039 Uncharacterised protein family UPF0070 LOS88_13495 IPR033656 Histidyl-anticodon-binding LOS88_13495 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit LOS88_13495 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain LOS88_13495 IPR036621 Anticodon-binding domain superfamily LOS88_13495 IPR004154 Anticodon-binding LOS88_13495 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_13495 IPR015807 Histidine-tRNA ligase LOS88_13500 IPR011005 Dihydropteroate synthase-like LOS88_13500 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial LOS88_13500 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type LOS88_13505 IPR001387 Cro/C1-type helix-turn-helix domain LOS88_13505 IPR023690 Cytoskeleton protein RodZ LOS88_13505 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_13505 IPR025194 Domain of unknown function DUF4115 LOS88_13515 IPR007197 Radical SAM LOS88_13515 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr LOS88_13515 IPR027492 Dual-specificity RNA methyltransferase RlmN LOS88_13515 IPR040072 Methyltransferase (Class A) LOS88_13515 IPR013785 Aldolase-type TIM barrel LOS88_13520 IPR036850 Nucleoside diphosphate kinase-like domain superfamily LOS88_13520 IPR001564 Nucleoside diphosphate kinase LOS88_13520 IPR023005 Nucleoside diphosphate kinase, active site LOS88_13520 IPR034907 Nucleoside diphosphate kinase-like domain LOS88_13525 IPR001346 Interferon regulatory factor DNA-binding domain LOS88_13525 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LOS88_13525 IPR008330 Peptidase M17, peptidase B LOS88_13525 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LOS88_13530 IPR001346 Interferon regulatory factor DNA-binding domain LOS88_13530 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LOS88_13530 IPR008330 Peptidase M17, peptidase B LOS88_13530 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LOS88_13535 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria LOS88_13535 IPR018298 Adrenodoxin, iron-sulphur binding site LOS88_13535 IPR012675 Beta-grasp domain superfamily LOS88_13535 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_13535 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_13535 IPR001055 Adrenodoxin LOS88_13540 IPR018181 Heat shock protein 70, conserved site LOS88_13540 IPR042039 HscA chaperone, nucleotide-binding domain LOS88_13540 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily LOS88_13540 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily LOS88_13540 IPR013126 Heat shock protein 70 family LOS88_13540 IPR010236 ISC system FeS cluster assembly, HscA chaperone LOS88_13545 IPR001623 DnaJ domain LOS88_13545 IPR004640 Co-chaperone Hsc20 LOS88_13545 IPR036386 HscB, C-terminal domain superfamily LOS88_13545 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain LOS88_13545 IPR036869 Chaperone J-domain superfamily LOS88_13550 IPR035903 HesB-like domain superfamily LOS88_13550 IPR011302 Iron-binding protein IscA, proteobacteria LOS88_13550 IPR016092 FeS cluster insertion protein LOS88_13550 IPR000361 FeS cluster biogenesis LOS88_13550 IPR017870 FeS cluster insertion, C-terminal, conserved site LOS88_13555 IPR011339 ISC system FeS cluster assembly, IscU scaffold LOS88_13555 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal LOS88_13560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_13560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_13560 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_13560 IPR010240 Cysteine desulfurase IscS LOS88_13560 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LOS88_13560 IPR000192 Aminotransferase class V domain LOS88_13560 IPR016454 Cysteine desulfurase LOS88_13565 IPR010242 Transcription factor HTH, IscR LOS88_13565 IPR030489 Transcription regulator Rrf2-type, conserved site LOS88_13565 IPR000944 Transcription regulator Rrf2-type LOS88_13565 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_13565 IPR036390 Winged helix DNA-binding domain superfamily LOS88_13570 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LOS88_13570 IPR029028 Alpha/beta knot methyltransferases LOS88_13570 IPR004384 RNA methyltransferase TrmJ/LasT LOS88_13570 IPR001537 tRNA/rRNA methyltransferase, SpoU type LOS88_13580 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 LOS88_13580 IPR003033 SCP2 sterol-binding domain LOS88_13580 IPR036527 SCP2 sterol-binding domain superfamily LOS88_13580 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT LOS88_13585 IPR001539 Peptidase U32 LOS88_13585 IPR036206 Thiamin phosphate synthase superfamily LOS88_13590 IPR001539 Peptidase U32 LOS88_13595 IPR023605 Lipoprotein NlpI LOS88_13595 IPR013026 Tetratricopeptide repeat-containing domain LOS88_13595 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_13595 IPR013105 Tetratricopeptide repeat 2 LOS88_13595 IPR019734 Tetratricopeptide repeat LOS88_13605 IPR005665 Protein-export membrane protein SecF, bacterial LOS88_13605 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LOS88_13605 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LOS88_13605 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LOS88_13610 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LOS88_13610 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LOS88_13610 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LOS88_13610 IPR001036 Acriflavin resistance protein LOS88_13610 IPR005791 Protein translocase subunit SecD LOS88_13610 IPR027398 SecD export protein N-terminal TM domain LOS88_13615 IPR003849 Preprotein translocase YajC LOS88_13620 IPR002616 tRNA-guanine(15) transglycosylase-like LOS88_13620 IPR036511 Queuine tRNA-ribosyltransferase-like LOS88_13620 IPR004803 tRNA-guanine transglycosylase LOS88_13625 IPR042118 QueA, domain 1 LOS88_13625 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA LOS88_13625 IPR042119 QueA, domain 2 LOS88_13625 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily LOS88_13630 IPR000644 CBS domain LOS88_13640 IPR036249 Thioredoxin-like superfamily LOS88_13640 IPR013766 Thioredoxin domain LOS88_13640 IPR019479 Peroxiredoxin, C-terminal LOS88_13640 IPR024706 Peroxiredoxin, AhpC-type LOS88_13640 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LOS88_13640 IPR017559 Alkyl hydroperoxide reductase subunit C LOS88_13645 IPR012081 Alkyl hydroperoxide reductase subunit F LOS88_13645 IPR023753 FAD/NAD(P)-binding domain LOS88_13645 IPR002109 Glutaredoxin LOS88_13645 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LOS88_13645 IPR012336 Thioredoxin-like fold LOS88_13645 IPR036249 Thioredoxin-like superfamily LOS88_13645 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_13695 IPR006144 Secretion protein HlyD, conserved site LOS88_13695 IPR010129 Type I secretion membrane fusion protein, HlyD family LOS88_13700 IPR011527 ABC transporter type 1, transmembrane domain LOS88_13700 IPR039421 Type I protein exporter LOS88_13700 IPR039395 Peptidase C39-like A LOS88_13700 IPR005074 Peptidase C39, bacteriocin processing LOS88_13700 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13700 IPR010132 ATPase, type I secretion system, HlyB LOS88_13700 IPR017871 ABC transporter, conserved site LOS88_13700 IPR003439 ABC transporter-like LOS88_13700 IPR036640 ABC transporter type 1, transmembrane domain superfamily LOS88_13700 IPR003593 AAA+ ATPase domain LOS88_13705 IPR007197 Radical SAM LOS88_13705 IPR032432 Radical SAM, C-terminal extension LOS88_13705 IPR006638 Elp3/MiaB/NifB LOS88_13705 IPR039661 ELP3/YhcC LOS88_13705 IPR023404 Radical SAM, alpha/beta horseshoe LOS88_13705 IPR005911 Protein YhcC-like LOS88_13710 IPR029055 Nucleophile aminohydrolases, N-terminal LOS88_13710 IPR002932 Glutamate synthase domain LOS88_13710 IPR013785 Aldolase-type TIM barrel LOS88_13710 IPR017932 Glutamine amidotransferase type 2 domain LOS88_13710 IPR002489 Glutamate synthase, alpha subunit, C-terminal LOS88_13710 IPR006982 Glutamate synthase, central-N LOS88_13710 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily LOS88_13715 IPR028261 Dihydroprymidine dehydrogenase domain II LOS88_13715 IPR009051 Alpha-helical ferredoxin LOS88_13715 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 LOS88_13715 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_13715 IPR023753 FAD/NAD(P)-binding domain LOS88_13715 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_13725 IPR001650 Helicase, C-terminal LOS88_13725 IPR028622 ATP-dependent RNA helicase RhlE LOS88_13725 IPR011545 DEAD/DEAH box helicase domain LOS88_13725 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13725 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_13725 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_13725 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_13740 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_13740 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13740 IPR030389 FeoB-type guanine nucleotide-binding (G) domain LOS88_13740 IPR011640 Ferrous iron transport protein B, C-terminal LOS88_13740 IPR003373 Ferrous iron transport protein B LOS88_13740 IPR006073 GTP binding domain LOS88_13750 IPR005872 Archaeal/bacterial translation initiation factor SUI1 LOS88_13750 IPR036877 SUI1 domain superfamily LOS88_13750 IPR001950 SUI1 domain LOS88_13755 IPR001727 Gdt1 family LOS88_13790 IPR002559 Transposase, IS4-like LOS88_13790 IPR032806 H repeat-associated protein, N-terminal LOS88_13815 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase LOS88_13815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_13815 IPR032678 tRNA synthetases class I, catalytic domain LOS88_13815 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LOS88_13815 IPR015803 Cysteine-tRNA ligase LOS88_13815 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR LOS88_13820 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase LOS88_13820 IPR029000 Cyclophilin-like domain superfamily LOS88_13820 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site LOS88_13820 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain LOS88_13830 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LOS88_13830 IPR029052 Metallo-dependent phosphatase-like LOS88_13830 IPR010138 UDP-2,3-diacylglucosamine hydrolase LOS88_13840 IPR007341 Transglycosylase-associated protein LOS88_13845 IPR013727 Two-component sensor kinase, N-terminal LOS88_13845 IPR005467 Histidine kinase domain LOS88_13845 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_13845 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_13845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_13845 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_13845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_13850 IPR011006 CheY-like superfamily LOS88_13850 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_13850 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_13850 IPR001789 Signal transduction response regulator, receiver domain LOS88_13850 IPR039420 Transcriptional regulatory protein WalR-like LOS88_13850 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_13865 IPR002823 Protein of unknown function DUF112, transmembrane LOS88_13870 IPR001598 Transposase, IS30, conserved site LOS88_13870 IPR036397 Ribonuclease H superfamily LOS88_13870 IPR012337 Ribonuclease H-like superfamily LOS88_13870 IPR001584 Integrase, catalytic core LOS88_13870 IPR009057 Homeobox-like domain superfamily LOS88_13880 IPR002559 Transposase, IS4-like LOS88_13880 IPR032806 H repeat-associated protein, N-terminal LOS88_13885 IPR025668 Transposase DDE domain LOS88_13895 IPR014036 DeoR C-terminal sensor domain LOS88_13895 IPR001034 DeoR-type HTH domain LOS88_13895 IPR037171 NagB/RpiA transferase-like LOS88_13895 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LOS88_13895 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_13895 IPR036390 Winged helix DNA-binding domain superfamily LOS88_13905 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_13905 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_13905 IPR002611 IstB-like ATP-binding protein LOS88_13905 IPR003593 AAA+ ATPase domain LOS88_13905 IPR001270 ClpA/B family LOS88_13910 IPR017894 HTH domain, IS21 transposase-type LOS88_13910 IPR001584 Integrase, catalytic core LOS88_13910 IPR006120 Resolvase, HTH domain LOS88_13910 IPR012337 Ribonuclease H-like superfamily LOS88_13910 IPR036397 Ribonuclease H superfamily LOS88_13935 IPR020808 Bacterial microcompartments protein, conserved site LOS88_13935 IPR000249 Microcompartment protein, bacteria LOS88_13935 IPR037233 CcmK-like superfamily LOS88_13940 IPR037233 CcmK-like superfamily LOS88_13940 IPR020808 Bacterial microcompartments protein, conserved site LOS88_13940 IPR000249 Microcompartment protein, bacteria LOS88_13945 IPR037233 CcmK-like superfamily LOS88_13945 IPR020808 Bacterial microcompartments protein, conserved site LOS88_13945 IPR000249 Microcompartment protein, bacteria LOS88_13950 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_13950 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_13950 IPR015590 Aldehyde dehydrogenase domain LOS88_13950 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_13950 IPR039697 Iron-type alcohol dehydrogenase-like LOS88_13950 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LOS88_13950 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LOS88_13950 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain LOS88_13950 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase LOS88_13960 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain LOS88_13960 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LOS88_13960 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LOS88_13960 IPR039697 Iron-type alcohol dehydrogenase-like LOS88_13960 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_13960 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_13960 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase LOS88_13960 IPR015590 Aldehyde dehydrogenase domain LOS88_13960 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_13965 IPR030897 Choline trimethylamine-lyase LOS88_13965 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LOS88_13965 IPR001150 Glycine radical domain LOS88_13965 IPR004184 Pyruvate formate lyase domain LOS88_13975 IPR012337 Ribonuclease H-like superfamily LOS88_13975 IPR001584 Integrase, catalytic core LOS88_13975 IPR036397 Ribonuclease H superfamily LOS88_13975 IPR009057 Homeobox-like domain superfamily LOS88_13975 IPR001598 Transposase, IS30, conserved site LOS88_13985 IPR032806 H repeat-associated protein, N-terminal LOS88_13985 IPR002559 Transposase, IS4-like LOS88_13995 IPR037233 CcmK-like superfamily LOS88_13995 IPR000249 Microcompartment protein, bacteria LOS88_13995 IPR020808 Bacterial microcompartments protein, conserved site LOS88_14000 IPR009010 Aspartate decarboxylase-like domain superfamily LOS88_14000 IPR008300 Phosphate propanoyltransferase LOS88_14010 IPR000390 Small multidrug resistance protein family LOS88_14015 IPR000390 Small multidrug resistance protein family LOS88_14045 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14045 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_14045 IPR002611 IstB-like ATP-binding protein LOS88_14045 IPR003593 AAA+ ATPase domain LOS88_14050 IPR036397 Ribonuclease H superfamily LOS88_14050 IPR001584 Integrase, catalytic core LOS88_14050 IPR012337 Ribonuclease H-like superfamily LOS88_14050 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type LOS88_14075 IPR010998 Integrase/recombinase, N-terminal LOS88_14075 IPR038488 Integrase, DNA-binding domain superfamily LOS88_14075 IPR002104 Integrase, catalytic domain LOS88_14075 IPR013762 Integrase-like, catalytic domain superfamily LOS88_14075 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_14075 IPR025166 Integrase, DNA-binding domain LOS88_14095 IPR000462 CDP-alcohol phosphatidyltransferase LOS88_14095 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial LOS88_14095 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase LOS88_14100 IPR001943 UVR domain LOS88_14100 IPR038476 UvrC homology region 2 superfamily LOS88_14100 IPR001162 UvrC family homology region LOS88_14100 IPR004791 UvrABC system, subunit C LOS88_14100 IPR035901 GIY-YIG endonuclease superfamily LOS88_14100 IPR010994 RuvA domain 2-like LOS88_14100 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LOS88_14100 IPR000305 GIY-YIG endonuclease LOS88_14100 IPR036876 UVR domain superfamily LOS88_14105 IPR011006 CheY-like superfamily LOS88_14105 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_14105 IPR001789 Signal transduction response regulator, receiver domain LOS88_14105 IPR000792 Transcription regulator LuxR, C-terminal LOS88_14110 IPR003329 Acylneuraminate cytidylyltransferase LOS88_14110 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase LOS88_14110 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_14115 IPR005651 Trm112-like LOS88_14120 IPR003758 Tetraacyldisaccharide 4'-kinase LOS88_14120 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14125 IPR039421 Type I protein exporter LOS88_14125 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14125 IPR011917 ABC transporter, lipid A export, MsbA LOS88_14125 IPR003593 AAA+ ATPase domain LOS88_14125 IPR011527 ABC transporter type 1, transmembrane domain LOS88_14125 IPR036640 ABC transporter type 1, transmembrane domain superfamily LOS88_14125 IPR003439 ABC transporter-like LOS88_14125 IPR017871 ABC transporter, conserved site LOS88_14130 IPR004477 ComEC/Rec2-related protein LOS88_14130 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LOS88_14130 IPR001279 Metallo-beta-lactamase LOS88_14130 IPR004797 Competence protein ComEC/Rec2 LOS88_14130 IPR035681 ComA-like, MBL domain LOS88_14145 IPR004839 Aminotransferase, class I/classII LOS88_14145 IPR000796 Aspartate/other aminotransferase LOS88_14145 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LOS88_14145 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_14145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_14145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_14155 IPR005119 LysR, substrate-binding LOS88_14155 IPR020890 Transcription regulator HTH, HdfR LOS88_14155 IPR000847 Transcription regulator HTH, LysR LOS88_14155 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_14155 IPR036390 Winged helix DNA-binding domain superfamily LOS88_14160 IPR007335 Protein of unknown function DUF413 LOS88_14165 IPR005658 Proteinase inhibitor I11, ecotin LOS88_14165 IPR027438 Ecotin, C-terminal LOS88_14165 IPR036198 Ecotin superfamily LOS88_14165 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria LOS88_14170 IPR030395 Glycerophosphodiester phosphodiesterase domain LOS88_14170 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LOS88_14175 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_14175 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase LOS88_14175 IPR031656 Alpha-glycerophosphate oxidase, C-terminal LOS88_14175 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily LOS88_14175 IPR006076 FAD dependent oxidoreductase LOS88_14180 IPR036390 Winged helix DNA-binding domain superfamily LOS88_14180 IPR001034 DeoR-type HTH domain LOS88_14180 IPR014036 DeoR C-terminal sensor domain LOS88_14180 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LOS88_14180 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_14180 IPR037171 NagB/RpiA transferase-like LOS88_14190 IPR022357 Major intrinsic protein, conserved site LOS88_14190 IPR023271 Aquaporin-like LOS88_14190 IPR000425 Major intrinsic protein LOS88_14195 IPR018485 Carbohydrate kinase, FGGY, C-terminal LOS88_14195 IPR018483 Carbohydrate kinase, FGGY, conserved site LOS88_14195 IPR018484 Carbohydrate kinase, FGGY, N-terminal LOS88_14195 IPR005999 Glycerol kinase LOS88_14195 IPR000577 Carbohydrate kinase, FGGY LOS88_14200 IPR033479 Double Cache domain 1 LOS88_14200 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_14200 IPR003660 HAMP domain LOS88_14210 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_14210 IPR000847 Transcription regulator HTH, LysR LOS88_14210 IPR005119 LysR, substrate-binding LOS88_14210 IPR036390 Winged helix DNA-binding domain superfamily LOS88_14235 IPR036259 MFS transporter superfamily LOS88_14235 IPR020846 Major facilitator superfamily domain LOS88_14235 IPR011701 Major facilitator superfamily LOS88_14240 IPR029039 Flavoprotein-like superfamily LOS88_14240 IPR003680 Flavodoxin-like fold LOS88_14255 IPR036237 Xylose isomerase-like superfamily LOS88_14255 IPR007801 Uncharacterised protein family UPF0276 LOS88_14275 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LOS88_14280 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LOS88_14285 IPR036390 Winged helix DNA-binding domain superfamily LOS88_14285 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_14285 IPR000524 Transcription regulator HTH, GntR LOS88_14285 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_14285 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_14285 IPR004839 Aminotransferase, class I/classII LOS88_14285 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_14295 IPR007486 Inner membrane protein YebE LOS88_14295 IPR029024 TerB-like LOS88_14300 IPR006683 Thioesterase domain LOS88_14300 IPR029069 HotDog domain superfamily LOS88_14300 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain LOS88_14300 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase LOS88_14305 IPR019630 Protein of unknown function DUF2496, YbaM-related LOS88_14310 IPR005119 LysR, substrate-binding LOS88_14310 IPR000847 Transcription regulator HTH, LysR LOS88_14310 IPR036390 Winged helix DNA-binding domain superfamily LOS88_14310 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_14315 IPR004747 Cyanate transport system protein LOS88_14315 IPR011701 Major facilitator superfamily LOS88_14315 IPR020846 Major facilitator superfamily domain LOS88_14315 IPR036259 MFS transporter superfamily LOS88_14320 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LOS88_14320 IPR036986 RNA-binding S4 domain superfamily LOS88_14320 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_14320 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_14320 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LOS88_14320 IPR002942 RNA-binding S4 domain LOS88_14320 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LOS88_14330 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LOS88_14330 IPR022858 Metallothiol transferase FosB LOS88_14330 IPR037523 Vicinal oxygen chelate (VOC) domain LOS88_14330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LOS88_14340 IPR006935 Helicase/UvrB, N-terminal LOS88_14340 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_14340 IPR001650 Helicase, C-terminal LOS88_14340 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14340 IPR011332 Zinc-binding ribosomal protein LOS88_14345 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA LOS88_14345 IPR003667 NqrDE/RnfAE LOS88_14350 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria LOS88_14350 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB LOS88_14350 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_14350 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_14350 IPR007202 4Fe-4S domain LOS88_14355 IPR009051 Alpha-helical ferredoxin LOS88_14355 IPR019554 Soluble ligand binding domain LOS88_14355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_14355 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain LOS88_14355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_14355 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily LOS88_14355 IPR026902 RnfC Barrel sandwich hybrid domain LOS88_14355 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC LOS88_14360 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D LOS88_14360 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD LOS88_14365 IPR007329 FMN-binding LOS88_14365 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG LOS88_14370 IPR010968 Ion-translocating oxidoreductase complex subunit E LOS88_14370 IPR003667 NqrDE/RnfAE LOS88_14375 IPR004035 Endonuclease III, iron-sulphur binding site LOS88_14375 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif LOS88_14375 IPR011257 DNA glycosylase LOS88_14375 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LOS88_14375 IPR005759 Endonuclease III LOS88_14375 IPR000445 Helix-hairpin-helix motif LOS88_14375 IPR003265 HhH-GPD domain LOS88_14375 IPR004036 Endonuclease III-like, conserved site-2 LOS88_14380 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LOS88_14380 IPR004361 Glyoxalase I LOS88_14380 IPR037523 Vicinal oxygen chelate (VOC) domain LOS88_14380 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LOS88_14380 IPR018146 Glyoxalase I, conserved site LOS88_14385 IPR041544 MotY N-terminal domain LOS88_14385 IPR006665 OmpA-like domain LOS88_14385 IPR006690 Outer membrane protein, OmpA-like, conserved site LOS88_14385 IPR036737 OmpA-like domain superfamily LOS88_14420 IPR002299 Porin, Neisseria sp. type LOS88_14420 IPR023614 Porin domain superfamily LOS88_14420 IPR033900 Porin domain, Gram-negative type LOS88_14425 IPR010614 DEAD2 LOS88_14425 IPR006555 ATP-dependent helicase, C-terminal LOS88_14425 IPR039000 ATP-dependent DNA helicase DinG LOS88_14425 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14425 IPR001650 Helicase, C-terminal LOS88_14425 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type LOS88_14435 IPR000286 Histone deacetylase family LOS88_14435 IPR023696 Ureohydrolase domain superfamily LOS88_14435 IPR037138 Histone deacetylase domain superfamily LOS88_14435 IPR023801 Histone deacetylase domain LOS88_14440 IPR016478 GTPase, MTG1 LOS88_14440 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LOS88_14440 IPR019991 GTP-binding protein, ribosome biogenesis LOS88_14440 IPR006073 GTP binding domain LOS88_14440 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14440 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily LOS88_14445 IPR001952 Alkaline phosphatase LOS88_14445 IPR018299 Alkaline phosphatase, active site LOS88_14445 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_14450 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_14450 IPR001952 Alkaline phosphatase LOS88_14450 IPR018299 Alkaline phosphatase, active site LOS88_14465 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LOS88_14465 IPR028625 Regulator of nucleoside diphosphate kinase LOS88_14465 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain LOS88_14465 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LOS88_14465 IPR023459 Transcription elongation factor GreA/GreB family LOS88_14470 IPR011006 CheY-like superfamily LOS88_14470 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_14470 IPR001789 Signal transduction response regulator, receiver domain LOS88_14470 IPR000792 Transcription regulator LuxR, C-terminal LOS88_14475 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_14475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_14475 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LOS88_14475 IPR005467 Histidine kinase domain LOS88_14475 IPR007895 MASE1 LOS88_14480 IPR000849 Sugar phosphate transporter LOS88_14480 IPR021159 Glycerate/sugar phosphate transporter, conserved site LOS88_14480 IPR036259 MFS transporter superfamily LOS88_14480 IPR020846 Major facilitator superfamily domain LOS88_14480 IPR011701 Major facilitator superfamily LOS88_14485 IPR029787 Nucleotide cyclase LOS88_14485 IPR000014 PAS domain LOS88_14485 IPR000160 GGDEF domain LOS88_14485 IPR000700 PAS-associated, C-terminal LOS88_14485 IPR035965 PAS domain superfamily LOS88_14485 IPR013656 PAS fold-4 LOS88_14490 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_14490 IPR018313 Solute-binding protein family 3, conserved site LOS88_14490 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LOS88_14490 IPR001320 Ionotropic glutamate receptor LOS88_14495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_14495 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_14495 IPR035906 MetI-like superfamily LOS88_14500 IPR003593 AAA+ ATPase domain LOS88_14500 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LOS88_14500 IPR003439 ABC transporter-like LOS88_14500 IPR017871 ABC transporter, conserved site LOS88_14500 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14510 IPR006694 Fatty acid hydroxylase LOS88_14515 IPR004754 Amino acid antiporter LOS88_14515 IPR002293 Amino acid/polyamine transporter I LOS88_14520 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LOS88_14520 IPR004223 Vitamin B12-dependent methionine synthase, activation domain LOS88_14520 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily LOS88_14520 IPR036594 Methionine synthase domain LOS88_14520 IPR011822 Cobalamin-dependent methionine synthase LOS88_14520 IPR033706 Methionine synthase, B12-binding domain LOS88_14520 IPR036589 Homocysteine-binding domain superfamily LOS88_14520 IPR003726 Homocysteine-binding domain LOS88_14520 IPR011005 Dihydropteroate synthase-like LOS88_14520 IPR036724 Cobalamin-binding domain superfamily LOS88_14520 IPR006158 Cobalamin (vitamin B12)-binding domain LOS88_14520 IPR000489 Pterin-binding domain LOS88_14530 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_14530 IPR000644 CBS domain LOS88_14530 IPR002550 CNNM, transmembrane domain LOS88_14530 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_14530 IPR005170 Transporter-associated domain LOS88_14535 IPR026022 PhoU domain LOS88_14535 IPR038078 PhoU-like domain superfamily LOS88_14535 IPR028366 Phosphate transport system protein PhoU LOS88_14540 IPR005670 Phosphate transport system permease protein 1 LOS88_14540 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14540 IPR017871 ABC transporter, conserved site LOS88_14540 IPR015850 ABC transporter, phosphate import, PstB LOS88_14540 IPR003439 ABC transporter-like LOS88_14540 IPR003593 AAA+ ATPase domain LOS88_14545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_14545 IPR035906 MetI-like superfamily LOS88_14545 IPR005672 Phosphate transport system permease protein PstA LOS88_14550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_14550 IPR035906 MetI-like superfamily LOS88_14550 IPR011864 Phosphate ABC transporter, permease protein PstC LOS88_14555 IPR002125 Cytidine and deoxycytidylate deaminase domain LOS88_14555 IPR028883 tRNA-specific adenosine deaminase LOS88_14555 IPR016192 APOBEC/CMP deaminase, zinc-binding LOS88_14555 IPR016193 Cytidine deaminase-like LOS88_14570 IPR019830 Malate synthase, conserved site LOS88_14570 IPR006252 Malate synthase A LOS88_14570 IPR011076 Malate synthase-like superfamily LOS88_14570 IPR001465 Malate synthase LOS88_14575 IPR039556 ICL/PEPM domain LOS88_14575 IPR006254 Isocitrate lyase LOS88_14575 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site LOS88_14575 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_14575 IPR040442 Pyruvate kinase-like domain superfamily LOS88_14580 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae LOS88_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14580 IPR013317 Chromosomal replication initiator protein DnaA LOS88_14580 IPR017788 DnaA regulatory inactivator Hda LOS88_14580 IPR020591 Chromosomal replication control, initiator DnaA-like LOS88_14590 IPR000836 Phosphoribosyltransferase domain LOS88_14590 IPR029057 Phosphoribosyltransferase-like LOS88_14590 IPR034332 Uracil phosphoribosyltransferase, bacterial-type LOS88_14590 IPR005765 Uracil phosphoribosyl transferase LOS88_14595 IPR036921 PurM-like, N-terminal domain superfamily LOS88_14595 IPR010918 PurM-like, C-terminal domain LOS88_14595 IPR036676 PurM-like, C-terminal domain superfamily LOS88_14595 IPR016188 PurM-like, N-terminal domain LOS88_14595 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase LOS88_14600 IPR036477 Formyl transferase, N-terminal domain superfamily LOS88_14600 IPR002376 Formyl transferase, N-terminal LOS88_14600 IPR004607 Phosphoribosylglycinamide formyltransferase LOS88_14600 IPR001555 Phosphoribosylglycinamide formyltransferase, active site LOS88_14605 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LOS88_14605 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily LOS88_14610 IPR029995 Transcriptional activator SfnR/FlbD LOS88_14610 IPR025944 Sigma-54 interaction domain, conserved site LOS88_14610 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_14610 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LOS88_14610 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_14610 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14610 IPR002197 DNA binding HTH domain, Fis-type LOS88_14610 IPR009057 Homeobox-like domain superfamily LOS88_14610 IPR001789 Signal transduction response regulator, receiver domain LOS88_14610 IPR003593 AAA+ ATPase domain LOS88_14610 IPR011006 CheY-like superfamily LOS88_14615 IPR035965 PAS domain superfamily LOS88_14615 IPR000014 PAS domain LOS88_14615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_14615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_14615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_14615 IPR005467 Histidine kinase domain LOS88_14615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_14615 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_14620 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_14620 IPR002197 DNA binding HTH domain, Fis-type LOS88_14620 IPR009057 Homeobox-like domain superfamily LOS88_14620 IPR010518 Flagellar regulatory FleQ LOS88_14620 IPR011006 CheY-like superfamily LOS88_14620 IPR003593 AAA+ ATPase domain LOS88_14620 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14620 IPR025944 Sigma-54 interaction domain, conserved site LOS88_14620 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LOS88_14620 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_14630 IPR016867 Glycine cleavage system transcriptional repressor LOS88_14630 IPR002912 ACT domain LOS88_14635 IPR041108 Polyphosphate kinase, C-terminal domain 1 LOS88_14635 IPR036832 Polyphosphate kinase N-terminal domain superfamily LOS88_14635 IPR025198 Polyphosphate kinase N-terminal domain LOS88_14635 IPR025200 Polyphosphate kinase C-terminal domain 2 LOS88_14635 IPR036830 Polyphosphate kinase middle domain superfamily LOS88_14635 IPR024953 Polyphosphate kinase middle domain LOS88_14635 IPR001736 Phospholipase D/Transphosphatidylase LOS88_14635 IPR003414 Polyphosphate kinase LOS88_14640 IPR022371 Exopolyphosphatase LOS88_14640 IPR003695 Ppx/GppA phosphatase LOS88_14640 IPR030673 Pyrophosphatase, GppA/Ppx-type LOS88_14645 IPR000644 CBS domain LOS88_14645 IPR006668 Magnesium transporter, MgtE intracellular domain LOS88_14645 IPR038076 MgtE, N-terminal domain superfamily LOS88_14645 IPR038048 Magnesium transporter MgtE, transmembrane domain LOS88_14645 IPR006669 Magnesium transporter MgtE LOS88_14645 IPR006667 SLC41 divalent cation transporters, integral membrane domain LOS88_14645 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily LOS88_14650 IPR013384 Flagellar hook-associated protein 3 LOS88_14650 IPR001029 Flagellin, D0/D1 domain LOS88_14655 IPR002371 Flagellar hook-associated protein 1 LOS88_14655 IPR010810 Flagellin hook, IN motif LOS88_14655 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LOS88_14660 IPR019301 Flagellar protein FlgJ, N-terminal LOS88_14660 IPR013377 Peptidoglycan hydrolase FlgJ LOS88_14660 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain LOS88_14665 IPR001782 Flagellar P-ring protein LOS88_14670 IPR000527 Flagellar L-ring protein LOS88_14675 IPR012834 Flagellar basal-body rod FlgG LOS88_14675 IPR001444 Flagellar basal body rod protein, N-terminal LOS88_14675 IPR019776 Flagellar basal body rod protein, conserved site LOS88_14675 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LOS88_14675 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LOS88_14675 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LOS88_14680 IPR001444 Flagellar basal body rod protein, N-terminal LOS88_14680 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LOS88_14680 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LOS88_14680 IPR019776 Flagellar basal body rod protein, conserved site LOS88_14680 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LOS88_14685 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LOS88_14685 IPR001444 Flagellar basal body rod protein, N-terminal LOS88_14685 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LOS88_14685 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LOS88_14685 IPR037058 Flagellar hook protein FlgE superfamily LOS88_14685 IPR019776 Flagellar basal body rod protein, conserved site LOS88_14685 IPR011491 Flagellar hook protein FlgE LOS88_14690 IPR005648 Flagellar hook capping protein LOS88_14690 IPR025963 FlgD Tudor-like domain LOS88_14690 IPR025965 FlgD Ig-like domain LOS88_14695 IPR006299 Flagellar basal-body rod protein FlgC LOS88_14695 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LOS88_14695 IPR019776 Flagellar basal body rod protein, conserved site LOS88_14695 IPR001444 Flagellar basal body rod protein, N-terminal LOS88_14700 IPR006300 Flagellar basal-body rod protein FlgB LOS88_14700 IPR001444 Flagellar basal body rod protein, N-terminal LOS88_14700 IPR019776 Flagellar basal body rod protein, conserved site LOS88_14705 IPR000780 MCP methyltransferase, CheR-type LOS88_14705 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LOS88_14705 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily LOS88_14705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_14705 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LOS88_14710 IPR001789 Signal transduction response regulator, receiver domain LOS88_14710 IPR002545 CheW-like domain LOS88_14710 IPR036061 CheW-like domain superfamily LOS88_14710 IPR024181 Chemotaxis response regulator CheV LOS88_14710 IPR011006 CheY-like superfamily LOS88_14715 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal LOS88_14715 IPR013974 SAF domain LOS88_14715 IPR039246 Flagellar protein FlgA LOS88_14730 IPR000979 Phosphodiesterase MJ0936/Vps29 LOS88_14730 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type LOS88_14730 IPR020935 Phosphodiesterase YfcE, conserved site LOS88_14730 IPR041802 YfcE-like, metallophosphatase domain LOS88_14730 IPR029052 Metallo-dependent phosphatase-like LOS88_14735 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_14735 IPR039424 Solute-binding protein family 5 LOS88_14735 IPR000914 Solute-binding protein family 5 domain LOS88_14735 IPR023765 Solute-binding protein family 5, conserved site LOS88_14745 IPR036986 RNA-binding S4 domain superfamily LOS88_14745 IPR002942 RNA-binding S4 domain LOS88_14745 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LOS88_14745 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LOS88_14745 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_14745 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_14745 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LOS88_14750 IPR006675 HDIG domain LOS88_14750 IPR037522 HD-GYP domain LOS88_14750 IPR006674 HD domain LOS88_14750 IPR003607 HD/PDEase domain LOS88_14760 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial LOS88_14760 IPR018225 Transaldolase, active site LOS88_14760 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase LOS88_14760 IPR023001 Fructose-6-phosphate aldolase LOS88_14760 IPR013785 Aldolase-type TIM barrel LOS88_14760 IPR001585 Transaldolase/Fructose-6-phosphate aldolase LOS88_14765 IPR013785 Aldolase-type TIM barrel LOS88_14765 IPR007197 Radical SAM LOS88_14765 IPR001989 Radical-activating enzyme, conserved site LOS88_14765 IPR034465 Pyruvate formate-lyase activase LOS88_14765 IPR012839 Organic radical enzyme activase LOS88_14765 IPR034457 Organic radical-activating enzymes LOS88_14770 IPR004184 Pyruvate formate lyase domain LOS88_14770 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family LOS88_14770 IPR001150 Glycine radical domain LOS88_14770 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LOS88_14775 IPR001034 DeoR-type HTH domain LOS88_14775 IPR037171 NagB/RpiA transferase-like LOS88_14775 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LOS88_14775 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_14775 IPR014036 DeoR C-terminal sensor domain LOS88_14775 IPR036390 Winged helix DNA-binding domain superfamily LOS88_14780 IPR000914 Solute-binding protein family 5 domain LOS88_14780 IPR039424 Solute-binding protein family 5 LOS88_14780 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_14805 IPR002059 Cold-shock protein, DNA-binding LOS88_14805 IPR019844 Cold-shock (CSD) domain LOS88_14805 IPR012156 Cold shock, CspA LOS88_14805 IPR011129 Cold shock domain LOS88_14805 IPR012340 Nucleic acid-binding, OB-fold LOS88_14810 IPR004167 Peripheral subunit-binding domain LOS88_14810 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LOS88_14810 IPR000089 Biotin/lipoyl attachment LOS88_14810 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LOS88_14810 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LOS88_14810 IPR036625 E3-binding domain superfamily LOS88_14810 IPR011053 Single hybrid motif LOS88_14815 IPR029061 Thiamin diphosphate-binding fold LOS88_14815 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LOS88_14815 IPR005475 Transketolase-like, pyrimidine-binding domain LOS88_14815 IPR033248 Transketolase, C-terminal domain LOS88_14820 IPR029061 Thiamin diphosphate-binding fold LOS88_14820 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha LOS88_14820 IPR001017 Dehydrogenase, E1 component LOS88_14830 IPR036736 ACP-like superfamily LOS88_14830 IPR020845 AMP-binding, conserved site LOS88_14830 IPR000873 AMP-dependent synthetase/ligase LOS88_14830 IPR042099 AMP-dependent synthetase-like superfamily LOS88_14830 IPR029058 Alpha/Beta hydrolase fold LOS88_14830 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LOS88_14830 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LOS88_14830 IPR020802 Polyketide