locus-tag class description M001_000005 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000005 IPR010921 Trp repressor/replication initiator M001_000005 IPR038454 DnaA, N-terminal domain superfamily M001_000005 IPR024633 DnaA N-terminal domain M001_000005 IPR013159 Chromosomal replication initiator, DnaA C-terminal M001_000005 IPR013317 Chromosomal replication initiator protein DnaA M001_000005 IPR020591 Chromosomal replication control, initiator DnaA-like M001_000005 IPR001957 Chromosomal replication control, initiator DnaA M001_000005 IPR003593 AAA+ ATPase domain M001_000005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site M001_000010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal M001_000010 IPR001001 DNA polymerase III, beta sliding clamp M001_000010 IPR022637 DNA polymerase III, beta sliding clamp, central M001_000010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal M001_000015 IPR042174 DNA-binding RecF, domain 2 M001_000015 IPR018078 DNA-binding, RecF, conserved site M001_000015 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000015 IPR003395 RecF/RecN/SMC, N-terminal M001_000015 IPR001238 DNA-binding, RecF M001_000020 IPR018522 DNA topoisomerase, type IIA, conserved site M001_000020 IPR020568 Ribosomal protein S5 domain 2-type fold M001_000020 IPR002288 DNA gyrase B subunit, C-terminal M001_000020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_000020 IPR001241 DNA topoisomerase, type IIA M001_000020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M001_000020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 M001_000020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal M001_000020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_000020 IPR003594 Histidine kinase/HSP90-like ATPase M001_000020 IPR041423 DNA gyrase subunit B insert domain M001_000020 IPR011557 DNA gyrase, subunit B M001_000020 IPR006171 TOPRIM domain M001_000020 IPR034160 DNA gyrase subunit B, TOPRIM domain M001_000030 IPR001034 DeoR-type HTH domain M001_000030 IPR036388 Winged helix-like DNA-binding domain superfamily M001_000030 IPR026881 WYL domain M001_000030 IPR013196 Helix-turn-helix, type 11 M001_000030 IPR036390 Winged helix DNA-binding domain superfamily M001_000030 IPR028349 Protein PafC M001_000035 IPR037923 Transcription regulator HTH-like M001_000035 IPR018062 HTH domain AraC-type, conserved site M001_000035 IPR018060 DNA binding HTH domain, AraC-type M001_000035 IPR003313 AraC-type arabinose-binding/dimerisation domain M001_000035 IPR009057 Homeobox-like domain superfamily M001_000035 IPR020449 Transcription regulator HTH, AraC- type M001_000040 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M001_000040 IPR001279 Metallo-beta-lactamase M001_000045 IPR023728 Small heat shock protein IbpA M001_000045 IPR008978 HSP20-like chaperone M001_000045 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain M001_000045 IPR002068 Alpha crystallin/Hsp20 domain M001_000050 IPR008978 HSP20-like chaperone M001_000050 IPR023728 Small heat shock protein IbpA M001_000050 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain M001_000050 IPR002068 Alpha crystallin/Hsp20 domain M001_000055 IPR015424 Pyridoxal phosphate-dependent transferase M001_000055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_000055 IPR004839 Aminotransferase, class I/classII M001_000070 IPR011701 Major facilitator superfamily M001_000070 IPR004812 Drug resistance transporter Bcr/CmlA subfamily M001_000070 IPR036259 MFS transporter superfamily M001_000070 IPR005829 Sugar transporter, conserved site M001_000070 IPR020846 Major facilitator superfamily domain M001_000075 IPR036388 Winged helix-like DNA-binding domain superfamily M001_000075 IPR001867 OmpR/PhoB-type DNA-binding domain M001_000075 IPR001789 Signal transduction response regulator, receiver domain M001_000075 IPR039420 Transcriptional regulatory protein WalR-like M001_000075 IPR011006 CheY-like superfamily M001_000080 IPR005467 Histidine kinase domain M001_000080 IPR003018 GAF domain M001_000080 IPR029016 GAF-like domain superfamily M001_000080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_000080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_000080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_000080 IPR003594 Histidine kinase/HSP90-like ATPase M001_000080 IPR038318 KdpD, transmembrane domain superfamily M001_000080 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal M001_000080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_000080 IPR025201 Sensor protein KdpD, transmembrane domain M001_000085 IPR003820 Potassium-transporting ATPase C chain M001_000090 IPR023299 P-type ATPase, cytoplasmic domain N M001_000090 IPR023214 HAD superfamily M001_000090 IPR018303 P-type ATPase, phosphorylation site M001_000090 IPR006391 P-type ATPase, B chain, subfamily IA M001_000090 IPR008250 P-type ATPase, A domain superfamily M001_000090 IPR023298 P-type ATPase, transmembrane domain superfamily M001_000090 IPR001757 P-type ATPase M001_000090 IPR036412 HAD-like superfamily M001_000095 IPR004623 Potassium-transporting ATPase A chain M001_000100 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M001_000100 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M001_000100 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_000100 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site M001_000100 IPR036188 FAD/NAD(P)-binding domain superfamily M001_000100 IPR023753 FAD/NAD(P)-binding domain M001_000100 IPR006322 Glutathione reductase, eukaryote/bacterial M001_000105 IPR003594 Histidine kinase/HSP90-like ATPase M001_000105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_000105 IPR005467 Histidine kinase domain M001_000105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_000105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_000105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_000105 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_000110 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_000110 IPR001036 Acriflavin resistance protein M001_000115 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_000115 IPR006143 RND efflux pump, membrane fusion protein M001_000120 IPR001647 DNA-binding HTH domain, TetR-type M001_000120 IPR009057 Homeobox-like domain superfamily M001_000120 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M001_000150 IPR000150 Cof family M001_000150 IPR036412 HAD-like superfamily M001_000150 IPR006379 HAD-superfamily hydrolase, subfamily IIB M001_000150 IPR023214 HAD superfamily M001_000155 IPR022742 Serine aminopeptidase, S33 M001_000155 IPR029058 Alpha/Beta hydrolase fold M001_000160 IPR001451 Hexapeptide repeat M001_000160 IPR018357 Hexapeptide transferase, conserved site M001_000160 IPR011004 Trimeric LpxA-like superfamily M001_000165 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M001_000165 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal M001_000165 IPR001537 tRNA/rRNA methyltransferase, SpoU type M001_000165 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase M001_000165 IPR029028 Alpha/beta knot methyltransferases M001_000170 IPR012676 TGS-like M001_000170 IPR004095 TGS M001_000170 IPR007685 RelA/SpoT M001_000170 IPR012675 Beta-grasp domain superfamily M001_000170 IPR002912 ACT domain M001_000170 IPR033655 RelA, TGS domain M001_000170 IPR004811 RelA/SpoT family M001_000170 IPR003607 HD/PDEase domain M001_000175 IPR036161 RPB6/omega subunit-like superfamily M001_000175 IPR003716 DNA-directed RNA polymerase, omega subunit M001_000175 IPR006110 RNA polymerase, subunit omega/K/RPB6 M001_000175 IPR012293 RNA polymerase subunit, RPB6/omega M001_000180 IPR008145 Guanylate kinase/L-type calcium channel beta subunit M001_000180 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000180 IPR008144 Guanylate kinase-like domain M001_000180 IPR017665 Guanylate kinase M001_000180 IPR020590 Guanylate kinase, conserved site M001_000185 IPR002201 Glycosyl transferase, family 9 M001_000190 IPR011009 Protein kinase-like domain superfamily M001_000190 IPR000719 Protein kinase domain M001_000190 IPR022826 3-deoxy-D-manno-octulosonic acid kinase M001_000200 IPR000620 EamA domain M001_000200 IPR004779 Carboxylate/Amino Acid/Amine Transporter M001_000220 IPR005119 LysR, substrate-binding M001_000220 IPR037416 Nodulation protein D, PBP2 M001_000220 IPR000847 Transcription regulator HTH, LysR M001_000220 IPR036388 Winged helix-like DNA-binding domain superfamily M001_000220 IPR036390 Winged helix DNA-binding domain superfamily M001_000225 IPR002306 Tryptophan-tRNA ligase M001_000225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_000225 IPR002305 Aminoacyl-tRNA synthetase, class Ic M001_000225 IPR024109 Tryptophan-tRNA ligase, bacterial-type M001_000225 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_000230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_000230 IPR006016 UspA M001_000230 IPR006015 Universal stress protein A family M001_000235 IPR024906 Enoyl reductase FAD binding domain M001_000235 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative M001_000235 IPR036291 NAD(P)-binding domain superfamily M001_000235 IPR010758 Trans-2-enoyl-CoA reductase M001_000240 IPR009078 Ferritin-like superfamily M001_000240 IPR008331 Ferritin/DPS protein domain M001_000240 IPR041719 Ferritin, prokaryotic-type M001_000240 IPR001519 Ferritin M001_000240 IPR012347 Ferritin-like M001_000240 IPR009040 Ferritin-like diiron domain M001_000245 IPR036188 FAD/NAD(P)-binding domain superfamily M001_000245 IPR023166 HI0933-like insert domain superfamily M001_000245 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like M001_000250 IPR003594 Histidine kinase/HSP90-like ATPase M001_000250 IPR029016 GAF-like domain superfamily M001_000250 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region M001_000250 IPR010559 Signal transduction histidine kinase, internal region M001_000250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_000255 IPR011006 CheY-like superfamily M001_000255 IPR001789 Signal transduction response regulator, receiver domain M001_000255 IPR007492 LytTR DNA-binding domain M001_000260 IPR011701 Major facilitator superfamily M001_000260 IPR004741 Oxalate/formate antiporter family transporter M001_000260 IPR020846 Major facilitator superfamily domain M001_000260 IPR036259 MFS transporter superfamily M001_000265 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like M001_000265 IPR036188 FAD/NAD(P)-binding domain superfamily M001_000265 IPR023166 HI0933-like insert domain superfamily M001_000285 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M001_000295 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_000295 IPR006143 RND efflux pump, membrane fusion protein M001_000300 IPR011761 ATP-grasp fold M001_000300 IPR011054 Rudiment single hybrid motif M001_000300 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain M001_000300 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit M001_000300 IPR016185 Pre-ATP-grasp domain superfamily M001_000300 IPR013815 ATP-grasp fold, subdomain 1 M001_000300 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M001_000305 IPR024694 PurE, prokaryotic type M001_000305 IPR035893 PurE domain superfamily M001_000305 IPR033747 Class I PurE M001_000305 IPR000031 PurE domain M001_000320 IPR000847 Transcription regulator HTH, LysR M001_000320 IPR036388 Winged helix-like DNA-binding domain superfamily M001_000320 IPR036390 Winged helix DNA-binding domain superfamily M001_000320 IPR005119 LysR, substrate-binding M001_000325 IPR010101 TonB-dependent vitamin B12 transporter BtuB M001_000325 IPR010917 TonB-dependent receptor, conserved site M001_000325 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M001_000325 IPR000531 TonB-dependent receptor-like, beta-barrel M001_000325 IPR037066 TonB-dependent receptor, plug domain superfamily M001_000325 IPR012910 TonB-dependent receptor, plug domain M001_000325 IPR039426 Vitamin B12 transporter BtuB-like M001_000330 IPR033134 Asp/Glu racemase, active site 2 M001_000330 IPR018187 Asp/Glu racemase, active site 1 M001_000330 IPR001920 Asp/Glu racemase M001_000330 IPR015942 Asp/Glu/hydantoin racemase M001_000330 IPR004391 Glutamate racemase M001_000365 IPR000594 THIF-type NAD/FAD binding fold M001_000365 IPR035985 Ubiquitin-activating enzyme M001_000370 IPR003808 Fe-S metabolism associated domain, SufE-like M001_000370 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE M001_000375 IPR000192 Aminotransferase class V domain M001_000375 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA M001_000375 IPR016454 Cysteine desulfurase M001_000375 IPR015424 Pyridoxal phosphate-dependent transferase M001_000375 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_000375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_000375 IPR010970 Cysteine desulfurase, SufS M001_000380 IPR014017 UvrD-like DNA helicase, C-terminal M001_000380 IPR013986 DExx box DNA helicase domain superfamily M001_000380 IPR000212 DNA helicase, UvrD/REP type M001_000380 IPR005752 ATP-dependent DNA helicase Rep M001_000380 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000380 IPR014016 UvrD-like helicase, ATP-binding domain M001_000380 IPR034739 UvrD/AddA helicase, N-terminal M001_000385 IPR005330 MHYT domain M001_000385 IPR000160 GGDEF domain M001_000385 IPR035919 EAL domain superfamily M001_000385 IPR029787 Nucleotide cyclase M001_000385 IPR001633 EAL domain M001_000390 IPR002323 Cytochrome c, class IE M001_000390 IPR036909 Cytochrome c-like domain superfamily M001_000390 IPR009056 Cytochrome c-like domain M001_000395 IPR011032 GroES-like superfamily M001_000395 IPR004627 L-threonine 3-dehydrogenase M001_000395 IPR036291 NAD(P)-binding domain superfamily M001_000395 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site M001_000395 IPR013154 Alcohol dehydrogenase, N-terminal M001_000395 IPR013149 Alcohol dehydrogenase, C-terminal M001_000395 IPR020843 Polyketide synthase, enoylreductase domain M001_000400 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site M001_000400 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase M001_000400 IPR015424 Pyridoxal phosphate-dependent transferase M001_000400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_000400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_000400 IPR004839 Aminotransferase, class I/classII M001_000405 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M001_000405 IPR009057 Homeobox-like domain superfamily M001_000405 IPR001647 DNA-binding HTH domain, TetR-type M001_000405 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M001_000405 IPR013571 Transcription regulator QacR, C-terminal M001_000410 IPR036291 NAD(P)-binding domain superfamily M001_000410 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase M001_000410 IPR001509 NAD-dependent epimerase/dehydratase M001_000415 IPR001296 Glycosyl transferase, family 1 M001_000425 IPR007016 O-antigen ligase-related M001_000430 IPR002654 Glycosyl transferase, family 25 M001_000460 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal M001_000460 IPR009057 Homeobox-like domain superfamily M001_000460 IPR018060 DNA binding HTH domain, AraC-type M001_000465 IPR001123 Amino acid exporter protein, LeuE-type M001_000465 IPR004778 Homoserine/Threonine efflux protein M001_000490 IPR017704 Putative selenium-binding protein YdfZ M001_000500 IPR005702 Exopolysaccharide synthesis protein M001_000500 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000500 IPR025669 AAA domain M001_000510 IPR034739 UvrD/AddA helicase, N-terminal M001_000510 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000510 IPR013986 DExx box DNA helicase domain superfamily M001_000510 IPR014017 UvrD-like DNA helicase, C-terminal M001_000510 IPR005753 DNA helicase, ATP-dependent, UvrD type M001_000510 IPR000212 DNA helicase, UvrD/REP type M001_000510 IPR014016 UvrD-like helicase, ATP-binding domain M001_000535 IPR029052 Metallo-dependent phosphatase-like M001_000535 IPR019931 LPXTG cell wall anchor domain M001_000535 IPR041827 CpdB, N-terminal metallophosphatase domain M001_000535 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M001_000535 IPR006179 5'-Nucleotidase/apyrase M001_000535 IPR006146 5'-Nucleotidase, conserved site M001_000535 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M001_000535 IPR008334 5'-Nucleotidase, C-terminal M001_000545 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily M001_000545 IPR006667 SLC41 divalent cation transporters, integral membrane domain M001_000545 IPR006669 Magnesium transporter MgtE M001_000545 IPR038048 Magnesium transporter MgtE, transmembrane domain M001_000545 IPR038076 MgtE, N-terminal domain superfamily M001_000545 IPR000644 CBS domain M001_000545 IPR006668 Magnesium transporter, MgtE intracellular domain M001_000550 IPR006367 Sirohaem synthase, N-terminal M001_000550 IPR000878 Tetrapyrrole methylase M001_000550 IPR035996 Tetrapyrrole methylase superfamily M001_000550 IPR014776 Tetrapyrrole methylase, subdomain 2 M001_000550 IPR006366 Uroporphyrin-III C-methyltransferase M001_000550 IPR036291 NAD(P)-binding domain superfamily M001_000550 IPR014777 Tetrapyrrole methylase, subdomain 1 M001_000550 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site M001_000550 IPR037115 Sirohaem synthase, dimerisation domain superfamily M001_000550 IPR012409 Sirohaem synthase M001_000550 IPR028281 Siroheme synthase, central domain M001_000550 IPR019478 Sirohaem synthase, dimerisation domain M001_000555 IPR024002 Formate/nitrite transporter, conserved site M001_000555 IPR000292 Formate/nitrite transporter M001_000555 IPR023271 Aquaporin-like M001_000560 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily M001_000560 IPR017881 Nitrite reductase (NADH) small subunit M001_000560 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type M001_000565 IPR017121 Nitrite reductase [NAD(P)H], large subunit M001_000565 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain M001_000565 IPR007419 BFD-like [2Fe-2S]-binding domain M001_000565 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily M001_000565 IPR036188 FAD/NAD(P)-binding domain superfamily M001_000565 IPR023753 FAD/NAD(P)-binding domain M001_000565 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain M001_000565 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily M001_000565 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB M001_000565 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal M001_000565 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site M001_000570 IPR003959 ATPase, AAA-type, core M001_000570 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000570 IPR004491 Heat shock protein HslU M001_000570 IPR003593 AAA+ ATPase domain M001_000570 IPR019489 Clp ATPase, C-terminal M001_000575 IPR001353 Proteasome, subunit alpha/beta M001_000575 IPR023333 Proteasome B-type subunit M001_000575 IPR029055 Nucleophile aminohydrolases, N-terminal M001_000575 IPR022281 ATP-dependent protease, HslV subunit M001_000585 IPR001278 Arginine-tRNA ligase M001_000585 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M001_000585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_000585 IPR008909 DALR anticodon binding M001_000585 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_000585 IPR035684 Arginyl-tRNA synthetase, catalytic core domain M001_000585 IPR005148 Arginyl tRNA synthetase N-terminal domain M001_000585 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily M001_000595 IPR013325 RNA polymerase sigma factor, region 2 M001_000595 IPR007630 RNA polymerase sigma-70 region 4 M001_000595 IPR007627 RNA polymerase sigma-70 region 2 M001_000595 IPR014284 RNA polymerase sigma-70 like domain M001_000595 IPR039425 RNA polymerase sigma-70 like M001_000595 IPR036388 Winged helix-like DNA-binding domain superfamily M001_000595 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_000605 IPR003824 Undecaprenyl-diphosphatase UppP M001_000610 IPR013458 Aldose 1-epimerase, bacterial M001_000610 IPR015443 Aldose 1-epimerase M001_000610 IPR018052 Aldose 1-epimerase, conserved site M001_000610 IPR011013 Galactose mutarotase-like domain superfamily M001_000610 IPR014718 Glycoside hydrolase-type carbohydrate-binding M001_000610 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase M001_000615 IPR019539 Galactokinase galactose-binding domain M001_000615 IPR019741 Galactokinase, conserved site M001_000615 IPR022963 Galactokinase, bacterial M001_000615 IPR000705 Galactokinase M001_000615 IPR006204 GHMP kinase N-terminal domain M001_000615 IPR006203 GHMP kinase, ATP-binding, conserved site M001_000615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_000615 IPR036554 GHMP kinase, C-terminal domain superfamily M001_000615 IPR006206 Mevalonate/galactokinase M001_000615 IPR013750 GHMP kinase, C-terminal domain M001_000615 IPR020568 Ribosomal protein S5 domain 2-type fold M001_000620 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal M001_000620 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal M001_000620 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site M001_000620 IPR001937 Galactose-1-phosphate uridyl transferase, class I M001_000620 IPR036265 HIT-like superfamily M001_000625 IPR016040 NAD(P)-binding domain M001_000625 IPR036291 NAD(P)-binding domain superfamily M001_000625 IPR005886 UDP-glucose 4-epimerase M001_000630 IPR000843 LacI-type HTH domain M001_000630 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_000630 IPR028082 Periplasmic binding protein-like I M001_000635 IPR004199 Beta galactosidase small chain/ domain 5 M001_000635 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M001_000635 IPR013783 Immunoglobulin-like fold M001_000635 IPR017853 Glycoside hydrolase superfamily M001_000635 IPR006104 Glycosyl hydrolases family 2, sugar binding domain M001_000635 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich M001_000635 IPR023230 Glycoside hydrolase, family 2, conserved site M001_000635 IPR006103 Glycoside hydrolase family 2, catalytic domain M001_000635 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase M001_000635 IPR006101 Glycoside hydrolase, family 2 M001_000635 IPR014718 Glycoside hydrolase-type carbohydrate-binding M001_000635 IPR008979 Galactose-binding-like domain superfamily M001_000635 IPR011013 Galactose mutarotase-like domain superfamily M001_000635 IPR032312 Beta-galactosidase, domain 4 M001_000640 IPR025997 Periplasmic binding protein M001_000640 IPR028082 Periplasmic binding protein-like I M001_000645 IPR003593 AAA+ ATPase domain M001_000645 IPR003439 ABC transporter-like M001_000645 IPR015862 ABC transporter, galactose import, MglA M001_000645 IPR017871 ABC transporter, conserved site M001_000645 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000650 IPR001851 ABC transporter, permease M001_000650 IPR030158 Galactoside transport system permease protein MglC M001_000655 IPR033479 Double Cache domain 1 M001_000655 IPR004090 Chemotaxis methyl-accepting receptor M001_000655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_000655 IPR029151 Periplasmic sensor-like domain superfamily M001_000655 IPR000727 Target SNARE coiled-coil homology domain M001_000655 IPR003660 HAMP domain M001_000660 IPR030390 RNA methyltransferase TrmA, active site M001_000660 IPR030391 RNA methyltransferase TrmA, conserved site M001_000660 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA M001_000660 IPR010280 (Uracil-5)-methyltransferase family M001_000660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_000675 IPR017069 Maltodextrin glucosidase M001_000675 IPR014756 Immunoglobulin E-set M001_000675 IPR017853 Glycoside hydrolase superfamily M001_000675 IPR013780 Glycosyl hydrolase, all-beta M001_000675 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain M001_000675 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_000690 IPR018181 Heat shock protein 70, conserved site M001_000690 IPR013126 Heat shock protein 70 family M001_000690 IPR042054 YegD-like M001_000695 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M001_000695 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_000695 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M001_000695 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M001_000695 IPR036291 NAD(P)-binding domain superfamily M001_000700 IPR010292 Uncharacterised protein family CreA M001_000715 IPR020458 Zinc finger, DksA/TraR C4-type conserved site M001_000715 IPR000962 Zinc finger, DksA/TraR C4-type M001_000715 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M001_000715 IPR037187 DksA, N-terminal domain superfamily M001_000715 IPR012784 RNA polymerase-binding transcription factor DksA M001_000720 IPR027303 Glutamine synthetase, glycine-rich site M001_000720 IPR008146 Glutamine synthetase, catalytic domain M001_000720 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain M001_000720 IPR036651 Glutamine synthetase, N-terminal domain superfamily M001_000725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_000725 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_000725 IPR015424 Pyridoxal phosphate-dependent transferase M001_000725 IPR005814 Aminotransferase class-III M001_000730 IPR006059 Bacterial extracellular solute-binding protein M001_000730 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein M001_000735 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein M001_000735 IPR006059 Bacterial extracellular solute-binding protein M001_000740 IPR003439 ABC transporter-like M001_000740 IPR013611 Transport-associated OB, type 2 M001_000740 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit M001_000740 IPR003593 AAA+ ATPase domain M001_000740 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000740 IPR017871 ABC transporter, conserved site M001_000740 IPR008995 Molybdate/tungstate binding, C-terminal M001_000745 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_000745 IPR035906 MetI-like superfamily M001_000750 IPR035906 MetI-like superfamily M001_000750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_000755 IPR005302 Molybdenum cofactor sulfurase, C-terminal M001_000755 IPR005163 3-alpha domain M001_000755 IPR011037 Pyruvate kinase-like, insert domain superfamily M001_000770 IPR006683 Thioesterase domain M001_000770 IPR029069 HotDog domain superfamily M001_000770 IPR003736 Phenylacetic acid degradation-related domain M001_000775 IPR001650 Helicase, C-terminal M001_000775 IPR011545 DEAD/DEAH box helicase domain M001_000775 IPR004589 DNA helicase, ATP-dependent, RecQ type M001_000775 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial M001_000775 IPR036388 Winged helix-like DNA-binding domain superfamily M001_000775 IPR018982 RQC domain M001_000775 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M001_000775 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000775 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_000775 IPR002121 HRDC domain M001_000775 IPR010997 HRDC-like superfamily M001_000780 IPR036909 Cytochrome c-like domain superfamily M001_000780 IPR009056 Cytochrome c-like domain M001_000785 IPR003846 Protein adenylyltransferase SelO M001_000795 IPR003744 Queuosine precursor transporter M001_000800 IPR010203 Regulator of ribonuclease activity A M001_000800 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria M001_000800 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M001_000800 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M001_000805 IPR003660 HAMP domain M001_000805 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_000805 IPR004090 Chemotaxis methyl-accepting receptor M001_000815 IPR042105 Ribosomal protein L31 superfamily M001_000815 IPR027491 Ribosomal protein L31 type A M001_000815 IPR002150 Ribosomal protein L31 M001_000815 IPR034704 L28p-like M001_000820 IPR041222 Primosomal protein N', 3' DNA-binding domain M001_000820 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily M001_000820 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain M001_000820 IPR041236 Primosomal protein N, C-terminal domain M001_000820 IPR011545 DEAD/DEAH box helicase domain M001_000820 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_000820 IPR001650 Helicase, C-terminal M001_000820 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000820 IPR005259 Primosomal protein N' M001_000830 IPR036291 NAD(P)-binding domain superfamily M001_000830 IPR016040 NAD(P)-binding domain M001_000830 IPR021295 Protein of unknown function DUF2867 M001_000835 IPR013059 Tryptophan/tyrosine transporter M001_000835 IPR013061 Tryptophan/tryrosine permease, conserved site M001_000835 IPR018227 Amino acid/polyamine transporter 2 M001_000840 IPR001891 Malic oxidoreductase M001_000840 IPR012302 Malic enzyme, NAD-binding M001_000840 IPR012301 Malic enzyme, N-terminal domain M001_000840 IPR037062 Malic enzyme, N-terminal domain superfamily M001_000840 IPR036291 NAD(P)-binding domain superfamily M001_000840 IPR015884 Malic enzyme, conserved site M001_000845 IPR017039 Virulence factor BrkB M001_000845 IPR023679 Uncharacterised protein family UPF0761, bacterial M001_000850 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily M001_000850 IPR003732 D-aminoacyl-tRNA deacylase DTD M001_000855 IPR035246 Spermidine synthase, tetramerisation domain M001_000855 IPR030374 Polyamine biosynthesis domain M001_000855 IPR037163 Spermidine synthase, tetramerisation domain superfamily M001_000855 IPR030373 Polyamine biosynthesis domain, conserved site M001_000855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_000855 IPR001045 Spermidine/spermine synthases M001_000860 IPR016181 Acyl-CoA N-acyltransferase M001_000860 IPR000182 GNAT domain M001_000860 IPR029069 HotDog domain superfamily M001_000860 IPR012660 Thioesterase, putative M001_000870 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000870 IPR001650 Helicase, C-terminal M001_000870 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_000870 IPR033454 RecG, wedge domain M001_000870 IPR011545 DEAD/DEAH box helicase domain M001_000870 IPR004609 ATP-dependent DNA helicase RecG M001_000870 IPR012340 Nucleic acid-binding, OB-fold M001_000875 IPR016270 CDP-alcohol phosphatidyltransferase class-II family M001_000875 IPR025202 Phospholipase D-like domain M001_000875 IPR001736 Phospholipase D/Transphosphatidylase M001_000880 IPR003474 Gluconate transporter M001_000885 IPR031322 Shikimate kinase/gluconokinase M001_000885 IPR006001 Carbohydrate kinase, thermoresistant glucokinase M001_000885 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_000890 IPR037237 IlvD/EDD, N-terminal domain M001_000890 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site M001_000890 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase M001_000890 IPR042096 Dihydroxy-acid dehydratase, C-terminal M001_000890 IPR004786 6-phosphogluconate dehydratase M001_000895 IPR013785 Aldolase-type TIM barrel M001_000895 IPR000887 KDPG/KHG aldolase M001_000895 IPR031338 KDPG/KHG aldolase, active site 2 M001_000895 IPR031337 KDPG/KHG aldolase, active site 1 M001_000900 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_000900 IPR000843 LacI-type HTH domain M001_000900 IPR001761 Periplasmic binding protein/LacI sugar binding domain M001_000900 IPR028082 Periplasmic binding protein-like I M001_000910 IPR016047 Peptidase M23 M001_000910 IPR011055 Duplicated hybrid motif M001_000915 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_000915 IPR011258 BPG-independent PGAM, N-terminal M001_000915 IPR006124 Metalloenzyme M001_000915 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily M001_000915 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent M001_000920 IPR001763 Rhodanese-like domain M001_000920 IPR036873 Rhodanese-like domain superfamily M001_000925 IPR003708 Bacterial protein export chaperone SecB M001_000925 IPR035958 SecB-like superfamily M001_000930 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M001_000930 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_000930 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal M001_000930 IPR036291 NAD(P)-binding domain superfamily M001_000930 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal M001_000930 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent M001_000935 IPR034904 Fe-S cluster assembly domain superfamily M001_000935 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal M001_000935 IPR000361 FeS cluster biogenesis M001_000935 IPR035903 HesB-like domain superfamily M001_000935 IPR017726 Fe/S biogenesis protein NfuA M001_000940 IPR000836 Phosphoribosyltransferase domain M001_000940 IPR029057 Phosphoribosyltransferase-like M001_000940 IPR005222 Competence protein ComF M001_000945 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase M001_000945 IPR000073 Alpha/beta hydrolase fold-1 M001_000945 IPR029058 Alpha/Beta hydrolase fold M001_000965 IPR023319 Tex-like protein, HTH domain superfamily M001_000965 IPR041692 HHH domain 9 M001_000965 IPR012340 Nucleic acid-binding, OB-fold M001_000965 IPR012337 Ribonuclease H-like superfamily M001_000965 IPR023323 Tex-like domain superfamily M001_000965 IPR010994 RuvA domain 2-like M001_000965 IPR022967 RNA-binding domain, S1 M001_000965 IPR037027 YqgF/RNase H-like domain superfamily M001_000965 IPR006641 YqgF/RNase H-like domain M001_000965 IPR032639 Tex protein, YqgF-like domain M001_000965 IPR003029 S1 domain M001_000965 IPR018974 Tex-like protein, N-terminal M001_000970 IPR028624 Transcription elongation factor GreA/GreB M001_000970 IPR023459 Transcription elongation factor GreA/GreB family M001_000970 IPR018151 Transcription elongation factor, GreA/GreB, conserved site M001_000970 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal M001_000970 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily M001_000970 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal M001_000970 IPR006358 Transcription elongation factor GreB M001_000970 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily M001_000975 IPR011006 CheY-like superfamily M001_000975 IPR039420 Transcriptional regulatory protein WalR-like M001_000975 IPR036388 Winged helix-like DNA-binding domain superfamily M001_000975 IPR001789 Signal transduction response regulator, receiver domain M001_000975 IPR001867 OmpR/PhoB-type DNA-binding domain M001_000975 IPR016032 Signal transduction response regulator, C-terminal effector M001_000980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_000980 IPR005467 Histidine kinase domain M001_000980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_000980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_000980 IPR003660 HAMP domain M001_000980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_000980 IPR003594 Histidine kinase/HSP90-like ATPase M001_000990 IPR036838 Ribosomal protein S10 domain superfamily M001_000990 IPR027486 Ribosomal protein S10 domain M001_000990 IPR018268 Ribosomal protein S10, conserved site M001_000990 IPR001848 Ribosomal protein S10 M001_000995 IPR009000 Translation protein, beta-barrel domain superfamily M001_000995 IPR000597 Ribosomal protein L3 M001_000995 IPR019926 Ribosomal protein L3, conserved site M001_000995 IPR019927 Ribosomal protein L3, bacterial/organelle-type M001_001000 IPR013005 50S ribosomal protein uL4 M001_001000 IPR023574 Ribosomal protein L4 domain superfamily M001_001000 IPR002136 Ribosomal protein L4/L1e M001_001005 IPR012678 Ribosomal protein L23/L15e core domain superfamily M001_001005 IPR001014 Ribosomal protein L23/L25, conserved site M001_001005 IPR013025 Ribosomal protein L25/L23 M001_001005 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M001_001010 IPR002171 Ribosomal protein L2 M001_001010 IPR022669 Ribosomal protein L2, C-terminal M001_001010 IPR014726 Ribosomal protein L2, domain 3 M001_001010 IPR005880 Ribosomal protein L2, bacterial/organellar-type M001_001010 IPR014722 Ribosomal protein L2, domain 2 M001_001010 IPR012340 Nucleic acid-binding, OB-fold M001_001010 IPR022666 Ribosomal Proteins L2, RNA binding domain M001_001010 IPR008991 Translation protein SH3-like domain superfamily M001_001015 IPR023575 Ribosomal protein S19, superfamily M001_001015 IPR020934 Ribosomal protein S19 conserved site M001_001015 IPR002222 Ribosomal protein S19/S15 M001_001015 IPR005732 Ribosomal protein S19, bacterial-type M001_001020 IPR018260 Ribosomal protein L22/L17, conserved site M001_001020 IPR001063 Ribosomal protein L22/L17 M001_001020 IPR036394 Ribosomal protein L22/L17 superfamily M001_001020 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type M001_001025 IPR005704 Ribosomal protein S3, bacterial-type M001_001025 IPR036419 Ribosomal protein S3, C-terminal domain superfamily M001_001025 IPR001351 Ribosomal protein S3, C-terminal M001_001025 IPR004087 K Homology domain M001_001025 IPR004044 K Homology domain, type 2 M001_001025 IPR015946 K homology domain-like, alpha/beta M001_001025 IPR018280 Ribosomal protein S3, conserved site M001_001025 IPR009019 K homology domain superfamily, prokaryotic type M001_001030 IPR016180 Ribosomal protein L10e/L16 M001_001030 IPR036920 Ribosomal protein L10e/L16 superfamily M001_001030 IPR020798 Ribosomal protein L16, conserved site M001_001030 IPR000114 Ribosomal protein L16 M001_001035 IPR001854 Ribosomal protein L29/L35 M001_001035 IPR036049 Ribosomal protein L29/L35 superfamily M001_001035 IPR018254 Ribosomal protein L29, conserved site M001_001040 IPR012340 Nucleic acid-binding, OB-fold M001_001040 IPR019979 Ribosomal protein S17, conserved site M001_001040 IPR000266 Ribosomal protein S17/S11 M001_001040 IPR019984 30S ribosomal protein S17 M001_001045 IPR036853 Ribosomal protein L14 superfamily M001_001045 IPR019972 Ribosomal protein L14P, conserved site M001_001045 IPR000218 Ribosomal protein L14P M001_001045 IPR005745 Ribosomal protein L14P, bacterial-type M001_001050 IPR003256 Ribosomal protein L24 M001_001050 IPR005825 Ribosomal protein L24/L26, conserved site M001_001050 IPR041988 Ribosomal Protein L26/L24, KOW domain M001_001050 IPR008991 Translation protein SH3-like domain superfamily M001_001050 IPR005824 KOW M001_001050 IPR014722 Ribosomal protein L2, domain 2 M001_001055 IPR031310 Ribosomal protein L5, N-terminal M001_001055 IPR022803 Ribosomal protein L5 domain superfamily M001_001055 IPR002132 Ribosomal protein L5 M001_001055 IPR031309 Ribosomal protein L5, C-terminal M001_001055 IPR020930 Ribosomal protein L5, bacterial-type M001_001055 IPR020929 Ribosomal protein L5, conserved site M001_001060 IPR023036 Ribosomal protein S14, bacterial/plastid M001_001060 IPR018271 Ribosomal protein S14, conserved site M001_001060 IPR001209 Ribosomal protein S14 M001_001065 IPR000630 Ribosomal protein S8 M001_001065 IPR035987 Ribosomal protein S8 superfamily M001_001070 IPR019906 Ribosomal protein L6, bacterial-type M001_001070 IPR002358 Ribosomal protein L6, conserved site M001_001070 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily M001_001070 IPR020040 Ribosomal protein L6, alpha-beta domain M001_001070 IPR000702 Ribosomal protein L6 M001_001075 IPR004389 Ribosomal protein L18, bacterial-type M001_001075 IPR005484 Ribosomal protein L18 M001_001080 IPR020568 Ribosomal protein S5 domain 2-type fold M001_001080 IPR005324 Ribosomal protein S5, C-terminal M001_001080 IPR005712 Ribosomal protein S5, bacterial-type M001_001080 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_001080 IPR018192 Ribosomal protein S5, N-terminal, conserved site M001_001080 IPR013810 Ribosomal protein S5, N-terminal M001_001080 IPR000851 Ribosomal protein S5 M001_001085 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain M001_001085 IPR018038 Ribosomal protein L30, conserved site M001_001085 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily M001_001085 IPR005996 Ribosomal protein L30, bacterial-type M001_001090 IPR036227 Ribosomal L18e/L15P superfamily M001_001090 IPR021131 Ribosomal protein L18e/L15P M001_001090 IPR001196 Ribosomal protein L15, conserved site M001_001090 IPR005749 Ribosomal protein L15, bacterial-type M001_001090 IPR030878 Ribosomal protein L15 M001_001095 IPR030659 SecY conserved site M001_001095 IPR023201 SecY domain superfamily M001_001095 IPR026593 Protein translocase subunit SecY M001_001095 IPR002208 SecY/SEC61-alpha family M001_001100 IPR000473 Ribosomal protein L36 M001_001100 IPR035977 Ribosomal protein L36 superfamily M001_001105 IPR010979 Ribosomal protein S13-like, H2TH M001_001105 IPR027437 30s ribosomal protein S13, C-terminal M001_001105 IPR019980 Ribosomal protein S13, bacterial-type M001_001105 IPR018269 Ribosomal protein S13, conserved site M001_001105 IPR001892 Ribosomal protein S13 M001_001110 IPR036967 Ribosomal protein S11 superfamily M001_001110 IPR019981 Ribosomal protein S11, bacterial-type M001_001110 IPR001971 Ribosomal protein S11 M001_001110 IPR018102 Ribosomal S11, conserved site M001_001115 IPR018079 Ribosomal protein S4, conserved site M001_001115 IPR022801 Ribosomal protein S4/S9 M001_001115 IPR001912 Ribosomal protein S4/S9, N-terminal M001_001115 IPR002942 RNA-binding S4 domain M001_001115 IPR005709 Ribosomal protein S4, bacterial-type M001_001115 IPR036986 RNA-binding S4 domain superfamily M001_001120 IPR011260 RNA polymerase, alpha subunit, C-terminal M001_001120 IPR011262 DNA-directed RNA polymerase, insert domain M001_001120 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type M001_001120 IPR011773 DNA-directed RNA polymerase, alpha subunit M001_001120 IPR036603 RNA polymerase, RBP11-like subunit M001_001120 IPR036643 DNA-directed RNA polymerase, insert domain superfamily M001_001125 IPR000456 Ribosomal protein L17 M001_001125 IPR036373 Ribosomal protein L17 superfamily M001_001165 IPR000531 TonB-dependent receptor-like, beta-barrel M001_001165 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M001_001165 IPR012910 TonB-dependent receptor, plug domain M001_001165 IPR039426 Vitamin B12 transporter BtuB-like M001_001165 IPR037066 TonB-dependent receptor, plug domain superfamily M001_001165 IPR010917 TonB-dependent receptor, conserved site M001_001165 IPR010916 TonB box, conserved site M001_001170 IPR029787 Nucleotide cyclase M001_001170 IPR000160 GGDEF domain M001_001170 IPR033416 Periplasmic sensor domain CHASE7 M001_001175 IPR003594 Histidine kinase/HSP90-like ATPase M001_001175 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_001175 IPR005467 Histidine kinase domain M001_001175 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_001175 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_001175 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_001175 IPR003660 HAMP domain M001_001180 IPR036388 Winged helix-like DNA-binding domain superfamily M001_001180 IPR039420 Transcriptional regulatory protein WalR-like M001_001180 IPR001789 Signal transduction response regulator, receiver domain M001_001180 IPR001867 OmpR/PhoB-type DNA-binding domain M001_001180 IPR011006 CheY-like superfamily M001_001180 IPR016032 Signal transduction response regulator, C-terminal effector M001_001195 IPR036390 Winged helix DNA-binding domain superfamily M001_001195 IPR000847 Transcription regulator HTH, LysR M001_001195 IPR036388 Winged helix-like DNA-binding domain superfamily M001_001195 IPR005119 LysR, substrate-binding M001_001205 IPR011051 RmlC-like cupin domain superfamily M001_001205 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain M001_001205 IPR014710 RmlC-like jelly roll fold M001_001205 IPR003829 Pirin, N-terminal domain M001_001205 IPR012093 Pirin M001_001210 IPR032808 DoxX family M001_001215 IPR011335 Restriction endonuclease type II-like M001_001215 IPR013986 DExx box DNA helicase domain superfamily M001_001215 IPR041500 RecC, C-terminal M001_001215 IPR006697 RecBCD enzyme subunit RecC M001_001215 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001220 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001220 IPR011604 Exonuclease, phage-type/RecB, C-terminal M001_001220 IPR000212 DNA helicase, UvrD/REP type M001_001220 IPR011335 Restriction endonuclease type II-like M001_001220 IPR014016 UvrD-like helicase, ATP-binding domain M001_001220 IPR034739 UvrD/AddA helicase, N-terminal M001_001220 IPR004586 RecBCD enzyme subunit RecB M001_001220 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type M001_001220 IPR014017 UvrD-like DNA helicase, C-terminal M001_001225 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001225 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain M001_001225 IPR027785 UvrD-like helicase C-terminal domain M001_001225 IPR006344 RecBCD enzyme subunit RecD M001_001225 IPR003593 AAA+ ATPase domain M001_001240 IPR013656 PAS fold-4 M001_001240 IPR035965 PAS domain superfamily M001_001240 IPR029787 Nucleotide cyclase M001_001240 IPR000160 GGDEF domain M001_001240 IPR000014 PAS domain M001_001240 IPR000700 PAS-associated, C-terminal M001_001255 IPR036388 Winged helix-like DNA-binding domain superfamily M001_001255 IPR011663 UbiC transcription regulator-associated M001_001255 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M001_001255 IPR000524 Transcription regulator HTH, GntR M001_001255 IPR017722 Phosphonate utilization transcriptional regulator PhnR M001_001255 IPR036390 Winged helix DNA-binding domain superfamily M001_001270 IPR035906 MetI-like superfamily M001_001270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_001280 IPR015853 ABC transporter, ferric cation import, FbpC M001_001280 IPR008995 Molybdate/tungstate binding, C-terminal M001_001280 IPR003593 AAA+ ATPase domain M001_001280 IPR003439 ABC transporter-like M001_001280 IPR017871 ABC transporter, conserved site M001_001280 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001280 IPR013611 Transport-associated OB, type 2 M001_001285 IPR036412 HAD-like superfamily M001_001285 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like M001_001285 IPR023214 HAD superfamily M001_001290 IPR009050 Globin-like superfamily M001_001290 IPR012292 Globin/Protoglobin M001_001290 IPR000160 GGDEF domain M001_001290 IPR039435 Diguanylate cyclase DosC, globin sensor domain M001_001290 IPR029787 Nucleotide cyclase M001_001310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_001310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_001310 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase M001_001310 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme M001_001310 IPR015424 Pyridoxal phosphate-dependent transferase M001_001320 IPR000914 Solute-binding protein family 5 domain M001_001320 IPR039424 Solute-binding protein family 5 M001_001320 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M001_001320 IPR023767 Transcriptional regulator SgrR M001_001320 IPR036390 Winged helix DNA-binding domain superfamily M001_001325 IPR019794 Peroxidase, active site M001_001325 IPR010255 Haem peroxidase superfamily M001_001325 IPR002016 Haem peroxidase M001_001325 IPR000763 Catalase-peroxidase haem M001_001340 IPR004961 Lipase chaperone M001_001345 IPR000073 Alpha/beta hydrolase fold-1 M001_001345 IPR029058 Alpha/Beta hydrolase fold M001_001350 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 M001_001350 IPR024088 Tyrosine-tRNA ligase, bacterial-type M001_001350 IPR002307 Tyrosine-tRNA ligase M001_001350 IPR002942 RNA-binding S4 domain M001_001350 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_001350 IPR036986 RNA-binding S4 domain superfamily M001_001350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_001350 IPR002305 Aminoacyl-tRNA synthetase, class Ic M001_001355 IPR036388 Winged helix-like DNA-binding domain superfamily M001_001355 IPR000792 Transcription regulator LuxR, C-terminal M001_001355 IPR016032 Signal transduction response regulator, C-terminal effector M001_001375 IPR024708 Catalase active site M001_001375 IPR011614 Catalase core domain M001_001375 IPR018028 Catalase, mono-functional, haem-containing M001_001375 IPR020835 Catalase superfamily M001_001375 IPR010582 Catalase immune-responsive domain M001_001375 IPR002226 Catalase haem-binding site M001_001375 IPR037060 Catalase core domain superfamily M001_001375 IPR040333 Catalase, clade 3 M001_001375 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 M001_001400 IPR033705 Valyl tRNA synthetase, anticodon-binding domain M001_001400 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M001_001400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_001400 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M001_001400 IPR002300 Aminoacyl-tRNA synthetase, class Ia M001_001400 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_001400 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily M001_001400 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M001_001400 IPR002303 Valine-tRNA ligase M001_001400 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm M001_001400 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M001_001410 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B M001_001410 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal M001_001410 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal M001_001410 IPR023042 Peptidase M17, leucine aminopeptidase M001_001415 IPR005495 Permease LptG/LptF-related M001_001415 IPR030922 LPS export ABC transporter permease LptF M001_001420 IPR005495 Permease LptG/LptF-related M001_001420 IPR030923 LPS export ABC transporter permease LptG M001_001440 IPR000531 TonB-dependent receptor-like, beta-barrel M001_001440 IPR039423 TonB-dependent receptor-like M001_001440 IPR012910 TonB-dependent receptor, plug domain M001_001440 IPR037066 TonB-dependent receptor, plug domain superfamily M001_001440 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M001_001440 IPR010105 TonB-dependent siderophore receptor M001_001450 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal M001_001450 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A M001_001450 IPR012338 Beta-lactamase/transpeptidase-like M001_001455 IPR002293 Amino acid/polyamine transporter I M001_001475 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase M001_001490 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX M001_001495 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily M001_001495 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase M001_001495 IPR039793 Uroporphyrinogen-III synthase M001_001500 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site M001_001500 IPR022418 Porphobilinogen deaminase, C-terminal M001_001500 IPR000860 Porphobilinogen deaminase M001_001500 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily M001_001500 IPR022417 Porphobilinogen deaminase, N-terminal M001_001505 IPR024686 Adenylate cyclase class-I, conserved site M001_001505 IPR000274 Adenylate cyclase, class-I M001_001505 IPR024685 Adenylate cyclase class-I, N-terminal domain M001_001510 IPR003140 Phospholipase/carboxylesterase/thioesterase M001_001510 IPR029058 Alpha/Beta hydrolase fold M001_001515 IPR020895 Frataxin conserved site M001_001515 IPR002908 Frataxin/CyaY M001_001515 IPR036524 Frataxin/CyaY superfamily M001_001525 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site M001_001525 IPR000183 Ornithine/DAP/Arg decarboxylase M001_001525 IPR029066 PLP-binding barrel M001_001525 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site M001_001525 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal M001_001525 IPR002986 Diaminopimelate decarboxylase, LysA M001_001525 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal M001_001525 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M001_001530 IPR001653 Diaminopimelate epimerase, DapF M001_001530 IPR018510 Diaminopimelate epimerase, active site M001_001540 IPR002104 Integrase, catalytic domain M001_001540 IPR010998 Integrase/recombinase, N-terminal M001_001540 IPR004107 Integrase, SAM-like, N-terminal M001_001540 IPR011931 Tyrosine recombinase XerC M001_001540 IPR013762 Integrase-like, catalytic domain superfamily M001_001540 IPR023009 Tyrosine recombinase XerC/XerD M001_001540 IPR011010 DNA breaking-rejoining enzyme, catalytic core M001_001545 IPR036412 HAD-like superfamily M001_001545 IPR041492 Haloacid dehalogenase-like hydrolase M001_001545 IPR006439 HAD hydrolase, subfamily IA M001_001545 IPR023214 HAD superfamily M001_001555 IPR036390 Winged helix DNA-binding domain superfamily M001_001555 IPR036388 Winged helix-like DNA-binding domain superfamily M001_001555 IPR018335 Transcription regulator HTH, Crp-type, conserved site M001_001555 IPR012318 Crp-type HTH domain M001_001555 IPR000595 Cyclic nucleotide-binding domain M001_001555 IPR018488 Cyclic nucleotide-binding, conserved site M001_001555 IPR018490 Cyclic nucleotide-binding-like M001_001555 IPR014710 RmlC-like jelly roll fold M001_001565 IPR029062 Class I glutamine amidotransferase-like M001_001565 IPR011697 Peptidase C26 M001_001565 IPR017926 Glutamine amidotransferase M001_001570 IPR006839 Ribosome-associated, YjgA M001_001570 IPR023153 PSPTO4464-like domain superfamily M001_001575 IPR035068 Metalloprotease TldD/PmbA, N-terminal M001_001575 IPR002510 Metalloprotease TldD/PmbA M001_001575 IPR036059 Metalloprotease TldD/PmbA superfamily M001_001580 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase M001_001580 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta M001_001580 IPR036968 Enolpyruvate transferase domain superfamily M001_001580 IPR001986 Enolpyruvate transferase domain M001_001585 IPR002634 BolA protein M001_001585 IPR036065 BolA-like superfamily M001_001595 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC M001_001595 IPR042245 Tgt2/MlaC superfamily M001_001600 IPR003399 Mce/MlaD M001_001600 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD M001_001605 IPR003453 ABC transport permease subunit MlaE, Proteobacteria M001_001605 IPR030802 ABC transporter permease MalE M001_001610 IPR003593 AAA+ ATPase domain M001_001610 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl M001_001610 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001610 IPR017871 ABC transporter, conserved site M001_001610 IPR003439 ABC transporter-like M001_001615 IPR000644 CBS domain M001_001615 IPR001347 Sugar isomerase (SIS) M001_001615 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type M001_001615 IPR035474 KpsF-like, SIS domain M001_001620 IPR036412 HAD-like superfamily M001_001620 IPR023214 HAD superfamily M001_001620 IPR010023 KdsC family M001_001625 IPR010664 Lipopolysaccharide assembly, LptC-related M001_001625 IPR026265 Lipopolysaccharide export system protein LptC M001_001630 IPR014340 Lipopolysaccharide export system protein LptA M001_001630 IPR005653 Organic solvent tolerance-like, N-terminal M001_001635 IPR030921 LPS export ABC transporter, ATP-binding protein LptB M001_001635 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001635 IPR003593 AAA+ ATPase domain M001_001635 IPR003439 ABC transporter-like M001_001635 IPR017871 ABC transporter, conserved site M001_001635 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal M001_001640 IPR007634 RNA polymerase sigma factor 54, DNA-binding M001_001640 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily M001_001640 IPR007046 RNA polymerase sigma factor 54, core-binding domain M001_001640 IPR000394 RNA polymerase sigma factor 54 M001_001645 IPR036567 Ribosome hibernation promotion factor-like M001_001645 IPR003489 Ribosome hibernation promoting factor/RaiA M001_001650 IPR002178 PTS EIIA type-2 domain M001_001650 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN M001_001650 IPR016152 Phosphotransferase/anion transporter M001_001655 IPR005337 RapZ-like family M001_001655 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001660 IPR000032 Phosphocarrier protein HPr-like M001_001660 IPR035895 HPr-like superfamily M001_001660 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M001_001660 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M001_001665 IPR013196 Helix-turn-helix, type 11 M001_001665 IPR036388 Winged helix-like DNA-binding domain superfamily M001_001665 IPR011608 PRD domain M001_001665 IPR036634 PRD domain superfamily M001_001665 IPR013011 Phosphotransferase system, EIIB component, type 2 M001_001665 IPR036095 PTS system IIB component-like superfamily M001_001665 IPR002178 PTS EIIA type-2 domain M001_001665 IPR016152 Phosphotransferase/anion transporter M001_001665 IPR007737 Mga helix-turn-helix domain M001_001670 IPR013785 Aldolase-type TIM barrel M001_001670 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase M001_001675 IPR018319 L-seryl-tRNA selenium transferase-like M001_001675 IPR015424 Pyridoxal phosphate-dependent transferase M001_001675 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like M001_001675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_001680 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_001680 IPR032466 Metal-dependent hydrolase M001_001680 IPR006680 Amidohydrolase-related M001_001680 IPR020043 Deacetylase Atu3266-like M001_001710 IPR001940 Peptidase S1C M001_001710 IPR001478 PDZ domain M001_001710 IPR011783 Peptidase S1C, DegS M001_001710 IPR009003 Peptidase S1, PA clan M001_001710 IPR036034 PDZ superfamily M001_001715 IPR011782 Peptidase S1C, Do M001_001715 IPR001478 PDZ domain M001_001715 IPR001940 Peptidase S1C M001_001715 IPR036034 PDZ superfamily M001_001715 IPR009003 Peptidase S1, PA clan M001_001725 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001725 IPR005654 ATPase, AFG1-like M001_001725 IPR030870 Cell division protein ZapE M001_001730 IPR005823 Ribosomal protein L13, bacterial-type M001_001730 IPR005822 Ribosomal protein L13 M001_001730 IPR036899 Ribosomal protein L13 superfamily M001_001730 IPR023563 Ribosomal protein L13, conserved site M001_001735 IPR020568 Ribosomal protein S5 domain 2-type fold M001_001735 IPR020574 Ribosomal protein S9, conserved site M001_001735 IPR023035 Ribosomal protein S9, bacterial/plastid M001_001735 IPR000754 Ribosomal protein S9 M001_001735 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_001740 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal M001_001740 IPR005805 Rieske iron-sulphur protein, C-terminal M001_001740 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit M001_001740 IPR017941 Rieske [2Fe-2S] iron-sulphur domain M001_001740 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily M001_001740 IPR014349 Rieske iron-sulphur protein M001_001745 IPR030689 Cytochrome b M001_001745 IPR005798 Cytochrome b/b6, C-terminal M001_001745 IPR036150 Cytochrome b/b6, C-terminal domain superfamily M001_001745 IPR005797 Cytochrome b/b6, N-terminal M001_001745 IPR027387 Cytochrome b/b6-like domain superfamily M001_001745 IPR016174 Di-haem cytochrome, transmembrane M001_001750 IPR036909 Cytochrome c-like domain superfamily M001_001750 IPR009056 Cytochrome c-like domain M001_001750 IPR002326 Cytochrome c1 M001_001755 IPR034341 Stringent starvation protein A, N-terminal M001_001755 IPR040079 Glutathione Transferase family M001_001755 IPR004046 Glutathione S-transferase, C-terminal M001_001755 IPR004045 Glutathione S-transferase, N-terminal M001_001755 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M001_001755 IPR010987 Glutathione S-transferase, C-terminal-like M001_001755 IPR036249 Thioredoxin-like superfamily M001_001760 IPR036760 SspB-like superfamily M001_001760 IPR007481 Stringent starvation protein B M001_001765 IPR014004 Transport-associated and nodulation domain, bacteria M001_001765 IPR007055 BON domain M001_001770 IPR004515 Phosphoheptose isomerase M001_001770 IPR001347 Sugar isomerase (SIS) M001_001770 IPR035461 GmhA/DiaA M001_001775 IPR003509 Uncharacterised protein family UPF0102 M001_001775 IPR011856 tRNA endonuclease-like domain superfamily M001_001775 IPR011335 Restriction endonuclease type II-like M001_001780 IPR011990 Tetratricopeptide-like helical domain superfamily M001_001780 IPR028082 Periplasmic binding protein-like I M001_001780 IPR007443 Penicillin-binding protein activator LpoA M001_001785 IPR014777 Tetrapyrrole methylase, subdomain 1 M001_001785 IPR014776 Tetrapyrrole methylase, subdomain 2 M001_001785 IPR008189 rRNA small subunit methyltransferase I M001_001785 IPR018063 SAM-dependent methyltransferase RsmI, conserved site M001_001785 IPR000878 Tetrapyrrole methylase M001_001785 IPR035996 Tetrapyrrole methylase superfamily M001_001800 IPR001543 Surface presentation of antigen (SpoA) M001_001800 IPR036429 SpoA-like superfamily M001_001800 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb M001_001800 IPR012826 Flagellar motor switch FliN M001_001805 IPR005838 Type III secretion system inner membrane P protein M001_001805 IPR005837 Flagellar transport protein FliP M001_001810 IPR006305 Flagellar biosynthesis protein FliQ M001_001810 IPR002191 Bacterial export protein family 3 M001_001815 IPR002010 Type III secretion system inner membrane R protein M001_001815 IPR006303 Flagellar biosynthesis protein FliR M001_001820 IPR006136 Flagellar biosynthetic protein FlhB M001_001820 IPR006135 Type III secretion system substrate exporter M001_001820 IPR029025 Type III secretion system substrate exporter, C-terminal M001_001825 IPR042193 FHIPEP, domain 3 M001_001825 IPR042194 FHIPEP, domain 1 M001_001825 IPR042196 FHIPEP, domain 4 M001_001825 IPR001712 Type III secretion system FHIPEP M001_001825 IPR006301 Flagellar biosynthesis protein FlhA M001_001825 IPR025505 FHIPEP conserved site M001_001830 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_001830 IPR029995 Transcriptional activator SfnR/FlbD M001_001830 IPR003593 AAA+ ATPase domain M001_001830 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_001830 IPR025944 Sigma-54 interaction domain, conserved site M001_001830 IPR009057 Homeobox-like domain superfamily M001_001830 IPR002197 DNA binding HTH domain, Fis-type M001_001830 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001830 IPR001789 Signal transduction response regulator, receiver domain M001_001830 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_001830 IPR011006 CheY-like superfamily M001_001835 IPR001624 Flagellar hook-basal body complex protein FliE M001_001840 IPR013556 Flagellar M-ring C-terminal M001_001840 IPR000067 Flagellar M-ring protein FliF M001_001840 IPR006182 Secretory protein YscJ/FliF M001_001845 IPR000090 Flagellar motor switch protein FliG M001_001845 IPR023087 Flagellar motor switch protein FliG, C-terminal M001_001845 IPR011002 Flagellar motor switch protein FliG, alpha-helical M001_001845 IPR032779 Flagellar motor switch protein FliG, middle domain M001_001845 IPR028263 Flagellar motor switch protein FliG, N-terminal domain M001_001855 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_001855 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M001_001855 IPR020005 Flagellar export ATPase FliI, clade 1 M001_001855 IPR003593 AAA+ ATPase domain M001_001855 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M001_001855 IPR040627 T3SS EscN ATPase, C-terminal M001_001855 IPR005714 ATPase, type III secretion system, FliI/YscN M001_001855 IPR032463 ATPase, type III secretion system, FliI M001_001880 IPR001444 Flagellar basal body rod protein, N-terminal M001_001880 IPR019776 Flagellar basal body rod protein, conserved site M001_001880 IPR006300 Flagellar basal-body rod protein FlgB M001_001885 IPR001444 Flagellar basal body rod protein, N-terminal M001_001885 IPR019776 Flagellar basal body rod protein, conserved site M001_001885 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_001885 IPR006299 Flagellar basal-body rod protein FlgC M001_001890 IPR025965 FlgD Ig-like domain M001_001890 IPR005648 Flagellar hook capping protein M001_001890 IPR025963 FlgD Tudor-like domain M001_001895 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M001_001895 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_001895 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M001_001895 IPR019776 Flagellar basal body rod protein, conserved site M001_001895 IPR001444 Flagellar basal body rod protein, N-terminal M001_001895 IPR037058 Flagellar hook protein FlgE superfamily M001_001895 IPR011491 Flagellar hook protein FlgE M001_001900 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M001_001900 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_001900 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M001_001900 IPR019776 Flagellar basal body rod protein, conserved site M001_001900 IPR001444 Flagellar basal body rod protein, N-terminal M001_001905 IPR001444 Flagellar basal body rod protein, N-terminal M001_001905 IPR019776 Flagellar basal body rod protein, conserved site M001_001905 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_001905 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M001_001905 IPR012834 Flagellar basal-body rod FlgG M001_001905 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M001_001910 IPR000527 Flagellar L-ring protein M001_001915 IPR001782 Flagellar P-ring protein M001_001925 IPR001444 Flagellar basal body rod protein, N-terminal M001_001925 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_001925 IPR002371 Flagellar hook-associated protein 1 M001_001925 IPR019776 Flagellar basal body rod protein, conserved site M001_001930 IPR001029 Flagellin, D0/D1 domain M001_001930 IPR013384 Flagellar hook-associated protein 3 M001_001950 IPR042187 Flagellin, C-terminal domain, subdomain 2 M001_001950 IPR001029 Flagellin, D0/D1 domain M001_001950 IPR001492 Flagellin M001_001955 IPR001492 Flagellin M001_001955 IPR042187 Flagellin, C-terminal domain, subdomain 2 M001_001955 IPR001029 Flagellin, D0/D1 domain M001_001960 IPR003481 Flagellar hook-associated protein 2, N-terminal M001_001960 IPR010809 Flagellar hook-associated protein 2, C-terminal M001_001960 IPR040026 Flagellar hook-associated protein 2 M001_001960 IPR010810 Flagellin hook, IN motif M001_001965 IPR003713 Flagellar protein FliS M001_001965 IPR036584 Flagellar protein FliS superfamily M001_001985 IPR007627 RNA polymerase sigma-70 region 2 M001_001985 IPR007630 RNA polymerase sigma-70 region 4 M001_001985 IPR012845 RNA polymerase sigma factor, FliA/WhiG M001_001985 IPR013325 RNA polymerase sigma factor, region 2 M001_001985 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_001985 IPR000943 RNA polymerase sigma-70 M001_001985 IPR014284 RNA polymerase sigma-70 like domain M001_001990 IPR002898 MotA/TolQ/ExbB proton channel M001_001990 IPR000540 Flagellar motor protein MotA, conserved site M001_001990 IPR022522 Flagellar motor stator, MotA M001_001995 IPR036737 OmpA-like domain superfamily M001_001995 IPR025713 Motility protein B, N-terminal domain M001_001995 IPR006665 OmpA-like domain M001_002005 IPR018392 LysM domain M001_002005 IPR036779 LysM domain superfamily M001_002005 IPR023346 Lysozyme-like domain superfamily M001_002005 IPR000189 Prokaryotic transglycosylase, active site M001_002005 IPR008258 Transglycosylase SLT domain 1 M001_002010 IPR007159 SpoVT-AbrB domain M001_002010 IPR038619 MraZ superfamily M001_002010 IPR035642 MraZ, N-terminal M001_002010 IPR020603 MraZ domain M001_002010 IPR035644 MraZ, C-terminal M001_002010 IPR037914 SpoVT-AbrB domain superfamily M001_002010 IPR003444 Transcriptional regulator MraZ M001_002015 IPR002903 Ribosomal RNA small subunit methyltransferase H M001_002015 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily M001_002015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_002020 IPR011922 Cell division protein FtsL M001_002025 IPR001460 Penicillin-binding protein, transpeptidase M001_002025 IPR036138 Penicillin-binding protein, dimerisation domain superfamily M001_002025 IPR005311 Penicillin-binding protein, dimerisation domain M001_002025 IPR037532 Peptidoglycan D,D-transpeptidase FtsI M001_002025 IPR012338 Beta-lactamase/transpeptidase-like M001_002030 IPR036565 Mur-like, catalytic domain superfamily M001_002030 IPR004101 Mur ligase, C-terminal M001_002030 IPR035911 MurE/MurF, N-terminal M001_002030 IPR013221 Mur ligase, central M001_002030 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase M001_002030 IPR036615 Mur ligase, C-terminal domain superfamily M001_002030 IPR000713 Mur ligase, N-terminal catalytic domain M001_002035 IPR036565 Mur-like, catalytic domain superfamily M001_002035 IPR004101 Mur ligase, C-terminal M001_002035 IPR000713 Mur ligase, N-terminal catalytic domain M001_002035 IPR035911 MurE/MurF, N-terminal M001_002035 IPR013221 Mur ligase, central M001_002035 IPR036615 Mur ligase, C-terminal domain superfamily M001_002035 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase M001_002040 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site M001_002040 IPR000715 Glycosyl transferase, family 4 M001_002040 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase M001_002045 IPR036565 Mur-like, catalytic domain superfamily M001_002045 IPR004101 Mur ligase, C-terminal M001_002045 IPR036615 Mur ligase, C-terminal domain superfamily M001_002045 IPR013221 Mur ligase, central M001_002045 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase M001_002050 IPR013437 Probable peptidoglycan glycosyltransferase FtsW M001_002050 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA M001_002050 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site M001_002055 IPR007235 Glycosyl transferase, family 28, C-terminal M001_002055 IPR004276 Glycosyltransferase family 28, N-terminal domain M001_002055 IPR006009 N-acetylglucosaminyltransferase, MurG M001_002060 IPR000713 Mur ligase, N-terminal catalytic domain M001_002060 IPR005758 UDP-N-acetylmuramate--L-alanine ligase M001_002060 IPR036565 Mur-like, catalytic domain superfamily M001_002060 IPR004101 Mur ligase, C-terminal M001_002060 IPR036615 Mur ligase, C-terminal domain superfamily M001_002060 IPR013221 Mur ligase, central M001_002065 IPR026579 Cell division protein FtsQ M001_002065 IPR034746 POTRA domain M001_002065 IPR013685 POTRA domain, FtsQ-type M001_002065 IPR005548 Cell division protein FtsQ/DivIB M001_002070 IPR003494 SHS2 domain inserted in FtsA M001_002070 IPR020823 Cell division protein FtsA M001_002075 IPR003008 Tubulin/FtsZ, GTPase domain M001_002075 IPR000158 Cell division protein FtsZ M001_002075 IPR020805 Cell division protein FtsZ, conserved site M001_002075 IPR024757 Cell division protein FtsZ, C-terminal M001_002075 IPR008280 Tubulin/FtsZ, C-terminal M001_002075 IPR036525 Tubulin/FtsZ, GTPase domain superfamily M001_002075 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain M001_002080 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal M001_002080 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal M001_002080 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase M001_002080 IPR020568 Ribosomal protein S5 domain 2-type fold M001_002090 IPR004027 SEC-C motif M001_002090 IPR011115 SecA DEAD-like, N-terminal M001_002090 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002090 IPR036670 SecA, preprotein cross-linking domain superfamily M001_002090 IPR036266 SecA, Wing/Scaffold superfamily M001_002090 IPR011116 SecA Wing/Scaffold M001_002090 IPR020937 SecA conserved site M001_002090 IPR000185 Protein translocase subunit SecA M001_002090 IPR014018 SecA motor DEAD M001_002090 IPR011130 SecA, preprotein cross-linking domain M001_002095 IPR022927 RNA pyrophosphohydrolase RppH M001_002095 IPR015797 NUDIX hydrolase-like domain superfamily M001_002095 IPR020084 NUDIX hydrolase, conserved site M001_002095 IPR000086 NUDIX hydrolase domain M001_002095 IPR020476 NUDIX hydrolase M001_002100 IPR013088 Zinc finger, NHR/GATA-type M001_002100 IPR005584 DNA gyrase inhibitor YacG M001_002105 IPR036268 ZapD domain superfamily M001_002105 IPR009777 Cell division protein ZapD M001_002105 IPR027462 Z ring-associated protein D, C-terminal M001_002110 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002110 IPR001977 Dephospho-CoA kinase M001_002115 IPR000045 Prepilin type IV endopeptidase, peptidase domain M001_002115 IPR014032 Peptidase A24A, prepilin type IV, bacterial M001_002115 IPR010627 Peptidase A24A, N-terminal M001_002120 IPR003004 GspF/PilC family M001_002120 IPR018076 Type II secretion system F domain M001_002120 IPR042094 Type II secretion system F domain superfamily M001_002120 IPR001992 Type II secretion system conserved site M001_002125 IPR037257 General secretory system II, protein E, N-terminal superfamily M001_002125 IPR013374 ATPase, type IV, pilus assembly, PilB M001_002125 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002125 IPR001482 Type II/IV secretion system protein M001_002125 IPR007831 General secretory system II, protein E, N-terminal M001_002125 IPR042181 Type II secretion system, protein E, N-terminal M001_002130 IPR012902 Prokaryotic N-terminal methylation site M001_002135 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily M001_002135 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal M001_002135 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD M001_002135 IPR004393 Nicotinate-nucleotide pyrophosphorylase M001_002135 IPR013785 Aldolase-type TIM barrel M001_002135 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal M001_002135 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal M001_002145 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily M001_002145 IPR002502 N-acetylmuramoyl-L-alanine amidase domain M001_002150 IPR000524 Transcription regulator HTH, GntR M001_002150 IPR011711 GntR, C-terminal M001_002150 IPR008920 Transcription regulator FadR/GntR, C-terminal M001_002150 IPR036388 Winged helix-like DNA-binding domain superfamily M001_002150 IPR036390 Winged helix DNA-binding domain superfamily M001_002155 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal M001_002155 IPR004660 Pyruvate dehydrogenase E1 component M001_002155 IPR041621 Pyruvate dehydrogenase E1 component, middle domain M001_002155 IPR029061 Thiamin diphosphate-binding fold M001_002155 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M001_002155 IPR005474 Transketolase, N-terminal M001_002160 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M001_002160 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M001_002160 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex M001_002160 IPR000089 Biotin/lipoyl attachment M001_002160 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain M001_002160 IPR004167 Peripheral subunit-binding domain M001_002160 IPR036625 E3-binding domain superfamily M001_002160 IPR011053 Single hybrid motif M001_002165 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M001_002165 IPR036188 FAD/NAD(P)-binding domain superfamily M001_002165 IPR006258 Dihydrolipoamide dehydrogenase M001_002165 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M001_002165 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_002165 IPR023753 FAD/NAD(P)-binding domain M001_002165 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site M001_002170 IPR001633 EAL domain M001_002170 IPR005330 MHYT domain M001_002170 IPR000160 GGDEF domain M001_002170 IPR029787 Nucleotide cyclase M001_002170 IPR035919 EAL domain superfamily M001_002175 IPR000727 Target SNARE coiled-coil homology domain M001_002175 IPR004090 Chemotaxis methyl-accepting receptor M001_002175 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M001_002175 IPR003660 HAMP domain M001_002175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_002180 IPR001423 Lysophospholipase patatin, conserved site M001_002180 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M001_002180 IPR002641 Patatin-like phospholipase domain M001_002185 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain M001_002185 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 M001_002185 IPR036008 Aconitase, iron-sulfur domain M001_002185 IPR004406 Aconitase B M001_002185 IPR015933 Aconitase B, HEAT-like domain M001_002185 IPR036288 Aconitase B, HEAT-like domain superfamily M001_002185 IPR015929 Aconitase B, swivel M001_002185 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel M001_002185 IPR018136 Aconitase family, 4Fe-4S cluster binding site M001_002185 IPR015932 Aconitase, domain 2 M001_002190 IPR001633 EAL domain M001_002190 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M001_002190 IPR035919 EAL domain superfamily M001_002200 IPR036627 CobW-like, C-terminal domain superfamily M001_002200 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002200 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal M001_002200 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M001_002205 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_002205 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA M001_002205 IPR001036 Acriflavin resistance protein M001_002220 IPR004638 Drug resistance transporter EmrB-like M001_002220 IPR011701 Major facilitator superfamily M001_002220 IPR036259 MFS transporter superfamily M001_002220 IPR023721 Multidrug resistance protein MdtD M001_002220 IPR020846 Major facilitator superfamily domain M001_002230 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK M001_002230 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily M001_002235 IPR006156 Dihydroneopterin aldolase M001_002235 IPR006157 Dihydroneopterin aldolase/epimerase domain M001_002240 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY M001_002290 IPR022761 Fumarate lyase, N-terminal M001_002290 IPR000362 Fumarate lyase family M001_002290 IPR020557 Fumarate lyase, conserved site M001_002290 IPR009049 Argininosuccinate lyase M001_002290 IPR029419 Argininosuccinate lyase, C-terminal M001_002290 IPR008948 L-Aspartase-like M001_002290 IPR024083 Fumarase/histidase, N-terminal M001_002295 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body M001_002295 IPR001518 Argininosuccinate synthase M001_002295 IPR018223 Argininosuccinate synthase, conserved site M001_002295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_002295 IPR023434 Argininosuccinate synthase, type 1 subfamily M001_002300 IPR002292 Ornithine/putrescine carbamoyltransferase M001_002300 IPR024904 Ornithine carbamoyltransferase M001_002300 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M001_002300 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M001_002300 IPR006130 Aspartate/ornithine carbamoyltransferase M001_002300 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M001_002305 IPR036393 Acetylglutamate kinase-like superfamily M001_002305 IPR001048 Aspartate/glutamate/uridylate kinase M001_002305 IPR004662 Acetylglutamate kinase family M001_002305 IPR037528 Acetylglutamate kinase ArgB M001_002310 IPR036291 NAD(P)-binding domain superfamily M001_002310 IPR000534 Semialdehyde dehydrogenase, NAD-binding M001_002310 IPR012280 Semialdehyde dehydrogenase, dimerisation domain M001_002310 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site M001_002310 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 M001_002315 IPR036264 Bacterial exopeptidase dimerisation domain M001_002315 IPR002933 Peptidase M20 M001_002315 IPR011650 Peptidase M20, dimerisation domain M001_002315 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M001_002315 IPR010169 Acetylornithine deacetylase ArgE M001_002320 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_002320 IPR021135 Phosphoenolpyruvate carboxylase M001_002320 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type M001_002320 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site M001_002320 IPR033129 Phosphoenolpyruvate carboxylase, His active site M001_002330 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC M001_002330 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily M001_002330 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain M001_002345 IPR005119 LysR, substrate-binding M001_002345 IPR000847 Transcription regulator HTH, LysR M001_002345 IPR036390 Winged helix DNA-binding domain superfamily M001_002345 IPR036388 Winged helix-like DNA-binding domain superfamily M001_002350 IPR005538 LrgA/CidA family M001_002350 IPR023760 Holin-like protein CidA M001_002355 IPR007300 CidB/LrgB family M001_002355 IPR005261 Conserved hypothetical protein CHP00659 M001_002365 IPR037483 YjjU-like M001_002365 IPR002641 Patatin-like phospholipase domain M001_002365 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M001_002370 IPR007696 DNA mismatch repair protein MutS, core M001_002370 IPR005748 DNA mismatch repair protein MutS M001_002370 IPR007695 DNA mismatch repair protein MutS-like, N-terminal M001_002370 IPR017261 DNA mismatch repair protein MutS/MSH M001_002370 IPR007861 DNA mismatch repair protein MutS, clamp M001_002370 IPR016151 DNA mismatch repair protein MutS, N-terminal M001_002370 IPR000432 DNA mismatch repair protein MutS, C-terminal M001_002370 IPR036678 MutS, connector domain superfamily M001_002370 IPR007860 DNA mismatch repair protein MutS, connector domain M001_002370 IPR036187 DNA mismatch repair protein MutS, core domain superfamily M001_002370 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002375 IPR008136 CinA, C-terminal M001_002375 IPR036653 CinA-like, C-terminal M001_002380 IPR003593 AAA+ ATPase domain M001_002380 IPR013765 DNA recombination and repair protein RecA M001_002380 IPR020584 DNA recombination/repair protein RecA, conserved site M001_002380 IPR023400 DNA recombination and repair protein RecA, C-terminal M001_002380 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface M001_002380 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002380 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain M001_002385 IPR003783 Regulatory protein RecX M001_002385 IPR036388 Winged helix-like DNA-binding domain superfamily M001_002390 IPR003156 DHHA1 domain M001_002390 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain M001_002390 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal M001_002390 IPR012947 Threonyl/alanyl tRNA synthetase, SAD M001_002390 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily M001_002390 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria M001_002390 IPR009000 Translation protein, beta-barrel domain superfamily M001_002390 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily M001_002390 IPR002318 Alanine-tRNA ligase, class IIc M001_002395 IPR036393 Acetylglutamate kinase-like superfamily M001_002395 IPR018042 Aspartate kinase, conserved site M001_002395 IPR002912 ACT domain M001_002395 IPR001048 Aspartate/glutamate/uridylate kinase M001_002395 IPR005260 Aspartate kinase, monofunctional class M001_002395 IPR027795 CASTOR, ACT domain M001_002395 IPR001341 Aspartate kinase M001_002395 IPR041740 Aspartokinase catalytic domain M001_002400 IPR036107 Carbon storage regulator superfamily M001_002400 IPR003751 Translational regulator CsrA M001_002435 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A M001_002435 IPR012338 Beta-lactamase/transpeptidase-like M001_002435 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal M001_002440 IPR032818 DedA family M001_002440 IPR032816 SNARE associated Golgi protein M001_002445 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_002445 IPR036318 FAD-binding, type PCMH-like superfamily M001_002445 IPR002550 CNNM, transmembrane domain M001_002445 IPR000644 CBS domain M001_002445 IPR005170 Transporter-associated domain M001_002455 IPR020827 Asparaginase/glutaminase, active site 1 M001_002455 IPR040919 Asparaginase/glutaminase, C-terminal M001_002455 IPR027475 Asparaginase/glutaminase, active site 2 M001_002455 IPR037152 L-asparaginase, N-terminal domain superfamily M001_002455 IPR027474 L-asparaginase, N-terminal M001_002455 IPR006034 Asparaginase/glutaminase-like M001_002455 IPR027473 L-asparaginase, C-terminal M001_002455 IPR036152 Asparaginase/glutaminase-like superfamily M001_002455 IPR004550 L-asparaginase, type II M001_002470 IPR000843 LacI-type HTH domain M001_002470 IPR012771 Trehalose operon repressor M001_002470 IPR028082 Periplasmic binding protein-like I M001_002470 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_002475 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M001_002475 IPR001996 Phosphotransferase system, IIB component, type 1 M001_002475 IPR013013 Phosphotransferase system, EIIC component, type 1 M001_002475 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M001_002475 IPR003352 Phosphotransferase system, EIIC M001_002475 IPR011296 Phosphotransferase system, trehalose-specific IIBC component M001_002475 IPR036878 Glucose permease domain IIB M001_002480 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) M001_002480 IPR012769 Trehalose-6-phosphate hydrolase M001_002480 IPR017853 Glycoside hydrolase superfamily M001_002480 IPR013780 Glycosyl hydrolase, all-beta M001_002480 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_002485 IPR011004 Trimeric LpxA-like superfamily M001_002485 IPR001451 Hexapeptide repeat M001_002485 IPR024688 Maltose/galactoside acetyltransferase M001_002485 IPR018357 Hexapeptide transferase, conserved site M001_002495 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M001_002495 IPR006145 Pseudouridine synthase, RsuA/RluA M001_002495 IPR006225 Pseudouridine synthase, RluC/RluD M001_002495 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_002500 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002500 IPR038718 SNF2-like, N-terminal domain superfamily M001_002500 IPR022737 RNA polymerase recycling, bacterial, C-terminal M001_002500 IPR040766 RapA, N-terminal Tudor-like domain 2 M001_002500 IPR023949 RNA polymerase-associated protein RapA M001_002500 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_002500 IPR000330 SNF2-related, N-terminal domain M001_002500 IPR001650 Helicase, C-terminal M001_002500 IPR040765 RapA, N-terminal Tudor like domain 1 M001_002530 IPR036249 Thioredoxin-like superfamily M001_002530 IPR013766 Thioredoxin domain M001_002530 IPR023171 Na/H antiporter domain superfamily M001_002530 IPR004670 Na+/H+ antiporter NhaA M001_002530 IPR012336 Thioredoxin-like fold M001_002545 IPR005814 Aminotransferase class-III M001_002545 IPR015424 Pyridoxal phosphate-dependent transferase M001_002545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_002545 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_002545 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase M001_002550 IPR014743 Chloride channel, core M001_002550 IPR023861 Chloride channel, ClcA M001_002550 IPR001807 Chloride channel, voltage gated M001_002560 IPR035903 HesB-like domain superfamily M001_002560 IPR023063 FeS cluster insertion protein ErpA M001_002560 IPR017870 FeS cluster insertion, C-terminal, conserved site M001_002560 IPR016092 FeS cluster insertion protein M001_002560 IPR000361 FeS cluster biogenesis M001_002565 IPR004770 Na+/H+ antiporter NhaC M001_002565 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal M001_002605 IPR013534 Starch synthase, catalytic domain M001_002605 IPR011835 Bacterial/plant glycogen synthase M001_002605 IPR001296 Glycosyl transferase, family 1 M001_002610 IPR011004 Trimeric LpxA-like superfamily M001_002610 IPR029044 Nucleotide-diphospho-sugar transferases M001_002610 IPR011831 Glucose-1-phosphate adenylyltransferase M001_002610 IPR005835 Nucleotidyl transferase domain M001_002610 IPR005836 ADP-glucose pyrophosphorylase, conserved site M001_002610 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial M001_002615 IPR007848 Methyltransferase small domain M001_002615 IPR013675 Methyltransferase small, N-terminal M001_002615 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_002615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_002615 IPR023543 rRNA small subunit methyltransferase C M001_002620 IPR013785 Aldolase-type TIM barrel M001_002620 IPR002220 DapA-like M001_002620 IPR020625 Schiff base-forming aldolase, active site M001_002620 IPR020624 Schiff base-forming aldolase, conserved site M001_002620 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA M001_002630 IPR038078 PhoU-like domain superfamily M001_002630 IPR002727 Protein of unknown function DUF47 M001_002630 IPR018445 Putative phosphate transport regulator M001_002635 IPR001204 Phosphate transporter M001_002640 IPR001048 Aspartate/glutamate/uridylate kinase M001_002640 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain M001_002640 IPR036393 Acetylglutamate kinase-like superfamily M001_002640 IPR018042 Aspartate kinase, conserved site M001_002640 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I M001_002640 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding M001_002640 IPR001342 Homoserine dehydrogenase, catalytic M001_002640 IPR036291 NAD(P)-binding domain superfamily M001_002640 IPR019811 Homoserine dehydrogenase, conserved site M001_002640 IPR001341 Aspartate kinase M001_002645 IPR011821 O-succinylhomoserine (thiol)-lyase M001_002645 IPR015424 Pyridoxal phosphate-dependent transferase M001_002645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_002645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_002645 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme M001_002650 IPR002084 Methionine repressor MetJ M001_002650 IPR010985 Ribbon-helix-helix M001_002650 IPR023453 Methionine repressor MetJ domain superfamily M001_002655 IPR011051 RmlC-like cupin domain superfamily M001_002655 IPR018062 HTH domain AraC-type, conserved site M001_002655 IPR018060 DNA binding HTH domain, AraC-type M001_002655 IPR023699 Transcription activator HTH, RhaR M001_002655 IPR020449 Transcription regulator HTH, AraC- type M001_002655 IPR009057 Homeobox-like domain superfamily M001_002655 IPR003313 AraC-type arabinose-binding/dimerisation domain M001_002655 IPR014710 RmlC-like jelly roll fold M001_002660 IPR008231 Probable chaperone CsaA M001_002660 IPR012340 Nucleic acid-binding, OB-fold M001_002660 IPR002547 tRNA-binding domain M001_002665 IPR004694 Hydroxy amino acid transporter M001_002665 IPR018227 Amino acid/polyamine transporter 2 M001_002670 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ M001_002670 IPR020550 Inositol monophosphatase, conserved site M001_002670 IPR000760 Inositol monophosphatase-like M001_002670 IPR020583 Inositol monophosphatase, metal-binding site M001_002675 IPR020084 NUDIX hydrolase, conserved site M001_002675 IPR000086 NUDIX hydrolase domain M001_002675 IPR015797 NUDIX hydrolase-like domain superfamily M001_002680 IPR023214 HAD superfamily M001_002680 IPR036412 HAD-like superfamily M001_002680 IPR006439 HAD hydrolase, subfamily IA M001_002680 IPR041492 Haloacid dehalogenase-like hydrolase M001_002695 IPR011004 Trimeric LpxA-like superfamily M001_002695 IPR024688 Maltose/galactoside acetyltransferase M001_002695 IPR018357 Hexapeptide transferase, conserved site M001_002695 IPR001451 Hexapeptide repeat M001_002700 IPR025105 Domain of unknown function DUF4010 M001_002705 IPR004302 Cellulose/chitin-binding protein, N-terminal M001_002705 IPR041029 N-acetylglucosamine binding protein A domain 2 M001_002705 IPR020879 N-acetylglucosamine-binding protein A M001_002705 IPR014756 Immunoglobulin E-set M001_002710 IPR004090 Chemotaxis methyl-accepting receptor M001_002710 IPR003660 HAMP domain M001_002710 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_002710 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M001_002710 IPR000727 Target SNARE coiled-coil homology domain M001_002720 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain M001_002720 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like M001_002720 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB M001_002725 IPR029044 Nucleotide-diphospho-sugar transferases M001_002725 IPR037257 General secretory system II, protein E, N-terminal superfamily M001_002725 IPR007831 General secretory system II, protein E, N-terminal M001_002725 IPR001173 Glycosyltransferase 2-like M001_002730 IPR025137 Bacteriophage N4 adsorption protein A, C-terminal M001_002730 IPR019734 Tetratricopeptide repeat M001_002730 IPR011990 Tetratricopeptide-like helical domain superfamily M001_002730 IPR013026 Tetratricopeptide repeat-containing domain M001_002735 IPR027849 Protein of unknown function DUF4434 M001_002745 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel M001_002745 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB M001_002745 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal M001_002745 IPR002509 NodB homology domain M001_002750 IPR001173 Glycosyltransferase 2-like M001_002750 IPR029044 Nucleotide-diphospho-sugar transferases M001_002750 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA M001_002785 IPR016905 Glycyl radical enzyme, HI0521, predicted M001_002790 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW M001_002790 IPR013785 Aldolase-type TIM barrel M001_002790 IPR001989 Radical-activating enzyme, conserved site M001_002790 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_002790 IPR012839 Organic radical enzyme activase M001_002790 IPR034457 Organic radical-activating enzymes M001_002790 IPR007197 Radical SAM M001_002790 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_002800 IPR000847 Transcription regulator HTH, LysR M001_002800 IPR005119 LysR, substrate-binding M001_002800 IPR037416 Nodulation protein D, PBP2 M001_002800 IPR036388 Winged helix-like DNA-binding domain superfamily M001_002800 IPR036390 Winged helix DNA-binding domain superfamily M001_002805 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_002805 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_002805 IPR015424 Pyridoxal phosphate-dependent transferase M001_002805 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site M001_002805 IPR000796 Aspartate/other aminotransferase M001_002805 IPR004839 Aminotransferase, class I/classII M001_002810 IPR038390 Metal-sensitive transcriptional repressor superfamily M001_002810 IPR003735 Metal-sensitive transcriptional repressor M001_002825 IPR040671 Pullulanase, N2 domain M001_002825 IPR041111 Pullulanase, Ins domain M001_002825 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal M001_002825 IPR013784 Carbohydrate-binding-like fold M001_002825 IPR011839 Alpha-1,6-glucosidases, pullulanase-type M001_002825 IPR014756 Immunoglobulin E-set M001_002825 IPR005323 Pullulanase, carbohydrate-binding module 41 M001_002825 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_002825 IPR004193 Glycoside hydrolase, family 13, N-terminal M001_002825 IPR013780 Glycosyl hydrolase, all-beta M001_002825 IPR013783 Immunoglobulin-like fold M001_002825 IPR017853 Glycoside hydrolase superfamily M001_002830 IPR001757 P-type ATPase M001_002830 IPR027256 P-type ATPase, subfamily IB M001_002830 IPR006121 Heavy metal-associated domain, HMA M001_002830 IPR017969 Heavy-metal-associated, conserved site M001_002830 IPR036163 Heavy metal-associated domain superfamily M001_002830 IPR036412 HAD-like superfamily M001_002830 IPR023214 HAD superfamily M001_002830 IPR008250 P-type ATPase, A domain superfamily M001_002830 IPR023298 P-type ATPase, transmembrane domain superfamily M001_002830 IPR018303 P-type ATPase, phosphorylation site M001_002830 IPR023299 P-type ATPase, cytoplasmic domain N M001_002835 IPR018219 Thiol peroxidase conserved site M001_002835 IPR013766 Thioredoxin domain M001_002835 IPR036249 Thioredoxin-like superfamily M001_002835 IPR002065 Thiol peroxidase Tpx M001_002835 IPR013740 Redoxin M001_002845 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_002845 IPR014014 RNA helicase, DEAD-box type, Q motif M001_002845 IPR011545 DEAD/DEAH box helicase domain M001_002845 IPR028622 ATP-dependent RNA helicase RhlE M001_002845 IPR001650 Helicase, C-terminal M001_002845 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002845 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_002855 IPR017766 Sphingomyelinase C/phospholipase C M001_002855 IPR005135 Endonuclease/exonuclease/phosphatase M001_002855 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M001_002875 IPR008249 Uncharacterised protein family UPF0231 M001_002880 IPR041522 CdaR, GGDEF-like domain M001_002880 IPR025736 PucR C-terminal helix-turn-helix domain M001_002880 IPR042070 PucR C-terminal helix-turn-helix domain superfamily M001_002880 IPR008599 Putative sugar diacid recognition M001_002885 IPR003474 Gluconate transporter M001_002890 IPR018193 Glycerate kinase, flavodoxin-like fold M001_002890 IPR004381 Glycerate kinase M001_002890 IPR018197 Glycerate kinase, restriction-enzyme-like fold M001_002890 IPR036129 Glycerate kinase superfamily M001_002900 IPR036249 Thioredoxin-like superfamily M001_002900 IPR029759 Glutathione peroxidase active site M001_002900 IPR000889 Glutathione peroxidase M001_002905 IPR036388 Winged helix-like DNA-binding domain superfamily M001_002905 IPR036390 Winged helix DNA-binding domain superfamily M001_002905 IPR005119 LysR, substrate-binding M001_002905 IPR000847 Transcription regulator HTH, LysR M001_002910 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M001_002910 IPR011657 Concentrative nucleoside transporter C-terminal domain M001_002910 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial M001_002910 IPR008276 Concentrative nucleoside transporter M001_002910 IPR002668 Concentrative nucleoside transporter N-terminal domain M001_002920 IPR036591 YggU-like superfamily M001_002920 IPR005228 Conserved hypothetical protein CHP00251 M001_002920 IPR003746 Protein of unknown function DUF167 M001_002925 IPR003425 CCB3/YggT M001_002930 IPR036291 NAD(P)-binding domain superfamily M001_002930 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal M001_002930 IPR000304 Pyrroline-5-carboxylate reductase M001_002930 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain M001_002930 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_002935 IPR011078 Pyridoxal phosphate homeostasis protein M001_002935 IPR001608 Alanine racemase, N-terminal M001_002935 IPR029066 PLP-binding barrel M001_002940 IPR003593 AAA+ ATPase domain M001_002940 IPR006321 Pilus retraction protein PilT M001_002940 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002940 IPR001482 Type II/IV secretion system protein M001_002945 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002945 IPR001482 Type II/IV secretion system protein M001_002945 IPR003593 AAA+ ATPase domain M001_002945 IPR006321 Pilus retraction protein PilT M001_002950 IPR005583 Peroxide stress protein YaaA M001_002960 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain M001_002960 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain M001_002960 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site M001_002960 IPR023546 Methylated-DNA--protein-cysteine methyltransferase M001_002960 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily M001_002960 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding M001_002960 IPR036388 Winged helix-like DNA-binding domain superfamily M001_002965 IPR000352 Peptide chain release factor class I M001_002970 IPR002187 Nitrogen regulatory protein PII M001_002970 IPR011322 Nitrogen regulatory PII-like, alpha/beta M001_002970 IPR002332 Nitrogen regulatory protein P-II, urydylation site M001_002970 IPR017918 Nitrogen regulatory protein PII, conserved site M001_002970 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M001_002975 IPR006059 Bacterial extracellular solute-binding protein M001_002975 IPR026045 Ferric binding protein M001_002985 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit M001_002985 IPR003439 ABC transporter-like M001_002985 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_002985 IPR013611 Transport-associated OB, type 2 M001_002985 IPR017871 ABC transporter, conserved site M001_002985 IPR008995 Molybdate/tungstate binding, C-terminal M001_002985 IPR003593 AAA+ ATPase domain M001_002985 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA M001_002990 IPR006314 Dyp-type peroxidase M001_002990 IPR011008 Dimeric alpha-beta barrel M001_002995 IPR001669 Arginine repressor M001_002995 IPR020899 Arginine repressor, C-terminal M001_002995 IPR036251 Arginine repressor, C-terminal domain superfamily M001_002995 IPR036390 Winged helix DNA-binding domain superfamily M001_002995 IPR036388 Winged helix-like DNA-binding domain superfamily M001_002995 IPR020900 Arginine repressor, DNA-binding domain M001_003000 IPR003593 AAA+ ATPase domain M001_003000 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M001_003000 IPR017871 ABC transporter, conserved site M001_003000 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003000 IPR003439 ABC transporter-like M001_003005 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M001_003005 IPR018313 Solute-binding protein family 3, conserved site M001_003005 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_003005 IPR001320 Ionotropic glutamate receptor M001_003010 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M001_003010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_003010 IPR035906 MetI-like superfamily M001_003015 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_003015 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M001_003015 IPR035906 MetI-like superfamily M001_003020 IPR001557 L-lactate/malate dehydrogenase M001_003020 IPR022383 Lactate/malate dehydrogenase, C-terminal M001_003020 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal M001_003020 IPR001252 Malate dehydrogenase, active site M001_003020 IPR010097 Malate dehydrogenase, type 1 M001_003020 IPR023958 Malate dehydrogenase, type 1, bacterial M001_003020 IPR036291 NAD(P)-binding domain superfamily M001_003020 IPR001236 Lactate/malate dehydrogenase, N-terminal M001_003025 IPR011990 Tetratricopeptide-like helical domain superfamily M001_003025 IPR006597 Sel1-like repeat M001_003030 IPR023950 Flavohemoprotein M001_003030 IPR012292 Globin/Protoglobin M001_003030 IPR009050 Globin-like superfamily M001_003030 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M001_003030 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase M001_003030 IPR000971 Globin M001_003030 IPR017938 Riboflavin synthase-like beta-barrel M001_003030 IPR017927 FAD-binding domain, ferredoxin reductase-type M001_003030 IPR001433 Oxidoreductase FAD/NAD(P)-binding M001_003030 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M001_003035 IPR030489 Transcription regulator Rrf2-type, conserved site M001_003035 IPR036390 Winged helix DNA-binding domain superfamily M001_003035 IPR036388 Winged helix-like DNA-binding domain superfamily M001_003035 IPR023761 Transcriptional repressor HTH, NsrR M001_003035 IPR000944 Transcription regulator Rrf2-type M001_003040 IPR000644 CBS domain M001_003040 IPR002550 CNNM, transmembrane domain M001_003040 IPR005170 Transporter-associated domain M001_003040 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_003040 IPR036318 FAD-binding, type PCMH-like superfamily M001_003045 IPR002541 Cytochrome c assembly protein M001_003050 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003050 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M001_003050 IPR022941 Signal recognition particle, SRP54 subunit M001_003050 IPR003593 AAA+ ATPase domain M001_003050 IPR004780 Signal recognition particle protein M001_003050 IPR004125 Signal recognition particle, SRP54 subunit, M-domain M001_003050 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily M001_003050 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily M001_003050 IPR013822 Signal recognition particle SRP54, helical bundle M001_003055 IPR000307 Ribosomal protein S16 M001_003055 IPR023803 Ribosomal protein S16 domain superfamily M001_003060 IPR002676 RimM, N-terminal M001_003060 IPR027275 PRC-barrel domain M001_003060 IPR011961 16S rRNA processing protein RimM M001_003060 IPR036976 RimM, N-terminal domain superfamily M001_003060 IPR011033 PRC-barrel-like superfamily M001_003060 IPR009000 Translation protein, beta-barrel domain superfamily M001_003065 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria M001_003065 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain M001_003065 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M001_003065 IPR029028 Alpha/beta knot methyltransferases M001_003065 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal M001_003070 IPR008991 Translation protein SH3-like domain superfamily M001_003070 IPR038657 Ribosomal protein L19 superfamily M001_003070 IPR001857 Ribosomal protein L19 M001_003070 IPR018257 Ribosomal protein L19, conserved site M001_003080 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily M001_003080 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II M001_003080 IPR011335 Restriction endonuclease type II-like M001_003080 IPR004230 DNA mismatch repair protein MutH M001_003085 IPR000086 NUDIX hydrolase domain M001_003085 IPR020476 NUDIX hydrolase M001_003085 IPR015797 NUDIX hydrolase-like domain superfamily M001_003085 IPR020084 NUDIX hydrolase, conserved site M001_003085 IPR022927 RNA pyrophosphohydrolase RppH M001_003090 IPR018274 PEP-utilising enzyme, active site M001_003090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_003090 IPR040442 Pyruvate kinase-like domain superfamily M001_003090 IPR036618 PtsI, HPr-binding domain superfamily M001_003090 IPR000121 PEP-utilising enzyme, C-terminal M001_003090 IPR008279 PEP-utilising enzyme, mobile domain M001_003090 IPR029016 GAF-like domain superfamily M001_003090 IPR008731 Phosphotransferase system, enzyme I N-terminal M001_003090 IPR023151 PEP-utilising enzyme, conserved site M001_003090 IPR036637 Phosphohistidine domain superfamily M001_003090 IPR006318 Phosphotransferase system, enzyme I-like M001_003090 IPR003018 GAF domain M001_003095 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt M001_003100 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily M001_003100 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain M001_003100 IPR020940 Thymidylate synthase, active site M001_003100 IPR000398 Thymidylate synthase M001_003105 IPR004670 Na+/H+ antiporter NhaA M001_003105 IPR023171 Na/H antiporter domain superfamily M001_003115 IPR005119 LysR, substrate-binding M001_003115 IPR000847 Transcription regulator HTH, LysR M001_003115 IPR036388 Winged helix-like DNA-binding domain superfamily M001_003115 IPR036390 Winged helix DNA-binding domain superfamily M001_003120 IPR036390 Winged helix DNA-binding domain superfamily M001_003120 IPR001845 HTH ArsR-type DNA-binding domain M001_003120 IPR036388 Winged helix-like DNA-binding domain superfamily M001_003120 IPR011991 ArsR-like helix-turn-helix domain M001_003125 IPR002583 Ribosomal protein S20 M001_003125 IPR036510 Ribosomal protein S20 superfamily M001_003130 IPR004268 Peptidoglycan biosynthesis protein MurJ M001_003135 IPR015864 FAD synthetase M001_003135 IPR023468 Riboflavin kinase M001_003135 IPR002606 Riboflavin kinase, bacterial M001_003135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_003135 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic M001_003135 IPR023465 Riboflavin kinase domain superfamily M001_003140 IPR002301 Isoleucine-tRNA ligase M001_003140 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain M001_003140 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_003140 IPR010663 Zinc finger, FPG/IleRS-type M001_003140 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M001_003140 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M001_003140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_003140 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M001_003140 IPR023585 Isoleucine-tRNA ligase, type 1 M001_003140 IPR002300 Aminoacyl-tRNA synthetase, class Ia M001_003145 IPR001872 Peptidase A8, signal peptidase II M001_003150 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M001_003155 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase M001_003160 IPR012902 Prokaryotic N-terminal methylation site M001_003160 IPR001082 Fimbrial protein pilin M001_003180 IPR008707 PilC beta-propeller domain M001_003180 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily M001_003195 IPR036526 Carbon-nitrogen hydrolase superfamily M001_003195 IPR022310 NAD/GMP synthase M001_003195 IPR000132 Nitrilase/cyanide hydratase, conserved site M001_003195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_003195 IPR003694 NAD(+) synthetase M001_003195 IPR003010 Carbon-nitrogen hydrolase M001_003195 IPR014445 Glutamine-dependent NAD(+) synthetase M001_003200 IPR017918 Nitrogen regulatory protein PII, conserved site M001_003200 IPR011322 Nitrogen regulatory PII-like, alpha/beta M001_003200 IPR002187 Nitrogen regulatory protein PII M001_003200 IPR002332 Nitrogen regulatory protein P-II, urydylation site M001_003200 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M001_003210 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily M001_003210 IPR003815 S-ribosylhomocysteinase (LuxS) M001_003210 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M001_003220 IPR012902 Prokaryotic N-terminal methylation site M001_003220 IPR001082 Fimbrial protein pilin M001_003225 IPR001130 TatD family M001_003225 IPR032466 Metal-dependent hydrolase M001_003225 IPR018228 Deoxyribonuclease, TatD-related, conserved site M001_003230 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial M001_003230 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M001_003230 IPR011657 Concentrative nucleoside transporter C-terminal domain M001_003230 IPR008276 Concentrative nucleoside transporter M001_003230 IPR002668 Concentrative nucleoside transporter N-terminal domain M001_003240 IPR002915 DeoC/FbaB/ lacD aldolase M001_003240 IPR013785 Aldolase-type TIM barrel M001_003240 IPR011343 Deoxyribose-phosphate aldolase M001_003240 IPR023649 Deoxyribose-phosphate aldolase type II M001_003245 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal M001_003245 IPR000312 Glycosyl transferase, family 3 M001_003245 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily M001_003245 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic M001_003245 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily M001_003245 IPR017459 Glycosyl transferase family 3, N-terminal domain M001_003245 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily M001_003245 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase M001_003245 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site M001_003245 IPR013465 Thymidine phosphorylase M001_003250 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_003250 IPR010045 Phosphopentomutase M001_003250 IPR006124 Metalloenzyme M001_003250 IPR024052 Phosphopentomutase DeoB cap domain superfamily M001_003255 IPR035994 Nucleoside phosphorylase superfamily M001_003255 IPR018016 Nucleoside phosphorylase, conserved site M001_003255 IPR004402 Purine nucleoside phosphorylase DeoD-type M001_003255 IPR000845 Nucleoside phosphorylase domain M001_003265 IPR036412 HAD-like superfamily M001_003265 IPR023190 Phosphoserine phosphatase, domain 2 M001_003265 IPR041449 Phosphoserine phosphatase, N-terminal M001_003265 IPR023214 HAD superfamily M001_003275 IPR024473 Transposase, IS4, N-terminal M001_003275 IPR012337 Ribonuclease H-like superfamily M001_003275 IPR002559 Transposase, IS4-like M001_003285 IPR020568 Ribosomal protein S5 domain 2-type fold M001_003285 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_003285 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain M001_003285 IPR003593 AAA+ ATPase domain M001_003285 IPR041166 LapB, rubredoxin metal binding domain M001_003285 IPR004504 DNA repair protein RadA M001_003285 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003290 IPR027021 Cyclic di-GMP binding protein, PA4608 type M001_003290 IPR009875 PilZ domain M001_003295 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M001_003295 IPR038309 Rsd/AlgQ superfamily M001_003300 IPR020816 Histone-like DNA-binding protein, conserved site M001_003300 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M001_003300 IPR000119 Histone-like DNA-binding protein M001_003310 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily M001_003310 IPR003156 DHHA1 domain M001_003310 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria M001_003310 IPR012947 Threonyl/alanyl tRNA synthetase, SAD M001_003310 IPR002318 Alanine-tRNA ligase, class IIc M001_003310 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily M001_003310 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain M001_003310 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal M001_003310 IPR009000 Translation protein, beta-barrel domain superfamily M001_003315 IPR001046 NRAMP family M001_003320 IPR000529 Ribosomal protein S6 M001_003320 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 M001_003320 IPR020814 Ribosomal protein S6, plastid/chloroplast M001_003320 IPR035980 Ribosomal protein S6 superfamily M001_003325 IPR018275 Ribosomal protein S18, conserved site M001_003325 IPR001648 Ribosomal protein S18 M001_003325 IPR036870 Ribosomal protein S18 superfamily M001_003330 IPR000244 Ribosomal protein L9 M001_003330 IPR009027 Ribosomal protein L9/RNase H1, N-terminal M001_003330 IPR020594 Ribosomal protein L9, bacteria/chloroplast M001_003330 IPR020069 Ribosomal protein L9, C-terminal M001_003330 IPR020070 Ribosomal protein L9, N-terminal M001_003330 IPR036935 Ribosomal protein L9, N-terminal domain superfamily M001_003330 IPR036791 Ribosomal protein L9, C-terminal domain superfamily M001_003335 IPR033892 Ferredoxin--NADP reductase, bacteria M001_003335 IPR017927 FAD-binding domain, ferredoxin reductase-type M001_003335 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M001_003335 IPR001433 Oxidoreductase FAD/NAD(P)-binding M001_003335 IPR017938 Riboflavin synthase-like beta-barrel M001_003335 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M001_003360 IPR042104 Polyketide synthase, dehydratase domain superfamily M001_003360 IPR011032 GroES-like superfamily M001_003360 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M001_003360 IPR036291 NAD(P)-binding domain superfamily M001_003360 IPR020807 Polyketide synthase, dehydratase domain M001_003360 IPR020843 Polyketide synthase, enoylreductase domain M001_003360 IPR020806 Polyketide synthase, phosphopantetheine-binding domain M001_003360 IPR014043 Acyl transferase M001_003360 IPR009081 Phosphopantetheine binding ACP domain M001_003360 IPR006162 Phosphopantetheine attachment site M001_003360 IPR036736 ACP-like superfamily M001_003360 IPR013154 Alcohol dehydrogenase, N-terminal M001_003360 IPR001227 Acyl transferase domain superfamily M001_003360 IPR013968 Polyketide synthase, ketoreductase domain M001_003360 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M001_003365 IPR032816 SNARE associated Golgi protein M001_003370 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M001_003370 IPR011765 Peptidase M16, N-terminal M001_003370 IPR001431 Peptidase M16, zinc-binding site M001_003370 IPR007863 Peptidase M16, C-terminal M001_003375 IPR006334 Glutamate--cysteine ligase, monofunctional M001_003375 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain M001_003375 IPR007370 Glutamate--cysteine ligase M001_003380 IPR020845 AMP-binding, conserved site M001_003380 IPR000873 AMP-dependent synthetase/ligase M001_003380 IPR042099 AMP-dependent synthetase-like superfamily M001_003390 IPR016181 Acyl-CoA N-acyltransferase M001_003390 IPR000182 GNAT domain M001_003390 IPR017813 Mycothiol acetyltransferase M001_003400 IPR003593 AAA+ ATPase domain M001_003400 IPR023671 ATPase RavA M001_003400 IPR022547 ATPase, RavA, C-terminal M001_003400 IPR011704 ATPase, dynein-related, AAA domain M001_003400 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003400 IPR041538 ATPase RavA-like, AAA lid domain M001_003405 IPR008912 Uncharacterised protein family CoxE-like M001_003405 IPR023481 Uncharacterised protein family ViaA M001_003405 IPR002035 von Willebrand factor, type A M001_003405 IPR036465 von Willebrand factor A-like domain superfamily M001_003410 IPR000160 GGDEF domain M001_003410 IPR011006 CheY-like superfamily M001_003410 IPR029787 Nucleotide cyclase M001_003410 IPR001789 Signal transduction response regulator, receiver domain M001_003415 IPR036291 NAD(P)-binding domain superfamily M001_003415 IPR002347 Short-chain dehydrogenase/reductase SDR M001_003420 IPR031157 Tr-type G domain, conserved site M001_003420 IPR035647 EF-G domain III/V-like M001_003420 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily M001_003420 IPR032090 Peptide chain release factor 3, C-terminal M001_003420 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003420 IPR009000 Translation protein, beta-barrel domain superfamily M001_003420 IPR000795 Transcription factor, GTP-binding domain M001_003420 IPR004548 Peptide chain release factor 3 M001_003420 IPR004161 Translation elongation factor EFTu-like, domain 2 M001_003420 IPR041732 Peptide chain release factor 3, GTP-binding domain M001_003420 IPR005225 Small GTP-binding protein domain M001_003425 IPR016181 Acyl-CoA N-acyltransferase M001_003425 IPR000182 GNAT domain M001_003430 IPR016181 Acyl-CoA N-acyltransferase M001_003430 IPR000182 GNAT domain M001_003435 IPR020846 Major facilitator superfamily domain M001_003435 IPR022855 Multidrug resistance protein MdtH M001_003435 IPR036259 MFS transporter superfamily M001_003435 IPR011701 Major facilitator superfamily M001_003440 IPR005119 LysR, substrate-binding M001_003440 IPR036388 Winged helix-like DNA-binding domain superfamily M001_003440 IPR000847 Transcription regulator HTH, LysR M001_003440 IPR036390 Winged helix DNA-binding domain superfamily M001_003445 IPR011096 FTP domain M001_003445 IPR001570 Peptidase M4, C-terminal M001_003445 IPR025711 PepSY domain M001_003445 IPR013856 Peptidase M4 domain M001_003445 IPR007280 Peptidase, C-terminal, archaeal/bacterial M001_003445 IPR023612 Peptidase M4 M001_003445 IPR027268 Peptidase M4/M1, CTD superfamily M001_003450 IPR000182 GNAT domain M001_003450 IPR016181 Acyl-CoA N-acyltransferase M001_003455 IPR000182 GNAT domain M001_003455 IPR016181 Acyl-CoA N-acyltransferase M001_003465 IPR004104 Oxidoreductase, C-terminal M001_003465 IPR036291 NAD(P)-binding domain superfamily M001_003465 IPR000683 Oxidoreductase, N-terminal M001_003470 IPR011701 Major facilitator superfamily M001_003470 IPR020846 Major facilitator superfamily domain M001_003470 IPR036259 MFS transporter superfamily M001_003470 IPR023697 Multidrug resistance protein MdtL M001_003475 IPR002637 Ham1-like protein M001_003475 IPR020922 dITP/XTP pyrophosphatase M001_003475 IPR029001 Inosine triphosphate pyrophosphatase-like M001_003480 IPR034505 Anaerobic coproporphyrinogen-III oxidase M001_003480 IPR010723 HemN, C-terminal M001_003480 IPR004559 Heme chaperone HemW-like M001_003480 IPR023404 Radical SAM, alpha/beta horseshoe M001_003480 IPR007197 Radical SAM M001_003480 IPR006638 Elp3/MiaB/NifB M001_003485 IPR005589 Alternative ribosome-rescue factor A M001_003490 IPR011794 Hg(II)-responsive transcriptional regulator M001_003490 IPR009061 Putative DNA-binding domain superfamily M001_003490 IPR000551 MerR-type HTH domain M001_003495 IPR024051 AICAR transformylase, duplicated domain superfamily M001_003495 IPR011607 Methylglyoxal synthase-like domain M001_003495 IPR002695 Bifunctional purine biosynthesis protein PurH-like M001_003495 IPR016193 Cytidine deaminase-like M001_003495 IPR036914 Methylglyoxal synthase-like domain superfamily M001_003500 IPR020560 Phosphoribosylglycinamide synthetase, C-domain M001_003500 IPR011054 Rudiment single hybrid motif M001_003500 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal M001_003500 IPR020559 Phosphoribosylglycinamide synthetase, conserved site M001_003500 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily M001_003500 IPR000115 Phosphoribosylglycinamide synthetase M001_003500 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M001_003500 IPR016185 Pre-ATP-grasp domain superfamily M001_003500 IPR013815 ATP-grasp fold, subdomain 1 M001_003500 IPR011761 ATP-grasp fold M001_003520 IPR007627 RNA polymerase sigma-70 region 2 M001_003520 IPR028630 RNA polymerase sigma factor RpoD M001_003520 IPR012760 RNA polymerase sigma factor RpoD, C-terminal M001_003520 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_003520 IPR013325 RNA polymerase sigma factor, region 2 M001_003520 IPR042189 Sigma-70 factor, region 1.1 superfamily M001_003520 IPR014284 RNA polymerase sigma-70 like domain M001_003520 IPR007127 RNA polymerase sigma factor 70, region 1.1 M001_003520 IPR007631 RNA polymerase sigma factor 70, non-essential domain M001_003520 IPR007630 RNA polymerase sigma-70 region 4 M001_003520 IPR007624 RNA polymerase sigma-70 region 3 M001_003520 IPR009042 RNA polymerase sigma-70 region 1.2 M001_003520 IPR036388 Winged helix-like DNA-binding domain superfamily M001_003520 IPR000943 RNA polymerase sigma-70 M001_003525 IPR013173 DNA primase DnaG, DnaB-binding domain M001_003525 IPR006295 DNA primase, DnaG M001_003525 IPR019475 DNA primase, DnaB-helicase binding domain M001_003525 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily M001_003525 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M001_003525 IPR036977 DNA Primase, CHC2-type zinc finger M001_003525 IPR013264 DNA primase, catalytic core, N-terminal M001_003525 IPR002694 Zinc finger, CHC2-type M001_003525 IPR006171 TOPRIM domain M001_003525 IPR034151 Bacterial DnaG primase, TOPRIM domain M001_003525 IPR030846 DNA primase DnaG, bacteria M001_003530 IPR042184 YqeY/Aim41, N-terminal domain M001_003530 IPR019004 Uncharacterised protein YqeY/Aim41 M001_003530 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 M001_003530 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like M001_003535 IPR038380 Ribosomal protein S21 superfamily M001_003535 IPR018278 Ribosomal protein S21, conserved site M001_003535 IPR001911 Ribosomal protein S21 M001_003540 IPR017860 Peptidase M22, conserved site M001_003540 IPR017861 Kae1/TsaD family M001_003540 IPR000905 Gcp-like domain M001_003540 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD M001_003545 IPR004668 Anaerobic c4-dicarboxylate membrane transporter M001_003550 IPR004708 Aspartate ammonia-lyase M001_003550 IPR008948 L-Aspartase-like M001_003550 IPR022761 Fumarate lyase, N-terminal M001_003550 IPR000362 Fumarate lyase family M001_003550 IPR024083 Fumarase/histidase, N-terminal M001_003550 IPR020557 Fumarate lyase, conserved site M001_003550 IPR018951 Fumarase C, C-terminal M001_003555 IPR007313 FxsA cytoplasmic membrane protein M001_003560 IPR002528 Multi antimicrobial extrusion protein M001_003565 IPR037124 GroES chaperonin superfamily M001_003565 IPR018369 Chaperonin GroES, conserved site M001_003565 IPR020818 GroES chaperonin family M001_003565 IPR011032 GroES-like superfamily M001_003570 IPR027413 GroEL-like equatorial domain superfamily M001_003570 IPR027410 TCP-1-like chaperonin intermediate domain superfamily M001_003570 IPR001844 Chaperonin Cpn60 M001_003570 IPR027409 GroEL-like apical domain superfamily M001_003570 IPR002423 Chaperonin Cpn60/TCP-1 family M001_003570 IPR018370 Chaperonin Cpn60, conserved site M001_003580 IPR005330 MHYT domain M001_003580 IPR001633 EAL domain M001_003580 IPR029787 Nucleotide cyclase M001_003580 IPR035919 EAL domain superfamily M001_003580 IPR000160 GGDEF domain M001_003610 IPR000788 Ribonucleotide reductase large subunit, C-terminal M001_003610 IPR013509 Ribonucleotide reductase large subunit, N-terminal M001_003610 IPR013346 Ribonucleotide reductase, class I , alpha subunit M001_003610 IPR013554 Ribonucleotide reductase N-terminal M001_003610 IPR039718 Ribonucleoside-diphosphate reductase large subunit M001_003610 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal M001_003610 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE M001_003620 IPR003714 PhoH-like protein M001_003620 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003620 IPR029060 PIN-like domain superfamily M001_003620 IPR002716 PIN domain M001_003625 IPR003439 ABC transporter-like M001_003625 IPR003593 AAA+ ATPase domain M001_003625 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003625 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ M001_003625 IPR017871 ABC transporter, conserved site M001_003630 IPR005947 Thiamine ABC transporter, permease protein M001_003630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_003630 IPR035906 MetI-like superfamily M001_003635 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria M001_003635 IPR006061 Solute-binding family 1, conserved site M001_003635 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter M001_003650 IPR004431 3-isopropylmalate dehydratase, small subunit M001_003650 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel M001_003650 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain M001_003650 IPR033940 3-isopropylmalate dehydratase, swivel domain M001_003655 IPR004430 3-isopropylmalate dehydratase, large subunit M001_003655 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain M001_003655 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 M001_003655 IPR018136 Aconitase family, 4Fe-4S cluster binding site M001_003655 IPR036008 Aconitase, iron-sulfur domain M001_003655 IPR033941 3-Isopropylmalate dehydratase, catalytic domain M001_003660 IPR004429 Isopropylmalate dehydrogenase M001_003660 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site M001_003660 IPR024084 Isopropylmalate dehydrogenase-like domain M001_003665 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site M001_003665 IPR013785 Aldolase-type TIM barrel M001_003665 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain M001_003665 IPR005671 2-isopropylmalate synthase, bacterial-type M001_003665 IPR000891 Pyruvate carboxyltransferase M001_003665 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily M001_003675 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M001_003675 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M001_003690 IPR039368 Acetolactate synthase large subunit, TPP binding domain M001_003690 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M001_003690 IPR000399 TPP-binding enzyme, conserved site M001_003690 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M001_003690 IPR012846 Acetolactate synthase, large subunit, biosynthetic M001_003690 IPR029035 DHS-like NAD/FAD-binding domain superfamily M001_003690 IPR029061 Thiamin diphosphate-binding fold M001_003690 IPR012000 Thiamine pyrophosphate enzyme, central domain M001_003695 IPR039557 AHAS, ACT domain M001_003695 IPR002912 ACT domain M001_003695 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal M001_003695 IPR019455 Acetolactate synthase, small subunit, C-terminal M001_003695 IPR004789 Acetolactate synthase, small subunit M001_003720 IPR009057 Homeobox-like domain superfamily M001_003720 IPR002197 DNA binding HTH domain, Fis-type M001_003720 IPR005412 DNA-binding protein Fis M001_003725 IPR035587 DUS-like, FMN-binding domain M001_003725 IPR032887 tRNA-dihydrouridine synthase B M001_003725 IPR013785 Aldolase-type TIM barrel M001_003725 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal M001_003725 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 M001_003725 IPR001269 tRNA-dihydrouridine synthase M001_003725 IPR018517 tRNA-dihydrouridine synthase, conserved site M001_003730 IPR010130 Type I secretion outer membrane protein, TolC M001_003730 IPR003423 Outer membrane efflux protein M001_003735 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_003765 IPR011006 CheY-like superfamily M001_003765 IPR036457 PPM-type phosphatase domain superfamily M001_003765 IPR028616 Regulator of RpoS M001_003765 IPR001789 Signal transduction response regulator, receiver domain M001_003765 IPR039420 Transcriptional regulatory protein WalR-like M001_003770 IPR005279 Dipeptide/tripeptide permease M001_003770 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site M001_003770 IPR000109 Proton-dependent oligopeptide transporter family M001_003770 IPR036259 MFS transporter superfamily M001_003770 IPR020846 Major facilitator superfamily domain M001_003775 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type M001_003775 IPR029044 Nucleotide-diphospho-sugar transferases M001_003775 IPR005835 Nucleotidyl transferase domain M001_003780 IPR010994 RuvA domain 2-like M001_003780 IPR004509 Competence protein ComEA, helix-hairpin-helix domain M001_003785 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003785 IPR016475 Phosphate acetyltransferase, bacteria M001_003785 IPR010766 DRTGG M001_003785 IPR042113 Phosphate acetyltransferase, domain 1 M001_003785 IPR042112 Phosphate acetyltransferase, domain 2 M001_003785 IPR002505 Phosphate acetyl/butaryl transferase M001_003785 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily M001_003785 IPR004614 Phosphate acetyltransferase M001_003790 IPR023865 Aliphatic acid kinase, short-chain, conserved site M001_003790 IPR000890 Aliphatic acid kinase, short-chain M001_003790 IPR004372 Acetate/propionate kinase M001_003795 IPR007334 Uncharacterised protein family UPF0208 M001_003800 IPR005587 Uncharacterised protein family UPF0304, YfbU M001_003800 IPR023146 YfbU, alpha-helical bundle domain superfamily M001_003800 IPR023145 YfbU, helix-hairpin domain superfamily M001_003805 IPR024706 Peroxiredoxin, AhpC-type M001_003805 IPR013766 Thioredoxin domain M001_003805 IPR036249 Thioredoxin-like superfamily M001_003805 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M001_003810 IPR016867 Glycine cleavage system transcriptional repressor M001_003810 IPR002912 ACT domain M001_003815 IPR013785 Aldolase-type TIM barrel M001_003815 IPR020625 Schiff base-forming aldolase, active site M001_003815 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA M001_003815 IPR002220 DapA-like M001_003820 IPR014524 Outer membrane protein assembly factor BamC M001_003820 IPR042268 Outer membrane protein assembly factor BamC, C-terminal M001_003820 IPR010653 NlpB/DapX lipoprotein M001_003825 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type M001_003825 IPR028923 SAICAR synthetase/ADE2, N-terminal M001_003835 IPR036390 Winged helix DNA-binding domain superfamily M001_003835 IPR036388 Winged helix-like DNA-binding domain superfamily M001_003835 IPR000847 Transcription regulator HTH, LysR M001_003835 IPR005119 LysR, substrate-binding M001_003840 IPR018635 Uncharacterised protein family UPF0319 M001_003860 IPR040642 Histidine kinase receptor ArcB, transmembrane domain M001_003860 IPR000014 PAS domain M001_003860 IPR000700 PAS-associated, C-terminal M001_003860 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_003860 IPR013767 PAS fold M001_003860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_003860 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB M001_003860 IPR035965 PAS domain superfamily M001_003860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_003860 IPR001789 Signal transduction response regulator, receiver domain M001_003860 IPR005467 Histidine kinase domain M001_003860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_003860 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily M001_003860 IPR011006 CheY-like superfamily M001_003860 IPR036641 HPT domain superfamily M001_003860 IPR003594 Histidine kinase/HSP90-like ATPase M001_003860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_003865 IPR026875 Phosphohydrolase-associated domain M001_003865 IPR006674 HD domain M001_003865 IPR003607 HD/PDEase domain M001_003865 IPR020779 dNTP triphosphohydrolase, type 1 M001_003865 IPR006261 dNTP triphosphohydrolase M001_003865 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily M001_003875 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_003875 IPR003660 HAMP domain M001_003880 IPR006645 NusG, N-terminal M001_003880 IPR036735 NusG, N-terminal domain superfamily M001_003880 IPR010215 Transcription antitermination protein RfaH M001_003885 IPR004872 Lipoprotein NlpA family M001_003890 IPR035906 MetI-like superfamily M001_003890 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_003895 IPR026253 Methionine import ATP-binding protein MetN M001_003895 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria M001_003895 IPR003439 ABC transporter-like M001_003895 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003895 IPR018449 NIL domain M001_003895 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain M001_003895 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal M001_003895 IPR003593 AAA+ ATPase domain M001_003895 IPR017871 ABC transporter, conserved site M001_003905 IPR000600 ROK family M001_003910 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_003910 IPR013542 Domain of unknown function DUF1730 M001_003910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_003910 IPR004453 Epoxyqueuosine reductase QueG M001_003915 IPR004443 YjeF N-terminal domain M001_003915 IPR017953 Carbohydrate kinase, predicted, conserved site M001_003915 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase M001_003915 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr M001_003915 IPR036652 YjeF N-terminal domain superfamily M001_003915 IPR029056 Ribokinase-like M001_003920 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003920 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE M001_003925 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain M001_003930 IPR020568 Ribosomal protein S5 domain 2-type fold M001_003930 IPR042121 MutL, C-terminal domain, regulatory subdomain M001_003930 IPR042120 MutL, C-terminal domain, dimerisation subdomain M001_003930 IPR037198 MutL, C-terminal domain superfamily M001_003930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_003930 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_003930 IPR013507 DNA mismatch repair protein, S5 domain 2-like M001_003930 IPR002099 DNA mismatch repair protein family, N-terminal M001_003930 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms M001_003930 IPR014790 MutL, C-terminal, dimerisation M001_003930 IPR014762 DNA mismatch repair, conserved site M001_003930 IPR020667 DNA mismatch repair protein, MutL M001_003935 IPR042121 MutL, C-terminal domain, regulatory subdomain M001_003935 IPR020667 DNA mismatch repair protein, MutL M001_003935 IPR002099 DNA mismatch repair protein family, N-terminal M001_003935 IPR042120 MutL, C-terminal domain, dimerisation subdomain M001_003935 IPR037198 MutL, C-terminal domain superfamily M001_003935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_003935 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms M001_003935 IPR014790 MutL, C-terminal, dimerisation M001_003935 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_003935 IPR020568 Ribosomal protein S5 domain 2-type fold M001_003935 IPR013507 DNA mismatch repair protein, S5 domain 2-like M001_003935 IPR014762 DNA mismatch repair, conserved site M001_003940 IPR039657 Dimethylallyltransferase M001_003940 IPR018022 IPP transferase M001_003940 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003945 IPR005001 RNA-binding protein Hfq M001_003945 IPR010920 LSM domain superfamily M001_003950 IPR032305 GTP-binding protein, middle domain M001_003950 IPR035647 EF-G domain III/V-like M001_003950 IPR006073 GTP binding domain M001_003950 IPR016496 GTPase HflX M001_003950 IPR025121 GTPase HflX, N-terminal M001_003950 IPR042108 GTPase HflX, N-terminal domain superfamily M001_003950 IPR030394 HflX-type guanine nucleotide-binding (G) domain M001_003950 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_003955 IPR001107 Band 7 domain M001_003955 IPR036013 Band 7/SPFH domain superfamily M001_003955 IPR001972 Stomatin family M001_003955 IPR010201 HflK M001_003955 IPR020980 Menbrane protein HflK, N-terminal M001_003960 IPR001107 Band 7 domain M001_003960 IPR010200 HflC M001_003960 IPR036013 Band 7/SPFH domain superfamily M001_003965 IPR019201 Protein of unknown function DUF2065 M001_003970 IPR033749 Polyprenyl synthetase, conserved site M001_003970 IPR008949 Isoprenoid synthase domain superfamily M001_003970 IPR000092 Polyprenyl synthetase M001_003975 IPR018258 Ribosomal protein L21, conserved site M001_003975 IPR028909 Ribosomal protein L21-like M001_003975 IPR001787 Ribosomal protein L21 M001_003975 IPR036164 L21-like superfamily M001_003980 IPR001684 Ribosomal protein L27 M001_003980 IPR018261 Ribosomal protein L27, conserved site M001_003985 IPR031167 OBG-type guanine nucleotide-binding (G) domain M001_003985 IPR035101 GTP-binding protein, Obg-type M001_003985 IPR006073 GTP binding domain M001_003985 IPR036726 GTP1/OBG domain superfamily M001_003985 IPR006169 GTP1/OBG domain M001_003985 IPR006074 GTP1/OBG, conserved site M001_003985 IPR014100 GTP-binding protein Obg/CgtA M001_003985 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_004000 IPR036661 Luciferase-like domain superfamily M001_004000 IPR011251 Luciferase-like domain M001_004000 IPR019949 Luciferase family oxidoreductase, group 1 M001_004015 IPR029052 Metallo-dependent phosphatase-like M001_004015 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M001_004015 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) M001_004020 IPR023065 Uncharacterised protein family ApaG M001_004020 IPR036767 ApaG domain superfamily M001_004020 IPR007474 ApaG domain M001_004025 IPR011530 Ribosomal RNA adenine dimethylase M001_004025 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal M001_004025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_004025 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site M001_004025 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm M001_004025 IPR023165 rRNA adenine dimethylase-like M001_004030 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase M001_004030 IPR005255 PdxA family M001_004035 IPR027304 Trigger factor/SurA domain superfamily M001_004035 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type M001_004035 IPR015391 SurA N-terminal M001_004035 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site M001_004035 IPR023034 Peptidyl-prolyl isomerase SurA M001_004040 IPR005653 Organic solvent tolerance-like, N-terminal M001_004040 IPR007543 LptD, C-terminal M001_004040 IPR020889 LPS-assembly protein LptD M001_004045 IPR002575 Aminoglycoside phosphotransferase M001_004045 IPR011009 Protein kinase-like domain superfamily M001_004050 IPR005835 Nucleotidyl transferase domain M001_004050 IPR029044 Nucleotide-diphospho-sugar transferases M001_004055 IPR029024 TerB-like M001_004055 IPR036869 Chaperone J-domain superfamily M001_004055 IPR001623 DnaJ domain M001_004055 IPR007791 Co-chaperone DjlA, N-terminal M001_004055 IPR023749 Co-chaperone DjlA M001_004060 IPR001160 Peptidase M20C, Xaa-His dipeptidase M001_004060 IPR011650 Peptidase M20, dimerisation domain M001_004060 IPR002933 Peptidase M20 M001_004065 IPR023747 Xanthine-guanine phosphoribosyltransferase M001_004065 IPR029057 Phosphoribosyltransferase-like M001_004065 IPR000836 Phosphoribosyltransferase domain M001_004075 IPR038208 Sigma factor-binding protein Crl superfamily M001_004075 IPR009986 Sigma factor-binding transcriptional regulator Crl M001_004080 IPR002478 PUA domain M001_004080 IPR015947 PUA-like superfamily M001_004080 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase M001_004080 IPR001048 Aspartate/glutamate/uridylate kinase M001_004080 IPR011529 Glutamate 5-kinase M001_004080 IPR036974 PUA domain superfamily M001_004080 IPR001057 Glutamate/acetylglutamate kinase M001_004080 IPR041739 Glutamate-5-kinase domain M001_004080 IPR019797 Glutamate 5-kinase, conserved site M001_004080 IPR036393 Acetylglutamate kinase-like superfamily M001_004085 IPR016163 Aldehyde dehydrogenase, C-terminal M001_004085 IPR015590 Aldehyde dehydrogenase domain M001_004085 IPR016161 Aldehyde/histidinol dehydrogenase M001_004085 IPR000965 GPR domain M001_004085 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site M001_004085 IPR012134 Glutamate-5-semialdehyde dehydrogenase M001_004085 IPR016162 Aldehyde dehydrogenase, N-terminal M001_004100 IPR036361 SAP domain superfamily M001_004100 IPR018668 DNA-binding protein VF530-like M001_004105 IPR003817 Phosphatidylserine decarboxylase-related M001_004105 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 M001_004105 IPR033177 Phosphatidylserine decarboxylase M001_004110 IPR004881 Ribosome biogenesis GTPase RsgA M001_004110 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain M001_004110 IPR010914 RsgA GTPase domain M001_004110 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_004115 IPR022894 Oligoribonuclease M001_004115 IPR012337 Ribonuclease H-like superfamily M001_004115 IPR036397 Ribonuclease H superfamily M001_004115 IPR013520 Exonuclease, RNase T/DNA polymerase III M001_004155 IPR019844 Cold-shock (CSD) domain M001_004155 IPR002059 Cold-shock protein, DNA-binding M001_004155 IPR011129 Cold shock domain M001_004155 IPR012340 Nucleic acid-binding, OB-fold M001_004155 IPR012156 Cold shock, CspA M001_004165 IPR003660 HAMP domain M001_004165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_004170 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding M001_004170 IPR033910 Glutamyl-tRNA synthetase M001_004170 IPR000924 Glutamyl/glutaminyl-tRNA synthetase M001_004170 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 M001_004170 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain M001_004170 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial M001_004170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_004170 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_004175 IPR026033 Azaguanine-like transporters M001_004175 IPR006043 Xanthine/uracil/vitamin C permease M001_004185 IPR032781 ABC-transporter extension domain M001_004185 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_004185 IPR003439 ABC transporter-like M001_004185 IPR022374 Energy-dependent translational throttle protein EttA M001_004185 IPR003593 AAA+ ATPase domain M001_004185 IPR017871 ABC transporter, conserved site M001_004200 IPR023346 Lysozyme-like domain superfamily M001_004200 IPR008258 Transglycosylase SLT domain 1 M001_004200 IPR000189 Prokaryotic transglycosylase, active site M001_004210 IPR018648 Protein of unknown function DUF2076 M001_004215 IPR001509 NAD-dependent epimerase/dehydratase M001_004215 IPR036291 NAD(P)-binding domain superfamily M001_004220 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_004220 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type M001_004220 IPR036291 NAD(P)-binding domain superfamily M001_004220 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal M001_004220 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation M001_004220 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily M001_004220 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal M001_004220 IPR017476 UDP-glucose/GDP-mannose dehydrogenase M001_004230 IPR003593 AAA+ ATPase domain M001_004230 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M001_004230 IPR017871 ABC transporter, conserved site M001_004230 IPR003439 ABC transporter-like M001_004230 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_004235 IPR003593 AAA+ ATPase domain M001_004235 IPR003439 ABC transporter-like M001_004235 IPR017871 ABC transporter, conserved site M001_004235 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M001_004235 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_004245 IPR035906 MetI-like superfamily M001_004245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_004245 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M001_004250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_004250 IPR035906 MetI-like superfamily M001_004255 IPR010101 TonB-dependent vitamin B12 transporter BtuB M001_004255 IPR037066 TonB-dependent receptor, plug domain superfamily M001_004255 IPR012910 TonB-dependent receptor, plug domain M001_004255 IPR010917 TonB-dependent receptor, conserved site M001_004255 IPR010916 TonB box, conserved site M001_004255 IPR000531 TonB-dependent receptor-like, beta-barrel M001_004255 IPR039426 Vitamin B12 transporter BtuB-like M001_004255 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M001_004265 IPR002898 MotA/TolQ/ExbB proton channel M001_004270 IPR002898 MotA/TolQ/ExbB proton channel M001_004275 IPR003400 Biopolymer transport protein ExbD/TolR M001_004290 IPR005490 L,D-transpeptidase catalytic domain M001_004290 IPR041597 L,D-transpeptidase C-terminal domain M001_004290 IPR038063 L,D-transpeptidase catalytic domain-like M001_004295 IPR004635 Peptidase S49, SppA M001_004295 IPR002142 Peptidase S49 M001_004295 IPR033854 Signal peptide peptidase A M001_004295 IPR004634 Peptidase S49, protease IV M001_004295 IPR029045 ClpP/crotonase-like domain superfamily M001_004300 IPR036188 FAD/NAD(P)-binding domain superfamily M001_004300 IPR013785 Aldolase-type TIM barrel M001_004300 IPR023753 FAD/NAD(P)-binding domain M001_004300 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M001_004305 IPR026021 Putative NAD(P)H nitroreductase YdjA-like M001_004305 IPR029479 Nitroreductase M001_004305 IPR000415 Nitroreductase-like M001_004310 IPR011004 Trimeric LpxA-like superfamily M001_004310 IPR001451 Hexapeptide repeat M001_004310 IPR018357 Hexapeptide transferase, conserved site M001_004310 IPR024688 Maltose/galactoside acetyltransferase M001_004315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_004315 IPR004498 Ribosomal protein L11 methyltransferase M001_004325 IPR011032 GroES-like superfamily M001_004325 IPR013149 Alcohol dehydrogenase, C-terminal M001_004325 IPR020843 Polyketide synthase, enoylreductase domain M001_004325 IPR036291 NAD(P)-binding domain superfamily M001_004325 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 M001_004325 IPR013154 Alcohol dehydrogenase, N-terminal M001_004325 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site M001_004330 IPR000847 Transcription regulator HTH, LysR M001_004330 IPR036388 Winged helix-like DNA-binding domain superfamily M001_004330 IPR005119 LysR, substrate-binding M001_004330 IPR036390 Winged helix DNA-binding domain superfamily M001_004335 IPR001996 Phosphotransferase system, IIB component, type 1 M001_004335 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component M001_004335 IPR013013 Phosphotransferase system, EIIC component, type 1 M001_004335 IPR011055 Duplicated hybrid motif M001_004335 IPR036878 Glucose permease domain IIB M001_004335 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M001_004335 IPR003352 Phosphotransferase system, EIIC M001_004335 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M001_004340 IPR011849 Sodium/pantothenate symporter M001_004340 IPR001734 Sodium/solute symporter M001_004340 IPR038377 Sodium/glucose symporter superfamily M001_004340 IPR018212 Sodium/solute symporter, conserved site M001_004350 IPR011764 Biotin carboxylation domain M001_004350 IPR005482 Biotin carboxylase, C-terminal M001_004350 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain M001_004350 IPR011761 ATP-grasp fold M001_004350 IPR011054 Rudiment single hybrid motif M001_004350 IPR013815 ATP-grasp fold, subdomain 1 M001_004350 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase M001_004350 IPR016185 Pre-ATP-grasp domain superfamily M001_004350 IPR005481 Biotin carboxylase-like, N-terminal domain M001_004355 IPR001249 Acetyl-CoA biotin carboxyl carrier M001_004355 IPR011053 Single hybrid motif M001_004355 IPR000089 Biotin/lipoyl attachment M001_004355 IPR001882 Biotin-binding site M001_004360 IPR001874 Dehydroquinase, class II M001_004360 IPR018509 Dehydroquinase, class II, conserved site M001_004360 IPR036441 Dehydroquinase, class II superfamily M001_004365 IPR011904 Acetate-CoA ligase M001_004365 IPR042099 AMP-dependent synthetase-like superfamily M001_004365 IPR000873 AMP-dependent synthetase/ligase M001_004365 IPR020845 AMP-binding, conserved site M001_004365 IPR025110 AMP-binding enzyme, C-terminal domain M001_004365 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain M001_004375 IPR001633 EAL domain M001_004375 IPR000160 GGDEF domain M001_004375 IPR035919 EAL domain superfamily M001_004375 IPR029787 Nucleotide cyclase M001_004375 IPR005330 MHYT domain M001_004385 IPR036411 TorD-like superfamily M001_004385 IPR036386 HscB, C-terminal domain superfamily M001_004385 IPR020945 DMSO/Nitrate reductase chaperone M001_004385 IPR023069 Chaperone TorD M001_004390 IPR011887 Trimethylamine-N-oxide reductase TorA M001_004390 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain M001_004390 IPR041460 Molybdopterin oxidoreductase, N-terminal M001_004390 IPR006657 Molybdopterin dinucleotide-binding domain M001_004390 IPR006656 Molybdopterin oxidoreductase M001_004390 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase M001_004390 IPR006311 Twin-arginine translocation pathway, signal sequence M001_004390 IPR009010 Aspartate decarboxylase-like domain superfamily M001_004390 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site M001_004395 IPR038266 NapC/NirT cytochrome c superfamily M001_004395 IPR005126 NapC/NirT cytochrome c, N-terminal M001_004395 IPR036280 Multiheme cytochrome superfamily M001_004395 IPR011031 Multihaem cytochrome M001_004395 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK M001_004400 IPR001867 OmpR/PhoB-type DNA-binding domain M001_004400 IPR011006 CheY-like superfamily M001_004400 IPR039420 Transcriptional regulatory protein WalR-like M001_004400 IPR036388 Winged helix-like DNA-binding domain superfamily M001_004400 IPR001789 Signal transduction response regulator, receiver domain M001_004410 IPR028082 Periplasmic binding protein-like I M001_004410 IPR014301 TMAO reductase system, periplasmic protein TorT M001_004410 IPR001761 Periplasmic binding protein/LacI sugar binding domain M001_004415 IPR038188 TorS, sensor domain superfamily M001_004415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_004415 IPR003594 Histidine kinase/HSP90-like ATPase M001_004415 IPR003660 HAMP domain M001_004415 IPR001789 Signal transduction response regulator, receiver domain M001_004415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_004415 IPR005467 Histidine kinase domain M001_004415 IPR036641 HPT domain superfamily M001_004415 IPR037952 Sensor histidine kinase TorS, sensor domain M001_004415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_004415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_004415 IPR011006 CheY-like superfamily M001_004415 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_004425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_004425 IPR015424 Pyridoxal phosphate-dependent transferase M001_004425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_004425 IPR001085 Serine hydroxymethyltransferase M001_004425 IPR039429 Serine hydroxymethyltransferase-like domain M001_004425 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site M001_004430 IPR003796 Ribonucleotide reductase regulator NrdR-like M001_004430 IPR005144 ATP-cone domain M001_004435 IPR024072 Dihydrofolate reductase-like domain superfamily M001_004435 IPR011549 Riboflavin-specific deaminase, C-terminal M001_004435 IPR004794 Riboflavin biosynthesis protein RibD M001_004435 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal M001_004435 IPR016193 Cytidine deaminase-like M001_004435 IPR002125 Cytidine and deoxycytidylate deaminase domain M001_004435 IPR016192 APOBEC/CMP deaminase, zinc-binding M001_004440 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M001_004440 IPR001783 Lumazine-binding protein M001_004440 IPR026017 Lumazine-binding domain M001_004440 IPR017938 Riboflavin synthase-like beta-barrel M001_004445 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M001_004445 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB M001_004445 IPR032677 GTP cyclohydrolase II M001_004445 IPR036144 RibA-like superfamily M001_004455 IPR002180 Lumazine/riboflavin synthase M001_004455 IPR034964 Lumazine synthase M001_004455 IPR036467 Lumazine/riboflavin synthase superfamily M001_004460 IPR006027 NusB/RsmB/TIM44 M001_004460 IPR011605 NusB antitermination factor M001_004460 IPR035926 NusB-like superfamily M001_004465 IPR036676 PurM-like, C-terminal domain superfamily M001_004465 IPR010918 PurM-like, C-terminal domain M001_004465 IPR016188 PurM-like, N-terminal domain M001_004465 IPR006283 Thiamine-monophosphate kinase M001_004465 IPR036921 PurM-like, N-terminal domain superfamily M001_004470 IPR036681 PgpA-like superfamily M001_004470 IPR007686 YutG/PgpA domain M001_004470 IPR026037 Phosphatidylglycerophosphatase A M001_004475 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M001_004475 IPR003439 ABC transporter-like M001_004475 IPR003593 AAA+ ATPase domain M001_004475 IPR017871 ABC transporter, conserved site M001_004475 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_004480 IPR000914 Solute-binding protein family 5 domain M001_004480 IPR030678 Peptide/nickel binding protein, MppA-type M001_004480 IPR023765 Solute-binding protein family 5, conserved site M001_004480 IPR039424 Solute-binding protein family 5 M001_004490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_004490 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M001_004490 IPR035906 MetI-like superfamily M001_004495 IPR005475 Transketolase-like, pyrimidine-binding domain M001_004495 IPR020826 Transketolase binding site M001_004495 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M001_004495 IPR033248 Transketolase, C-terminal domain M001_004495 IPR029061 Thiamin diphosphate-binding fold M001_004495 IPR005477 Deoxyxylulose-5-phosphate synthase M001_004500 IPR033749 Polyprenyl synthetase, conserved site M001_004500 IPR000092 Polyprenyl synthetase M001_004500 IPR008949 Isoprenoid synthase domain superfamily M001_004505 IPR037004 Exonuclease VII, small subunit superfamily M001_004505 IPR003761 Exonuclease VII, small subunit M001_004510 IPR002898 MotA/TolQ/ExbB proton channel M001_004510 IPR000540 Flagellar motor protein MotA, conserved site M001_004515 IPR036737 OmpA-like domain superfamily M001_004515 IPR006665 OmpA-like domain M001_004515 IPR025713 Motility protein B, N-terminal domain M001_004520 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily M001_004520 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily M001_004520 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal M001_004520 IPR023459 Transcription elongation factor GreA/GreB family M001_004520 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal M001_004520 IPR028624 Transcription elongation factor GreA/GreB M001_004520 IPR006359 Transcription elongation factor GreA M001_004520 IPR018151 Transcription elongation factor, GreA/GreB, conserved site M001_004530 IPR035920 YhbY-like superfamily M001_004530 IPR017924 RNA-binding protein YhbY M001_004530 IPR001890 RNA-binding, CRM domain M001_004535 IPR015507 Ribosomal RNA large subunit methyltransferase E M001_004535 IPR002877 Ribosomal RNA methyltransferase FtsJ domain M001_004535 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria M001_004535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_004540 IPR003593 AAA+ ATPase domain M001_004540 IPR041569 AAA ATPase, AAA+ lid domain M001_004540 IPR003959 ATPase, AAA-type, core M001_004540 IPR003960 ATPase, AAA-type, conserved site M001_004540 IPR005936 Peptidase, FtsH M001_004540 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_004540 IPR011546 Peptidase M41, FtsH extracellular M001_004540 IPR000642 Peptidase M41 M001_004540 IPR037219 Peptidase M41-like M001_004545 IPR000489 Pterin-binding domain M001_004545 IPR011005 Dihydropteroate synthase-like M001_004545 IPR006390 Dihydropteroate synthase M001_004550 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M001_004550 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M001_004550 IPR005843 Alpha-D-phosphohexomutase, C-terminal M001_004550 IPR005841 Alpha-D-phosphohexomutase superfamily M001_004550 IPR016066 Alpha-D-phosphohexomutase, conserved site M001_004550 IPR006352 Phosphoglucosamine mutase, bacterial type M001_004550 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M001_004550 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M001_004550 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M001_004555 IPR020861 Triosephosphate isomerase, active site M001_004555 IPR035990 Triosephosphate isomerase superfamily M001_004555 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic M001_004555 IPR000652 Triosephosphate isomerase M001_004555 IPR013785 Aldolase-type TIM barrel M001_004560 IPR004692 Preprotein translocase SecG subunit M001_004575 IPR035956 RimP, N-terminal domain superfamily M001_004575 IPR003728 Ribosome maturation factor RimP M001_004575 IPR028998 Ribosome maturation factor RimP, C-terminal M001_004575 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily M001_004575 IPR028989 Ribosome maturation factor RimP, N-terminal M001_004580 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical M001_004580 IPR015946 K homology domain-like, alpha/beta M001_004580 IPR025249 KH domain, NusA-like M001_004580 IPR003029 S1 domain M001_004580 IPR012340 Nucleic acid-binding, OB-fold M001_004580 IPR030842 Transcription termination/antitermination protein NusA, bacterial M001_004580 IPR010213 Transcription termination factor NusA M001_004580 IPR022967 RNA-binding domain, S1 M001_004580 IPR010214 Transcription termination factor NusA, C-terminal duplication M001_004580 IPR013735 Transcription factor NusA, N-terminal M001_004580 IPR009019 K homology domain superfamily, prokaryotic type M001_004580 IPR036555 NusA, N-terminal domain superfamily M001_004585 IPR023115 Translation initiation factor IF- 2, domain 3 M001_004585 IPR036925 Translation initiation factor IF-2, domain 3 superfamily M001_004585 IPR009000 Translation protein, beta-barrel domain superfamily M001_004585 IPR015760 Translation initiation factor IF- 2 M001_004585 IPR000178 Translation initiation factor aIF-2, bacterial-like M001_004585 IPR000795 Transcription factor, GTP-binding domain M001_004585 IPR005225 Small GTP-binding protein domain M001_004585 IPR013575 Initiation factor 2 associated domain, bacterial M001_004585 IPR009061 Putative DNA-binding domain superfamily M001_004585 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_004585 IPR006847 Translation initiation factor IF-2, N-terminal M001_004590 IPR015946 K homology domain-like, alpha/beta M001_004590 IPR000238 Ribosome-binding factor A M001_004590 IPR023799 Ribosome-binding factor A domain superfamily M001_004590 IPR020053 Ribosome-binding factor A, conserved site M001_004595 IPR014780 tRNA pseudouridine synthase II, TruB M001_004595 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal M001_004595 IPR032819 tRNA pseudouridylate synthase B, C-terminal M001_004595 IPR015947 PUA-like superfamily M001_004595 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_004595 IPR036974 PUA domain superfamily M001_004595 IPR002501 Pseudouridine synthase II, N-terminal M001_004600 IPR009068 S15/NS1, RNA-binding M001_004600 IPR005290 Ribosomal protein S15, bacterial-type M001_004600 IPR000589 Ribosomal protein S15 M001_004605 IPR003029 S1 domain M001_004605 IPR004088 K Homology domain, type 1 M001_004605 IPR020568 Ribosomal protein S5 domain 2-type fold M001_004605 IPR015847 Exoribonuclease, phosphorolytic domain 2 M001_004605 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily M001_004605 IPR001247 Exoribonuclease, phosphorolytic domain 1 M001_004605 IPR022967 RNA-binding domain, S1 M001_004605 IPR004087 K Homology domain M001_004605 IPR036345 Exoribonuclease, PH domain 2 superfamily M001_004605 IPR036612 K Homology domain, type 1 superfamily M001_004605 IPR012340 Nucleic acid-binding, OB-fold M001_004605 IPR012162 Polyribonucleotide nucleotidyltransferase M001_004605 IPR027408 PNPase/RNase PH domain superfamily M001_004605 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain M001_004610 IPR001789 Signal transduction response regulator, receiver domain M001_004610 IPR011006 CheY-like superfamily M001_004610 IPR035909 Methylesterase CheB, C-terminal M001_004610 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type M001_004610 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase M001_004615 IPR011324 Cytotoxic necrotizing factor-like, catalytic M001_004615 IPR038592 CheD-like superfamily M001_004615 IPR005659 Chemoreceptor glutamine deamidase CheD M001_004620 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal M001_004620 IPR000780 MCP methyltransferase, CheR-type M001_004620 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily M001_004620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_004620 IPR026024 Chemotaxis protein methyltransferase CheR M001_004620 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal M001_004625 IPR003660 HAMP domain M001_004625 IPR004090 Chemotaxis methyl-accepting receptor M001_004625 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_004630 IPR039315 Chemotaxis protein CheW M001_004630 IPR036061 CheW-like domain superfamily M001_004630 IPR002545 CheW-like domain M001_004635 IPR004090 Chemotaxis methyl-accepting receptor M001_004635 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M001_004635 IPR003660 HAMP domain M001_004635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_004635 IPR000727 Target SNARE coiled-coil homology domain M001_004640 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_004640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_004640 IPR005467 Histidine kinase domain M001_004640 IPR036641 HPT domain superfamily M001_004640 IPR003594 Histidine kinase/HSP90-like ATPase M001_004640 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_004640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_004640 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily M001_004640 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily M001_004640 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding M001_004640 IPR036061 CheW-like domain superfamily M001_004640 IPR035891 CheY-binding domain of CheA M001_004640 IPR002545 CheW-like domain M001_004640 IPR004105 Histidine kinase CheA-like, homodimeric domain M001_004650 IPR001789 Signal transduction response regulator, receiver domain M001_004650 IPR011006 CheY-like superfamily M001_004655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_004655 IPR029151 Periplasmic sensor-like domain superfamily M001_004655 IPR003660 HAMP domain M001_004655 IPR033479 Double Cache domain 1 M001_004665 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain M001_004665 IPR036390 Winged helix DNA-binding domain superfamily M001_004665 IPR036388 Winged helix-like DNA-binding domain superfamily M001_004665 IPR005119 LysR, substrate-binding M001_004665 IPR000847 Transcription regulator HTH, LysR M001_004670 IPR004778 Homoserine/Threonine efflux protein M001_004670 IPR001123 Amino acid exporter protein, LeuE-type M001_004675 IPR001539 Peptidase U32 M001_004675 IPR020988 Peptidase U32, collagenase M001_004680 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding M001_004680 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site M001_004680 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain M001_004680 IPR036388 Winged helix-like DNA-binding domain superfamily M001_004680 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily M001_004680 IPR023546 Methylated-DNA--protein-cysteine methyltransferase M001_004680 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain M001_004685 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily M001_004685 IPR011257 DNA glycosylase M001_004685 IPR035451 Ada-like domain superfamily M001_004685 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal M001_004685 IPR004026 Ada DNA repair, metal-binding M001_004685 IPR003265 HhH-GPD domain M001_004685 IPR009057 Homeobox-like domain superfamily M001_004685 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal M001_004685 IPR018060 DNA binding HTH domain, AraC-type M001_004685 IPR018062 HTH domain AraC-type, conserved site M001_004690 IPR001082 Fimbrial protein pilin M001_004690 IPR012902 Prokaryotic N-terminal methylation site M001_004720 IPR001333 Peptidase M32, carboxypeptidase Taq M001_004745 IPR036291 NAD(P)-binding domain superfamily M001_004745 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_004745 IPR002347 Short-chain dehydrogenase/reductase SDR M001_004750 IPR023614 Porin domain superfamily M001_004750 IPR005318 Outer membrane porin, bacterial M001_004755 IPR003660 HAMP domain M001_004755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_004755 IPR032255 Helical bimodular sensor domain M001_004765 IPR036624 Hcp1-like superfamily M001_004765 IPR008514 Type VI secretion system effector, Hcp M001_004770 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset M001_004770 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein M001_004770 IPR037026 Vgr protein, OB-fold domain superfamily M001_004770 IPR006531 Gp5 N-terminal M001_004815 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase M001_004815 IPR036263 Chorismate mutase type II superfamily M001_004815 IPR002701 