synthase, thioesterase domain LOS88_14830 IPR009081 Phosphopantetheine binding ACP domain LOS88_14830 IPR006162 Phosphopantetheine attachment site LOS88_14830 IPR001031 Thioesterase LOS88_14830 IPR001242 Condensation domain LOS88_14830 IPR010071 Amino acid adenylation domain LOS88_14835 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase LOS88_14835 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_14835 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_14835 IPR036291 NAD(P)-binding domain superfamily LOS88_14840 IPR009081 Phosphopantetheine binding ACP domain LOS88_14840 IPR036380 Isochorismatase-like superfamily LOS88_14840 IPR000868 Isochorismatase-like LOS88_14840 IPR016291 Isochorismatase LOS88_14840 IPR036736 ACP-like superfamily LOS88_14845 IPR011963 2,3-dihydroxybenzoate-AMP ligase LOS88_14845 IPR042099 AMP-dependent synthetase-like superfamily LOS88_14845 IPR000873 AMP-dependent synthetase/ligase LOS88_14845 IPR020845 AMP-binding, conserved site LOS88_14845 IPR025110 AMP-binding enzyme, C-terminal domain LOS88_14850 IPR015890 Chorismate-utilising enzyme, C-terminal LOS88_14850 IPR005801 ADC synthase LOS88_14850 IPR004561 Isochorismate synthase LOS88_14855 IPR039426 Vitamin B12 transporter BtuB-like LOS88_14855 IPR012910 TonB-dependent receptor, plug domain LOS88_14855 IPR037066 TonB-dependent receptor, plug domain superfamily LOS88_14855 IPR000531 TonB-dependent receptor-like, beta-barrel LOS88_14855 IPR010916 TonB box, conserved site LOS88_14855 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LOS88_14855 IPR010917 TonB-dependent receptor, conserved site LOS88_14860 IPR013785 Aldolase-type TIM barrel LOS88_14860 IPR006219 DHAP synthase, class 1 LOS88_14860 IPR006218 DAHP synthetase I/KDSA LOS88_14865 IPR000843 LacI-type HTH domain LOS88_14865 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_14865 IPR028082 Periplasmic binding protein-like I LOS88_14870 IPR023346 Lysozyme-like domain superfamily LOS88_14870 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily LOS88_14870 IPR012289 Lytic transglycosylase, superhelical linker LOS88_14870 IPR008939 Lytic transglycosylase, superhelical U-shaped LOS88_14870 IPR000189 Prokaryotic transglycosylase, active site LOS88_14870 IPR008258 Transglycosylase SLT domain 1 LOS88_14875 IPR035919 EAL domain superfamily LOS88_14875 IPR001633 EAL domain LOS88_14875 IPR005330 MHYT domain LOS88_14875 IPR029787 Nucleotide cyclase LOS88_14875 IPR000160 GGDEF domain LOS88_14880 IPR036567 Ribosome hibernation promotion factor-like LOS88_14880 IPR003489 Ribosome hibernation promoting factor/RaiA LOS88_14900 IPR007452 Translocation and assembly module TamB LOS88_14905 IPR000184 Bacterial surface antigen (D15) LOS88_14905 IPR010827 POTRA domain, BamA/TamA-like LOS88_14905 IPR034746 POTRA domain LOS88_14905 IPR035243 TamA, POTRA domain 1 LOS88_14905 IPR039910 Surface antigen D15-like LOS88_14915 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LOS88_14915 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LOS88_14925 IPR029032 AhpD-like LOS88_14925 IPR003779 Carboxymuconolactone decarboxylase-like LOS88_14930 IPR023753 FAD/NAD(P)-binding domain LOS88_14930 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_14930 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOS88_14930 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LOS88_14930 IPR021179 Mercury(II) reductase LOS88_14930 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LOS88_14930 IPR006121 Heavy metal-associated domain, HMA LOS88_14930 IPR017969 Heavy-metal-associated, conserved site LOS88_14930 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LOS88_14930 IPR036163 Heavy metal-associated domain superfamily LOS88_14935 IPR006059 Bacterial extracellular solute-binding protein LOS88_14935 IPR027020 Protein ynjB LOS88_14945 IPR003593 AAA+ ATPase domain LOS88_14945 IPR003439 ABC transporter-like LOS88_14945 IPR017871 ABC transporter, conserved site LOS88_14945 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_14950 IPR000462 CDP-alcohol phosphatidyltransferase LOS88_14955 IPR023346 Lysozyme-like domain superfamily LOS88_14955 IPR011757 Lytic transglycosylase MltB LOS88_14955 IPR031304 Transglycosylase SLT domain 2 LOS88_14960 IPR036390 Winged helix DNA-binding domain superfamily LOS88_14960 IPR011991 ArsR-like helix-turn-helix domain LOS88_14960 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_14960 IPR000835 MarR-type HTH domain LOS88_14970 IPR005852 Phosphoglucomutase, alpha-D-glucose specific LOS88_14970 IPR016066 Alpha-D-phosphohexomutase, conserved site LOS88_14970 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LOS88_14970 IPR005843 Alpha-D-phosphohexomutase, C-terminal LOS88_14970 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LOS88_14970 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LOS88_14970 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LOS88_14970 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LOS88_14975 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal LOS88_14975 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain LOS88_14975 IPR005621 Negative modulator of initiation of replication SeqA LOS88_14975 IPR010985 Ribbon-helix-helix LOS88_14975 IPR013321 Arc-type ribbon-helix-helix LOS88_14975 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily LOS88_14980 IPR029058 Alpha/Beta hydrolase fold LOS88_14980 IPR000073 Alpha/beta hydrolase fold-1 LOS88_14990 IPR002145 Ribbon-helix-helix protein, CopG LOS88_14990 IPR010985 Ribbon-helix-helix LOS88_14995 IPR008254 Flavodoxin/nitric oxide synthase LOS88_14995 IPR001226 Flavodoxin, conserved site LOS88_14995 IPR010086 Flavodoxin, long chain LOS88_14995 IPR029039 Flavoprotein-like superfamily LOS88_15005 IPR002481 Ferric-uptake regulator LOS88_15005 IPR036390 Winged helix DNA-binding domain superfamily LOS88_15005 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_15010 IPR004514 Glutamine-tRNA synthetase LOS88_15010 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_15010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_15010 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily LOS88_15010 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal LOS88_15010 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily LOS88_15010 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LOS88_15010 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LOS88_15010 IPR022861 Glutamine-tRNA ligase, bacterial LOS88_15010 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain LOS88_15015 IPR017853 Glycoside hydrolase superfamily LOS88_15015 IPR013783 Immunoglobulin-like fold LOS88_15015 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal LOS88_15015 IPR014756 Immunoglobulin E-set LOS88_15015 IPR015883 Glycoside hydrolase family 20, catalytic domain LOS88_15015 IPR029018 Beta-hexosaminidase-like, domain 2 LOS88_15015 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain LOS88_15015 IPR012291 CBM2, carbohydrate-binding domain superfamily LOS88_15015 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily LOS88_15015 IPR025705 Beta-hexosaminidase LOS88_15015 IPR004867 Chitobiase C-terminal domain LOS88_15020 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component LOS88_15020 IPR001996 Phosphotransferase system, IIB component, type 1 LOS88_15020 IPR003352 Phosphotransferase system, EIIC LOS88_15020 IPR013013 Phosphotransferase system, EIIC component, type 1 LOS88_15020 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LOS88_15020 IPR036878 Glucose permease domain IIB LOS88_15020 IPR011055 Duplicated hybrid motif LOS88_15020 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LOS88_15025 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase LOS88_15025 IPR004547 Glucosamine-6-phosphate isomerase LOS88_15025 IPR018321 Glucosamine-6-phosphate isomerase, conserved site LOS88_15025 IPR037171 NagB/RpiA transferase-like LOS88_15030 IPR032466 Metal-dependent hydrolase LOS88_15030 IPR006680 Amidohydrolase-related LOS88_15030 IPR003764 N-acetylglucosamine-6-phosphate deacetylase LOS88_15030 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_15035 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_15035 IPR036390 Winged helix DNA-binding domain superfamily LOS88_15035 IPR000835 MarR-type HTH domain LOS88_15035 IPR000600 ROK family LOS88_15040 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_15040 IPR012549 Phosphoethanolamine transferase, N-terminal LOS88_15040 IPR040423 Phosphoethanolamine transferase LOS88_15040 IPR000917 Sulfatase, N-terminal LOS88_15045 IPR006674 HD domain LOS88_15045 IPR029787 Nucleotide cyclase LOS88_15045 IPR037522 HD-GYP domain LOS88_15045 IPR000160 GGDEF domain LOS88_15045 IPR003607 HD/PDEase domain LOS88_15050 IPR003018 GAF domain LOS88_15050 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LOS88_15050 IPR010559 Signal transduction histidine kinase, internal region LOS88_15050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_15055 IPR011006 CheY-like superfamily LOS88_15055 IPR007492 LytTR DNA-binding domain LOS88_15055 IPR001789 Signal transduction response regulator, receiver domain LOS88_15060 IPR003706 CstA, N-terminal domain LOS88_15065 IPR011223 Uncharacterised conserved protein UCP028770 LOS88_15070 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_15075 IPR001650 Helicase, C-terminal LOS88_15075 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15075 IPR011332 Zinc-binding ribosomal protein LOS88_15075 IPR006935 Helicase/UvrB, N-terminal LOS88_15075 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_15080 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C LOS88_15080 IPR012338 Beta-lactamase/transpeptidase-like LOS88_15085 IPR002109 Glutaredoxin LOS88_15085 IPR014025 Glutaredoxin subgroup LOS88_15085 IPR011902 Glutaredoxin, GrxA LOS88_15085 IPR036249 Thioredoxin-like superfamily LOS88_15090 IPR022958 Uncharacterised protein family UPF0294 LOS88_15090 IPR005135 Endonuclease/exonuclease/phosphatase LOS88_15090 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LOS88_15100 IPR006683 Thioesterase domain LOS88_15100 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain LOS88_15100 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase LOS88_15100 IPR029069 HotDog domain superfamily LOS88_15105 IPR001509 NAD-dependent epimerase/dehydratase LOS88_15105 IPR036291 NAD(P)-binding domain superfamily LOS88_15115 IPR036397 Ribonuclease H superfamily LOS88_15115 IPR012337 Ribonuclease H-like superfamily LOS88_15115 IPR001584 Integrase, catalytic core LOS88_15115 IPR009057 Homeobox-like domain superfamily LOS88_15115 IPR001598 Transposase, IS30, conserved site LOS88_15125 IPR009057 Homeobox-like domain superfamily LOS88_15125 IPR012337 Ribonuclease H-like superfamily LOS88_15125 IPR036397 Ribonuclease H superfamily LOS88_15125 IPR001598 Transposase, IS30, conserved site LOS88_15125 IPR001584 Integrase, catalytic core LOS88_15135 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LOS88_15135 IPR029061 Thiamin diphosphate-binding fold LOS88_15135 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain LOS88_15135 IPR011895 Pyruvate-flavodoxin oxidoreductase LOS88_15135 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal LOS88_15135 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain LOS88_15135 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain LOS88_15135 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LOS88_15135 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II LOS88_15135 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_15135 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_15135 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily LOS88_15140 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily LOS88_15140 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain LOS88_15140 IPR009051 Alpha-helical ferredoxin LOS88_15140 IPR023753 FAD/NAD(P)-binding domain LOS88_15140 IPR028261 Dihydroprymidine dehydrogenase domain II LOS88_15140 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_15155 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_15155 IPR005302 Molybdenum cofactor sulfurase, C-terminal LOS88_15155 IPR011037 Pyruvate kinase-like, insert domain superfamily LOS88_15155 IPR012675 Beta-grasp domain superfamily LOS88_15155 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LOS88_15155 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_15155 IPR005303 MOSC, N-terminal beta barrel LOS88_15155 IPR005303 MOSC, N-terminal beta barrel LOS88_15155 IPR011037 Pyruvate kinase-like, insert domain superfamily LOS88_15155 IPR012675 Beta-grasp domain superfamily LOS88_15155 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LOS88_15155 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_15155 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_15155 IPR005302 Molybdenum cofactor sulfurase, C-terminal LOS88_15160 IPR004090 Chemotaxis methyl-accepting receptor LOS88_15160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_15160 IPR001610 PAC motif LOS88_15160 IPR000014 PAS domain LOS88_15160 IPR000700 PAS-associated, C-terminal LOS88_15160 IPR035965 PAS domain superfamily LOS88_15160 IPR013655 PAS fold-3 LOS88_15165 IPR022919 Peptidase M48, protease HtpX, putative LOS88_15165 IPR001915 Peptidase M48 LOS88_15170 IPR004472 Dethiobiotin synthase BioD LOS88_15170 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15175 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LOS88_15175 IPR013216 Methyltransferase type 11 LOS88_15175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_15180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_15180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_15180 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria LOS88_15180 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type LOS88_15180 IPR004839 Aminotransferase, class I/classII LOS88_15180 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_15180 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LOS88_15185 IPR010722 Biotin and thiamin synthesis-associated domain LOS88_15185 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB LOS88_15185 IPR024177 Biotin synthase LOS88_15185 IPR006638 Elp3/MiaB/NifB LOS88_15185 IPR007197 Radical SAM LOS88_15185 IPR013785 Aldolase-type TIM barrel LOS88_15190 IPR005814 Aminotransferase class-III LOS88_15190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_15190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_15190 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_15190 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA LOS88_15205 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LOS88_15205 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_15205 IPR004522 Asparagine-tRNA ligase LOS88_15205 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb LOS88_15205 IPR012340 Nucleic acid-binding, OB-fold LOS88_15205 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LOS88_15215 IPR004668 Anaerobic c4-dicarboxylate membrane transporter LOS88_15225 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_15225 IPR011650 Peptidase M20, dimerisation domain LOS88_15225 IPR002933 Peptidase M20 LOS88_15225 IPR017439 Amidohydrolase LOS88_15225 IPR033845 p-Aminobenzoyl-glutamate hydrolase subunit A LOS88_15230 IPR018385 C4-dicarboxylate anaerobic carrier-like LOS88_15230 IPR004669 C4-dicarboxylate anaerobic carrier LOS88_15240 IPR006504 Transcriptional regulator Spx/MgsR LOS88_15240 IPR036249 Thioredoxin-like superfamily LOS88_15240 IPR006660 Arsenate reductase-like LOS88_15245 IPR011650 Peptidase M20, dimerisation domain LOS88_15245 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LOS88_15245 IPR002933 Peptidase M20 LOS88_15245 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_15245 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria LOS88_15250 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LOS88_15250 IPR003709 Peptidase M15B LOS88_15260 IPR038770 Sodium/solute symporter superfamily LOS88_15260 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_15260 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_15260 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LOS88_15260 IPR006153 Cation/H+ exchanger LOS88_15260 IPR005170 Transporter-associated domain LOS88_15260 IPR030151 K(+)/H(+) antiporter NhaP LOS88_15260 IPR023729 K(+)/H(+) antiporter NhaP2 LOS88_15260 IPR006037 Regulator of K+ conductance, C-terminal LOS88_15275 IPR001123 Amino acid exporter protein, LeuE-type LOS88_15280 IPR000727 Target SNARE coiled-coil homology domain LOS88_15280 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_15280 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_15280 IPR003660 HAMP domain LOS88_15280 IPR004090 Chemotaxis methyl-accepting receptor LOS88_15285 IPR011088 Bacteriophage phiNM3, A0EWY4 LOS88_15300 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site LOS88_15300 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LOS88_15300 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LOS88_15300 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA LOS88_15300 IPR036452 Ribonucleoside hydrolase-like LOS88_15305 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_15305 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_15305 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LOS88_15310 IPR010058 Uridine phosphorylase LOS88_15310 IPR035994 Nucleoside phosphorylase superfamily LOS88_15310 IPR000845 Nucleoside phosphorylase domain LOS88_15310 IPR018016 Nucleoside phosphorylase, conserved site LOS88_15380 IPR018774 Bacteriophage Mu, GpT LOS88_15385 IPR012106 Protease, Mu phage/prophage I type LOS88_15405 IPR009279 Protein of unknown function DUF935 LOS88_15410 IPR012036 Bacteriophage Mu, Gp28 LOS88_15410 IPR004921 Terminase large subunit, T4likevirus-type LOS88_15415 IPR021874 Bacteriophage Mu, Gp27 LOS88_15420 IPR013668 Ribonuclease R winged-helix domain LOS88_15420 IPR036390 Winged helix DNA-binding domain superfamily LOS88_15545 IPR026592 Outer membrane protein assembly factor BamE LOS88_15545 IPR037873 BamE-like LOS88_15545 IPR007450 Lipoprotein SmpA/OmlA LOS88_15550 IPR016040 NAD(P)-binding domain LOS88_15550 IPR036291 NAD(P)-binding domain superfamily LOS88_15550 IPR000534 Semialdehyde dehydrogenase, NAD-binding LOS88_15560 IPR023741 Lipoate-protein ligase A LOS88_15560 IPR019491 Lipoate protein ligase, C-terminal LOS88_15560 IPR004562 Lipoyltransferase/lipoate-protein ligase LOS88_15560 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LOS88_15565 IPR000160 GGDEF domain LOS88_15565 IPR035919 EAL domain superfamily LOS88_15565 IPR001633 EAL domain LOS88_15565 IPR005330 MHYT domain LOS88_15565 IPR029787 Nucleotide cyclase LOS88_15570 IPR017911 ABC transporter, macrolide export, ATP-binding domain LOS88_15570 IPR017871 ABC transporter, conserved site LOS88_15570 IPR003439 ABC transporter-like LOS88_15570 IPR003838 ABC transporter permease protein domain LOS88_15570 IPR003593 AAA+ ATPase domain LOS88_15570 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15570 IPR025857 MacB-like periplasmic core domain LOS88_15575 IPR003439 ABC transporter-like LOS88_15575 IPR003593 AAA+ ATPase domain LOS88_15575 IPR017871 ABC transporter, conserved site LOS88_15575 IPR017911 ABC transporter, macrolide export, ATP-binding domain LOS88_15575 IPR025857 MacB-like periplasmic core domain LOS88_15575 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15575 IPR003838 ABC transporter permease protein domain LOS88_15580 IPR003838 ABC transporter permease protein domain LOS88_15580 IPR017911 ABC transporter, macrolide export, ATP-binding domain LOS88_15580 IPR003439 ABC transporter-like LOS88_15580 IPR017871 ABC transporter, conserved site LOS88_15580 IPR025857 MacB-like periplasmic core domain LOS88_15580 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15580 IPR003593 AAA+ ATPase domain LOS88_15585 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_15590 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_15590 IPR001036 Acriflavin resistance protein LOS88_15590 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LOS88_15605 IPR007272 Sulphur transport domain LOS88_15625 IPR003416 MgtC/SapB/SrpB/YhiD family LOS88_15630 IPR025997 Periplasmic binding protein LOS88_15630 IPR028082 Periplasmic binding protein-like I LOS88_15630 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_15630 IPR000843 LacI-type HTH domain LOS88_15630 IPR012781 D-fructose-responsive transcription factor LOS88_15635 IPR013189 Glycosyl hydrolase family 32, C-terminal LOS88_15635 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily LOS88_15635 IPR006232 Sucrose-6-phosphate hydrolase LOS88_15635 IPR018053 Glycoside hydrolase, family 32, active site LOS88_15635 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily LOS88_15635 IPR013148 Glycosyl hydrolase family 32, N-terminal LOS88_15635 IPR001362 Glycoside hydrolase, family 32 LOS88_15640 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LOS88_15640 IPR003352 Phosphotransferase system, EIIC LOS88_15640 IPR013013 Phosphotransferase system, EIIC component, type 1 LOS88_15640 IPR001996 Phosphotransferase system, IIB component, type 1 LOS88_15640 IPR010973 Phosphotransferase system, sucrose-specific IIBC component LOS88_15640 IPR036878 Glucose permease domain IIB LOS88_15640 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LOS88_15645 IPR002139 Ribokinase/fructokinase LOS88_15645 IPR029056 Ribokinase-like LOS88_15645 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LOS88_15645 IPR011611 Carbohydrate kinase PfkB LOS88_15650 IPR021570 LamB-type porin N-terminal domain LOS88_15650 IPR003192 Porin, LamB-type LOS88_15650 IPR036998 Porin, LamB-type superfamily LOS88_15655 IPR008971 HSP40/DnaJ peptide-binding LOS88_15655 IPR001305 Heat shock protein DnaJ, cysteine-rich domain LOS88_15655 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily LOS88_15655 IPR001623 DnaJ domain LOS88_15655 IPR012724 Chaperone DnaJ LOS88_15655 IPR018253 DnaJ domain, conserved site LOS88_15655 IPR036869 Chaperone J-domain superfamily LOS88_15655 IPR002939 Chaperone DnaJ, C-terminal LOS88_15660 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily LOS88_15660 IPR012725 Chaperone DnaK LOS88_15660 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily LOS88_15660 IPR013126 Heat shock protein 70 family LOS88_15660 IPR018181 Heat shock protein 70, conserved site LOS88_15665 IPR000740 GrpE nucleotide exchange factor LOS88_15665 IPR013805 GrpE nucleotide exchange factor, coiled-coil LOS88_15665 IPR009012 GrpE nucleotide exchange factor, head LOS88_15670 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal LOS88_15670 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal LOS88_15670 IPR002504 NAD kinase LOS88_15670 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily LOS88_15675 IPR004604 DNA recombination/repair protein RecN LOS88_15675 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15675 IPR003395 RecF/RecN/SMC, N-terminal LOS88_15680 IPR001667 DDH domain LOS88_15680 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable LOS88_15680 IPR004097 DHHA2 domain LOS88_15680 IPR038222 DHHA2 domain superfamily LOS88_15680 IPR038763 DHH phosphoesterase superfamily LOS88_15685 IPR006143 RND efflux pump, membrane fusion protein LOS88_15685 IPR030190 Macrolide export protein MacA LOS88_15685 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_15690 IPR017871 ABC transporter, conserved site LOS88_15690 IPR003593 AAA+ ATPase domain LOS88_15690 IPR003838 ABC transporter permease protein domain LOS88_15690 IPR003439 ABC transporter-like LOS88_15690 IPR017911 ABC transporter, macrolide export, ATP-binding domain LOS88_15690 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15690 IPR025857 MacB-like periplasmic core domain LOS88_15695 IPR010131 RND efflux system, outer membrane lipoprotein, NodT LOS88_15695 IPR003423 Outer membrane efflux protein LOS88_15700 IPR012337 Ribonuclease H-like superfamily LOS88_15700 IPR001598 Transposase, IS30, conserved site LOS88_15700 IPR009057 Homeobox-like domain superfamily LOS88_15700 IPR001584 Integrase, catalytic core LOS88_15700 IPR036397 Ribonuclease H superfamily LOS88_15705 IPR002559 Transposase, IS4-like LOS88_15705 IPR032806 H repeat-associated protein, N-terminal LOS88_15710 IPR012337 Ribonuclease H-like superfamily LOS88_15710 IPR038717 Tc1-like transposase, DDE domain LOS88_15710 IPR009057 Homeobox-like domain superfamily LOS88_15710 IPR025959 Winged helix-turn helix domain LOS88_15720 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LOS88_15720 IPR027444 Histone-like protein H-NS, C-terminal domain LOS88_15720 IPR027454 Histone-like protein H-NS, N-terminal LOS88_15720 IPR001801 Histone-like protein H-NS LOS88_15725 IPR003593 AAA+ ATPase domain LOS88_15725 IPR001270 ClpA/B family LOS88_15725 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_15725 IPR002611 IstB-like ATP-binding protein LOS88_15725 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15750 IPR002559 Transposase, IS4-like LOS88_15750 IPR032806 H repeat-associated protein, N-terminal LOS88_15770 IPR003362 Bacterial sugar transferase LOS88_15770 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LOS88_15780 IPR001296 Glycosyl transferase, family 1 LOS88_15780 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LOS88_15780 IPR011875 Alpha-maltose-1-phosphate synthase LOS88_15785 IPR001296 Glycosyl transferase, family 1 LOS88_15785 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LOS88_15790 IPR001173 Glycosyltransferase 2-like LOS88_15790 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_15830 IPR012337 Ribonuclease H-like superfamily LOS88_15830 IPR036397 Ribonuclease H superfamily LOS88_15830 IPR025948 HTH-like domain LOS88_15830 IPR001584 Integrase, catalytic core LOS88_15845 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain LOS88_15845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_15845 IPR036291 NAD(P)-binding domain superfamily LOS88_15850 IPR000715 Glycosyl transferase, family 4 LOS88_15850 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site LOS88_15855 IPR001509 NAD-dependent epimerase/dehydratase LOS88_15855 IPR036291 NAD(P)-binding domain superfamily LOS88_15875 IPR007739 Rhamnan synthesis F LOS88_15875 IPR032719 Glycosyltransferase WbsX LOS88_15885 IPR017871 ABC transporter, conserved site LOS88_15885 IPR003439 ABC transporter-like LOS88_15885 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_15885 IPR003593 AAA+ ATPase domain LOS88_15890 IPR013525 ABC-2 type transporter LOS88_15890 IPR000412 ABC-2 transporter LOS88_15895 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related LOS88_15895 IPR014710 RmlC-like jelly roll fold LOS88_15895 IPR011051 RmlC-like cupin domain superfamily LOS88_15900 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form LOS88_15900 IPR005835 Nucleotidyl transferase domain LOS88_15900 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_15905 IPR036291 NAD(P)-binding domain superfamily LOS88_15905 IPR005913 dTDP-4-dehydrorhamnose reductase family LOS88_15905 IPR029903 RmlD-like substrate binding domain LOS88_15910 IPR036291 NAD(P)-binding domain superfamily LOS88_15910 IPR016040 NAD(P)-binding domain LOS88_15910 IPR005888 dTDP-glucose 4,6-dehydratase LOS88_15915 IPR001036 Acriflavin resistance protein LOS88_15915 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LOS88_15915 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_15920 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_15920 IPR006143 RND efflux pump, membrane fusion protein LOS88_15925 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LOS88_15925 IPR009057 Homeobox-like domain superfamily LOS88_15925 IPR001647 DNA-binding HTH domain, TetR-type LOS88_15925 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LOS88_15925 IPR013572 Transcription regulator MAATS, C-terminal LOS88_15940 IPR013324 RNA polymerase sigma factor, region 3/4-like LOS88_15940 IPR002852 Uncharacterised protein family UPF0251 LOS88_15940 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_15955 IPR037522 HD-GYP domain LOS88_15955 IPR003607 HD/PDEase domain LOS88_15955 IPR001789 Signal transduction response regulator, receiver domain LOS88_15955 IPR011006 CheY-like superfamily LOS88_15960 IPR007197 Radical SAM LOS88_15960 IPR006638 Elp3/MiaB/NifB LOS88_15960 IPR005839 Methylthiotransferase LOS88_15960 IPR020612 Methylthiotransferase, conserved site LOS88_15960 IPR013848 Methylthiotransferase, N-terminal LOS88_15960 IPR038135 Methylthiotransferase, N-terminal domain superfamily LOS88_15960 IPR002792 TRAM domain LOS88_15960 IPR023404 Radical SAM, alpha/beta horseshoe LOS88_15960 IPR005840 Ribosomal protein S12 methylthiotransferase RimO LOS88_15960 IPR041582 RimO, TRAM domain LOS88_15975 IPR035994 Nucleoside phosphorylase superfamily LOS88_15975 IPR000845 Nucleoside phosphorylase domain LOS88_15975 IPR004402 Purine nucleoside phosphorylase DeoD-type LOS88_16000 IPR002177 DNA-binding protein Dps LOS88_16000 IPR023188 DNA-binding protein Dps, conserved site LOS88_16000 IPR012347 Ferritin-like LOS88_16000 IPR009078 Ferritin-like superfamily LOS88_16000 IPR008331 Ferritin/DPS protein domain LOS88_16025 IPR009057 Homeobox-like domain superfamily LOS88_16025 IPR001584 Integrase, catalytic core LOS88_16025 IPR012337 Ribonuclease H-like superfamily LOS88_16025 IPR036397 Ribonuclease H superfamily LOS88_16025 IPR001598 Transposase, IS30, conserved site LOS88_16030 IPR006327 Phosphotransferase system, fructose IIC component LOS88_16030 IPR013014 Phosphotransferase system, EIIC component, type 2 LOS88_16030 IPR003352 Phosphotransferase system, EIIC LOS88_16030 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LOS88_16030 IPR003353 Phosphotransferase system, fructose-specific IIB subunit LOS88_16030 IPR036095 PTS system IIB component-like superfamily LOS88_16030 IPR002178 PTS EIIA type-2 domain LOS88_16030 IPR016152 Phosphotransferase/anion transporter LOS88_16030 IPR013011 Phosphotransferase system, EIIB component, type 2 LOS88_16030 IPR004715 Phosphotransferase system, IIA component fructose subfamily LOS88_16035 IPR021159 Glycerate/sugar phosphate transporter, conserved site LOS88_16035 IPR020846 Major facilitator superfamily domain LOS88_16035 IPR000849 Sugar phosphate transporter LOS88_16035 IPR011701 Major facilitator superfamily LOS88_16035 IPR036259 MFS transporter superfamily LOS88_16040 IPR036095 PTS system IIB component-like superfamily LOS88_16040 IPR013011 Phosphotransferase system, EIIB component, type 2 LOS88_16040 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LOS88_16040 IPR003353 Phosphotransferase system, fructose-specific IIB subunit LOS88_16050 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LOS88_16050 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_16050 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_16050 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LOS88_16050 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LOS88_16055 IPR020084 NUDIX hydrolase, conserved site LOS88_16055 IPR020476 NUDIX hydrolase LOS88_16055 IPR033713 Phosphatase NudJ LOS88_16055 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_16055 IPR000086 NUDIX hydrolase domain LOS88_16060 IPR004506 tRNA-specific 2-thiouridylase LOS88_16060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_16060 IPR023382 Adenine nucleotide alpha hydrolase-like domains LOS88_16065 IPR035932 HflD-like superfamily LOS88_16065 IPR007451 High frequency lysogenization protein HflD LOS88_16070 IPR024083 Fumarase/histidase, N-terminal LOS88_16070 IPR000362 Fumarate lyase family LOS88_16070 IPR022761 Fumarate lyase, N-terminal LOS88_16070 IPR004769 Adenylosuccinate lyase LOS88_16070 IPR013539 Adenylosuccinate lyase PurB, C-terminal LOS88_16070 IPR020557 Fumarate lyase, conserved site LOS88_16070 IPR008948 L-Aspartase-like LOS88_16075 IPR003347 JmjC domain LOS88_16075 IPR039994 JmjC domain-containing LOS88_16095 IPR005955 Glutathione S-transferases, class Zeta LOS88_16095 IPR010987 Glutathione S-transferase, C-terminal-like LOS88_16095 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LOS88_16095 IPR040079 Glutathione Transferase family LOS88_16095 IPR004045 Glutathione S-transferase, N-terminal LOS88_16095 IPR036249 Thioredoxin-like superfamily LOS88_16095 IPR034333 Glutathione S-transferases, class Zeta , N-terminal LOS88_16095 IPR034330 Glutathione S-transferases, class Zeta , C-terminal LOS88_16100 IPR000659 Pyridoxamine 5'-phosphate oxidase LOS88_16100 IPR012349 FMN-binding split barrel LOS88_16100 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal LOS88_16100 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative LOS88_16100 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site LOS88_16125 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type LOS88_16125 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site LOS88_16125 IPR035926 NusB-like superfamily LOS88_16125 IPR006027 NusB/RsmB/TIM44 LOS88_16125 IPR023267 RNA (C5-cytosine) methyltransferase LOS88_16125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_16125 IPR004573 rRNA small subunit methyltransferase B LOS88_16130 IPR019897 RidA, conserved site LOS88_16130 IPR035959 RutC-like superfamily LOS88_16130 IPR006175 YjgF/YER057c/UK114 family LOS88_16130 IPR006056 RidA family LOS88_16135 IPR005949 Formate acetyltransferase LOS88_16135 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LOS88_16135 IPR001150 Glycine radical domain LOS88_16135 IPR004184 Pyruvate formate lyase domain LOS88_16140 IPR023865 Aliphatic acid kinase, short-chain, conserved site LOS88_16140 IPR024917 Propionate kinase LOS88_16140 IPR000890 Aliphatic acid kinase, short-chain LOS88_16140 IPR004372 Acetate/propionate kinase LOS88_16145 IPR018227 Amino acid/polyamine transporter 2 LOS88_16145 IPR004694 Hydroxy amino acid transporter LOS88_16145 IPR023726 Threonine/serine transporter TdcC LOS88_16150 IPR005789 Threonine dehydratase, catabolic LOS88_16150 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LOS88_16150 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LOS88_16150 IPR001926 Pyridoxal-phosphate dependent enzyme LOS88_16155 IPR002109 Glutaredoxin LOS88_16155 IPR033658 Glutaredoxin, PICOT-like LOS88_16155 IPR014434 Monothiol glutaredoxin LOS88_16155 IPR036249 Thioredoxin-like superfamily LOS88_16155 IPR004480 Monothiol glutaredoxin-related LOS88_16160 IPR019831 Manganese/iron superoxide dismutase, N-terminal LOS88_16160 IPR019833 Manganese/iron superoxide dismutase, binding site LOS88_16160 IPR019832 Manganese/iron superoxide dismutase, C-terminal LOS88_16160 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily LOS88_16160 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily LOS88_16160 IPR001189 Manganese/iron superoxide dismutase LOS88_16165 IPR007428 MlaA lipoprotein LOS88_16175 IPR019734 Tetratricopeptide repeat LOS88_16175 IPR005616 CcmH/CycL/Ccl2/NrfF family LOS88_16175 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily LOS88_16175 IPR013026 Tetratricopeptide repeat-containing domain LOS88_16175 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_16180 IPR036249 Thioredoxin-like superfamily LOS88_16180 IPR017937 Thioredoxin, conserved site LOS88_16180 IPR013766 Thioredoxin domain LOS88_16180 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE LOS88_16180 IPR013740 Redoxin LOS88_16185 IPR003567 Cytochrome c-type biogenesis protein LOS88_16185 IPR003568 Cytochrome c-type biogenesis protein CcmF LOS88_16185 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LOS88_16185 IPR002541 Cytochrome c assembly protein LOS88_16190 IPR036127 CcmE-like superfamily LOS88_16190 IPR004329 CcmE/CycJ protein LOS88_16195 IPR007078 Haem exporter protein D (CcmD) LOS88_16200 IPR003557 Cytochrome c-type biogenesis protein CcmC LOS88_16200 IPR002541 Cytochrome c assembly protein LOS88_16205 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LOS88_16205 IPR003544 Cytochrome c-type biogenesis protein CcmB LOS88_16210 IPR017871 ABC transporter, conserved site LOS88_16210 IPR005895 ABC transporter, haem export, CcmA LOS88_16210 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16210 IPR003439 ABC transporter-like LOS88_16210 IPR003593 AAA+ ATPase domain LOS88_16220 IPR036061 CheW-like domain superfamily LOS88_16220 IPR039315 Chemotaxis protein CheW LOS88_16220 IPR002545 CheW-like domain LOS88_16230 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16230 IPR025669 AAA domain LOS88_16235 IPR025713 Motility protein B, N-terminal domain LOS88_16235 IPR036737 OmpA-like domain superfamily LOS88_16235 IPR006665 OmpA-like domain LOS88_16240 IPR002898 MotA/TolQ/ExbB proton channel LOS88_16240 IPR000540 Flagellar motor protein MotA, conserved site LOS88_16245 IPR035909 Methylesterase CheB, C-terminal LOS88_16245 IPR011006 CheY-like superfamily LOS88_16245 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase LOS88_16245 IPR001789 Signal transduction response regulator, receiver domain LOS88_16245 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type LOS88_16250 IPR002545 CheW-like domain LOS88_16250 IPR004105 Histidine kinase CheA-like, homodimeric domain LOS88_16250 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily LOS88_16250 IPR036061 CheW-like domain superfamily LOS88_16250 IPR011006 CheY-like superfamily LOS88_16250 IPR036641 HPT domain superfamily LOS88_16250 IPR005467 Histidine kinase domain LOS88_16250 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_16250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_16250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_16250 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_16250 IPR001789 Signal transduction response regulator, receiver domain LOS88_16250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_16255 IPR007439 Chemotaxis phosphatase, CheZ LOS88_16260 IPR001789 Signal transduction response regulator, receiver domain LOS88_16260 IPR011006 CheY-like superfamily LOS88_16265 IPR000943 RNA polymerase sigma-70 LOS88_16265 IPR013324 RNA polymerase sigma factor, region 3/4-like LOS88_16265 IPR007627 RNA polymerase sigma-70 region 2 LOS88_16265 IPR028617 RNA polymerase sigma factor FliA LOS88_16265 IPR007630 RNA polymerase sigma-70 region 4 LOS88_16265 IPR013325 RNA polymerase sigma factor, region 2 LOS88_16265 IPR014284 RNA polymerase sigma-70 like domain LOS88_16265 IPR012845 RNA polymerase sigma factor, FliA/WhiG LOS88_16265 IPR007624 RNA polymerase sigma-70 region 3 LOS88_16270 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16270 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 LOS88_16270 IPR025501 ATP binding protein MinD LOS88_16275 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LOS88_16275 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16275 IPR003593 AAA+ ATPase domain LOS88_16275 IPR020006 Flagellar biosynthesis protein FlhF LOS88_16280 IPR025505 FHIPEP conserved site LOS88_16280 IPR042194 FHIPEP, domain 1 LOS88_16280 IPR006301 Flagellar biosynthesis protein FlhA LOS88_16280 IPR001712 Type III secretion system FHIPEP LOS88_16280 IPR042196 FHIPEP, domain 4 LOS88_16280 IPR042193 FHIPEP, domain 3 LOS88_16285 IPR006135 Type III secretion system substrate exporter LOS88_16285 IPR029025 Type III secretion system substrate exporter, C-terminal LOS88_16285 IPR006136 Flagellar biosynthetic protein FlhB LOS88_16290 IPR006303 Flagellar biosynthesis protein FliR LOS88_16290 IPR002010 Type III secretion system inner membrane R protein LOS88_16295 IPR002191 Bacterial export protein family 3 LOS88_16295 IPR006305 Flagellar biosynthesis protein FliQ LOS88_16300 IPR005837 Flagellar transport protein FliP LOS88_16300 IPR005838 Type III secretion system inner membrane P protein LOS88_16305 IPR022781 Flagellar biosynthesis protein, FliO LOS88_16310 IPR012826 Flagellar motor switch FliN LOS88_16310 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb LOS88_16310 IPR036429 SpoA-like superfamily LOS88_16310 IPR001543 Surface presentation of antigen (SpoA) LOS88_16315 IPR036429 SpoA-like superfamily LOS88_16315 IPR001543 Surface presentation of antigen (SpoA) LOS88_16315 IPR001689 Flagellar motor switch protein FliM LOS88_16315 IPR028976 CheC-like superfamily LOS88_16335 IPR020005 Flagellar export ATPase FliI, clade 1 LOS88_16335 IPR032463 ATPase, type III secretion system, FliI LOS88_16335 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LOS88_16335 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16335 IPR040627 T3SS EscN ATPase, C-terminal LOS88_16335 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LOS88_16335 IPR003593 AAA+ ATPase domain LOS88_16335 IPR005714 ATPase, type III secretion system, FliI/YscN LOS88_16345 IPR000090 Flagellar motor switch protein FliG LOS88_16345 IPR023087 Flagellar motor switch protein FliG, C-terminal LOS88_16345 IPR011002 Flagellar motor switch protein FliG, alpha-helical LOS88_16345 IPR028263 Flagellar motor switch protein FliG, N-terminal domain LOS88_16345 IPR032779 Flagellar motor switch protein FliG, middle domain LOS88_16350 IPR013556 Flagellar M-ring C-terminal LOS88_16350 IPR000067 Flagellar M-ring protein FliF LOS88_16350 IPR006182 Secretory protein YscJ/FliF LOS88_16355 IPR001624 Flagellar hook-basal body complex protein FliE LOS88_16375 IPR001697 Pyruvate kinase LOS88_16375 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_16375 IPR040442 Pyruvate kinase-like domain superfamily LOS88_16375 IPR011037 Pyruvate kinase-like, insert domain superfamily LOS88_16375 IPR018209 Pyruvate kinase, active site LOS88_16375 IPR015793 Pyruvate kinase, barrel LOS88_16375 IPR015795 Pyruvate kinase, C-terminal LOS88_16375 IPR036918 Pyruvate kinase, C-terminal domain superfamily LOS88_16375 IPR015806 Pyruvate kinase, insert domain superfamily LOS88_16380 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_16380 IPR001347 Sugar isomerase (SIS) LOS88_16380 