Chorismate mutase II, prokaryotic-type M001_004815 IPR010952 Chorismate mutase, gammaproteobacteria M001_004815 IPR001086 Prephenate dehydratase M001_004815 IPR018528 Prephenate dehydratase, conserved site M001_004815 IPR002912 ACT domain M001_004815 IPR036979 Chorismate mutase domain superfamily M001_004830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_004830 IPR018317 Queuosine biosynthesis protein QueC M001_004845 IPR013560 Domain of unknown function DUF1722 M001_004850 IPR009061 Putative DNA-binding domain superfamily M001_004850 IPR000551 MerR-type HTH domain M001_004855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_004855 IPR006050 DNA photolyase, N-terminal M001_004855 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal M001_004855 IPR002081 Cryptochrome/DNA photolyase class 1 M001_004855 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain M001_004855 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily M001_004855 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily M001_004865 IPR036291 NAD(P)-binding domain superfamily M001_004865 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_004865 IPR002347 Short-chain dehydrogenase/reductase SDR M001_004880 IPR003333 Mycolic acid cyclopropane synthase M001_004880 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_004910 IPR042159 Flavin-trafficking protein ApbE M001_004910 IPR024932 Flavin transferase ApbE M001_004910 IPR003374 ApbE-like superfamily M001_004915 IPR017927 FAD-binding domain, ferredoxin reductase-type M001_004915 IPR017938 Riboflavin synthase-like beta-barrel M001_004915 IPR001433 Oxidoreductase FAD/NAD(P)-binding M001_004915 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F M001_004915 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M001_004915 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M001_004915 IPR012675 Beta-grasp domain superfamily M001_004915 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_004915 IPR036010 2Fe-2S ferredoxin-like superfamily M001_004920 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E M001_004920 IPR003667 NqrDE/RnfAE M001_004925 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D M001_004925 IPR003667 NqrDE/RnfAE M001_004930 IPR007329 FMN-binding M001_004930 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C M001_004935 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B M001_004935 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD M001_004940 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A M001_004940 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain M001_004940 IPR011053 Single hybrid motif M001_004945 IPR036065 BolA-like superfamily M001_004945 IPR002634 BolA protein M001_004950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_004950 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD M001_004950 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_004950 IPR007848 Methyltransferase small domain M001_004960 IPR029000 Cyclophilin-like domain superfamily M001_004960 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase M001_004960 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site M001_004960 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain M001_004965 IPR020846 Major facilitator superfamily domain M001_004965 IPR011701 Major facilitator superfamily M001_004965 IPR036259 MFS transporter superfamily M001_004965 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 M001_004970 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily M001_004970 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like M001_004970 IPR003055 Nucleoside-specific channel-forming protein Tsx M001_004975 IPR035570 UPF0234, N-terminal M001_004975 IPR036183 YajQ-like superfamily M001_004975 IPR035571 UPF0234-like, C-terminal M001_004975 IPR007551 Protein of unknown function DUF520 M001_004980 IPR013752 Ketopantoate reductase, C-terminal domain M001_004980 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M001_004980 IPR003710 Ketopantoate reductase ApbA/PanE M001_004980 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_004980 IPR013332 Ketopantoate reductase, N-terminal domain M001_004980 IPR036291 NAD(P)-binding domain superfamily M001_004985 IPR006287 Protein/nucleic acid deglycase DJ-1 M001_004985 IPR029062 Class I glutamine amidotransferase-like M001_004985 IPR002818 DJ-1/PfpI M001_004995 IPR024728 DNA polymerase type-Y, HhH motif M001_004995 IPR022880 DNA polymerase IV M001_004995 IPR017961 DNA polymerase, Y-family, little finger domain M001_004995 IPR001126 UmuC domain M001_004995 IPR036775 DNA polymerase, Y-family, little finger domain superfamily M001_005000 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_005000 IPR003660 HAMP domain M001_005005 IPR005119 LysR, substrate-binding M001_005005 IPR000847 Transcription regulator HTH, LysR M001_005005 IPR036390 Winged helix DNA-binding domain superfamily M001_005005 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005015 IPR006696 Protein of unknown function DUF423 M001_005020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_005020 IPR011224 Ribosomal RNA large subunit methyltransferase M M001_005020 IPR002877 Ribosomal RNA methyltransferase FtsJ domain M001_005020 IPR040739 RlmM ferredoxin-like domain M001_005030 IPR024473 Transposase, IS4, N-terminal M001_005030 IPR002559 Transposase, IS4-like M001_005030 IPR012337 Ribonuclease H-like superfamily M001_005035 IPR040978 Hypothetical protein TT1725 M001_005035 IPR024084 Isopropylmalate dehydrogenase-like domain M001_005035 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site M001_005040 IPR008918 Helix-hairpin-helix motif, class 2 M001_005040 IPR029060 PIN-like domain superfamily M001_005040 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M001_005040 IPR002421 5'-3' exonuclease, N-terminal M001_005040 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal M001_005040 IPR038969 Flap endonuclease M001_005040 IPR022895 Flap endonuclease Xni M001_005040 IPR020045 DNA polymerase I-like, H3TH domain M001_005045 IPR021826 Domain of unknown function DUF3412 M001_005045 IPR031100 LOG family M001_005045 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal M001_005045 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily M001_005050 IPR033424 Membrane-associated sensor domain M001_005050 IPR000160 GGDEF domain M001_005050 IPR029787 Nucleotide cyclase M001_005060 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 M001_005060 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal M001_005060 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF M001_005065 IPR038228 Syd superfamily M001_005065 IPR009948 Syd M001_005070 IPR016908 Uncharacterised conserved protein UCP029037 M001_005095 IPR036814 YqcC-like superfamily M001_005095 IPR023376 YqcC-like domain M001_005095 IPR007384 Protein of unknown function UCP006257 M001_005100 IPR006145 Pseudouridine synthase, RsuA/RluA M001_005100 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M001_005100 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_005105 IPR001094 Flavodoxin-like M001_005105 IPR008254 Flavodoxin/nitric oxide synthase M001_005105 IPR029039 Flavoprotein-like superfamily M001_005110 IPR036998 Porin, LamB-type superfamily M001_005110 IPR003192 Porin, LamB-type M001_005110 IPR023738 Maltoporin M001_005115 IPR010794 Maltose operon periplasmic M001_005120 IPR001996 Phosphotransferase system, IIB component, type 1 M001_005120 IPR013013 Phosphotransferase system, EIIC component, type 1 M001_005120 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M001_005120 IPR003352 Phosphotransferase system, EIIC M001_005120 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M001_005120 IPR036878 Glucose permease domain IIB M001_005120 IPR011299 PTS system glucose-specific IIBC component M001_005125 IPR020911 Uncharacterised protein family UPF0325 M001_005130 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 M001_005130 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family M001_005130 IPR001451 Hexapeptide repeat M001_005130 IPR018357 Hexapeptide transferase, conserved site M001_005130 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily M001_005130 IPR011004 Trimeric LpxA-like superfamily M001_005135 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme M001_005135 IPR002934 Polymerase, nucleotidyl transferase domain M001_005135 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase M001_005135 IPR006674 HD domain M001_005135 IPR003607 HD/PDEase domain M001_005135 IPR002912 ACT domain M001_005140 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 M001_005140 IPR036005 Creatinase/aminopeptidase-like M001_005140 IPR000994 Peptidase M24 M001_005140 IPR001714 Peptidase M24, methionine aminopeptidase M001_005145 IPR001865 Ribosomal protein S2 M001_005145 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid M001_005145 IPR018130 Ribosomal protein S2, conserved site M001_005145 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily M001_005150 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation M001_005150 IPR018101 Translation elongation factor Ts, conserved site M001_005150 IPR009060 UBA-like superfamily M001_005150 IPR036402 Elongation factor Ts, dimerisation domain superfamily M001_005150 IPR001816 Translation elongation factor EFTs/EF1B M001_005155 IPR001048 Aspartate/glutamate/uridylate kinase M001_005155 IPR036393 Acetylglutamate kinase-like superfamily M001_005155 IPR015963 Uridylate kinase, bacteria M001_005155 IPR011817 Uridylate kinase M001_005160 IPR036191 RRF superfamily M001_005160 IPR002661 Ribosome recycling factor M001_005160 IPR023584 Ribosome recycling factor domain M001_005165 IPR036424 Decaprenyl diphosphate synthase-like superfamily M001_005165 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site M001_005165 IPR001441 Decaprenyl diphosphate synthase-like M001_005170 IPR000374 Phosphatidate cytidylyltransferase M001_005175 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal M001_005175 IPR036169 DXP reductoisomerase, C-terminal domain superfamily M001_005175 IPR026877 DXP reductoisomerase C-terminal domain M001_005175 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal M001_005175 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase M001_005175 IPR036291 NAD(P)-binding domain superfamily M001_005180 IPR008915 Peptidase M50 M001_005180 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase M001_005180 IPR036034 PDZ superfamily M001_005180 IPR041489 PDZ domain 6 M001_005180 IPR001478 PDZ domain M001_005185 IPR023707 Outer membrane protein assembly factor BamA M001_005185 IPR000184 Bacterial surface antigen (D15) M001_005185 IPR010827 POTRA domain, BamA/TamA-like M001_005185 IPR039910 Surface antigen D15-like M001_005185 IPR034746 POTRA domain M001_005190 IPR005632 Chaperone protein Skp M001_005190 IPR024930 Skp domain superfamily M001_005195 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region M001_005195 IPR011004 Trimeric LpxA-like superfamily M001_005195 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD M001_005195 IPR018357 Hexapeptide transferase, conserved site M001_005195 IPR001451 Hexapeptide repeat M001_005200 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ M001_005200 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ M001_005200 IPR029069 HotDog domain superfamily M001_005205 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily M001_005205 IPR011004 Trimeric LpxA-like superfamily M001_005205 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase M001_005205 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal M001_005205 IPR001451 Hexapeptide repeat M001_005210 IPR003835 Glycosyl transferase, family 19 M001_005215 IPR012337 Ribonuclease H-like superfamily M001_005215 IPR024567 Ribonuclease HII/HIII domain M001_005215 IPR001352 Ribonuclease HII/HIII M001_005215 IPR022898 Ribonuclease HII M001_005215 IPR036397 Ribonuclease H superfamily M001_005220 IPR016195 Polymerase/histidinol phosphatase-like M001_005220 IPR004013 PHP domain M001_005220 IPR040982 DNA polymerase III alpha subunit finger domain M001_005220 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M001_005220 IPR004805 DNA polymerase III, alpha subunit M001_005220 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M001_005220 IPR029460 DNA polymerase, helix-hairpin-helix motif M001_005220 IPR003141 Polymerase/histidinol phosphatase, N-terminal M001_005220 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain M001_005225 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal M001_005225 IPR001095 Acetyl-CoA carboxylase, alpha subunit M001_005225 IPR029045 ClpP/crotonase-like domain superfamily M001_005235 IPR013785 Aldolase-type TIM barrel M001_005235 IPR004730 Transaldolase type 1 M001_005235 IPR018225 Transaldolase, active site M001_005235 IPR001585 Transaldolase/Fructose-6-phosphate aldolase M001_005240 IPR001463 Sodium:alanine symporter M001_005245 IPR002931 Transglutaminase-like M001_005245 IPR025403 Domain of unknown function DUF4129 M001_005245 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal M001_005245 IPR038765 Papain-like cysteine peptidase superfamily M001_005255 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_005255 IPR041628 ChlI/MoxR, AAA lid domain M001_005255 IPR011703 ATPase, AAA-3 M001_005260 IPR011701 Major facilitator superfamily M001_005260 IPR020846 Major facilitator superfamily domain M001_005260 IPR036259 MFS transporter superfamily M001_005260 IPR023697 Multidrug resistance protein MdtL M001_005265 IPR023746 Transcription regulator HTH, YidZ M001_005265 IPR005119 LysR, substrate-binding M001_005265 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain M001_005265 IPR036390 Winged helix DNA-binding domain superfamily M001_005265 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005265 IPR000847 Transcription regulator HTH, LysR M001_005270 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B M001_005270 IPR000109 Proton-dependent oligopeptide transporter family M001_005270 IPR036259 MFS transporter superfamily M001_005270 IPR005279 Dipeptide/tripeptide permease M001_005270 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site M001_005275 IPR012337 Ribonuclease H-like superfamily M001_005275 IPR037027 YqgF/RNase H-like domain superfamily M001_005275 IPR006641 YqgF/RNase H-like domain M001_005275 IPR005227 Putative pre-16S rRNA nuclease M001_005280 IPR003774 Protein of unknown function UPF0301 M001_005285 IPR006284 Glutathione synthetase, prokaryotic M001_005285 IPR011761 ATP-grasp fold M001_005285 IPR004218 Prokaryotic glutathione synthetase, ATP-binding M001_005285 IPR013815 ATP-grasp fold, subdomain 1 M001_005285 IPR016185 Pre-ATP-grasp domain superfamily M001_005285 IPR004215 Prokaryotic glutathione synthetase, N-terminal M001_005290 IPR015947 PUA-like superfamily M001_005290 IPR006700 Ribosomal RNA small subunit methyltransferase E M001_005290 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M001_005290 IPR029028 Alpha/beta knot methyltransferases M001_005295 IPR007346 Endonuclease I M001_005300 IPR023483 Uncharacterised protein family SprT M001_005300 IPR006640 SprT-like M001_005300 IPR035240 SprT-like, zinc ribbon domain M001_005305 IPR022628 S-adenosylmethionine synthetase, N-terminal M001_005305 IPR022631 S-adenosylmethionine synthetase, conserved site M001_005305 IPR022630 S-adenosylmethionine synthetase, C-terminal M001_005305 IPR022636 S-adenosylmethionine synthetase superfamily M001_005305 IPR002133 S-adenosylmethionine synthetase M001_005305 IPR022629 S-adenosylmethionine synthetase, central domain M001_005310 IPR033248 Transketolase, C-terminal domain M001_005310 IPR020826 Transketolase binding site M001_005310 IPR005478 Transketolase, bacterial-like M001_005310 IPR005475 Transketolase-like, pyrimidine-binding domain M001_005310 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M001_005310 IPR005474 Transketolase, N-terminal M001_005310 IPR033247 Transketolase family M001_005310 IPR029061 Thiamin diphosphate-binding fold M001_005320 IPR006056 RidA family M001_005320 IPR019897 RidA, conserved site M001_005320 IPR035959 RutC-like superfamily M001_005320 IPR006175 YjgF/YER057c/UK114 family M001_005330 IPR005338 Anhydro-N-acetylmuramic acid kinase M001_005335 IPR011055 Duplicated hybrid motif M001_005335 IPR018392 LysM domain M001_005335 IPR013731 Opacity-associated protein A, N-terminal M001_005335 IPR016047 Peptidase M23 M001_005340 IPR002305 Aminoacyl-tRNA synthetase, class Ic M001_005340 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_005340 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 M001_005340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_005340 IPR002942 RNA-binding S4 domain M001_005340 IPR036986 RNA-binding S4 domain superfamily M001_005340 IPR002307 Tyrosine-tRNA ligase M001_005340 IPR024088 Tyrosine-tRNA ligase, bacterial-type M001_005345 IPR036390 Winged helix DNA-binding domain superfamily M001_005345 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005345 IPR000847 Transcription regulator HTH, LysR M001_005345 IPR005119 LysR, substrate-binding M001_005345 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain M001_005350 IPR005128 Alpha-acetolactate decarboxylase M001_005355 IPR012782 Acetolactate synthase, catabolic M001_005355 IPR029035 DHS-like NAD/FAD-binding domain superfamily M001_005355 IPR029061 Thiamin diphosphate-binding fold M001_005355 IPR012000 Thiamine pyrophosphate enzyme, central domain M001_005355 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M001_005355 IPR000399 TPP-binding enzyme, conserved site M001_005355 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M001_005365 IPR036390 Winged helix DNA-binding domain superfamily M001_005365 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005365 IPR000847 Transcription regulator HTH, LysR M001_005365 IPR005119 LysR, substrate-binding M001_005370 IPR004694 Hydroxy amino acid transporter M001_005380 IPR001279 Metallo-beta-lactamase M001_005380 IPR013471 Ribonuclease Z/BN M001_005380 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M001_005385 IPR036390 Winged helix DNA-binding domain superfamily M001_005385 IPR000847 Transcription regulator HTH, LysR M001_005385 IPR005119 LysR, substrate-binding M001_005385 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005390 IPR002293 Amino acid/polyamine transporter I M001_005395 IPR000182 GNAT domain M001_005395 IPR016181 Acyl-CoA N-acyltransferase M001_005400 IPR017871 ABC transporter, conserved site M001_005400 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_005400 IPR003593 AAA+ ATPase domain M001_005400 IPR032524 ABC transporter Uup, C-terminal M001_005400 IPR032781 ABC-transporter extension domain M001_005400 IPR003439 ABC transporter-like M001_005400 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily M001_005405 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005405 IPR039420 Transcriptional regulatory protein WalR-like M001_005405 IPR011990 Tetratricopeptide-like helical domain superfamily M001_005405 IPR016032 Signal transduction response regulator, C-terminal effector M001_005405 IPR001867 OmpR/PhoB-type DNA-binding domain M001_005405 IPR040970 CadC C-terminal domain 1 M001_005410 IPR004754 Amino acid antiporter M001_005410 IPR002293 Amino acid/polyamine transporter I M001_005415 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_005415 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_005415 IPR015424 Pyridoxal phosphate-dependent transferase M001_005415 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily M001_005415 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal M001_005415 IPR000310 Orn/Lys/Arg decarboxylase, major domain M001_005415 IPR011193 Ornithine/lysine/arginine decarboxylase M001_005415 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal M001_005420 IPR023685 Pyridoxal kinase PdxY M001_005420 IPR004625 Pyridoxine kinase M001_005420 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase M001_005420 IPR029056 Ribokinase-like M001_005430 IPR042089 Peptidase M13, domain 2 M001_005430 IPR018497 Peptidase M13, C-terminal domain M001_005430 IPR000718 Peptidase M13 M001_005430 IPR008753 Peptidase M13, N-terminal domain M001_005430 IPR024079 Metallopeptidase, catalytic domain superfamily M001_005435 IPR012094 tRNA(Ile)-lysidine synthase M001_005435 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_005435 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal M001_005435 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal M001_005435 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal M001_005435 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain M001_005440 IPR029787 Nucleotide cyclase M001_005440 IPR000160 GGDEF domain M001_005440 IPR029016 GAF-like domain superfamily M001_005445 IPR006037 Regulator of K+ conductance, C-terminal M001_005445 IPR006153 Cation/H+ exchanger M001_005445 IPR038770 Sodium/solute symporter superfamily M001_005445 IPR003148 Regulator of K+ conductance, N-terminal M001_005445 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M001_005445 IPR036291 NAD(P)-binding domain superfamily M001_005465 IPR011006 CheY-like superfamily M001_005465 IPR001789 Signal transduction response regulator, receiver domain M001_005465 IPR016032 Signal transduction response regulator, C-terminal effector M001_005465 IPR000792 Transcription regulator LuxR, C-terminal M001_005475 IPR017853 Glycoside hydrolase superfamily M001_005475 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_005475 IPR014635 Alpha-amylase, MalS type M001_005490 IPR001173 Glycosyltransferase 2-like M001_005490 IPR029044 Nucleotide-diphospho-sugar transferases M001_005505 IPR005490 L,D-transpeptidase catalytic domain M001_005505 IPR002477 Peptidoglycan binding-like M001_005505 IPR036365 PGBD-like superfamily M001_005505 IPR038063 L,D-transpeptidase catalytic domain-like M001_005510 IPR006311 Twin-arginine translocation pathway, signal sequence M001_005510 IPR010275 Protein of unknown function DUF882 M001_005510 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily M001_005520 IPR005115 Uncharacterised domain UPF0126 M001_005525 IPR022985 Sulfate transporter CysZ M001_005530 IPR024704 Structural maintenance of chromosomes protein M001_005530 IPR003395 RecF/RecN/SMC, N-terminal M001_005530 IPR010935 SMCs flexible hinge M001_005530 IPR036277 SMCs flexible hinge superfamily M001_005530 IPR011890 Structural maintenance of chromosomes protein, prokaryotic M001_005530 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_005535 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily M001_005535 IPR007449 ZipA, C-terminal FtsZ-binding domain M001_005535 IPR011919 Cell division protein ZipA M001_005540 IPR001357 BRCT domain M001_005540 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type M001_005540 IPR033136 NAD-dependent DNA ligase, conserved site M001_005540 IPR018239 NAD-dependent DNA ligase, active site M001_005540 IPR010994 RuvA domain 2-like M001_005540 IPR012340 Nucleic acid-binding, OB-fold M001_005540 IPR004150 NAD-dependent DNA ligase, OB-fold M001_005540 IPR013840 NAD-dependent DNA ligase, N-terminal M001_005540 IPR013839 NAD-dependent DNA ligase, adenylation M001_005540 IPR041663 DisA/LigA, helix-hairpin-helix motif M001_005540 IPR001679 NAD-dependent DNA ligase M001_005540 IPR036420 BRCT domain superfamily M001_005540 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 M001_005555 IPR005144 ATP-cone domain M001_005555 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic M001_005555 IPR001150 Glycine radical domain M001_005555 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M001_005560 IPR007197 Radical SAM M001_005560 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic M001_005560 IPR034457 Organic radical-activating enzymes M001_005560 IPR001989 Radical-activating enzyme, conserved site M001_005560 IPR013785 Aldolase-type TIM barrel M001_005565 IPR000612 Proteolipid membrane potential modulator M001_005590 IPR030196 Multidrug resistance protein MdtN M001_005590 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_005590 IPR005694 Efflux pump membrane protein M001_005595 IPR023071 Transcriptional regulator, SlyA M001_005595 IPR023187 Transcriptional regulator MarR-type, conserved site M001_005595 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005595 IPR036390 Winged helix DNA-binding domain superfamily M001_005595 IPR000835 MarR-type HTH domain M001_005605 IPR004679 2-hydroxycarboxylate transporter M001_005605 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes M001_005610 IPR012302 Malic enzyme, NAD-binding M001_005610 IPR001891 Malic oxidoreductase M001_005610 IPR023667 NAD-dependent malic enzyme, proteobacteria M001_005610 IPR012301 Malic enzyme, N-terminal domain M001_005610 IPR037062 Malic enzyme, N-terminal domain superfamily M001_005610 IPR036291 NAD(P)-binding domain superfamily M001_005610 IPR015884 Malic enzyme, conserved site M001_005615 IPR000014 PAS domain M001_005615 IPR039506 SpoOB, alpha-helical domain M001_005615 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB M001_005615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_005615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_005615 IPR003594 Histidine kinase/HSP90-like ATPase M001_005615 IPR029151 Periplasmic sensor-like domain superfamily M001_005615 IPR035965 PAS domain superfamily M001_005615 IPR013767 PAS fold M001_005615 IPR033463 Single cache domain 3 M001_005615 IPR005467 Histidine kinase domain M001_005620 IPR028141 Transcriptional regulator M001_005620 IPR024187 Signal transduction response regulator, citrate/malate metabolism M001_005620 IPR011006 CheY-like superfamily M001_005620 IPR001789 Signal transduction response regulator, receiver domain M001_005625 IPR000620 EamA domain M001_005635 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M001_005635 IPR015590 Aldehyde dehydrogenase domain M001_005635 IPR016160 Aldehyde dehydrogenase, cysteine active site M001_005635 IPR016161 Aldehyde/histidinol dehydrogenase M001_005635 IPR016162 Aldehyde dehydrogenase, N-terminal M001_005635 IPR016163 Aldehyde dehydrogenase, C-terminal M001_005640 IPR025944 Sigma-54 interaction domain, conserved site M001_005640 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_005640 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_005640 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_005640 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_005640 IPR002197 DNA binding HTH domain, Fis-type M001_005640 IPR009057 Homeobox-like domain superfamily M001_005640 IPR029016 GAF-like domain superfamily M001_005640 IPR003018 GAF domain M001_005640 IPR003593 AAA+ ATPase domain M001_005645 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M001_005645 IPR037523 Vicinal oxygen chelate (VOC) domain M001_005645 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M001_005650 IPR001789 Signal transduction response regulator, receiver domain M001_005650 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB M001_005650 IPR001867 OmpR/PhoB-type DNA-binding domain M001_005650 IPR011006 CheY-like superfamily M001_005650 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005650 IPR039420 Transcriptional regulatory protein WalR-like M001_005655 IPR005467 Histidine kinase domain M001_005655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_005655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_005655 IPR000014 PAS domain M001_005655 IPR035965 PAS domain superfamily M001_005655 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR M001_005655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_005655 IPR013767 PAS fold M001_005655 IPR021766 Phosphate regulon sensor protein PhoR M001_005655 IPR003594 Histidine kinase/HSP90-like ATPase M001_005655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_005660 IPR024370 PBP domain M001_005660 IPR011862 Phosphate binding protein M001_005665 IPR001915 Peptidase M48 M001_005665 IPR030873 Beta-barrel assembly-enhancing protease M001_005665 IPR011990 Tetratricopeptide-like helical domain superfamily M001_005675 IPR023505 N-acetyl-D-glucosamine kinase M001_005675 IPR000600 ROK family M001_005680 IPR036822 Copper homeostasis (CutC) domain superfamily M001_005680 IPR023648 Copper homeostasis CutC domain M001_005680 IPR005627 Copper homeostasis protein CutC M001_005685 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily M001_005685 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal M001_005685 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M001_005700 IPR015797 NUDIX hydrolase-like domain superfamily M001_005700 IPR000086 NUDIX hydrolase domain M001_005700 IPR024195 NUDIX hydrolase, YfcD, predicted M001_005710 IPR013766 Thioredoxin domain M001_005710 IPR036249 Thioredoxin-like superfamily M001_005710 IPR013740 Redoxin M001_005710 IPR037944 Peroxiredoxin-5-like M001_005715 IPR004837 Sodium/calcium exchanger membrane region M001_005715 IPR004481 Sodium/potassium/calcium exchanger M001_005720 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M001_005720 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site M001_005720 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal M001_005720 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal M001_005720 IPR002986 Diaminopimelate decarboxylase, LysA M001_005720 IPR029066 PLP-binding barrel M001_005720 IPR000183 Ornithine/DAP/Arg decarboxylase M001_005725 IPR001463 Sodium:alanine symporter M001_005730 IPR041677 DNA2/NAM7 helicase, AAA domain M001_005730 IPR041679 DNA2/NAM7 helicase-like, AAA domain M001_005730 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_005730 IPR025103 Protein of unknown function DUF4011 M001_005730 IPR041677 DNA2/NAM7 helicase, AAA domain M001_005730 IPR025103 Protein of unknown function DUF4011 M001_005730 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_005730 IPR041679 DNA2/NAM7 helicase-like, AAA domain M001_005735 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M001_005735 IPR024897 Octanoyltransferase LipL M001_005740 IPR006042 Xanthine/uracil permease M001_005740 IPR006043 Xanthine/uracil/vitamin C permease M001_005745 IPR029787 Nucleotide cyclase M001_005745 IPR000160 GGDEF domain M001_005750 IPR038191 YciN superfamily M001_005750 IPR019633 Protein of unknown function DUF2498 M001_005755 IPR002528 Multi antimicrobial extrusion protein M001_005760 IPR029062 Class I glutamine amidotransferase-like M001_005760 IPR018062 HTH domain AraC-type, conserved site M001_005760 IPR018060 DNA binding HTH domain, AraC-type M001_005760 IPR009057 Homeobox-like domain superfamily M001_005760 IPR020449 Transcription regulator HTH, AraC- type M001_005765 IPR037062 Malic enzyme, N-terminal domain superfamily M001_005765 IPR012302 Malic enzyme, NAD-binding M001_005765 IPR015884 Malic enzyme, conserved site M001_005765 IPR001891 Malic oxidoreductase M001_005765 IPR023667 NAD-dependent malic enzyme, proteobacteria M001_005765 IPR036291 NAD(P)-binding domain superfamily M001_005765 IPR012301 Malic enzyme, N-terminal domain M001_005770 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M001_005770 IPR006665 OmpA-like domain M001_005770 IPR006664 Outer membrane protein, bacterial M001_005770 IPR000498 Outer membrane protein OmpA-like, transmembrane domain M001_005770 IPR002368 Outer membrane protein, OmpA M001_005770 IPR036737 OmpA-like domain superfamily M001_005770 IPR006690 Outer membrane protein, OmpA-like, conserved site M001_005775 IPR036737 OmpA-like domain superfamily M001_005775 IPR002368 Outer membrane protein, OmpA M001_005775 IPR006690 Outer membrane protein, OmpA-like, conserved site M001_005775 IPR006665 OmpA-like domain M001_005775 IPR006664 Outer membrane protein, bacterial M001_005775 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M001_005775 IPR000498 Outer membrane protein OmpA-like, transmembrane domain M001_005790 IPR002293 Amino acid/polyamine transporter I M001_005795 IPR001423 Lysophospholipase patatin, conserved site M001_005795 IPR002641 Patatin-like phospholipase domain M001_005795 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M001_005800 IPR000160 GGDEF domain M001_005800 IPR029787 Nucleotide cyclase M001_005800 IPR033424 Membrane-associated sensor domain M001_005805 IPR005694 Efflux pump membrane protein M001_005805 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_005805 IPR030196 Multidrug resistance protein MdtN M001_005810 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_005810 IPR001036 Acriflavin resistance protein M001_005810 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 M001_005815 IPR022946 Uncharacterised protein family UPF0313 M001_005815 IPR024560 Uncharacterised protein family UPF0313, C-terminal M001_005815 IPR013704 Uncharacterised protein family UPF0313, N-terminal M001_005815 IPR020612 Methylthiotransferase, conserved site M001_005815 IPR023404 Radical SAM, alpha/beta horseshoe M001_005815 IPR007197 Radical SAM M001_005815 IPR006638 Elp3/MiaB/NifB M001_005845 IPR012189 Peptidase M28E, aminopeptidase AP1 M001_005845 IPR007280 Peptidase, C-terminal, archaeal/bacterial M001_005845 IPR007484 Peptidase M28 M001_005860 IPR000847 Transcription regulator HTH, LysR M001_005860 IPR036390 Winged helix DNA-binding domain superfamily M001_005860 IPR005119 LysR, substrate-binding M001_005860 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005860 IPR037416 Nodulation protein D, PBP2 M001_005865 IPR036291 NAD(P)-binding domain superfamily M001_005865 IPR000683 Oxidoreductase, N-terminal M001_005870 IPR025526 DsrC-like domain superfamily M001_005870 IPR007453 Sulphur transfer protein DsrC/TusE M001_005870 IPR042072 DsrC-like protein, C-terminal domain M001_005875 IPR010020 Integral membrane protein, YccS/YhfK M001_005875 IPR010019 Integral membrane protein, YccS M001_005875 IPR032692 Integral membrane protein YccS, N-terminal M001_005880 IPR006214 Bax inhibitor 1-related M001_005880 IPR006213 Bax inhibitor 1, conserved site M001_005890 IPR036390 Winged helix DNA-binding domain superfamily M001_005890 IPR036388 Winged helix-like DNA-binding domain superfamily M001_005890 IPR037171 NagB/RpiA transferase-like M001_005890 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M001_005890 IPR001034 DeoR-type HTH domain M001_005890 IPR014036 DeoR C-terminal sensor domain M001_005890 IPR023711 Transcription regulator HTH, UlaR M001_005895 IPR013022 Xylose isomerase-like, TIM barrel domain M001_005895 IPR036237 Xylose isomerase-like superfamily M001_005895 IPR004560 L-ribulose-5-phosphate 3-epimerase M001_005895 IPR001719 AP endonuclease 2 M001_005900 IPR023214 HAD superfamily M001_005900 IPR006379 HAD-superfamily hydrolase, subfamily IIB M001_005900 IPR000150 Cof family M001_005900 IPR036412 HAD-like superfamily M001_005905 IPR023951 L-ascorbate-6-phosphate lactonase UlaG M001_005905 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M001_005910 IPR004703 Phosphotransferase system, sugar-specific permease component M001_005915 IPR002178 PTS EIIA type-2 domain M001_005915 IPR016152 Phosphotransferase/anion transporter M001_005920 IPR036409 Class II aldolase/adducin N-terminal domain superfamily M001_005920 IPR001303 Class II aldolase/adducin N-terminal M001_005920 IPR004661 L-ribulose-5-phosphate 4-epimerase M001_005925 IPR011060 Ribulose-phosphate binding barrel M001_005925 IPR001754 Orotidine 5'-phosphate decarboxylase domain M001_005925 IPR013785 Aldolase-type TIM barrel M001_005925 IPR041710 HPS/KGPDC domain M001_005930 IPR022792 Type II secretion system, protein N M001_005930 IPR000645 Type II secretion system protein N, conserved site M001_005935 IPR007690 Type II secretion system, protein M M001_005935 IPR023229 Type II secretion system protein M, periplasmic domain superfamily M001_005940 IPR024230 GspL, cytoplasmic actin-ATPase-like domain M001_005940 IPR025691 GspL periplasmic domain M001_005940 IPR007812 Type II secretion system protein L M001_005945 IPR038072 GspK, central domain superfamily M001_005945 IPR005628 General secretion pathway protein K M001_005950 IPR012902 Prokaryotic N-terminal methylation site M001_005950 IPR010055 Type II secretion system protein J M001_005955 IPR003413 Type II secretion system protein I domain M001_005955 IPR012902 Prokaryotic N-terminal methylation site M001_005955 IPR010052 Type II secretion system protein I M001_005960 IPR002416 Type II secretion system protein H M001_005960 IPR022346 General secretion pathway, GspH M001_005960 IPR012902 Prokaryotic N-terminal methylation site M001_005965 IPR010054 General secretion pathway protein G M001_005965 IPR012902 Prokaryotic N-terminal methylation site M001_005965 IPR013545 Type II secretion system protein G M001_005965 IPR000983 Bacterial general secretion pathway protein G-type pilin M001_005970 IPR042094 Type II secretion system F domain superfamily M001_005970 IPR011850 General secretion pathway protein F M001_005970 IPR003004 GspF/PilC family M001_005970 IPR018076 Type II secretion system F domain M001_005970 IPR001992 Type II secretion system conserved site M001_005975 IPR042181 Type II secretion system, protein E, N-terminal M001_005975 IPR037257 General secretory system II, protein E, N-terminal superfamily M001_005975 IPR013369 Type II secretion system GspE M001_005975 IPR001482 Type II/IV secretion system protein M001_005975 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_005975 IPR003593 AAA+ ATPase domain M001_005980 IPR013356 Type II secretion system GspD M001_005980 IPR004846 Type II/III secretion system M001_005980 IPR038591 NolW-like superfamily M001_005980 IPR005644 NolW-like M001_005980 IPR001775 GspD/PilQ family M001_005980 IPR004845 Type II secretion system GspD, conserved site M001_005985 IPR024961 Type II secretion system protein C, N-terminal M001_005985 IPR001639 Type II secretion system protein C M001_005985 IPR036034 PDZ superfamily M001_005990 IPR032389 Type II secretion system protein B M001_005995 IPR002477 Peptidoglycan binding-like M001_005995 IPR036366 PGBD superfamily M001_005995 IPR036365 PGBD-like superfamily M001_005995 IPR003593 AAA+ ATPase domain M001_005995 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006000 IPR003607 HD/PDEase domain M001_006000 IPR037522 HD-GYP domain M001_006000 IPR003660 HAMP domain M001_006000 IPR006674 HD domain M001_006005 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal M001_006005 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M001_006005 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 M001_006005 IPR016039 Thiolase-like M001_006015 IPR041569 AAA ATPase, AAA+ lid domain M001_006015 IPR000642 Peptidase M41 M001_006015 IPR003593 AAA+ ATPase domain M001_006015 IPR037219 Peptidase M41-like M001_006015 IPR005936 Peptidase, FtsH M001_006015 IPR003960 ATPase, AAA-type, conserved site M001_006015 IPR003959 ATPase, AAA-type, core M001_006015 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006020 IPR001926 Pyridoxal-phosphate dependent enzyme M001_006020 IPR005856 Cysteine synthase M001_006020 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site M001_006020 IPR005859 Cysteine synthase CysK M001_006020 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M001_006025 IPR035895 HPr-like superfamily M001_006025 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M001_006025 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M001_006025 IPR000032 Phosphocarrier protein HPr-like M001_006030 IPR006318 Phosphotransferase system, enzyme I-like M001_006030 IPR008731 Phosphotransferase system, enzyme I N-terminal M001_006030 IPR024692 Phosphotransferase system, enzyme I M001_006030 IPR008279 PEP-utilising enzyme, mobile domain M001_006030 IPR036618 PtsI, HPr-binding domain superfamily M001_006030 IPR018274 PEP-utilising enzyme, active site M001_006030 IPR000121 PEP-utilising enzyme, C-terminal M001_006030 IPR023151 PEP-utilising enzyme, conserved site M001_006030 IPR040442 Pyruvate kinase-like domain superfamily M001_006030 IPR036637 Phosphohistidine domain superfamily M001_006030 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_006035 IPR011055 Duplicated hybrid motif M001_006035 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M001_006040 IPR002559 Transposase, IS4-like M001_006040 IPR024473 Transposase, IS4, N-terminal M001_006040 IPR012337 Ribonuclease H-like superfamily M001_006045 IPR000160 GGDEF domain M001_006045 IPR029787 Nucleotide cyclase M001_006045 IPR000014 PAS domain M001_006045 IPR035965 PAS domain superfamily M001_006045 IPR000700 PAS-associated, C-terminal M001_006045 IPR013656 PAS fold-4 M001_006050 IPR024079 Metallopeptidase, catalytic domain superfamily M001_006050 IPR018497 Peptidase M13, C-terminal domain M001_006050 IPR008753 Peptidase M13, N-terminal domain M001_006050 IPR042089 Peptidase M13, domain 2 M001_006050 IPR000718 Peptidase M13 M001_006060 IPR010920 LSM domain superfamily M001_006060 IPR006686 Mechanosensitive ion channel MscS, conserved site M001_006060 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 M001_006060 IPR023298 P-type ATPase, transmembrane domain superfamily M001_006060 IPR023408 Mechanosensitive ion channel MscS domain superfamily M001_006060 IPR025692 Mechanosensitive ion channel inner membrane domain 1 M001_006060 IPR024393 Mechanosensitive ion channel MscS, porin domain M001_006060 IPR006685 Mechanosensitive ion channel MscS M001_006060 IPR011066 Mechanosensitive ion channel MscS, C-terminal M001_006065 IPR015795 Pyruvate kinase, C-terminal M001_006065 IPR001697 Pyruvate kinase M001_006065 IPR040442 Pyruvate kinase-like domain superfamily M001_006065 IPR015806 Pyruvate kinase, insert domain superfamily M001_006065 IPR036918 Pyruvate kinase, C-terminal domain superfamily M001_006065 IPR011037 Pyruvate kinase-like, insert domain superfamily M001_006065 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_006065 IPR018209 Pyruvate kinase, active site M001_006065 IPR015793 Pyruvate kinase, barrel M001_006075 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B M001_006075 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type M001_006080 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006080 IPR038729 Rad50/SbcC-type AAA domain M001_006085 IPR004593 Nuclease SbcCD subunit D M001_006085 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M001_006085 IPR026843 Nuclease SbcCD subunit D, C-terminal domain M001_006085 IPR029052 Metallo-dependent phosphatase-like M001_006085 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain M001_006095 IPR007476 Putative exonuclease, RdgC M001_006100 IPR029055 Nucleophile aminohydrolases, N-terminal M001_006100 IPR000101 Gamma-glutamyltranspeptidase M001_006105 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal M001_006105 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M001_006105 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily M001_006110 IPR003841 Sodium-dependent phosphate transport protein M001_006110 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein M001_006115 IPR004841 Amino acid permease/ SLC12A domain M001_006125 IPR004841 Amino acid permease/ SLC12A domain M001_006130 IPR005814 Aminotransferase class-III M001_006130 IPR004632 4-aminobutyrate aminotransferase, bacterial M001_006130 IPR015424 Pyridoxal phosphate-dependent transferase M001_006130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_006130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_006135 IPR015590 Aldehyde dehydrogenase domain M001_006135 IPR016162 Aldehyde dehydrogenase, N-terminal M001_006135 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M001_006135 IPR016160 Aldehyde dehydrogenase, cysteine active site M001_006135 IPR016163 Aldehyde dehydrogenase, C-terminal M001_006135 IPR010102 Succinate semialdehyde dehydrogenase M001_006135 IPR016161 Aldehyde/histidinol dehydrogenase M001_006140 IPR011051 RmlC-like cupin domain superfamily M001_006140 IPR014710 RmlC-like jelly roll fold M001_006140 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_006140 IPR001387 Cro/C1-type helix-turn-helix domain M001_006140 IPR013096 Cupin 2, conserved barrel M001_006145 IPR036188 FAD/NAD(P)-binding domain superfamily M001_006145 IPR006076 FAD dependent oxidoreductase M001_006160 IPR020761 Uncharacterised protein family UPF0114, bacteria M001_006160 IPR005134 Uncharacterised protein family UPF0114 M001_006165 IPR003660 HAMP domain M001_006165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_006165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_006165 IPR015014 PhoQ Sensor M001_006165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_006165 IPR038429 PhoQ Sensor superfamily M001_006165 IPR005467 Histidine kinase domain M001_006165 IPR003594 Histidine kinase/HSP90-like ATPase M001_006170 IPR001867 OmpR/PhoB-type DNA-binding domain M001_006170 IPR011006 CheY-like superfamily M001_006170 IPR001789 Signal transduction response regulator, receiver domain M001_006170 IPR039420 Transcriptional regulatory protein WalR-like M001_006170 IPR036388 Winged helix-like DNA-binding domain superfamily M001_006180 IPR016174 Di-haem cytochrome, transmembrane M001_006180 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase M001_006185 IPR023370 TrmO-like, N-terminal domain M001_006185 IPR040372 YaeB-like M001_006185 IPR023368 Uncharacterised protein family UPF0066, conserved site M001_006185 IPR041369 TrmO, C-terminal M001_006185 IPR036414 YaeB, N-terminal domain superfamily M001_006185 IPR036413 YaeB-like superfamily M001_006205 IPR036640 ABC transporter type 1, transmembrane domain superfamily M001_006205 IPR003439 ABC transporter-like M001_006205 IPR003593 AAA+ ATPase domain M001_006205 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC M001_006205 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006205 IPR011527 ABC transporter type 1, transmembrane domain M001_006205 IPR017871 ABC transporter, conserved site M001_006210 IPR003439 ABC transporter-like M001_006210 IPR039421 Type I protein exporter M001_006210 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD M001_006210 IPR017871 ABC transporter, conserved site M001_006210 IPR036640 ABC transporter type 1, transmembrane domain superfamily M001_006210 IPR011527 ABC transporter type 1, transmembrane domain M001_006210 IPR003593 AAA+ ATPase domain M001_006210 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006225 IPR036388 Winged helix-like DNA-binding domain superfamily M001_006225 IPR039420 Transcriptional regulatory protein WalR-like M001_006225 IPR001789 Signal transduction response regulator, receiver domain M001_006225 IPR011006 CheY-like superfamily M001_006225 IPR016032 Signal transduction response regulator, C-terminal effector M001_006225 IPR001867 OmpR/PhoB-type DNA-binding domain M001_006235 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M001_006235 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M001_006235 IPR010203 Regulator of ribonuclease activity A M001_006255 IPR036249 Thioredoxin-like superfamily M001_006255 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD M001_006260 IPR027541 Arsenical pump-driving ATPase M001_006260 IPR025723 Anion-transporting ATPase-like domain M001_006260 IPR003593 AAA+ ATPase domain M001_006260 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006260 IPR016300 Arsenical pump ATPase, ArsA/GET3 M001_006265 IPR038770 Sodium/solute symporter superfamily M001_006265 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 M001_006265 IPR004706 Arsenical-resistance protein Acr3 M001_006270 IPR036249 Thioredoxin-like superfamily M001_006270 IPR006660 Arsenate reductase-like M001_006270 IPR006659 Arsenate reductase M001_006275 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial M001_006275 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M001_006275 IPR002668 Concentrative nucleoside transporter N-terminal domain M001_006275 IPR011657 Concentrative nucleoside transporter C-terminal domain M001_006275 IPR008276 Concentrative nucleoside transporter M001_006295 IPR007404 LexA-binding, inner membrane-associated putative hydrolase M001_006315 IPR002028 Tryptophan synthase, alpha chain M001_006315 IPR011060 Ribulose-phosphate binding barrel M001_006315 IPR013785 Aldolase-type TIM barrel M001_006315 IPR018204 Tryptophan synthase, alpha chain, active site M001_006320 IPR001926 Pyridoxal-phosphate dependent enzyme M001_006320 IPR023026 Tryptophan synthase beta chain/beta chain-like M001_006320 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M001_006320 IPR006654 Tryptophan synthase, beta chain M001_006320 IPR006653 Tryptophan synthase, beta chain, conserved site M001_006325 IPR013785 Aldolase-type TIM barrel M001_006325 IPR001468 Indole-3-glycerol phosphate synthase, conserved site M001_006325 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) M001_006325 IPR011060 Ribulose-phosphate binding barrel M001_006325 IPR013798 Indole-3-glycerol phosphate synthase M001_006330 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily M001_006330 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily M001_006330 IPR005940 Anthranilate phosphoribosyl transferase M001_006330 IPR017459 Glycosyl transferase family 3, N-terminal domain M001_006330 IPR000312 Glycosyl transferase, family 3 M001_006335 IPR005940 Anthranilate phosphoribosyl transferase M001_006335 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily M001_006335 IPR017926 Glutamine amidotransferase M001_006335 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily M001_006335 IPR000312 Glycosyl transferase, family 3 M001_006335 IPR017459 Glycosyl transferase family 3, N-terminal domain M001_006335 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain M001_006335 IPR029062 Class I glutamine amidotransferase-like M001_006340 IPR006805 Anthranilate synthase component I, N-terminal M001_006340 IPR019999 Anthranilate synthase component I-like M001_006340 IPR005801 ADC synthase M001_006340 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial M001_006340 IPR015890 Chorismate-utilising enzyme, C-terminal M001_006345 IPR003141 Polymerase/histidinol phosphatase, N-terminal M001_006345 IPR016195 Polymerase/histidinol phosphatase-like M001_006345 IPR004013 PHP domain M001_006350 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M001_006350 IPR006070 YrdC-like domain M001_006355 IPR003768 Segregation and condensation protein A M001_006360 IPR005234 Chromosome segregation/condensation protein ScpB M001_006360 IPR036388 Winged helix-like DNA-binding domain superfamily M001_006360 IPR036390 Winged helix DNA-binding domain superfamily M001_006365 IPR006145 Pseudouridine synthase, RsuA/RluA M001_006365 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M001_006365 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M001_006365 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_006365 IPR036986 RNA-binding S4 domain superfamily M001_006365 IPR002942 RNA-binding S4 domain M001_006370 IPR003703 Acyl-CoA thioesterase M001_006370 IPR029069 HotDog domain superfamily M001_006375 IPR010452 Isocitrate dehydrogenase kinasephosphatase M001_006380 IPR001537 tRNA/rRNA methyltransferase, SpoU type M001_006380 IPR004384 RNA methyltransferase TrmJ/LasT M001_006380 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M001_006380 IPR029028 Alpha/beta knot methyltransferases M001_006385 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I M001_006385 IPR019811 Homoserine dehydrogenase, conserved site M001_006385 IPR002912 ACT domain M001_006385 IPR036393 Acetylglutamate kinase-like superfamily M001_006385 IPR001342 Homoserine dehydrogenase, catalytic M001_006385 IPR018042 Aspartate kinase, conserved site M001_006385 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain M001_006385 IPR001048 Aspartate/glutamate/uridylate kinase M001_006385 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding M001_006385 IPR001341 Aspartate kinase M001_006385 IPR036291 NAD(P)-binding domain superfamily M001_006385 IPR027795 CASTOR, ACT domain M001_006390 IPR036554 GHMP kinase, C-terminal domain superfamily M001_006390 IPR013750 GHMP kinase, C-terminal domain M001_006390 IPR006203 GHMP kinase, ATP-binding, conserved site M001_006390 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_006390 IPR006204 GHMP kinase N-terminal domain M001_006390 IPR000870 Homoserine kinase M001_006390 IPR020568 Ribosomal protein S5 domain 2-type fold M001_006395 IPR037158 Threonine synthase, N-terminal domain superfamily M001_006395 IPR004450 Threonine synthase-like M001_006395 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M001_006395 IPR001926 Pyridoxal-phosphate dependent enzyme M001_006395 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site M001_006395 IPR029144 Threonine synthase, N-terminal M001_006420 IPR007197 Radical SAM M001_006420 IPR005839 Methylthiotransferase M001_006420 IPR013848 Methylthiotransferase, N-terminal M001_006420 IPR005840 Ribosomal protein S12 methylthiotransferase RimO M001_006420 IPR038135 Methylthiotransferase, N-terminal domain superfamily M001_006420 IPR002792 TRAM domain M001_006420 IPR020612 Methylthiotransferase, conserved site M001_006420 IPR023404 Radical SAM, alpha/beta horseshoe M001_006420 IPR006638 Elp3/MiaB/NifB M001_006420 IPR041582 RimO, TRAM domain M001_006425 IPR011006 CheY-like superfamily M001_006425 IPR003607 HD/PDEase domain M001_006425 IPR037522 HD-GYP domain M001_006425 IPR001789 Signal transduction response regulator, receiver domain M001_006440 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_006440 IPR036388 Winged helix-like DNA-binding domain superfamily M001_006440 IPR002852 Uncharacterised protein family UPF0251 M001_006455 IPR009057 Homeobox-like domain superfamily M001_006455 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M001_006455 IPR001647 DNA-binding HTH domain, TetR-type M001_006455 IPR013572 Transcription regulator MAATS, C-terminal M001_006455 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M001_006460 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_006460 IPR006143 RND efflux pump, membrane fusion protein M001_006465 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_006465 IPR001036 Acriflavin resistance protein M001_006465 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 M001_006470 IPR005888 dTDP-glucose 4,6-dehydratase M001_006470 IPR016040 NAD(P)-binding domain M001_006470 IPR036291 NAD(P)-binding domain superfamily M001_006475 IPR005913 dTDP-4-dehydrorhamnose reductase family M001_006475 IPR036291 NAD(P)-binding domain superfamily M001_006475 IPR029903 RmlD-like substrate binding domain M001_006480 IPR029044 Nucleotide-diphospho-sugar transferases M001_006480 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form M001_006480 IPR005835 Nucleotidyl transferase domain M001_006485 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related M001_006485 IPR014710 RmlC-like jelly roll fold M001_006485 