IPR035472 RpiR-like, SIS domain LOS88_16380 IPR000281 Helix-turn-helix protein RpiR LOS88_16380 IPR009057 Homeobox-like domain superfamily LOS88_16385 IPR003836 Glucokinase LOS88_16410 IPR003660 HAMP domain LOS88_16410 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_16410 IPR004090 Chemotaxis methyl-accepting receptor LOS88_16415 IPR001320 Ionotropic glutamate receptor LOS88_16415 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LOS88_16415 IPR018313 Solute-binding protein family 3, conserved site LOS88_16415 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_16420 IPR006042 Xanthine/uracil permease LOS88_16420 IPR029935 Uracil permease LOS88_16420 IPR006043 Xanthine/uracil/vitamin C permease LOS88_16430 IPR032635 Surface antigen domain LOS88_16430 IPR008816 Glycine zipper 2TM domain LOS88_16430 IPR016364 Surface antigen, Rickettsia type LOS88_16435 IPR036291 NAD(P)-binding domain superfamily LOS88_16435 IPR015884 Malic enzyme, conserved site LOS88_16435 IPR012301 Malic enzyme, N-terminal domain LOS88_16435 IPR037062 Malic enzyme, N-terminal domain superfamily LOS88_16435 IPR001891 Malic oxidoreductase LOS88_16435 IPR012302 Malic enzyme, NAD-binding LOS88_16435 IPR023667 NAD-dependent malic enzyme, proteobacteria LOS88_16455 IPR000813 7Fe ferredoxin LOS88_16455 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_16455 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_16460 IPR006656 Molybdopterin oxidoreductase LOS88_16460 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_16460 IPR009010 Aspartate decarboxylase-like domain superfamily LOS88_16460 IPR041924 Formate dehydrogenase H, N-terminal LOS88_16460 IPR006478 Formate dehydrogenase, alpha subunit LOS88_16460 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_16460 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_16460 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LOS88_16460 IPR006657 Molybdopterin dinucleotide-binding domain LOS88_16460 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding LOS88_16460 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_16460 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LOS88_16460 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding LOS88_16460 IPR006656 Molybdopterin oxidoreductase LOS88_16460 IPR006657 Molybdopterin dinucleotide-binding domain LOS88_16460 IPR006478 Formate dehydrogenase, alpha subunit LOS88_16460 IPR041924 Formate dehydrogenase H, N-terminal LOS88_16460 IPR009010 Aspartate decarboxylase-like domain superfamily LOS88_16460 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_16460 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_16460 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_16460 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_16495 IPR003786 Sulfur carrier protein FdhD LOS88_16495 IPR016193 Cytidine deaminase-like LOS88_16505 IPR003660 HAMP domain LOS88_16505 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_16505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_16505 IPR005467 Histidine kinase domain LOS88_16505 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_16505 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_16505 IPR000014 PAS domain LOS88_16505 IPR000700 PAS-associated, C-terminal LOS88_16505 IPR035965 PAS domain superfamily LOS88_16505 IPR013767 PAS fold LOS88_16505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_16510 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_16510 IPR025944 Sigma-54 interaction domain, conserved site LOS88_16510 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LOS88_16510 IPR001789 Signal transduction response regulator, receiver domain LOS88_16510 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_16510 IPR002197 DNA binding HTH domain, Fis-type LOS88_16510 IPR009057 Homeobox-like domain superfamily LOS88_16510 IPR011006 CheY-like superfamily LOS88_16510 IPR003593 AAA+ ATPase domain LOS88_16510 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16515 IPR024370 PBP domain LOS88_16520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_16520 IPR035906 MetI-like superfamily LOS88_16525 IPR017871 ABC transporter, conserved site LOS88_16525 IPR003593 AAA+ ATPase domain LOS88_16525 IPR030921 LPS export ABC transporter, ATP-binding protein LptB LOS88_16525 IPR003439 ABC transporter-like LOS88_16525 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16530 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_16530 IPR013482 Molybdenum cofactor guanylyltransferase LOS88_16530 IPR025877 MobA-like NTP transferase LOS88_16535 IPR036135 MoeA, N-terminal and linker domain superfamily LOS88_16535 IPR001453 MoaB/Mog domain LOS88_16535 IPR036688 MoeA, C-terminal, domain IV superfamily LOS88_16535 IPR038987 Molybdopterin biosynthesis protein MoeA-like LOS88_16535 IPR008284 Molybdenum cofactor biosynthesis, conserved site LOS88_16535 IPR005110 MoeA, N-terminal and linker domain LOS88_16535 IPR036425 MoaB/Mog-like domain superfamily LOS88_16535 IPR005111 MoeA, C-terminal, domain IV LOS88_16540 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein LOS88_16545 IPR037522 HD-GYP domain LOS88_16545 IPR003607 HD/PDEase domain LOS88_16555 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_16555 IPR004090 Chemotaxis methyl-accepting receptor LOS88_16555 IPR001610 PAC motif LOS88_16555 IPR000700 PAS-associated, C-terminal LOS88_16555 IPR035965 PAS domain superfamily LOS88_16555 IPR013655 PAS fold-3 LOS88_16555 IPR000014 PAS domain LOS88_16575 IPR036237 Xylose isomerase-like superfamily LOS88_16575 IPR007801 Uncharacterised protein family UPF0276 LOS88_16585 IPR019663 Uncharacterised protein YbfA LOS88_16605 IPR001789 Signal transduction response regulator, receiver domain LOS88_16605 IPR029151 Periplasmic sensor-like domain superfamily LOS88_16605 IPR011006 CheY-like superfamily LOS88_16605 IPR015387 LuxQ, periplasmic LOS88_16605 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_16605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_16605 IPR035965 PAS domain superfamily LOS88_16605 IPR005467 Histidine kinase domain LOS88_16605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_16605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_16605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_16610 IPR023765 Solute-binding protein family 5, conserved site LOS88_16610 IPR039424 Solute-binding protein family 5 LOS88_16610 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_16610 IPR000914 Solute-binding protein family 5 domain LOS88_16615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_16615 IPR035906 MetI-like superfamily LOS88_16620 IPR035906 MetI-like superfamily LOS88_16620 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LOS88_16620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_16625 IPR017871 ABC transporter, conserved site LOS88_16625 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16625 IPR003593 AAA+ ATPase domain LOS88_16625 IPR003439 ABC transporter-like LOS88_16625 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LOS88_16630 IPR003593 AAA+ ATPase domain LOS88_16630 IPR017871 ABC transporter, conserved site LOS88_16630 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_16630 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LOS88_16630 IPR003439 ABC transporter-like LOS88_16640 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type LOS88_16645 IPR015883 Glycoside hydrolase family 20, catalytic domain LOS88_16645 IPR017853 Glycoside hydrolase superfamily LOS88_16645 IPR029018 Beta-hexosaminidase-like, domain 2 LOS88_16645 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal LOS88_16645 IPR025705 Beta-hexosaminidase LOS88_16650 IPR013655 PAS fold-3 LOS88_16650 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_16650 IPR000014 PAS domain LOS88_16650 IPR035965 PAS domain superfamily LOS88_16650 IPR004090 Chemotaxis methyl-accepting receptor LOS88_16650 IPR001610 PAC motif LOS88_16650 IPR003660 HAMP domain LOS88_16665 IPR034149 DNA topoisomerase 1, TOPRIM domain LOS88_16665 IPR013497 DNA topoisomerase, type IA, central LOS88_16665 IPR028612 DNA topoisomerase I, type IA LOS88_16665 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type LOS88_16665 IPR005733 DNA topoisomerase I, bacterial-type LOS88_16665 IPR013498 DNA topoisomerase, type IA, zn finger LOS88_16665 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LOS88_16665 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LOS88_16665 IPR000380 DNA topoisomerase, type IA LOS88_16665 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LOS88_16665 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LOS88_16665 IPR006171 TOPRIM domain LOS88_16665 IPR023406 DNA topoisomerase, type IA, active site LOS88_16665 IPR003601 DNA topoisomerase, type IA, domain 2 LOS88_16665 IPR023405 DNA topoisomerase, type IA, core domain LOS88_16670 IPR037031 Succinylarginine dihydrolase superfamily LOS88_16670 IPR007079 Succinylarginine dihydrolase LOS88_16695 IPR011006 CheY-like superfamily LOS88_16695 IPR001789 Signal transduction response regulator, receiver domain LOS88_16695 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_16695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_16695 IPR005467 Histidine kinase domain LOS88_16695 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_16695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_16695 IPR019247 Histidine kinase BarA, N-terminal LOS88_16695 IPR036641 HPT domain superfamily LOS88_16695 IPR003660 HAMP domain LOS88_16695 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_16695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_16700 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_16700 IPR000792 Transcription regulator LuxR, C-terminal LOS88_16700 IPR001789 Signal transduction response regulator, receiver domain LOS88_16700 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_16700 IPR030864 Transcriptional regulatory protein RcsB LOS88_16700 IPR011006 CheY-like superfamily LOS88_16705 IPR009057 Homeobox-like domain superfamily LOS88_16705 IPR012337 Ribonuclease H-like superfamily LOS88_16705 IPR036397 Ribonuclease H superfamily LOS88_16705 IPR001598 Transposase, IS30, conserved site LOS88_16705 IPR001584 Integrase, catalytic core LOS88_16710 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_16710 IPR029016 GAF-like domain superfamily LOS88_16710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_16710 IPR003018 GAF domain LOS88_16710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_16710 IPR016132 Phytochrome chromophore attachment domain LOS88_16710 IPR001294 Phytochrome LOS88_16710 IPR013654 PAS fold-2 LOS88_16710 IPR013515 Phytochrome, central region LOS88_16710 IPR035965 PAS domain superfamily LOS88_16710 IPR005467 Histidine kinase domain LOS88_16710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_16730 IPR025668 Transposase DDE domain LOS88_16735 IPR000160 GGDEF domain LOS88_16735 IPR007894 MASE2 LOS88_16735 IPR029787 Nucleotide cyclase LOS88_16740 IPR032806 H repeat-associated protein, N-terminal LOS88_16740 IPR002559 Transposase, IS4-like LOS88_16745 IPR012337 Ribonuclease H-like superfamily LOS88_16745 IPR002559 Transposase, IS4-like LOS88_16755 IPR002559 Transposase, IS4-like LOS88_16755 IPR032806 H repeat-associated protein, N-terminal LOS88_16760 IPR012337 Ribonuclease H-like superfamily LOS88_16760 IPR002559 Transposase, IS4-like LOS88_16780 IPR022951 Uncharacterised protein family UPF0309 LOS88_16780 IPR035472 RpiR-like, SIS domain LOS88_16780 IPR001347 Sugar isomerase (SIS) LOS88_16785 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component LOS88_16790 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit LOS88_16795 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup LOS88_16795 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily LOS88_16795 IPR004720 Phosphotransferase system, sorbose subfamily IIB component LOS88_16800 IPR000771 Fructose-bisphosphate aldolase, class-II LOS88_16800 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY LOS88_16800 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY LOS88_16800 IPR013785 Aldolase-type TIM barrel LOS88_16805 IPR032466 Metal-dependent hydrolase LOS88_16805 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_16805 IPR006680 Amidohydrolase-related LOS88_16805 IPR003764 N-acetylglucosamine-6-phosphate deacetylase LOS88_16810 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily LOS88_16810 IPR004701 Phosphotransferase system, mannose-type IIA component LOS88_16810 IPR033887 PTS system mannose/sorbose specific IIA subunit LOS88_16815 IPR014180 Sugar isomerase, AgaS LOS88_16815 IPR035464 AgaS, SIS domain LOS88_16815 IPR001347 Sugar isomerase (SIS) LOS88_16815 IPR035466 GlmS/AgaS, SIS domain 1 LOS88_16820 IPR013785 Aldolase-type TIM barrel LOS88_16820 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like LOS88_16820 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ LOS88_16825 IPR001034 DeoR-type HTH domain LOS88_16825 IPR037171 NagB/RpiA transferase-like LOS88_16825 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LOS88_16825 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_16825 IPR036390 Winged helix DNA-binding domain superfamily LOS88_16825 IPR014036 DeoR C-terminal sensor domain LOS88_16835 IPR020846 Major facilitator superfamily domain LOS88_16835 IPR005829 Sugar transporter, conserved site LOS88_16835 IPR005828 Major facilitator, sugar transporter-like LOS88_16835 IPR036259 MFS transporter superfamily LOS88_16835 IPR003663 Sugar/inositol transporter LOS88_16840 IPR033396 Domain of unknown function DUF5107 LOS88_16840 IPR013026 Tetratricopeptide repeat-containing domain LOS88_16840 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_16840 IPR019734 Tetratricopeptide repeat LOS88_16845 IPR000600 ROK family LOS88_16845 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_16845 IPR036390 Winged helix DNA-binding domain superfamily LOS88_16855 IPR016195 Polymerase/histidinol phosphatase-like LOS88_16855 IPR003141 Polymerase/histidinol phosphatase, N-terminal LOS88_16855 IPR023710 Probable phosphatase YcdX LOS88_16860 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LOS88_16860 IPR001647 DNA-binding HTH domain, TetR-type LOS88_16860 IPR009057 Homeobox-like domain superfamily LOS88_16865 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LOS88_16865 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type LOS88_16865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LOS88_16865 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LOS88_16865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LOS88_16865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LOS88_16865 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LOS88_16870 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_16870 IPR001036 Acriflavin resistance protein LOS88_16870 IPR023931 Multidrug resistance protein MdtC LOS88_16880 IPR002176 Crossover junction endodeoxyribonuclease RuvC LOS88_16880 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site LOS88_16880 IPR036397 Ribonuclease H superfamily LOS88_16880 IPR012337 Ribonuclease H-like superfamily LOS88_16885 IPR012842 Type III secretion system HrpE/YscL LOS88_16885 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE LOS88_16890 IPR009510 Type III secretion system, secretion protein K LOS88_16895 IPR006182 Secretory protein YscJ/FliF LOS88_16895 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ LOS88_16900 IPR012670 Type III secretion system, YscI/HrpB LOS88_16910 IPR013348 Type III secretion system YscG LOS88_16910 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_16915 IPR011841 Type III secretion system, needle protein LOS88_16915 IPR021123 Type III secretion, needle-protein-like LOS88_16915 IPR037203 Type III secretion, needle-protein-like superfamily LOS88_16925 IPR032030 YscD, cytoplasmic domain LOS88_16925 IPR000253 Forkhead-associated (FHA) domain LOS88_16925 IPR012843 Type III secretion system YscD/HrpQ LOS88_16925 IPR032034 Yop protein translocation protein D, periplasmic domain LOS88_16925 IPR008984 SMAD/FHA domain superfamily LOS88_16930 IPR038591 NolW-like superfamily LOS88_16930 IPR005644 NolW-like LOS88_16930 IPR004846 Type II/III secretion system LOS88_16930 IPR004845 Type II secretion system GspD, conserved site LOS88_16930 IPR003522 Type III secretion system outer membrane pore YscC/HrcC LOS88_16935 IPR013353 Type III secretion system chaperone YscB LOS88_16935 IPR010261 Tir chaperone protein (CesT) family LOS88_16940 IPR031835 Antiactivator protein ExsD LOS88_16950 IPR032806 H repeat-associated protein, N-terminal LOS88_16950 IPR002559 Transposase, IS4-like LOS88_16955 IPR020449 Transcription regulator HTH, AraC- type LOS88_16955 IPR009057 Homeobox-like domain superfamily LOS88_16955 IPR018062 HTH domain AraC-type, conserved site LOS88_16955 IPR018060 DNA binding HTH domain, AraC-type LOS88_16955 IPR014710 RmlC-like jelly roll fold LOS88_16965 IPR039366 YscW/ExsB LOS88_16975 IPR010261 Tir chaperone protein (CesT) family LOS88_16980 IPR008898 YopD-like LOS88_16985 IPR006972 Secretion system effector C, SseC-like LOS88_16990 IPR013026 Tetratricopeptide repeat-containing domain LOS88_16990 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_16990 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup LOS88_16990 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD LOS88_16990 IPR011716 Tetratricopeptide TPR-3 LOS88_16995 IPR005413 Low calcium response V antigen LOS88_16995 IPR036139 Virulence-associated V antigen superfamily LOS88_17000 IPR009863 Type III secretion protein, LcrG LOS88_17005 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 LOS88_17005 IPR013405 Type III secretion system regulator, LcrR LOS88_17010 IPR001712 Type III secretion system FHIPEP LOS88_17010 IPR006302 Type III secretion protein HrcV LOS88_17010 IPR042196 FHIPEP, domain 4 LOS88_17010 IPR042193 FHIPEP, domain 3 LOS88_17010 IPR042194 FHIPEP, domain 1 LOS88_17010 IPR025505 FHIPEP conserved site LOS88_17020 IPR012672 Type III secretion system YscX LOS88_17025 IPR012673 Type III secretion system chaperone SycN LOS88_17030 IPR015144 Type III secretion system effector delivery regulator TyeA LOS88_17030 IPR013351 Type III secretion system effector delivery regulator TyeA-related LOS88_17030 IPR038347 TyeA superfamily LOS88_17035 IPR010812 Hypersensitivity response secretion-like, HrpJ LOS88_17035 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC LOS88_17040 IPR040627 T3SS EscN ATPase, C-terminal LOS88_17040 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17040 IPR013380 ATPase, type III secretion system, H+-transporting LOS88_17040 IPR005714 ATPase, type III secretion system, FliI/YscN LOS88_17040 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LOS88_17040 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LOS88_17040 IPR003593 AAA+ ATPase domain LOS88_17040 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LOS88_17050 IPR021136 Flagellar hook-length control protein-like, C-terminal LOS88_17050 IPR013354 Type III secretion system needle length determinant, C-terminal domain LOS88_17055 IPR001543 Surface presentation of antigen (SpoA) LOS88_17055 IPR036429 SpoA-like superfamily LOS88_17055 IPR003283 Type III secretion system outer membrane, SpaO LOS88_17055 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO LOS88_17060 IPR005838 Type III secretion system inner membrane P protein LOS88_17060 IPR005773 Yop virulence translocation protein R LOS88_17065 IPR002191 Bacterial export protein family 3 LOS88_17065 IPR006306 Type III secretion protein HrpO LOS88_17070 IPR006304 Type III secretion protein SpaR/YscT LOS88_17070 IPR002010 Type III secretion system inner membrane R protein LOS88_17075 IPR006307 Type III exporter system, secretion apparatus protein BsaZ LOS88_17075 IPR006135 Type III secretion system substrate exporter LOS88_17075 IPR029025 Type III secretion system substrate exporter, C-terminal LOS88_17080 IPR003540 ADP ribosyltransferase LOS88_17100 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LOS88_17100 IPR013785 Aldolase-type TIM barrel LOS88_17100 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_17100 IPR023753 FAD/NAD(P)-binding domain LOS88_17105 IPR000551 MerR-type HTH domain LOS88_17105 IPR011789 Cu(I)-responsive transcriptional regulator LOS88_17105 IPR009061 Putative DNA-binding domain superfamily LOS88_17120 IPR001584 Integrase, catalytic core LOS88_17120 IPR017894 HTH domain, IS21 transposase-type LOS88_17120 IPR036397 Ribonuclease H superfamily LOS88_17120 IPR012337 Ribonuclease H-like superfamily LOS88_17120 IPR006120 Resolvase, HTH domain LOS88_17125 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17125 IPR002611 IstB-like ATP-binding protein LOS88_17125 IPR001270 ClpA/B family LOS88_17125 IPR003593 AAA+ ATPase domain LOS88_17135 IPR001926 Pyridoxal-phosphate dependent enzyme LOS88_17135 IPR004450 Threonine synthase-like LOS88_17135 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LOS88_17135 IPR029144 Threonine synthase, N-terminal LOS88_17135 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LOS88_17135 IPR037158 Threonine synthase, N-terminal domain superfamily LOS88_17140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_17140 IPR013750 GHMP kinase, C-terminal domain LOS88_17140 IPR036554 GHMP kinase, C-terminal domain superfamily LOS88_17140 IPR006204 GHMP kinase N-terminal domain LOS88_17140 IPR006203 GHMP kinase, ATP-binding, conserved site LOS88_17140 IPR000870 Homoserine kinase LOS88_17140 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_17145 IPR001341 Aspartate kinase LOS88_17145 IPR002912 ACT domain LOS88_17145 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain LOS88_17145 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_17145 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding LOS88_17145 IPR018042 Aspartate kinase, conserved site LOS88_17145 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I LOS88_17145 IPR027795 CASTOR, ACT domain LOS88_17145 IPR001342 Homoserine dehydrogenase, catalytic LOS88_17145 IPR019811 Homoserine dehydrogenase, conserved site LOS88_17145 IPR036291 NAD(P)-binding domain superfamily LOS88_17145 IPR036393 Acetylglutamate kinase-like superfamily LOS88_17150 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LOS88_17150 IPR001537 tRNA/rRNA methyltransferase, SpoU type LOS88_17150 IPR029028 Alpha/beta knot methyltransferases LOS88_17150 IPR004384 RNA methyltransferase TrmJ/LasT LOS88_17155 IPR010452 Isocitrate dehydrogenase kinasephosphatase LOS88_17160 IPR003703 Acyl-CoA thioesterase LOS88_17160 IPR029069 HotDog domain superfamily LOS88_17170 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_17170 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_17170 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LOS88_17170 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LOS88_17170 IPR002942 RNA-binding S4 domain LOS88_17170 IPR036986 RNA-binding S4 domain superfamily LOS88_17175 IPR036390 Winged helix DNA-binding domain superfamily LOS88_17175 IPR005234 Chromosome segregation/condensation protein ScpB LOS88_17175 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_17180 IPR003768 Segregation and condensation protein A LOS88_17185 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LOS88_17185 IPR006070 YrdC-like domain LOS88_17190 IPR004013 PHP domain LOS88_17190 IPR003141 Polymerase/histidinol phosphatase, N-terminal LOS88_17190 IPR016195 Polymerase/histidinol phosphatase-like LOS88_17195 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial LOS88_17195 IPR015890 Chorismate-utilising enzyme, C-terminal LOS88_17195 IPR019999 Anthranilate synthase component I-like LOS88_17195 IPR005801 ADC synthase LOS88_17195 IPR006805 Anthranilate synthase component I, N-terminal LOS88_17200 IPR005940 Anthranilate phosphoribosyl transferase LOS88_17200 IPR029062 Class I glutamine amidotransferase-like LOS88_17200 IPR017926 Glutamine amidotransferase LOS88_17200 IPR000312 Glycosyl transferase, family 3 LOS88_17200 IPR017459 Glycosyl transferase family 3, N-terminal domain LOS88_17200 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LOS88_17200 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LOS88_17200 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain LOS88_17205 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LOS88_17205 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LOS88_17205 IPR017459 Glycosyl transferase family 3, N-terminal domain LOS88_17205 IPR000312 Glycosyl transferase, family 3 LOS88_17205 IPR005940 Anthranilate phosphoribosyl transferase LOS88_17210 IPR013785 Aldolase-type TIM barrel LOS88_17210 IPR013798 Indole-3-glycerol phosphate synthase LOS88_17210 IPR001468 Indole-3-glycerol phosphate synthase, conserved site LOS88_17210 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) LOS88_17210 IPR011060 Ribulose-phosphate binding barrel LOS88_17215 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LOS88_17215 IPR023026 Tryptophan synthase beta chain/beta chain-like LOS88_17215 IPR006654 Tryptophan synthase, beta chain LOS88_17215 IPR001926 Pyridoxal-phosphate dependent enzyme LOS88_17215 IPR006653 Tryptophan synthase, beta chain, conserved site LOS88_17220 IPR013785 Aldolase-type TIM barrel LOS88_17220 IPR011060 Ribulose-phosphate binding barrel LOS88_17220 IPR018204 Tryptophan synthase, alpha chain, active site LOS88_17220 IPR002028 Tryptophan synthase, alpha chain LOS88_17225 IPR036397 Ribonuclease H superfamily LOS88_17225 IPR009057 Homeobox-like domain superfamily LOS88_17225 IPR001584 Integrase, catalytic core LOS88_17225 IPR012337 Ribonuclease H-like superfamily LOS88_17225 IPR001598 Transposase, IS30, conserved site LOS88_17240 IPR007404 LexA-binding, inner membrane-associated putative hydrolase LOS88_17260 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_17260 IPR008276 Concentrative nucleoside transporter LOS88_17260 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LOS88_17260 IPR002668 Concentrative nucleoside transporter N-terminal domain LOS88_17260 IPR011657 Concentrative nucleoside transporter C-terminal domain LOS88_17265 IPR006659 Arsenate reductase LOS88_17265 IPR006660 Arsenate reductase-like LOS88_17265 IPR036249 Thioredoxin-like superfamily LOS88_17270 IPR004706 Arsenical-resistance protein Acr3 LOS88_17270 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 LOS88_17270 IPR038770 Sodium/solute symporter superfamily LOS88_17275 IPR003593 AAA+ ATPase domain LOS88_17275 IPR025723 Anion-transporting ATPase-like domain LOS88_17275 IPR027541 Arsenical pump-driving ATPase LOS88_17275 IPR016300 Arsenical pump ATPase, ArsA/GET3 LOS88_17275 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17280 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD LOS88_17280 IPR036249 Thioredoxin-like superfamily LOS88_17300 IPR010203 Regulator of ribonuclease activity A LOS88_17300 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LOS88_17300 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily LOS88_17310 IPR001789 Signal transduction response regulator, receiver domain LOS88_17310 IPR039420 Transcriptional regulatory protein WalR-like LOS88_17310 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_17310 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_17310 IPR011006 CheY-like superfamily LOS88_17310 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_17325 IPR039421 Type I protein exporter LOS88_17325 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD LOS88_17325 IPR017871 ABC transporter, conserved site LOS88_17325 IPR003439 ABC transporter-like LOS88_17325 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17325 IPR011527 ABC transporter type 1, transmembrane domain LOS88_17325 IPR003593 AAA+ ATPase domain LOS88_17325 IPR036640 ABC transporter type 1, transmembrane domain superfamily LOS88_17330 IPR003593 AAA+ ATPase domain LOS88_17330 IPR011527 ABC transporter type 1, transmembrane domain LOS88_17330 IPR036640 ABC transporter type 1, transmembrane domain superfamily LOS88_17330 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC LOS88_17330 IPR003439 ABC transporter-like LOS88_17330 IPR017871 ABC transporter, conserved site LOS88_17330 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17350 IPR040372 YaeB-like LOS88_17350 IPR036413 YaeB-like superfamily LOS88_17350 IPR023368 Uncharacterised protein family UPF0066, conserved site LOS88_17350 IPR036414 YaeB, N-terminal domain superfamily LOS88_17350 IPR023370 TrmO-like, N-terminal domain LOS88_17350 IPR041369 TrmO, C-terminal LOS88_17355 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase LOS88_17355 IPR016174 Di-haem cytochrome, transmembrane LOS88_17365 IPR011006 CheY-like superfamily LOS88_17365 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_17365 IPR001789 Signal transduction response regulator, receiver domain LOS88_17365 IPR039420 Transcriptional regulatory protein WalR-like LOS88_17365 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_17370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_17370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_17370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_17370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_17370 IPR005467 Histidine kinase domain LOS88_17370 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_17370 IPR003660 HAMP domain LOS88_17375 IPR005134 Uncharacterised protein family UPF0114 LOS88_17375 IPR020761 Uncharacterised protein family UPF0114, bacteria LOS88_17390 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_17390 IPR006076 FAD dependent oxidoreductase LOS88_17395 IPR001387 Cro/C1-type helix-turn-helix domain LOS88_17395 IPR013096 Cupin 2, conserved barrel LOS88_17395 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_17395 IPR014710 RmlC-like jelly roll fold LOS88_17395 IPR011051 RmlC-like cupin domain superfamily LOS88_17400 IPR010102 Succinate semialdehyde dehydrogenase LOS88_17400 IPR015590 Aldehyde dehydrogenase domain LOS88_17400 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LOS88_17400 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_17400 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_17400 IPR016160 Aldehyde dehydrogenase, cysteine active site LOS88_17400 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_17405 IPR004632 4-aminobutyrate aminotransferase, bacterial LOS88_17405 IPR005814 Aminotransferase class-III LOS88_17405 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_17405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_17405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_17410 IPR004841 Amino acid permease/ SLC12A domain LOS88_17420 IPR004841 Amino acid permease/ SLC12A domain LOS88_17425 IPR003841 Sodium-dependent phosphate transport protein LOS88_17425 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein LOS88_17430 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal LOS88_17430 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily LOS88_17430 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LOS88_17435 IPR000101 Gamma-glutamyltranspeptidase LOS88_17435 IPR029055 Nucleophile aminohydrolases, N-terminal LOS88_17440 IPR007476 Putative exonuclease, RdgC LOS88_17450 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LOS88_17450 IPR029052 Metallo-dependent phosphatase-like LOS88_17450 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain LOS88_17450 IPR004593 Nuclease SbcCD subunit D LOS88_17450 IPR026843 Nuclease SbcCD subunit D, C-terminal domain LOS88_17455 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17455 IPR038729 Rad50/SbcC-type AAA domain LOS88_17460 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B LOS88_17460 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type LOS88_17470 IPR001697 Pyruvate kinase LOS88_17470 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_17470 IPR040442 Pyruvate kinase-like domain superfamily LOS88_17470 IPR011037 Pyruvate kinase-like, insert domain superfamily LOS88_17470 IPR018209 Pyruvate kinase, active site LOS88_17470 IPR015793 Pyruvate kinase, barrel LOS88_17470 IPR015795 Pyruvate kinase, C-terminal LOS88_17470 IPR036918 Pyruvate kinase, C-terminal domain superfamily LOS88_17470 IPR015806 Pyruvate kinase, insert domain superfamily LOS88_17475 IPR024393 Mechanosensitive ion channel MscS, porin domain LOS88_17475 IPR025692 Mechanosensitive ion channel inner membrane domain 1 LOS88_17475 IPR023408 Mechanosensitive ion channel MscS domain superfamily LOS88_17475 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LOS88_17475 IPR011066 Mechanosensitive ion channel MscS, C-terminal LOS88_17475 IPR006685 Mechanosensitive ion channel MscS LOS88_17475 IPR010920 LSM domain superfamily LOS88_17475 IPR023298 P-type ATPase, transmembrane domain superfamily LOS88_17475 IPR006686 Mechanosensitive ion channel MscS, conserved site LOS88_17485 IPR024079 Metallopeptidase, catalytic domain superfamily LOS88_17485 IPR000718 Peptidase M13 LOS88_17485 IPR018497 Peptidase M13, C-terminal domain LOS88_17485 IPR042089 Peptidase M13, domain 2 LOS88_17485 IPR008753 Peptidase M13, N-terminal domain LOS88_17490 IPR029787 Nucleotide cyclase LOS88_17490 IPR000160 GGDEF domain LOS88_17495 IPR011055 Duplicated hybrid motif LOS88_17495 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LOS88_17500 IPR006318 Phosphotransferase system, enzyme I-like LOS88_17500 IPR000121 PEP-utilising enzyme, C-terminal LOS88_17500 IPR023151 PEP-utilising enzyme, conserved site LOS88_17500 IPR036637 Phosphohistidine domain superfamily LOS88_17500 IPR024692 Phosphotransferase system, enzyme I LOS88_17500 IPR008731 Phosphotransferase system, enzyme I N-terminal LOS88_17500 IPR036618 PtsI, HPr-binding domain superfamily LOS88_17500 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_17500 IPR040442 Pyruvate kinase-like domain superfamily LOS88_17500 IPR018274 PEP-utilising enzyme, active site LOS88_17500 IPR008279 PEP-utilising enzyme, mobile domain LOS88_17505 IPR000032 Phosphocarrier protein HPr-like LOS88_17505 IPR035895 HPr-like superfamily LOS88_17505 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LOS88_17505 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LOS88_17510 IPR005856 Cysteine synthase LOS88_17510 IPR005859 Cysteine synthase CysK LOS88_17510 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LOS88_17510 IPR001926 Pyridoxal-phosphate dependent enzyme LOS88_17510 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LOS88_17515 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17515 IPR037219 Peptidase M41-like LOS88_17515 IPR000642 Peptidase M41 LOS88_17515 IPR005936 Peptidase, FtsH LOS88_17515 IPR003960 ATPase, AAA-type, conserved site LOS88_17515 IPR003959 ATPase, AAA-type, core LOS88_17515 IPR041569 AAA ATPase, AAA+ lid domain LOS88_17515 IPR003593 AAA+ ATPase domain LOS88_17525 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LOS88_17525 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LOS88_17525 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LOS88_17525 IPR016039 Thiolase-like LOS88_17530 IPR003660 HAMP domain LOS88_17530 IPR003607 HD/PDEase domain LOS88_17530 IPR006674 HD domain LOS88_17530 IPR037522 HD-GYP domain LOS88_17535 IPR036366 PGBD superfamily LOS88_17535 IPR036365 PGBD-like superfamily LOS88_17535 IPR002477 Peptidoglycan binding-like LOS88_17535 IPR003593 AAA+ ATPase domain LOS88_17535 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17540 IPR032389 Type II secretion system protein B LOS88_17545 IPR036034 PDZ superfamily LOS88_17545 IPR001639 Type II secretion system protein C LOS88_17545 IPR024961 Type II secretion system protein C, N-terminal LOS88_17550 IPR001775 GspD/PilQ family LOS88_17550 IPR005644 NolW-like LOS88_17550 IPR038591 NolW-like superfamily LOS88_17550 IPR004846 Type II/III secretion system LOS88_17550 IPR013356 Type II secretion system GspD LOS88_17550 IPR004845 Type II secretion system GspD, conserved site LOS88_17555 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_17555 IPR003593 AAA+ ATPase domain LOS88_17555 IPR001482 Type II/IV secretion system protein LOS88_17555 IPR037257 General secretory system II, protein E, N-terminal superfamily LOS88_17555 IPR013369 Type II secretion system GspE LOS88_17555 IPR042181 Type II secretion system, protein E, N-terminal LOS88_17560 IPR018076 Type II secretion system F domain LOS88_17560 IPR001992 Type II secretion system conserved site LOS88_17560 IPR011850 General secretion pathway protein F LOS88_17560 IPR042094 Type II secretion system F domain superfamily LOS88_17560 IPR003004 GspF/PilC family LOS88_17565 IPR010054 General secretion pathway protein G LOS88_17565 IPR012902 Prokaryotic N-terminal methylation site LOS88_17565 IPR013545 Type II secretion system protein G LOS88_17565 IPR000983 Bacterial general secretion pathway protein G-type pilin LOS88_17570 IPR012902 Prokaryotic N-terminal methylation site LOS88_17570 IPR022346 General secretion pathway, GspH LOS88_17570 IPR002416 Type II secretion system protein H LOS88_17575 IPR012902 Prokaryotic N-terminal methylation site LOS88_17575 IPR003413 Type II secretion system protein I domain LOS88_17575 IPR010052 Type II secretion system protein I LOS88_17585 IPR005628 General secretion pathway protein K LOS88_17585 IPR038072 GspK, central domain superfamily LOS88_17590 IPR024230 GspL, cytoplasmic actin-ATPase-like domain LOS88_17590 IPR025691 GspL periplasmic domain LOS88_17590 IPR007812 Type II secretion system protein L LOS88_17595 IPR023229 Type II secretion system protein M, periplasmic domain superfamily LOS88_17595 IPR007690 Type II secretion system, protein M LOS88_17600 IPR000645 Type II secretion system protein N, conserved site LOS88_17600 IPR022792 Type II secretion system, protein N LOS88_17605 IPR036095 PTS system IIB component-like superfamily LOS88_17605 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LOS88_17605 IPR013012 Phosphotransferase system, EIIB component, type 3 LOS88_17610 IPR003352 Phosphotransferase system, EIIC LOS88_17610 IPR004501 Phosphotransferase system, EIIC component, type 3 LOS88_17610 IPR004796 Phosphotransferase system, cellobiose-type IIC component LOS88_17615 IPR017853 Glycoside hydrolase superfamily LOS88_17615 IPR001360 Glycoside hydrolase family 1 LOS88_17615 IPR018120 Glycoside hydrolase family 1, active site LOS88_17620 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit LOS88_17620 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily LOS88_17625 IPR013096 Cupin 2, conserved barrel LOS88_17625 IPR009057 Homeobox-like domain superfamily LOS88_17625 IPR018060 DNA binding HTH domain, AraC-type LOS88_17625 IPR018062 HTH domain AraC-type, conserved site LOS88_17625 IPR014710 RmlC-like jelly roll fold LOS88_17625 IPR011051 RmlC-like cupin domain superfamily LOS88_17625 IPR020449 Transcription regulator HTH, AraC- type LOS88_17630 IPR019802 Glycoside hydrolase, family 4, conserved site LOS88_17630 IPR001088 Glycoside hydrolase, family 4 LOS88_17630 IPR022616 Glycosyl hydrolase, family 4, C-terminal LOS88_17630 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LOS88_17630 IPR036291 NAD(P)-binding domain superfamily LOS88_17635 IPR006879 Carbohydrate deacetylase YdjC-like LOS88_17635 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LOS88_17635 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria LOS88_17645 IPR006213 Bax inhibitor 1, conserved site LOS88_17645 IPR006214 Bax inhibitor 1-related LOS88_17650 IPR010019 Integral membrane protein, YccS LOS88_17650 IPR010020 Integral membrane protein, YccS/YhfK LOS88_17650 IPR032692 Integral membrane protein YccS, N-terminal LOS88_17655 IPR042072 DsrC-like protein, C-terminal domain LOS88_17655 IPR025526 DsrC-like domain superfamily LOS88_17655 IPR007453 Sulphur transfer protein DsrC/TusE LOS88_17660 IPR036291 NAD(P)-binding domain superfamily LOS88_17660 IPR000683 Oxidoreductase, N-terminal LOS88_17665 IPR036390 Winged helix DNA-binding domain superfamily LOS88_17665 IPR005119 LysR, substrate-binding LOS88_17665 IPR037416 Nodulation protein D, PBP2 LOS88_17665 IPR000847 Transcription regulator HTH, LysR LOS88_17665 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_17715 IPR024560 Uncharacterised protein family UPF0313, C-terminal LOS88_17715 IPR007197 Radical SAM LOS88_17715 IPR013704 Uncharacterised protein family UPF0313, N-terminal LOS88_17715 IPR022946 Uncharacterised protein family UPF0313 LOS88_17715 IPR023404 Radical SAM, alpha/beta horseshoe LOS88_17715 IPR020612 Methylthiotransferase, conserved site LOS88_17715 IPR006638 Elp3/MiaB/NifB LOS88_17720 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LOS88_17720 IPR001036 Acriflavin resistance protein LOS88_17720 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LOS88_17725 IPR005694 Efflux pump membrane protein LOS88_17725 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_17725 IPR030196 Multidrug resistance protein MdtN LOS88_17730 IPR033424 Membrane-associated sensor domain LOS88_17730 IPR000160 GGDEF domain LOS88_17730 IPR029787 Nucleotide cyclase LOS88_17735 IPR002641 Patatin-like phospholipase domain LOS88_17735 IPR001423 Lysophospholipase patatin, conserved site LOS88_17735 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LOS88_17740 IPR002293 Amino acid/polyamine transporter I LOS88_17750 IPR002293 Amino acid/polyamine transporter I LOS88_17765 IPR036737 OmpA-like domain superfamily LOS88_17765 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LOS88_17765 IPR006665 OmpA-like domain LOS88_17765 IPR006690 Outer membrane protein, OmpA-like, conserved site LOS88_17765 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LOS88_17765 IPR006664 Outer membrane protein, bacterial LOS88_17765 IPR002368 Outer membrane protein, OmpA LOS88_17785 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LOS88_17785 IPR006664 Outer membrane protein, bacterial