IPR011051 RmlC-like cupin domain superfamily M001_006490 IPR013369 Type II secretion system GspE M001_006490 IPR001482 Type II/IV secretion system protein M001_006490 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006490 IPR003593 AAA+ ATPase domain M001_006490 IPR037257 General secretory system II, protein E, N-terminal superfamily M001_006495 IPR042094 Type II secretion system F domain superfamily M001_006495 IPR001992 Type II secretion system conserved site M001_006495 IPR018076 Type II secretion system F domain M001_006495 IPR003004 GspF/PilC family M001_006500 IPR010054 General secretion pathway protein G M001_006500 IPR013545 Type II secretion system protein G M001_006500 IPR012902 Prokaryotic N-terminal methylation site M001_006500 IPR000983 Bacterial general secretion pathway protein G-type pilin M001_006505 IPR012902 Prokaryotic N-terminal methylation site M001_006505 IPR000983 Bacterial general secretion pathway protein G-type pilin M001_006505 IPR013545 Type II secretion system protein G M001_006505 IPR010054 General secretion pathway protein G M001_006540 IPR005644 NolW-like M001_006540 IPR001775 GspD/PilQ family M001_006540 IPR004845 Type II secretion system GspD, conserved site M001_006540 IPR004846 Type II/III secretion system M001_006540 IPR013356 Type II secretion system GspD M001_006540 IPR038591 NolW-like superfamily M001_006560 IPR003593 AAA+ ATPase domain M001_006560 IPR017871 ABC transporter, conserved site M001_006560 IPR003439 ABC transporter-like M001_006560 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006570 IPR002656 Acyltransferase 3 M001_006570 IPR036514 SGNH hydrolase superfamily M001_006580 IPR036291 NAD(P)-binding domain superfamily M001_006580 IPR001509 NAD-dependent epimerase/dehydratase M001_006585 IPR000715 Glycosyl transferase, family 4 M001_006585 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site M001_006590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_006590 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain M001_006590 IPR036291 NAD(P)-binding domain superfamily M001_006600 IPR001173 Glycosyltransferase 2-like M001_006600 IPR029044 Nucleotide-diphospho-sugar transferases M001_006605 IPR001296 Glycosyl transferase, family 1 M001_006605 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M001_006605 IPR011875 Alpha-maltose-1-phosphate synthase M001_006615 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase M001_006615 IPR003362 Bacterial sugar transferase M001_006625 IPR027454 Histone-like protein H-NS, N-terminal M001_006625 IPR001801 Histone-like protein H-NS M001_006625 IPR027444 Histone-like protein H-NS, C-terminal domain M001_006625 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily M001_006630 IPR003423 Outer membrane efflux protein M001_006630 IPR010131 RND efflux system, outer membrane lipoprotein, NodT M001_006635 IPR003593 AAA+ ATPase domain M001_006635 IPR003838 ABC transporter permease protein domain M001_006635 IPR003439 ABC transporter-like M001_006635 IPR017871 ABC transporter, conserved site M001_006635 IPR017911 ABC transporter, macrolide export, ATP-binding domain M001_006635 IPR025857 MacB-like periplasmic core domain M001_006635 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006640 IPR030190 Macrolide export protein MacA M001_006640 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_006640 IPR006143 RND efflux pump, membrane fusion protein M001_006645 IPR038222 DHHA2 domain superfamily M001_006645 IPR004097 DHHA2 domain M001_006645 IPR038763 DHH phosphoesterase superfamily M001_006645 IPR001667 DDH domain M001_006645 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable M001_006650 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006650 IPR004604 DNA recombination/repair protein RecN M001_006650 IPR003395 RecF/RecN/SMC, N-terminal M001_006655 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal M001_006655 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal M001_006655 IPR002504 NAD kinase M001_006655 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M001_006660 IPR000740 GrpE nucleotide exchange factor M001_006660 IPR013805 GrpE nucleotide exchange factor, coiled-coil M001_006660 IPR009012 GrpE nucleotide exchange factor, head M001_006665 IPR013126 Heat shock protein 70 family M001_006665 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily M001_006665 IPR018181 Heat shock protein 70, conserved site M001_006665 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily M001_006665 IPR012725 Chaperone DnaK M001_006670 IPR012724 Chaperone DnaJ M001_006670 IPR002939 Chaperone DnaJ, C-terminal M001_006670 IPR018253 DnaJ domain, conserved site M001_006670 IPR008971 HSP40/DnaJ peptide-binding M001_006670 IPR001305 Heat shock protein DnaJ, cysteine-rich domain M001_006670 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily M001_006670 IPR036869 Chaperone J-domain superfamily M001_006670 IPR001623 DnaJ domain M001_006675 IPR021570 LamB-type porin N-terminal domain M001_006675 IPR036998 Porin, LamB-type superfamily M001_006675 IPR003192 Porin, LamB-type M001_006680 IPR029056 Ribokinase-like M001_006680 IPR002139 Ribokinase/fructokinase M001_006680 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M001_006680 IPR011611 Carbohydrate kinase PfkB M001_006685 IPR003352 Phosphotransferase system, EIIC M001_006685 IPR013013 Phosphotransferase system, EIIC component, type 1 M001_006685 IPR001996 Phosphotransferase system, IIB component, type 1 M001_006685 IPR036878 Glucose permease domain IIB M001_006685 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M001_006685 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M001_006685 IPR010973 Phosphotransferase system, sucrose-specific IIBC component M001_006690 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily M001_006690 IPR013189 Glycosyl hydrolase family 32, C-terminal M001_006690 IPR001362 Glycoside hydrolase, family 32 M001_006690 IPR006232 Sucrose-6-phosphate hydrolase M001_006690 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily M001_006690 IPR013148 Glycosyl hydrolase family 32, N-terminal M001_006690 IPR018053 Glycoside hydrolase, family 32, active site M001_006695 IPR028082 Periplasmic binding protein-like I M001_006695 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_006695 IPR000843 LacI-type HTH domain M001_006695 IPR012781 D-fructose-responsive transcription factor M001_006695 IPR025997 Periplasmic binding protein M001_006700 IPR003416 MgtC/SapB/SrpB/YhiD family M001_006710 IPR023753 FAD/NAD(P)-binding domain M001_006710 IPR036188 FAD/NAD(P)-binding domain superfamily M001_006725 IPR007272 Sulphur transport domain M001_006740 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 M001_006740 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_006740 IPR001036 Acriflavin resistance protein M001_006745 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_006750 IPR003593 AAA+ ATPase domain M001_006750 IPR003439 ABC transporter-like M001_006750 IPR003838 ABC transporter permease protein domain M001_006750 IPR017871 ABC transporter, conserved site M001_006750 IPR017911 ABC transporter, macrolide export, ATP-binding domain M001_006750 IPR025857 MacB-like periplasmic core domain M001_006750 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006755 IPR017871 ABC transporter, conserved site M001_006755 IPR017911 ABC transporter, macrolide export, ATP-binding domain M001_006755 IPR025857 MacB-like periplasmic core domain M001_006755 IPR003838 ABC transporter permease protein domain M001_006755 IPR003593 AAA+ ATPase domain M001_006755 IPR003439 ABC transporter-like M001_006755 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006760 IPR003838 ABC transporter permease protein domain M001_006760 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006760 IPR025857 MacB-like periplasmic core domain M001_006760 IPR017911 ABC transporter, macrolide export, ATP-binding domain M001_006760 IPR017871 ABC transporter, conserved site M001_006760 IPR003439 ABC transporter-like M001_006760 IPR003593 AAA+ ATPase domain M001_006765 IPR035919 EAL domain superfamily M001_006765 IPR000160 GGDEF domain M001_006765 IPR029787 Nucleotide cyclase M001_006765 IPR001633 EAL domain M001_006765 IPR005330 MHYT domain M001_006770 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M001_006770 IPR019491 Lipoate protein ligase, C-terminal M001_006770 IPR004562 Lipoyltransferase/lipoate-protein ligase M001_006770 IPR023741 Lipoate-protein ligase A M001_006780 IPR016040 NAD(P)-binding domain M001_006780 IPR000534 Semialdehyde dehydrogenase, NAD-binding M001_006780 IPR036291 NAD(P)-binding domain superfamily M001_006785 IPR026592 Outer membrane protein assembly factor BamE M001_006785 IPR007450 Lipoprotein SmpA/OmlA M001_006785 IPR037873 BamE-like M001_006790 IPR039697 Iron-type alcohol dehydrogenase-like M001_006790 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M001_006790 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M001_006795 IPR035994 Nucleoside phosphorylase superfamily M001_006795 IPR018016 Nucleoside phosphorylase, conserved site M001_006795 IPR000845 Nucleoside phosphorylase domain M001_006795 IPR010058 Uridine phosphorylase M001_006800 IPR006145 Pseudouridine synthase, RsuA/RluA M001_006800 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M001_006800 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_006805 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA M001_006805 IPR023186 Inosine/uridine-preferring nucleoside hydrolase M001_006805 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain M001_006805 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site M001_006805 IPR036452 Ribonucleoside hydrolase-like M001_006820 IPR011088 Bacteriophage phiNM3, A0EWY4 M001_006825 IPR000727 Target SNARE coiled-coil homology domain M001_006825 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_006825 IPR004090 Chemotaxis methyl-accepting receptor M001_006825 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M001_006825 IPR003660 HAMP domain M001_006830 IPR001123 Amino acid exporter protein, LeuE-type M001_006845 IPR006037 Regulator of K+ conductance, C-terminal M001_006845 IPR023729 K(+)/H(+) antiporter NhaP2 M001_006845 IPR006153 Cation/H+ exchanger M001_006845 IPR030151 K(+)/H(+) antiporter NhaP M001_006845 IPR005170 Transporter-associated domain M001_006845 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M001_006845 IPR038770 Sodium/solute symporter superfamily M001_006845 IPR036318 FAD-binding, type PCMH-like superfamily M001_006845 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_006855 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily M001_006855 IPR003709 Peptidase M15B M001_006860 IPR011650 Peptidase M20, dimerisation domain M001_006860 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M001_006860 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria M001_006860 IPR036264 Bacterial exopeptidase dimerisation domain M001_006860 IPR002933 Peptidase M20 M001_006865 IPR006660 Arsenate reductase-like M001_006865 IPR006504 Transcriptional regulator Spx/MgsR M001_006865 IPR036249 Thioredoxin-like superfamily M001_006875 IPR004669 C4-dicarboxylate anaerobic carrier M001_006875 IPR018385 C4-dicarboxylate anaerobic carrier-like M001_006880 IPR033845 p-Aminobenzoyl-glutamate hydrolase subunit A M001_006880 IPR017439 Amidohydrolase M001_006880 IPR011650 Peptidase M20, dimerisation domain M001_006880 IPR002933 Peptidase M20 M001_006880 IPR036264 Bacterial exopeptidase dimerisation domain M001_006890 IPR004668 Anaerobic c4-dicarboxylate membrane transporter M001_006900 IPR012340 Nucleic acid-binding, OB-fold M001_006900 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M001_006900 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M001_006900 IPR004522 Asparagine-tRNA ligase M001_006900 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb M001_006900 IPR006195 Aminoacyl-tRNA synthetase, class II M001_006915 IPR015424 Pyridoxal phosphate-dependent transferase M001_006915 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA M001_006915 IPR005814 Aminotransferase class-III M001_006915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_006915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_006920 IPR013785 Aldolase-type TIM barrel M001_006920 IPR010722 Biotin and thiamin synthesis-associated domain M001_006920 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB M001_006920 IPR024177 Biotin synthase M001_006920 IPR006638 Elp3/MiaB/NifB M001_006920 IPR007197 Radical SAM M001_006925 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site M001_006925 IPR004839 Aminotransferase, class I/classII M001_006925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_006925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_006925 IPR015424 Pyridoxal phosphate-dependent transferase M001_006925 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria M001_006925 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type M001_006930 IPR029058 Alpha/Beta hydrolase fold M001_006930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_006930 IPR013216 Methyltransferase type 11 M001_006930 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC M001_006930 IPR000073 Alpha/beta hydrolase fold-1 M001_006935 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_006935 IPR004472 Dethiobiotin synthase BioD M001_006940 IPR022919 Peptidase M48, protease HtpX, putative M001_006940 IPR001915 Peptidase M48 M001_006945 IPR013655 PAS fold-3 M001_006945 IPR035965 PAS domain superfamily M001_006945 IPR000700 PAS-associated, C-terminal M001_006945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_006945 IPR001610 PAC motif M001_006945 IPR000014 PAS domain M001_006945 IPR004090 Chemotaxis methyl-accepting receptor M001_006950 IPR011037 Pyruvate kinase-like, insert domain superfamily M001_006950 IPR005303 MOSC, N-terminal beta barrel M001_006950 IPR005302 Molybdenum cofactor sulfurase, C-terminal M001_006950 IPR012675 Beta-grasp domain superfamily M001_006950 IPR005302 Molybdenum cofactor sulfurase, C-terminal M001_006950 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_006950 IPR036010 2Fe-2S ferredoxin-like superfamily M001_006950 IPR011037 Pyruvate kinase-like, insert domain superfamily M001_006950 IPR005303 MOSC, N-terminal beta barrel M001_006950 IPR036010 2Fe-2S ferredoxin-like superfamily M001_006950 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_006950 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site M001_006950 IPR012675 Beta-grasp domain superfamily M001_006950 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site M001_006960 IPR009051 Alpha-helical ferredoxin M001_006960 IPR028261 Dihydroprymidine dehydrogenase domain II M001_006960 IPR036188 FAD/NAD(P)-binding domain superfamily M001_006960 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain M001_006960 IPR023753 FAD/NAD(P)-binding domain M001_006960 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily M001_006965 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain M001_006965 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_006965 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M001_006965 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M001_006965 IPR029061 Thiamin diphosphate-binding fold M001_006965 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_006965 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain M001_006965 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II M001_006965 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily M001_006965 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain M001_006965 IPR011895 Pyruvate-flavodoxin oxidoreductase M001_006965 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal M001_006980 IPR036291 NAD(P)-binding domain superfamily M001_006980 IPR001509 NAD-dependent epimerase/dehydratase M001_006985 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase M001_006985 IPR029069 HotDog domain superfamily M001_006985 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain M001_006985 IPR006683 Thioesterase domain M001_006995 IPR005135 Endonuclease/exonuclease/phosphatase M001_006995 IPR022958 Uncharacterised protein family UPF0294 M001_006995 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M001_007000 IPR011902 Glutaredoxin, GrxA M001_007000 IPR002109 Glutaredoxin M001_007000 IPR014025 Glutaredoxin subgroup M001_007000 IPR036249 Thioredoxin-like superfamily M001_007005 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C M001_007005 IPR012338 Beta-lactamase/transpeptidase-like M001_007010 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007010 IPR001650 Helicase, C-terminal M001_007010 IPR011332 Zinc-binding ribosomal protein M001_007010 IPR006935 Helicase/UvrB, N-terminal M001_007010 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_007015 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_007020 IPR011223 Uncharacterised conserved protein UCP028770 M001_007025 IPR003706 CstA, N-terminal domain M001_007030 IPR001789 Signal transduction response regulator, receiver domain M001_007030 IPR007492 LytTR DNA-binding domain M001_007030 IPR011006 CheY-like superfamily M001_007035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_007035 IPR010559 Signal transduction histidine kinase, internal region M001_007035 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region M001_007035 IPR003018 GAF domain M001_007040 IPR029787 Nucleotide cyclase M001_007040 IPR003607 HD/PDEase domain M001_007040 IPR006674 HD domain M001_007040 IPR000160 GGDEF domain M001_007040 IPR037522 HD-GYP domain M001_007045 IPR012549 Phosphoethanolamine transferase, N-terminal M001_007045 IPR040423 Phosphoethanolamine transferase M001_007045 IPR000917 Sulfatase, N-terminal M001_007045 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_007050 IPR036390 Winged helix DNA-binding domain superfamily M001_007050 IPR036388 Winged helix-like DNA-binding domain superfamily M001_007050 IPR000600 ROK family M001_007050 IPR000835 MarR-type HTH domain M001_007055 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_007055 IPR006680 Amidohydrolase-related M001_007055 IPR032466 Metal-dependent hydrolase M001_007055 IPR003764 N-acetylglucosamine-6-phosphate deacetylase M001_007060 IPR037171 NagB/RpiA transferase-like M001_007060 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase M001_007060 IPR004547 Glucosamine-6-phosphate isomerase M001_007060 IPR018321 Glucosamine-6-phosphate isomerase, conserved site M001_007065 IPR003352 Phosphotransferase system, EIIC M001_007065 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component M001_007065 IPR036878 Glucose permease domain IIB M001_007065 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M001_007065 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M001_007065 IPR011055 Duplicated hybrid motif M001_007065 IPR013013 Phosphotransferase system, EIIC component, type 1 M001_007065 IPR001996 Phosphotransferase system, IIB component, type 1 M001_007070 IPR014756 Immunoglobulin E-set M001_007070 IPR013783 Immunoglobulin-like fold M001_007070 IPR012291 CBM2, carbohydrate-binding domain superfamily M001_007070 IPR015883 Glycoside hydrolase family 20, catalytic domain M001_007070 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M001_007070 IPR029018 Beta-hexosaminidase-like, domain 2 M001_007070 IPR017853 Glycoside hydrolase superfamily M001_007070 IPR025705 Beta-hexosaminidase M001_007070 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily M001_007070 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain M001_007070 IPR004867 Chitobiase C-terminal domain M001_007075 IPR000924 Glutamyl/glutaminyl-tRNA synthetase M001_007075 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily M001_007075 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal M001_007075 IPR004514 Glutamine-tRNA synthetase M001_007075 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain M001_007075 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_007075 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily M001_007075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_007075 IPR022861 Glutamine-tRNA ligase, bacterial M001_007075 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain M001_007080 IPR002481 Ferric-uptake regulator M001_007080 IPR036390 Winged helix DNA-binding domain superfamily M001_007080 IPR036388 Winged helix-like DNA-binding domain superfamily M001_007090 IPR008254 Flavodoxin/nitric oxide synthase M001_007090 IPR001226 Flavodoxin, conserved site M001_007090 IPR010086 Flavodoxin, long chain M001_007090 IPR029039 Flavoprotein-like superfamily M001_007095 IPR010985 Ribbon-helix-helix M001_007095 IPR002145 Ribbon-helix-helix protein, CopG M001_007105 IPR000073 Alpha/beta hydrolase fold-1 M001_007105 IPR029058 Alpha/Beta hydrolase fold M001_007110 IPR013321 Arc-type ribbon-helix-helix M001_007110 IPR010985 Ribbon-helix-helix M001_007110 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain M001_007110 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily M001_007110 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal M001_007110 IPR005621 Negative modulator of initiation of replication SeqA M001_007115 IPR005843 Alpha-D-phosphohexomutase, C-terminal M001_007115 IPR005852 Phosphoglucomutase, alpha-D-glucose specific M001_007115 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M001_007115 IPR016066 Alpha-D-phosphohexomutase, conserved site M001_007115 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M001_007115 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M001_007115 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M001_007115 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M001_007130 IPR031304 Transglycosylase SLT domain 2 M001_007130 IPR011757 Lytic transglycosylase MltB M001_007130 IPR023346 Lysozyme-like domain superfamily M001_007135 IPR000462 CDP-alcohol phosphatidyltransferase M001_007140 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007140 IPR003439 ABC transporter-like M001_007140 IPR003593 AAA+ ATPase domain M001_007140 IPR017871 ABC transporter, conserved site M001_007145 IPR035906 MetI-like superfamily M001_007145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_007150 IPR006059 Bacterial extracellular solute-binding protein M001_007150 IPR027020 Protein ynjB M001_007155 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M001_007155 IPR023753 FAD/NAD(P)-binding domain M001_007155 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_007155 IPR021179 Mercury(II) reductase M001_007155 IPR036163 Heavy metal-associated domain superfamily M001_007155 IPR006121 Heavy metal-associated domain, HMA M001_007155 IPR017969 Heavy-metal-associated, conserved site M001_007155 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M001_007155 IPR036188 FAD/NAD(P)-binding domain superfamily M001_007155 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site M001_007160 IPR003779 Carboxymuconolactone decarboxylase-like M001_007160 IPR029032 AhpD-like M001_007170 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site M001_007170 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type M001_007180 IPR035243 TamA, POTRA domain 1 M001_007180 IPR034746 POTRA domain M001_007180 IPR039910 Surface antigen D15-like M001_007180 IPR010827 POTRA domain, BamA/TamA-like M001_007180 IPR000184 Bacterial surface antigen (D15) M001_007185 IPR007452 Translocation and assembly module TamB M001_007205 IPR036567 Ribosome hibernation promotion factor-like M001_007205 IPR003489 Ribosome hibernation promoting factor/RaiA M001_007210 IPR029787 Nucleotide cyclase M001_007210 IPR005330 MHYT domain M001_007210 IPR000160 GGDEF domain M001_007210 IPR035919 EAL domain superfamily M001_007210 IPR001633 EAL domain M001_007215 IPR008258 Transglycosylase SLT domain 1 M001_007215 IPR008939 Lytic transglycosylase, superhelical U-shaped M001_007215 IPR023346 Lysozyme-like domain superfamily M001_007215 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily M001_007215 IPR000189 Prokaryotic transglycosylase, active site M001_007215 IPR012289 Lytic transglycosylase, superhelical linker M001_007220 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_007220 IPR028082 Periplasmic binding protein-like I M001_007220 IPR000843 LacI-type HTH domain M001_007225 IPR013785 Aldolase-type TIM barrel M001_007225 IPR006219 DHAP synthase, class 1 M001_007225 IPR006218 DAHP synthetase I/KDSA M001_007230 IPR010916 TonB box, conserved site M001_007230 IPR000531 TonB-dependent receptor-like, beta-barrel M001_007230 IPR037066 TonB-dependent receptor, plug domain superfamily M001_007230 IPR012910 TonB-dependent receptor, plug domain M001_007230 IPR010917 TonB-dependent receptor, conserved site M001_007230 IPR039426 Vitamin B12 transporter BtuB-like M001_007230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M001_007235 IPR015890 Chorismate-utilising enzyme, C-terminal M001_007235 IPR004561 Isochorismate synthase M001_007235 IPR005801 ADC synthase M001_007240 IPR011963 2,3-dihydroxybenzoate-AMP ligase M001_007240 IPR000873 AMP-dependent synthetase/ligase M001_007240 IPR020845 AMP-binding, conserved site M001_007240 IPR025110 AMP-binding enzyme, C-terminal domain M001_007240 IPR042099 AMP-dependent synthetase-like superfamily M001_007245 IPR016291 Isochorismatase M001_007245 IPR036736 ACP-like superfamily M001_007245 IPR000868 Isochorismatase-like M001_007245 IPR036380 Isochorismatase-like superfamily M001_007245 IPR009081 Phosphopantetheine binding ACP domain M001_007250 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase M001_007250 IPR002347 Short-chain dehydrogenase/reductase SDR M001_007250 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_007250 IPR036291 NAD(P)-binding domain superfamily M001_007255 IPR029058 Alpha/Beta hydrolase fold M001_007255 IPR036736 ACP-like superfamily M001_007255 IPR000873 AMP-dependent synthetase/ligase M001_007255 IPR042099 AMP-dependent synthetase-like superfamily M001_007255 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M001_007255 IPR010071 Amino acid adenylation domain M001_007255 IPR020806 Polyketide synthase, phosphopantetheine-binding domain M001_007255 IPR001242 Condensation domain M001_007255 IPR001031 Thioesterase M001_007255 IPR020845 AMP-binding, conserved site M001_007255 IPR009081 Phosphopantetheine binding ACP domain M001_007255 IPR020802 Polyketide synthase, thioesterase domain M001_007255 IPR006162 Phosphopantetheine attachment site M001_007265 IPR029061 Thiamin diphosphate-binding fold M001_007265 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha M001_007265 IPR001017 Dehydrogenase, E1 component M001_007270 IPR033248 Transketolase, C-terminal domain M001_007270 IPR005475 Transketolase-like, pyrimidine-binding domain M001_007270 IPR029061 Thiamin diphosphate-binding fold M001_007270 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M001_007275 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain M001_007275 IPR000089 Biotin/lipoyl attachment M001_007275 IPR036625 E3-binding domain superfamily M001_007275 IPR004167 Peripheral subunit-binding domain M001_007275 IPR011053 Single hybrid motif M001_007275 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M001_007275 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M001_007280 IPR019844 Cold-shock (CSD) domain M001_007280 IPR012156 Cold shock, CspA M001_007280 IPR012340 Nucleic acid-binding, OB-fold M001_007280 IPR011129 Cold shock domain M001_007280 IPR002059 Cold-shock protein, DNA-binding M001_007305 IPR000914 Solute-binding protein family 5 domain M001_007305 IPR030678 Peptide/nickel binding protein, MppA-type M001_007305 IPR039424 Solute-binding protein family 5 M001_007310 IPR014036 DeoR C-terminal sensor domain M001_007310 IPR036388 Winged helix-like DNA-binding domain superfamily M001_007310 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M001_007310 IPR037171 NagB/RpiA transferase-like M001_007310 IPR001034 DeoR-type HTH domain M001_007310 IPR036390 Winged helix DNA-binding domain superfamily M001_007315 IPR001150 Glycine radical domain M001_007315 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M001_007315 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family M001_007315 IPR004184 Pyruvate formate lyase domain M001_007320 IPR034457 Organic radical-activating enzymes M001_007320 IPR013785 Aldolase-type TIM barrel M001_007320 IPR012839 Organic radical enzyme activase M001_007320 IPR034465 Pyruvate formate-lyase activase M001_007320 IPR001989 Radical-activating enzyme, conserved site M001_007320 IPR007197 Radical SAM M001_007325 IPR013785 Aldolase-type TIM barrel M001_007325 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase M001_007325 IPR018225 Transaldolase, active site M001_007325 IPR001585 Transaldolase/Fructose-6-phosphate aldolase M001_007325 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial M001_007325 IPR023001 Fructose-6-phosphate aldolase M001_007335 IPR003607 HD/PDEase domain M001_007335 IPR037522 HD-GYP domain M001_007335 IPR006674 HD domain M001_007335 IPR006675 HDIG domain M001_007340 IPR036986 RNA-binding S4 domain superfamily M001_007340 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M001_007340 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M001_007340 IPR006145 Pseudouridine synthase, RsuA/RluA M001_007340 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_007340 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M001_007340 IPR002942 RNA-binding S4 domain M001_007350 IPR000914 Solute-binding protein family 5 domain M001_007350 IPR023765 Solute-binding protein family 5, conserved site M001_007350 IPR030678 Peptide/nickel binding protein, MppA-type M001_007350 IPR039424 Solute-binding protein family 5 M001_007355 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type M001_007355 IPR041802 YfcE-like, metallophosphatase domain M001_007355 IPR029052 Metallo-dependent phosphatase-like M001_007355 IPR000979 Phosphodiesterase MJ0936/Vps29 M001_007355 IPR020935 Phosphodiesterase YfcE, conserved site M001_007370 IPR013974 SAF domain M001_007370 IPR039246 Flagellar protein FlgA M001_007370 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M001_007375 IPR001789 Signal transduction response regulator, receiver domain M001_007375 IPR011006 CheY-like superfamily M001_007375 IPR024181 Chemotaxis response regulator CheV M001_007375 IPR036061 CheW-like domain superfamily M001_007375 IPR002545 CheW-like domain M001_007380 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal M001_007380 IPR000780 MCP methyltransferase, CheR-type M001_007380 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal M001_007380 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily M001_007380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_007385 IPR019776 Flagellar basal body rod protein, conserved site M001_007385 IPR001444 Flagellar basal body rod protein, N-terminal M001_007385 IPR006300 Flagellar basal-body rod protein FlgB M001_007390 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_007390 IPR006299 Flagellar basal-body rod protein FlgC M001_007390 IPR001444 Flagellar basal body rod protein, N-terminal M001_007390 IPR019776 Flagellar basal body rod protein, conserved site M001_007395 IPR005648 Flagellar hook capping protein M001_007395 IPR025965 FlgD Ig-like domain M001_007395 IPR025963 FlgD Tudor-like domain M001_007400 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M001_007400 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_007400 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M001_007400 IPR019776 Flagellar basal body rod protein, conserved site M001_007400 IPR001444 Flagellar basal body rod protein, N-terminal M001_007400 IPR037058 Flagellar hook protein FlgE superfamily M001_007400 IPR011491 Flagellar hook protein FlgE M001_007405 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M001_007405 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_007405 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M001_007405 IPR019776 Flagellar basal body rod protein, conserved site M001_007405 IPR001444 Flagellar basal body rod protein, N-terminal M001_007410 IPR019776 Flagellar basal body rod protein, conserved site M001_007410 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M001_007410 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_007410 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M001_007410 IPR012834 Flagellar basal-body rod FlgG M001_007410 IPR001444 Flagellar basal body rod protein, N-terminal M001_007415 IPR000527 Flagellar L-ring protein M001_007420 IPR001782 Flagellar P-ring protein M001_007425 IPR013377 Peptidoglycan hydrolase FlgJ M001_007425 IPR023346 Lysozyme-like domain superfamily M001_007425 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain M001_007425 IPR019301 Flagellar protein FlgJ, N-terminal M001_007430 IPR010810 Flagellin hook, IN motif M001_007430 IPR002371 Flagellar hook-associated protein 1 M001_007430 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M001_007435 IPR001029 Flagellin, D0/D1 domain M001_007435 IPR013384 Flagellar hook-associated protein 3 M001_007440 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily M001_007440 IPR000644 CBS domain M001_007440 IPR006669 Magnesium transporter MgtE M001_007440 IPR038048 Magnesium transporter MgtE, transmembrane domain M001_007440 IPR038076 MgtE, N-terminal domain superfamily M001_007440 IPR006668 Magnesium transporter, MgtE intracellular domain M001_007440 IPR006667 SLC41 divalent cation transporters, integral membrane domain M001_007445 IPR022371 Exopolyphosphatase M001_007445 IPR003695 Ppx/GppA phosphatase M001_007445 IPR030673 Pyrophosphatase, GppA/Ppx-type M001_007450 IPR001736 Phospholipase D/Transphosphatidylase M001_007450 IPR003414 Polyphosphate kinase M001_007450 IPR041108 Polyphosphate kinase, C-terminal domain 1 M001_007450 IPR024953 Polyphosphate kinase middle domain M001_007450 IPR036830 Polyphosphate kinase middle domain superfamily M001_007450 IPR036832 Polyphosphate kinase N-terminal domain superfamily M001_007450 IPR025198 Polyphosphate kinase N-terminal domain M001_007450 IPR025200 Polyphosphate kinase C-terminal domain 2 M001_007455 IPR002912 ACT domain M001_007455 IPR016867 Glycine cleavage system transcriptional repressor M001_007465 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_007465 IPR010518 Flagellar regulatory FleQ M001_007465 IPR002197 DNA binding HTH domain, Fis-type M001_007465 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007465 IPR009057 Homeobox-like domain superfamily M001_007465 IPR025944 Sigma-54 interaction domain, conserved site M001_007465 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_007465 IPR003593 AAA+ ATPase domain M001_007465 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_007465 IPR011006 CheY-like superfamily M001_007470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_007470 IPR005467 Histidine kinase domain M001_007470 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_007470 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_007470 IPR000014 PAS domain M001_007470 IPR000700 PAS-associated, C-terminal M001_007470 IPR035965 PAS domain superfamily M001_007470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_007470 IPR003594 Histidine kinase/HSP90-like ATPase M001_007470 IPR003660 HAMP domain M001_007470 IPR013767 PAS fold M001_007475 IPR025944 Sigma-54 interaction domain, conserved site M001_007475 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_007475 IPR001789 Signal transduction response regulator, receiver domain M001_007475 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007475 IPR002197 DNA binding HTH domain, Fis-type M001_007475 IPR009057 Homeobox-like domain superfamily M001_007475 IPR029995 Transcriptional activator SfnR/FlbD M001_007475 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_007475 IPR011006 CheY-like superfamily M001_007475 IPR003593 AAA+ ATPase domain M001_007475 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_007480 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 M001_007480 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily M001_007485 IPR036477 Formyl transferase, N-terminal domain superfamily M001_007485 IPR004607 Phosphoribosylglycinamide formyltransferase M001_007485 IPR001555 Phosphoribosylglycinamide formyltransferase, active site M001_007485 IPR002376 Formyl transferase, N-terminal M001_007490 IPR010918 PurM-like, C-terminal domain M001_007490 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase M001_007490 IPR036676 PurM-like, C-terminal domain superfamily M001_007490 IPR036921 PurM-like, N-terminal domain superfamily M001_007490 IPR016188 PurM-like, N-terminal domain M001_007495 IPR029057 Phosphoribosyltransferase-like M001_007495 IPR034332 Uracil phosphoribosyltransferase, bacterial-type M001_007495 IPR005765 Uracil phosphoribosyl transferase M001_007495 IPR000836 Phosphoribosyltransferase domain M001_007505 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007505 IPR020591 Chromosomal replication control, initiator DnaA-like M001_007505 IPR013317 Chromosomal replication initiator protein DnaA M001_007505 IPR017788 DnaA regulatory inactivator Hda M001_007505 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae M001_007510 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_007510 IPR039556 ICL/PEPM domain M001_007510 IPR040442 Pyruvate kinase-like domain superfamily M001_007510 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site M001_007510 IPR006254 Isocitrate lyase M001_007515 IPR019830 Malate synthase, conserved site M001_007515 IPR011076 Malate synthase-like superfamily M001_007515 IPR001465 Malate synthase M001_007515 IPR006252 Malate synthase A M001_007530 IPR016193 Cytidine deaminase-like M001_007530 IPR016192 APOBEC/CMP deaminase, zinc-binding M001_007530 IPR028883 tRNA-specific adenosine deaminase M001_007530 IPR002125 Cytidine and deoxycytidylate deaminase domain M001_007535 IPR035906 MetI-like superfamily M001_007535 IPR011864 Phosphate ABC transporter, permease protein PstC M001_007535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_007540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_007540 IPR005672 Phosphate transport system permease protein PstA M001_007540 IPR035906 MetI-like superfamily M001_007545 IPR005670 Phosphate transport system permease protein 1 M001_007545 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007545 IPR003439 ABC transporter-like M001_007545 IPR017871 ABC transporter, conserved site M001_007545 IPR015850 ABC transporter, phosphate import, PstB M001_007545 IPR003593 AAA+ ATPase domain M001_007550 IPR028366 Phosphate transport system protein PhoU M001_007550 IPR038078 PhoU-like domain superfamily M001_007550 IPR026022 PhoU domain M001_007555 IPR000644 CBS domain M001_007555 IPR002550 CNNM, transmembrane domain M001_007555 IPR036318 FAD-binding, type PCMH-like superfamily M001_007555 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_007555 IPR005170 Transporter-associated domain M001_007565 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily M001_007565 IPR033706 Methionine synthase, B12-binding domain M001_007565 IPR036724 Cobalamin-binding domain superfamily M001_007565 IPR004223 Vitamin B12-dependent methionine synthase, activation domain M001_007565 IPR036589 Homocysteine-binding domain superfamily M001_007565 IPR000489 Pterin-binding domain M001_007565 IPR036594 Methionine synthase domain M001_007565 IPR011005 Dihydropteroate synthase-like M001_007565 IPR006158 Cobalamin (vitamin B12)-binding domain M001_007565 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain M001_007565 IPR011822 Cobalamin-dependent methionine synthase M001_007565 IPR003726 Homocysteine-binding domain M001_007570 IPR002293 Amino acid/polyamine transporter I M001_007570 IPR004754 Amino acid antiporter M001_007575 IPR006694 Fatty acid hydroxylase M001_007585 IPR003593 AAA+ ATPase domain M001_007585 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M001_007585 IPR003439 ABC transporter-like M001_007585 IPR017871 ABC transporter, conserved site M001_007585 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007590 IPR035906 MetI-like superfamily M001_007590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_007590 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M001_007595 IPR001320 Ionotropic glutamate receptor M001_007595 IPR018313 Solute-binding protein family 3, conserved site M001_007595 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_007595 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M001_007600 IPR000160 GGDEF domain M001_007600 IPR029787 Nucleotide cyclase M001_007600 IPR029016 GAF-like domain superfamily M001_007605 IPR020846 Major facilitator superfamily domain M001_007605 IPR011701 Major facilitator superfamily M001_007605 IPR000849 Sugar phosphate transporter M001_007605 IPR021159 Glycerate/sugar phosphate transporter, conserved site M001_007605 IPR036259 MFS transporter superfamily M001_007610 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain M001_007610 IPR007895 MASE1 M001_007610 IPR005467 Histidine kinase domain M001_007610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_007610 IPR003594 Histidine kinase/HSP90-like ATPase M001_007615 IPR000792 Transcription regulator LuxR, C-terminal M001_007615 IPR001789 Signal transduction response regulator, receiver domain M001_007615 IPR016032 Signal transduction response regulator, C-terminal effector M001_007615 IPR011006 CheY-like superfamily M001_007620 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain M001_007620 IPR023459 Transcription elongation factor GreA/GreB family M001_007620 IPR028625 Regulator of nucleoside diphosphate kinase M001_007620 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily M001_007620 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal M001_007635 IPR001952 Alkaline phosphatase M001_007635 IPR018299 Alkaline phosphatase, active site M001_007635 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_007640 IPR001952 Alkaline phosphatase M001_007640 IPR018299 Alkaline phosphatase, active site M001_007640 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_007645 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain M001_007645 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily M001_007645 IPR019991 GTP-binding protein, ribosome biogenesis M001_007645 IPR006073 GTP binding domain M001_007645 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007645 IPR016478 GTPase, MTG1 M001_007650 IPR023696 Ureohydrolase domain superfamily M001_007650 IPR037138 Histone deacetylase domain superfamily M001_007650 IPR023801 Histone deacetylase domain M001_007650 IPR000286 Histone deacetylase family M001_007660 IPR001650 Helicase, C-terminal M001_007660 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_007660 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type M001_007660 IPR039000 ATP-dependent DNA helicase DinG M001_007660 IPR006555 ATP-dependent helicase, C-terminal M001_007660 IPR010614 DEAD2 M001_007665 IPR033900 Porin domain, Gram-negative type M001_007665 IPR002299 Porin, Neisseria sp. type M001_007665 IPR023614 Porin domain superfamily M001_007670 IPR003099 Prephenate dehydrogenase M001_007670 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_007670 IPR036979 Chorismate mutase domain superfamily M001_007670 IPR036263 Chorismate mutase type II superfamily M001_007670 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein M001_007670 IPR011277 Chorismate mutase, T-protein M001_007670 IPR002701 Chorismate mutase II, prokaryotic-type M001_007670 IPR036291 NAD(P)-binding domain superfamily M001_007675 IPR006219 DHAP synthase, class 1 M001_007675 IPR013785 Aldolase-type TIM barrel M001_007675 IPR006218 DAHP synthetase I/KDSA M001_007680 IPR005836 ADP-glucose pyrophosphorylase, conserved site M001_007680 IPR011831 Glucose-1-phosphate adenylyltransferase M001_007680 IPR029044 Nucleotide-diphospho-sugar transferases M001_007680 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial M001_007680 IPR005835 Nucleotidyl transferase domain M001_007680 IPR011004 Trimeric LpxA-like superfamily M001_007685 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M001_007685 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M001_007685 IPR005665 Protein-export membrane protein SecF, bacterial M001_007685 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M001_007690 IPR027398 SecD export protein N-terminal TM domain M001_007690 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M001_007690 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M001_007690 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M001_007690 IPR005791 Protein translocase subunit SecD M001_007725 IPR036265 HIT-like superfamily M001_007725 IPR001310 Histidine triad (HIT) protein M001_007725 IPR019808 Histidine triad, conserved site M001_007725 IPR011146 HIT-like domain M001_007730 IPR004090 Chemotaxis methyl-accepting receptor M001_007730 IPR003660 HAMP domain M001_007730 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_007740 IPR032466 Metal-dependent hydrolase M001_007740 IPR002195 Dihydroorotase, conserved site M001_007740 IPR004722 Dihydroorotase M001_007740 IPR006680 Amidohydrolase-related M001_007740 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_007755 IPR036458 Sodium:dicarboxylate symporter superfamily M001_007755 IPR018107 Sodium:dicarboxylate symporter, conserved site M001_007755 IPR001991 Sodium:dicarboxylate symporter M001_007755 IPR023954 C4-dicarboxylate transport protein M001_007760 IPR003660 HAMP domain M001_007760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_007775 IPR008526 Inner membrane protein YedI M001_007780 IPR042088 Oligoendopeptidase F, C-terminal domain M001_007780 IPR013647 Oligopeptidase F, N-terminal domain M001_007780 IPR004438 Peptidase M3B, oligoendopeptidase F M001_007780 IPR001567 Peptidase M3A/M3B catalytic domain M001_007785 IPR006043 Xanthine/uracil/vitamin C permease M001_007785 IPR006042 Xanthine/uracil permease M001_007785 IPR017588 Uric acid permease UacT-like M001_007790 IPR029058 Alpha/Beta hydrolase fold M001_007790 IPR022987 Uncharacterised protein family UPF0227 M001_007790 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA M001_007795 IPR036188 FAD/NAD(P)-binding domain superfamily M001_007795 IPR023753 FAD/NAD(P)-binding domain M001_007805 IPR001989 Radical-activating enzyme, conserved site M001_007805 IPR013785 Aldolase-type TIM barrel M001_007805 IPR034457 Organic radical-activating enzymes M001_007805 IPR012839 Organic radical enzyme activase M001_007805 IPR007197 Radical SAM M001_007805 IPR012838 Pyruvate formate-lyase 1 activating enzyme M001_007805 IPR034465 Pyruvate formate-lyase activase M001_007810 IPR001633 EAL domain M001_007810 IPR035919 EAL domain superfamily M001_007810 IPR000160 GGDEF domain M001_007810 IPR029787 Nucleotide cyclase M001_007810 IPR005330 MHYT domain M001_007815 IPR036188 FAD/NAD(P)-binding domain superfamily M001_007815 IPR023536 Coenzyme A disulphide reductase, staphyolococci M001_007815 IPR017758 Coenzyme A disulphide reductase M001_007815 IPR023753 FAD/NAD(P)-binding domain M001_007815 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M001_007815 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_007825 IPR021868 Alpha-2-macroglobulin MG3 domain M001_007825 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain M001_007825 IPR011625 Alpha-2-macroglobulin, bait region domain M001_007825 IPR026284 Alpha-2-macroglobulin, bacteria M001_007825 IPR040639 Alpha-2-macroglobulin, MG1 domain M001_007825 IPR011626 Alpha-macroglobulin-like, TED domain M001_007825 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain M001_007825 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain M001_007825 IPR001599 Alpha-2-macroglobulin M001_007825 IPR002890 Macroglobulin domain M001_007825 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid M001_007830 IPR012338 Beta-lactamase/transpeptidase-like M001_007830 IPR023346 Lysozyme-like domain superfamily M001_007830 IPR001264 Glycosyl transferase, family 51 M001_007830 IPR001460 Penicillin-binding protein, transpeptidase M001_007830 IPR036950 Penicillin binding protein transglycosylase domain M001_007830 IPR011815 Penicillin-binding protein 1C M001_007830 IPR009647 Penicillin-binding, C-terminal M001_007840 IPR003720 tRNA sulfurtransferase ThiI M001_007840 IPR036873 Rhodanese-like domain superfamily M001_007840 IPR026340 Thiazole biosynthesis domain M001_007840 IPR020536 Thil, AANH domain M001_007840 IPR004114 THUMP domain M001_007840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_007840 IPR001763 Rhodanese-like domain M001_007845 IPR012337 Ribonuclease H-like superfamily M001_007845 IPR002559 Transposase, IS4-like M001_007845 IPR024473 Transposase, IS4, N-terminal M001_007855 IPR005115 Uncharacterised domain UPF0126 M001_007860 IPR042187 Flagellin, C-terminal domain, subdomain 2 M001_007860 IPR001029 Flagellin, D0/D1 domain M001_007860 IPR001492 Flagellin M001_007865 IPR042187 Flagellin, C-terminal domain, subdomain 2 M001_007865 IPR001029 Flagellin, D0/D1 domain M001_007865 IPR001492 Flagellin M001_007875 IPR010810 Flagellin hook, IN motif M001_007875 IPR010809 Flagellar hook-associated protein 2, C-terminal M001_007875 IPR040026 Flagellar hook-associated protein 2 M001_007875 IPR003481 Flagellar hook-associated protein 2, N-terminal M001_007880 IPR036584 Flagellar protein FliS superfamily M001_007880 IPR003713 Flagellar protein FliS M001_007905 IPR013974 SAF domain M001_007905 IPR020030 Pseudaminic acid biosynthesis, PseI M001_007905 IPR013785 Aldolase-type TIM barrel M001_007905 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily M001_007905 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal M001_007905 IPR013132 N-acetylneuraminic acid synthase, N-terminal M001_007915 IPR020039 Pseudaminic acid cytidylyltransferase M001_007915 IPR029044 Nucleotide-diphospho-sugar transferases M001_007915 IPR003329 Acylneuraminate cytidylyltransferase M001_007930 IPR002347 Short-chain dehydrogenase/reductase SDR M001_007930 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase M001_007930 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_007930 IPR036291 NAD(P)-binding domain superfamily M001_007935 IPR042099 AMP-dependent synthetase-like superfamily M001_007935 IPR000873 AMP-dependent synthetase/ligase M001_007935 IPR020845 AMP-binding, conserved site M001_007935 IPR020459 AMP-binding M001_007935 IPR025110 AMP-binding enzyme, C-terminal domain M001_007950 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA M001_007950 IPR029044 Nucleotide-diphospho-sugar transferases M001_007950 IPR001173 Glycosyltransferase 2-like M001_007955 IPR015899 UDP-galactopyranose mutase, C-terminal M001_007955 IPR004379 UDP-galactopyranose mutase M001_007960 IPR029044 Nucleotide-diphospho-sugar transferases M001_007960 IPR001173 Glycosyltransferase 2-like M001_007975 IPR029044 Nucleotide-diphospho-sugar transferases M001_007975 IPR007554 CDP-glycerol glycerophosphotransferase M001_007975 IPR001173 Glycosyltransferase 2-like M001_007985 IPR035461 GmhA/DiaA M001_007985 IPR004515 Phosphoheptose isomerase M001_007985 IPR001347 Sugar isomerase (SIS) M001_007990 IPR000683 Oxidoreductase, N-terminal M001_007990 IPR036291 NAD(P)-binding domain superfamily M001_007990 IPR004104 Oxidoreductase, C-terminal M001_007995 IPR002347 Short-chain dehydrogenase/reductase SDR M001_007995 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase M001_007995 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_007995 IPR036291 NAD(P)-binding domain superfamily M001_008000 IPR030963 3-dehydroquinate synthase family M001_008000 IPR030960 3-dehydroquinate synthase domain M001_008000 IPR016037 3-dehydroquinate synthase AroB M001_008005 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M001_008005 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M001_008005 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M001_008005 IPR002912 ACT domain M001_008005 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_008005 IPR036291 NAD(P)-binding domain superfamily M001_008010 IPR029044 Nucleotide-diphospho-sugar transferases M001_008010 IPR003329 Acylneuraminate cytidylyltransferase M001_008020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_008020 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_008020 IPR005814 Aminotransferase class-III M001_008020 IPR017657 L-lysine 6-transaminase M001_008020 IPR015424 Pyridoxal phosphate-dependent transferase M001_008025 IPR015424 Pyridoxal phosphate-dependent transferase M001_008025 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase M001_008025 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_008025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_008030 IPR036291 NAD(P)-binding domain superfamily M001_008030 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain M001_008030 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) M001_008035 IPR002491 ABC transporter periplasmic binding domain M001_008035 IPR023544 ABC transporter, vitamin B12-binding protein M001_008045 IPR035994 Nucleoside phosphorylase superfamily M001_008045 IPR000845 Nucleoside phosphorylase domain M001_008045 IPR010049 MTA/SAH nucleosidase M001_008050 IPR003689 Zinc/iron permease M001_008055 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M001_008055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_008055 IPR003660 HAMP domain M001_008055 IPR004090 Chemotaxis methyl-accepting receptor M001_008060 IPR033942 Inositol monophosphatase M001_008060 IPR020583 Inositol monophosphatase, metal-binding site M001_008060 IPR000760 Inositol monophosphatase-like M001_008060 IPR022337 Inositol monophosphatase, SuhB M001_008060 IPR020550 Inositol monophosphatase, conserved site M001_008070 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M001_008070 IPR004046 Glutathione S-transferase, C-terminal M001_008070 IPR004045 Glutathione S-transferase, N-terminal M001_008070 IPR036249 Thioredoxin-like superfamily M001_008070 IPR010987 Glutathione S-transferase, C-terminal-like M001_008075 IPR004734 Multidrug resistance protein M001_008075 IPR011701 Major facilitator superfamily M001_008075 IPR020846 Major facilitator superfamily domain M001_008075 IPR036259 MFS transporter superfamily M001_008080 IPR036390 Winged helix DNA-binding domain superfamily M001_008080 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008080 IPR000847 Transcription regulator HTH, LysR M001_008080 IPR005119 LysR, substrate-binding M001_008085 IPR003786 Sulfur carrier protein FdhD M001_008085 IPR016193 Cytidine deaminase-like M001_008090 IPR009010 Aspartate decarboxylase-like domain superfamily M001_008090 IPR010046 Oxidoreductase alpha (molybdopterin) subunit M001_008090 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain M001_008090 IPR037951 YdeP-like, MopB domain M001_008090 IPR006656 Molybdopterin oxidoreductase M001_008100 IPR023771 Cell division protein ZapA, eubacteria M001_008100 IPR036192 Cell division protein ZapA-like superfamily M001_008100 IPR007838 Cell division protein ZapA-like M001_008105 IPR011978 Uncharacterised protein family UPF0149 M001_008105 IPR036255 YgfB-like superfamily M001_008110 IPR036188 FAD/NAD(P)-binding domain superfamily M001_008110 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 M001_008110 IPR002938 FAD-binding domain M001_008110 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase M001_008110 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site M001_008115 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 M001_008115 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site M001_008115 IPR036188 FAD/NAD(P)-binding domain superfamily M001_008115 IPR002938 FAD-binding domain M001_008120 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 M001_008120 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal M001_008120 IPR006222 Aminomethyltransferase, folate-binding domain M001_008120 IPR022903 Glycine cleavage system T protein, bacteria M001_008120 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain M001_008120 IPR028896 Aminomethyltransferase-like M001_008120 IPR006223 Glycine cleavage system T protein M001_008125 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M001_008125 IPR000089 Biotin/lipoyl attachment M001_008125 IPR002930 Glycine cleavage system H-protein M001_008125 IPR033753 Glycine cleavage system H-protein/Simiate M001_008125 IPR017453 Glycine cleavage system H-protein, subgroup M001_008125 IPR011053 Single hybrid motif M001_008130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_008130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_008130 IPR015424 Pyridoxal phosphate-dependent transferase M001_008130 IPR020581 Glycine cleavage system P protein M001_008130 IPR003437 Glycine dehydrogenase (decarboxylating) M001_008135 IPR013655 PAS fold-3 M001_008135 IPR035965 PAS domain superfamily M001_008135 IPR000014 PAS domain M001_008135 IPR001610 PAC motif M001_008135 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_008135 IPR004090 Chemotaxis methyl-accepting receptor M001_008135 IPR003660 HAMP domain M001_008150 IPR004840 Amino acid permease, conserved site M001_008150 IPR004841 Amino acid permease/ SLC12A domain M001_008160 IPR026530 Phosphoenolpyruvate synthase regulatory protein M001_008160 IPR005177 Bifunctional kinase-pyrophosphorylase M001_008165 IPR008279 PEP-utilising enzyme, mobile domain M001_008165 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding M001_008165 IPR018274 PEP-utilising enzyme, active site M001_008165 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_008165 IPR036637 Phosphohistidine domain superfamily M001_008165 IPR023151 PEP-utilising enzyme, conserved site M001_008165 IPR000121 PEP-utilising enzyme, C-terminal M001_008165 IPR040442 Pyruvate kinase-like domain superfamily M001_008165 IPR006319 Phosphoenolpyruvate synthase M001_008165 IPR013815 ATP-grasp fold, subdomain 1 M001_008170 IPR012337 Ribonuclease H-like superfamily M001_008170 IPR024473 Transposase, IS4, N-terminal M001_008170 IPR002559 Transposase, IS4-like M001_008180 IPR015500 Peptidase S8, subtilisin-related M001_008180 IPR023828 Peptidase S8, subtilisin, Ser-active site M001_008180 IPR023827 Peptidase S8, subtilisin, Asp-active site M001_008180 IPR036852 Peptidase S8/S53 domain superfamily M001_008180 IPR000209 Peptidase S8/S53 domain M001_008180 IPR002884 P domain M001_008180 IPR008979 Galactose-binding-like domain superfamily M001_008185 IPR004872 Lipoprotein NlpA family M001_008190 IPR000917 Sulfatase, N-terminal M001_008190 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_008190 IPR024588 Inner membrane protein YejM, N-terminal M001_008190 IPR012159 Inner membrane protein YejM M001_008195 IPR023202 YejL-like superfamily M001_008195 IPR009857 Uncharacterised protein family UPF0352 M001_008200 IPR007358 Nucleoid-associated protein NdpA M001_008205 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein M001_008205 IPR006059 Bacterial extracellular solute-binding protein M001_008205 IPR006061 Solute-binding family 1, conserved site M001_008210 IPR035906 MetI-like superfamily M001_008210 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_008210 IPR029345 Maltose transport system permease protein MalF, P2 domain M001_008210 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like M001_008210 IPR035277 MalF, N-terminal M001_008215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_008215 IPR035906 MetI-like superfamily M001_008220 IPR003439 ABC transporter-like M001_008220 IPR017871 ABC transporter, conserved site M001_008220 IPR008995 Molybdate/tungstate binding, C-terminal M001_008220 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008220 IPR013611 Transport-associated OB, type 2 M001_008220 IPR015855 ABC transporter, maltose/maltodextrin import, MalK M001_008220 IPR003593 AAA+ ATPase domain M001_008225 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008225 IPR022486 Polyphosphate kinase 2, PA0141 M001_008225 IPR022488 Polyphosphate kinase-2-related M001_008225 IPR016898 Polyphosphate kinase 2 M001_008230 IPR000639 Epoxide hydrolase-like M001_008230 IPR029058 Alpha/Beta hydrolase fold M001_008230 IPR000073 Alpha/beta hydrolase fold-1 M001_008230 IPR023594 Haloalkane dehalogenase, subfamily 2 M001_008235 IPR012337 Ribonuclease H-like superfamily M001_008235 IPR002559 Transposase, IS4-like M001_008235 IPR024473 Transposase, IS4, N-terminal M001_008245 IPR002549 Transmembrane protein TqsA-like M001_008255 IPR030873 Beta-barrel assembly-enhancing protease M001_008255 IPR001915 Peptidase M48 M001_008255 IPR011716 Tetratricopeptide TPR-3 M001_008255 IPR011990 Tetratricopeptide-like helical domain superfamily M001_008260 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M001_008260 IPR023555 Thiol-disulphide oxidoreductase ResA M001_008260 IPR036249 Thioredoxin-like superfamily M001_008260 IPR013766 Thioredoxin domain M001_008265 IPR006660 Arsenate reductase-like M001_008265 IPR006659 Arsenate reductase M001_008265 IPR036249 Thioredoxin-like superfamily M001_008275 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria M001_008275 IPR007431 Acyl carrier protein phosphodiesterase M001_008285 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_008285 IPR018313 Solute-binding protein family 3, conserved site M001_008285 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M001_008285 IPR001320 Ionotropic glutamate receptor M001_008290 IPR010229 Peptidase M38, beta-aspartyl dipeptidase M001_008290 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_008290 IPR033826 Isoaspartyl-dipeptidase M001_008290 IPR006680 Amidohydrolase-related M001_008290 IPR032466 Metal-dependent hydrolase M001_008295 IPR005642 Lysine exporter LysO M001_008300 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008300 IPR017871 ABC transporter, conserved site M001_008300 IPR003439 ABC transporter-like M001_008300 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M001_008300 IPR003593 AAA+ ATPase domain M001_008305 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M001_008305 IPR018313 Solute-binding protein family 3, conserved site M001_008305 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_008310 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M001_008310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_008310 IPR035906 MetI-like superfamily M001_008310 IPR030199 Histidine transport system permease protein HisQ M001_008315 IPR035906 MetI-like superfamily M001_008315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_008315 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M001_008320 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_008320 IPR006508 Pseudouridine synthase, RluA-like M001_008320 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M001_008320 IPR006145 Pseudouridine synthase, RsuA/RluA M001_008330 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal M001_008330 IPR005956 4-hydroxyphenylpyruvate dioxygenase M001_008330 IPR037523 Vicinal oxygen chelate (VOC) domain M001_008330 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M001_008330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M001_008330 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal M001_008335 IPR005708 Homogentisate 1,2-dioxygenase M001_008335 IPR014710 RmlC-like jelly roll fold M001_008335 IPR011051 RmlC-like cupin domain superfamily M001_008345 IPR005955 Glutathione S-transferases, class Zeta M001_008345 IPR034330 Glutathione S-transferases, class Zeta , C-terminal M001_008345 IPR010987 Glutathione S-transferase, C-terminal-like M001_008345 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M001_008345 IPR004045 Glutathione S-transferase, N-terminal M001_008345 IPR034333 Glutathione S-transferases, class Zeta , N-terminal M001_008345 IPR036249 Thioredoxin-like superfamily M001_008345 IPR004046 Glutathione S-transferase, C-terminal M001_008345 IPR040079 Glutathione Transferase family M001_008360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_008360 IPR029055 Nucleophile aminohydrolases, N-terminal M001_008360 IPR017932 Glutamine amidotransferase type 2 domain M001_008360 IPR033738 Asparagine synthase, N-terminal domain M001_008360 IPR001962 Asparagine synthase M001_008360 IPR006426 Asparagine synthase, glutamine-hydrolyzing M001_008370 IPR006153 Cation/H+ exchanger M001_008370 IPR004771 K+/H+ exchanger M001_008370 IPR038770 Sodium/solute symporter superfamily M001_008370 IPR003148 Regulator of K+ conductance, N-terminal M001_008370 IPR036291 NAD(P)-binding domain superfamily M001_008375 IPR023214 HAD superfamily M001_008375 IPR006357 HAD-superfamily hydrolase, subfamily IIA M001_008375 IPR036412 HAD-like superfamily M001_008380 IPR032466 Metal-dependent hydrolase M001_008380 IPR006330 Adenosine/adenine deaminase M001_008380 IPR028892 Adenine deaminase type 2 M001_008380 IPR001365 Adenosine/AMP deaminase domain M001_008385 IPR036291 NAD(P)-binding domain superfamily M001_008385 IPR011032 GroES-like superfamily M001_008385 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site M001_008385 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 M001_008385 IPR013154 Alcohol dehydrogenase, N-terminal M001_008385 IPR013149 Alcohol dehydrogenase, C-terminal M001_008385 IPR020843 Polyketide synthase, enoylreductase domain M001_008390 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M001_008390 IPR013785 Aldolase-type TIM barrel M001_008395 IPR005496 Integral membrane protein TerC M001_008395 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_008395 IPR036318 FAD-binding, type PCMH-like superfamily M001_008395 IPR000644 CBS domain M001_008395 IPR005170 Transporter-associated domain M001_008405 IPR016164 FAD-linked oxidase-like, C-terminal M001_008405 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_008405 IPR004113 FAD-linked oxidase, C-terminal M001_008405 IPR009051 Alpha-helical ferredoxin M001_008405 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_008405 IPR006094 FAD linked oxidase, N-terminal M001_008405 IPR016166 FAD-binding domain, PCMH-type M001_008405 IPR036318 FAD-binding, type PCMH-like superfamily M001_008415 IPR006683 Thioesterase domain M001_008415 IPR029069 HotDog domain superfamily M001_008415 IPR003736 Phenylacetic acid degradation-related domain M001_008420 IPR014014 RNA helicase, DEAD-box type, Q motif M001_008420 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_008420 IPR034415 CsdA, RNA recognition motif M001_008420 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_008420 IPR028618 ATP-dependent RNA helicase DeaD M001_008420 IPR001650 Helicase, C-terminal M001_008420 IPR011545 DEAD/DEAH box helicase domain M001_008420 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain M001_008420 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M001_008420 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008430 IPR035965 PAS domain superfamily M001_008430 IPR001633 EAL domain M001_008430 IPR000160 GGDEF domain M001_008430 IPR029787 Nucleotide cyclase M001_008430 IPR000014 PAS domain M001_008430 IPR005330 MHYT domain M001_008430 IPR035919 EAL domain superfamily M001_008435 IPR003607 HD/PDEase domain M001_008435 IPR000160 GGDEF domain M001_008435 IPR037522 HD-GYP domain M001_008435 IPR006674 HD domain M001_008435 IPR029787 Nucleotide cyclase M001_008440 IPR001789 Signal transduction response regulator, receiver domain M001_008440 IPR037522 HD-GYP domain M001_008440 IPR011006 CheY-like superfamily M001_008440 IPR003607 HD/PDEase domain M001_008450 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit M001_008450 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 M001_008455 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit M001_008455 IPR010227 NADH-quinone oxidoreductase, chain M/4 M001_008455 IPR003918 NADH:ubiquinone oxidoreductase M001_008460 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal M001_008460 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup M001_008460 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit M001_008460 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 M001_008465 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K M001_008465 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like M001_008470 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ M001_008470 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 M001_008475 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_008475 IPR010226 NADH-quinone oxidoreductase, chain I M001_008475 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_008480 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site M001_008480 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H M001_008485 IPR009010 Aspartate decarboxylase-like domain superfamily M001_008485 IPR036010 2Fe-2S ferredoxin-like superfamily M001_008485 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding M001_008485 IPR006656 Molybdopterin oxidoreductase M001_008485 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M001_008485 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site M001_008485 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site M001_008485 IPR010228 NADH:ubiquinone oxidoreductase, subunit G M001_008485 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_008490 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain M001_008490 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily M001_008490 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily M001_008490 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site M001_008490 IPR011537 NADH ubiquinone oxidoreductase, F subunit M001_008490 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain M001_008495 IPR036249 Thioredoxin-like superfamily M001_008495 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal M001_008495 IPR002023 NADH-quinone oxidoreductase subunit E-like M001_008495 IPR042128 NuoE domain M001_008500 IPR023062 NADH dehydrogenase, subunit CD M001_008500 IPR029014 [NiFe]-hydrogenase, large subunit M001_008500 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H M001_008500 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site M001_008500 IPR001135 NADH-quinone oxidoreductase, subunit D M001_008500 IPR010218 NADH dehydrogenase, subunit C M001_008500 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit M001_008500 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily M001_008500 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily M001_008505 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit M001_008505 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit M001_008510 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily M001_008510 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 M001_008510 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid M001_008530 IPR029058 Alpha/Beta hydrolase fold M001_008530 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain M001_008530 IPR023302 Peptidase S9A, N-terminal domain M001_008530 IPR002471 Peptidase S9, serine active site M001_008530 IPR002470 Peptidase S9A, prolyl oligopeptidase M001_008535 IPR039426 Vitamin B12 transporter BtuB-like M001_008535 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M001_008535 IPR010916 TonB box, conserved site M001_008535 IPR000531 TonB-dependent receptor-like, beta-barrel M001_008535 IPR037066 TonB-dependent receptor, plug domain superfamily M001_008535 IPR012910 TonB-dependent receptor, plug domain M001_008535 IPR010917 TonB-dependent receptor, conserved site M001_008540 IPR006665 OmpA-like domain M001_008540 IPR036737 OmpA-like domain superfamily M001_008540 IPR025713 Motility protein B, N-terminal domain M001_008545 IPR002898 MotA/TolQ/ExbB proton channel M001_008545 IPR000540 Flagellar motor protein MotA, conserved site M001_008560 IPR007621 TPM domain M001_008570 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase M001_008570 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily M001_008575 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M001_008575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_008575 IPR035906 MetI-like superfamily M001_008580 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_008580 IPR018313 Solute-binding protein family 3, conserved site M001_008580 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M001_008580 IPR001320 Ionotropic glutamate receptor M001_008585 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M001_008585 IPR035906 MetI-like superfamily M001_008585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_008590 IPR017871 ABC transporter, conserved site M001_008590 IPR003593 AAA+ ATPase domain M001_008590 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M001_008590 IPR003439 ABC transporter-like M001_008590 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008600 IPR000504 RNA recognition motif domain M001_008600 IPR035979 RNA-binding domain superfamily M001_008600 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M001_008605 IPR023210 NADP-dependent oxidoreductase domain M001_008605 IPR020471 Aldo/keto reductase M001_008605 IPR036812 NADP-dependent oxidoreductase domain superfamily M001_008615 IPR002347 Short-chain dehydrogenase/reductase SDR M001_008615 IPR036291 NAD(P)-binding domain superfamily M001_008620 IPR023603 Threonine aldolase M001_008620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_008620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_008620 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase M001_008620 IPR015424 Pyridoxal phosphate-dependent transferase M001_008630 IPR001789 Signal transduction response regulator, receiver domain M001_008630 IPR037522 HD-GYP domain M001_008630 IPR011006 CheY-like superfamily M001_008630 IPR003607 HD/PDEase domain M001_008635 IPR000847 Transcription regulator HTH, LysR M001_008635 IPR036390 Winged helix DNA-binding domain superfamily M001_008635 IPR005119 LysR, substrate-binding M001_008635 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008640 IPR029787 Nucleotide cyclase M001_008640 IPR000014 PAS domain M001_008640 IPR001633 EAL domain M001_008640 IPR035965 PAS domain superfamily M001_008640 IPR035919 EAL domain superfamily M001_008640 IPR000160 GGDEF domain M001_008640 IPR005330 MHYT domain M001_008645 IPR011540 AbgT, Proteobacteria M001_008645 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT M001_008650 IPR000415 Nitroreductase-like M001_008650 IPR016446 Flavin oxidoreductase Frp family M001_008650 IPR029479 Nitroreductase M001_008665 IPR020846 Major facilitator superfamily domain M001_008665 IPR011701 Major facilitator superfamily M001_008665 IPR005829 Sugar transporter, conserved site M001_008665 IPR036259 MFS transporter superfamily M001_008670 IPR005119 LysR, substrate-binding M001_008670 IPR000847 Transcription regulator HTH, LysR M001_008670 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008670 IPR036390 Winged helix DNA-binding domain superfamily M001_008675 IPR005119 LysR, substrate-binding M001_008675 IPR000847 Transcription regulator HTH, LysR M001_008675 IPR036390 Winged helix DNA-binding domain superfamily M001_008675 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008680 IPR036144 RibA-like superfamily M001_008680 IPR032677 GTP cyclohydrolase II M001_008680 IPR000926 GTP cyclohydrolase II, RibA M001_008685 IPR003136 Cytidylate kinase M001_008685 IPR011994 Cytidylate kinase domain M001_008685 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008690 IPR000110 Ribosomal protein S1 M001_008690 IPR022967 RNA-binding domain, S1 M001_008690 IPR003029 S1 domain M001_008690 IPR012340 Nucleic acid-binding, OB-fold M001_008695 IPR020816 Histone-like DNA-binding protein, conserved site M001_008695 IPR000119 Histone-like DNA-binding protein M001_008695 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M001_008695 IPR005685 Integration host factor, beta subunit M001_008705 IPR041166 LapB, rubredoxin metal binding domain M001_008705 IPR011990 Tetratricopeptide-like helical domain superfamily M001_008705 IPR030865 Lipopolysaccharide assembly protein B M001_008705 IPR019734 Tetratricopeptide repeat M001_008705 IPR013026 Tetratricopeptide repeat-containing domain M001_008710 IPR013785 Aldolase-type TIM barrel M001_008710 IPR011060 Ribulose-phosphate binding barrel M001_008710 IPR001754 Orotidine 5'-phosphate decarboxylase domain M001_008710 IPR018089 Orotidine 5'-phosphate decarboxylase, active site M001_008710 IPR014732 Orotidine 5'-phosphate decarboxylase M001_008725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_008725 IPR018317 Queuosine biosynthesis protein QueC M001_008730 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria M001_008730 IPR024924 7-carboxy-7-deazaguanine synthase-like M001_008730 IPR013785 Aldolase-type TIM barrel M001_008730 IPR007197 Radical SAM M001_008735 IPR024530 Putative quorum-sensing-regulated virulence factor M001_008740 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type M001_008740 IPR036451 Cobalamin adenosyltransferase-like superfamily M001_008740 IPR016030 Cobalamin adenosyltransferase-like M001_008745 IPR001801 Histone-like protein H-NS M001_008745 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily M001_008745 IPR027454 Histone-like protein H-NS, N-terminal M001_008745 IPR027444 Histone-like protein H-NS, C-terminal domain M001_008750 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal M001_008755 IPR001267 Thymidine kinase M001_008755 IPR020633 Thymidine kinase, conserved site M001_008755 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008770 IPR019660 Putative sensory transduction regulator YbjN M001_008780 IPR034137 RecR, TOPRIM domain M001_008780 IPR023627 Recombination protein RecR M001_008780 IPR023628 Recombination protein RecR, C4-type zinc finger M001_008780 IPR000093 DNA recombination protein RecR M001_008780 IPR006171 TOPRIM domain M001_008785 IPR020568 Ribosomal protein S5 domain 2-type fold M001_008785 IPR001404 Heat shock protein Hsp90 family M001_008785 IPR020575 Heat shock protein Hsp90, N-terminal M001_008785 IPR019805 Heat shock protein Hsp90, conserved site M001_008785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_008785 IPR003594 Histidine kinase/HSP90-like ATPase M001_008785 IPR037196 HSP90, C-terminal domain M001_008790 IPR017871 ABC transporter, conserved site M001_008790 IPR003439 ABC transporter-like M001_008790 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008790 IPR003593 AAA+ ATPase domain M001_008795 IPR003439 ABC transporter-like M001_008795 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008795 IPR003593 AAA+ ATPase domain M001_008795 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M001_008800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_008800 IPR035906 MetI-like superfamily M001_008800 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M001_008805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_008805 IPR035906 MetI-like superfamily M001_008810 IPR000914 Solute-binding protein family 5 domain M001_008810 IPR039424 Solute-binding protein family 5 M001_008810 IPR030678 Peptide/nickel binding protein, MppA-type M001_008810 IPR023765 Solute-binding protein family 5, conserved site M001_008815 IPR025944 Sigma-54 interaction domain, conserved site M001_008815 IPR014317 Transcription activator PspF M001_008815 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_008815 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_008815 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008815 IPR002197 DNA binding HTH domain, Fis-type M001_008815 IPR003593 AAA+ ATPase domain M001_008815 IPR009057 Homeobox-like domain superfamily M001_008820 IPR007157 PspA/IM30 M001_008820 IPR014319 Phage shock protein, PspA M001_008825 IPR009554 Phage shock protein B M001_008835 IPR007413 Protein of unknown function DUF463, YcjX-like protein M001_008840 IPR021147 Protein of unknown function DUF697 M001_008840 IPR006507 Uncharacterised protein family UPF0283 M001_008845 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site M001_008845 IPR005960 Phenylalanine-4-hydroxylase, monomeric form M001_008845 IPR019774 Aromatic amino acid hydroxylase, C-terminal M001_008845 IPR001273 Aromatic amino acid hydroxylase M001_008845 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily M001_008845 IPR036951 Aromatic amino acid hydroxylase superfamily M001_008850 IPR001533 Pterin 4 alpha carbinolamine dehydratase M001_008850 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily M001_008855 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_008855 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_008855 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_008855 IPR035965 PAS domain superfamily M001_008855 IPR000014 PAS domain M001_008855 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_008855 IPR009057 Homeobox-like domain superfamily M001_008855 IPR002912 ACT domain M001_008855 IPR025944 Sigma-54 interaction domain, conserved site M001_008855 IPR003593 AAA+ ATPase domain M001_008855 IPR030828 TyrR family, helix-turn-helix domain M001_008865 IPR033417 Periplasmic sensor domain CHASE8 M001_008865 IPR000160 GGDEF domain M001_008865 IPR029787 Nucleotide cyclase M001_008865 IPR003660 HAMP domain M001_008870 IPR036737 OmpA-like domain superfamily M001_008870 IPR006664 Outer membrane protein, bacterial M001_008870 IPR006665 OmpA-like domain M001_008875 IPR005496 Integral membrane protein TerC M001_008885 IPR014987 Uncharacterised protein family YfcL M001_008890 IPR042099 AMP-dependent synthetase-like superfamily M001_008890 IPR000873 AMP-dependent synthetase/ligase M001_008890 IPR020845 AMP-binding, conserved site M001_008895 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme M001_008895 IPR006237 L-methionine gamma-lyase M001_008895 IPR015424 Pyridoxal phosphate-dependent transferase M001_008895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_008895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_008905 IPR036291 NAD(P)-binding domain superfamily M001_008905 IPR016040 NAD(P)-binding domain M001_008910 IPR000847 Transcription regulator HTH, LysR M001_008910 IPR036390 Winged helix DNA-binding domain superfamily M001_008910 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008910 IPR005119 LysR, substrate-binding M001_008915 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008915 IPR036390 Winged helix DNA-binding domain superfamily M001_008915 IPR005119 LysR, substrate-binding M001_008915 IPR000847 Transcription regulator HTH, LysR M001_008920 IPR000849 Sugar phosphate transporter M001_008920 IPR036259 MFS transporter superfamily M001_008920 IPR011701 Major facilitator superfamily M001_008920 IPR020846 Major facilitator superfamily domain M001_008925 IPR012093 Pirin M001_008925 IPR008778 Pirin, C-terminal domain M001_008925 IPR003829 Pirin, N-terminal domain M001_008925 IPR014710 RmlC-like jelly roll fold M001_008925 IPR011051 RmlC-like cupin domain superfamily M001_008930 IPR000868 Isochorismatase-like M001_008930 IPR036380 Isochorismatase-like superfamily M001_008935 IPR036390 Winged helix DNA-binding domain superfamily M001_008935 IPR005119 LysR, substrate-binding M001_008935 IPR000847 Transcription regulator HTH, LysR M001_008935 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008940 IPR036390 Winged helix DNA-binding domain superfamily M001_008940 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008940 IPR000847 Transcription regulator HTH, LysR M001_008940 IPR005119 LysR, substrate-binding M001_008940 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain M001_008945 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal M001_008945 IPR038071 UROD/MetE-like superfamily M001_008945 IPR006276 Cobalamin-independent methionine synthase M001_008945 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal M001_008955 IPR036388 Winged helix-like DNA-binding domain superfamily M001_008955 IPR000847 Transcription regulator HTH, LysR M001_008955 IPR005119 LysR, substrate-binding M001_008955 IPR036390 Winged helix DNA-binding domain superfamily M001_008960 IPR017853 Glycoside hydrolase superfamily M001_008960 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site M001_008960 IPR018120 Glycoside hydrolase family 1, active site M001_008960 IPR001360 Glycoside hydrolase family 1 M001_008965 IPR041080 YcaO cyclodehydratase, C-terminal M001_008965 IPR003776 YcaO-like domain M001_008970 IPR024002 Formate/nitrite transporter, conserved site M001_008970 IPR023271 Aquaporin-like M001_008970 IPR023999 Formate transporter FocA, putative M001_008970 IPR000292 Formate/nitrite transporter M001_008975 IPR005949 Formate acetyltransferase M001_008975 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M001_008975 IPR004184 Pyruvate formate lyase domain M001_008975 IPR001150 Glycine radical domain M001_008980 IPR005358 Putative zinc- or iron-chelating domain containing protein M001_008980 IPR008228 Uncharacterised conserved protein UCP006173 M001_008995 IPR000811 Glycosyl transferase, family 35 M001_008995 IPR035090 Phosphorylase pyridoxal-phosphate attachment site M001_008995 IPR011833 Glycogen/starch/alpha-glucan phosphorylase M001_009000 IPR031312 Sodium/sulphate symporter, conserved site M001_009000 IPR001898 Solute carrier family 13 M001_009005 IPR013766 Thioredoxin domain M001_009005 IPR017937 Thioredoxin, conserved site M001_009005 IPR036249 Thioredoxin-like superfamily M001_009005 IPR005746 Thioredoxin M001_009010 IPR036641 HPT domain superfamily M001_009010 IPR019247 Histidine kinase BarA, N-terminal M001_009010 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_009010 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_009010 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_009010 IPR003594 Histidine kinase/HSP90-like ATPase M001_009010 IPR003660 HAMP domain M001_009010 IPR011006 CheY-like superfamily M001_009010 IPR005467 Histidine kinase domain M001_009010 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_009010 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_009010 IPR001789 Signal transduction response regulator, receiver domain M001_009015 IPR003593 AAA+ ATPase domain M001_009015 IPR039421 Type I protein exporter M001_009015 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009015 IPR017871 ABC transporter, conserved site M001_009015 IPR003439 ABC transporter-like M001_009015 IPR036640 ABC transporter type 1, transmembrane domain superfamily M001_009015 IPR011527 ABC transporter type 1, transmembrane domain M001_009020 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009020 IPR017871 ABC transporter, conserved site M001_009020 IPR003439 ABC transporter-like M001_009020 IPR003593 AAA+ ATPase domain M001_009020 IPR011527 ABC transporter type 1, transmembrane domain M001_009020 IPR036640 ABC transporter type 1, transmembrane domain superfamily M001_009020 IPR039421 Type I protein exporter M001_009030 IPR036986 RNA-binding S4 domain superfamily M001_009030 IPR002942 RNA-binding S4 domain M001_009045 IPR004625 Pyridoxine kinase M001_009045 IPR029056 Ribokinase-like M001_009045 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase M001_009045 IPR023685 Pyridoxal kinase PdxY M001_009050 IPR012337 Ribonuclease H-like superfamily M001_009050 IPR002559 Transposase, IS4-like M001_009050 IPR024473 Transposase, IS4, N-terminal M001_009055 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M001_009055 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M001_009055 IPR016205 Glycerol dehydrogenase M001_009070 IPR000182 GNAT domain M001_009070 IPR016181 Acyl-CoA N-acyltransferase M001_009080 IPR016142 Citrate synthase-like, large alpha subdomain M001_009080 IPR036969 Citrate synthase superfamily M001_009080 IPR024176 Citrate synthase, bacterial-type M001_009080 IPR010953 Citrate synthase, type I M001_009080 IPR016143 Citrate synthase-like, small alpha subdomain M001_009080 IPR002020 Citrate synthase M001_009080 IPR019810 Citrate synthase active site M001_009085 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit M001_009085 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit M001_009085 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site M001_009085 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit M001_009090 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit M001_009090 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor M001_009090 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit M001_009095 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site M001_009095 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily M001_009095 IPR036188 FAD/NAD(P)-binding domain superfamily M001_009095 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal M001_009095 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily M001_009095 IPR011281 Succinate dehydrogenase, flavoprotein subunit M001_009095 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit M001_009095 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain M001_009100 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal M001_009100 IPR036010 2Fe-2S ferredoxin-like superfamily M001_009100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_009100 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_009100 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_009100 IPR009051 Alpha-helical ferredoxin M001_009100 IPR012675 Beta-grasp domain superfamily M001_009100 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein M001_009105 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain M001_009105 IPR011603 2-oxoglutarate dehydrogenase E1 component M001_009105 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal M001_009105 IPR001017 Dehydrogenase, E1 component M001_009105 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily M001_009105 IPR029061 Thiamin diphosphate-binding fold M001_009105 IPR005475 Transketolase-like, pyrimidine-binding domain M001_009110 IPR006255 Dihydrolipoamide succinyltransferase M001_009110 IPR011053 Single hybrid motif M001_009110 IPR004167 Peripheral subunit-binding domain M001_009110 IPR036625 E3-binding domain superfamily M001_009110 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M001_009110 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain M001_009110 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M001_009110 IPR000089 Biotin/lipoyl attachment M001_009115 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type M001_009115 IPR013815 ATP-grasp fold, subdomain 1 M001_009115 IPR005809 Succinate--CoA synthetase, beta subunit M001_009115 IPR016102 Succinyl-CoA synthetase-like M001_009115 IPR005811 ATP-citrate lyase/succinyl-CoA ligase M001_009115 IPR011761 ATP-grasp fold M001_009115 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site M001_009120 IPR005811 ATP-citrate lyase/succinyl-CoA ligase M001_009120 IPR005810 Succinyl-CoA ligase, alpha subunit M001_009120 IPR003781 CoA-binding M001_009120 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site M001_009120 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site M001_009120 IPR016102 Succinyl-CoA synthetase-like M001_009120 IPR036291 NAD(P)-binding domain superfamily M001_009130 IPR036188 FAD/NAD(P)-binding domain superfamily M001_009130 IPR006076 FAD dependent oxidoreductase M001_009135 IPR035906 MetI-like superfamily M001_009135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_009140 IPR008995 Molybdate/tungstate binding, C-terminal M001_009140 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 M001_009140 IPR015853 ABC transporter, ferric cation import, FbpC M001_009140 IPR017871 ABC transporter, conserved site M001_009140 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009140 IPR003593 AAA+ ATPase domain M001_009140 IPR003439 ABC transporter-like M001_009145 IPR026045 Ferric binding protein M001_009150 IPR036390 Winged helix DNA-binding domain superfamily M001_009150 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M001_009150 IPR000524 Transcription regulator HTH, GntR M001_009150 IPR017722 Phosphonate utilization transcriptional regulator PhnR M001_009150 IPR011663 UbiC transcription regulator-associated M001_009150 IPR036388 Winged helix-like DNA-binding domain superfamily M001_009155 IPR012703 2-aminoethylphosphonate--pyruvate transaminase M001_009155 IPR000192 Aminotransferase class V domain M001_009155 IPR015424 Pyridoxal phosphate-dependent transferase M001_009155 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase M001_009155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_009155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_009160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_009160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_009160 IPR015424 Pyridoxal phosphate-dependent transferase M001_009160 IPR005814 Aminotransferase class-III M001_009160 IPR004632 4-aminobutyrate aminotransferase, bacterial M001_009165 IPR036412 HAD-like superfamily M001_009165 IPR006323 Phosphonoacetaldehyde hydrolase M001_009165 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_009165 IPR006439 HAD hydrolase, subfamily IA M001_009165 IPR023214 HAD superfamily M001_009180 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF M001_009180 IPR013026 Tetratricopeptide repeat-containing domain M001_009180 IPR011990 Tetratricopeptide-like helical domain superfamily M001_009180 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M001_009180 IPR005616 CcmH/CycL/Ccl2/NrfF family M001_009180 IPR019734 Tetratricopeptide repeat M001_009185 IPR036249 Thioredoxin-like superfamily M001_009185 IPR013766 Thioredoxin domain M001_009185 IPR013740 Redoxin M001_009185 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE M001_009185 IPR017937 Thioredoxin, conserved site M001_009190 IPR003568 Cytochrome c-type biogenesis protein CcmF M001_009190 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal M001_009190 IPR002541 Cytochrome c assembly protein M001_009190 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE M001_009190 IPR003570 Cytochrome c-type biogenesis protein NrfE M001_009190 IPR003567 Cytochrome c-type biogenesis protein M001_009195 IPR017566 NrfD M001_009195 IPR005614 NrfD family M001_009200 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_009200 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_009200 IPR017567 Cytochrome c nitrite reductase, Fe-S protein M001_009200 IPR006311 Twin-arginine translocation pathway, signal sequence M001_009200 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M001_009205 IPR010177 Doubled CXXCH motif M001_009205 IPR011031 Multihaem cytochrome M001_009205 IPR023155 Cytochrome c-552/4 M001_009205 IPR036280 Multiheme cytochrome superfamily M001_009205 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit M001_009210 IPR003321 Cytochrome c552 M001_009210 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit M001_009210 IPR036280 Multiheme cytochrome superfamily M001_009210 IPR011031 Multihaem cytochrome M001_009220 IPR009051 Alpha-helical ferredoxin M001_009220 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit M001_009220 IPR004017 Cysteine-rich domain M001_009220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_009220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_009225 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit M001_009225 IPR036188 FAD/NAD(P)-binding domain superfamily M001_009225 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain M001_009230 IPR006076 FAD dependent oxidoreductase M001_009230 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit M001_009230 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase M001_009230 IPR007419 BFD-like [2Fe-2S]-binding domain M001_009230 IPR036188 FAD/NAD(P)-binding domain superfamily M001_009230 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily M001_009235 IPR032710 NTF2-like domain superfamily M001_009235 IPR023006 Uncharacterised protein family UPF0225 M001_009235 IPR004027 SEC-C motif M001_009240 IPR003660 HAMP domain M001_009240 IPR004090 Chemotaxis methyl-accepting receptor M001_009240 IPR033480 Single Cache domain 2 M001_009240 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_009245 IPR036390 Winged helix DNA-binding domain superfamily M001_009245 IPR036388 Winged helix-like DNA-binding domain superfamily M001_009245 IPR000600 ROK family M001_009245 IPR000835 MarR-type HTH domain M001_009255 IPR002781 Transmembrane protein TauE-like M001_009260 IPR005119 LysR, substrate-binding M001_009260 IPR036390 Winged helix DNA-binding domain superfamily M001_009260 IPR036388 Winged helix-like DNA-binding domain superfamily M001_009260 IPR000847 Transcription regulator HTH, LysR M001_009265 IPR000620 EamA domain M001_009270 IPR018060 DNA binding HTH domain, AraC-type M001_009270 IPR009057 Homeobox-like domain superfamily M001_009270 IPR018062 HTH domain AraC-type, conserved site M001_009270 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like M001_009275 IPR006171 TOPRIM domain M001_009275 IPR022602 Protein of unknown function DUF2813 M001_009275 IPR034139 OLD protein-like, TOPRIM domain M001_009275 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009285 IPR013783 Immunoglobulin-like fold M001_009285 IPR017853 Glycoside hydrolase superfamily M001_009285 IPR011837 Glycogen debranching enzyme, GlgX type M001_009285 IPR013780 Glycosyl hydrolase, all-beta M001_009285 IPR004193 Glycoside hydrolase, family 13, N-terminal M001_009285 IPR014756 Immunoglobulin E-set M001_009285 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_009325 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B M001_009325 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal M001_009325 IPR023042 Peptidase M17, leucine aminopeptidase M001_009325 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal M001_009330 IPR041492 Haloacid dehalogenase-like hydrolase M001_009330 IPR006439 HAD hydrolase, subfamily IA M001_009330 IPR036412 HAD-like superfamily M001_009330 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_009330 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB M001_009330 IPR023214 HAD superfamily M001_009345 IPR001269 tRNA-dihydrouridine synthase M001_009345 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal M001_009345 IPR032886 tRNA-dihydrouridine(16) synthase M001_009345 IPR035587 DUS-like, FMN-binding domain M001_009345 IPR013785 Aldolase-type TIM barrel M001_009350 IPR007401 Protein of unknown function DUF454 M001_009355 IPR029057 Phosphoribosyltransferase-like M001_009355 IPR000836 Phosphoribosyltransferase domain M001_009355 IPR005764 Adenine phosphoribosyl transferase M001_009360 IPR012763 DNA polymerase III, subunit gamma/ tau M001_009360 IPR003593 AAA+ ATPase domain M001_009360 IPR021029 DNA polymerase III, tau subunit, domain V M001_009360 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal M001_009360 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV M001_009360 IPR022754 DNA polymerase III, gamma subunit, domain III M001_009360 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily M001_009360 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009360 IPR001270 ClpA/B family M001_009365 IPR004401 Nucleoid-associated protein YbaB/EbfC family M001_009365 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily M001_009370 IPR013022 Xylose isomerase-like, TIM barrel domain M001_009370 IPR036237 Xylose isomerase-like superfamily M001_009370 IPR001719 AP endonuclease 2 M001_009370 IPR018246 AP endonuclease 2, zinc binding site M001_009375 IPR036390 Winged helix DNA-binding domain superfamily M001_009375 IPR036388 Winged helix-like DNA-binding domain superfamily M001_009375 IPR000847 Transcription regulator HTH, LysR M001_009375 IPR005119 LysR, substrate-binding M001_009385 IPR011921 Lipid A biosynthesis myristoyltransferase M001_009385 IPR004960 Bacterial lipid A biosynthesis acyltransferase M001_009395 IPR004960 Bacterial lipid A biosynthesis acyltransferase M001_009395 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase M001_009395 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP M001_009410 IPR000160 GGDEF domain M001_009410 IPR033416 Periplasmic sensor domain CHASE7 M001_009410 IPR029787 Nucleotide cyclase M001_009420 IPR036397 Ribonuclease H superfamily M001_009420 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain M001_009420 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain M001_009420 IPR017964 DNA-directed DNA polymerase, family B, conserved site M001_009420 IPR006172 DNA-directed DNA polymerase, family B M001_009420 IPR012337 Ribonuclease H-like superfamily M001_009420 IPR023211 DNA polymerase, palm domain superfamily M001_009420 IPR042087 DNA polymerase family B, C-terminal domain M001_009435 IPR002725 Protein of unknown function DUF45 M001_009450 IPR018385 C4-dicarboxylate anaerobic carrier-like M001_009450 IPR004669 C4-dicarboxylate anaerobic carrier M001_009465 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal M001_009465 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC M001_009465 IPR008471 MnmC-like methyltransferase M001_009465 IPR036188 FAD/NAD(P)-binding domain superfamily M001_009465 IPR006076 FAD dependent oxidoreductase M001_009470 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M001_009470 IPR014031 Beta-ketoacyl synthase, C-terminal M001_009470 IPR018201 Beta-ketoacyl synthase, active site M001_009470 IPR000794 Beta-ketoacyl synthase M001_009470 IPR016039 Thiolase-like M001_009470 IPR014030 Beta-ketoacyl synthase, N-terminal M001_009480 IPR006512 YidE/YbjL duplication M001_009480 IPR023017 Transport protein YbjL, putative M001_009480 IPR006037 Regulator of K+ conductance, C-terminal M001_009480 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M001_009495 IPR001650 Helicase, C-terminal M001_009495 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_009495 IPR006935 Helicase/UvrB, N-terminal M001_009495 IPR036876 UVR domain superfamily M001_009495 IPR004807 UvrABC system, subunit B M001_009495 IPR041471 UvrB, interaction domain M001_009495 IPR024759 UvrB, YAD/RRR-motif-containing domain M001_009495 IPR001943 UVR domain M001_009495 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009505 IPR032816 SNARE associated Golgi protein M001_009505 IPR032818 DedA family M001_009510 IPR022920 Disulphide bond formation protein DsbB M001_009510 IPR023380 DsbB-like superfamily M001_009510 IPR003752 Disulphide bond formation protein DsbB/BdbC M001_009515 IPR004671 Na+/H+ antiporter NhaB M001_009520 IPR014178 Fatty acid response transcription factor FadR M001_009520 IPR028374 FadR, C-terminal domain M001_009520 IPR008920 Transcription regulator FadR/GntR, C-terminal M001_009520 IPR036390 Winged helix DNA-binding domain superfamily M001_009520 IPR036388 Winged helix-like DNA-binding domain superfamily M001_009520 IPR000524 Transcription regulator HTH, GntR M001_009530 IPR038590 YaeQ superfamily M001_009530 IPR009822 YaeQ M001_009530 IPR011335 Restriction endonuclease type II-like M001_009600 IPR022913 Multidrug resistance protein MdtK M001_009600 IPR002528 Multi antimicrobial extrusion protein M001_009605 IPR009624 Uncharacterised protein family UPF0253 M001_009615 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M001_009615 IPR001783 Lumazine-binding protein M001_009615 IPR026017 Lumazine-binding domain M001_009615 IPR017938 Riboflavin synthase-like beta-barrel M001_009625 IPR023214 HAD superfamily M001_009625 IPR041492 Haloacid dehalogenase-like hydrolase M001_009625 IPR006439 HAD hydrolase, subfamily IA M001_009625 IPR036412 HAD-like superfamily M001_009625 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_009630 IPR016185 Pre-ATP-grasp domain superfamily M001_009630 IPR001509 NAD-dependent epimerase/dehydratase M001_009630 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase M001_009630 IPR011054 Rudiment single hybrid motif M001_009630 IPR011761 ATP-grasp fold M001_009630 IPR013815 ATP-grasp fold, subdomain 1 M001_009630 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M001_009635 IPR000620 EamA domain M001_009640 IPR003680 Flavodoxin-like fold M001_009640 IPR023048 NADH-azoreductase, FMN-dependent M001_009640 IPR029039 Flavoprotein-like superfamily M001_009665 IPR014464 Conserved virulence factor B M001_009665 IPR039566 Conserved virulence factor B, S1 domain M001_009665 IPR040764 Conserved virulence factor B-like, winged helix domain M001_009665 IPR036388 Winged helix-like DNA-binding domain superfamily M001_009675 IPR036763 Putative dsDNA mimic superfamily M001_009675 IPR007376 dsDNA mimic, putative M001_009680 IPR001264 Glycosyl transferase, family 51 M001_009680 IPR023346 Lysozyme-like domain superfamily M001_009680 IPR036950 Penicillin binding protein transglycosylase domain M001_009680 IPR011812 Biosynthetic peptidoglycan transglycosylase M001_009685 IPR007376 dsDNA mimic, putative M001_009685 IPR036763 Putative dsDNA mimic superfamily M001_009690 IPR036707 Cell division topological specificity factor MinE superfamily M001_009690 IPR005527 Cell division topological specificity factor MinE M001_009695 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain M001_009695 IPR010223 ATP binding protein MinD, bacterial-type M001_009695 IPR025501 ATP binding protein MinD M001_009695 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009700 IPR005526 Septum formation inhibitor MinC, C-terminal M001_009700 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily M001_009700 IPR007874 Septum formation inhibitor MinC, N-terminal M001_009700 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily M001_009700 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal M001_009700 IPR013033 Septum formation inhibitor MinC M001_009705 IPR027354 YcgL domain M001_009705 IPR038068 YcgL-like superfamily M001_009710 IPR005131 Serine dehydratase beta chain M001_009710 IPR005130 Serine dehydratase-like, alpha subunit M001_009710 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form M001_009710 IPR029009 Allosteric substrate binding domain superfamily M001_009715 IPR029009 Allosteric substrate binding domain superfamily M001_009715 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form M001_009715 IPR005130 Serine dehydratase-like, alpha subunit M001_009715 IPR005131 Serine dehydratase beta chain M001_009720 IPR011051 RmlC-like cupin domain superfamily M001_009720 IPR009664 Pyrimidine/purine nucleoside phosphorylase M001_009720 IPR014710 RmlC-like jelly roll fold M001_009725 IPR036458 Sodium:dicarboxylate symporter superfamily M001_009725 IPR001991 Sodium:dicarboxylate symporter M001_009725 IPR018107 Sodium:dicarboxylate symporter, conserved site M001_009725 IPR023954 C4-dicarboxylate transport protein M001_009730 IPR035966 Phosphofructokinase superfamily M001_009730 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type M001_009730 IPR000023 Phosphofructokinase domain M001_009730 IPR015912 Phosphofructokinase, conserved site M001_009730 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic M001_009730 IPR022953 ATP-dependent 6-phosphofructokinase M001_009735 IPR013785 Aldolase-type TIM barrel M001_009735 IPR020861 Triosephosphate isomerase, active site M001_009735 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic M001_009735 IPR000652 Triosephosphate isomerase M001_009735 IPR035990 Triosephosphate isomerase superfamily M001_009740 IPR003848 Domain of unknown function DUF218 M001_009745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_009745 IPR025714 Methyltransferase domain M001_009745 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase M001_009750 IPR033439 Chromosome partition protein MukF, winged-helix domain M001_009750 IPR036390 Winged helix DNA-binding domain superfamily M001_009750 IPR033440 Chromosome partition protein MukF, middle domain M001_009750 IPR038198 MukF, C-terminal domain superfamily M001_009750 IPR033441 Chromosome partition protein MukF, C-terminal domain M001_009750 IPR005582 Chromosome partition protein MukF M001_009750 IPR036141 MukF, middle domain superfamily M001_009750 IPR036388 Winged helix-like DNA-binding domain superfamily M001_009755 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE M001_009755 IPR042038 MukE, N-terminal domain M001_009755 IPR042037 MukE, C-terminal domain M001_009760 IPR012090 Chromosome partition protein MukB M001_009760 IPR032520 MukB, hinge domain M001_009760 IPR007406 MukB, N-terminal domain M001_009760 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009765 IPR012997 Rare lipoprotein A M001_009765 IPR009009 RlpA-like protein, double-psi beta-barrel domain M001_009765 IPR034718 Endolytic peptidoglycan transglycosylase RlpA M001_009765 IPR036908 RlpA-like domain superfamily M001_009765 IPR036680 Sporulation-like domain superfamily M001_009765 IPR007730 Sporulation-like domain M001_009785 IPR023635 Peptide deformylase M001_009785 IPR036821 Peptide deformylase superfamily M001_009815 IPR006130 Aspartate/ornithine carbamoyltransferase M001_009815 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M001_009815 IPR017702 Putative carbamoyltransferase YgeW M001_009815 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M001_009815 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M001_009820 IPR001926 Pyridoxal-phosphate dependent enzyme M001_009820 IPR010081 Diaminopropionate ammonia-lyase M001_009820 IPR019871 Diaminopropionate ammonia-lyase, subgroup M001_009820 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M001_009825 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M001_009825 IPR036264 Bacterial exopeptidase dimerisation domain M001_009825 IPR002933 Peptidase M20 M001_009825 IPR017706 Peptidase M20/DapE, YgeY M001_009825 IPR011650 Peptidase M20, dimerisation