LOS88_17785 IPR002368 Outer membrane protein, OmpA LOS88_17785 IPR006665 OmpA-like domain LOS88_17785 IPR006690 Outer membrane protein, OmpA-like, conserved site LOS88_17785 IPR036737 OmpA-like domain superfamily LOS88_17785 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LOS88_17790 IPR036291 NAD(P)-binding domain superfamily LOS88_17790 IPR015884 Malic enzyme, conserved site LOS88_17790 IPR037062 Malic enzyme, N-terminal domain superfamily LOS88_17790 IPR012301 Malic enzyme, N-terminal domain LOS88_17790 IPR001891 Malic oxidoreductase LOS88_17790 IPR023667 NAD-dependent malic enzyme, proteobacteria LOS88_17790 IPR012302 Malic enzyme, NAD-binding LOS88_17795 IPR018060 DNA binding HTH domain, AraC-type LOS88_17795 IPR029062 Class I glutamine amidotransferase-like LOS88_17795 IPR020449 Transcription regulator HTH, AraC- type LOS88_17795 IPR009057 Homeobox-like domain superfamily LOS88_17795 IPR018062 HTH domain AraC-type, conserved site LOS88_17800 IPR002528 Multi antimicrobial extrusion protein LOS88_17805 IPR019633 Protein of unknown function DUF2498 LOS88_17805 IPR038191 YciN superfamily LOS88_17810 IPR000160 GGDEF domain LOS88_17810 IPR029787 Nucleotide cyclase LOS88_17815 IPR006042 Xanthine/uracil permease LOS88_17815 IPR006043 Xanthine/uracil/vitamin C permease LOS88_17820 IPR024897 Octanoyltransferase LipL LOS88_17820 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LOS88_17825 IPR001463 Sodium:alanine symporter LOS88_17830 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LOS88_17830 IPR002986 Diaminopimelate decarboxylase, LysA LOS88_17830 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal LOS88_17830 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LOS88_17830 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site LOS88_17830 IPR000183 Ornithine/DAP/Arg decarboxylase LOS88_17830 IPR029066 PLP-binding barrel LOS88_17835 IPR004837 Sodium/calcium exchanger membrane region LOS88_17835 IPR004481 Sodium/potassium/calcium exchanger LOS88_17840 IPR013766 Thioredoxin domain LOS88_17840 IPR036249 Thioredoxin-like superfamily LOS88_17840 IPR013740 Redoxin LOS88_17840 IPR037944 Peroxiredoxin-5-like LOS88_17850 IPR000086 NUDIX hydrolase domain LOS88_17850 IPR024195 NUDIX hydrolase, YfcD, predicted LOS88_17850 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_17865 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal LOS88_17865 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LOS88_17865 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily LOS88_17870 IPR005627 Copper homeostasis protein CutC LOS88_17870 IPR036822 Copper homeostasis (CutC) domain superfamily LOS88_17870 IPR023648 Copper homeostasis CutC domain LOS88_17875 IPR000600 ROK family LOS88_17875 IPR023505 N-acetyl-D-glucosamine kinase LOS88_17885 IPR001915 Peptidase M48 LOS88_17885 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_17885 IPR030873 Beta-barrel assembly-enhancing protease LOS88_17890 IPR024370 PBP domain LOS88_17890 IPR011862 Phosphate binding protein LOS88_17895 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR LOS88_17895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_17895 IPR021766 Phosphate regulon sensor protein PhoR LOS88_17895 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_17895 IPR035965 PAS domain superfamily LOS88_17895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_17895 IPR013767 PAS fold LOS88_17895 IPR005467 Histidine kinase domain LOS88_17895 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_17895 IPR000014 PAS domain LOS88_17895 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_17900 IPR011006 CheY-like superfamily LOS88_17900 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_17900 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB LOS88_17900 IPR001789 Signal transduction response regulator, receiver domain LOS88_17900 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_17900 IPR039420 Transcriptional regulatory protein WalR-like LOS88_17905 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LOS88_17905 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LOS88_17905 IPR037523 Vicinal oxygen chelate (VOC) domain LOS88_17910 IPR001789 Signal transduction response regulator, receiver domain LOS88_17910 IPR029787 Nucleotide cyclase LOS88_17910 IPR011006 CheY-like superfamily LOS88_17910 IPR000160 GGDEF domain LOS88_17920 IPR000620 EamA domain LOS88_17925 IPR011006 CheY-like superfamily LOS88_17925 IPR024187 Signal transduction response regulator, citrate/malate metabolism LOS88_17925 IPR001789 Signal transduction response regulator, receiver domain LOS88_17925 IPR028141 Transcriptional regulator LOS88_17930 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_17930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_17930 IPR005467 Histidine kinase domain LOS88_17930 IPR000014 PAS domain LOS88_17930 IPR035965 PAS domain superfamily LOS88_17930 IPR013767 PAS fold LOS88_17930 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_17930 IPR029151 Periplasmic sensor-like domain superfamily LOS88_17930 IPR033463 Single cache domain 3 LOS88_17930 IPR039506 SpoOB, alpha-helical domain LOS88_17930 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB LOS88_17935 IPR012301 Malic enzyme, N-terminal domain LOS88_17935 IPR023667 NAD-dependent malic enzyme, proteobacteria LOS88_17935 IPR036291 NAD(P)-binding domain superfamily LOS88_17935 IPR015884 Malic enzyme, conserved site LOS88_17935 IPR012302 Malic enzyme, NAD-binding LOS88_17935 IPR001891 Malic oxidoreductase LOS88_17935 IPR037062 Malic enzyme, N-terminal domain superfamily LOS88_17945 IPR036397 Ribonuclease H superfamily LOS88_17945 IPR001598 Transposase, IS30, conserved site LOS88_17945 IPR012337 Ribonuclease H-like superfamily LOS88_17945 IPR001584 Integrase, catalytic core LOS88_17945 IPR009057 Homeobox-like domain superfamily LOS88_17955 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_17955 IPR023071 Transcriptional regulator, SlyA LOS88_17955 IPR023187 Transcriptional regulator MarR-type, conserved site LOS88_17955 IPR000835 MarR-type HTH domain LOS88_17955 IPR036390 Winged helix DNA-binding domain superfamily LOS88_17960 IPR005694 Efflux pump membrane protein LOS88_17960 IPR030196 Multidrug resistance protein MdtN LOS88_17960 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_17985 IPR000612 Proteolipid membrane potential modulator LOS88_17990 IPR001989 Radical-activating enzyme, conserved site LOS88_17990 IPR007197 Radical SAM LOS88_17990 IPR034457 Organic radical-activating enzymes LOS88_17990 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic LOS88_17990 IPR013785 Aldolase-type TIM barrel LOS88_17995 IPR001150 Glycine radical domain LOS88_17995 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic LOS88_17995 IPR005144 ATP-cone domain LOS88_17995 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LOS88_18005 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type LOS88_18005 IPR010994 RuvA domain 2-like LOS88_18005 IPR004150 NAD-dependent DNA ligase, OB-fold LOS88_18005 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LOS88_18005 IPR013839 NAD-dependent DNA ligase, adenylation LOS88_18005 IPR012340 Nucleic acid-binding, OB-fold LOS88_18005 IPR001357 BRCT domain LOS88_18005 IPR036420 BRCT domain superfamily LOS88_18005 IPR013840 NAD-dependent DNA ligase, N-terminal LOS88_18005 IPR018239 NAD-dependent DNA ligase, active site LOS88_18005 IPR033136 NAD-dependent DNA ligase, conserved site LOS88_18005 IPR041663 DisA/LigA, helix-hairpin-helix motif LOS88_18005 IPR001679 NAD-dependent DNA ligase LOS88_18010 IPR011919 Cell division protein ZipA LOS88_18010 IPR007449 ZipA, C-terminal FtsZ-binding domain LOS88_18010 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily LOS88_18015 IPR036277 SMCs flexible hinge superfamily LOS88_18015 IPR010935 SMCs flexible hinge LOS88_18015 IPR011890 Structural maintenance of chromosomes protein, prokaryotic LOS88_18015 IPR003395 RecF/RecN/SMC, N-terminal LOS88_18015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_18015 IPR024704 Structural maintenance of chromosomes protein LOS88_18020 IPR022985 Sulfate transporter CysZ LOS88_18025 IPR005115 Uncharacterised domain UPF0126 LOS88_18035 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LOS88_18035 IPR006311 Twin-arginine translocation pathway, signal sequence LOS88_18035 IPR010275 Protein of unknown function DUF882 LOS88_18040 IPR005490 L,D-transpeptidase catalytic domain LOS88_18040 IPR036365 PGBD-like superfamily LOS88_18040 IPR038063 L,D-transpeptidase catalytic domain-like LOS88_18040 IPR002477 Peptidoglycan binding-like LOS88_18055 IPR001173 Glycosyltransferase 2-like LOS88_18055 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_18070 IPR014635 Alpha-amylase, MalS type LOS88_18070 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_18070 IPR017853 Glycoside hydrolase superfamily LOS88_18080 IPR001789 Signal transduction response regulator, receiver domain LOS88_18080 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_18080 IPR000792 Transcription regulator LuxR, C-terminal LOS88_18080 IPR011006 CheY-like superfamily LOS88_18100 IPR006153 Cation/H+ exchanger LOS88_18100 IPR038770 Sodium/solute symporter superfamily LOS88_18100 IPR036291 NAD(P)-binding domain superfamily LOS88_18100 IPR006037 Regulator of K+ conductance, C-terminal LOS88_18100 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LOS88_18100 IPR003148 Regulator of K+ conductance, N-terminal LOS88_18105 IPR029787 Nucleotide cyclase LOS88_18105 IPR000160 GGDEF domain LOS88_18105 IPR029016 GAF-like domain superfamily LOS88_18110 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain LOS88_18110 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal LOS88_18110 IPR012094 tRNA(Ile)-lysidine synthase LOS88_18110 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal LOS88_18110 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LOS88_18110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_18125 IPR023685 Pyridoxal kinase PdxY LOS88_18125 IPR029056 Ribokinase-like LOS88_18125 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase LOS88_18125 IPR004625 Pyridoxine kinase LOS88_18130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_18130 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal LOS88_18130 IPR011193 Ornithine/lysine/arginine decarboxylase LOS88_18130 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_18130 IPR000310 Orn/Lys/Arg decarboxylase, major domain LOS88_18130 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal LOS88_18130 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily LOS88_18130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_18135 IPR002293 Amino acid/polyamine transporter I LOS88_18135 IPR004754 Amino acid antiporter LOS88_18140 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_18140 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18140 IPR039420 Transcriptional regulatory protein WalR-like LOS88_18140 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_18140 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_18140 IPR040970 CadC C-terminal domain 1 LOS88_18145 IPR002293 Amino acid/polyamine transporter I LOS88_18150 IPR005119 LysR, substrate-binding LOS88_18150 IPR000847 Transcription regulator HTH, LysR LOS88_18150 IPR036390 Winged helix DNA-binding domain superfamily LOS88_18150 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18155 IPR001279 Metallo-beta-lactamase LOS88_18155 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LOS88_18155 IPR013471 Ribonuclease Z/BN LOS88_18165 IPR004694 Hydroxy amino acid transporter LOS88_18170 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18170 IPR005119 LysR, substrate-binding LOS88_18170 IPR036390 Winged helix DNA-binding domain superfamily LOS88_18170 IPR000847 Transcription regulator HTH, LysR LOS88_18180 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LOS88_18180 IPR000399 TPP-binding enzyme, conserved site LOS88_18180 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LOS88_18180 IPR012000 Thiamine pyrophosphate enzyme, central domain LOS88_18180 IPR029061 Thiamin diphosphate-binding fold LOS88_18180 IPR029035 DHS-like NAD/FAD-binding domain superfamily LOS88_18180 IPR012782 Acetolactate synthase, catabolic LOS88_18185 IPR005128 Alpha-acetolactate decarboxylase LOS88_18190 IPR036390 Winged helix DNA-binding domain superfamily LOS88_18190 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain LOS88_18190 IPR005119 LysR, substrate-binding LOS88_18190 IPR000847 Transcription regulator HTH, LysR LOS88_18190 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18195 IPR002307 Tyrosine-tRNA ligase LOS88_18195 IPR036986 RNA-binding S4 domain superfamily LOS88_18195 IPR002305 Aminoacyl-tRNA synthetase, class Ic LOS88_18195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_18195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_18195 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 LOS88_18195 IPR024088 Tyrosine-tRNA ligase, bacterial-type LOS88_18195 IPR002942 RNA-binding S4 domain LOS88_18200 IPR016047 Peptidase M23 LOS88_18200 IPR013731 Opacity-associated protein A, N-terminal LOS88_18200 IPR018392 LysM domain LOS88_18200 IPR011055 Duplicated hybrid motif LOS88_18205 IPR005338 Anhydro-N-acetylmuramic acid kinase LOS88_18215 IPR006056 RidA family LOS88_18215 IPR019897 RidA, conserved site LOS88_18215 IPR035959 RutC-like superfamily LOS88_18215 IPR006175 YjgF/YER057c/UK114 family LOS88_18225 IPR029062 Class I glutamine amidotransferase-like LOS88_18225 IPR002818 DJ-1/PfpI LOS88_18225 IPR017283 Protein/nucleic acid deglycase HchA LOS88_18230 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18230 IPR036390 Winged helix DNA-binding domain superfamily LOS88_18230 IPR000847 Transcription regulator HTH, LysR LOS88_18230 IPR005119 LysR, substrate-binding LOS88_18245 IPR016039 Thiolase-like LOS88_18245 IPR020843 Polyketide synthase, enoylreductase domain LOS88_18245 IPR009081 Phosphopantetheine binding ACP domain LOS88_18245 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LOS88_18245 IPR013968 Polyketide synthase, ketoreductase domain LOS88_18245 IPR006162 Phosphopantetheine attachment site LOS88_18245 IPR042104 Polyketide synthase, dehydratase domain superfamily LOS88_18245 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LOS88_18245 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LOS88_18245 IPR020807 Polyketide synthase, dehydratase domain LOS88_18245 IPR036736 ACP-like superfamily LOS88_18245 IPR014043 Acyl transferase LOS88_18245 IPR013154 Alcohol dehydrogenase, N-terminal LOS88_18245 IPR011032 GroES-like superfamily LOS88_18245 IPR018201 Beta-ketoacyl synthase, active site LOS88_18245 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LOS88_18245 IPR014030 Beta-ketoacyl synthase, N-terminal LOS88_18245 IPR014031 Beta-ketoacyl synthase, C-terminal LOS88_18245 IPR036291 NAD(P)-binding domain superfamily LOS88_18245 IPR032821 Ketoacyl-synthetase, C-terminal extension LOS88_18255 IPR005474 Transketolase, N-terminal LOS88_18255 IPR033247 Transketolase family LOS88_18255 IPR033248 Transketolase, C-terminal domain LOS88_18255 IPR020826 Transketolase binding site LOS88_18255 IPR005478 Transketolase, bacterial-like LOS88_18255 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LOS88_18255 IPR005475 Transketolase-like, pyrimidine-binding domain LOS88_18255 IPR029061 Thiamin diphosphate-binding fold LOS88_18260 IPR022636 S-adenosylmethionine synthetase superfamily LOS88_18260 IPR022631 S-adenosylmethionine synthetase, conserved site LOS88_18260 IPR022630 S-adenosylmethionine synthetase, C-terminal LOS88_18260 IPR022629 S-adenosylmethionine synthetase, central domain LOS88_18260 IPR022628 S-adenosylmethionine synthetase, N-terminal LOS88_18260 IPR002133 S-adenosylmethionine synthetase LOS88_18265 IPR035240 SprT-like, zinc ribbon domain LOS88_18265 IPR023483 Uncharacterised protein family SprT LOS88_18265 IPR006640 SprT-like LOS88_18270 IPR007346 Endonuclease I LOS88_18275 IPR015947 PUA-like superfamily LOS88_18275 IPR006700 Ribosomal RNA small subunit methyltransferase E LOS88_18275 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LOS88_18275 IPR029028 Alpha/beta knot methyltransferases LOS88_18280 IPR011761 ATP-grasp fold LOS88_18280 IPR013815 ATP-grasp fold, subdomain 1 LOS88_18280 IPR006284 Glutathione synthetase, prokaryotic LOS88_18280 IPR004218 Prokaryotic glutathione synthetase, ATP-binding LOS88_18280 IPR004215 Prokaryotic glutathione synthetase, N-terminal LOS88_18280 IPR016185 Pre-ATP-grasp domain superfamily LOS88_18285 IPR003774 Protein of unknown function UPF0301 LOS88_18290 IPR037027 YqgF/RNase H-like domain superfamily LOS88_18290 IPR006641 YqgF/RNase H-like domain LOS88_18290 IPR005227 Putative pre-16S rRNA nuclease LOS88_18290 IPR012337 Ribonuclease H-like superfamily LOS88_18295 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site LOS88_18295 IPR000109 Proton-dependent oligopeptide transporter family LOS88_18295 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B LOS88_18295 IPR005279 Dipeptide/tripeptide permease LOS88_18295 IPR036259 MFS transporter superfamily LOS88_18300 IPR023746 Transcription regulator HTH, YidZ LOS88_18300 IPR005119 LysR, substrate-binding LOS88_18300 IPR000847 Transcription regulator HTH, LysR LOS88_18300 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18300 IPR036390 Winged helix DNA-binding domain superfamily LOS88_18300 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain LOS88_18305 IPR036259 MFS transporter superfamily LOS88_18305 IPR020846 Major facilitator superfamily domain LOS88_18305 IPR023697 Multidrug resistance protein MdtL LOS88_18305 IPR011701 Major facilitator superfamily LOS88_18310 IPR011703 ATPase, AAA-3 LOS88_18310 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_18310 IPR041628 ChlI/MoxR, AAA lid domain LOS88_18320 IPR025403 Domain of unknown function DUF4129 LOS88_18320 IPR038765 Papain-like cysteine peptidase superfamily LOS88_18320 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal LOS88_18320 IPR002931 Transglutaminase-like LOS88_18325 IPR001463 Sodium:alanine symporter LOS88_18330 IPR013785 Aldolase-type TIM barrel LOS88_18330 IPR001585 Transaldolase/Fructose-6-phosphate aldolase LOS88_18330 IPR004730 Transaldolase type 1 LOS88_18330 IPR018225 Transaldolase, active site LOS88_18340 IPR029045 ClpP/crotonase-like domain superfamily LOS88_18340 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal LOS88_18340 IPR001095 Acetyl-CoA carboxylase, alpha subunit LOS88_18345 IPR003141 Polymerase/histidinol phosphatase, N-terminal LOS88_18345 IPR040982 DNA polymerase III alpha subunit finger domain LOS88_18345 IPR029460 DNA polymerase, helix-hairpin-helix motif LOS88_18345 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LOS88_18345 IPR004013 PHP domain LOS88_18345 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain LOS88_18345 IPR016195 Polymerase/histidinol phosphatase-like LOS88_18345 IPR004805 DNA polymerase III, alpha subunit LOS88_18345 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain LOS88_18350 IPR001352 Ribonuclease HII/HIII LOS88_18350 IPR024567 Ribonuclease HII/HIII domain LOS88_18350 IPR012337 Ribonuclease H-like superfamily LOS88_18350 IPR036397 Ribonuclease H superfamily LOS88_18350 IPR022898 Ribonuclease HII LOS88_18355 IPR003835 Glycosyl transferase, family 19 LOS88_18360 IPR001451 Hexapeptide repeat LOS88_18360 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LOS88_18360 IPR011004 Trimeric LpxA-like superfamily LOS88_18360 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily LOS88_18360 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal LOS88_18365 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ LOS88_18365 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ LOS88_18365 IPR029069 HotDog domain superfamily LOS88_18370 IPR001451 Hexapeptide repeat LOS88_18370 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region LOS88_18370 IPR011004 Trimeric LpxA-like superfamily LOS88_18370 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD LOS88_18370 IPR018357 Hexapeptide transferase, conserved site LOS88_18375 IPR024930 Skp domain superfamily LOS88_18375 IPR005632 Chaperone protein Skp LOS88_18380 IPR000184 Bacterial surface antigen (D15) LOS88_18380 IPR010827 POTRA domain, BamA/TamA-like LOS88_18380 IPR039910 Surface antigen D15-like LOS88_18380 IPR023707 Outer membrane protein assembly factor BamA LOS88_18380 IPR034746 POTRA domain LOS88_18385 IPR008915 Peptidase M50 LOS88_18385 IPR001478 PDZ domain LOS88_18385 IPR041489 PDZ domain 6 LOS88_18385 IPR036034 PDZ superfamily LOS88_18385 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase LOS88_18390 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal LOS88_18390 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal LOS88_18390 IPR036291 NAD(P)-binding domain superfamily LOS88_18390 IPR026877 DXP reductoisomerase C-terminal domain LOS88_18390 IPR036169 DXP reductoisomerase, C-terminal domain superfamily LOS88_18390 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase LOS88_18395 IPR000374 Phosphatidate cytidylyltransferase LOS88_18400 IPR036424 Decaprenyl diphosphate synthase-like superfamily LOS88_18400 IPR001441 Decaprenyl diphosphate synthase-like LOS88_18400 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site LOS88_18405 IPR002661 Ribosome recycling factor LOS88_18405 IPR023584 Ribosome recycling factor domain LOS88_18405 IPR036191 RRF superfamily LOS88_18410 IPR036393 Acetylglutamate kinase-like superfamily LOS88_18410 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_18410 IPR011817 Uridylate kinase LOS88_18410 IPR015963 Uridylate kinase, bacteria LOS88_18415 IPR009060 UBA-like superfamily LOS88_18415 IPR001816 Translation elongation factor EFTs/EF1B LOS88_18415 IPR018101 Translation elongation factor Ts, conserved site LOS88_18415 IPR036402 Elongation factor Ts, dimerisation domain superfamily LOS88_18415 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation LOS88_18420 IPR001865 Ribosomal protein S2 LOS88_18420 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid LOS88_18420 IPR018130 Ribosomal protein S2, conserved site LOS88_18420 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily LOS88_18425 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 LOS88_18425 IPR000994 Peptidase M24 LOS88_18425 IPR001714 Peptidase M24, methionine aminopeptidase LOS88_18425 IPR036005 Creatinase/aminopeptidase-like LOS88_18430 IPR003607 HD/PDEase domain LOS88_18430 IPR002912 ACT domain LOS88_18430 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase LOS88_18430 IPR002934 Polymerase, nucleotidyl transferase domain LOS88_18430 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme LOS88_18430 IPR006674 HD domain LOS88_18435 IPR011004 Trimeric LpxA-like superfamily LOS88_18435 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 LOS88_18435 IPR018357 Hexapeptide transferase, conserved site LOS88_18435 IPR001451 Hexapeptide repeat LOS88_18435 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family LOS88_18435 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily LOS88_18440 IPR020911 Uncharacterised protein family UPF0325 LOS88_18445 IPR036878 Glucose permease domain IIB LOS88_18445 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LOS88_18445 IPR003352 Phosphotransferase system, EIIC LOS88_18445 IPR013013 Phosphotransferase system, EIIC component, type 1 LOS88_18445 IPR001996 Phosphotransferase system, IIB component, type 1 LOS88_18445 IPR011299 PTS system glucose-specific IIBC component LOS88_18445 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LOS88_18450 IPR010794 Maltose operon periplasmic LOS88_18455 IPR023738 Maltoporin LOS88_18455 IPR036998 Porin, LamB-type superfamily LOS88_18455 IPR003192 Porin, LamB-type LOS88_18460 IPR008254 Flavodoxin/nitric oxide synthase LOS88_18460 IPR029039 Flavoprotein-like superfamily LOS88_18460 IPR001094 Flavodoxin-like LOS88_18465 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_18465 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LOS88_18465 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_18470 IPR007384 Protein of unknown function UCP006257 LOS88_18470 IPR023376 YqcC-like domain LOS88_18470 IPR036814 YqcC-like superfamily LOS88_18495 IPR016908 Uncharacterised conserved protein UCP029037 LOS88_18500 IPR009948 Syd LOS88_18500 IPR038228 Syd superfamily LOS88_18505 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF LOS88_18505 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 LOS88_18505 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal LOS88_18515 IPR000160 GGDEF domain LOS88_18515 IPR029787 Nucleotide cyclase LOS88_18520 IPR031100 LOG family LOS88_18520 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily LOS88_18520 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal LOS88_18520 IPR021826 Domain of unknown function DUF3412 LOS88_18525 IPR022895 Flap endonuclease Xni LOS88_18525 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal LOS88_18525 IPR008918 Helix-hairpin-helix motif, class 2 LOS88_18525 IPR038969 Flap endonuclease LOS88_18525 IPR020045 DNA polymerase I-like, H3TH domain LOS88_18525 IPR036279 5'-3' exonuclease, C-terminal domain superfamily LOS88_18525 IPR002421 5'-3' exonuclease, N-terminal LOS88_18525 IPR029060 PIN-like domain superfamily LOS88_18530 IPR024084 Isopropylmalate dehydrogenase-like domain LOS88_18530 IPR040978 Hypothetical protein TT1725 LOS88_18530 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LOS88_18540 IPR040739 RlmM ferredoxin-like domain LOS88_18540 IPR002877 Ribosomal RNA methyltransferase FtsJ domain LOS88_18540 IPR011224 Ribosomal RNA large subunit methyltransferase M LOS88_18540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_18545 IPR006696 Protein of unknown function DUF423 LOS88_18555 IPR005119 LysR, substrate-binding LOS88_18555 IPR000847 Transcription regulator HTH, LysR LOS88_18555 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18555 IPR036390 Winged helix DNA-binding domain superfamily LOS88_18560 IPR003660 HAMP domain LOS88_18560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_18565 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LOS88_18565 IPR017961 DNA polymerase, Y-family, little finger domain LOS88_18565 IPR022880 DNA polymerase IV LOS88_18565 IPR001126 UmuC domain LOS88_18565 IPR024728 DNA polymerase type-Y, HhH motif LOS88_18575 IPR002818 DJ-1/PfpI LOS88_18575 IPR006287 Protein/nucleic acid deglycase DJ-1 LOS88_18575 IPR029062 Class I glutamine amidotransferase-like LOS88_18580 IPR036291 NAD(P)-binding domain superfamily LOS88_18580 IPR003710 Ketopantoate reductase ApbA/PanE LOS88_18580 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LOS88_18580 IPR013752 Ketopantoate reductase, C-terminal domain LOS88_18580 IPR013332 Ketopantoate reductase, N-terminal domain LOS88_18580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_18585 IPR035570 UPF0234, N-terminal LOS88_18585 IPR035571 UPF0234-like, C-terminal LOS88_18585 IPR007551 Protein of unknown function DUF520 LOS88_18585 IPR036183 YajQ-like superfamily LOS88_18590 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like LOS88_18590 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily LOS88_18595 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 LOS88_18595 IPR011701 Major facilitator superfamily LOS88_18595 IPR036259 MFS transporter superfamily LOS88_18595 IPR020846 Major facilitator superfamily domain LOS88_18600 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site LOS88_18600 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain LOS88_18600 IPR029000 Cyclophilin-like domain superfamily LOS88_18600 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase LOS88_18610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_18610 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_18610 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD LOS88_18610 IPR007848 Methyltransferase small domain LOS88_18615 IPR002634 BolA protein LOS88_18615 IPR036065 BolA-like superfamily LOS88_18620 IPR011053 Single hybrid motif LOS88_18620 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain LOS88_18620 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A LOS88_18625 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD LOS88_18625 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B LOS88_18630 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C LOS88_18630 IPR007329 FMN-binding LOS88_18635 IPR003667 NqrDE/RnfAE LOS88_18635 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D LOS88_18640 IPR003667 NqrDE/RnfAE LOS88_18640 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E LOS88_18645 IPR001433 Oxidoreductase FAD/NAD(P)-binding LOS88_18645 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_18645 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_18645 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_18645 IPR012675 Beta-grasp domain superfamily LOS88_18645 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LOS88_18645 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_18645 IPR017938 Riboflavin synthase-like beta-barrel LOS88_18645 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F LOS88_18650 IPR042159 Flavin-trafficking protein ApbE LOS88_18650 IPR003374 ApbE-like superfamily LOS88_18650 IPR024932 Flavin transferase ApbE LOS88_18680 IPR003333 Mycolic acid cyclopropane synthase LOS88_18680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_18695 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_18695 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_18695 IPR036291 NAD(P)-binding domain superfamily LOS88_18705 IPR002081 Cryptochrome/DNA photolyase class 1 LOS88_18705 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LOS88_18705 IPR006050 DNA photolyase, N-terminal LOS88_18705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_18705 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily LOS88_18705 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily LOS88_18705 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LOS88_18710 IPR009061 Putative DNA-binding domain superfamily LOS88_18710 IPR000551 MerR-type HTH domain LOS88_18715 IPR013560 Domain of unknown function DUF1722 LOS88_18730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_18730 IPR018317 Queuosine biosynthesis protein QueC LOS88_18745 IPR002912 ACT domain LOS88_18745 IPR018528 Prephenate dehydratase, conserved site LOS88_18745 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase LOS88_18745 IPR010952 Chorismate mutase, gammaproteobacteria LOS88_18745 IPR036263 Chorismate mutase type II superfamily LOS88_18745 IPR036979 Chorismate mutase domain superfamily LOS88_18745 IPR001086 Prephenate dehydratase LOS88_18745 IPR002701 Chorismate mutase II, prokaryotic-type LOS88_18775 IPR004090 Chemotaxis methyl-accepting receptor LOS88_18775 IPR003660 HAMP domain LOS88_18775 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_18780 IPR033900 Porin domain, Gram-negative type LOS88_18780 IPR023614 Porin domain superfamily LOS88_18780 IPR001702 Porin, Gram-negative type LOS88_18780 IPR002299 Porin, Neisseria sp. type LOS88_18820 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_18820 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_18820 IPR036291 NAD(P)-binding domain superfamily LOS88_18845 IPR001333 Peptidase M32, carboxypeptidase Taq LOS88_18875 IPR012902 Prokaryotic N-terminal methylation site LOS88_18875 IPR001082 Fimbrial protein pilin LOS88_18880 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LOS88_18880 IPR018062 HTH domain AraC-type, conserved site LOS88_18880 IPR004026 Ada DNA repair, metal-binding LOS88_18880 IPR009057 Homeobox-like domain superfamily LOS88_18880 IPR003265 HhH-GPD domain LOS88_18880 IPR011257 DNA glycosylase LOS88_18880 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily LOS88_18880 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LOS88_18880 IPR035451 Ada-like domain superfamily LOS88_18880 IPR018060 DNA binding HTH domain, AraC-type LOS88_18885 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18885 IPR023546 Methylated-DNA--protein-cysteine methyltransferase LOS88_18885 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site LOS88_18885 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain LOS88_18885 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding LOS88_18885 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily LOS88_18885 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain LOS88_18890 IPR020988 Peptidase U32, collagenase LOS88_18890 IPR001539 Peptidase U32 LOS88_18895 IPR004778 Homoserine/Threonine efflux protein LOS88_18895 IPR001123 Amino acid exporter protein, LeuE-type LOS88_18900 IPR005119 LysR, substrate-binding LOS88_18900 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain LOS88_18900 IPR000847 Transcription regulator HTH, LysR LOS88_18900 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_18900 IPR036390 Winged helix DNA-binding domain superfamily LOS88_18905 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LOS88_18905 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LOS88_18905 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LOS88_18905 IPR016039 Thiolase-like LOS88_18910 IPR033479 Double Cache domain 1 LOS88_18910 IPR003660 HAMP domain LOS88_18910 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_18910 IPR029151 Periplasmic sensor-like domain superfamily LOS88_18915 IPR011006 CheY-like superfamily LOS88_18915 IPR001789 Signal transduction response regulator, receiver domain LOS88_18925 IPR036641 HPT domain superfamily LOS88_18925 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding LOS88_18925 IPR004105 Histidine kinase CheA-like, homodimeric domain LOS88_18925 IPR035891 CheY-binding domain of CheA LOS88_18925 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_18925 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_18925 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_18925 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_18925 IPR005467 Histidine kinase domain LOS88_18925 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_18925 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily LOS88_18925 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily LOS88_18925 IPR002545 CheW-like domain LOS88_18925 IPR036061 CheW-like domain superfamily LOS88_18930 IPR004090 Chemotaxis methyl-accepting receptor LOS88_18930 IPR003660 HAMP domain LOS88_18930 IPR000727 Target SNARE coiled-coil homology domain LOS88_18930 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_18930 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain LOS88_18935 IPR036061 CheW-like domain superfamily LOS88_18935 IPR039315 Chemotaxis protein CheW LOS88_18935 IPR002545 CheW-like domain LOS88_18940 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_18940 IPR003660 HAMP domain LOS88_18940 IPR004090 Chemotaxis methyl-accepting receptor LOS88_18945 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily LOS88_18945 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LOS88_18945 IPR000780 MCP methyltransferase, CheR-type LOS88_18945 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LOS88_18945 IPR026024 Chemotaxis protein methyltransferase CheR LOS88_18945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_18950 IPR038592 CheD-like superfamily LOS88_18950 IPR005659 Chemoreceptor glutamine deamidase CheD LOS88_18950 IPR011324 Cytotoxic necrotizing factor-like, catalytic LOS88_18955 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type LOS88_18955 IPR035909 Methylesterase CheB, C-terminal LOS88_18955 IPR011006 CheY-like superfamily LOS88_18955 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase LOS88_18955 IPR001789 Signal transduction response regulator, receiver domain LOS88_18960 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_18960 IPR003029 S1 domain LOS88_18960 IPR022967 RNA-binding domain, S1 LOS88_18960 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily LOS88_18960 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain LOS88_18960 IPR027408 PNPase/RNase PH domain superfamily LOS88_18960 IPR012340 Nucleic acid-binding, OB-fold LOS88_18960 IPR012162 Polyribonucleotide nucleotidyltransferase LOS88_18960 IPR036612 K Homology domain, type 1 superfamily LOS88_18960 IPR001247 Exoribonuclease, phosphorolytic domain 1 LOS88_18960 IPR015847 Exoribonuclease, phosphorolytic domain 2 LOS88_18960 IPR036345 Exoribonuclease, PH domain 2 superfamily LOS88_18960 IPR004088 K Homology domain, type 1 LOS88_18960 IPR004087 K Homology domain LOS88_18965 IPR000589 Ribosomal protein S15 LOS88_18965 IPR005290 Ribosomal protein S15, bacterial-type LOS88_18965 IPR009068 S15/NS1, RNA-binding LOS88_18970 IPR032819 tRNA pseudouridylate synthase B, C-terminal LOS88_18970 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal LOS88_18970 IPR014780 tRNA pseudouridine synthase II, TruB LOS88_18970 IPR036974 PUA domain superfamily LOS88_18970 IPR002501 Pseudouridine synthase II, N-terminal LOS88_18970 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_18970 IPR015947 PUA-like superfamily LOS88_18975 IPR015946 K homology domain-like, alpha/beta LOS88_18975 IPR000238 Ribosome-binding factor A LOS88_18975 IPR023799 Ribosome-binding factor A domain superfamily LOS88_18975 IPR020053 Ribosome-binding factor A, conserved site LOS88_18980 IPR000178 Translation initiation factor aIF-2, bacterial-like LOS88_18980 IPR000795 Transcription factor, GTP-binding domain LOS88_18980 IPR005225 Small GTP-binding protein domain LOS88_18980 IPR036925 Translation initiation factor IF-2, domain 3 superfamily LOS88_18980 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_18980 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_18980 IPR006847 Translation initiation factor IF-2, N-terminal LOS88_18980 IPR013575 Initiation factor 2 associated domain, bacterial LOS88_18980 IPR009061 Putative DNA-binding domain superfamily LOS88_18980 IPR015760 Translation initiation factor IF- 2 LOS88_18980 IPR023115 Translation initiation factor IF- 2, domain 3 LOS88_18985 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical LOS88_18985 IPR015946 K homology domain-like, alpha/beta LOS88_18985 IPR009019 K homology domain superfamily, prokaryotic type LOS88_18985 IPR025249 KH domain, NusA-like LOS88_18985 IPR003029 S1 domain LOS88_18985 IPR010214 Transcription termination factor NusA, C-terminal duplication LOS88_18985 IPR022967 RNA-binding domain, S1 LOS88_18985 IPR013735 Transcription factor NusA, N-terminal LOS88_18985 IPR036555 NusA, N-terminal domain superfamily LOS88_18985 IPR010213 Transcription termination factor NusA LOS88_18985 IPR012340 Nucleic acid-binding, OB-fold LOS88_18985 IPR030842 Transcription termination/antitermination protein NusA, bacterial LOS88_18990 IPR035956 RimP, N-terminal domain superfamily LOS88_18990 IPR028989 Ribosome maturation factor RimP, N-terminal LOS88_18990 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily LOS88_18990 IPR028998 Ribosome maturation factor RimP, C-terminal LOS88_18990 IPR003728 Ribosome maturation factor RimP LOS88_19005 IPR004692 Preprotein translocase SecG subunit LOS88_19010 IPR035990 Triosephosphate isomerase superfamily LOS88_19010 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic LOS88_19010 IPR013785 Aldolase-type TIM barrel LOS88_19010 IPR020861 Triosephosphate isomerase, active site LOS88_19010 IPR000652 Triosephosphate isomerase LOS88_19015 IPR006352 Phosphoglucosamine mutase, bacterial type LOS88_19015 IPR016066 Alpha-D-phosphohexomutase, conserved site LOS88_19015 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LOS88_19015 IPR005841 Alpha-D-phosphohexomutase superfamily LOS88_19015 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LOS88_19015 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LOS88_19015 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LOS88_19015 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LOS88_19015 IPR005843 Alpha-D-phosphohexomutase, C-terminal LOS88_19020 IPR006390 Dihydropteroate synthase LOS88_19020 IPR011005 Dihydropteroate synthase-like LOS88_19020 IPR000489 Pterin-binding domain LOS88_19025 IPR037219 Peptidase M41-like LOS88_19025 IPR000642 Peptidase M41 LOS88_19025 IPR011546 Peptidase M41, FtsH extracellular LOS88_19025 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19025 IPR005936 Peptidase, FtsH LOS88_19025 IPR003960 ATPase, AAA-type, conserved site LOS88_19025 IPR003959 ATPase, AAA-type, core LOS88_19025 IPR003593 AAA+ ATPase domain LOS88_19025 IPR041569 AAA ATPase, AAA+ lid domain LOS88_19030 IPR015507 Ribosomal RNA large subunit methyltransferase E LOS88_19030 IPR002877 Ribosomal RNA methyltransferase FtsJ domain LOS88_19030 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria LOS88_19030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_19035 IPR035920 YhbY-like superfamily LOS88_19035 IPR001890 RNA-binding, CRM domain LOS88_19035 IPR017924 RNA-binding protein YhbY LOS88_19045 IPR028624 Transcription elongation factor GreA/GreB LOS88_19045 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily LOS88_19045 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal LOS88_19045 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LOS88_19045 IPR006359 Transcription elongation factor GreA LOS88_19045 IPR023459 Transcription elongation factor GreA/GreB family LOS88_19045 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LOS88_19045 IPR018151 Transcription elongation factor, GreA/GreB, conserved site LOS88_19050 IPR025713 Motility protein B, N-terminal domain LOS88_19050 IPR006665 OmpA-like domain LOS88_19050 IPR036737 OmpA-like domain superfamily LOS88_19055 IPR000540 Flagellar motor protein MotA, conserved site LOS88_19055 IPR002898 MotA/TolQ/ExbB proton channel LOS88_19060 