domain M001_009830 IPR006680 Amidohydrolase-related M001_009830 IPR023766 D-phenylhydantoinase M001_009830 IPR011778 Hydantoinase/dihydropyrimidinase M001_009830 IPR032466 Metal-dependent hydrolase M001_009830 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_009835 IPR001048 Aspartate/glutamate/uridylate kinase M001_009835 IPR036393 Acetylglutamate kinase-like superfamily M001_009835 IPR003964 Carbamate kinase M001_009840 IPR036259 MFS transporter superfamily M001_009840 IPR020846 Major facilitator superfamily domain M001_009840 IPR011701 Major facilitator superfamily M001_009845 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_009845 IPR015863 ABC transporter, hemin import, HmuV M001_009845 IPR003439 ABC transporter-like M001_009845 IPR003593 AAA+ ATPase domain M001_009850 IPR037294 ABC transporter, BtuC-like M001_009850 IPR000522 ABC transporter, permease protein, BtuC-like M001_009860 IPR000620 EamA domain M001_009865 IPR004837 Sodium/calcium exchanger membrane region M001_009865 IPR004481 Sodium/potassium/calcium exchanger M001_009870 IPR027051 XdhC Rossmann domain M001_009870 IPR003777 XdhC- CoxI M001_009870 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family M001_009875 IPR036565 Mur-like, catalytic domain superfamily M001_009875 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC M001_009880 IPR017696 Molybdenum cofactor cytidylyltransferase M001_009880 IPR025877 MobA-like NTP transferase M001_009880 IPR029044 Nucleotide-diphospho-sugar transferases M001_009885 IPR017701 Putative selenate reductase YgfK M001_009885 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_009885 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_009885 IPR023753 FAD/NAD(P)-binding domain M001_009885 IPR009051 Alpha-helical ferredoxin M001_009885 IPR028261 Dihydroprymidine dehydrogenase domain II M001_009885 IPR036188 FAD/NAD(P)-binding domain superfamily M001_009890 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_009890 IPR032466 Metal-dependent hydrolase M001_009890 IPR017700 Putative aminohydrolase SsnA M001_009890 IPR006680 Amidohydrolase-related M001_009895 IPR016166 FAD-binding domain, PCMH-type M001_009895 IPR002346 Molybdopterin dehydrogenase, FAD-binding M001_009895 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_009895 IPR005107 CO dehydrogenase flavoprotein, C-terminal M001_009895 IPR017698 Probable selenate reductase, FAD-binding subunit M001_009895 IPR036318 FAD-binding, type PCMH-like superfamily M001_009895 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily M001_009900 IPR012675 Beta-grasp domain superfamily M001_009900 IPR017699 Molybdenum-binding protein YgfN/XdhD M001_009900 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding M001_009900 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily M001_009900 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead M001_009900 IPR036884 [2Fe-2S]-binding domain superfamily M001_009900 IPR002888 [2Fe-2S]-binding M001_009900 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily M001_009900 IPR016208 Aldehyde oxidase/xanthine dehydrogenase M001_009905 IPR006042 Xanthine/uracil permease M001_009905 IPR006043 Xanthine/uracil/vitamin C permease M001_009910 IPR014311 Guanine deaminase M001_009910 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_009910 IPR032466 Metal-dependent hydrolase M001_009910 IPR006680 Amidohydrolase-related M001_009915 IPR006043 Xanthine/uracil/vitamin C permease M001_009920 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily M001_009920 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding M001_009920 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily M001_009920 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead M001_009925 IPR036318 FAD-binding, type PCMH-like superfamily M001_009925 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_009925 IPR002346 Molybdopterin dehydrogenase, FAD-binding M001_009925 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily M001_009925 IPR005107 CO dehydrogenase flavoprotein, C-terminal M001_009925 IPR016166 FAD-binding domain, PCMH-type M001_009930 IPR002888 [2Fe-2S]-binding M001_009930 IPR036884 [2Fe-2S]-binding domain superfamily M001_009930 IPR036010 2Fe-2S ferredoxin-like superfamily M001_009930 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_009930 IPR012675 Beta-grasp domain superfamily M001_009935 IPR008816 Glycine zipper 2TM domain M001_009945 IPR018385 C4-dicarboxylate anaerobic carrier-like M001_009950 IPR025110 AMP-binding enzyme, C-terminal domain M001_009950 IPR042099 AMP-dependent synthetase-like superfamily M001_009950 IPR020845 AMP-binding, conserved site M001_009950 IPR000873 AMP-dependent synthetase/ligase M001_009955 IPR029787 Nucleotide cyclase M001_009955 IPR000160 GGDEF domain M001_009955 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region M001_009965 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like M001_009965 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily M001_009965 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain M001_009965 IPR023019 Histidine biosynthesis bifunctional protein HisIE M001_009965 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase M001_009970 IPR013785 Aldolase-type TIM barrel M001_009970 IPR006062 Histidine biosynthesis M001_009970 IPR004651 Histidine biosynthesis, HisF M001_009970 IPR011060 Ribulose-phosphate binding barrel M001_009975 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase M001_009975 IPR011060 Ribulose-phosphate binding barrel M001_009975 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA M001_009975 IPR006062 Histidine biosynthesis M001_009975 IPR013785 Aldolase-type TIM barrel M001_009980 IPR010139 Imidazole glycerol phosphate synthase, subunit H M001_009980 IPR017926 Glutamine amidotransferase M001_009980 IPR029062 Class I glutamine amidotransferase-like M001_009985 IPR020566 Histidine biosynthesis bifunctional protein HisB M001_009985 IPR020568 Ribosomal protein S5 domain 2-type fold M001_009985 IPR013954 Polynucleotide kinase 3 phosphatase M001_009985 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site M001_009985 IPR000807 Imidazoleglycerol-phosphate dehydratase M001_009985 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily M001_009985 IPR006543 Histidinol-phosphate phosphatase M001_009985 IPR005954 Histidinol-phosphatase M001_009985 IPR023214 HAD superfamily M001_009985 IPR036412 HAD-like superfamily M001_009985 IPR006549 HAD-superfamily hydrolase,subfamily IIIA M001_009990 IPR004839 Aminotransferase, class I/classII M001_009990 IPR015424 Pyridoxal phosphate-dependent transferase M001_009990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_009990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_009990 IPR005861 Histidinol-phosphate aminotransferase family M001_009990 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site M001_009995 IPR022695 Histidinol dehydrogenase, monofunctional M001_009995 IPR001692 Histidinol dehydrogenase, conserved site M001_009995 IPR016161 Aldehyde/histidinol dehydrogenase M001_009995 IPR012131 Histidinol dehydrogenase M001_010000 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M001_010000 IPR001348 ATP phosphoribosyltransferase HisG M001_010000 IPR020621 ATP phosphoribosyltransferase HisG, long form M001_010000 IPR013115 Histidine biosynthesis HisG, C-terminal M001_010000 IPR011322 Nitrogen regulatory PII-like, alpha/beta M001_010000 IPR013820 ATP phosphoribosyltransferase, catalytic domain M001_010000 IPR018198 ATP phosphoribosyltransferase, conserved site M001_010010 IPR006555 ATP-dependent helicase, C-terminal M001_010010 IPR006935 Helicase/UvrB, N-terminal M001_010010 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_010010 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010010 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type M001_010015 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB M001_010015 IPR000905 Gcp-like domain M001_010025 IPR000073 Alpha/beta hydrolase fold-1 M001_010025 IPR029058 Alpha/Beta hydrolase fold M001_010030 IPR042099 AMP-dependent synthetase-like superfamily M001_010030 IPR025110 AMP-binding enzyme, C-terminal domain M001_010030 IPR000873 AMP-dependent synthetase/ligase M001_010030 IPR020845 AMP-binding, conserved site M001_010035 IPR036397 Ribonuclease H superfamily M001_010035 IPR012337 Ribonuclease H-like superfamily M001_010035 IPR002562 3'-5' exonuclease domain M001_010035 IPR010997 HRDC-like superfamily M001_010035 IPR002121 HRDC domain M001_010035 IPR006292 Ribonuclease D M001_010040 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M001_010040 IPR001279 Metallo-beta-lactamase M001_010045 IPR036873 Rhodanese-like domain superfamily M001_010045 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase M001_010045 IPR001763 Rhodanese-like domain M001_010050 IPR004536 Selenophosphate synthetase M001_010050 IPR023061 Selenophosphate synthetase, class I M001_010050 IPR036921 PurM-like, N-terminal domain superfamily M001_010050 IPR016188 PurM-like, N-terminal domain M001_010050 IPR036676 PurM-like, C-terminal domain superfamily M001_010050 IPR010918 PurM-like, C-terminal domain M001_010060 IPR023542 rRNA large subunit methyltransferase I M001_010060 IPR041532 RlmI, PUA-like domain M001_010060 IPR015947 PUA-like superfamily M001_010060 IPR019614 S-adenosylmethionine-dependent methyltransferase M001_010060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_010060 IPR002478 PUA domain M001_010060 IPR036974 PUA domain superfamily M001_010065 IPR000727 Target SNARE coiled-coil homology domain M001_010065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_010065 IPR003660 HAMP domain M001_010065 IPR004090 Chemotaxis methyl-accepting receptor M001_010065 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M001_010070 IPR020456 Acylphosphatase M001_010070 IPR001792 Acylphosphatase-like domain M001_010070 IPR036046 Acylphosphatase-like domain superfamily M001_010070 IPR017968 Acylphosphatase, conserved site M001_010080 IPR012337 Ribonuclease H-like superfamily M001_010080 IPR002559 Transposase, IS4-like M001_010080 IPR024473 Transposase, IS4, N-terminal M001_010085 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_010085 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain M001_010085 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M001_010085 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal M001_010085 IPR029038 Methionyl-tRNA synthetase, Zn-domain M001_010085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_010085 IPR015413 Methionyl/Leucyl tRNA synthetase M001_010085 IPR033911 Methioninyl-tRNA synthetase core domain M001_010085 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M001_010085 IPR002547 tRNA-binding domain M001_010085 IPR023458 Methionine-tRNA ligase, type 1 M001_010085 IPR014758 Methionyl-tRNA synthetase M001_010085 IPR012340 Nucleic acid-binding, OB-fold M001_010090 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M001_010090 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010090 IPR000808 Mrp, conserved site M001_010090 IPR019591 Mrp/NBP35 ATP-binding protein M001_010090 IPR034904 Fe-S cluster assembly domain superfamily M001_010095 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010095 IPR000764 Uridine kinase-like M001_010095 IPR026008 Uridine kinase M001_010095 IPR006083 Phosphoribulokinase/uridine kinase M001_010100 IPR011962 dCTP deaminase M001_010100 IPR033704 dUTPase, trimeric M001_010100 IPR029054 dUTPase-like M001_010100 IPR036157 dUTPase-like superfamily M001_010105 IPR001204 Phosphate transporter M001_010110 IPR010710 Protein of unknown function DUF1289 M001_010115 IPR036908 RlpA-like domain superfamily M001_010115 IPR026044 Membrane-bound lytic murein transglycosylase A M001_010115 IPR034654 MltA, 3D domain M001_010115 IPR005300 Lytic transglycosylase MltA, domain B M001_010115 IPR010611 3D domain M001_010120 IPR012675 Beta-grasp domain superfamily M001_010120 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site M001_010120 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_010120 IPR036010 2Fe-2S ferredoxin-like superfamily M001_010125 IPR009078 Ferritin-like superfamily M001_010125 IPR000358 Ribonucleotide reductase small subunit family M001_010125 IPR012348 Ribonucleotide reductase-like M001_010125 IPR033909 Ribonucleotide reductase small subunit M001_010125 IPR030475 Ribonucleotide reductase small subunit, acitve site M001_010130 IPR005144 ATP-cone domain M001_010130 IPR013509 Ribonucleotide reductase large subunit, N-terminal M001_010130 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal M001_010130 IPR039718 Ribonucleoside-diphosphate reductase large subunit M001_010130 IPR000788 Ribonucleotide reductase large subunit, C-terminal M001_010130 IPR013346 Ribonucleotide reductase, class I , alpha subunit M001_010135 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_010135 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic M001_010135 IPR023214 HAD superfamily M001_010135 IPR041492 Haloacid dehalogenase-like hydrolase M001_010135 IPR006439 HAD hydrolase, subfamily IA M001_010135 IPR036412 HAD-like superfamily M001_010140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_010140 IPR010233 Ubiquinone biosynthesis O-methyltransferase M001_010145 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily M001_010145 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta M001_010145 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal M001_010145 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M001_010145 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M001_010145 IPR005743 DNA gyrase, subunit A M001_010145 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat M001_010150 IPR006046 Alpha amylase M001_010150 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_010150 IPR017853 Glycoside hydrolase superfamily M001_010160 IPR006638 Elp3/MiaB/NifB M001_010160 IPR007197 Radical SAM M001_010160 IPR040086 Protein MJ0683-like M001_010160 IPR013785 Aldolase-type TIM barrel M001_010170 IPR012947 Threonyl/alanyl tRNA synthetase, SAD M001_010170 IPR033728 Threonine-tRNA ligase catalytic core domain M001_010170 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M001_010170 IPR006195 Aminoacyl-tRNA synthetase, class II M001_010170 IPR004154 Anticodon-binding M001_010170 IPR036621 Anticodon-binding domain superfamily M001_010170 IPR012675 Beta-grasp domain superfamily M001_010170 IPR004095 TGS M001_010170 IPR012676 TGS-like M001_010170 IPR002320 Threonine-tRNA ligase, class IIa M001_010170 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily M001_010175 IPR019814 Translation initiation factor 3, N-terminal M001_010175 IPR019815 Translation initiation factor 3, C-terminal M001_010175 IPR001288 Translation initiation factor 3 M001_010175 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily M001_010175 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily M001_010175 IPR019813 Translation initiation factor 3, conserved site M001_010180 IPR021137 Ribosomal protein L35 M001_010180 IPR037229 Ribosomal protein L35 superfamily M001_010180 IPR001706 Ribosomal protein L35, non-mitochondrial M001_010180 IPR018265 Ribosomal protein L35, conserved site M001_010185 IPR005813 Ribosomal protein L20 M001_010185 IPR035566 Ribosomal protein L20, C-terminal M001_010190 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M001_010190 IPR002319 Phenylalanyl-tRNA synthetase M001_010190 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial M001_010190 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal M001_010190 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit M001_010190 IPR006195 Aminoacyl-tRNA synthetase, class II M001_010195 IPR005147 tRNA synthetase, B5-domain M001_010195 IPR002547 tRNA-binding domain M001_010195 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain M001_010195 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 M001_010195 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit M001_010195 IPR012340 Nucleic acid-binding, OB-fold M001_010195 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily M001_010195 IPR009061 Putative DNA-binding domain superfamily M001_010195 IPR005146 B3/B4 tRNA-binding domain M001_010195 IPR005121 Ferrodoxin-fold anticodon-binding domain M001_010195 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain M001_010200 IPR000119 Histone-like DNA-binding protein M001_010200 IPR020816 Histone-like DNA-binding protein, conserved site M001_010200 IPR005684 Integration host factor, alpha subunit M001_010200 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M001_010205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_010205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_010205 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal M001_010205 IPR001789 Signal transduction response regulator, receiver domain M001_010205 IPR030856 Sensor histidine kinase RcsC M001_010205 IPR005467 Histidine kinase domain M001_010205 IPR038388 RcsC, C-terminal domain superfamily M001_010205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_010205 IPR011006 CheY-like superfamily M001_010205 IPR003594 Histidine kinase/HSP90-like ATPase M001_010205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_010220 IPR026590 Sirtuin family, catalytic core domain M001_010220 IPR027546 Sirtuin, class III M001_010220 IPR026591 Sirtuin, catalytic core small domain superfamily M001_010220 IPR029035 DHS-like NAD/FAD-binding domain superfamily M001_010220 IPR003000 Sirtuin family M001_010230 IPR003660 HAMP domain M001_010230 IPR029787 Nucleotide cyclase M001_010230 IPR033417 Periplasmic sensor domain CHASE8 M001_010230 IPR000160 GGDEF domain M001_010235 IPR023588 Transcription regulator HTH, PurR M001_010235 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_010235 IPR000843 LacI-type HTH domain M001_010235 IPR028082 Periplasmic binding protein-like I M001_010240 IPR029056 Ribokinase-like M001_010240 IPR002139 Ribokinase/fructokinase M001_010240 IPR011611 Carbohydrate kinase PfkB M001_010240 IPR011877 Ribokinase M001_010240 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M001_010245 IPR028082 Periplasmic binding protein-like I M001_010245 IPR025997 Periplasmic binding protein M001_010250 IPR001851 ABC transporter, permease M001_010255 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010255 IPR003439 ABC transporter-like M001_010255 IPR015861 ABC transporter, ribose import, RbsA M001_010255 IPR003593 AAA+ ATPase domain M001_010255 IPR017871 ABC transporter, conserved site M001_010260 IPR023064 D-ribose pyranase M001_010260 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU M001_010260 IPR023750 RbsD-like superfamily M001_010265 IPR036249 Thioredoxin-like superfamily M001_010265 IPR004046 Glutathione S-transferase, C-terminal M001_010265 IPR040079 Glutathione Transferase family M001_010265 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M001_010265 IPR010987 Glutathione S-transferase, C-terminal-like M001_010265 IPR004045 Glutathione S-transferase, N-terminal M001_010280 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein M001_010280 IPR006059 Bacterial extracellular solute-binding protein M001_010285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_010285 IPR035906 MetI-like superfamily M001_010290 IPR035906 MetI-like superfamily M001_010290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_010295 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit M001_010295 IPR017871 ABC transporter, conserved site M001_010295 IPR008995 Molybdate/tungstate binding, C-terminal M001_010295 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA M001_010295 IPR003593 AAA+ ATPase domain M001_010295 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010295 IPR013611 Transport-associated OB, type 2 M001_010295 IPR003439 ABC transporter-like M001_010310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_010310 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal M001_010310 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase M001_010310 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type M001_010315 IPR006016 UspA M001_010320 IPR000595 Cyclic nucleotide-binding domain M001_010320 IPR012318 Crp-type HTH domain M001_010320 IPR014710 RmlC-like jelly roll fold M001_010320 IPR018335 Transcription regulator HTH, Crp-type, conserved site M001_010320 IPR036388 Winged helix-like DNA-binding domain superfamily M001_010320 IPR036390 Winged helix DNA-binding domain superfamily M001_010320 IPR018490 Cyclic nucleotide-binding-like M001_010335 IPR006122 Heavy metal-associated domain, copper ion-binding M001_010335 IPR036163 Heavy metal-associated domain superfamily M001_010335 IPR006121 Heavy metal-associated domain, HMA M001_010335 IPR023299 P-type ATPase, cytoplasmic domain N M001_010335 IPR023298 P-type ATPase, transmembrane domain superfamily M001_010335 IPR018303 P-type ATPase, phosphorylation site M001_010335 IPR001757 P-type ATPase M001_010335 IPR008250 P-type ATPase, A domain superfamily M001_010335 IPR017969 Heavy-metal-associated, conserved site M001_010335 IPR036412 HAD-like superfamily M001_010335 IPR023214 HAD superfamily M001_010335 IPR027256 P-type ATPase, subfamily IB M001_010345 IPR036909 Cytochrome c-like domain superfamily M001_010345 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal M001_010345 IPR004678 Cytochrome c oxidase cbb3-type, subunit III M001_010345 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily M001_010345 IPR009056 Cytochrome c-like domain M001_010345 IPR008168 Cytochrome c, class IC M001_010360 IPR023616 Cytochrome c oxidase-like, subunit I domain M001_010360 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site M001_010360 IPR004677 Cytochrome c oxidase cbb3-type, subunit I M001_010360 IPR000883 Cytochrome c oxidase subunit I M001_010360 IPR036927 Cytochrome c oxidase-like, subunit I superfamily M001_010370 IPR029016 GAF-like domain superfamily M001_010370 IPR000614 Free Met sulfoxide reductase conserved site M001_010370 IPR003018 GAF domain M001_010375 IPR023529 RNA chaperone ProQ M001_010375 IPR016103 ProQ/FinO domain M001_010375 IPR036442 ProQ/FinO domain superfamily M001_010375 IPR035236 RNA chaperone ProQ, C-terminal M001_010380 IPR040573 Tail specific protease, N-terminal domain M001_010380 IPR020992 Tail specific protease, C-terminal M001_010380 IPR005151 Tail specific protease M001_010380 IPR004447 C-terminal-processing peptidase S41A M001_010380 IPR036034 PDZ superfamily M001_010380 IPR001478 PDZ domain M001_010380 IPR029045 ClpP/crotonase-like domain superfamily M001_010385 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily M001_010385 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal M001_010385 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold M001_010385 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase M001_010385 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily M001_010385 IPR027268 Peptidase M4/M1, CTD superfamily M001_010385 IPR014782 Peptidase M1, membrane alanine aminopeptidase M001_010385 IPR012779 Peptidase M1, alanyl aminopeptidase M001_010385 IPR042097 Aminopeptidase N-like , N-terminal M001_010395 IPR036291 NAD(P)-binding domain superfamily M001_010395 IPR028971 NAD-glutamate dehydrogenase M001_010395 IPR007780 NAD-glutamate dehydrogenase, bacteria M001_010400 IPR013785 Aldolase-type TIM barrel M001_010400 IPR005720 Dihydroorotate dehydrogenase domain M001_010400 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 M001_010400 IPR005719 Dihydroorotate dehydrogenase, class 2 M001_010400 IPR001295 Dihydroorotate dehydrogenase, conserved site M001_010405 IPR009809 Cell division protein ZapC M001_010415 IPR042105 Ribosomal protein L31 superfamily M001_010415 IPR027493 Ribosomal protein L31 type B M001_010415 IPR002150 Ribosomal protein L31 M001_010415 IPR034704 L28p-like M001_010420 IPR000473 Ribosomal protein L36 M001_010420 IPR035977 Ribosomal protein L36 superfamily M001_010425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_010425 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_010425 IPR000241 Putative RNA methylase domain M001_010425 IPR019614 S-adenosylmethionine-dependent methyltransferase M001_010425 IPR004114 THUMP domain M001_010425 IPR017244 Ribosomal RNA large subunit methyltransferase K/L M001_010440 IPR023200 Ribosome modulation factor domain superfamily M001_010440 IPR007040 Ribosome modulation factor M001_010445 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ M001_010445 IPR029069 HotDog domain superfamily M001_010445 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA M001_010450 IPR008269 Peptidase S16, Lon proteolytic domain M001_010450 IPR041699 Lon protease, AAA domain M001_010450 IPR027065 Lon protease M001_010450 IPR020568 Ribosomal protein S5 domain 2-type fold M001_010450 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_010495 IPR008900 Zona occludens toxin, N-terminal M001_010530 IPR009813 Uncharacterised protein family YebG M001_010530 IPR038627 YebG-like superfamily M001_010535 IPR029058 Alpha/Beta hydrolase fold M001_010535 IPR002918 Lipase EstA/Esterase EstB M001_010540 IPR036291 NAD(P)-binding domain superfamily M001_010540 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_010540 IPR002347 Short-chain dehydrogenase/reductase SDR M001_010565 IPR014292 Acyltransferase, WS/DGAT/MGAT M001_010565 IPR004255 O-acyltransferase, WSD1, N-terminal M001_010565 IPR009721 O-acyltransferase WSD1, C-terminal M001_010580 IPR024473 Transposase, IS4, N-terminal M001_010580 IPR002559 Transposase, IS4-like M001_010580 IPR012337 Ribonuclease H-like superfamily M001_010585 IPR042188 MmgE/PrpD superfamily, domain 2 M001_010585 IPR042183 MmgE/PrpD superfamily, domain 1 M001_010585 IPR036148 MmgE/PrpD superfamily M001_010585 IPR012705 2-methylcitrate dehydratase PrpD M001_010585 IPR005656 MmgE/PrpD M001_010590 IPR016143 Citrate synthase-like, small alpha subdomain M001_010590 IPR024176 Citrate synthase, bacterial-type M001_010590 IPR019810 Citrate synthase active site M001_010590 IPR002020 Citrate synthase M001_010590 IPR016142 Citrate synthase-like, large alpha subdomain M001_010590 IPR011278 2-methylcitrate synthase/citrate synthase type I M001_010590 IPR036969 Citrate synthase superfamily M001_010595 IPR039556 ICL/PEPM domain M001_010595 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site M001_010595 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_010595 IPR012695 2-methylisocitrate lyase M001_010595 IPR040442 Pyruvate kinase-like domain superfamily M001_010605 IPR007498 Intermembrane transport protein PqiA-like M001_010605 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type M001_010610 IPR003399 Mce/MlaD M001_010615 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain M001_010615 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site M001_010615 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal M001_010615 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type M001_010615 IPR011023 Nop2p M001_010615 IPR023267 RNA (C5-cytosine) methyltransferase M001_010615 IPR023545 rRNA small subunit methyltransferase F M001_010615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_010625 IPR010998 Integrase/recombinase, N-terminal M001_010625 IPR002104 Integrase, catalytic domain M001_010625 IPR013762 Integrase-like, catalytic domain superfamily M001_010625 IPR011010 DNA breaking-rejoining enzyme, catalytic core M001_010630 IPR001130 TatD family M001_010630 IPR018228 Deoxyribonuclease, TatD-related, conserved site M001_010630 IPR015991 Uncharacterised hydrolase TatD-type M001_010630 IPR032466 Metal-dependent hydrolase M001_010635 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010635 IPR015199 DNA polymerase III, delta subunit, C-terminal M001_010635 IPR004622 DNA polymerase III, delta prime subunit M001_010635 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal M001_010640 IPR039430 Thymidylate kinase-like domain M001_010640 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010640 IPR018094 Thymidylate kinase M001_010640 IPR018095 Thymidylate kinase, conserved site M001_010645 IPR003770 Endolytic murein transglycosylase M001_010650 IPR001544 Aminotransferase class IV M001_010650 IPR017824 Aminodeoxychorismate lyase, class IV M001_010650 IPR036038 Aminotransferase-like, PLP-dependent enzymes M001_010650 IPR018300 Aminotransferase, class IV, conserved site M001_010655 IPR014031 Beta-ketoacyl synthase, C-terminal M001_010655 IPR014030 Beta-ketoacyl synthase, N-terminal M001_010655 IPR018201 Beta-ketoacyl synthase, active site M001_010655 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M001_010655 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 M001_010655 IPR016039 Thiolase-like M001_010655 IPR000794 Beta-ketoacyl synthase M001_010660 IPR006162 Phosphopantetheine attachment site M001_010660 IPR036736 ACP-like superfamily M001_010660 IPR009081 Phosphopantetheine binding ACP domain M001_010660 IPR003231 Acyl carrier protein (ACP) M001_010665 IPR036291 NAD(P)-binding domain superfamily M001_010665 IPR002347 Short-chain dehydrogenase/reductase SDR M001_010665 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase M001_010665 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_010670 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type M001_010670 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M001_010670 IPR001227 Acyl transferase domain superfamily M001_010670 IPR014043 Acyl transferase M001_010670 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M001_010670 IPR024925 Malonyl CoA-acyl carrier protein transacylase M001_010675 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M001_010675 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal M001_010675 IPR016039 Thiolase-like M001_010675 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 M001_010680 IPR003664 Fatty acid synthesis PlsX protein M001_010680 IPR012281 Phospholipid biosynthesis protein, PlsX-like M001_010685 IPR011332 Zinc-binding ribosomal protein M001_010685 IPR002677 Ribosomal protein L32p M001_010690 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria M001_010690 IPR003772 Large ribosomal RNA subunit accumulation protein YceD M001_010695 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein M001_010695 IPR029001 Inosine triphosphate pyrophosphatase-like M001_010700 IPR023733 Pyrophosphatase PpaX M001_010700 IPR036412 HAD-like superfamily M001_010700 IPR041492 Haloacid dehalogenase-like hydrolase M001_010700 IPR023214 HAD superfamily M001_010700 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_010700 IPR006439 HAD hydrolase, subfamily IA M001_010705 IPR002942 RNA-binding S4 domain M001_010705 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_010705 IPR006225 Pseudouridine synthase, RluC/RluD M001_010705 IPR036986 RNA-binding S4 domain superfamily M001_010705 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M001_010705 IPR006145 Pseudouridine synthase, RsuA/RluA M001_010710 IPR003029 S1 domain M001_010710 IPR022967 RNA-binding domain, S1 M001_010710 IPR004659 Ribonuclease E/G M001_010710 IPR028878 Ribonuclease E M001_010710 IPR021968 Polyribonucleotide phosphorylase C-terminal M001_010710 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G M001_010710 IPR012340 Nucleic acid-binding, OB-fold M001_010720 IPR006327 Phosphotransferase system, fructose IIC component M001_010720 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M001_010720 IPR036095 PTS system IIB component-like superfamily M001_010720 IPR013011 Phosphotransferase system, EIIB component, type 2 M001_010720 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M001_010720 IPR003352 Phosphotransferase system, EIIC M001_010720 IPR013014 Phosphotransferase system, EIIC component, type 2 M001_010725 IPR022463 Fructose 1-phosphate kinase M001_010725 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M001_010725 IPR011611 Carbohydrate kinase PfkB M001_010725 IPR029056 Ribokinase-like M001_010725 IPR017583 Tagatose/fructose phosphokinase M001_010730 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M001_010730 IPR016152 Phosphotransferase/anion transporter M001_010730 IPR002178 PTS EIIA type-2 domain M001_010730 IPR000032 Phosphocarrier protein HPr-like M001_010730 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M001_010730 IPR035895 HPr-like superfamily M001_010735 IPR000843 LacI-type HTH domain M001_010735 IPR012781 D-fructose-responsive transcription factor M001_010735 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_010735 IPR028082 Periplasmic binding protein-like I M001_010735 IPR001761 Periplasmic binding protein/LacI sugar binding domain M001_010740 IPR013059 Tryptophan/tyrosine transporter M001_010740 IPR013061 Tryptophan/tryrosine permease, conserved site M001_010740 IPR018227 Amino acid/polyamine transporter 2 M001_010750 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily M001_010750 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein M001_010760 IPR028622 ATP-dependent RNA helicase RhlE M001_010760 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_010760 IPR011545 DEAD/DEAH box helicase domain M001_010760 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010760 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_010760 IPR014014 RNA helicase, DEAD-box type, Q motif M001_010760 IPR001650 Helicase, C-terminal M001_010770 IPR020541 Chorismate synthase, conserved site M001_010770 IPR035904 Chorismate synthase AroC superfamily M001_010770 IPR000453 Chorismate synthase M001_010775 IPR007848 Methyltransferase small domain M001_010775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_010775 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase M001_010775 IPR004556 Methyltransferase HemK-like M001_010775 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_010780 IPR036063 Smr domain superfamily M001_010780 IPR002625 Smr domain M001_010780 IPR022990 Uncharacterised protein family UPF0115 M001_010785 IPR013656 PAS fold-4 M001_010785 IPR035965 PAS domain superfamily M001_010785 IPR000160 GGDEF domain M001_010785 IPR029787 Nucleotide cyclase M001_010785 IPR000014 PAS domain M001_010785 IPR000700 PAS-associated, C-terminal M001_010790 IPR029033 Histidine phosphatase superfamily M001_010790 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site M001_010790 IPR023086 Phosphoglycerate mutase, GpmB, probable M001_010790 IPR013078 Histidine phosphatase superfamily, clade-1 M001_010800 IPR014756 Immunoglobulin E-set M001_010800 IPR001223 Glycoside hydrolase family 18, catalytic domain M001_010800 IPR013540 Chitinase A N-terminal M001_010800 IPR029070 Chitinase insertion domain superfamily M001_010800 IPR011583 Chitinase II M001_010800 IPR022409 PKD/Chitinase domain M001_010800 IPR013783 Immunoglobulin-like fold M001_010800 IPR017853 Glycoside hydrolase superfamily M001_010800 IPR003610 Carbohydrate-binding module family 5/12 M001_010800 IPR002126 Cadherin-like M001_010800 IPR036573 Carbohydrate-binding module superfamily 5/12 M001_010800 IPR001579 Glycoside hydrolase, chitinase active site M001_010810 IPR004624 PhnA protein M001_010810 IPR013988 PhnA protein, C-terminal M001_010810 IPR013987 PhnA protein, N-terminal M001_010820 IPR005802 Aminodeoxychorismate synthase, component I M001_010820 IPR005801 ADC synthase M001_010820 IPR006805 Anthranilate synthase component I, N-terminal M001_010820 IPR015890 Chorismate-utilising enzyme, C-terminal M001_010820 IPR019999 Anthranilate synthase component I-like M001_010825 IPR023735 Uncharacterised nudix hydrolase NudL M001_010825 IPR000059 NUDIX hydrolase, NudL, conserved site M001_010825 IPR000086 NUDIX hydrolase domain M001_010825 IPR015797 NUDIX hydrolase-like domain superfamily M001_010830 IPR004694 Hydroxy amino acid transporter M001_010830 IPR018227 Amino acid/polyamine transporter 2 M001_010840 IPR036458 Sodium:dicarboxylate symporter superfamily M001_010840 IPR023025 Serine/threonine transporter SstT M001_010840 IPR001991 Sodium:dicarboxylate symporter M001_010845 IPR002121 HRDC domain M001_010845 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_010845 IPR004589 DNA helicase, ATP-dependent, RecQ type M001_010845 IPR011545 DEAD/DEAH box helicase domain M001_010845 IPR001650 Helicase, C-terminal M001_010845 IPR010997 HRDC-like superfamily M001_010845 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M001_010845 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010845 IPR018982 RQC domain M001_010845 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial M001_010845 IPR036388 Winged helix-like DNA-binding domain superfamily M001_010850 IPR016230 Serine-protein kinase, PrkA M001_010850 IPR013153 PrkA AAA domain M001_010850 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010850 IPR010650 PrkA C-terminal domain M001_010855 IPR006698 Uncharacterised protein family UPF0229 M001_010860 IPR007390 Sporulation stage V, protein R M001_010865 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding M001_010865 IPR036291 NAD(P)-binding domain superfamily M001_010865 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal M001_010865 IPR012802 Fatty oxidation complex, alpha subunit FadJ M001_010865 IPR029045 ClpP/crotonase-like domain superfamily M001_010865 IPR001753 Enoyl-CoA hydratase/isomerase M001_010865 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_010870 IPR020613 Thiolase, conserved site M001_010870 IPR020616 Thiolase, N-terminal M001_010870 IPR020615 Thiolase, acyl-enzyme intermediate active site M001_010870 IPR016039 Thiolase-like M001_010870 IPR002155 Thiolase M001_010870 IPR012806 Acetyl-CoA C-acyltransferase FadI M001_010870 IPR020617 Thiolase, C-terminal M001_010875 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010875 IPR041628 ChlI/MoxR, AAA lid domain M001_010875 IPR011703 ATPase, AAA-3 M001_010880 IPR036465 von Willebrand factor A-like domain superfamily M001_010880 IPR002881 Domain of unknown function DUF58 M001_010895 IPR002035 von Willebrand factor, type A M001_010895 IPR036465 von Willebrand factor A-like domain superfamily M001_010895 IPR022933 Uncharacterised protein family UPF0353 M001_010905 IPR007627 RNA polymerase sigma-70 region 2 M001_010905 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site M001_010905 IPR014293 RNA polymerase sigma-70, actinobacteria M001_010905 IPR014284 RNA polymerase sigma-70 like domain M001_010905 IPR039425 RNA polymerase sigma-70 like M001_010905 IPR013325 RNA polymerase sigma factor, region 2 M001_010905 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 M001_010905 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_010905 IPR036388 Winged helix-like DNA-binding domain superfamily M001_010915 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M001_010915 IPR042117 OMPP1/FadL/TodX superfamily M001_010920 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M001_010920 IPR042117 OMPP1/FadL/TodX superfamily M001_010925 IPR013976 Metal-dependent hydrolase HDOD M001_010925 IPR035919 EAL domain superfamily M001_010925 IPR001633 EAL domain M001_010925 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing M001_010930 IPR020616 Thiolase, N-terminal M001_010930 IPR020613 Thiolase, conserved site M001_010930 IPR020617 Thiolase, C-terminal M001_010930 IPR002155 Thiolase M001_010930 IPR020610 Thiolase, active site M001_010930 IPR020615 Thiolase, acyl-enzyme intermediate active site M001_010930 IPR016039 Thiolase-like M001_010935 IPR015358 Transcription regulator MerR, DNA binding M001_010935 IPR000551 MerR-type HTH domain M001_010935 IPR011789 Cu(I)-responsive transcriptional regulator M001_010935 IPR009061 Putative DNA-binding domain superfamily M001_010940 IPR029751 Ribosomal protein L25 M001_010940 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily M001_010940 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal M001_010940 IPR001021 Ribosomal protein L25, long-form M001_010940 IPR020055 Ribosomal protein L25, short-form M001_010950 IPR003593 AAA+ ATPase domain M001_010950 IPR011545 DEAD/DEAH box helicase domain M001_010950 IPR011709 Domain of unknown function DUF1605 M001_010950 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_010950 IPR007502 Helicase-associated domain M001_010950 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010950 IPR024590 RNA helicase HrpA, C-terminal M001_010950 IPR010222 RNA helicase HrpA M001_010950 IPR001650 Helicase, C-terminal M001_010955 IPR002646 Poly A polymerase, head domain M001_010955 IPR003156 DHHA1 domain M001_010955 IPR001667 DDH domain M001_010955 IPR000644 CBS domain M001_010955 IPR038763 DHH phosphoesterase superfamily M001_010960 IPR037522 HD-GYP domain M001_010960 IPR006674 HD domain M001_010960 IPR003607 HD/PDEase domain M001_010960 IPR006675 HDIG domain M001_010965 IPR000917 Sulfatase, N-terminal M001_010965 IPR024607 Sulfatase, conserved site M001_010965 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_010970 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_010970 IPR041628 ChlI/MoxR, AAA lid domain M001_010970 IPR011703 ATPase, AAA-3 M001_010985 IPR024163 Aerotolerance regulator, N-terminal M001_010985 IPR036465 von Willebrand factor A-like domain superfamily M001_010985 IPR022933 Uncharacterised protein family UPF0353 M001_010985 IPR002035 von Willebrand factor, type A M001_010990 IPR022933 Uncharacterised protein family UPF0353 M001_010990 IPR036465 von Willebrand factor A-like domain superfamily M001_010990 IPR024163 Aerotolerance regulator, N-terminal M001_010990 IPR002035 von Willebrand factor, type A M001_011000 IPR005119 LysR, substrate-binding M001_011000 IPR036388 Winged helix-like DNA-binding domain superfamily M001_011000 IPR000847 Transcription regulator HTH, LysR M001_011000 IPR036390 Winged helix DNA-binding domain superfamily M001_011000 IPR037416 Nodulation protein D, PBP2 M001_011005 IPR042095 Sulfatase-modifying factor enzyme superfamily M001_011005 IPR016187 C-type lectin fold M001_011005 IPR005532 Sulfatase-modifying factor enzyme M001_011015 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme M001_011015 IPR013785 Aldolase-type TIM barrel M001_011015 IPR007197 Radical SAM M001_011015 IPR023885 4Fe4S-binding SPASM domain M001_011020 IPR012337 Ribonuclease H-like superfamily M001_011020 IPR023607 Exodeoxyribonuclease I M001_011020 IPR013620 Exodeoxyribonuclease I, C-terminal M001_011020 IPR038649 Exonuclease I, SH3-like domain superfamily M001_011020 IPR034747 Exonuclease I, SH3-like domain M001_011020 IPR036397 Ribonuclease H superfamily M001_011020 IPR013520 Exonuclease, RNase T/DNA polymerase III M001_011020 IPR034748 Exonuclease I, C-terminal alpha-helical domain M001_011030 IPR011013 Galactose mutarotase-like domain superfamily M001_011030 IPR017853 Glycoside hydrolase superfamily M001_011030 IPR013785 Aldolase-type TIM barrel M001_011035 IPR005538 LrgA/CidA family M001_011035 IPR022957 Uncharacterised protein family UPF0299 M001_011040 IPR005261 Conserved hypothetical protein CHP00659 M001_011040 IPR007300 CidB/LrgB family M001_011045 IPR002125 Cytidine and deoxycytidylate deaminase domain M001_011045 IPR016192 APOBEC/CMP deaminase, zinc-binding M001_011045 IPR006263 Cytidine deaminase, homodimeric M001_011045 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain M001_011045 IPR016193 Cytidine deaminase-like M001_011045 IPR020797 Cytidine deaminase, bacteria M001_011050 IPR013440 Tryptophanase M001_011050 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_011050 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_011050 IPR011166 Beta-eliminating lyase family M001_011050 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase M001_011050 IPR015424 Pyridoxal phosphate-dependent transferase M001_011060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_011060 IPR007357 Deoxyribodipyrimidine photolyase-related protein M001_011060 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily M001_011065 IPR036188 FAD/NAD(P)-binding domain superfamily M001_011065 IPR023080 D-amino acid dehydrogenase DadA M001_011065 IPR006076 FAD dependent oxidoreductase M001_011070 IPR000534 Semialdehyde dehydrogenase, NAD-binding M001_011070 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type M001_011070 IPR012080 Aspartate-semialdehyde dehydrogenase M001_011070 IPR036291 NAD(P)-binding domain superfamily M001_011070 IPR012280 Semialdehyde dehydrogenase, dimerisation domain M001_011070 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site M001_011075 IPR016193 Cytidine deaminase-like M001_011075 IPR003786 Sulfur carrier protein FdhD M001_011080 IPR003593 AAA+ ATPase domain M001_011080 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_011080 IPR029016 GAF-like domain superfamily M001_011080 IPR009057 Homeobox-like domain superfamily M001_011080 IPR002197 DNA binding HTH domain, Fis-type M001_011080 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011080 IPR003018 GAF domain M001_011080 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_011080 IPR025944 Sigma-54 interaction domain, conserved site M001_011095 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_011095 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_011110 IPR000182 GNAT domain M001_011110 IPR016181 Acyl-CoA N-acyltransferase M001_011115 IPR003855 Potassium transporter M001_011115 IPR023051 Potassium uptake protein, low affinity, Kup M001_011120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_011120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_011125 IPR003918 NADH:ubiquinone oxidoreductase M001_011125 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit M001_011130 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site M001_011130 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H M001_011135 IPR029014 [NiFe]-hydrogenase, large subunit M001_011135 IPR001501 Nickel-dependent hydrogenase, large subunit M001_011135 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site M001_011135 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit M001_011135 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily M001_011135 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily M001_011135 IPR001135 NADH-quinone oxidoreductase, subunit D M001_011140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_011140 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_011140 IPR010226 NADH-quinone oxidoreductase, chain I M001_011145 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit M001_011145 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit M001_011150 IPR010005 Formate hydrogenlyase maturation HycH M001_011155 IPR000671 Peptidase A31 family M001_011155 IPR004420 Peptidase A31, hydrogenase maturation protease HycI M001_011155 IPR023430 Peptidase HybD-like domain superfamily M001_011165 IPR015424 Pyridoxal phosphate-dependent transferase M001_011165 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_011165 IPR018319 L-seryl-tRNA selenium transferase-like M001_011165 IPR004534 L-seryl-tRNA(Sec) selenium transferase M001_011165 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain M001_011170 IPR005225 Small GTP-binding protein domain M001_011170 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011170 IPR004161 Translation elongation factor EFTu-like, domain 2 M001_011170 IPR009000 Translation protein, beta-barrel domain superfamily M001_011170 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M001_011170 IPR000795 Transcription factor, GTP-binding domain M001_011170 IPR015190 Translation elongation factor SelB, winged helix, type 2 M001_011170 IPR036390 Winged helix DNA-binding domain superfamily M001_011170 IPR004535 Translation elongation factor, selenocysteine-specific M001_011170 IPR031157 Tr-type G domain, conserved site M001_011170 IPR015191 Translation elongation factor SelB, winged helix, type 3 M001_011170 IPR036388 Winged helix-like DNA-binding domain superfamily M001_011175 IPR036046 Acylphosphatase-like domain superfamily M001_011175 IPR001792 Acylphosphatase-like domain M001_011175 IPR004421 Carbamoyltransferase, HypF-type M001_011175 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M001_011175 IPR041440 HypF, Kae1-like domain M001_011175 IPR006070 YrdC-like domain M001_011175 IPR011125 Zinc finger, HypF-type M001_011175 IPR017968 Acylphosphatase, conserved site M001_011180 IPR037254 HupF/HypC superfamily M001_011180 IPR019812 Hydrogenase assembly chaperone, conserved site M001_011180 IPR001109 Hydrogenase expression/formation protein, HupF/HypC M001_011185 IPR002780 Hydrogenase formation HypD protein M001_011185 IPR042244 HypD, domain 1 M001_011185 IPR042243 HypD, domain 2 M001_011190 IPR036921 PurM-like, N-terminal domain superfamily M001_011190 IPR036676 PurM-like, C-terminal domain superfamily M001_011190 IPR010918 PurM-like, C-terminal domain M001_011190 IPR011854 Carbamoyl dehydratase HypE M001_011190 IPR016188 PurM-like, N-terminal domain M001_011195 IPR000688 Hydrogenase maturation factor HypA/HybF M001_011195 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site M001_011200 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011200 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M001_011200 IPR004392 Hydrogenase maturation factor HypB M001_011205 IPR003593 AAA+ ATPase domain M001_011205 IPR015858 ABC transporter, nickel import, NikE M001_011205 IPR017871 ABC transporter, conserved site M001_011205 IPR014137 Nickel import ATP-binding protein NikE M001_011205 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011205 IPR003439 ABC transporter-like M001_011210 IPR003593 AAA+ ATPase domain M001_011210 IPR003439 ABC transporter-like M001_011210 IPR017871 ABC transporter, conserved site M001_011210 IPR015857 ABC transporter, nickel import, NikD M001_011210 IPR014138 Nickel import ATP-binding protein NikD M001_011210 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_011215 IPR035906 MetI-like superfamily M001_011215 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M001_011220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_011220 IPR035906 MetI-like superfamily M001_011225 IPR039424 Solute-binding protein family 5 M001_011225 IPR000914 Solute-binding protein family 5 domain M001_011225 IPR030678 Peptide/nickel binding protein, MppA-type M001_011225 IPR023765 Solute-binding protein family 5, conserved site M001_011230 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily M001_011230 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE M001_011235 IPR000671 Peptidase A31 family M001_011235 IPR004419 Peptidase A31, hydrogenase expression/formation protein M001_011235 IPR023430 Peptidase HybD-like domain superfamily M001_011240 IPR001501 Nickel-dependent hydrogenase, large subunit M001_011240 IPR029014 [NiFe]-hydrogenase, large subunit M001_011240 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site M001_011245 IPR005614 NrfD family M001_011250 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M001_011250 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_011250 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_011255 IPR027394 Cytochrome-c3 hydrogenase, C-terminal M001_011255 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily M001_011255 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M001_011255 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit M001_011255 IPR006311 Twin-arginine translocation pathway, signal sequence M001_011255 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily M001_011255 IPR001821 [NiFe]-hydrogenase, small subunit M001_011260 IPR016132 Phytochrome chromophore attachment domain M001_011260 IPR029787 Nucleotide cyclase M001_011260 IPR029016 GAF-like domain superfamily M001_011260 IPR001294 Phytochrome M001_011260 IPR003018 GAF domain M001_011260 IPR013515 Phytochrome, central region M001_011260 IPR035919 EAL domain superfamily M001_011260 IPR001633 EAL domain M001_011260 IPR000160 GGDEF domain M001_011265 IPR001296 Glycosyl transferase, family 1 M001_011265 IPR000368 Sucrose synthase M001_011270 IPR001296 Glycosyl transferase, family 1 M001_011270 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M001_011340 IPR001296 Glycosyl transferase, family 1 M001_011340 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M001_011345 IPR009875 PilZ domain M001_011345 IPR029044 Nucleotide-diphospho-sugar transferases M001_011345 IPR001173 Glycosyltransferase 2-like M001_011345 IPR005150 Cellulose synthase M001_011345 IPR003919 Cellulose synthase, subunit A M001_011350 IPR003362 Bacterial sugar transferase M001_011350 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase M001_011355 IPR001296 Glycosyl transferase, family 1 M001_011360 IPR029787 Nucleotide cyclase M001_011360 IPR011006 CheY-like superfamily M001_011360 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase M001_011360 IPR001789 Signal transduction response regulator, receiver domain M001_011390 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_011390 IPR005467 Histidine kinase domain M001_011390 IPR011006 CheY-like superfamily M001_011390 IPR003594 Histidine kinase/HSP90-like ATPase M001_011390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_011390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_011390 IPR003660 HAMP domain M001_011390 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_011390 IPR019247 Histidine kinase BarA, N-terminal M001_011390 IPR001789 Signal transduction response regulator, receiver domain M001_011390 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_011390 IPR036641 HPT domain superfamily M001_011395 IPR000847 Transcription regulator HTH, LysR M001_011395 IPR036390 Winged helix DNA-binding domain superfamily M001_011395 IPR005119 LysR, substrate-binding M001_011395 IPR036388 Winged helix-like DNA-binding domain superfamily M001_011400 IPR029058 Alpha/Beta hydrolase fold M001_011400 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain M001_011410 IPR011701 Major facilitator superfamily M001_011410 IPR036259 MFS transporter superfamily M001_011410 IPR020846 Major facilitator superfamily domain M001_011435 IPR009057 Homeobox-like domain superfamily M001_011435 IPR006118 Recombinase, conserved site M001_011435 IPR006120 Resolvase, HTH domain M001_011435 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily M001_011435 IPR006119 Resolvase, N-terminal catalytic domain M001_011450 IPR025657 RadC-like JAB domain M001_011450 IPR010994 RuvA domain 2-like M001_011450 IPR037518 MPN domain M001_011450 IPR001405 Uncharacterised protein family UPF0758 M001_011450 IPR020891 Uncharacterised protein family UPF0758, conserved site M001_011475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_011475 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M001_011475 IPR003356 DNA methylase, adenine-specific M001_011565 IPR002781 Transmembrane protein TauE-like M001_011570 IPR004754 Amino acid antiporter M001_011570 IPR002293 Amino acid/polyamine