IPR037004 Exonuclease VII, small subunit superfamily LOS88_19060 IPR003761 Exonuclease VII, small subunit LOS88_19065 IPR033749 Polyprenyl synthetase, conserved site LOS88_19065 IPR000092 Polyprenyl synthetase LOS88_19065 IPR008949 Isoprenoid synthase domain superfamily LOS88_19070 IPR005477 Deoxyxylulose-5-phosphate synthase LOS88_19070 IPR029061 Thiamin diphosphate-binding fold LOS88_19070 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LOS88_19070 IPR005475 Transketolase-like, pyrimidine-binding domain LOS88_19070 IPR020826 Transketolase binding site LOS88_19070 IPR033248 Transketolase, C-terminal domain LOS88_19075 IPR006146 5'-Nucleotidase, conserved site LOS88_19075 IPR029052 Metallo-dependent phosphatase-like LOS88_19075 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LOS88_19075 IPR008334 5'-Nucleotidase, C-terminal LOS88_19075 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN LOS88_19075 IPR006179 5'-Nucleotidase/apyrase LOS88_19075 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LOS88_19095 IPR025944 Sigma-54 interaction domain, conserved site LOS88_19095 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_19095 IPR001789 Signal transduction response regulator, receiver domain LOS88_19095 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_19095 IPR002197 DNA binding HTH domain, Fis-type LOS88_19095 IPR009057 Homeobox-like domain superfamily LOS88_19095 IPR011006 CheY-like superfamily LOS88_19095 IPR003593 AAA+ ATPase domain LOS88_19095 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19100 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LOS88_19100 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal LOS88_19100 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily LOS88_19110 IPR007236 SlyX LOS88_19115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_19115 IPR035906 MetI-like superfamily LOS88_19115 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LOS88_19120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_19120 IPR035906 MetI-like superfamily LOS88_19125 IPR000914 Solute-binding protein family 5 domain LOS88_19125 IPR023765 Solute-binding protein family 5, conserved site LOS88_19125 IPR039424 Solute-binding protein family 5 LOS88_19125 IPR030678 Peptide/nickel binding protein, MppA-type LOS88_19130 IPR003593 AAA+ ATPase domain LOS88_19130 IPR003439 ABC transporter-like LOS88_19130 IPR017871 ABC transporter, conserved site LOS88_19130 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LOS88_19130 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19135 IPR026037 Phosphatidylglycerophosphatase A LOS88_19135 IPR036681 PgpA-like superfamily LOS88_19135 IPR007686 YutG/PgpA domain LOS88_19140 IPR006283 Thiamine-monophosphate kinase LOS88_19140 IPR010918 PurM-like, C-terminal domain LOS88_19140 IPR036676 PurM-like, C-terminal domain superfamily LOS88_19140 IPR016188 PurM-like, N-terminal domain LOS88_19140 IPR036921 PurM-like, N-terminal domain superfamily LOS88_19145 IPR011605 NusB antitermination factor LOS88_19145 IPR035926 NusB-like superfamily LOS88_19145 IPR006027 NusB/RsmB/TIM44 LOS88_19150 IPR034964 Lumazine synthase LOS88_19150 IPR002180 Lumazine/riboflavin synthase LOS88_19150 IPR036467 Lumazine/riboflavin synthase superfamily LOS88_19155 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LOS88_19155 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB LOS88_19155 IPR032677 GTP cyclohydrolase II LOS88_19155 IPR036144 RibA-like superfamily LOS88_19160 IPR026017 Lumazine-binding domain LOS88_19160 IPR017938 Riboflavin synthase-like beta-barrel LOS88_19160 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LOS88_19160 IPR001783 Lumazine-binding protein LOS88_19165 IPR016192 APOBEC/CMP deaminase, zinc-binding LOS88_19165 IPR002125 Cytidine and deoxycytidylate deaminase domain LOS88_19165 IPR016193 Cytidine deaminase-like LOS88_19165 IPR024072 Dihydrofolate reductase-like domain superfamily LOS88_19165 IPR004794 Riboflavin biosynthesis protein RibD LOS88_19165 IPR011549 Riboflavin-specific deaminase, C-terminal LOS88_19165 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal LOS88_19170 IPR005144 ATP-cone domain LOS88_19170 IPR003796 Ribonucleotide reductase regulator NrdR-like LOS88_19175 IPR039429 Serine hydroxymethyltransferase-like domain LOS88_19175 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site LOS88_19175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_19175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_19175 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_19175 IPR001085 Serine hydroxymethyltransferase LOS88_19185 IPR038188 TorS, sensor domain superfamily LOS88_19185 IPR001789 Signal transduction response regulator, receiver domain LOS88_19185 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_19185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_19185 IPR037952 Sensor histidine kinase TorS, sensor domain LOS88_19185 IPR036641 HPT domain superfamily LOS88_19185 IPR003660 HAMP domain LOS88_19185 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_19185 IPR005467 Histidine kinase domain LOS88_19185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_19185 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_19185 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_19185 IPR011006 CheY-like superfamily LOS88_19190 IPR014301 TMAO reductase system, periplasmic protein TorT LOS88_19190 IPR001761 Periplasmic binding protein/LacI sugar binding domain LOS88_19190 IPR028082 Periplasmic binding protein-like I LOS88_19200 IPR011006 CheY-like superfamily LOS88_19200 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_19200 IPR039420 Transcriptional regulatory protein WalR-like LOS88_19200 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_19200 IPR001789 Signal transduction response regulator, receiver domain LOS88_19205 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK LOS88_19205 IPR011031 Multihaem cytochrome LOS88_19205 IPR036280 Multiheme cytochrome superfamily LOS88_19205 IPR005126 NapC/NirT cytochrome c, N-terminal LOS88_19205 IPR038266 NapC/NirT cytochrome c superfamily LOS88_19210 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site LOS88_19210 IPR011887 Trimethylamine-N-oxide reductase TorA LOS88_19210 IPR006311 Twin-arginine translocation pathway, signal sequence LOS88_19210 IPR006656 Molybdopterin oxidoreductase LOS88_19210 IPR041460 Molybdopterin oxidoreductase, N-terminal LOS88_19210 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain LOS88_19210 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase LOS88_19210 IPR009010 Aspartate decarboxylase-like domain superfamily LOS88_19210 IPR006657 Molybdopterin dinucleotide-binding domain LOS88_19215 IPR023069 Chaperone TorD LOS88_19215 IPR020945 DMSO/Nitrate reductase chaperone LOS88_19215 IPR036386 HscB, C-terminal domain superfamily LOS88_19215 IPR036411 TorD-like superfamily LOS88_19225 IPR029787 Nucleotide cyclase LOS88_19225 IPR005330 MHYT domain LOS88_19225 IPR000160 GGDEF domain LOS88_19225 IPR035919 EAL domain superfamily LOS88_19225 IPR001633 EAL domain LOS88_19235 IPR042099 AMP-dependent synthetase-like superfamily LOS88_19235 IPR000873 AMP-dependent synthetase/ligase LOS88_19235 IPR020845 AMP-binding, conserved site LOS88_19235 IPR025110 AMP-binding enzyme, C-terminal domain LOS88_19235 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain LOS88_19235 IPR011904 Acetate-CoA ligase LOS88_19240 IPR018509 Dehydroquinase, class II, conserved site LOS88_19240 IPR036441 Dehydroquinase, class II superfamily LOS88_19240 IPR001874 Dehydroquinase, class II LOS88_19245 IPR001249 Acetyl-CoA biotin carboxyl carrier LOS88_19245 IPR001882 Biotin-binding site LOS88_19245 IPR000089 Biotin/lipoyl attachment LOS88_19245 IPR011053 Single hybrid motif LOS88_19250 IPR016185 Pre-ATP-grasp domain superfamily LOS88_19250 IPR011054 Rudiment single hybrid motif LOS88_19250 IPR005482 Biotin carboxylase, C-terminal LOS88_19250 IPR011764 Biotin carboxylation domain LOS88_19250 IPR005481 Biotin carboxylase-like, N-terminal domain LOS88_19250 IPR013815 ATP-grasp fold, subdomain 1 LOS88_19250 IPR011761 ATP-grasp fold LOS88_19250 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase LOS88_19250 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LOS88_19260 IPR038377 Sodium/glucose symporter superfamily LOS88_19260 IPR011849 Sodium/pantothenate symporter LOS88_19260 IPR001734 Sodium/solute symporter LOS88_19260 IPR018212 Sodium/solute symporter, conserved site LOS88_19265 IPR011055 Duplicated hybrid motif LOS88_19265 IPR036878 Glucose permease domain IIB LOS88_19265 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LOS88_19265 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LOS88_19265 IPR003352 Phosphotransferase system, EIIC LOS88_19265 IPR001996 Phosphotransferase system, IIB component, type 1 LOS88_19265 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component LOS88_19265 IPR013013 Phosphotransferase system, EIIC component, type 1 LOS88_19270 IPR036390 Winged helix DNA-binding domain superfamily LOS88_19270 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_19270 IPR000847 Transcription regulator HTH, LysR LOS88_19270 IPR005119 LysR, substrate-binding LOS88_19275 IPR013149 Alcohol dehydrogenase, C-terminal LOS88_19275 IPR013154 Alcohol dehydrogenase, N-terminal LOS88_19275 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 LOS88_19275 IPR011032 GroES-like superfamily LOS88_19275 IPR036291 NAD(P)-binding domain superfamily LOS88_19275 IPR020843 Polyketide synthase, enoylreductase domain LOS88_19275 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site LOS88_19280 IPR004498 Ribosomal protein L11 methyltransferase LOS88_19280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_19285 IPR001451 Hexapeptide repeat LOS88_19285 IPR018357 Hexapeptide transferase, conserved site LOS88_19285 IPR024688 Maltose/galactoside acetyltransferase LOS88_19285 IPR011004 Trimeric LpxA-like superfamily LOS88_19290 IPR029479 Nitroreductase LOS88_19290 IPR000415 Nitroreductase-like LOS88_19290 IPR026021 Putative NAD(P)H nitroreductase YdjA-like LOS88_19295 IPR023753 FAD/NAD(P)-binding domain LOS88_19295 IPR013785 Aldolase-type TIM barrel LOS88_19295 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_19295 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LOS88_19300 IPR033854 Signal peptide peptidase A LOS88_19300 IPR002142 Peptidase S49 LOS88_19300 IPR029045 ClpP/crotonase-like domain superfamily LOS88_19300 IPR004634 Peptidase S49, protease IV LOS88_19300 IPR004635 Peptidase S49, SppA LOS88_19305 IPR005490 L,D-transpeptidase catalytic domain LOS88_19305 IPR041597 L,D-transpeptidase C-terminal domain LOS88_19305 IPR038063 L,D-transpeptidase catalytic domain-like LOS88_19320 IPR003400 Biopolymer transport protein ExbD/TolR LOS88_19325 IPR002898 MotA/TolQ/ExbB proton channel LOS88_19330 IPR002898 MotA/TolQ/ExbB proton channel LOS88_19345 IPR002559 Transposase, IS4-like LOS88_19345 IPR032806 H repeat-associated protein, N-terminal LOS88_19350 IPR039426 Vitamin B12 transporter BtuB-like LOS88_19350 IPR010917 TonB-dependent receptor, conserved site LOS88_19350 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LOS88_19350 IPR010101 TonB-dependent vitamin B12 transporter BtuB LOS88_19350 IPR000531 TonB-dependent receptor-like, beta-barrel LOS88_19350 IPR037066 TonB-dependent receptor, plug domain superfamily LOS88_19350 IPR012910 TonB-dependent receptor, plug domain LOS88_19350 IPR010916 TonB box, conserved site LOS88_19355 IPR001598 Transposase, IS30, conserved site LOS88_19355 IPR036397 Ribonuclease H superfamily LOS88_19355 IPR012337 Ribonuclease H-like superfamily LOS88_19355 IPR001584 Integrase, catalytic core LOS88_19355 IPR009057 Homeobox-like domain superfamily LOS88_19360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_19360 IPR035906 MetI-like superfamily LOS88_19365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_19365 IPR035906 MetI-like superfamily LOS88_19365 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LOS88_19375 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19375 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LOS88_19375 IPR003439 ABC transporter-like LOS88_19375 IPR003593 AAA+ ATPase domain LOS88_19375 IPR017871 ABC transporter, conserved site LOS88_19380 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LOS88_19380 IPR017871 ABC transporter, conserved site LOS88_19380 IPR003439 ABC transporter-like LOS88_19380 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19380 IPR003593 AAA+ ATPase domain LOS88_19390 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type LOS88_19390 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal LOS88_19390 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation LOS88_19390 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_19390 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal LOS88_19390 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily LOS88_19390 IPR036291 NAD(P)-binding domain superfamily LOS88_19390 IPR017476 UDP-glucose/GDP-mannose dehydrogenase LOS88_19395 IPR036291 NAD(P)-binding domain superfamily LOS88_19395 IPR001509 NAD-dependent epimerase/dehydratase LOS88_19400 IPR018648 Protein of unknown function DUF2076 LOS88_19410 IPR023346 Lysozyme-like domain superfamily LOS88_19410 IPR000189 Prokaryotic transglycosylase, active site LOS88_19410 IPR008258 Transglycosylase SLT domain 1 LOS88_19425 IPR022374 Energy-dependent translational throttle protein EttA LOS88_19425 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19425 IPR003439 ABC transporter-like LOS88_19425 IPR032781 ABC-transporter extension domain LOS88_19425 IPR003593 AAA+ ATPase domain LOS88_19425 IPR017871 ABC transporter, conserved site LOS88_19435 IPR026033 Azaguanine-like transporters LOS88_19435 IPR006043 Xanthine/uracil/vitamin C permease LOS88_19440 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding LOS88_19440 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 LOS88_19440 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_19440 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial LOS88_19440 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LOS88_19440 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LOS88_19440 IPR033910 Glutamyl-tRNA synthetase LOS88_19440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_19445 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_19445 IPR003660 HAMP domain LOS88_19455 IPR002059 Cold-shock protein, DNA-binding LOS88_19455 IPR012156 Cold shock, CspA LOS88_19455 IPR012340 Nucleic acid-binding, OB-fold LOS88_19455 IPR011129 Cold shock domain LOS88_19455 IPR019844 Cold-shock (CSD) domain LOS88_19495 IPR013520 Exonuclease, RNase T/DNA polymerase III LOS88_19495 IPR022894 Oligoribonuclease LOS88_19495 IPR012337 Ribonuclease H-like superfamily LOS88_19495 IPR036397 Ribonuclease H superfamily LOS88_19500 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LOS88_19500 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19500 IPR004881 Ribosome biogenesis GTPase RsgA LOS88_19500 IPR010914 RsgA GTPase domain LOS88_19505 IPR003817 Phosphatidylserine decarboxylase-related LOS88_19505 IPR033177 Phosphatidylserine decarboxylase LOS88_19505 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 LOS88_19510 IPR036361 SAP domain superfamily LOS88_19510 IPR018668 DNA-binding protein VF530-like LOS88_19525 IPR015590 Aldehyde dehydrogenase domain LOS88_19525 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site LOS88_19525 IPR012134 Glutamate-5-semialdehyde dehydrogenase LOS88_19525 IPR000965 GPR domain LOS88_19525 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_19525 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_19525 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_19530 IPR036974 PUA domain superfamily LOS88_19530 IPR002478 PUA domain LOS88_19530 IPR015947 PUA-like superfamily LOS88_19530 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase LOS88_19530 IPR036393 Acetylglutamate kinase-like superfamily LOS88_19530 IPR041739 Glutamate-5-kinase domain LOS88_19530 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_19530 IPR019797 Glutamate 5-kinase, conserved site LOS88_19530 IPR001057 Glutamate/acetylglutamate kinase LOS88_19530 IPR011529 Glutamate 5-kinase LOS88_19535 IPR009986 Sigma factor-binding transcriptional regulator Crl LOS88_19535 IPR038208 Sigma factor-binding protein Crl superfamily LOS88_19540 IPR010520 UPF0255 family LOS88_19540 IPR029058 Alpha/Beta hydrolase fold LOS88_19545 IPR029057 Phosphoribosyltransferase-like LOS88_19545 IPR023747 Xanthine-guanine phosphoribosyltransferase LOS88_19545 IPR000836 Phosphoribosyltransferase domain LOS88_19550 IPR002933 Peptidase M20 LOS88_19550 IPR011650 Peptidase M20, dimerisation domain LOS88_19550 IPR001160 Peptidase M20C, Xaa-His dipeptidase LOS88_19555 IPR029024 TerB-like LOS88_19555 IPR036869 Chaperone J-domain superfamily LOS88_19555 IPR001623 DnaJ domain LOS88_19555 IPR007791 Co-chaperone DjlA, N-terminal LOS88_19555 IPR023749 Co-chaperone DjlA LOS88_19560 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_19560 IPR005835 Nucleotidyl transferase domain LOS88_19565 IPR002575 Aminoglycoside phosphotransferase LOS88_19565 IPR011009 Protein kinase-like domain superfamily LOS88_19570 IPR020889 LPS-assembly protein LptD LOS88_19570 IPR007543 LptD, C-terminal LOS88_19570 IPR005653 Organic solvent tolerance-like, N-terminal LOS88_19575 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LOS88_19575 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LOS88_19575 IPR023034 Peptidyl-prolyl isomerase SurA LOS88_19575 IPR015391 SurA N-terminal LOS88_19575 IPR027304 Trigger factor/SurA domain superfamily LOS88_19580 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase LOS88_19580 IPR005255 PdxA family LOS88_19585 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LOS88_19585 IPR023165 rRNA adenine dimethylase-like LOS88_19585 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site LOS88_19585 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal LOS88_19585 IPR011530 Ribosomal RNA adenine dimethylase LOS88_19585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_19590 IPR007474 ApaG domain LOS88_19590 IPR036767 ApaG domain superfamily LOS88_19590 IPR023065 Uncharacterised protein family ApaG LOS88_19595 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) LOS88_19595 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LOS88_19595 IPR029052 Metallo-dependent phosphatase-like LOS88_19610 IPR011251 Luciferase-like domain LOS88_19610 IPR036661 Luciferase-like domain superfamily LOS88_19610 IPR019949 Luciferase family oxidoreductase, group 1 LOS88_19620 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_19625 IPR014100 GTP-binding protein Obg/CgtA LOS88_19625 IPR006074 GTP1/OBG, conserved site LOS88_19625 IPR006169 GTP1/OBG domain LOS88_19625 IPR036726 GTP1/OBG domain superfamily LOS88_19625 IPR006073 GTP binding domain LOS88_19625 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19625 IPR031167 OBG-type guanine nucleotide-binding (G) domain LOS88_19625 IPR035101 GTP-binding protein, Obg-type LOS88_19630 IPR001684 Ribosomal protein L27 LOS88_19630 IPR018261 Ribosomal protein L27, conserved site LOS88_19635 IPR036164 L21-like superfamily LOS88_19635 IPR028909 Ribosomal protein L21-like LOS88_19635 IPR001787 Ribosomal protein L21 LOS88_19635 IPR018258 Ribosomal protein L21, conserved site LOS88_19640 IPR008949 Isoprenoid synthase domain superfamily LOS88_19640 IPR000092 Polyprenyl synthetase LOS88_19640 IPR033749 Polyprenyl synthetase, conserved site LOS88_19645 IPR019201 Protein of unknown function DUF2065 LOS88_19650 IPR010200 HflC LOS88_19650 IPR001107 Band 7 domain LOS88_19650 IPR036013 Band 7/SPFH domain superfamily LOS88_19655 IPR001972 Stomatin family LOS88_19655 IPR020980 Menbrane protein HflK, N-terminal LOS88_19655 IPR010201 HflK LOS88_19655 IPR036013 Band 7/SPFH domain superfamily LOS88_19655 IPR001107 Band 7 domain LOS88_19660 IPR042108 GTPase HflX, N-terminal domain superfamily LOS88_19660 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19660 IPR025121 GTPase HflX, N-terminal LOS88_19660 IPR030394 HflX-type guanine nucleotide-binding (G) domain LOS88_19660 IPR032305 GTP-binding protein, middle domain LOS88_19660 IPR006073 GTP binding domain LOS88_19660 IPR016496 GTPase HflX LOS88_19660 IPR035647 EF-G domain III/V-like LOS88_19665 IPR005001 RNA-binding protein Hfq LOS88_19665 IPR010920 LSM domain superfamily LOS88_19670 IPR039657 Dimethylallyltransferase LOS88_19670 IPR018022 IPP transferase LOS88_19670 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19675 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_19675 IPR037198 MutL, C-terminal domain superfamily LOS88_19675 IPR042121 MutL, C-terminal domain, regulatory subdomain LOS88_19675 IPR042120 MutL, C-terminal domain, dimerisation subdomain LOS88_19675 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_19675 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms LOS88_19675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_19675 IPR013507 DNA mismatch repair protein, S5 domain 2-like LOS88_19675 IPR002099 DNA mismatch repair protein family, N-terminal LOS88_19675 IPR014762 DNA mismatch repair, conserved site LOS88_19675 IPR020667 DNA mismatch repair protein, MutL LOS88_19675 IPR014790 MutL, C-terminal, dimerisation LOS88_19680 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_19680 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_19680 IPR037198 MutL, C-terminal domain superfamily LOS88_19680 IPR042121 MutL, C-terminal domain, regulatory subdomain LOS88_19680 IPR042120 MutL, C-terminal domain, dimerisation subdomain LOS88_19680 IPR014790 MutL, C-terminal, dimerisation LOS88_19680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_19680 IPR013507 DNA mismatch repair protein, S5 domain 2-like LOS88_19680 IPR002099 DNA mismatch repair protein family, N-terminal LOS88_19680 IPR020667 DNA mismatch repair protein, MutL LOS88_19680 IPR014762 DNA mismatch repair, conserved site LOS88_19680 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms LOS88_19685 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LOS88_19690 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19690 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE LOS88_19695 IPR036652 YjeF N-terminal domain superfamily LOS88_19695 IPR004443 YjeF N-terminal domain LOS88_19695 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr LOS88_19695 IPR017953 Carbohydrate kinase, predicted, conserved site LOS88_19695 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase LOS88_19695 IPR029056 Ribokinase-like LOS88_19700 IPR013542 Domain of unknown function DUF1730 LOS88_19700 IPR004453 Epoxyqueuosine reductase QueG LOS88_19700 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_19700 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_19705 IPR000600 ROK family LOS88_19715 IPR003593 AAA+ ATPase domain LOS88_19715 IPR026253 Methionine import ATP-binding protein MetN LOS88_19715 IPR003439 ABC transporter-like LOS88_19715 IPR017871 ABC transporter, conserved site LOS88_19715 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal LOS88_19715 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain LOS88_19715 IPR018449 NIL domain LOS88_19715 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19715 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria LOS88_19720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_19720 IPR035906 MetI-like superfamily LOS88_19725 IPR004872 Lipoprotein NlpA family LOS88_19730 IPR006645 NusG, N-terminal LOS88_19730 IPR036735 NusG, N-terminal domain superfamily LOS88_19730 IPR010215 Transcription antitermination protein RfaH LOS88_19735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_19735 IPR004090 Chemotaxis methyl-accepting receptor LOS88_19735 IPR003660 HAMP domain LOS88_19740 IPR001633 EAL domain LOS88_19740 IPR035919 EAL domain superfamily LOS88_19740 IPR000160 GGDEF domain LOS88_19740 IPR005330 MHYT domain LOS88_19740 IPR029787 Nucleotide cyclase LOS88_19745 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_19745 IPR001789 Signal transduction response regulator, receiver domain LOS88_19745 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal LOS88_19745 IPR038388 RcsC, C-terminal domain superfamily LOS88_19745 IPR005467 Histidine kinase domain LOS88_19745 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_19745 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_19745 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_19745 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_19745 IPR011006 CheY-like superfamily LOS88_19745 IPR030856 Sensor histidine kinase RcsC LOS88_19765 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily LOS88_19765 IPR006261 dNTP triphosphohydrolase LOS88_19765 IPR020779 dNTP triphosphohydrolase, type 1 LOS88_19765 IPR003607 HD/PDEase domain LOS88_19765 IPR006674 HD domain LOS88_19765 IPR026875 Phosphohydrolase-associated domain LOS88_19770 IPR040642 Histidine kinase receptor ArcB, transmembrane domain LOS88_19770 IPR005467 Histidine kinase domain LOS88_19770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_19770 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily LOS88_19770 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_19770 IPR011006 CheY-like superfamily LOS88_19770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_19770 IPR001789 Signal transduction response regulator, receiver domain LOS88_19770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_19770 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LOS88_19770 IPR013767 PAS fold LOS88_19770 IPR035965 PAS domain superfamily LOS88_19770 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB LOS88_19770 IPR000700 PAS-associated, C-terminal LOS88_19770 IPR000014 PAS domain LOS88_19770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_19770 IPR036641 HPT domain superfamily LOS88_19790 IPR018635 Uncharacterised protein family UPF0319 LOS88_19795 IPR000847 Transcription regulator HTH, LysR LOS88_19795 IPR036390 Winged helix DNA-binding domain superfamily LOS88_19795 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_19795 IPR005119 LysR, substrate-binding LOS88_19805 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type LOS88_19805 IPR028923 SAICAR synthetase/ADE2, N-terminal LOS88_19810 IPR042268 Outer membrane protein assembly factor BamC, C-terminal LOS88_19810 IPR014524 Outer membrane protein assembly factor BamC LOS88_19810 IPR010653 NlpB/DapX lipoprotein LOS88_19815 IPR013785 Aldolase-type TIM barrel LOS88_19815 IPR020625 Schiff base-forming aldolase, active site LOS88_19815 IPR002220 DapA-like LOS88_19815 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA LOS88_19820 IPR016867 Glycine cleavage system transcriptional repressor LOS88_19820 IPR002912 ACT domain LOS88_19825 IPR036249 Thioredoxin-like superfamily LOS88_19825 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LOS88_19825 IPR024706 Peroxiredoxin, AhpC-type LOS88_19825 IPR013766 Thioredoxin domain LOS88_19830 IPR005587 Uncharacterised protein family UPF0304, YfbU LOS88_19830 IPR023146 YfbU, alpha-helical bundle domain superfamily LOS88_19830 IPR023145 YfbU, helix-hairpin domain superfamily LOS88_19835 IPR007334 Uncharacterised protein family UPF0208 LOS88_19840 IPR000890 Aliphatic acid kinase, short-chain LOS88_19840 IPR023865 Aliphatic acid kinase, short-chain, conserved site LOS88_19840 IPR004372 Acetate/propionate kinase LOS88_19845 IPR002505 Phosphate acetyl/butaryl transferase LOS88_19845 IPR042112 Phosphate acetyltransferase, domain 2 LOS88_19845 IPR042113 Phosphate acetyltransferase, domain 1 LOS88_19845 IPR004614 Phosphate acetyltransferase LOS88_19845 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19845 IPR016475 Phosphate acetyltransferase, bacteria LOS88_19845 IPR010766 DRTGG LOS88_19845 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily LOS88_19850 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LOS88_19850 IPR010994 RuvA domain 2-like LOS88_19855 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type LOS88_19855 IPR005835 Nucleotidyl transferase domain LOS88_19855 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_19860 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site LOS88_19860 IPR000109 Proton-dependent oligopeptide transporter family LOS88_19860 IPR005279 Dipeptide/tripeptide permease LOS88_19860 IPR020846 Major facilitator superfamily domain LOS88_19860 IPR036259 MFS transporter superfamily LOS88_19865 IPR011006 CheY-like superfamily LOS88_19865 IPR036457 PPM-type phosphatase domain superfamily LOS88_19865 IPR001789 Signal transduction response regulator, receiver domain LOS88_19865 IPR028616 Regulator of RpoS LOS88_19865 IPR039420 Transcriptional regulatory protein WalR-like LOS88_19895 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LOS88_19900 IPR003423 Outer membrane efflux protein LOS88_19900 IPR010130 Type I secretion outer membrane protein, TolC LOS88_19905 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 LOS88_19905 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal LOS88_19905 IPR032887 tRNA-dihydrouridine synthase B LOS88_19905 IPR013785 Aldolase-type TIM barrel LOS88_19905 IPR001269 tRNA-dihydrouridine synthase LOS88_19905 IPR035587 DUS-like, FMN-binding domain LOS88_19905 IPR018517 tRNA-dihydrouridine synthase, conserved site LOS88_19910 IPR002197 DNA binding HTH domain, Fis-type LOS88_19910 IPR005412 DNA-binding protein Fis LOS88_19910 IPR009057 Homeobox-like domain superfamily LOS88_19925 IPR017961 DNA polymerase, Y-family, little finger domain LOS88_19925 IPR025188 Domain of unknown function DUF4113 LOS88_19925 IPR024728 DNA polymerase type-Y, HhH motif LOS88_19925 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LOS88_19925 IPR001126 UmuC domain LOS88_19930 IPR039418 LexA-like LOS88_19930 IPR015927 Peptidase S24/S26A/S26B/S26C LOS88_19930 IPR036286 LexA/Signal peptidase-like superfamily LOS88_19930 IPR006197 Peptidase S24, LexA-like LOS88_19945 IPR036397 Ribonuclease H superfamily LOS88_19945 IPR012337 Ribonuclease H-like superfamily LOS88_19945 IPR006120 Resolvase, HTH domain LOS88_19945 IPR001584 Integrase, catalytic core LOS88_19945 IPR017894 HTH domain, IS21 transposase-type LOS88_19950 IPR002611 IstB-like ATP-binding protein LOS88_19950 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LOS88_19950 IPR001270 ClpA/B family LOS88_19950 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_19950 IPR003593 AAA+ ATPase domain LOS88_19960 IPR009057 Homeobox-like domain superfamily LOS88_19960 IPR012337 Ribonuclease H-like superfamily LOS88_19960 IPR038717 Tc1-like transposase, DDE domain LOS88_19960 IPR025959 Winged helix-turn helix domain LOS88_20000 IPR023905 Acetyldiaminopimelate deacetylase LOS88_20000 IPR017439 Amidohydrolase LOS88_20000 IPR036264 Bacterial exopeptidase dimerisation domain LOS88_20000 IPR002933 Peptidase M20 LOS88_20005 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20005 IPR005119 LysR, substrate-binding LOS88_20005 IPR000847 Transcription regulator HTH, LysR LOS88_20005 IPR036390 Winged helix DNA-binding domain superfamily LOS88_20010 IPR004778 Homoserine/Threonine efflux protein LOS88_20010 IPR001123 Amino acid exporter protein, LeuE-type LOS88_20015 IPR004789 Acetolactate synthase, small subunit LOS88_20015 IPR019455 Acetolactate synthase, small subunit, C-terminal LOS88_20015 IPR002912 ACT domain LOS88_20015 IPR039557 AHAS, ACT domain LOS88_20015 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal LOS88_20020 IPR012846 Acetolactate synthase, large subunit, biosynthetic LOS88_20020 IPR039368 Acetolactate synthase large subunit, TPP binding domain LOS88_20020 IPR029035 DHS-like NAD/FAD-binding domain superfamily LOS88_20020 IPR029061 Thiamin diphosphate-binding fold LOS88_20020 IPR012000 Thiamine pyrophosphate enzyme, central domain LOS88_20020 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LOS88_20020 IPR000399 TPP-binding enzyme, conserved site LOS88_20020 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LOS88_20035 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LOS88_20035 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LOS88_20050 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site LOS88_20050 IPR013785 Aldolase-type TIM barrel LOS88_20050 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain LOS88_20050 IPR005671 2-isopropylmalate synthase, bacterial-type LOS88_20050 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily LOS88_20050 IPR000891 Pyruvate carboxyltransferase LOS88_20055 IPR024084 Isopropylmalate dehydrogenase-like domain LOS88_20055 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LOS88_20055 IPR004429 Isopropylmalate dehydrogenase LOS88_20060 IPR033941 3-Isopropylmalate dehydratase, catalytic domain LOS88_20060 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LOS88_20060 IPR018136 Aconitase family, 4Fe-4S cluster binding site LOS88_20060 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LOS88_20060 IPR036008 Aconitase, iron-sulfur domain LOS88_20060 IPR004430 3-isopropylmalate dehydratase, large subunit LOS88_20065 IPR004431 3-isopropylmalate dehydratase, small subunit LOS88_20065 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LOS88_20065 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain LOS88_20065 IPR033940 3-isopropylmalate dehydratase, swivel domain LOS88_20080 IPR006061 Solute-binding family 1, conserved site LOS88_20080 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria LOS88_20080 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter LOS88_20085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_20085 IPR035906 MetI-like superfamily LOS88_20085 IPR005947 Thiamine ABC transporter, permease protein LOS88_20090 IPR003593 AAA+ ATPase domain LOS88_20090 IPR017871 ABC transporter, conserved site LOS88_20090 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ LOS88_20090 IPR003439 ABC transporter-like LOS88_20090 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20095 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20095 IPR003714 PhoH-like protein LOS88_20095 IPR029060 PIN-like domain superfamily LOS88_20095 IPR002716 PIN domain LOS88_20105 IPR013554 Ribonucleotide reductase N-terminal LOS88_20105 IPR039718 Ribonucleoside-diphosphate reductase large subunit LOS88_20105 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal LOS88_20105 IPR013509 Ribonucleotide reductase large subunit, N-terminal LOS88_20105 IPR013346 Ribonucleotide reductase, class I , alpha subunit LOS88_20105 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE LOS88_20105 IPR000788 Ribonucleotide reductase large subunit, C-terminal LOS88_20135 IPR035919 EAL domain superfamily LOS88_20135 IPR005330 MHYT domain LOS88_20135 IPR000160 GGDEF domain LOS88_20135 IPR029787 Nucleotide cyclase LOS88_20135 IPR001633 EAL domain LOS88_20145 IPR018370 Chaperonin Cpn60, conserved site LOS88_20145 IPR001844 Chaperonin Cpn60 LOS88_20145 IPR002423 Chaperonin Cpn60/TCP-1 family LOS88_20145 IPR027409 GroEL-like apical domain superfamily LOS88_20145 IPR027413 GroEL-like equatorial domain superfamily LOS88_20145 IPR027410 TCP-1-like chaperonin intermediate domain superfamily LOS88_20150 IPR011032 GroES-like superfamily LOS88_20150 IPR020818 GroES chaperonin family LOS88_20150 IPR037124 GroES chaperonin superfamily LOS88_20150 IPR018369 Chaperonin GroES, conserved site LOS88_20155 IPR002528 Multi antimicrobial extrusion protein LOS88_20160 IPR007313 FxsA cytoplasmic membrane protein LOS88_20165 IPR004708 Aspartate ammonia-lyase LOS88_20165 IPR024083 Fumarase/histidase, N-terminal LOS88_20165 IPR018951 Fumarase C, C-terminal LOS88_20165 IPR020557 Fumarate lyase, conserved site LOS88_20165 IPR000362 Fumarate lyase family LOS88_20165 IPR022761 Fumarate lyase, N-terminal LOS88_20165 IPR008948 L-Aspartase-like LOS88_20170 IPR004668 Anaerobic c4-dicarboxylate membrane transporter LOS88_20175 IPR000905 Gcp-like domain LOS88_20175 IPR017861 Kae1/TsaD family LOS88_20175 IPR017860 Peptidase M22, conserved site LOS88_20175 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD LOS88_20180 IPR038380 Ribosomal protein S21 superfamily LOS88_20180 IPR001911 Ribosomal protein S21 LOS88_20180 IPR018278 Ribosomal protein S21, conserved site LOS88_20185 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like LOS88_20185 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 LOS88_20185 IPR019004 Uncharacterised protein YqeY/Aim41 LOS88_20185 IPR042184 YqeY/Aim41, N-terminal domain LOS88_20190 IPR019475 DNA primase, DnaB-helicase binding domain LOS88_20190 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LOS88_20190 IPR013264 DNA primase, catalytic core, N-terminal LOS88_20190 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily LOS88_20190 IPR006295 DNA primase, DnaG LOS88_20190 IPR002694 Zinc finger, CHC2-type LOS88_20190 IPR036977 DNA Primase, CHC2-type zinc finger LOS88_20190 IPR006171 TOPRIM domain LOS88_20190 IPR013173 DNA primase DnaG, DnaB-binding domain LOS88_20190 IPR030846 DNA primase DnaG, bacteria LOS88_20190 IPR034151 Bacterial DnaG primase, TOPRIM domain LOS88_20195 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20195 IPR012760 RNA polymerase sigma factor RpoD, C-terminal LOS88_20195 IPR013324 RNA polymerase sigma factor, region 3/4-like LOS88_20195 IPR013325 RNA polymerase sigma factor, region 2 LOS88_20195 IPR042189 Sigma-70 factor, region 1.1 superfamily LOS88_20195 IPR007127 RNA polymerase sigma factor 70, region 1.1 LOS88_20195 IPR028630 RNA polymerase sigma factor RpoD LOS88_20195 IPR007630 RNA polymerase sigma-70 region 4 LOS88_20195 IPR007624 RNA polymerase sigma-70 region 3 LOS88_20195 IPR007627 RNA polymerase sigma-70 region 2 LOS88_20195 IPR009042 RNA polymerase sigma-70 region 1.2 LOS88_20195 IPR000943 RNA polymerase sigma-70 LOS88_20195 IPR014284 RNA polymerase sigma-70 like domain LOS88_20195 IPR007631 RNA polymerase sigma factor 70, non-essential domain LOS88_20215 IPR011054 Rudiment single hybrid motif LOS88_20215 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal LOS88_20215 IPR020559 Phosphoribosylglycinamide synthetase, conserved site LOS88_20215 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily LOS88_20215 IPR016185 Pre-ATP-grasp domain superfamily LOS88_20215 IPR000115 Phosphoribosylglycinamide synthetase LOS88_20215 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LOS88_20215 IPR013815 ATP-grasp fold, subdomain 1 LOS88_20215 IPR011761 ATP-grasp fold LOS88_20215 IPR020560 Phosphoribosylglycinamide synthetase, C-domain LOS88_20220 IPR036914 Methylglyoxal synthase-like domain superfamily LOS88_20220 IPR002695 Bifunctional purine biosynthesis protein PurH-like LOS88_20220 IPR016193 Cytidine deaminase-like LOS88_20220 IPR011607 Methylglyoxal synthase-like domain LOS88_20220 IPR024051 AICAR transformylase, duplicated domain superfamily LOS88_20225 IPR000551 MerR-type HTH domain LOS88_20225 IPR011794 Hg(II)-responsive transcriptional regulator LOS88_20225 IPR009061 Putative DNA-binding domain superfamily LOS88_20235 IPR005589 Alternative ribosome-rescue factor A LOS88_20240 IPR034505 Anaerobic coproporphyrinogen-III oxidase LOS88_20240 IPR006638 Elp3/MiaB/NifB LOS88_20240 IPR010723 HemN, C-terminal LOS88_20240 IPR004559 Heme chaperone HemW-like LOS88_20240 IPR007197 Radical SAM LOS88_20240 IPR023404 Radical SAM, alpha/beta horseshoe LOS88_20245 IPR020922 dITP/XTP pyrophosphatase LOS88_20245 IPR002637 Ham1-like protein LOS88_20245 IPR029001 Inosine triphosphate pyrophosphatase-like LOS88_20250 IPR023697 Multidrug resistance protein MdtL LOS88_20250 IPR036259 MFS transporter superfamily LOS88_20250 IPR020846 Major facilitator superfamily domain LOS88_20250 IPR011701 Major facilitator superfamily LOS88_20255 IPR000683 Oxidoreductase, N-terminal LOS88_20255 IPR004104 Oxidoreductase, C-terminal LOS88_20255 IPR036291 NAD(P)-binding domain superfamily LOS88_20265 IPR016181 Acyl-CoA N-acyltransferase LOS88_20265 IPR000182 GNAT domain LOS88_20270 IPR016181 Acyl-CoA N-acyltransferase LOS88_20270 IPR000182 GNAT domain LOS88_20275 IPR025711 PepSY domain LOS88_20275 IPR007280 Peptidase, C-terminal, archaeal/bacterial LOS88_20275 IPR023612 Peptidase M4 LOS88_20275 IPR027268 Peptidase M4/M1, CTD superfamily LOS88_20275 IPR001570 Peptidase M4, C-terminal LOS88_20275 IPR013856 Peptidase M4 domain LOS88_20275 IPR011096 FTP domain LOS88_20280 IPR036390 Winged helix DNA-binding domain superfamily LOS88_20280 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20280 IPR005119 LysR, substrate-binding LOS88_20280 IPR000847 Transcription regulator HTH, LysR LOS88_20285 IPR020846 Major facilitator superfamily domain LOS88_20285 IPR036259 MFS transporter superfamily LOS88_20285 IPR022855 Multidrug resistance protein MdtH LOS88_20285 IPR011701 Major facilitator superfamily LOS88_20290 IPR016181 Acyl-CoA N-acyltransferase LOS88_20290 IPR000182 GNAT domain LOS88_20295 IPR000795 Transcription factor, GTP-binding domain LOS88_20295 IPR005225 Small GTP-binding protein domain LOS88_20295 IPR041732 Peptide chain release factor 3, GTP-binding domain LOS88_20295 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily LOS88_20295 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20295 IPR004548 Peptide chain release factor 3 LOS88_20295 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_20295 IPR004161 Translation elongation factor EFTu-like, domain 2 LOS88_20295 IPR035647 EF-G domain III/V-like LOS88_20295 IPR032090 Peptide chain release factor 3, C-terminal LOS88_20295 IPR031157 Tr-type G domain, conserved site LOS88_20300 IPR036291 NAD(P)-binding domain superfamily LOS88_20300 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_20305 IPR011006 CheY-like superfamily LOS88_20305 IPR029787 Nucleotide cyclase LOS88_20305 IPR001789 Signal transduction response regulator, receiver domain LOS88_20305 IPR000160 GGDEF domain LOS88_20310 IPR008912 Uncharacterised protein family CoxE-like LOS88_20310 IPR036465 von Willebrand factor A-like domain superfamily LOS88_20310 IPR002035 von Willebrand factor, type A LOS88_20310 IPR023481 Uncharacterised protein family ViaA LOS88_20315 IPR023671 ATPase RavA LOS88_20315 IPR022547 ATPase, RavA, C-terminal LOS88_20315 IPR003593 AAA+ ATPase domain LOS88_20315 IPR041538 ATPase RavA-like, AAA lid domain LOS88_20315 IPR011704 ATPase, dynein-related, AAA domain LOS88_20315 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20325 IPR016181 Acyl-CoA N-acyltransferase LOS88_20325 IPR000182 GNAT domain LOS88_20325 IPR017813 Mycothiol acetyltransferase LOS88_20335 IPR020845 AMP-binding, conserved site LOS88_20335 IPR000873 AMP-dependent synthetase/ligase LOS88_20335 IPR042099 AMP-dependent synthetase-like superfamily LOS88_20340 IPR006334 Glutamate--cysteine ligase, monofunctional LOS88_20340 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LOS88_20340 IPR007370 Glutamate--cysteine ligase LOS88_20345 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LOS88_20345 IPR011765 Peptidase M16, N-terminal LOS88_20345 IPR001431 Peptidase M16, zinc-binding site LOS88_20345 IPR007863 Peptidase M16, C-terminal LOS88_20350 IPR032816 SNARE associated Golgi protein LOS88_20355 IPR013149 Alcohol dehydrogenase, C-terminal LOS88_20355 IPR013154 Alcohol dehydrogenase, N-terminal LOS88_20355 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LOS88_20355 IPR011032 GroES-like superfamily LOS88_20355 IPR036291 NAD(P)-binding domain superfamily LOS88_20355 IPR020843 Polyketide synthase, enoylreductase domain LOS88_20380 IPR033892 Ferredoxin--NADP reductase, bacteria LOS88_20380 IPR017938 Riboflavin synthase-like beta-barrel LOS88_20380 IPR001433 Oxidoreductase FAD/NAD(P)-binding LOS88_20380 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_20380 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LOS88_20380 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_20385 IPR020594 Ribosomal protein L9, bacteria/chloroplast LOS88_20385 IPR036935 Ribosomal protein L9, N-terminal domain superfamily LOS88_20385 IPR020070 Ribosomal protein L9, N-terminal LOS88_20385 IPR036791 Ribosomal protein L9, C-terminal domain superfamily LOS88_20385 IPR020069 Ribosomal protein L9, C-terminal LOS88_20385 IPR000244 Ribosomal protein L9 LOS88_20385 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LOS88_20390 IPR001648 Ribosomal protein S18 LOS88_20390 IPR018275 Ribosomal protein S18, conserved site LOS88_20390 IPR036870 Ribosomal protein S18 superfamily LOS88_20395 IPR000529 Ribosomal protein S6 LOS88_20395 IPR020814 Ribosomal protein S6, plastid/chloroplast LOS88_20395 IPR035980 Ribosomal protein S6 superfamily LOS88_20395 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LOS88_20400 IPR001046 NRAMP family LOS88_20405 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LOS88_20405 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LOS88_20405 IPR003156 DHHA1 domain LOS88_20405 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_20405 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal LOS88_20405 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain LOS88_20405 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily LOS88_20405 IPR002318 Alanine-tRNA ligase, class IIc LOS88_20405 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria LOS88_20415 IPR000119 Histone-like DNA-binding protein LOS88_20415 IPR020816 Histone-like DNA-binding protein, conserved site LOS88_20415 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LOS88_20420 IPR038309 Rsd/AlgQ superfamily LOS88_20420 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LOS88_20425 IPR027021 Cyclic di-GMP binding protein, PA4608 type LOS88_20425 IPR009875 PilZ domain LOS88_20430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_20430 IPR041166 LapB, rubredoxin metal binding domain LOS88_20430 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_20430 IPR003593 AAA+ ATPase domain LOS88_20430 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20430 IPR004504 DNA repair protein RadA LOS88_20430 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain LOS88_20445 IPR036412 HAD-like superfamily LOS88_20445 IPR023214 HAD superfamily LOS88_20445 IPR023190 Phosphoserine phosphatase, domain 2 LOS88_20445 IPR041449 Phosphoserine phosphatase, N-terminal LOS88_20455 IPR035994 Nucleoside phosphorylase superfamily LOS88_20455 IPR000845 Nucleoside phosphorylase domain LOS88_20455 IPR004402 Purine nucleoside phosphorylase DeoD-type LOS88_20455 IPR018016 Nucleoside phosphorylase, conserved site LOS88_20460 IPR017850 Alkaline-phosphatase-like, core domain superfamily LOS88_20460 IPR010045 Phosphopentomutase LOS88_20460 IPR006124 Metalloenzyme LOS88_20460 IPR024052 Phosphopentomutase DeoB cap domain superfamily LOS88_20465 IPR013465 Thymidine phosphorylase LOS88_20465 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic LOS88_20465 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal LOS88_20465 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase LOS88_20465 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LOS88_20465 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily LOS88_20465 IPR000312 Glycosyl transferase, family 3 LOS88_20465 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site LOS88_20465 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LOS88_20465 IPR017459 Glycosyl transferase family 3, N-terminal domain LOS88_20470 IPR013785 Aldolase-type TIM barrel LOS88_20470 IPR011343 Deoxyribose-phosphate aldolase LOS88_20470 IPR002915 DeoC/FbaB/ lacD aldolase LOS88_20470 IPR023649 Deoxyribose-phosphate aldolase type II LOS88_20480 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_20480 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LOS88_20480 IPR002668 Concentrative nucleoside transporter N-terminal domain LOS88_20480 IPR011657 Concentrative nucleoside transporter C-terminal domain LOS88_20480 IPR008276 Concentrative nucleoside transporter LOS88_20485 IPR001130 TatD family LOS88_20485 IPR032466 Metal-dependent hydrolase LOS88_20485 IPR018228 Deoxyribonuclease, TatD-related, conserved site LOS88_20490 IPR012902 Prokaryotic N-terminal methylation site LOS88_20495 IPR003815 S-ribosylhomocysteinase (LuxS) LOS88_20495 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily LOS88_20495 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LOS88_20505 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LOS88_20505 IPR002332 Nitrogen regulatory protein P-II, urydylation site LOS88_20505 IPR017918 Nitrogen regulatory protein PII, conserved site LOS88_20505 IPR011322 Nitrogen regulatory PII-like, alpha/beta LOS88_20505 IPR002187 Nitrogen regulatory protein PII LOS88_20510 IPR014445 Glutamine-dependent NAD(+) synthetase LOS88_20510 IPR022310 NAD/GMP synthase LOS88_20510 IPR003694 NAD(+) synthetase LOS88_20510 IPR003010 Carbon-nitrogen hydrolase LOS88_20510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_20510 IPR036526 Carbon-nitrogen hydrolase superfamily LOS88_20510 IPR000132 Nitrilase/cyanide hydratase, conserved site LOS88_20530 IPR008707 PilC beta-propeller domain LOS88_20530 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LOS88_20550 IPR031982 Type IV minor pilin ComP LOS88_20550 IPR012902 Prokaryotic N-terminal methylation site LOS88_20555 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LOS88_20560 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LOS88_20565 IPR001872 Peptidase A8, signal peptidase II LOS88_20570 IPR010663 Zinc finger, FPG/IleRS-type LOS88_20570 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LOS88_20570 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LOS88_20570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_20570 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LOS88_20570 IPR023585 Isoleucine-tRNA ligase, type 1 LOS88_20570 IPR002301 Isoleucine-tRNA ligase LOS88_20570 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain LOS88_20570 IPR002300 Aminoacyl-tRNA synthetase, class Ia LOS88_20570 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LOS88_20575 IPR015864 FAD synthetase LOS88_20575 IPR023468 Riboflavin kinase LOS88_20575 IPR002606 Riboflavin kinase, bacterial LOS88_20575 IPR023465 Riboflavin kinase domain superfamily LOS88_20575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_20575 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic LOS88_20580 IPR004268 Peptidoglycan biosynthesis protein MurJ LOS88_20585 IPR036510 Ribosomal protein S20 superfamily LOS88_20585 IPR002583 Ribosomal protein S20 LOS88_20590 IPR001845 HTH ArsR-type DNA-binding domain LOS88_20590 IPR011991 ArsR-like helix-turn-helix domain LOS88_20590 IPR036390 Winged helix DNA-binding domain superfamily LOS88_20590 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20595 IPR005119 LysR, substrate-binding LOS88_20595 IPR000847 Transcription regulator HTH, LysR LOS88_20595 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20595 IPR036390 Winged helix DNA-binding domain superfamily LOS88_20605 IPR023171 Na/H antiporter domain superfamily LOS88_20605 IPR004670 Na+/H+ antiporter NhaA LOS88_20610 IPR020940 Thymidylate synthase, active site LOS88_20610 IPR000398 Thymidylate synthase LOS88_20610 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily LOS88_20610 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain LOS88_20615 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt LOS88_20620 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LOS88_20620 IPR008731 Phosphotransferase system, enzyme I N-terminal LOS88_20620 IPR006318 Phosphotransferase system, enzyme I-like LOS88_20620 IPR036637 Phosphohistidine domain superfamily LOS88_20620 IPR040442 Pyruvate kinase-like domain superfamily LOS88_20620 IPR000121 PEP-utilising enzyme, C-terminal LOS88_20620 IPR003018 GAF domain LOS88_20620 IPR023151 PEP-utilising enzyme, conserved site LOS88_20620 IPR029016 GAF-like domain superfamily LOS88_20620 IPR036618 PtsI, HPr-binding domain superfamily LOS88_20620 IPR018274 PEP-utilising enzyme, active site LOS88_20620 IPR008279 PEP-utilising enzyme, mobile domain LOS88_20625 IPR020476 NUDIX hydrolase LOS88_20625 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_20625 IPR020084 NUDIX hydrolase, conserved site LOS88_20625 IPR000086 NUDIX hydrolase domain LOS88_20625 IPR022927 RNA pyrophosphohydrolase RppH LOS88_20630 IPR011335 Restriction endonuclease type II-like LOS88_20630 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II LOS88_20630 IPR004230 DNA mismatch repair protein MutH LOS88_20630 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily LOS88_20640 IPR038657 Ribosomal protein L19 superfamily LOS88_20640 IPR018257 Ribosomal protein L19, conserved site LOS88_20640 IPR008991 Translation protein SH3-like domain superfamily LOS88_20640 IPR001857 Ribosomal protein L19 LOS88_20645 IPR029028 Alpha/beta knot methyltransferases LOS88_20645 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria LOS88_20645 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal LOS88_20645 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LOS88_20645 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain LOS88_20650 IPR036976 RimM, N-terminal domain superfamily LOS88_20650 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_20650 IPR002676 RimM, N-terminal LOS88_20650 IPR027275 PRC-barrel domain LOS88_20650 IPR011033 PRC-barrel-like superfamily LOS88_20650 IPR011961 16S rRNA processing protein RimM LOS88_20655 IPR023803 Ribosomal protein S16 domain superfamily LOS88_20655 IPR000307 Ribosomal protein S16 LOS88_20660 IPR003593 AAA+ ATPase domain LOS88_20660 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LOS88_20660 IPR022941 Signal recognition particle, SRP54 subunit LOS88_20660 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily LOS88_20660 IPR004125 Signal recognition particle, SRP54 subunit, M-domain LOS88_20660 IPR013822 Signal recognition particle SRP54, helical bundle LOS88_20660 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily LOS88_20660 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20660 IPR004780 Signal recognition particle protein LOS88_20665 IPR002541 Cytochrome c assembly protein LOS88_20670 IPR000644 CBS domain LOS88_20670 IPR002550 CNNM, transmembrane domain LOS88_20670 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_20670 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_20670 IPR005170 Transporter-associated domain LOS88_20675 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20675 IPR036390 Winged helix DNA-binding domain superfamily LOS88_20675 IPR000944 Transcription regulator Rrf2-type LOS88_20675 IPR023761 Transcriptional repressor HTH, NsrR LOS88_20675 IPR030489 Transcription regulator Rrf2-type, conserved site LOS88_20680 IPR017938 Riboflavin synthase-like beta-barrel LOS88_20680 IPR001433 Oxidoreductase FAD/NAD(P)-binding LOS88_20680 IPR023950 Flavohemoprotein LOS88_20680 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_20680 IPR009050 Globin-like superfamily LOS88_20680 IPR000971 Globin LOS88_20680 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_20680 IPR012292 Globin/Protoglobin LOS88_20680 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LOS88_20685 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_20685 IPR006597 Sel1-like repeat LOS88_20690 IPR022383 Lactate/malate dehydrogenase, C-terminal LOS88_20690 IPR001236 Lactate/malate dehydrogenase, N-terminal LOS88_20690 IPR001252 Malate dehydrogenase, active site LOS88_20690 IPR010097 Malate dehydrogenase, type 1 LOS88_20690 IPR023958 Malate dehydrogenase, type 1, bacterial LOS88_20690 IPR036291 NAD(P)-binding domain superfamily LOS88_20690 IPR001557 L-lactate/malate dehydrogenase LOS88_20690 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LOS88_20695 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_20695 IPR035906 MetI-like superfamily LOS88_20695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_20700 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_20700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_20700 IPR035906 MetI-like superfamily LOS88_20705 IPR001320 Ionotropic glutamate receptor LOS88_20705 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter LOS88_20705 IPR018313 Solute-binding protein family 3, conserved site LOS88_20705 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_20710 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20710 IPR017871 ABC transporter, conserved site LOS88_20710 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LOS88_20710 IPR003593 AAA+ ATPase domain LOS88_20710 IPR003439 ABC transporter-like LOS88_20715 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20715 IPR001669 Arginine repressor LOS88_20715 IPR036251 Arginine repressor, C-terminal domain superfamily LOS88_20715 IPR020900 Arginine repressor, DNA-binding domain LOS88_20715 IPR036390 Winged helix DNA-binding domain superfamily LOS88_20715 IPR020899 Arginine repressor, C-terminal LOS88_20720 IPR006314 Dyp-type peroxidase LOS88_20720 IPR011008 Dimeric alpha-beta barrel LOS88_20725 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA LOS88_20725 IPR003439 ABC transporter-like LOS88_20725 IPR017871 ABC transporter, conserved site LOS88_20725 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_20725 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20725 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit LOS88_20725 IPR013611 Transport-associated OB, type 2 LOS88_20725 IPR003593 AAA+ ATPase domain LOS88_20735 IPR026045 Ferric binding protein LOS88_20735 IPR006059 Bacterial extracellular solute-binding protein LOS88_20740 IPR002332 Nitrogen regulatory protein P-II, urydylation site LOS88_20740 IPR017918 Nitrogen regulatory protein PII, conserved site LOS88_20740 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LOS88_20740 IPR011322 Nitrogen regulatory PII-like, alpha/beta LOS88_20740 IPR002187 Nitrogen regulatory protein PII LOS88_20745 IPR000352 Peptide chain release factor class I LOS88_20750 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20750 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily LOS88_20750 IPR023546 Methylated-DNA--protein-cysteine methyltransferase LOS88_20750 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain LOS88_20750 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain LOS88_20750 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding LOS88_20750 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site LOS88_20760 IPR005583 Peroxide stress protein YaaA LOS88_20765 IPR006321 Pilus retraction protein PilT LOS88_20765 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20765 IPR001482 Type II/IV secretion system protein LOS88_20770 IPR006321 Pilus retraction protein PilT LOS88_20770 IPR001482 Type II/IV secretion system protein LOS88_20770 IPR003593 AAA+ ATPase domain LOS88_20770 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20775 IPR001608 Alanine racemase, N-terminal LOS88_20775 IPR029066 PLP-binding barrel LOS88_20775 IPR011078 Pyridoxal phosphate homeostasis protein LOS88_20780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_20780 IPR036291 NAD(P)-binding domain superfamily LOS88_20780 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LOS88_20780 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain LOS88_20780 IPR000304 Pyrroline-5-carboxylate reductase LOS88_20785 IPR003425 CCB3/YggT LOS88_20790 IPR005228 Conserved hypothetical protein CHP00251 LOS88_20790 IPR003746 Protein of unknown function DUF167 LOS88_20790 IPR036591 YggU-like superfamily LOS88_20800 IPR008276 Concentrative nucleoside transporter LOS88_20800 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LOS88_20800 IPR002668 Concentrative nucleoside transporter N-terminal domain LOS88_20800 IPR011657 Concentrative nucleoside transporter C-terminal domain LOS88_20800 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LOS88_20805 IPR005119 LysR, substrate-binding LOS88_20805 IPR000847 Transcription regulator HTH, LysR LOS88_20805 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20805 IPR036390 Winged helix DNA-binding domain superfamily LOS88_20810 IPR000889 Glutathione peroxidase LOS88_20810 IPR029759 Glutathione peroxidase active site LOS88_20810 IPR036249 Thioredoxin-like superfamily LOS88_20820 IPR018193 Glycerate kinase, flavodoxin-like fold LOS88_20820 IPR004381 Glycerate kinase LOS88_20820 IPR018197 Glycerate kinase, restriction-enzyme-like fold LOS88_20820 IPR036129 Glycerate kinase superfamily LOS88_20825 IPR003474 Gluconate transporter LOS88_20830 IPR025736 PucR C-terminal helix-turn-helix domain LOS88_20830 IPR008599 Putative sugar diacid recognition LOS88_20830 IPR041522 CdaR, GGDEF-like domain LOS88_20830 IPR042070 PucR C-terminal helix-turn-helix domain superfamily LOS88_20835 IPR008249 Uncharacterised protein family UPF0231 LOS88_20860 IPR005135 Endonuclease/exonuclease/phosphatase LOS88_20860 IPR017766 Sphingomyelinase C/phospholipase C LOS88_20860 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LOS88_20870 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_20870 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_20870 IPR011545 DEAD/DEAH box helicase domain LOS88_20870 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_20870 IPR001650 Helicase, C-terminal LOS88_20870 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_20870 IPR028622 ATP-dependent RNA helicase RhlE LOS88_20880 IPR018219 Thiol peroxidase conserved site LOS88_20880 IPR013740 Redoxin LOS88_20880 IPR036249 Thioredoxin-like superfamily LOS88_20880 IPR013766 Thioredoxin domain LOS88_20880 IPR002065 Thiol peroxidase Tpx LOS88_20885 IPR017969 Heavy-metal-associated, conserved site LOS88_20885 IPR023299 P-type ATPase, cytoplasmic domain N LOS88_20885 IPR018303 P-type ATPase, phosphorylation site LOS88_20885 IPR023214 HAD superfamily LOS88_20885 IPR008250 P-type ATPase, A domain superfamily LOS88_20885 IPR023298 P-type ATPase, transmembrane domain superfamily LOS88_20885 IPR006121 Heavy metal-associated domain, HMA LOS88_20885 IPR036163 Heavy metal-associated domain superfamily LOS88_20885 IPR036412 HAD-like superfamily LOS88_20885 IPR001757 P-type ATPase LOS88_20885 IPR027256 P-type ATPase, subfamily IB LOS88_20890 IPR017853 Glycoside hydrolase superfamily LOS88_20890 IPR040671 Pullulanase, N2 domain LOS88_20890 IPR041111 Pullulanase, Ins domain LOS88_20890 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal LOS88_20890 IPR011839 Alpha-1,6-glucosidases, pullulanase-type LOS88_20890 IPR014756 Immunoglobulin E-set LOS88_20890 IPR013784 Carbohydrate-binding-like fold LOS88_20890 IPR005323 Pullulanase, carbohydrate-binding module 41 LOS88_20890 IPR004193 Glycoside hydrolase, family 13, N-terminal LOS88_20890 IPR013783 Immunoglobulin-like fold LOS88_20890 IPR013780 Glycosyl hydrolase, all-beta LOS88_20890 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_20895 IPR025668 Transposase DDE domain LOS88_20915 IPR003735 Metal-sensitive transcriptional repressor LOS88_20915 IPR038390 Metal-sensitive transcriptional repressor superfamily LOS88_20920 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_20920 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_20920 IPR004839 Aminotransferase, class I/classII LOS88_20920 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_20920 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LOS88_20920 IPR000796 Aspartate/other aminotransferase LOS88_20925 IPR005119 LysR, substrate-binding LOS88_20925 IPR037416 Nodulation protein D, PBP2 LOS88_20925 IPR000847 Transcription regulator HTH, LysR LOS88_20925 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_20925 IPR036390 Winged helix DNA-binding domain superfamily LOS88_20935 IPR001989 Radical-activating enzyme, conserved site LOS88_20935 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW LOS88_20935 IPR012839 Organic radical enzyme activase LOS88_20935 IPR013785 Aldolase-type TIM barrel LOS88_20935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_20935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_20935 IPR034457 Organic radical-activating enzymes LOS88_20935 IPR007197 Radical SAM LOS88_20940 IPR016905 Glycyl radical enzyme, HI0521, predicted LOS88_20965 IPR017938 Riboflavin synthase-like beta-barrel LOS88_20965 IPR001433 Oxidoreductase FAD/NAD(P)-binding LOS88_20965 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_20965 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LOS88_20965 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_20965 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LOS88_20965 IPR012675 Beta-grasp domain superfamily LOS88_20965 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LOS88_20965 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LOS88_20965 IPR036010 2Fe-2S ferredoxin-like superfamily LOS88_20980 IPR001173 Glycosyltransferase 2-like LOS88_20980 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_20980 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA LOS88_20985 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LOS88_20985 IPR002509 NodB homology domain LOS88_20985 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB LOS88_20985 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal LOS88_21000 IPR003660 HAMP domain LOS88_21000 IPR004090 Chemotaxis methyl-accepting receptor LOS88_21000 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_21000 IPR033480 Single Cache domain 2 LOS88_21005 IPR020879 N-acetylglucosamine-binding protein A LOS88_21005 IPR014756 Immunoglobulin E-set LOS88_21005 IPR041029 N-acetylglucosamine binding protein A domain 2 LOS88_21005 IPR004302 Cellulose/chitin-binding protein, N-terminal LOS88_21010 IPR018313 Solute-binding protein family 3, conserved site LOS88_21010 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_21010 IPR001320 Ionotropic glutamate receptor LOS88_21015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21015 IPR003593 AAA+ ATPase domain LOS88_21015 IPR003439 ABC transporter-like LOS88_21015 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LOS88_21015 IPR017871 ABC transporter, conserved site LOS88_21020 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_21020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_21020 IPR035906 MetI-like superfamily LOS88_21025 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_21025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_21025 IPR035906 MetI-like superfamily LOS88_21035 IPR036390 Winged helix DNA-binding domain superfamily LOS88_21035 IPR005119 LysR, substrate-binding LOS88_21035 IPR000847 Transcription regulator HTH, LysR LOS88_21035 IPR037408 HTH-type transcriptional regulator cbl, PBP2 domain LOS88_21035 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_21040 IPR003593 AAA+ ATPase domain LOS88_21040 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal LOS88_21040 IPR003439 ABC transporter-like LOS88_21040 IPR017871 ABC transporter, conserved site LOS88_21040 IPR008995 Molybdate/tungstate binding, C-terminal LOS88_21040 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21040 IPR005666 Sulphate transport system permease protein 1 LOS88_21040 IPR024765 TOBE-like domain LOS88_21045 IPR011866 Sulphate ABC transporter, permease protein CysW LOS88_21045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_21045 IPR035906 MetI-like superfamily LOS88_21045 IPR005667 Sulphate ABC transporter permease protein 2 LOS88_21050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_21050 IPR005667 Sulphate ABC transporter permease protein 2 LOS88_21050 IPR035906 MetI-like superfamily LOS88_21050 IPR011865 Sulphate ABC transporter, permease protein CysT LOS88_21060 IPR000957 Sulphate/thiosulphate-binding, conserved site LOS88_21060 IPR005669 Thiosulphate/Sulfate-binding protein LOS88_21060 IPR034408 Sulphate/thiosulphate-binding site LOS88_21070 IPR032806 H repeat-associated protein, N-terminal LOS88_21070 IPR002559 Transposase, IS4-like LOS88_21080 IPR018357 Hexapeptide transferase, conserved site LOS88_21080 IPR024688 Maltose/galactoside acetyltransferase LOS88_21080 IPR011004 Trimeric LpxA-like superfamily LOS88_21080 IPR001451 Hexapeptide repeat LOS88_21100 IPR015797 NUDIX hydrolase-like domain superfamily LOS88_21100 IPR020084 NUDIX hydrolase, conserved site LOS88_21100 IPR000086 NUDIX hydrolase domain LOS88_21105 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ LOS88_21105 IPR020583 Inositol monophosphatase, metal-binding site LOS88_21105 IPR000760 Inositol monophosphatase-like LOS88_21105 IPR020550 Inositol monophosphatase, conserved site LOS88_21110 IPR018227 Amino acid/polyamine transporter 2 LOS88_21110 IPR004694 Hydroxy amino acid transporter LOS88_21115 IPR002547 tRNA-binding domain LOS88_21115 IPR008231 Probable chaperone CsaA LOS88_21115 IPR012340 Nucleic acid-binding, OB-fold LOS88_21120 IPR003313 AraC-type arabinose-binding/dimerisation domain LOS88_21120 IPR009057 Homeobox-like domain superfamily LOS88_21120 IPR018060 DNA binding HTH domain, AraC-type LOS88_21120 IPR018062 HTH domain AraC-type, conserved site LOS88_21120 IPR014710 RmlC-like jelly roll fold LOS88_21120 IPR011051 RmlC-like cupin domain superfamily LOS88_21120 IPR023699 Transcription activator HTH, RhaR LOS88_21120 IPR020449 Transcription regulator HTH, AraC- type LOS88_21125 IPR023453 Methionine repressor MetJ domain superfamily LOS88_21125 IPR002084 Methionine repressor MetJ LOS88_21125 IPR010985 Ribbon-helix-helix LOS88_21130 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_21130 IPR011821 O-succinylhomoserine (thiol)-lyase LOS88_21130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_21130 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LOS88_21130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_21135 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding LOS88_21135 IPR036393 Acetylglutamate kinase-like superfamily LOS88_21135 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain LOS88_21135 IPR019811 Homoserine dehydrogenase, conserved site LOS88_21135 IPR036291 NAD(P)-binding domain superfamily LOS88_21135 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I LOS88_21135 IPR018042 Aspartate kinase, conserved site LOS88_21135 IPR001341 Aspartate kinase LOS88_21135 IPR001342 Homoserine dehydrogenase, catalytic LOS88_21135 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_21140 IPR001204 Phosphate transporter LOS88_21145 IPR002727 Protein of unknown function DUF47 LOS88_21145 IPR038078 PhoU-like domain superfamily LOS88_21145 IPR018445 Putative phosphate transport regulator LOS88_21155 IPR013785 Aldolase-type TIM barrel LOS88_21155 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA LOS88_21155 IPR002220 DapA-like LOS88_21155 IPR020625 Schiff base-forming aldolase, active site LOS88_21155 IPR020624 Schiff base-forming aldolase, conserved site LOS88_21160 IPR007848 Methyltransferase small domain LOS88_21160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_21160 IPR013675 Methyltransferase small, N-terminal LOS88_21160 IPR023543 rRNA small subunit methyltransferase C LOS88_21160 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_21165 IPR011004 Trimeric LpxA-like superfamily LOS88_21165 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_21165 IPR005836 ADP-glucose pyrophosphorylase, conserved site LOS88_21165 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial LOS88_21165 IPR011831 Glucose-1-phosphate adenylyltransferase LOS88_21165 IPR005835 Nucleotidyl transferase domain LOS88_21170 IPR001296 Glycosyl transferase, family 1 LOS88_21170 IPR011835 Bacterial/plant glycogen synthase LOS88_21170 IPR013534 Starch synthase, catalytic domain LOS88_21210 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LOS88_21210 IPR004770 Na+/H+ antiporter NhaC LOS88_21215 IPR000361 FeS cluster biogenesis LOS88_21215 IPR016092 FeS cluster insertion protein LOS88_21215 IPR017870 FeS cluster insertion, C-terminal, conserved site LOS88_21215 IPR023063 FeS cluster insertion protein ErpA LOS88_21215 IPR035903 HesB-like domain superfamily LOS88_21225 IPR023861 Chloride channel, ClcA LOS88_21225 IPR014743 Chloride channel, core LOS88_21225 IPR001807 Chloride channel, voltage gated LOS88_21230 IPR005814 Aminotransferase class-III LOS88_21230 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_21230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_21230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_21230 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase LOS88_21245 IPR023171 Na/H antiporter domain superfamily LOS88_21245 IPR012336 Thioredoxin-like fold LOS88_21245 IPR004670 Na+/H+ antiporter NhaA LOS88_21245 IPR013766 Thioredoxin domain LOS88_21245 IPR036249 Thioredoxin-like superfamily LOS88_21270 IPR009057 Homeobox-like domain superfamily LOS88_21270 IPR012337 Ribonuclease H-like superfamily LOS88_21270 IPR001584 Integrase, catalytic core LOS88_21270 IPR001598 Transposase, IS30, conserved site LOS88_21270 IPR036397 Ribonuclease H superfamily LOS88_21280 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21280 IPR000330 SNF2-related, N-terminal domain LOS88_21280 IPR040765 RapA, N-terminal Tudor like domain 1 LOS88_21280 IPR040766 RapA, N-terminal Tudor-like domain 2 LOS88_21280 IPR038718 SNF2-like, N-terminal domain superfamily LOS88_21280 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_21280 IPR001650 Helicase, C-terminal LOS88_21280 IPR023949 RNA polymerase-associated protein RapA LOS88_21280 IPR022737 RNA polymerase recycling, bacterial, C-terminal LOS88_21285 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_21285 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LOS88_21285 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_21285 IPR006225 Pseudouridine synthase, RluC/RluD LOS88_21295 IPR011004 Trimeric LpxA-like superfamily LOS88_21295 IPR024688 Maltose/galactoside acetyltransferase LOS88_21295 IPR018357 Hexapeptide transferase, conserved site LOS88_21295 IPR001451 Hexapeptide repeat LOS88_21300 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LOS88_21300 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LOS88_21300 IPR013780 Glycosyl hydrolase, all-beta LOS88_21300 IPR017853 Glycoside hydrolase superfamily LOS88_21300 IPR012769 Trehalose-6-phosphate hydrolase LOS88_21305 IPR036878 Glucose permease domain IIB LOS88_21305 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LOS88_21305 IPR003352 Phosphotransferase system, EIIC LOS88_21305 IPR013013 Phosphotransferase system, EIIC component, type 1 LOS88_21305 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LOS88_21305 IPR011296 Phosphotransferase system, trehalose-specific IIBC component LOS88_21305 IPR001996 Phosphotransferase system, IIB component, type 1 LOS88_21310 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_21310 IPR000843 LacI-type HTH domain LOS88_21310 IPR012771 Trehalose operon repressor LOS88_21310 IPR028082 Periplasmic binding protein-like I LOS88_21325 IPR037152 L-asparaginase, N-terminal domain superfamily LOS88_21325 IPR006034 Asparaginase/glutaminase-like LOS88_21325 IPR027473 L-asparaginase, C-terminal LOS88_21325 IPR040919 Asparaginase/glutaminase, C-terminal LOS88_21325 IPR027475 Asparaginase/glutaminase, active site 2 LOS88_21325 IPR004550 L-asparaginase, type II LOS88_21325 IPR027474 L-asparaginase, N-terminal LOS88_21325 IPR020827 Asparaginase/glutaminase, active site 1 LOS88_21325 IPR036152 Asparaginase/glutaminase-like superfamily LOS88_21330 IPR005170 Transporter-associated domain LOS88_21330 IPR000644 CBS domain LOS88_21330 IPR002550 CNNM, transmembrane domain LOS88_21330 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_21330 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_21335 IPR032816 SNARE associated Golgi protein LOS88_21335 IPR032818 DedA family LOS88_21340 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LOS88_21340 IPR012338 Beta-lactamase/transpeptidase-like LOS88_21340 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LOS88_21375 IPR003751 Translational regulator CsrA LOS88_21375 IPR036107 Carbon storage regulator superfamily LOS88_21380 IPR005260 Aspartate kinase, monofunctional class LOS88_21380 IPR001341 Aspartate kinase LOS88_21380 IPR018042 Aspartate kinase, conserved site LOS88_21380 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_21380 IPR027795 CASTOR, ACT domain LOS88_21380 IPR036393 Acetylglutamate kinase-like superfamily LOS88_21380 IPR002912 ACT domain LOS88_21380 IPR041740 Aspartokinase catalytic domain LOS88_21385 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain LOS88_21385 IPR003156 DHHA1 domain LOS88_21385 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LOS88_21385 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_21385 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LOS88_21385 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria LOS88_21385 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal LOS88_21385 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily LOS88_21385 IPR002318 Alanine-tRNA ligase, class IIc LOS88_21390 IPR003783 Regulatory protein RecX LOS88_21390 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_21395 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface LOS88_21395 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain LOS88_21395 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21395 IPR020584 DNA recombination/repair protein RecA, conserved site LOS88_21395 IPR013765 DNA recombination and repair protein RecA LOS88_21395 IPR023400 DNA recombination and repair protein RecA, C-terminal LOS88_21395 IPR003593 AAA+ ATPase domain LOS88_21400 IPR036653 CinA-like, C-terminal LOS88_21400 IPR008136 CinA, C-terminal LOS88_21410 IPR019080 YqaJ viral recombinase LOS88_21410 IPR011335 Restriction endonuclease type II-like LOS88_21410 IPR017482 Putative phage-type endonuclease LOS88_21410 IPR011604 Exonuclease, phage-type/RecB, C-terminal LOS88_21430 IPR037518 MPN domain LOS88_21430 IPR025657 RadC-like JAB domain LOS88_21430 IPR010994 RuvA domain 2-like LOS88_21430 IPR001405 Uncharacterised protein family UPF0758 LOS88_21430 IPR020891 Uncharacterised protein family UPF0758, conserved site LOS88_21470 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21470 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_21470 IPR001650 Helicase, C-terminal LOS88_21470 IPR038718 SNF2-like, N-terminal domain superfamily LOS88_21470 IPR000330 SNF2-related, N-terminal domain LOS88_21500 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_21500 IPR013762 Integrase-like, catalytic domain superfamily LOS88_21500 IPR002104 Integrase, catalytic domain LOS88_21500 IPR038488 Integrase, DNA-binding domain superfamily LOS88_21500 IPR025166 Integrase, DNA-binding domain LOS88_21500 IPR010998 Integrase/recombinase, N-terminal LOS88_21505 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21505 IPR036678 MutS, connector domain superfamily LOS88_21505 IPR007860 DNA mismatch repair protein MutS, connector domain LOS88_21505 IPR036187 DNA mismatch repair protein MutS, core domain superfamily LOS88_21505 IPR016151 DNA mismatch repair protein MutS, N-terminal LOS88_21505 IPR007696 DNA mismatch repair protein MutS, core LOS88_21505 IPR000432 DNA mismatch repair protein MutS, C-terminal LOS88_21505 IPR017261 DNA mismatch repair protein MutS/MSH LOS88_21505 IPR007695 DNA mismatch repair protein MutS-like, N-terminal LOS88_21505 IPR005748 DNA mismatch repair protein MutS LOS88_21505 IPR007861 DNA mismatch repair protein MutS, clamp LOS88_21510 IPR002641 Patatin-like phospholipase domain LOS88_21510 IPR037483 YjjU-like LOS88_21510 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LOS88_21520 IPR005261 Conserved hypothetical protein CHP00659 LOS88_21520 IPR007300 CidB/LrgB family LOS88_21525 IPR023760 Holin-like protein CidA LOS88_21525 IPR005538 LrgA/CidA family LOS88_21530 IPR036390 Winged helix DNA-binding domain superfamily LOS88_21530 IPR000847 Transcription regulator HTH, LysR LOS88_21530 IPR005119 LysR, substrate-binding LOS88_21530 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_21540 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LOS88_21540 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily LOS88_21540 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain LOS88_21560 IPR036515 Transposase IS200-like superfamily LOS88_21560 IPR002686 Transposase IS200-like LOS88_21565 IPR012726 Thiazole biosynthesis ThiH LOS88_21565 IPR007197 Radical SAM LOS88_21565 IPR010722 Biotin and thiamin synthesis-associated domain LOS88_21565 IPR013785 Aldolase-type TIM barrel LOS88_21565 IPR034428 ThiH/NocL/HydG-like LOS88_21570 IPR008867 Thiazole synthase LOS88_21570 IPR033983 Thiazole synthase ThiG LOS88_21570 IPR013785 Aldolase-type TIM barrel LOS88_21580 IPR000594 THIF-type NAD/FAD binding fold LOS88_21580 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF LOS88_21580 IPR035985 Ubiquitin-activating enzyme LOS88_21585 IPR013785 Aldolase-type TIM barrel LOS88_21585 IPR022998 Thiamine phosphate synthase/TenI LOS88_21585 IPR034291 Thiamine phosphate synthase LOS88_21585 IPR036206 Thiamin phosphate synthase superfamily LOS88_21590 IPR037509 Phosphomethylpyrimidine synthase LOS88_21590 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B LOS88_21590 IPR038521 ThiC/Bza superfamily LOS88_21590 IPR025747 ThiC-associated domain LOS88_21600 IPR032806 H repeat-associated protein, N-terminal LOS88_21600 IPR002559 Transposase, IS4-like LOS88_21605 IPR001598 Transposase, IS30, conserved site LOS88_21605 IPR036397 Ribonuclease H superfamily LOS88_21605 IPR012337 Ribonuclease H-like superfamily LOS88_21605 IPR001584 Integrase, catalytic core LOS88_21605 IPR009057 Homeobox-like domain superfamily LOS88_21610 IPR002559 Transposase, IS4-like LOS88_21610 IPR032806 H repeat-associated protein, N-terminal LOS88_21615 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria LOS88_21615 IPR038477 Arylsulfotransferase, N-terminal domain superfamily LOS88_21615 IPR035391 Arylsulfotransferase, Ig-like domain LOS88_21615 IPR010262 Arylsulfotransferase, bacteria LOS88_21635 IPR039420 Transcriptional regulatory protein WalR-like LOS88_21635 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_21635 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_21635 IPR001789 Signal transduction response regulator, receiver domain LOS88_21635 IPR011006 CheY-like superfamily LOS88_21640 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_21640 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_21640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_21640 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_21640 IPR005467 Histidine kinase domain LOS88_21645 IPR011761 ATP-grasp fold LOS88_21645 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX LOS88_21645 IPR041107 RimK, PreATP-grasp domain LOS88_21645 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK LOS88_21645 IPR013815 ATP-grasp fold, subdomain 1 LOS88_21645 IPR013651 ATP-grasp fold, RimK-type LOS88_21650 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily LOS88_21650 IPR036589 Homocysteine-binding domain superfamily LOS88_21650 IPR000489 Pterin-binding domain LOS88_21650 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LOS88_21650 IPR006158 Cobalamin (vitamin B12)-binding domain LOS88_21650 IPR004223 Vitamin B12-dependent methionine synthase, activation domain LOS88_21650 IPR011005 Dihydropteroate synthase-like LOS88_21650 IPR003726 Homocysteine-binding domain LOS88_21650 IPR033706 Methionine synthase, B12-binding domain LOS88_21650 IPR036724 Cobalamin-binding domain superfamily LOS88_21650 IPR036594 Methionine synthase domain LOS88_21650 IPR011822 Cobalamin-dependent methionine synthase LOS88_21655 IPR038770 Sodium/solute symporter superfamily LOS88_21655 IPR006153 Cation/H+ exchanger LOS88_21655 IPR018422 Cation/H+ exchanger, CPA1 family LOS88_21680 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA LOS88_21680 IPR036412 HAD-like superfamily LOS88_21680 IPR005519 Acid phosphatase, class B-like LOS88_21680 IPR023214 HAD superfamily LOS88_21690 IPR011701 Major facilitator superfamily LOS88_21690 IPR020846 Major facilitator superfamily domain LOS88_21690 IPR036259 MFS transporter superfamily LOS88_21690 IPR005829 Sugar transporter, conserved site LOS88_21695 IPR002771 Multiple antibiotic resistance (MarC)-related LOS88_21705 IPR036059 Metalloprotease TldD/PmbA superfamily LOS88_21705 IPR025502 TldD LOS88_21705 IPR035068 Metalloprotease TldD/PmbA, N-terminal LOS88_21705 IPR002510 Metalloprotease TldD/PmbA LOS88_21710 IPR003010 Carbon-nitrogen hydrolase LOS88_21710 IPR036526 Carbon-nitrogen hydrolase superfamily LOS88_21710 IPR001110 Uncharacterised protein family UPF0012, conserved site LOS88_21725 IPR011836 Conserved hypothetical protein CHP02099 LOS88_21725 IPR025263 Domain of unknown function DUF3971 LOS88_21725 IPR032712 AsmA-like, C-terminal LOS88_21730 IPR012340 Nucleic acid-binding, OB-fold LOS88_21730 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G LOS88_21730 IPR004659 Ribonuclease E/G LOS88_21730 IPR022967 RNA-binding domain, S1 LOS88_21730 IPR003029 S1 domain LOS88_21735 IPR029001 Inosine triphosphate pyrophosphatase-like LOS88_21735 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein LOS88_21740 IPR026034 Cell shape-determining protein MreD, proteobacterial type LOS88_21740 IPR007227 Cell shape-determining protein MreD LOS88_21745 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 LOS88_21745 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 LOS88_21745 IPR007221 Rod shape-determining protein MreC LOS88_21750 IPR004753 Cell shape determining protein MreB LOS88_21775 IPR012902 Prokaryotic N-terminal methylation site LOS88_21775 IPR028188 Type IV pilin PilA LOS88_21780 IPR000983 Bacterial general secretion pathway protein G-type pilin LOS88_21780 IPR012902 Prokaryotic N-terminal methylation site LOS88_21780 IPR001082 Fimbrial protein pilin LOS88_21795 IPR042094 Type II secretion system F domain superfamily LOS88_21795 IPR018076 Type II secretion system F domain LOS88_21795 IPR001992 Type II secretion system conserved site LOS88_21795 IPR003004 GspF/PilC family LOS88_21800 IPR042181 Type II secretion system, protein E, N-terminal LOS88_21800 IPR007831 General secretory system II, protein E, N-terminal LOS88_21800 IPR013374 ATPase, type IV, pilus assembly, PilB LOS88_21800 IPR001482 Type II/IV secretion system protein LOS88_21800 IPR003593 AAA+ ATPase domain LOS88_21800 IPR037257 General secretory system II, protein E, N-terminal superfamily LOS88_21800 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21810 IPR003593 AAA+ ATPase domain LOS88_21810 IPR036733 B transposition protein, C-terminal domain superfamily LOS88_21810 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_21810 IPR009084 B transposition protein, C-terminal LOS88_21810 IPR001387 Cro/C1-type helix-turn-helix domain LOS88_21810 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21815 IPR001775 GspD/PilQ family LOS88_21815 IPR005644 NolW-like LOS88_21815 IPR038591 NolW-like superfamily LOS88_21815 IPR004846 Type II/III secretion system LOS88_21815 IPR013356 Type II secretion system GspD LOS88_21815 IPR004845 Type II secretion system GspD, conserved site LOS88_21845 IPR029787 Nucleotide cyclase LOS88_21845 IPR000160 GGDEF domain LOS88_21845 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 LOS88_21845 IPR001633 EAL domain LOS88_21845 IPR035919 EAL domain superfamily LOS88_21850 IPR001633 EAL domain LOS88_21850 IPR035919 EAL domain superfamily LOS88_21850 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LOS88_21855 IPR004713 Calcium/proton exchanger LOS88_21855 IPR004837 Sodium/calcium exchanger membrane region LOS88_21860 IPR022313 Phenylalanine/histidine ammonia-lyases, active site LOS88_21860 IPR008948 L-Aspartase-like LOS88_21860 IPR024083 Fumarase/histidase, N-terminal LOS88_21860 IPR001106 Aromatic amino acid lyase LOS88_21860 IPR005921 Histidine ammonia-lyase LOS88_21865 IPR023637 Urocanase LOS88_21865 IPR035401 Urocanase, C-terminal domain LOS88_21865 IPR038364 Urocanase, central domain superfamily LOS88_21865 IPR023636 Urocanase conserved site LOS88_21865 IPR035400 Urocanase, N-terminal domain LOS88_21865 IPR035085 Urocanase, Rossmann-like domain LOS88_21865 IPR036190 Urocanase superfamily LOS88_21870 IPR005923 Formiminoglutamase LOS88_21870 IPR006035 Ureohydrolase LOS88_21870 IPR023696 Ureohydrolase domain superfamily LOS88_21870 IPR020855 Ureohydrolase, manganese-binding site LOS88_21875 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_21875 IPR032466 Metal-dependent hydrolase LOS88_21875 IPR006680 Amidohydrolase-related LOS88_21875 IPR005920 Imidazolonepropionase LOS88_21880 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LOS88_21880 IPR010248 Histidine utilization repressor LOS88_21880 IPR000524 Transcription regulator HTH, GntR LOS88_21880 IPR011663 UbiC transcription regulator-associated LOS88_21880 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_21880 IPR036390 Winged helix DNA-binding domain superfamily LOS88_21885 IPR001765 Carbonic anhydrase LOS88_21885 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site LOS88_21885 IPR036874 Carbonic anhydrase superfamily LOS88_21890 IPR013324 RNA polymerase sigma factor, region 3/4-like LOS88_21890 IPR013325 RNA polymerase sigma factor, region 2 LOS88_21890 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_21890 IPR007630 RNA polymerase sigma-70 region 4 LOS88_21890 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria LOS88_21890 IPR007627 RNA polymerase sigma-70 region 2 LOS88_21890 IPR009042 RNA polymerase sigma-70 region 1.2 LOS88_21890 IPR014284 RNA polymerase sigma-70 like domain LOS88_21890 IPR000943 RNA polymerase sigma-70 LOS88_21895 IPR004513 Cell division protein FtsX LOS88_21895 IPR040690 FtsX, extracellular domain LOS88_21900 IPR003593 AAA+ ATPase domain LOS88_21900 IPR003439 ABC transporter-like LOS88_21900 IPR017871 ABC transporter, conserved site LOS88_21900 IPR005286 Cell division protein FtsE, ATP-binding LOS88_21900 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21905 IPR004390 Signal-recognition particle receptor FtsY LOS88_21905 IPR013822 Signal recognition particle SRP54, helical bundle LOS88_21905 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_21905 IPR036225 SRP/SRP receptor, N-terminal LOS88_21905 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily LOS88_21905 IPR003593 AAA+ ATPase domain LOS88_21905 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LOS88_21910 IPR004398 RNA methyltransferase, RsmD LOS88_21910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_21910 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_21930 IPR003148 Regulator of K+ conductance, N-terminal LOS88_21930 IPR006153 Cation/H+ exchanger LOS88_21930 IPR004771 K+/H+ exchanger LOS88_21930 IPR020884 Glutathione-regulated potassium-efflux system protein KefB LOS88_21930 IPR038770 Sodium/solute symporter superfamily LOS88_21930 IPR036291 NAD(P)-binding domain superfamily LOS88_21935 IPR003680 Flavodoxin-like fold LOS88_21935 IPR029039 Flavoprotein-like superfamily LOS88_21935 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG LOS88_21940 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_21940 IPR000847 Transcription regulator HTH, LysR LOS88_21940 IPR036390 Winged helix DNA-binding domain superfamily LOS88_21940 IPR005119 LysR, substrate-binding LOS88_21945 IPR036291 NAD(P)-binding domain superfamily LOS88_21945 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_21945 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_21960 IPR002471 Peptidase S9, serine active site LOS88_21960 IPR023302 Peptidase S9A, N-terminal domain LOS88_21960 IPR002470 Peptidase S9A, prolyl oligopeptidase LOS88_21960 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain LOS88_21960 IPR029058 Alpha/Beta hydrolase fold LOS88_21985 IPR023703 Membrane-bound lytic murein transglycosylase F LOS88_21985 IPR023346 Lysozyme-like domain superfamily LOS88_21985 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_21985 IPR008258 Transglycosylase SLT domain 1 LOS88_21985 IPR000189 Prokaryotic transglycosylase, active site LOS88_21995 IPR006312 Sec-independent protein translocase protein TatA/E LOS88_21995 IPR003369 Sec-independent protein translocase protein TatA/B/E LOS88_22000 IPR000847 Transcription regulator HTH, LysR LOS88_22000 IPR023746 Transcription regulator HTH, YidZ LOS88_22000 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22000 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain LOS88_22000 IPR005119 LysR, substrate-binding LOS88_22000 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22005 IPR002771 Multiple antibiotic resistance (MarC)-related LOS88_22010 IPR019620 Putative metal-binding protein LOS88_22015 IPR036458 Sodium:dicarboxylate symporter superfamily LOS88_22015 IPR018107 Sodium:dicarboxylate symporter, conserved site LOS88_22015 IPR001991 Sodium:dicarboxylate symporter LOS88_22015 IPR033380 Glutamate-aspartate symport protein GltP/GltT LOS88_22025 IPR000847 Transcription regulator HTH, LysR LOS88_22025 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22025 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22025 IPR005119 LysR, substrate-binding LOS88_22030 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LOS88_22035 IPR004638 Drug resistance transporter EmrB-like LOS88_22035 IPR011701 Major facilitator superfamily LOS88_22035 IPR020846 Major facilitator superfamily domain LOS88_22035 IPR036259 MFS transporter superfamily LOS88_22040 IPR012506 YhhN-like LOS88_22055 IPR023764 Transcriptional repressor HTH, FabR LOS88_22055 IPR001647 DNA-binding HTH domain, TetR-type LOS88_22055 IPR009057 Homeobox-like domain superfamily LOS88_22100 IPR036412 HAD-like superfamily LOS88_22100 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LOS88_22100 IPR023214 HAD superfamily LOS88_22100 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase LOS88_22100 IPR006543 Histidinol-phosphate phosphatase LOS88_22105 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle LOS88_22105 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LOS88_22105 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_22105 IPR000795 Transcription factor, GTP-binding domain LOS88_22105 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LOS88_22105 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22105 IPR005225 Small GTP-binding protein domain LOS88_22105 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain LOS88_22105 IPR031157 Tr-type G domain, conserved site LOS88_22105 IPR033720 Elongation factor Tu, domain 2 LOS88_22105 IPR004161 Translation elongation factor EFTu-like, domain 2 LOS88_22110 IPR041095 Elongation Factor G, domain II LOS88_22110 IPR009022 Elongation factor G, domain III LOS88_22110 IPR035647 EF-G domain III/V-like LOS88_22110 IPR035649 EFG, domain V LOS88_22110 IPR000640 Elongation factor EFG, domain V-like LOS88_22110 IPR031157 Tr-type G domain, conserved site LOS88_22110 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22110 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_22110 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_22110 IPR000795 Transcription factor, GTP-binding domain LOS88_22110 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_22110 IPR004540 Translation elongation factor EFG/EF2 LOS88_22110 IPR005517 Translation elongation factor EFG/EF2, domain IV LOS88_22110 IPR004161 Translation elongation factor EFTu-like, domain 2 LOS88_22110 IPR005225 Small GTP-binding protein domain LOS88_22115 IPR000235 Ribosomal protein S5/S7 LOS88_22115 IPR005717 Ribosomal protein S7, bacterial/organellar-type LOS88_22115 IPR020606 Ribosomal protein S7, conserved site LOS88_22115 IPR023798 Ribosomal protein S7 domain LOS88_22115 IPR036823 Ribosomal protein S7 domain superfamily LOS88_22120 IPR005679 Ribosomal protein S12, bacterial-type LOS88_22120 IPR012340 Nucleic acid-binding, OB-fold LOS88_22120 IPR006032 Ribosomal protein S12/S23 LOS88_22125 IPR007215 Sulphur relay, TusB/DsrH LOS88_22125 IPR027396 DsrEFH-like LOS88_22125 IPR023526 Sulphur relay, TusB LOS88_22130 IPR027396 DsrEFH-like LOS88_22130 IPR003787 Sulphur relay, DsrE/F-like protein LOS88_22130 IPR037450 Sulphur relay, TusC LOS88_22130 IPR017462 Sulphur relay, TusC/DsrF LOS88_22135 IPR027396 DsrEFH-like LOS88_22135 IPR003787 Sulphur relay, DsrE/F-like protein LOS88_22135 IPR017463 Sulphur relay, TusD/DsrE LOS88_22140 IPR006056 RidA family LOS88_22140 IPR019897 RidA, conserved site LOS88_22140 IPR006175 YjgF/YER057c/UK114 family LOS88_22140 IPR035959 RutC-like superfamily LOS88_22145 IPR013559 YheO-like LOS88_22145 IPR039445 Transcriptional regulator DauR-like, HTH domain LOS88_22145 IPR039446 Transcriptional regulator DauR-like LOS88_22150 IPR012754 DNA-directed RNA polymerase, subunit beta-prime LOS88_22150 IPR000722 RNA polymerase, alpha subunit LOS88_22150 IPR006592 RNA polymerase, N-terminal LOS88_22150 IPR007080 RNA polymerase Rpb1, domain 1 LOS88_22150 IPR007066 RNA polymerase Rpb1, domain 3 LOS88_22150 IPR042102 RNA polymerase Rpb1, domain 3 superfamily LOS88_22150 IPR007083 RNA polymerase Rpb1, domain 4 LOS88_22150 IPR007081 RNA polymerase Rpb1, domain 5 LOS88_22150 IPR038120 RNA polymerase Rpb1, funnel domain superfamily LOS88_22155 IPR007645 RNA polymerase Rpb2, domain 3 LOS88_22155 IPR007641 RNA polymerase Rpb2, domain 7 LOS88_22155 IPR037034 RNA polymerase Rpb2, domain 2 superfamily LOS88_22155 IPR007642 RNA polymerase Rpb2, domain 2 LOS88_22155 IPR007644 RNA polymerase, beta subunit, protrusion LOS88_22155 IPR007121 RNA polymerase, beta subunit, conserved site LOS88_22155 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain LOS88_22155 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily LOS88_22155 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain LOS88_22155 IPR015712 DNA-directed RNA polymerase, subunit 2 LOS88_22155 IPR014724 RNA polymerase Rpb2, OB-fold LOS88_22155 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily LOS88_22155 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type LOS88_22160 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily LOS88_22160 IPR008932 Ribosomal protein L7/L12, oligomerisation LOS88_22160 IPR013823 Ribosomal protein L7/L12, C-terminal LOS88_22160 IPR000206 Ribosomal protein L7/L12 LOS88_22160 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LOS88_22165 IPR022973 Ribosomal protein L10 LOS88_22165 IPR002363 Ribosomal protein L10, eubacterial, conserved site LOS88_22165 IPR001790 Ribosomal protein L10P LOS88_22170 IPR023673 Ribosomal protein L1, conserved site LOS88_22170 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LOS88_22170 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LOS88_22170 IPR002143 Ribosomal protein L1 LOS88_22170 IPR005878 Ribosomal protein L1, bacterial-type LOS88_22170 IPR023674 Ribosomal protein L1-like LOS88_22175 IPR020785 Ribosomal protein L11, conserved site LOS88_22175 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily LOS88_22175 IPR006519 Ribosomal protein L11, bacterial-type LOS88_22175 IPR020783 Ribosomal protein L11, C-terminal LOS88_22175 IPR036769 Ribosomal protein L11, C-terminal domain superfamily LOS88_22175 IPR020784 Ribosomal protein L11, N-terminal LOS88_22175 IPR000911 Ribosomal protein L11/L12 LOS88_22180 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site LOS88_22180 IPR001062 Transcription antitermination protein, NusG LOS88_22180 IPR014722 Ribosomal protein L2, domain 2 LOS88_22180 IPR036735 NusG, N-terminal domain superfamily LOS88_22180 IPR006645 NusG, N-terminal LOS88_22180 IPR005824 KOW LOS88_22180 IPR008991 Translation protein SH3-like domain superfamily LOS88_22185 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit LOS88_22185 IPR005807 SecE subunit of protein translocation complex, bacterial-like LOS88_22185 IPR038379 SecE superfamily LOS88_22195 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22195 IPR005225 Small GTP-binding protein domain LOS88_22195 IPR000795 Transcription factor, GTP-binding domain LOS88_22195 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_22195 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LOS88_22195 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle LOS88_22195 IPR004161 Translation elongation factor EFTu-like, domain 2 LOS88_22195 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LOS88_22195 IPR033720 Elongation factor Tu, domain 2 LOS88_22195 IPR031157 Tr-type G domain, conserved site LOS88_22195 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain LOS88_22210 IPR006083 Phosphoribulokinase/uridine kinase LOS88_22210 IPR004566 Pantothenate kinase LOS88_22210 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22215 IPR008988 Transcriptional repressor, C-terminal LOS88_22215 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22215 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22215 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LOS88_22215 IPR004409 Biotin operon repressor, helix-turn-helix domain LOS88_22215 IPR004408 Biotin--acetyl-CoA-carboxylase ligase LOS88_22215 IPR030855 Bifunctional ligase/repressor BirA LOS88_22215 IPR013196 Helix-turn-helix, type 11 LOS88_22215 IPR003142 Biotin protein ligase, C-terminal LOS88_22220 IPR036318 FAD-binding, type PCMH-like superfamily LOS88_22220 IPR006094 FAD linked oxidase, N-terminal LOS88_22220 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily LOS88_22220 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal LOS88_22220 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase LOS88_22220 IPR016169 FAD-binding, type PCMH, subdomain 2 LOS88_22220 IPR016167 FAD-binding, type PCMH, subdomain 1 LOS88_22220 IPR016166 FAD-binding domain, PCMH-type LOS88_22225 IPR003148 Regulator of K+ conductance, N-terminal LOS88_22225 IPR006037 Regulator of K+ conductance, C-terminal LOS88_22225 IPR036291 NAD(P)-binding domain superfamily LOS88_22225 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LOS88_22230 IPR003445 Cation transporter LOS88_22230 IPR004772 TrkH potassium transport family LOS88_22235 IPR034144 DNA topoisomerase 3-like, TOPRIM domain LOS88_22235 IPR005738 DNA topoisomerase III LOS88_22235 IPR000380 DNA topoisomerase, type IA LOS88_22235 IPR023405 DNA topoisomerase, type IA, core domain LOS88_22235 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LOS88_22235 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LOS88_22235 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LOS88_22235 IPR013497 DNA topoisomerase, type IA, central LOS88_22235 IPR023406 DNA topoisomerase, type IA, active site LOS88_22235 IPR003601 DNA topoisomerase, type IA, domain 2 LOS88_22235 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LOS88_22235 IPR006171 TOPRIM domain LOS88_22245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_22245 IPR005467 Histidine kinase domain LOS88_22245 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_22245 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_22245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_22245 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_22245 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_22250 IPR011031 Multihaem cytochrome LOS88_22250 IPR036280 Multiheme cytochrome superfamily LOS88_22250 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK LOS88_22250 IPR038266 NapC/NirT cytochrome c superfamily LOS88_22250 IPR005126 NapC/NirT cytochrome c, N-terminal LOS88_22255 IPR009010 Aspartate decarboxylase-like domain superfamily LOS88_22255 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain LOS88_22255 IPR041460 Molybdopterin oxidoreductase, N-terminal LOS88_22255 IPR006657 Molybdopterin dinucleotide-binding domain LOS88_22255 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase LOS88_22255 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site LOS88_22255 IPR006311 Twin-arginine translocation pathway, signal sequence LOS88_22255 IPR006656 Molybdopterin oxidoreductase LOS88_22265 IPR003660 HAMP domain LOS88_22265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_22265 IPR005467 Histidine kinase domain LOS88_22265 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_22265 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_22265 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_22265 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_22270 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22270 IPR039420 Transcriptional regulatory protein WalR-like LOS88_22270 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_22270 IPR011006 CheY-like superfamily LOS88_22270 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_22270 IPR001789 Signal transduction response regulator, receiver domain LOS88_22285 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ LOS88_22285 IPR013130 Ferric reductase transmembrane component-like domain LOS88_22290 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP LOS88_22290 IPR000572 Oxidoreductase, molybdopterin-binding domain LOS88_22290 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily LOS88_22290 IPR006311 Twin-arginine translocation pathway, signal sequence LOS88_22295 IPR009476 Protein of unknown function DUF1097 LOS88_22300 IPR001789 Signal transduction response regulator, receiver domain LOS88_22300 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LOS88_22300 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_22300 IPR025944 Sigma-54 interaction domain, conserved site LOS88_22300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22300 IPR009057 Homeobox-like domain superfamily LOS88_22300 IPR011006 CheY-like superfamily LOS88_22300 IPR003593 AAA+ ATPase domain LOS88_22300 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_22310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_22310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_22310 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_22310 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_22310 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_22310 IPR005467 Histidine kinase domain LOS88_22325 IPR036291 NAD(P)-binding domain superfamily LOS88_22325 IPR020904 Short-chain dehydrogenase/reductase, conserved site LOS88_22325 IPR002347 Short-chain dehydrogenase/reductase SDR LOS88_22330 IPR001093 IMP dehydrogenase/GMP reductase LOS88_22330 IPR015875 IMP dehydrogenase / GMP reductase, conserved site LOS88_22330 IPR005990 Inosine-5'-monophosphate dehydrogenase LOS88_22330 IPR000644 CBS domain LOS88_22330 IPR013785 Aldolase-type TIM barrel LOS88_22335 IPR019275 Protein of unknown function DUF2301 LOS88_22345 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22345 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22345 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LOS88_22345 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LOS88_22345 IPR019888 Transcription regulator AsnC-type LOS88_22345 IPR011991 ArsR-like helix-turn-helix domain LOS88_22345 IPR000485 AsnC-type HTH domain LOS88_22345 IPR011008 Dimeric alpha-beta barrel LOS88_22350 IPR006195 Aminoacyl-tRNA synthetase, class II LOS88_22350 IPR004618 Aspartate--ammonia ligase LOS88_22355 IPR028299 ClpA/B, conserved site 2 LOS88_22355 IPR018368 ClpA/B, conserved site 1 LOS88_22355 IPR001270 ClpA/B family LOS88_22355 IPR004176 Clp, N-terminal LOS88_22355 IPR036628 Clp, N-terminal domain superfamily LOS88_22355 IPR017730 Chaperonin ClpB LOS88_22355 IPR041546 ClpA/ClpB, AAA lid domain LOS88_22355 IPR003959 ATPase, AAA-type, core LOS88_22355 IPR003593 AAA+ ATPase domain LOS88_22355 IPR019489 Clp ATPase, C-terminal LOS88_22355 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22360 IPR003730 Multi-copper polyphenol oxidoreductase LOS88_22360 IPR038371 Multi-copper polyphenol oxidoreductase superfamily LOS88_22360 IPR011324 Cytotoxic necrotizing factor-like, catalytic LOS88_22365 IPR002942 RNA-binding S4 domain LOS88_22365 IPR020103 Pseudouridine synthase, catalytic domain superfamily LOS88_22365 IPR006225 Pseudouridine synthase, RluC/RluD LOS88_22365 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LOS88_22365 IPR006145 Pseudouridine synthase, RsuA/RluA LOS88_22365 IPR036986 RNA-binding S4 domain superfamily LOS88_22370 IPR017689 Outer membrane protein assembly factor BamD LOS88_22370 IPR039565 Outer membrane lipoprotein BamD-like LOS88_22370 IPR011990 Tetratricopeptide-like helical domain superfamily LOS88_22375 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOS88_22375 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_22375 IPR023753 FAD/NAD(P)-binding domain LOS88_22375 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LOS88_22380 IPR036458 Sodium:dicarboxylate symporter superfamily LOS88_22380 IPR001991 Sodium:dicarboxylate symporter LOS88_22385 IPR005130 Serine dehydratase-like, alpha subunit LOS88_22385 IPR021144 Uncharacterised protein family UPF0597 LOS88_22390 IPR013559 YheO-like LOS88_22390 IPR039446 Transcriptional regulator DauR-like LOS88_22390 IPR039445 Transcriptional regulator DauR-like, HTH domain LOS88_22400 IPR029035 DHS-like NAD/FAD-binding domain superfamily LOS88_22400 IPR012136 NADP transhydrogenase, beta subunit LOS88_22400 IPR034300 NADP transhydrogenase beta-like domain LOS88_22405 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal LOS88_22405 IPR026255 NAD(P) transhydrogenase, alpha subunit LOS88_22405 IPR036291 NAD(P)-binding domain superfamily LOS88_22405 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 LOS88_22405 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LOS88_22405 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 LOS88_22405 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LOS88_22410 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LOS88_22410 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LOS88_22415 IPR009057 Homeobox-like domain superfamily LOS88_22415 IPR009594 Transcription regulator HTH, AraC, N-terminal LOS88_22415 IPR018060 DNA binding HTH domain, AraC-type LOS88_22420 IPR022272 Lipocalin family conserved site LOS88_22420 IPR000566 Lipocalin/cytosolic fatty-acid binding domain LOS88_22420 IPR012674 Calycin LOS88_22420 IPR002446 Lipocalin, bacterial LOS88_22420 IPR022271 Lipocalin, ApoD type LOS88_22425 IPR004090 Chemotaxis methyl-accepting receptor LOS88_22425 IPR033479 Double Cache domain 1 LOS88_22425 IPR003660 HAMP domain LOS88_22425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_22425 IPR029151 Periplasmic sensor-like domain superfamily LOS88_22425 IPR000727 Target SNARE coiled-coil homology domain LOS88_22435 IPR005119 LysR, substrate-binding LOS88_22435 IPR000847 Transcription regulator HTH, LysR LOS88_22435 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22435 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22455 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LOS88_22455 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LOS88_22455 IPR006130 Aspartate/ornithine carbamoyltransferase LOS88_22455 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LOS88_22455 IPR002082 Aspartate carbamoyltransferase LOS88_22460 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily LOS88_22460 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily LOS88_22460 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LOS88_22460 IPR002801 Aspartate transcarbamylase regulatory subunit LOS88_22460 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal LOS88_22465 IPR001669 Arginine repressor LOS88_22465 IPR020899 Arginine repressor, C-terminal LOS88_22465 IPR036251 Arginine repressor, C-terminal domain superfamily LOS88_22465 IPR020900 Arginine repressor, DNA-binding domain LOS88_22465 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22465 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22470 IPR018385 C4-dicarboxylate anaerobic carrier-like LOS88_22475 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LOS88_22475 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LOS88_22475 IPR002292 Ornithine/putrescine carbamoyltransferase LOS88_22475 IPR024904 Ornithine carbamoyltransferase LOS88_22475 IPR006130 Aspartate/ornithine carbamoyltransferase LOS88_22475 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LOS88_22480 IPR036393 Acetylglutamate kinase-like superfamily LOS88_22480 IPR001048 Aspartate/glutamate/uridylate kinase LOS88_22480 IPR003964 Carbamate kinase LOS88_22485 IPR003876 Arginine deiminase LOS88_22505 IPR010723 HemN, C-terminal LOS88_22505 IPR023404 Radical SAM, alpha/beta horseshoe LOS88_22505 IPR007197 Radical SAM LOS88_22505 IPR006638 Elp3/MiaB/NifB LOS88_22505 IPR034505 Anaerobic coproporphyrinogen-III oxidase LOS88_22505 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN LOS88_22510 IPR019617 Domain of unknown function DUF2489 LOS88_22515 IPR007336 Der GTPase activator LOS88_22520 IPR036909 Cytochrome c-like domain superfamily LOS88_22520 IPR024167 Cytochrome c4-like LOS88_22520 IPR009056 Cytochrome c-like domain LOS88_22525 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22525 IPR030393 EngB-type guanine nucleotide-binding (G) domain LOS88_22525 IPR006073 GTP binding domain LOS88_22525 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC LOS88_22535 IPR036291 NAD(P)-binding domain superfamily LOS88_22535 IPR022893 Shikimate dehydrogenase family LOS88_22535 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LOS88_22535 IPR011342 Shikimate dehydrogenase LOS88_22535 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal LOS88_22535 IPR041121 SDH, C-terminal LOS88_22540 IPR001260 Coproporphyrinogen III oxidase, aerobic LOS88_22540 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily LOS88_22540 IPR018375 Coproporphyrinogen III oxidase, conserved site LOS88_22545 IPR006070 YrdC-like domain LOS88_22545 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LOS88_22545 IPR023535 Threonylcarbamoyl-AMP synthase LOS88_22550 IPR033747 Class I PurE LOS88_22550 IPR024694 PurE, prokaryotic type LOS88_22550 IPR035893 PurE domain superfamily LOS88_22550 IPR000031 PurE domain LOS88_22555 IPR000380 DNA topoisomerase, type IA LOS88_22555 IPR013498 DNA topoisomerase, type IA, zn finger LOS88_22560 IPR007456 Smg LOS88_22565 IPR041614 DprA, winged helix domain LOS88_22565 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22565 IPR003488 DNA recombination-mediator protein A LOS88_22570 IPR018392 LysM domain LOS88_22570 IPR036779 LysM domain superfamily LOS88_22575 IPR023635 Peptide deformylase LOS88_22575 IPR036821 Peptide deformylase superfamily LOS88_22580 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain LOS88_22580 IPR005794 Methionyl-tRNA formyltransferase LOS88_22580 IPR005793 Formyl transferase, C-terminal LOS88_22580 IPR037022 Formyl transferase, C-terminal domain superfamily LOS88_22580 IPR002376 Formyl transferase, N-terminal LOS88_22580 IPR036477 Formyl transferase, N-terminal domain superfamily LOS88_22580 IPR011034 Formyl transferase-like, C-terminal domain superfamily LOS88_22580 IPR001555 Phosphoribosylglycinamide formyltransferase, active site LOS88_22585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_22585 IPR004573 rRNA small subunit methyltransferase B LOS88_22585 IPR023267 RNA (C5-cytosine) methyltransferase LOS88_22585 IPR006027 NusB/RsmB/TIM44 LOS88_22585 IPR035926 NusB-like superfamily LOS88_22585 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type LOS88_22585 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site LOS88_22590 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LOS88_22590 IPR006036 Potassium uptake protein TrkA LOS88_22590 IPR036291 NAD(P)-binding domain superfamily LOS88_22590 IPR006037 Regulator of K+ conductance, C-terminal LOS88_22590 IPR003148 Regulator of K+ conductance, N-terminal LOS88_22595 IPR003445 Cation transporter LOS88_22595 IPR004772 TrkH potassium transport family LOS88_22600 IPR042116 GTP-binding protein TypA/BipA, C-terminal LOS88_22600 IPR009000 Translation protein, beta-barrel domain superfamily LOS88_22600 IPR000795 Transcription factor, GTP-binding domain LOS88_22600 IPR005225 Small GTP-binding protein domain LOS88_22600 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22600 IPR006298 GTP-binding protein TypA LOS88_22600 IPR004161 Translation elongation factor EFTu-like, domain 2 LOS88_22600 IPR000640 Elongation factor EFG, domain V-like LOS88_22600 IPR035647 EF-G domain III/V-like LOS88_22600 IPR035651 BipA, domain V LOS88_22600 IPR031157 Tr-type G domain, conserved site LOS88_22605 IPR027302 Glutamine synthetase, N-terminal conserved site LOS88_22605 IPR001637 Glutamine synthetase class-I, adenylation site LOS88_22605 IPR027303 Glutamine synthetase, glycine-rich site LOS88_22605 IPR004809 Glutamine synthetase type I LOS88_22605 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LOS88_22605 IPR036651 Glutamine synthetase, N-terminal domain superfamily LOS88_22605 IPR008147 Glutamine synthetase, beta-Grasp domain LOS88_22605 IPR008146 Glutamine synthetase, catalytic domain LOS88_22615 IPR013767 PAS fold LOS88_22615 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_22615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_22615 IPR005467 Histidine kinase domain LOS88_22615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_22615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_22615 IPR035965 PAS domain superfamily LOS88_22615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_22615 IPR000014 PAS domain LOS88_22620 IPR011006 CheY-like superfamily LOS88_22620 IPR010114 DNA-binding transcriptional regulator NtrC LOS88_22620 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LOS88_22620 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LOS88_22620 IPR002078 RNA polymerase sigma factor 54 interaction domain LOS88_22620 IPR025944 Sigma-54 interaction domain, conserved site LOS88_22620 IPR001789 Signal transduction response regulator, receiver domain LOS88_22620 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22620 IPR002197 DNA binding HTH domain, Fis-type LOS88_22620 IPR003593 AAA+ ATPase domain LOS88_22620 IPR009057 Homeobox-like domain superfamily LOS88_22625 IPR001365 Adenosine/AMP deaminase domain LOS88_22625 IPR028893 Adenosine deaminase LOS88_22625 IPR006330 Adenosine/adenine deaminase LOS88_22625 IPR032466 Metal-dependent hydrolase LOS88_22630 IPR003798 DNA recombination RmuC LOS88_22645 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22645 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22645 IPR023761 Transcriptional repressor HTH, NsrR LOS88_22645 IPR030489 Transcription regulator Rrf2-type, conserved site LOS88_22645 IPR000944 Transcription regulator Rrf2-type LOS88_22650 IPR029056 Ribokinase-like LOS88_22650 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LOS88_22650 IPR011611 Carbohydrate kinase PfkB LOS88_22650 IPR002139 Ribokinase/fructokinase LOS88_22655 IPR005119 LysR, substrate-binding LOS88_22655 IPR000847 Transcription regulator HTH, LysR LOS88_22655 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22655 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22660 IPR022310 NAD/GMP synthase LOS88_22660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_22660 IPR022955 GMP synthase LOS88_22660 IPR004739 GMP synthase, glutamine amidotransferase LOS88_22660 IPR029062 Class I glutamine amidotransferase-like LOS88_22660 IPR017926 Glutamine amidotransferase LOS88_22660 IPR001674 GMP synthase, C-terminal LOS88_22660 IPR025777 GMP synthetase ATP pyrophosphatase domain LOS88_22665 IPR015590 Aldehyde dehydrogenase domain LOS88_22665 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_22665 IPR010061 Methylmalonate-semialdehyde dehydrogenase LOS88_22665 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_22665 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_22665 IPR016160 Aldehyde dehydrogenase, cysteine active site LOS88_22670 IPR005814 Aminotransferase class-III LOS88_22670 IPR015424 Pyridoxal phosphate-dependent transferase LOS88_22670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LOS88_22670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LOS88_22675 IPR013096 Cupin 2, conserved barrel LOS88_22675 IPR011051 RmlC-like cupin domain superfamily LOS88_22675 IPR014710 RmlC-like jelly roll fold LOS88_22675 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_22675 IPR001387 Cro/C1-type helix-turn-helix domain LOS88_22680 IPR015590 Aldehyde dehydrogenase domain LOS88_22680 IPR016162 Aldehyde dehydrogenase, N-terminal LOS88_22680 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LOS88_22680 IPR016163 Aldehyde dehydrogenase, C-terminal LOS88_22680 IPR016161 Aldehyde/histidinol dehydrogenase LOS88_22680 IPR016160 Aldehyde dehydrogenase, cysteine active site LOS88_22690 IPR000620 EamA domain LOS88_22690 IPR004626 RarD protein LOS88_22695 IPR003660 HAMP domain LOS88_22695 IPR004090 Chemotaxis methyl-accepting receptor LOS88_22695 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_22695 IPR033480 Single Cache domain 2 LOS88_22700 IPR007272 Sulphur transport domain LOS88_22705 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LOS88_22705 IPR036737 OmpA-like domain superfamily LOS88_22705 IPR006690 Outer membrane protein, OmpA-like, conserved site LOS88_22705 IPR006665 OmpA-like domain LOS88_22705 IPR002368 Outer membrane protein, OmpA LOS88_22705 IPR006664 Outer membrane protein, bacterial LOS88_22705 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LOS88_22710 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LOS88_22710 IPR001647 DNA-binding HTH domain, TetR-type LOS88_22710 IPR009057 Homeobox-like domain superfamily LOS88_22720 IPR001721 Threonine dehydratase, ACT-like domain LOS88_22720 IPR001926 Pyridoxal-phosphate dependent enzyme LOS88_22720 IPR038110 Threonine dehydratase, ACT-like domain superfamily LOS88_22720 IPR005787 Threonine dehydratase, biosynthetic LOS88_22720 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LOS88_22720 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LOS88_22725 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site LOS88_22725 IPR037237 IlvD/EDD, N-terminal domain LOS88_22725 IPR004404 Dihydroxy-acid dehydratase LOS88_22725 IPR042096 Dihydroxy-acid dehydratase, C-terminal LOS88_22725 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase LOS88_22730 IPR001544 Aminotransferase class IV LOS88_22730 IPR018300 Aminotransferase, class IV, conserved site LOS88_22730 IPR036038 Aminotransferase-like, PLP-dependent enzymes LOS88_22730 IPR005785 Branched-chain amino acid aminotransferase I LOS88_22730 IPR033939 Branched-chain aminotransferase LOS88_22735 IPR002912 ACT domain LOS88_22740 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LOS88_22740 IPR000399 TPP-binding enzyme, conserved site LOS88_22740 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LOS88_22740 IPR039368 Acetolactate synthase large subunit, TPP binding domain LOS88_22740 IPR029061 Thiamin diphosphate-binding fold LOS88_22740 IPR029035 DHS-like NAD/FAD-binding domain superfamily LOS88_22740 IPR012846 Acetolactate synthase, large subunit, biosynthetic LOS88_22740 IPR012000 Thiamine pyrophosphate enzyme, central domain LOS88_22745 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_22745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_22745 IPR000523 Magnesium chelatase ChlI domain LOS88_22745 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_22745 IPR004482 Mg chelatase-related protein LOS88_22745 IPR003593 AAA+ ATPase domain LOS88_22745 IPR001208 MCM domain LOS88_22745 IPR025158 Mg chelatase-related protein, C-terminal domain LOS88_22750 IPR002123 Phospholipid/glycerol acyltransferase LOS88_22755 IPR002123 Phospholipid/glycerol acyltransferase LOS88_22760 IPR007553 Domain of unknown function DUF523 LOS88_22770 IPR036380 Isochorismatase-like superfamily LOS88_22770 IPR000868 Isochorismatase-like LOS88_22775 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal LOS88_22775 IPR007229 Nicotinate phosphoribosyltransferase family LOS88_22775 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain LOS88_22775 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase LOS88_22775 IPR006406 Nicotinate phosphoribosyltransferase LOS88_22780 IPR001853 DSBA-like thioredoxin domain LOS88_22780 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL LOS88_22780 IPR036249 Thioredoxin-like superfamily LOS88_22780 IPR013766 Thioredoxin domain LOS88_22785 IPR002575 Aminoglycoside phosphotransferase LOS88_22785 IPR032882 SrkA/RdoA protein kinase LOS88_22785 IPR011009 Protein kinase-like domain superfamily LOS88_22790 IPR013783 Immunoglobulin-like fold LOS88_22790 IPR032879 FixG, C-terminal immunoglobulin-like domain LOS88_22790 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG LOS88_22790 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LOS88_22790 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LOS88_22795 IPR009383 Protein of unknown function DUF1040 LOS88_22795 IPR038134 YihD-like superfamily LOS88_22800 IPR001633 EAL domain LOS88_22800 IPR035919 EAL domain superfamily LOS88_22800 IPR003018 GAF domain LOS88_22800 IPR029016 GAF-like domain superfamily LOS88_22800 IPR000160 GGDEF domain LOS88_22800 IPR029787 Nucleotide cyclase LOS88_22800 IPR016132 Phytochrome chromophore attachment domain LOS88_22800 IPR013515 Phytochrome, central region LOS88_22800 IPR001294 Phytochrome LOS88_22805 IPR011789 Cu(I)-responsive transcriptional regulator LOS88_22805 IPR000551 MerR-type HTH domain LOS88_22805 IPR009061 Putative DNA-binding domain superfamily LOS88_22810 IPR023299 P-type ATPase, cytoplasmic domain N LOS88_22810 IPR023298 P-type ATPase, transmembrane domain superfamily LOS88_22810 IPR018303 P-type ATPase, phosphorylation site LOS88_22810 IPR001757 P-type ATPase LOS88_22810 IPR036163 Heavy metal-associated domain superfamily LOS88_22810 IPR006121 Heavy metal-associated domain, HMA LOS88_22810 IPR027256 P-type ATPase, subfamily IB LOS88_22810 IPR017969 Heavy-metal-associated, conserved site LOS88_22810 IPR023214 HAD superfamily LOS88_22810 IPR036412 HAD-like superfamily LOS88_22810 IPR008250 P-type ATPase, A domain superfamily LOS88_22810 IPR006122 Heavy metal-associated domain, copper ion-binding LOS88_22815 IPR023031 Orotate phosphoribosyltransferase LOS88_22815 IPR004467 Orotate phosphoribosyl transferase domain LOS88_22815 IPR000836 Phosphoribosyltransferase domain LOS88_22815 IPR029057 Phosphoribosyltransferase-like LOS88_22820 IPR002381 Ribonuclease PH, bacterial-type LOS88_22820 IPR018336 Ribonuclease PH, conserved site LOS88_22820 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_22820 IPR027408 PNPase/RNase PH domain superfamily LOS88_22820 IPR036345 Exoribonuclease, PH domain 2 superfamily LOS88_22820 IPR015847 Exoribonuclease, phosphorolytic domain 2 LOS88_22820 IPR001247 Exoribonuclease, phosphorolytic domain 1 LOS88_22825 IPR005229 Conserved hypothetical protein CHP00255 LOS88_22825 IPR013551 Domain of unknown function DUF1732 LOS88_22825 IPR013527 YicC-like, N-terminal LOS88_22830 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22830 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22830 IPR005119 LysR, substrate-binding LOS88_22830 IPR000847 Transcription regulator HTH, LysR LOS88_22835 IPR011032 GroES-like superfamily LOS88_22835 IPR036291 NAD(P)-binding domain superfamily LOS88_22835 IPR020843 Polyketide synthase, enoylreductase domain LOS88_22835 IPR013154 Alcohol dehydrogenase, N-terminal LOS88_22835 IPR013149 Alcohol dehydrogenase, C-terminal LOS88_22835 IPR014183 Alcohol dehydrogenase class III LOS88_22835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LOS88_22840 IPR014186 S-formylglutathione hydrolase LOS88_22840 IPR000801 Putative esterase LOS88_22840 IPR029058 Alpha/Beta hydrolase fold LOS88_22845 IPR036390 Winged helix DNA-binding domain superfamily LOS88_22845 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22845 IPR000847 Transcription regulator HTH, LysR LOS88_22845 IPR005119 LysR, substrate-binding LOS88_22870 IPR037523 Vicinal oxygen chelate (VOC) domain LOS88_22870 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LOS88_22885 IPR024775 DinB-like domain LOS88_22885 IPR034660 DinB/YfiT-like putative metalloenzymes LOS88_22885 IPR017806 Ergothioneine biosynthesis protein EgtB LOS88_22885 IPR032890 Hercynine oxygenase, Actinobacteria LOS88_22885 IPR005532 Sulfatase-modifying factor enzyme LOS88_22885 IPR042095 Sulfatase-modifying factor enzyme superfamily LOS88_22885 IPR016187 C-type lectin fold LOS88_22895 IPR002293 Amino acid/polyamine transporter I LOS88_22900 IPR012340 Nucleic acid-binding, OB-fold LOS88_22900 IPR002547 tRNA-binding domain LOS88_22905 IPR002293 Amino acid/polyamine transporter I LOS88_22910 IPR004375 YhcH/YjgK/YiaL family LOS88_22910 IPR037012 YhcH/YjgK/YiaL superfamily LOS88_22915 IPR004199 Beta galactosidase small chain/ domain 5 LOS88_22915 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily LOS88_22915 IPR011013 Galactose mutarotase-like domain superfamily LOS88_22915 IPR008979 Galactose-binding-like domain superfamily LOS88_22915 IPR014718 Glycoside hydrolase-type carbohydrate-binding LOS88_22915 IPR006101 Glycoside hydrolase, family 2 LOS88_22915 IPR023232 Glycoside hydrolase, family 2, active site LOS88_22915 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase LOS88_22915 IPR013783 Immunoglobulin-like fold LOS88_22915 IPR023230 Glycoside hydrolase, family 2, conserved site LOS88_22915 IPR017853 Glycoside hydrolase superfamily LOS88_22915 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich LOS88_22915 IPR032312 Beta-galactosidase, domain 4 LOS88_22915 IPR006104 Glycosyl hydrolases family 2, sugar binding domain LOS88_22915 IPR006103 Glycoside hydrolase family 2, catalytic domain LOS88_22920 IPR000843 LacI-type HTH domain LOS88_22920 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_22920 IPR028082 Periplasmic binding protein-like I LOS88_22960 IPR001451 Hexapeptide repeat LOS88_22960 IPR011004 Trimeric LpxA-like superfamily LOS88_22965 IPR036397 Ribonuclease H superfamily LOS88_22965 IPR012337 Ribonuclease H-like superfamily LOS88_22965 IPR029060 PIN-like domain superfamily LOS88_22965 IPR008918 Helix-hairpin-helix motif, class 2 LOS88_22965 IPR002298 DNA polymerase A LOS88_22965 IPR018320 DNA polymerase 1 LOS88_22965 IPR019760 DNA-directed DNA polymerase, family A, conserved site LOS88_22965 IPR001098 DNA-directed DNA polymerase, family A, palm domain LOS88_22965 IPR036279 5'-3' exonuclease, C-terminal domain superfamily LOS88_22965 IPR002421 5'-3' exonuclease, N-terminal LOS88_22965 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal LOS88_22965 IPR002562 3'-5' exonuclease domain LOS88_22965 IPR020045 DNA polymerase I-like, H3TH domain LOS88_22970 IPR029062 Class I glutamine amidotransferase-like LOS88_22970 IPR026041 Glyoxalase ElbB LOS88_22975 IPR009252 Cell division protein ZapB LOS88_22985 IPR005881 Serine O-acetyltransferase LOS88_22985 IPR042122 Serine acetyltransferase, N-terminal domain superfamily LOS88_22985 IPR011004 Trimeric LpxA-like superfamily LOS88_22985 IPR018357 Hexapeptide transferase, conserved site LOS88_22985 IPR001451 Hexapeptide repeat LOS88_22985 IPR010493 Serine acetyltransferase, N-terminal LOS88_22990 IPR002524 Cation efflux protein LOS88_22990 IPR027470 Cation efflux protein, cytoplasmic domain LOS88_22990 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LOS88_22990 IPR023783 Cation efflux pump FieF LOS88_22990 IPR027469 Cation efflux transmembrane domain superfamily LOS88_22995 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_22995 IPR039420 Transcriptional regulatory protein WalR-like LOS88_22995 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_22995 IPR011006 CheY-like superfamily LOS88_22995 IPR001789 Signal transduction response regulator, receiver domain LOS88_23000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_23000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_23000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_23000 IPR005467 Histidine kinase domain LOS88_23000 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_23000 IPR003660 HAMP domain LOS88_23000 IPR038515 CpxA, periplasmic domain superfamily LOS88_23000 IPR032404 Two-component sensor protein CpxA, periplasmic domain LOS88_23000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_23005 IPR029028 Alpha/beta knot methyltransferases LOS88_23005 IPR001537 tRNA/rRNA methyltransferase, SpoU type LOS88_23005 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase LOS88_23005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LOS88_23010 IPR002528 Multi antimicrobial extrusion protein LOS88_23015 IPR003782 Copper chaperone SCO1/SenC LOS88_23015 IPR036249 Thioredoxin-like superfamily LOS88_23025 IPR036390 Winged helix DNA-binding domain superfamily LOS88_23025 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_23025 IPR015927 Peptidase S24/S26A/S26B/S26C LOS88_23025 IPR039418 LexA-like LOS88_23025 IPR006199 LexA repressor, DNA-binding domain LOS88_23025 IPR036286 LexA/Signal peptidase-like superfamily LOS88_23025 IPR006200 Transcription regulator LexA LOS88_23025 IPR006197 Peptidase S24, LexA-like LOS88_23030 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase LOS88_23030 IPR041728 GPAT/DHAPAT, acyltransferase domain LOS88_23030 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB LOS88_23030 IPR002123 Phospholipid/glycerol acyltransferase LOS88_23035 IPR006370 4-hydroxybenzoate polyprenyltransferase-like LOS88_23035 IPR039653 Prenyltransferase LOS88_23035 IPR000537 UbiA prenyltransferase family LOS88_23035 IPR030470 UbiA prenyltransferase conserved site LOS88_23040 IPR007440 Chorismate--pyruvate lyase LOS88_23040 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LOS88_23060 IPR014188 Acrylyl-CoA reductase AcuI LOS88_23060 IPR013149 Alcohol dehydrogenase, C-terminal LOS88_23060 IPR013154 Alcohol dehydrogenase, N-terminal LOS88_23060 IPR011032 GroES-like superfamily LOS88_23060 IPR036291 NAD(P)-binding domain superfamily LOS88_23060 IPR020843 Polyketide synthase, enoylreductase domain LOS88_23065 IPR001761 Periplasmic binding protein/LacI sugar binding domain LOS88_23065 IPR028082 Periplasmic binding protein-like I LOS88_23065 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_23065 IPR000843 LacI-type HTH domain LOS88_23070 IPR016152 Phosphotransferase/anion transporter LOS88_23070 IPR002178 PTS EIIA type-2 domain LOS88_23080 IPR004703 Phosphotransferase system, sugar-specific permease component LOS88_23085 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal LOS88_23085 IPR039901 3-deoxy-D-manno-octulosonic acid transferase LOS88_23085 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily LOS88_23090 IPR002201 Glycosyl transferase, family 9 LOS88_23090 IPR011910 ADP-heptose--LPS heptosyltransferase 2 LOS88_23095 IPR001173 Glycosyltransferase 2-like LOS88_23095 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_23100 IPR002201 Glycosyl transferase, family 9 LOS88_23105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LOS88_23105 IPR004821 Cytidyltransferase-like domain LOS88_23105 IPR001980 Phosphopantetheine adenylyltransferase LOS88_23110 IPR007488 Protein of unknown function DUF535 LOS88_23115 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding LOS88_23115 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site LOS88_23115 IPR020629 Formamidopyrimidine-DNA glycosylase LOS88_23115 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type LOS88_23115 IPR035937 MutM-like, N-terminal LOS88_23115 IPR010979 Ribosomal protein S13-like, H2TH LOS88_23115 IPR010663 Zinc finger, FPG/IleRS-type LOS88_23115 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain LOS88_23125 IPR001705 Ribosomal protein L33 LOS88_23125 IPR018264 Ribosomal protein L33, conserved site LOS88_23125 IPR011332 Zinc-binding ribosomal protein LOS88_23125 IPR038584 Ribosomal protein L33 superfamily LOS88_23130 IPR001383 Ribosomal protein L28 LOS88_23130 IPR037147 Ribosomal protein L28/L24 superfamily LOS88_23130 IPR034704 L28p-like LOS88_23130 IPR026569 Ribosomal protein L28/L24 LOS88_23135 IPR001405 Uncharacterised protein family UPF0758 LOS88_23135 IPR020891 Uncharacterised protein family UPF0758, conserved site LOS88_23135 IPR037518 MPN domain LOS88_23135 IPR025657 RadC-like JAB domain LOS88_23135 IPR010994 RuvA domain 2-like LOS88_23140 IPR036551 Flavin prenyltransferase-like LOS88_23140 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal LOS88_23140 IPR003382 Flavoprotein LOS88_23140 IPR035929 CoaB-like superfamily LOS88_23140 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC LOS88_23145 IPR029054 dUTPase-like LOS88_23145 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase LOS88_23145 IPR033704 dUTPase, trimeric LOS88_23145 IPR036157 dUTPase-like superfamily LOS88_23150 IPR023769 Nucleoid occlusion factor SlmA LOS88_23150 IPR009057 Homeobox-like domain superfamily LOS88_23150 IPR001647 DNA-binding HTH domain, TetR-type LOS88_23155 IPR011066 Mechanosensitive ion channel MscS, C-terminal LOS88_23155 IPR010920 LSM domain superfamily LOS88_23155 IPR006686 Mechanosensitive ion channel MscS, conserved site LOS88_23155 IPR006685 Mechanosensitive ion channel MscS LOS88_23155 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LOS88_23155 IPR023408 Mechanosensitive ion channel MscS domain superfamily LOS88_23155 IPR008910 Conserved TM helix LOS88_23160 IPR001672 Phosphoglucose isomerase (PGI) LOS88_23160 IPR023096 Phosphoglucose isomerase, C-terminal LOS88_23160 IPR018189 Phosphoglucose isomerase, conserved site LOS88_23160 IPR035476 Phosphoglucose isomerase, SIS domain 1 LOS88_23160 IPR035482 Phosphoglucose isomerase, SIS domain 2 LOS88_23165 IPR036291 NAD(P)-binding domain superfamily LOS88_23165 IPR013116 Ketol-acid reductoisomerase, N-terminal LOS88_23165 IPR000506 Ketol-acid reductoisomerase, C-terminal LOS88_23165 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LOS88_23165 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_23165 IPR013023 Ketol-acid reductoisomerase LOS88_23170 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain LOS88_23170 IPR005119 LysR, substrate-binding LOS88_23170 IPR000847 Transcription regulator HTH, LysR LOS88_23170 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_23170 IPR036390 Winged helix DNA-binding domain superfamily LOS88_23185 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain LOS88_23185 IPR003781 CoA-binding LOS88_23185 IPR016102 Succinyl-CoA synthetase-like LOS88_23185 IPR011761 ATP-grasp fold LOS88_23185 IPR016181 Acyl-CoA N-acyltransferase LOS88_23185 IPR013815 ATP-grasp fold, subdomain 1 LOS88_23185 IPR000182 GNAT domain LOS88_23185 IPR036291 NAD(P)-binding domain superfamily LOS88_23220 IPR008254 Flavodoxin/nitric oxide synthase LOS88_23220 IPR001226 Flavodoxin, conserved site LOS88_23220 IPR026816 Flavodoxin domain LOS88_23220 IPR029039 Flavoprotein-like superfamily LOS88_23225 IPR003445 Cation transporter LOS88_23225 IPR004772 TrkH potassium transport family LOS88_23230 IPR023582 Impact family LOS88_23230 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site LOS88_23230 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal LOS88_23230 IPR036956 Impact, N-terminal domain superfamily LOS88_23230 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_23230 IPR015796 Impact family, bacterial/archaeal LOS88_23230 IPR035647 EF-G domain III/V-like LOS88_23230 IPR001498 Impact, N-terminal LOS88_23235 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LOS88_23235 IPR036005 Creatinase/aminopeptidase-like LOS88_23235 IPR000994 Peptidase M24 LOS88_23235 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LOS88_23235 IPR022846 Xaa-Pro dipeptidase LOS88_23240 IPR000873 AMP-dependent synthetase/ligase LOS88_23240 IPR005914 Acetoacetyl-CoA synthase LOS88_23240 IPR025110 AMP-binding enzyme, C-terminal domain LOS88_23240 IPR042099 AMP-dependent synthetase-like superfamily LOS88_23240 IPR020845 AMP-binding, conserved site LOS88_23245 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LOS88_23245 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LOS88_23245 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site LOS88_23245 IPR029045 ClpP/crotonase-like domain superfamily LOS88_23245 IPR001753 Enoyl-CoA hydratase/isomerase LOS88_23245 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LOS88_23245 IPR012799 Fatty oxidation complex, alpha subunit FadB LOS88_23245 IPR036291 NAD(P)-binding domain superfamily LOS88_23250 IPR020615 Thiolase, acyl-enzyme intermediate active site LOS88_23250 IPR016039 Thiolase-like LOS88_23250 IPR020613 Thiolase, conserved site LOS88_23250 IPR020616 Thiolase, N-terminal LOS88_23250 IPR002155 Thiolase LOS88_23250 IPR012805 Acetyl-CoA C-acyltransferase FadA LOS88_23250 IPR020617 Thiolase, C-terminal LOS88_23250 IPR020610 Thiolase, active site LOS88_23255 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_23255 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_23255 IPR011006 CheY-like superfamily LOS88_23255 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_23255 IPR001789 Signal transduction response regulator, receiver domain LOS88_23255 IPR039420 Transcriptional regulatory protein WalR-like LOS88_23260 IPR003660 HAMP domain LOS88_23260 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_23260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_23260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_23260 IPR005467 Histidine kinase domain LOS88_23260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_23260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_23265 IPR006059 Bacterial extracellular solute-binding protein LOS88_23275 IPR036868 TusA-like domain superfamily LOS88_23275 IPR001455 TusA-like domain LOS88_23275 IPR022931 Sulfur carrier protein TusA LOS88_23280 IPR035709 RutC family, YoaB-like LOS88_23280 IPR006175 YjgF/YER057c/UK114 family LOS88_23280 IPR019897 RidA, conserved site LOS88_23280 IPR035959 RutC-like superfamily LOS88_23285 IPR036737 OmpA-like domain superfamily LOS88_23285 IPR039567 Glycine zipper domain LOS88_23285 IPR006664 Outer membrane protein, bacterial LOS88_23285 IPR006665 OmpA-like domain LOS88_23285 IPR006690 Outer membrane protein, OmpA-like, conserved site LOS88_23290 IPR004597 DNA-3-methyladenine glycosylase I LOS88_23290 IPR011257 DNA glycosylase LOS88_23290 IPR005019 Methyladenine glycosylase LOS88_23295 IPR006194 Glycine-tRNA synthetase, heterodimeric LOS88_23295 IPR002310 Glycine-tRNA ligase, alpha subunit LOS88_23300 IPR008909 DALR anticodon binding LOS88_23300 IPR015944 Glycine-tRNA ligase, beta subunit LOS88_23300 IPR006194 Glycine-tRNA synthetase, heterodimeric LOS88_23310 IPR035919 EAL domain superfamily LOS88_23310 IPR000160 GGDEF domain LOS88_23310 IPR005330 MHYT domain LOS88_23310 IPR029787 Nucleotide cyclase LOS88_23310 IPR001633 EAL domain LOS88_23315 IPR003540 ADP ribosyltransferase LOS88_23315 IPR003537 Yersinia virulence determinant YopE LOS88_23315 IPR014773 Virulence factor YopE, GAP domain LOS88_23315 IPR037168 Virulence factor YopE, GAP domain superfamily LOS88_23320 IPR010261 Tir chaperone protein (CesT) family LOS88_23320 IPR005416 Type III secretion chaperone SycE LOS88_23340 IPR003660 HAMP domain LOS88_23340 IPR004090 Chemotaxis methyl-accepting receptor LOS88_23340 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_23345 IPR000843 LacI-type HTH domain LOS88_23345 IPR023588 Transcription regulator HTH, PurR LOS88_23345 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LOS88_23345 IPR028082 Periplasmic binding protein-like I LOS88_23350 IPR028081 Leucine-binding protein domain LOS88_23350 IPR000709 Leu/Ile/Val-binding protein LOS88_23350 IPR028082 Periplasmic binding protein-like I LOS88_23355 IPR001851 ABC transporter, permease LOS88_23360 IPR001851 ABC transporter, permease LOS88_23360 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal LOS88_23365 IPR003593 AAA+ ATPase domain LOS88_23365 IPR003439 ABC transporter-like LOS88_23365 IPR017871 ABC transporter, conserved site LOS88_23365 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LOS88_23365 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23370 IPR003593 AAA+ ATPase domain LOS88_23370 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein LOS88_23370 IPR003439 ABC transporter-like LOS88_23370 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23370 IPR017871 ABC transporter, conserved site LOS88_23375 IPR023695 Thiosulfate sulfurtransferase, bacterial LOS88_23375 IPR036873 Rhodanese-like domain superfamily LOS88_23375 IPR001763 Rhodanese-like domain LOS88_23380 IPR035952 Rhomboid-like superfamily LOS88_23380 IPR038236 GlpG peptidase, N-terminal domain superfamily LOS88_23380 IPR022732 Peptidase S54, GlpG peptidase, N-terminal LOS88_23380 IPR022764 Peptidase S54, rhomboid domain LOS88_23380 IPR023662 Rhomboid protease GlpG LOS88_23385 IPR007475 Ubiquinone biosynthesis accessory factor UbiK LOS88_23390 IPR035919 EAL domain superfamily LOS88_23390 IPR000160 GGDEF domain LOS88_23390 IPR029787 Nucleotide cyclase LOS88_23390 IPR001610 PAC motif LOS88_23390 IPR000700 PAS-associated, C-terminal LOS88_23390 IPR035965 PAS domain superfamily LOS88_23390 IPR013656 PAS fold-4 LOS88_23390 IPR013655 PAS fold-3 LOS88_23390 IPR001633 EAL domain LOS88_23390 IPR000014 PAS domain LOS88_23395 IPR017927 FAD-binding domain, ferredoxin reductase-type LOS88_23395 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LOS88_23395 IPR001433 Oxidoreductase FAD/NAD(P)-binding LOS88_23395 IPR017938 Riboflavin synthase-like beta-barrel LOS88_23400 IPR023677 UbiD decarboxylyase, bacteria LOS88_23400 IPR002830 UbiD decarboxylyase family LOS88_23410 IPR004665 Transcription termination factor Rho LOS88_23410 IPR011113 Rho termination factor, RNA-binding domain LOS88_23410 IPR003593 AAA+ ATPase domain LOS88_23410 IPR036269 Rho termination factor, N-terminal domain superfamily LOS88_23410 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LOS88_23410 IPR041703 Transcription termination factor Rho, ATP binding domain LOS88_23410 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23410 IPR012340 Nucleic acid-binding, OB-fold LOS88_23410 IPR011129 Cold shock domain LOS88_23410 IPR011112 Rho termination factor, N-terminal LOS88_23415 IPR013766 Thioredoxin domain LOS88_23415 IPR005746 Thioredoxin LOS88_23415 IPR036249 Thioredoxin-like superfamily LOS88_23415 IPR017937 Thioredoxin, conserved site LOS88_23420 IPR023554 ATP-dependent RNA helicase RhlB type LOS88_23420 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23420 IPR001650 Helicase, C-terminal LOS88_23420 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_23420 IPR014014 RNA helicase, DEAD-box type, Q motif LOS88_23420 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LOS88_23420 IPR011545 DEAD/DEAH box helicase domain LOS88_23425 IPR030673 Pyrophosphatase, GppA/Ppx-type LOS88_23425 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase LOS88_23425 IPR003695 Ppx/GppA phosphatase LOS88_23435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_23435 IPR007536 Ribosomal RNA small subunit methyltransferase J LOS88_23440 IPR029787 Nucleotide cyclase LOS88_23440 IPR035919 EAL domain superfamily LOS88_23440 IPR001633 EAL domain LOS88_23440 IPR005330 MHYT domain LOS88_23440 IPR000160 GGDEF domain LOS88_23445 IPR001567 Peptidase M3A/M3B catalytic domain LOS88_23445 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LOS88_23460 IPR004302 Cellulose/chitin-binding protein, N-terminal LOS88_23460 IPR041029 N-acetylglucosamine binding protein A domain 2 LOS88_23460 IPR020879 N-acetylglucosamine-binding protein A LOS88_23460 IPR014756 Immunoglobulin E-set LOS88_23465 IPR030656 Delta-aminolevulinic acid dehydratase, active site LOS88_23465 IPR013785 Aldolase-type TIM barrel LOS88_23465 IPR001731 Delta-aminolevulinic acid dehydratase LOS88_23470 IPR018228 Deoxyribonuclease, TatD-related, conserved site LOS88_23470 IPR024918 3'-5' ssDNA/RNA exonuclease TatD LOS88_23470 IPR032466 Metal-dependent hydrolase LOS88_23470 IPR001130 TatD family LOS88_23475 IPR002033 Sec-independent periplasmic protein translocase TatC LOS88_23475 IPR019820 Sec-independent periplasmic protein translocase, conserved site LOS88_23480 IPR018448 Twin-arginine translocation protein TatB LOS88_23480 IPR003369 Sec-independent protein translocase protein TatA/B/E LOS88_23485 IPR006312 Sec-independent protein translocase protein TatA/E LOS88_23485 IPR003369 Sec-independent protein translocase protein TatA/B/E LOS88_23490 IPR010232 Probable protein kinase UbiB LOS88_23490 IPR004147 UbiB domain LOS88_23490 IPR011009 Protein kinase-like domain superfamily LOS88_23495 IPR003033 SCP2 sterol-binding domain LOS88_23495 IPR036527 SCP2 sterol-binding domain superfamily LOS88_23495 IPR038989 Ubiquinone biosynthesis protein UbiJ LOS88_23500 IPR023576 UbiE/COQ5 methyltransferase, conserved site LOS88_23500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_23500 IPR004033 UbiE/COQ5 methyltransferase LOS88_23505 IPR003691 Putative fluoride ion transporter CrcB LOS88_23510 IPR011059 Metal-dependent hydrolase, composite domain superfamily LOS88_23510 IPR032466 Metal-dependent hydrolase LOS88_23510 IPR013108 Amidohydrolase 3 LOS88_23515 IPR030191 Cytosine permease LOS88_23515 IPR001248 Purine-cytosine permease LOS88_23515 IPR038271 Purine-cytosine permease superfamily LOS88_23560 IPR003538 Gram-negative bacterial TonB protein LOS88_23560 IPR006260 TonB/TolA, C-terminal LOS88_23560 IPR037682 TonB, C-terminal LOS88_23565 IPR003400 Biopolymer transport protein ExbD/TolR LOS88_23570 IPR002898 MotA/TolQ/ExbB proton channel LOS88_23575 IPR002898 MotA/TolQ/ExbB proton channel LOS88_23585 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_23585 IPR000792 Transcription regulator LuxR, C-terminal LOS88_23585 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily LOS88_23585 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LOS88_23585 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_23590 IPR017932 Glutamine amidotransferase type 2 domain LOS88_23590 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising LOS88_23590 IPR035466 GlmS/AgaS, SIS domain 1 LOS88_23590 IPR035490 GlmS/FrlB, SIS domain 2 LOS88_23590 IPR029055 Nucleophile aminohydrolases, N-terminal LOS88_23590 IPR001347 Sugar isomerase (SIS) LOS88_23595 IPR014036 DeoR C-terminal sensor domain LOS88_23595 IPR001034 DeoR-type HTH domain LOS88_23595 IPR037171 NagB/RpiA transferase-like LOS88_23595 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LOS88_23595 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_23595 IPR036390 Winged helix DNA-binding domain superfamily LOS88_23600 IPR016032 Signal transduction response regulator, C-terminal effector LOS88_23600 IPR001867 OmpR/PhoB-type DNA-binding domain LOS88_23600 IPR036388 Winged helix-like DNA-binding domain superfamily LOS88_23600 IPR039420 Transcriptional regulatory protein WalR-like LOS88_23600 IPR001789 Signal transduction response regulator, receiver domain LOS88_23600 IPR011006 CheY-like superfamily LOS88_23605 IPR003660 HAMP domain LOS88_23605 IPR003594 Histidine kinase/HSP90-like ATPase LOS88_23605 IPR005467 Histidine kinase domain LOS88_23605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LOS88_23605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LOS88_23605 IPR029151 Periplasmic sensor-like domain superfamily LOS88_23605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LOS88_23605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LOS88_23610 IPR012338 Beta-lactamase/transpeptidase-like LOS88_23610 IPR002137 Beta-lactamase, class-D active site LOS88_23610 IPR001460 Penicillin-binding protein, transpeptidase LOS88_23620 IPR010364 Uncharacterised protein family, inner membrane CreD LOS88_23635 IPR001296 Glycosyl transferase, family 1 LOS88_23635 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LOS88_23670 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23670 IPR003856 Polysaccharide chain length determinant N-terminal domain LOS88_23670 IPR032807 Tyrosine kinase, G-rich domain LOS88_23670 IPR005702 Exopolysaccharide synthesis protein LOS88_23670 IPR025669 AAA domain LOS88_23685 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ LOS88_23685 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LOS88_23685 IPR003362 Bacterial sugar transferase LOS88_23690 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase LOS88_23690 IPR011004 Trimeric LpxA-like superfamily LOS88_23690 IPR029044 Nucleotide-diphospho-sugar transferases LOS88_23690 IPR038009 GlmU, C-terminal LbH domain LOS88_23690 IPR018357 Hexapeptide transferase, conserved site LOS88_23690 IPR025877 MobA-like NTP transferase LOS88_23690 IPR001451 Hexapeptide repeat LOS88_23695 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily LOS88_23695 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit LOS88_23695 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LOS88_23695 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal LOS88_23695 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal LOS88_23700 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal LOS88_23700 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LOS88_23700 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23700 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LOS88_23700 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily LOS88_23700 IPR005722 ATP synthase, F1 complex, beta subunit LOS88_23700 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LOS88_23700 IPR003593 AAA+ ATPase domain LOS88_23705 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily LOS88_23705 IPR000131 ATP synthase, F1 complex, gamma subunit LOS88_23705 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site LOS88_23710 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LOS88_23710 IPR000793 ATP synthase, alpha subunit, C-terminal LOS88_23710 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain LOS88_23710 IPR005294 ATP synthase, F1 complex, alpha subunit LOS88_23710 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LOS88_23710 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LOS88_23710 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily LOS88_23710 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23710 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily LOS88_23710 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LOS88_23715 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily LOS88_23715 IPR020781 ATPase, OSCP/delta subunit, conserved site LOS88_23715 IPR000711 ATPase, OSCP/delta subunit LOS88_23720 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily LOS88_23720 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast LOS88_23720 IPR005864 ATP synthase, F0 complex, subunit b, bacterial LOS88_23725 IPR035921 F/V-ATP synthase subunit C superfamily LOS88_23725 IPR002379 V-ATPase proteolipid subunit C-like domain LOS88_23725 IPR038662 F1F0 ATP synthase subunit C superfamily LOS88_23725 IPR000454 ATP synthase, F0 complex, subunit C LOS88_23725 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast LOS88_23725 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site LOS88_23730 IPR000568 ATP synthase, F0 complex, subunit A LOS88_23730 IPR023011 ATP synthase, F0 complex, subunit A, active site LOS88_23730 IPR035908 ATP synthase, F0 complex, subunit A superfamily LOS88_23740 IPR036086 ParB/Sulfiredoxin superfamily LOS88_23740 IPR041468 ParB/Spo0J, HTH domain LOS88_23740 IPR004437 ParB/RepB/Spo0J partition protein LOS88_23740 IPR003115 ParB/Sulfiredoxin LOS88_23745 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23745 IPR025669 AAA domain LOS88_23750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_23750 IPR003682 rRNA small subunit methyltransferase G LOS88_23755 IPR036188 FAD/NAD(P)-binding domain superfamily LOS88_23755 IPR026904 GidA associated domain 3 LOS88_23755 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG LOS88_23755 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related LOS88_23755 IPR020595 MnmG-related, conserved site LOS88_23760 IPR029039 Flavoprotein-like superfamily LOS88_23760 IPR008254 Flavodoxin/nitric oxide synthase LOS88_23765 IPR010105 TonB-dependent siderophore receptor LOS88_23765 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LOS88_23765 IPR012910 TonB-dependent receptor, plug domain LOS88_23765 IPR039423 TonB-dependent receptor-like LOS88_23765 IPR037066 TonB-dependent receptor, plug domain superfamily LOS88_23765 IPR000531 TonB-dependent receptor-like, beta-barrel LOS88_23775 IPR003593 AAA+ ATPase domain LOS88_23775 IPR003439 ABC transporter-like LOS88_23775 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23775 IPR017871 ABC transporter, conserved site LOS88_23780 IPR002491 ABC transporter periplasmic binding domain LOS88_23785 IPR037294 ABC transporter, BtuC-like LOS88_23785 IPR000522 ABC transporter, permease protein, BtuC-like LOS88_23790 IPR012893 HipA-like, C-terminal LOS88_23790 IPR017508 HipA, N-terminal subdomain 1 LOS88_23820 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23820 IPR013670 EcoEI R protein C-terminal domain LOS88_23820 IPR006935 Helicase/UvrB, N-terminal LOS88_23820 IPR014001 Helicase superfamily 1/2, ATP-binding domain LOS88_23820 IPR001650 Helicase, C-terminal LOS88_23820 IPR029464 Type I restriction enzyme R protein, N-terminal domain LOS88_23825 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LOS88_23825 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain LOS88_23825 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily LOS88_23825 IPR003356 DNA methylase, adenine-specific LOS88_23825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LOS88_23830 IPR000055 Restriction endonuclease, type I, HsdS LOS88_23855 IPR038724 Regulatory protein RepA LOS88_23855 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23865 IPR023009 Tyrosine recombinase XerC/XerD LOS88_23865 IPR011932 Tyrosine recombinase XerD LOS88_23865 IPR004107 Integrase, SAM-like, N-terminal LOS88_23865 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_23865 IPR013762 Integrase-like, catalytic domain superfamily LOS88_23865 IPR002104 Integrase, catalytic domain LOS88_23865 IPR010998 Integrase/recombinase, N-terminal LOS88_23870 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 LOS88_23870 IPR005225 Small GTP-binding protein domain LOS88_23870 IPR025867 MnmE, helical domain LOS88_23870 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23870 IPR004520 tRNA modification GTPase MnmE LOS88_23870 IPR006073 GTP binding domain LOS88_23870 IPR018948 GTP-binding protein TrmE, N-terminal LOS88_23870 IPR031168 TrmE-type guanine nucleotide-binding domain LOS88_23870 IPR027368 tRNA modification GTPase MnmE domain 2 LOS88_23875 IPR019998 Membrane insertase YidC LOS88_23875 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LOS88_23875 IPR028053 Membrane insertase YidC, N-terminal LOS88_23875 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 LOS88_23875 IPR038210 Membrane insertase YidC, periplasmic domain LOS88_23875 IPR038221 YidC, periplasmic domain superfamily LOS88_23880 IPR002696 Putative membrane protein insertion efficiency factor LOS88_23885 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LOS88_23885 IPR020539 Ribonuclease P, conserved site LOS88_23885 IPR000100 Ribonuclease P LOS88_23885 IPR020568 Ribosomal protein S5 domain 2-type fold LOS88_23890 IPR020939 Ribosomal protein L34, conserved site LOS88_23890 IPR000271 Ribosomal protein L34 LOS88_23895 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23895 IPR017871 ABC transporter, conserved site LOS88_23895 IPR003439 ABC transporter-like LOS88_23895 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LOS88_23895 IPR003593 AAA+ ATPase domain LOS88_23900 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LOS88_23900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LOS88_23900 IPR035906 MetI-like superfamily LOS88_23905 IPR001320 Ionotropic glutamate receptor LOS88_23905 IPR018313 Solute-binding protein family 3, conserved site LOS88_23905 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LOS88_23935 IPR006118 Recombinase, conserved site LOS88_23935 IPR006120 Resolvase, HTH domain LOS88_23935 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_23935 IPR006119 Resolvase, N-terminal catalytic domain LOS88_23935 IPR009057 Homeobox-like domain superfamily LOS88_23990 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_23990 IPR011924 Lipoprotein releasing system, ATP-binding protein LOS88_23990 IPR015854 ABC transporter, lipoprotein release, LolD LOS88_23990 IPR017871 ABC transporter, conserved site LOS88_23990 IPR003439 ABC transporter-like LOS88_23990 IPR003593 AAA+ ATPase domain LOS88_24000 IPR006143 RND efflux pump, membrane fusion protein LOS88_24000 IPR022824 Multidrug resistance protein MdtA LOS88_24000 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LOS88_24005 IPR023769 Nucleoid occlusion factor SlmA LOS88_24005 IPR001647 DNA-binding HTH domain, TetR-type LOS88_24005 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LOS88_24005 IPR009057 Homeobox-like domain superfamily LOS88_24010 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal LOS88_24010 IPR003346 Transposase, IS116/IS110/IS902 LOS88_24035 IPR005094 Endonuclease relaxase, MobA/VirD2 LOS88_24070 IPR035919 EAL domain superfamily LOS88_24070 IPR000160 GGDEF domain LOS88_24070 IPR005330 MHYT domain LOS88_24070 IPR029787 Nucleotide cyclase LOS88_24070 IPR001633 EAL domain LOS88_24095 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_24095 IPR035965 PAS domain superfamily LOS88_24095 IPR004090 Chemotaxis methyl-accepting receptor LOS88_24095 IPR000700 PAS-associated, C-terminal LOS88_24095 IPR000014 PAS domain LOS88_24095 IPR001610 PAC motif LOS88_24095 IPR013655 PAS fold-3 LOS88_24100 IPR032806 H repeat-associated protein, N-terminal LOS88_24100 IPR002559 Transposase, IS4-like LOS88_24110 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LOS88_24110 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily LOS88_24110 IPR004386 Toxin-antitoxin system, YafQ-like toxin LOS88_24115 IPR009057 Homeobox-like domain superfamily LOS88_24115 IPR006119 Resolvase, N-terminal catalytic domain LOS88_24115 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_24115 IPR006118 Recombinase, conserved site LOS88_24115 IPR006120 Resolvase, HTH domain LOS88_24120 IPR013762 Integrase-like, catalytic domain superfamily LOS88_24120 IPR002104 Integrase, catalytic domain LOS88_24120 IPR011946 Integrase, integron-type LOS88_24120 IPR010998 Integrase/recombinase, N-terminal LOS88_24120 IPR004107 Integrase, SAM-like, N-terminal LOS88_24120 IPR011010 DNA breaking-rejoining enzyme, catalytic core LOS88_24125 IPR000182 GNAT domain LOS88_24125 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type LOS88_24125 IPR016181 Acyl-CoA N-acyltransferase LOS88_24135 IPR032806 H repeat-associated protein, N-terminal LOS88_24135 IPR002559 Transposase, IS4-like LOS88_24150 IPR018357 Hexapeptide transferase, conserved site LOS88_24150 IPR001451 Hexapeptide repeat LOS88_24150 IPR011004 Trimeric LpxA-like superfamily LOS88_24165 IPR001466 Beta-lactamase-related LOS88_24165 IPR012338 Beta-lactamase/transpeptidase-like LOS88_24165 IPR001586 Beta-lactamase, class-C active site LOS88_24195 IPR016181 Acyl-CoA N-acyltransferase LOS88_24195 IPR000182 GNAT domain LOS88_24195 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type LOS88_24200 IPR002559 Transposase, IS4-like LOS88_24200 IPR012337 Ribonuclease H-like superfamily LOS88_24205 IPR000390 Small multidrug resistance protein family LOS88_24210 IPR000489 Pterin-binding domain LOS88_24210 IPR011005 Dihydropteroate synthase-like LOS88_24210 IPR006390 Dihydropteroate synthase LOS88_24215 IPR016181 Acyl-CoA N-acyltransferase LOS88_24225 IPR036397 Ribonuclease H superfamily LOS88_24225 IPR012337 Ribonuclease H-like superfamily LOS88_24225 IPR001584 Integrase, catalytic core LOS88_24225 IPR032874 DDE domain LOS88_24240 IPR002559 Transposase, IS4-like LOS88_24240 IPR012337 Ribonuclease H-like superfamily LOS88_24280 IPR009241 Toxin HigB-like LOS88_24295 IPR009744 VirC1 LOS88_24295 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_24320 IPR006120 Resolvase, HTH domain LOS88_24320 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LOS88_24320 IPR006119 Resolvase, N-terminal catalytic domain LOS88_24320 IPR006118 Recombinase, conserved site LOS88_24320 IPR009057 Homeobox-like domain superfamily LOS88_24335 IPR002513 Tn3 transposase DDE domain LOS88_24335 IPR025296 Domain of unknown function DUF4158 LOS88_24345 IPR017969 Heavy-metal-associated, conserved site LOS88_24345 IPR006121 Heavy metal-associated domain, HMA LOS88_24345 IPR036163 Heavy metal-associated domain superfamily LOS88_24345 IPR011795 Mercuric transport protein periplasmic component LOS88_24355 IPR003346 Transposase, IS116/IS110/IS902 LOS88_24355 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal LOS88_24365 IPR000551 MerR-type HTH domain LOS88_24365 IPR011794 Hg(II)-responsive transcriptional regulator LOS88_24365 IPR015358 Transcription regulator MerR, DNA binding LOS88_24365 IPR009061 Putative DNA-binding domain superfamily LOS88_24380 IPR013520 Exonuclease, RNase T/DNA polymerase III LOS88_24380 IPR000014 PAS domain LOS88_24380 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain LOS88_24380 IPR012337 Ribonuclease H-like superfamily LOS88_24380 IPR036397 Ribonuclease H superfamily LOS88_24380 IPR035965 PAS domain superfamily LOS88_24395 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LOS88_24395 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_24410 IPR005094 Endonuclease relaxase, MobA/VirD2 LOS88_24460 IPR012338 Beta-lactamase/transpeptidase-like LOS88_24460 IPR000871 Beta-lactamase, class-A LOS88_24465 IPR000871 Beta-lactamase, class-A LOS88_24465 IPR023650 Beta-lactamase, class-A active site LOS88_24465 IPR012338 Beta-lactamase/transpeptidase-like LOS88_24495 IPR002575 Aminoglycoside phosphotransferase LOS88_24495 IPR011009 Protein kinase-like domain superfamily LOS88_24500 IPR032874 DDE domain LOS88_24500 IPR001584 Integrase, catalytic core LOS88_24500 IPR012337 Ribonuclease H-like superfamily LOS88_24500 IPR036397 Ribonuclease H superfamily LOS88_24515 IPR025669 AAA domain LOS88_24515 IPR000551 MerR-type HTH domain LOS88_24515 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_24515 IPR017818 Plasmid partitioning protein, RepA LOS88_24515 IPR009061 Putative DNA-binding domain superfamily LOS88_24535 IPR027417 P-loop containing nucleoside triphosphate hydrolase LOS88_24535 IPR038724 Regulatory protein RepA LOS88_24565 IPR003660 HAMP domain LOS88_24565 IPR013655 PAS fold-3 LOS88_24565 IPR035965 PAS domain superfamily LOS88_24565 IPR000014 PAS domain LOS88_24565 IPR004090 Chemotaxis methyl-accepting receptor LOS88_24565 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_24565 IPR001610 PAC motif LOS88_24585 IPR004090 Chemotaxis methyl-accepting receptor LOS88_24585 IPR003660 HAMP domain LOS88_24585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LOS88_24605 IPR006922 Mobilization protein MbeB-like LOS88_24620 IPR008687 Bacterial mobilisation LOS88_24635 IPR006983 MbeD/MobD-like LOS88_24645 IPR036397 Ribonuclease H superfamily LOS88_24645 IPR012337 Ribonuclease H-like superfamily LOS88_24645 IPR001584 Integrase, catalytic core LOS88_24645 IPR009057 Homeobox-like domain superfamily LOS88_24645 IPR001598 Transposase, IS30, conserved site LOS88_24680 IPR008687 Bacterial mobilisation LOS88_24685 IPR005094 Endonuclease relaxase, MobA/VirD2