transporter I M001_011570 IPR022461 Arginine/ornithine antiporter M001_011575 IPR002347 Short-chain dehydrogenase/reductase SDR M001_011575 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase M001_011575 IPR036291 NAD(P)-binding domain superfamily M001_011575 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_011580 IPR015815 3-hydroxyisobutyrate dehydrogenase-related M001_011580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_011580 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding M001_011580 IPR011548 3-hydroxyisobutyrate dehydrogenase M001_011580 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site M001_011580 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M001_011580 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain M001_011580 IPR036291 NAD(P)-binding domain superfamily M001_011585 IPR001753 Enoyl-CoA hydratase/isomerase M001_011585 IPR029045 ClpP/crotonase-like domain superfamily M001_011585 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M001_011585 IPR014748 Enoyl-CoA hydratase, C-terminal M001_011590 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M001_011590 IPR001753 Enoyl-CoA hydratase/isomerase M001_011590 IPR014748 Enoyl-CoA hydratase, C-terminal M001_011590 IPR029045 ClpP/crotonase-like domain superfamily M001_011595 IPR006089 Acyl-CoA dehydrogenase, conserved site M001_011595 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain M001_011595 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily M001_011595 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily M001_011595 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal M001_011595 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal M001_011595 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal M001_011600 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal M001_011600 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily M001_011600 IPR006089 Acyl-CoA dehydrogenase, conserved site M001_011600 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily M001_011600 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal M001_011600 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal M001_011600 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain M001_011605 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal M001_011605 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal M001_011605 IPR034733 Acetyl-CoA carboxylase M001_011605 IPR029045 ClpP/crotonase-like domain superfamily M001_011610 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M001_011610 IPR029045 ClpP/crotonase-like domain superfamily M001_011610 IPR014748 Enoyl-CoA hydratase, C-terminal M001_011610 IPR001753 Enoyl-CoA hydratase/isomerase M001_011615 IPR016185 Pre-ATP-grasp domain superfamily M001_011615 IPR011053 Single hybrid motif M001_011615 IPR011764 Biotin carboxylation domain M001_011615 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain M001_011615 IPR001882 Biotin-binding site M001_011615 IPR005482 Biotin carboxylase, C-terminal M001_011615 IPR011054 Rudiment single hybrid motif M001_011615 IPR005481 Biotin carboxylase-like, N-terminal domain M001_011615 IPR000089 Biotin/lipoyl attachment M001_011615 IPR011761 ATP-grasp fold M001_011620 IPR000891 Pyruvate carboxyltransferase M001_011620 IPR013785 Aldolase-type TIM barrel M001_011620 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site M001_011625 IPR000551 MerR-type HTH domain M001_011625 IPR015358 Transcription regulator MerR, DNA binding M001_011625 IPR009061 Putative DNA-binding domain superfamily M001_011625 IPR011789 Cu(I)-responsive transcriptional regulator M001_011640 IPR000791 Acetate transporter GPR1/FUN34/SatP family M001_011645 IPR001279 Metallo-beta-lactamase M001_011645 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M001_011645 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D M001_011650 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic M001_011650 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal M001_011650 IPR000312 Glycosyl transferase, family 3 M001_011650 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily M001_011650 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily M001_011650 IPR017459 Glycosyl transferase family 3, N-terminal domain M001_011650 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site M001_011650 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily M001_011650 IPR013465 Thymidine phosphorylase M001_011650 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase M001_011655 IPR013785 Aldolase-type TIM barrel M001_011655 IPR011343 Deoxyribose-phosphate aldolase M001_011655 IPR002915 DeoC/FbaB/ lacD aldolase M001_011655 IPR023649 Deoxyribose-phosphate aldolase type II M001_011665 IPR029058 Alpha/Beta hydrolase fold M001_011665 IPR022742 Serine aminopeptidase, S33 M001_011670 IPR005119 LysR, substrate-binding M001_011670 IPR000847 Transcription regulator HTH, LysR M001_011670 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain M001_011670 IPR036388 Winged helix-like DNA-binding domain superfamily M001_011670 IPR036390 Winged helix DNA-binding domain superfamily M001_011675 IPR029058 Alpha/Beta hydrolase fold M001_011675 IPR022742 Serine aminopeptidase, S33 M001_011680 IPR024079 Metallopeptidase, catalytic domain superfamily M001_011680 IPR010384 MtfA family M001_011680 IPR042252 MtfA, N-terminal M001_011690 IPR001463 Sodium:alanine symporter M001_011720 IPR006430 Phage portal protein PBSX family M001_011720 IPR030935 Phage portal protein PBSX family, Proteobacteria M001_011725 IPR029045 ClpP/crotonase-like domain superfamily M001_011725 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M001_011725 IPR001753 Enoyl-CoA hydratase/isomerase M001_011740 IPR007436 Protein of unknown function DUF485 M001_011745 IPR018212 Sodium/solute symporter, conserved site M001_011745 IPR001734 Sodium/solute symporter M001_011745 IPR038377 Sodium/glucose symporter superfamily M001_011745 IPR014083 Cation/acetate symporter ActP M001_011750 IPR032781 ABC-transporter extension domain M001_011750 IPR003439 ABC transporter-like M001_011750 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011750 IPR003593 AAA+ ATPase domain M001_011755 IPR027304 Trigger factor/SurA domain superfamily M001_011755 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site M001_011755 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type M001_011760 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M001_011760 IPR020816 Histone-like DNA-binding protein, conserved site M001_011760 IPR000119 Histone-like DNA-binding protein M001_011765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_011765 IPR004815 Lon protease, bacterial/eukaryotic-type M001_011765 IPR003111 Lon, substrate-binding domain M001_011765 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011765 IPR020568 Ribosomal protein S5 domain 2-type fold M001_011765 IPR008269 Peptidase S16, Lon proteolytic domain M001_011765 IPR027543 Lon protease, bacterial M001_011765 IPR015947 PUA-like superfamily M001_011765 IPR003959 ATPase, AAA-type, core M001_011765 IPR003593 AAA+ ATPase domain M001_011765 IPR027065 Lon protease M001_011765 IPR008268 Peptidase S16, active site M001_011770 IPR019489 Clp ATPase, C-terminal M001_011770 IPR004487 Clp protease, ATP-binding subunit ClpX M001_011770 IPR003959 ATPase, AAA-type, core M001_011770 IPR003593 AAA+ ATPase domain M001_011770 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011770 IPR010603 Zinc finger, ClpX C4-type M001_011770 IPR038366 Zinc finger, ClpX C4-type superfamily M001_011775 IPR001907 ATP-dependent Clp protease proteolytic subunit M001_011775 IPR029045 ClpP/crotonase-like domain superfamily M001_011775 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA M001_011775 IPR033135 ClpP, histidine active site M001_011775 IPR018215 ClpP, Ser active site M001_011780 IPR008880 Trigger factor, C-terminal M001_011780 IPR005215 Trigger factor M001_011780 IPR037041 Trigger factor, C-terminal domain superfamily M001_011780 IPR027304 Trigger factor/SurA domain superfamily M001_011780 IPR036611 Trigger factor ribosome-binding domain superfamily M001_011780 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M001_011780 IPR008881 Trigger factor, ribosome-binding, bacterial M001_011790 IPR039356 Metal-dependent nucleoside 5'-monophosphatase M001_011790 IPR022971 5'-deoxynucleotidase YfbR M001_011790 IPR003607 HD/PDEase domain M001_011795 IPR003838 ABC transporter permease protein domain M001_011795 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type M001_011795 IPR025857 MacB-like periplasmic core domain M001_011795 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E M001_011800 IPR017871 ABC transporter, conserved site M001_011800 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011800 IPR011924 Lipoprotein releasing system, ATP-binding protein M001_011800 IPR015854 ABC transporter, lipoprotein release, LolD M001_011800 IPR003439 ABC transporter-like M001_011800 IPR003593 AAA+ ATPase domain M001_011805 IPR003838 ABC transporter permease protein domain M001_011805 IPR025857 MacB-like periplasmic core domain M001_011805 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E M001_011815 IPR003711 CarD-like/TRCF domain M001_011815 IPR041471 UvrB, interaction domain M001_011815 IPR036101 CarD-like/TRCF domain superfamily M001_011815 IPR005118 Transcription-repair-coupling factor, C-terminal domain M001_011815 IPR037235 TRCF-like, C-terminal domain M001_011815 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011815 IPR004576 Transcription-repair coupling factor M001_011815 IPR011545 DEAD/DEAH box helicase domain M001_011815 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_011815 IPR001650 Helicase, C-terminal M001_011820 IPR000146 Fructose-1,6-bisphosphatase class 1 M001_011820 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal M001_011820 IPR028343 Fructose-1,6-bisphosphatase M001_011820 IPR020548 Fructose-1,6-bisphosphatase, active site M001_011825 IPR000914 Solute-binding protein family 5 domain M001_011825 IPR023765 Solute-binding protein family 5, conserved site M001_011825 IPR039424 Solute-binding protein family 5 M001_011825 IPR030678 Peptide/nickel binding protein, MppA-type M001_011830 IPR000620 EamA domain M001_011840 IPR013078 Histidine phosphatase superfamily, clade-1 M001_011840 IPR004449 Phosphohistidine phosphatase SixA M001_011840 IPR029033 Histidine phosphatase superfamily M001_011845 IPR032632 Peptidase M16, middle/third domain M001_011845 IPR011765 Peptidase M16, N-terminal M001_011845 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M001_011845 IPR007863 Peptidase M16, C-terminal M001_011845 IPR001431 Peptidase M16, zinc-binding site M001_011850 IPR008854 TPMT family M001_011850 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification M001_011850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_011850 IPR025835 Thiopurine S-methyltransferase M001_011860 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_011860 IPR036291 NAD(P)-binding domain superfamily M001_011860 IPR002347 Short-chain dehydrogenase/reductase SDR M001_011865 IPR004026 Ada DNA repair, metal-binding M001_011865 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding M001_011865 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site M001_011865 IPR018062 HTH domain AraC-type, conserved site M001_011865 IPR018060 DNA binding HTH domain, AraC-type M001_011865 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain M001_011865 IPR009057 Homeobox-like domain superfamily M001_011865 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily M001_011865 IPR035451 Ada-like domain superfamily M001_011865 IPR036388 Winged helix-like DNA-binding domain superfamily M001_011865 IPR016221 Bifunctional regulatory protein Ada M001_011865 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain M001_011890 IPR022955 GMP synthase M001_011890 IPR025777 GMP synthetase ATP pyrophosphatase domain M001_011890 IPR022310 NAD/GMP synthase M001_011890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_011890 IPR029062 Class I glutamine amidotransferase-like M001_011890 IPR001674 GMP synthase, C-terminal M001_011890 IPR017926 Glutamine amidotransferase M001_011890 IPR004739 GMP synthase, glutamine amidotransferase M001_011895 IPR005990 Inosine-5'-monophosphate dehydrogenase M001_011895 IPR001093 IMP dehydrogenase/GMP reductase M001_011895 IPR000644 CBS domain M001_011895 IPR013785 Aldolase-type TIM barrel M001_011895 IPR015875 IMP dehydrogenase / GMP reductase, conserved site M001_011900 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase M001_011900 IPR016174 Di-haem cytochrome, transmembrane M001_011905 IPR003753 Exonuclease VII, large subunit M001_011905 IPR020579 Exonuclease VII, large subunit, C-terminal M001_011905 IPR025824 OB-fold nucleic acid binding domain M001_011910 IPR036388 Winged helix-like DNA-binding domain superfamily M001_011910 IPR036390 Winged helix DNA-binding domain superfamily M001_011910 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M001_011910 IPR000524 Transcription regulator HTH, GntR M001_011910 IPR011663 UbiC transcription regulator-associated M001_011915 IPR004715 Phosphotransferase system, IIA component fructose subfamily M001_011915 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M001_011915 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M001_011915 IPR013011 Phosphotransferase system, EIIB component, type 2 M001_011915 IPR036095 PTS system IIB component-like superfamily M001_011915 IPR002178 PTS EIIA type-2 domain M001_011915 IPR006327 Phosphotransferase system, fructose IIC component M001_011915 IPR016152 Phosphotransferase/anion transporter M001_011915 IPR013014 Phosphotransferase system, EIIC component, type 2 M001_011915 IPR003352 Phosphotransferase system, EIIC M001_011920 IPR000602 Glycoside hydrolase family 38, N-terminal domain M001_011920 IPR037094 Glycoside hydrolase family 38, central domain superfamily M001_011920 IPR015341 Glycoside hydrolase family 38, central domain M001_011920 IPR011682 Glycosyl hydrolase family 38, C-terminal M001_011920 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel M001_011920 IPR011013 Galactose mutarotase-like domain superfamily M001_011920 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily M001_011920 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily M001_011925 IPR011761 ATP-grasp fold M001_011925 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site M001_011925 IPR016185 Pre-ATP-grasp domain superfamily M001_011925 IPR011127 D-alanine--D-alanine ligase, N-terminal domain M001_011925 IPR011095 D-alanine--D-alanine ligase, C-terminal M001_011925 IPR005905 D-alanine--D-alanine ligase M001_011925 IPR013815 ATP-grasp fold, subdomain 1 M001_011935 IPR000889 Glutathione peroxidase M001_011935 IPR029759 Glutathione peroxidase active site M001_011935 IPR029760 Glutathione peroxidase conserved site M001_011935 IPR036249 Thioredoxin-like superfamily M001_011940 IPR001650 Helicase, C-terminal M001_011940 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_011940 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_011940 IPR028622 ATP-dependent RNA helicase RhlE M001_011940 IPR011545 DEAD/DEAH box helicase domain M001_011940 IPR014014 RNA helicase, DEAD-box type, Q motif M001_011940 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_011945 IPR026332 Anaerobilin synthase HutW M001_011945 IPR034505 Anaerobic coproporphyrinogen-III oxidase M001_011945 IPR006638 Elp3/MiaB/NifB M001_011945 IPR023404 Radical SAM, alpha/beta horseshoe M001_011945 IPR007197 Radical SAM M001_011950 IPR004090 Chemotaxis methyl-accepting receptor M001_011950 IPR003660 HAMP domain M001_011950 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_011955 IPR006218 DAHP synthetase I/KDSA M001_011955 IPR013785 Aldolase-type TIM barrel M001_011955 IPR006219 DHAP synthase, class 1 M001_011960 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta M001_011960 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site M001_011960 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase M001_011960 IPR036968 Enolpyruvate transferase domain superfamily M001_011960 IPR001986 Enolpyruvate transferase domain M001_011965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_011965 IPR015424 Pyridoxal phosphate-dependent transferase M001_011965 IPR022278 Phosphoserine aminotransferase M001_011965 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M001_011965 IPR000192 Aminotransferase class V domain M001_011965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_011970 IPR029035 DHS-like NAD/FAD-binding domain superfamily M001_011970 IPR001308 Electron transfer flavoprotein alpha subunit/FixB M001_011970 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal M001_011970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_011970 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site M001_011970 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal M001_011970 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal M001_011975 IPR012255 Electron transfer flavoprotein, beta subunit M001_011975 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site M001_011975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_011975 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal M001_011975 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal M001_011980 IPR036188 FAD/NAD(P)-binding domain superfamily M001_011980 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase M001_011980 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_011985 IPR004488 Magnesium/cobalt transport protein CorA M001_011985 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB M001_011990 IPR021318 Protein of unknown function DUF2919 M001_012000 IPR010835 Protein of unknown function DUF1439 M001_012010 IPR005836 ADP-glucose pyrophosphorylase, conserved site M001_012010 IPR011831 Glucose-1-phosphate adenylyltransferase M001_012010 IPR029044 Nucleotide-diphospho-sugar transferases M001_012010 IPR011004 Trimeric LpxA-like superfamily M001_012010 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial M001_012010 IPR005835 Nucleotidyl transferase domain M001_012015 IPR029787 Nucleotide cyclase M001_012015 IPR001633 EAL domain M001_012015 IPR035919 EAL domain superfamily M001_012015 IPR035965 PAS domain superfamily M001_012015 IPR000160 GGDEF domain M001_012015 IPR005330 MHYT domain M001_012030 IPR029056 Ribokinase-like M001_012030 IPR011611 Carbohydrate kinase PfkB M001_012030 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M001_012040 IPR019772 Ferrochelatase, active site M001_012040 IPR001015 Ferrochelatase M001_012040 IPR033644 Ferrochelatase, C-terminal M001_012040 IPR033659 Ferrochelatase, N-terminal M001_012045 IPR000850 Adenylate kinase/UMP-CMP kinase M001_012045 IPR033690 Adenylate kinase, conserved site M001_012045 IPR007862 Adenylate kinase, active site lid domain M001_012045 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012045 IPR006259 Adenylate kinase subfamily M001_012050 IPR010386 tRNA-hydroxylase MiaE M001_012050 IPR009078 Ferritin-like superfamily M001_012050 IPR012347 Ferritin-like M001_012055 IPR035584 Amidophosphoribosyltransferase, N-terminal M001_012055 IPR000836 Phosphoribosyltransferase domain M001_012055 IPR029055 Nucleophile aminohydrolases, N-terminal M001_012055 IPR017932 Glutamine amidotransferase type 2 domain M001_012055 IPR029057 Phosphoribosyltransferase-like M001_012055 IPR005854 Amidophosphoribosyltransferase M001_012060 IPR003825 Colicin V production, CvpA M001_012070 IPR006195 Aminoacyl-tRNA synthetase, class II M001_012070 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M001_012070 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily M001_012070 IPR015866 Serine-tRNA synthetase, type1, N-terminal M001_012070 IPR033729 Serine-tRNA ligase catalytic core domain M001_012070 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M001_012070 IPR002317 Serine-tRNA ligase, type1 M001_012075 IPR021886 MgsA AAA+ ATPase C-terminal M001_012075 IPR032423 AAA C-terminal domain M001_012075 IPR003959 ATPase, AAA-type, core M001_012075 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal M001_012075 IPR003593 AAA+ ATPase domain M001_012075 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012080 IPR004564 Outer membrane lipoprotein carrier protein LolA-like M001_012080 IPR029046 Lipoprotein localisation LolA/LolB/LppX M001_012080 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria M001_012085 IPR036390 Winged helix DNA-binding domain superfamily M001_012085 IPR025199 DNA translocase FtsK, 4TM region M001_012085 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012085 IPR041027 FtsK alpha domain M001_012085 IPR036388 Winged helix-like DNA-binding domain superfamily M001_012085 IPR002543 FtsK domain M001_012085 IPR018541 FtsK gamma domain M001_012090 IPR011991 ArsR-like helix-turn-helix domain M001_012090 IPR000485 AsnC-type HTH domain M001_012090 IPR019888 Transcription regulator AsnC-type M001_012090 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M001_012090 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M001_012090 IPR036388 Winged helix-like DNA-binding domain superfamily M001_012090 IPR036390 Winged helix DNA-binding domain superfamily M001_012090 IPR011008 Dimeric alpha-beta barrel M001_012095 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M001_012095 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M001_012095 IPR036291 NAD(P)-binding domain superfamily M001_012095 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 M001_012095 IPR008141 Alanine dehydrogenase M001_012100 IPR005982 Thioredoxin reductase M001_012100 IPR036188 FAD/NAD(P)-binding domain superfamily M001_012100 IPR023753 FAD/NAD(P)-binding domain M001_012100 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site M001_012105 IPR000160 GGDEF domain M001_012105 IPR033424 Membrane-associated sensor domain M001_012105 IPR029787 Nucleotide cyclase M001_012110 IPR008816 Glycine zipper 2TM domain M001_012115 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase M001_012115 IPR016181 Acyl-CoA N-acyltransferase M001_012115 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal M001_012120 IPR007472 N-end rule aminoacyl transferase, C-terminal M001_012120 IPR030700 N-end rule aminoacyl transferase M001_012120 IPR016181 Acyl-CoA N-acyltransferase M001_012120 IPR017138 Aspartate/glutamate leucyltransferase M001_012120 IPR007471 N-end aminoacyl transferase, N-terminal M001_012125 IPR012340 Nucleic acid-binding, OB-fold M001_012125 IPR006196 RNA-binding domain, S1, IF1 type M001_012125 IPR004368 Translation initiation factor IF-1 M001_012125 IPR022967 RNA-binding domain, S1 M001_012130 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012130 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA M001_012130 IPR003593 AAA+ ATPase domain M001_012130 IPR004176 Clp, N-terminal M001_012130 IPR036628 Clp, N-terminal domain superfamily M001_012130 IPR018368 ClpA/B, conserved site 1 M001_012130 IPR001270 ClpA/B family M001_012130 IPR041546 ClpA/ClpB, AAA lid domain M001_012130 IPR028299 ClpA/B, conserved site 2 M001_012130 IPR003959 ATPase, AAA-type, core M001_012130 IPR019489 Clp ATPase, C-terminal M001_012135 IPR003769 Adaptor protein ClpS, core M001_012135 IPR022935 ATP-dependent Clp protease adaptor protein ClpS M001_012135 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M001_012140 IPR012340 Nucleic acid-binding, OB-fold M001_012140 IPR012751 CspD, cold shock M001_012140 IPR019844 Cold-shock (CSD) domain M001_012140 IPR002059 Cold-shock protein, DNA-binding M001_012140 IPR011129 Cold shock domain M001_012140 IPR012156 Cold shock, CspA M001_012145 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M001_012145 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site M001_012145 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M001_012145 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase M001_012145 IPR036291 NAD(P)-binding domain superfamily M001_012165 IPR016032 Signal transduction response regulator, C-terminal effector M001_012165 IPR036388 Winged helix-like DNA-binding domain superfamily M001_012165 IPR039420 Transcriptional regulatory protein WalR-like M001_012165 IPR001789 Signal transduction response regulator, receiver domain M001_012165 IPR011006 CheY-like superfamily M001_012165 IPR001867 OmpR/PhoB-type DNA-binding domain M001_012170 IPR003594 Histidine kinase/HSP90-like ATPase M001_012170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_012170 IPR005467 Histidine kinase domain M001_012170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_012170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_012170 IPR003660 HAMP domain M001_012170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_012180 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD M001_012180 IPR016181 Acyl-CoA N-acyltransferase M001_012180 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal M001_012220 IPR003593 AAA+ ATPase domain M001_012220 IPR009057 Homeobox-like domain superfamily M001_012220 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily M001_012220 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012220 IPR010523 Activator of aromatic catabolism M001_012220 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_012220 IPR004096 4-vinyl reductase, 4VR M001_012220 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_012220 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_012220 IPR025944 Sigma-54 interaction domain, conserved site M001_012220 IPR002197 DNA binding HTH domain, Fis-type M001_012225 IPR018368 ClpA/B, conserved site 1 M001_012225 IPR041546 ClpA/ClpB, AAA lid domain M001_012225 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012225 IPR001270 ClpA/B family M001_012225 IPR004176 Clp, N-terminal M001_012225 IPR036628 Clp, N-terminal domain superfamily M001_012225 IPR017729 Type VI secretion system, ATPase ClpV1 M001_012225 IPR003959 ATPase, AAA-type, core M001_012225 IPR003593 AAA+ ATPase domain M001_012225 IPR019489 Clp ATPase, C-terminal M001_012275 IPR002104 Integrase, catalytic domain M001_012275 IPR013762 Integrase-like, catalytic domain superfamily M001_012275 IPR010998 Integrase/recombinase, N-terminal M001_012275 IPR011010 DNA breaking-rejoining enzyme, catalytic core M001_012275 IPR025166 Integrase, DNA-binding domain M001_012275 IPR038488 Integrase, DNA-binding domain superfamily M001_012290 IPR018060 DNA binding HTH domain, AraC-type M001_012290 IPR009057 Homeobox-like domain superfamily M001_012290 IPR018062 HTH domain AraC-type, conserved site M001_012290 IPR020449 Transcription regulator HTH, AraC- type M001_012290 IPR011051 RmlC-like cupin domain superfamily M001_012290 IPR014710 RmlC-like jelly roll fold M001_012290 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily M001_012295 IPR025959 Winged helix-turn helix domain M001_012295 IPR038717 Tc1-like transposase, DDE domain M001_012295 IPR009057 Homeobox-like domain superfamily M001_012295 IPR012337 Ribonuclease H-like superfamily M001_012310 IPR025668 Transposase DDE domain M001_012345 IPR006068 Cation-transporting P-type ATPase, C-terminal M001_012345 IPR004014 Cation-transporting P-type ATPase, N-terminal M001_012345 IPR023299 P-type ATPase, cytoplasmic domain N M001_012345 IPR018303 P-type ATPase, phosphorylation site M001_012345 IPR023298 P-type ATPase, transmembrane domain superfamily M001_012345 IPR006415 P-type ATPase, subfamily IIIB M001_012345 IPR036412 HAD-like superfamily M001_012345 IPR001757 P-type ATPase M001_012345 IPR023214 HAD superfamily M001_012345 IPR008250 P-type ATPase, A domain superfamily M001_012355 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 M001_012355 IPR000847 Transcription regulator HTH, LysR M001_012355 IPR005119 LysR, substrate-binding M001_012355 IPR036390 Winged helix DNA-binding domain superfamily M001_012355 IPR036388 Winged helix-like DNA-binding domain superfamily M001_012360 IPR001123 Amino acid exporter protein, LeuE-type M001_012360 IPR004778 Homoserine/Threonine efflux protein M001_012370 IPR021845 Protein of unknown function DUF3440 M001_012370 IPR002500 Phosphoadenosine phosphosulphate reductase M001_012370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_012375 IPR036086 ParB/Sulfiredoxin superfamily M001_012375 IPR003115 ParB/Sulfiredoxin M001_012395 IPR035919 EAL domain superfamily M001_012395 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M001_012395 IPR001633 EAL domain M001_012405 IPR008490 Transposase InsH, N-terminal M001_012405 IPR002559 Transposase, IS4-like M001_012410 IPR015344 Vibrio cholerae neuraminidase, lectin-like domain M001_012410 IPR036278 Sialidase superfamily M001_012410 IPR026856 Sialidase family M001_012410 IPR011040 Sialidase M001_012410 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily M001_012415 IPR004375 YhcH/YjgK/YiaL family M001_012415 IPR037012 YhcH/YjgK/YiaL superfamily M001_012420 IPR001734 Sodium/solute symporter M001_012420 IPR038377 Sodium/glucose symporter superfamily M001_012425 IPR000600 ROK family M001_012425 IPR023945 N-acetylmannosamine kinase, bacterial M001_012430 IPR011060 Ribulose-phosphate binding barrel M001_012430 IPR013785 Aldolase-type TIM barrel M001_012430 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase M001_012435 IPR001347 Sugar isomerase (SIS) M001_012435 IPR036388 Winged helix-like DNA-binding domain superfamily M001_012435 IPR009057 Homeobox-like domain superfamily M001_012435 IPR000281 Helix-turn-helix protein RpiR M001_012435 IPR035472 RpiR-like, SIS domain M001_012440 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA M001_012440 IPR013785 Aldolase-type TIM barrel M001_012440 IPR020624 Schiff base-forming aldolase, conserved site M001_012440 IPR020625 Schiff base-forming aldolase, active site M001_012440 IPR002220 DapA-like M001_012470 IPR036291 NAD(P)-binding domain superfamily M001_012470 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation M001_012470 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal M001_012470 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily M001_012470 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal M001_012470 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_012470 IPR017476 UDP-glucose/GDP-mannose dehydrogenase M001_012470 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type M001_012475 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB M001_012475 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_012475 IPR015424 Pyridoxal phosphate-dependent transferase M001_012475 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_012475 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase M001_012480 IPR029044 Nucleotide-diphospho-sugar transferases M001_012480 IPR001173 Glycosyltransferase 2-like M001_012480 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase M001_012485 IPR001509 NAD-dependent epimerase/dehydratase M001_012485 IPR005793 Formyl transferase, C-terminal M001_012485 IPR002376 Formyl transferase, N-terminal M001_012485 IPR036477 Formyl transferase, N-terminal domain superfamily M001_012485 IPR011034 Formyl transferase-like, C-terminal domain superfamily M001_012485 IPR036291 NAD(P)-binding domain superfamily M001_012485 IPR021168 Bifunctional polymyxin resistance protein, ArnA M001_012490 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable M001_012490 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel M001_012490 IPR002509 NodB homology domain M001_012495 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase M001_012495 IPR003342 Glycosyl transferase family 39/83 M001_012500 IPR000390 Small multidrug resistance protein family M001_012500 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE M001_012500 IPR000620 EamA domain M001_012505 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF M001_012505 IPR000390 Small multidrug resistance protein family M001_012515 IPR027454 Histone-like protein H-NS, N-terminal M001_012515 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily M001_012515 IPR027444 Histone-like protein H-NS, C-terminal domain M001_012515 IPR001801 Histone-like protein H-NS M001_012525 IPR025048 Protein of unknown function DUF3987) M001_012540 IPR006120 Resolvase, HTH domain M001_012540 IPR006119 Resolvase, N-terminal catalytic domain M001_012540 IPR009057 Homeobox-like domain superfamily M001_012540 IPR006118 Recombinase, conserved site M001_012540 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily M001_012570 IPR001405 Uncharacterised protein family UPF0758 M001_012570 IPR025657 RadC-like JAB domain M001_012570 IPR020891 Uncharacterised protein family UPF0758, conserved site M001_012570 IPR037518 MPN domain M001_012625 IPR009320 Antitoxin CbeA M001_012625 IPR038025 Antitoxin CbeA superfamily M001_012630 IPR011060 Ribulose-phosphate binding barrel M001_012630 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase M001_012630 IPR013785 Aldolase-type TIM barrel M001_012635 IPR003352 Phosphotransferase system, EIIC M001_012635 IPR011055 Duplicated hybrid motif M001_012635 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M001_012635 IPR036878 Glucose permease domain IIB M001_012635 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M001_012635 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M001_012635 IPR011299 PTS system glucose-specific IIBC component M001_012635 IPR001996 Phosphotransferase system, IIB component, type 1 M001_012635 IPR013013 Phosphotransferase system, EIIC component, type 1 M001_012640 IPR009057 Homeobox-like domain superfamily M001_012640 IPR036388 Winged helix-like DNA-binding domain superfamily M001_012640 IPR001347 Sugar isomerase (SIS) M001_012640 IPR000281 Helix-turn-helix protein RpiR M001_012640 IPR035472 RpiR-like, SIS domain M001_012650 IPR036513 STAS domain superfamily M001_012650 IPR002645 STAS domain M001_012650 IPR001902 SLC26A/SulP transporter M001_012650 IPR018045 Sulphate anion transporter, conserved site M001_012650 IPR011547 SLC26A/SulP transporter domain M001_012675 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_012675 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site M001_012675 IPR004589 DNA helicase, ATP-dependent, RecQ type M001_012675 IPR011545 DEAD/DEAH box helicase domain M001_012675 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012675 IPR001650 Helicase, C-terminal M001_012680 IPR020761 Uncharacterised protein family UPF0114, bacteria M001_012680 IPR005134 Uncharacterised protein family UPF0114 M001_012695 IPR036259 MFS transporter superfamily M001_012695 IPR005217 Iron permease FTR1-like M001_012695 IPR004923 Iron permease FTR1/Fip1/EfeU M001_012700 IPR036188 FAD/NAD(P)-binding domain superfamily M001_012700 IPR001613 Flavin amine oxidase M001_012700 IPR002937 Amine oxidase M001_012715 IPR011701 Major facilitator superfamily M001_012715 IPR036259 MFS transporter superfamily M001_012715 IPR020846 Major facilitator superfamily domain M001_012715 IPR004734 Multidrug resistance protein M001_012715 IPR004812 Drug resistance transporter Bcr/CmlA subfamily M001_012720 IPR004680 Citrate transporter-like domain M001_012730 IPR003439 ABC transporter-like M001_012730 IPR017871 ABC transporter, conserved site M001_012730 IPR011924 Lipoprotein releasing system, ATP-binding protein M001_012730 IPR015854 ABC transporter, lipoprotein release, LolD M001_012730 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012730 IPR003593 AAA+ ATPase domain M001_012755 IPR000073 Alpha/beta hydrolase fold-1 M001_012755 IPR029058 Alpha/Beta hydrolase fold M001_012755 IPR026968 3-oxoadipate enol-lactonase 1/2 M001_012775 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily M001_012775 IPR002569 Peptide methionine sulphoxide reductase MsrA M001_012780 IPR016181 Acyl-CoA N-acyltransferase M001_012780 IPR010167 Amino-acid N-acetyltransferase M001_012780 IPR036393 Acetylglutamate kinase-like superfamily M001_012780 IPR033719 N-acetylglutamate synthase, kinase-like domain M001_012780 IPR000182 GNAT domain M001_012780 IPR001048 Aspartate/glutamate/uridylate kinase M001_012785 IPR036393 Acetylglutamate kinase-like superfamily M001_012785 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain M001_012785 IPR001048 Aspartate/glutamate/uridylate kinase M001_012785 IPR005260 Aspartate kinase, monofunctional class M001_012785 IPR001341 Aspartate kinase M001_012785 IPR002912 ACT domain M001_012785 IPR018042 Aspartate kinase, conserved site M001_012795 IPR000917 Sulfatase, N-terminal M001_012795 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_012800 IPR040921 LD-carboxypeptidase, C-terminal M001_012800 IPR040449 LD-carboxypeptidase, N-terminal M001_012800 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal M001_012800 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily M001_012800 IPR003507 Peptidase family S66 M001_012800 IPR029062 Class I glutamine amidotransferase-like M001_012805 IPR037483 YjjU-like M001_012805 IPR002641 Patatin-like phospholipase domain M001_012805 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M001_012810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_012810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_012810 IPR009051 Alpha-helical ferredoxin M001_012810 IPR014259 Sulphite reductase, subunit A M001_012815 IPR017927 FAD-binding domain, ferredoxin reductase-type M001_012815 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain M001_012815 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M001_012815 IPR001433 Oxidoreductase FAD/NAD(P)-binding M001_012815 IPR017938 Riboflavin synthase-like beta-barrel M001_012815 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit M001_012815 IPR014260 Sulphite reductase, subunit B M001_012820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_012820 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily M001_012820 IPR014261 Sulphite reductase, subunit C M001_012820 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain M001_012820 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_012820 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site M001_012820 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain M001_012825 IPR036291 NAD(P)-binding domain superfamily M001_012825 IPR037115 Sirohaem synthase, dimerisation domain superfamily M001_012825 IPR019478 Sirohaem synthase, dimerisation domain M001_012825 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site M001_012825 IPR012409 Sirohaem synthase M001_012825 IPR006367 Sirohaem synthase, N-terminal M001_012825 IPR006366 Uroporphyrin-III C-methyltransferase M001_012825 IPR014776 Tetrapyrrole methylase, subdomain 2 M001_012825 IPR028281 Siroheme synthase, central domain M001_012825 IPR000878 Tetrapyrrole methylase M001_012825 IPR035996 Tetrapyrrole methylase superfamily M001_012825 IPR014777 Tetrapyrrole methylase, subdomain 1 M001_012835 IPR035439 UPF0145 domain superfamily M001_012835 IPR002765 Uncharacterised protein family UPF0145 M001_012840 IPR007730 Sporulation-like domain M001_012840 IPR032898 Cell division protein DedD M001_012840 IPR036680 Sporulation-like domain superfamily M001_012845 IPR004101 Mur ligase, C-terminal M001_012845 IPR036615 Mur ligase, C-terminal domain superfamily M001_012845 IPR013221 Mur ligase, central M001_012845 IPR036565 Mur-like, catalytic domain superfamily M001_012845 IPR018109 Folylpolyglutamate synthetase, conserved site M001_012845 IPR001645 Folylpolyglutamate synthetase M001_012850 IPR041010 Acetyl-coA carboxylase zinc finger domain M001_012850 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal M001_012850 IPR029045 ClpP/crotonase-like domain superfamily M001_012850 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit M001_012850 IPR034733 Acetyl-CoA carboxylase M001_012855 IPR001406 Pseudouridine synthase I, TruA M001_012855 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain M001_012855 IPR020095 Pseudouridine synthase I, TruA, C-terminal M001_012855 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_012865 IPR012080 Aspartate-semialdehyde dehydrogenase M001_012865 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type M001_012865 IPR036291 NAD(P)-binding domain superfamily M001_012865 IPR012280 Semialdehyde dehydrogenase, dimerisation domain M001_012865 IPR000534 Semialdehyde dehydrogenase, NAD-binding M001_012870 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain M001_012870 IPR038251 PdxB, dimerisation domain superfamily M001_012870 IPR020921 Erythronate-4-phosphate dehydrogenase M001_012870 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M001_012870 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_012870 IPR036291 NAD(P)-binding domain superfamily M001_012875 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M001_012875 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M001_012880 IPR013520 Exonuclease, RNase T/DNA polymerase III M001_012880 IPR036397 Ribonuclease H superfamily M001_012880 IPR005987 Ribonuclease T M001_012880 IPR012337 Ribonuclease H-like superfamily M001_012885 IPR032813 Putative Na+/H+ antiporter, N-terminal M001_012885 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal M001_012890 IPR036676 PurM-like, C-terminal domain superfamily M001_012890 IPR036921 PurM-like, N-terminal domain superfamily M001_012890 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily M001_012890 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain M001_012890 IPR010073 Phosphoribosylformylglycinamidine synthase PurL M001_012890 IPR017926 Glutamine amidotransferase M001_012890 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal M001_012890 IPR029062 Class I glutamine amidotransferase-like M001_012890 IPR010918 PurM-like, C-terminal domain M001_012895 IPR008258 Transglycosylase SLT domain 1 M001_012895 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_012895 IPR000189 Prokaryotic transglycosylase, active site M001_012895 IPR023703 Membrane-bound lytic murein transglycosylase F M001_012895 IPR023346 Lysozyme-like domain superfamily M001_012900 IPR010807 Protein of unknown function DUF1407 M001_012900 IPR029037 YfgJ-like M001_012905 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_012905 IPR015946 K homology domain-like, alpha/beta M001_012905 IPR032859 GTPase Der, C-terminal KH-domain-like M001_012905 IPR006073 GTP binding domain M001_012905 IPR016484 GTP-binding protein EngA M001_012905 IPR031166 EngA-type guanine nucleotide-binding (G) domain M001_012905 IPR005225 Small GTP-binding protein domain M001_012910 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily M001_012910 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M001_012910 IPR002372 Pyrrolo-quinoline quinone repeat M001_012910 IPR015943 WD40/YVTN repeat-like-containing domain superfamily M001_012910 IPR017687 Outer membrane protein assembly factor BamB M001_012915 IPR026039 Uncharacterised protein family UPF0070 M001_012915 IPR011990 Tetratricopeptide-like helical domain superfamily M001_012915 IPR018704 Tetratricopeptide repeat-like domain M001_012920 IPR036621 Anticodon-binding domain superfamily M001_012920 IPR015807 Histidine-tRNA ligase M001_012920 IPR006195 Aminoacyl-tRNA synthetase, class II M001_012920 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain M001_012920 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit M001_012920 IPR004154 Anticodon-binding M001_012920 IPR033656 Histidyl-anticodon-binding M001_012930 IPR025194 Domain of unknown function DUF4115 M001_012930 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_012930 IPR023690 Cytoskeleton protein RodZ M001_012930 IPR001387 Cro/C1-type helix-turn-helix domain M001_012940 IPR013785 Aldolase-type TIM barrel M001_012940 IPR027492 Dual-specificity RNA methyltransferase RlmN M001_012940 IPR040072 Methyltransferase (Class A) M001_012940 IPR007197 Radical SAM M001_012940 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr M001_012945 IPR034907 Nucleoside diphosphate kinase-like domain M001_012945 IPR036850 Nucleoside diphosphate kinase-like domain superfamily M001_012945 IPR001564 Nucleoside diphosphate kinase M001_012945 IPR023005 Nucleoside diphosphate kinase, active site M001_012950 IPR001346 Interferon regulatory factor DNA-binding domain M001_012950 IPR008330 Peptidase M17, peptidase B M001_012950 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal M001_012950 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B M001_012955 IPR001346 Interferon regulatory factor DNA-binding domain M001_012955 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal M001_012955 IPR008330 Peptidase M17, peptidase B M001_012955 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B M001_012960 IPR001055 Adrenodoxin M001_012960 IPR036010 2Fe-2S ferredoxin-like superfamily M001_012960 IPR018298 Adrenodoxin, iron-sulphur binding site M001_012960 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria M001_012960 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_012960 IPR012675 Beta-grasp domain superfamily M001_012965 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily M001_012965 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily M001_012965 IPR042039 HscA chaperone, nucleotide-binding domain M001_012965 IPR018181 Heat shock protein 70, conserved site M001_012965 IPR013126 Heat shock protein 70 family M001_012965 IPR010236 ISC system FeS cluster assembly, HscA chaperone M001_012970 IPR004640 Co-chaperone Hsc20 M001_012970 IPR001623 DnaJ domain M001_012970 IPR036869 Chaperone J-domain superfamily M001_012970 IPR036386 HscB, C-terminal domain superfamily M001_012970 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain M001_012975 IPR011302 Iron-binding protein IscA, proteobacteria M001_012975 IPR035903 HesB-like domain superfamily M001_012975 IPR000361 FeS cluster biogenesis M001_012975 IPR017870 FeS cluster insertion, C-terminal, conserved site M001_012975 IPR016092 FeS cluster insertion protein M001_012980 IPR011339 ISC system FeS cluster assembly, IscU scaffold M001_012980 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal M001_012985 IPR010240 Cysteine desulfurase IscS M001_012985 IPR016454 Cysteine desulfurase M001_012985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_012985 IPR015424 Pyridoxal phosphate-dependent transferase M001_012985 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M001_012985 IPR000192 Aminotransferase class V domain M001_012985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_012990 IPR036390 Winged helix DNA-binding domain superfamily M001_012990 IPR036388 Winged helix-like DNA-binding domain superfamily M001_012990 IPR000944 Transcription regulator Rrf2-type M001_012990 IPR030489 Transcription regulator Rrf2-type, conserved site M001_012990 IPR010242 Transcription factor HTH, IscR M001_012995 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M001_012995 IPR001537 tRNA/rRNA methyltransferase, SpoU type M001_012995 IPR004384 RNA methyltransferase TrmJ/LasT M001_012995 IPR029028 Alpha/beta knot methyltransferases M001_013005 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT M001_013005 IPR036527 SCP2 sterol-binding domain superfamily M001_013005 IPR003033 SCP2 sterol-binding domain M001_013005 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 M001_013010 IPR001539 Peptidase U32 M001_013010 IPR036206 Thiamin phosphate synthase superfamily M001_013015 IPR001539 Peptidase U32 M001_013020 IPR023605 Lipoprotein NlpI M001_013020 IPR019734 Tetratricopeptide repeat M001_013020 IPR013105 Tetratricopeptide repeat 2 M001_013020 IPR011990 Tetratricopeptide-like helical domain superfamily M001_013020 IPR013026 Tetratricopeptide repeat-containing domain M001_013030 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M001_013030 IPR005665 Protein-export membrane protein SecF, bacterial M001_013030 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M001_013030 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M001_013035 IPR027398 SecD export protein N-terminal TM domain M001_013035 IPR001036 Acriflavin resistance protein M001_013035 IPR005791 Protein translocase subunit SecD M001_013035 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M001_013035 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M001_013035 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M001_013040 IPR003849 Preprotein translocase YajC M001_013045 IPR004803 tRNA-guanine transglycosylase M001_013045 IPR036511 Queuine tRNA-ribosyltransferase-like M001_013045 IPR002616 tRNA-guanine(15) transglycosylase-like M001_013050 IPR042119 QueA, domain 2 M001_013050 IPR042118 QueA, domain 1 M001_013050 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily M001_013050 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA M001_013055 IPR000644 CBS domain M001_013060 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M001_013060 IPR024706 Peroxiredoxin, AhpC-type M001_013060 IPR017559 Alkyl hydroperoxide reductase subunit C M001_013060 IPR019479 Peroxiredoxin, C-terminal M001_013060 IPR036249 Thioredoxin-like superfamily M001_013060 IPR013766 Thioredoxin domain M001_013065 IPR023753 FAD/NAD(P)-binding domain M001_013065 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site M001_013065 IPR002109 Glutaredoxin M001_013065 IPR012081 Alkyl hydroperoxide reductase subunit F M001_013065 IPR036188 FAD/NAD(P)-binding domain superfamily M001_013065 IPR036249 Thioredoxin-like superfamily M001_013065 IPR012336 Thioredoxin-like fold M001_013110 IPR010129 Type I secretion membrane fusion protein, HlyD family M001_013110 IPR006144 Secretion protein HlyD, conserved site M001_013115 IPR010132 ATPase, type I secretion system, HlyB M001_013115 IPR017871 ABC transporter, conserved site M001_013115 IPR003439 ABC transporter-like M001_013115 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013115 IPR005074 Peptidase C39, bacteriocin processing M001_013115 IPR003593 AAA+ ATPase domain M001_013115 IPR039421 Type I protein exporter M001_013115 IPR036640 ABC transporter type 1, transmembrane domain superfamily M001_013115 IPR011527 ABC transporter type 1, transmembrane domain M001_013115 IPR039395 Peptidase C39-like A M001_013120 IPR039661 ELP3/YhcC M001_013120 IPR006638 Elp3/MiaB/NifB M001_013120 IPR032432 Radical SAM, C-terminal extension M001_013120 IPR023404 Radical SAM, alpha/beta horseshoe M001_013120 IPR007197 Radical SAM M001_013120 IPR005911 Protein YhcC-like M001_013125 IPR013785 Aldolase-type TIM barrel M001_013125 IPR017932 Glutamine amidotransferase type 2 domain M001_013125 IPR002489 Glutamate synthase, alpha subunit, C-terminal M001_013125 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily M001_013125 IPR002932 Glutamate synthase domain M001_013125 IPR029055 Nucleophile aminohydrolases, N-terminal M001_013125 IPR006982 Glutamate synthase, central-N M001_013130 IPR023753 FAD/NAD(P)-binding domain M001_013130 IPR028261 Dihydroprymidine dehydrogenase domain II M001_013130 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_013130 IPR009051 Alpha-helical ferredoxin M001_013130 IPR036188 FAD/NAD(P)-binding domain superfamily M001_013130 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 M001_013140 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_013140 IPR014014 RNA helicase, DEAD-box type, Q motif M001_013140 IPR001650 Helicase, C-terminal M001_013140 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_013140 IPR028622 ATP-dependent RNA helicase RhlE M001_013140 IPR011545 DEAD/DEAH box helicase domain M001_013140 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013155 IPR003373 Ferrous iron transport protein B M001_013155 IPR011640 Ferrous iron transport protein B, C-terminal M001_013155 IPR030389 FeoB-type guanine nucleotide-binding (G) domain M001_013155 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M001_013155 IPR006073 GTP binding domain M001_013155 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013165 IPR001950 SUI1 domain M001_013165 IPR036877 SUI1 domain superfamily M001_013165 IPR005872 Archaeal/bacterial translation initiation factor SUI1 M001_013170 IPR001727 Gdt1 family M001_013205 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013210 IPR032678 tRNA synthetases class I, catalytic domain M001_013210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_013210 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase M001_013210 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR M001_013210 IPR015803 Cysteine-tRNA ligase M001_013210 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M001_013215 IPR029000 Cyclophilin-like domain superfamily M001_013215 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase M001_013215 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site M001_013215 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain M001_013225 IPR010138 UDP-2,3-diacylglucosamine hydrolase M001_013225 IPR029052 Metallo-dependent phosphatase-like M001_013225 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M001_013235 IPR007341 Transglycosylase-associated protein M001_013240 IPR003594 Histidine kinase/HSP90-like ATPase M001_013240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_013240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_013240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_013240 IPR013727 Two-component sensor kinase, N-terminal M001_013240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_013240 IPR005467 Histidine kinase domain M001_013245 IPR039420 Transcriptional regulatory protein WalR-like M001_013245 IPR016032 Signal transduction response regulator, C-terminal effector M001_013245 IPR001867 OmpR/PhoB-type DNA-binding domain M001_013245 IPR001789 Signal transduction response regulator, receiver domain M001_013245 IPR011006 CheY-like superfamily M001_013245 IPR036388 Winged helix-like DNA-binding domain superfamily M001_013260 IPR002823 Protein of unknown function DUF112, transmembrane M001_013270 IPR011931 Tyrosine recombinase XerC M001_013270 IPR004107 Integrase, SAM-like, N-terminal M001_013270 IPR002104 Integrase, catalytic domain M001_013270 IPR011010 DNA breaking-rejoining enzyme, catalytic core M001_013270 IPR023009 Tyrosine recombinase XerC/XerD M001_013270 IPR013762 Integrase-like, catalytic domain superfamily M001_013270 IPR010998 Integrase/recombinase, N-terminal M001_013285 IPR036286 LexA/Signal peptidase-like superfamily M001_013285 IPR001387 Cro/C1-type helix-turn-helix domain M001_013285 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_013285 IPR015927 Peptidase S24/S26A/S26B/S26C M001_013285 IPR039418 LexA-like M001_013300 IPR009679 Bacteriophage 186, CII M001_013340 IPR006073 GTP binding domain M001_013340 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013345 IPR017961 DNA polymerase, Y-family, little finger domain M001_013345 IPR036775 DNA polymerase, Y-family, little finger domain superfamily M001_013345 IPR001126 UmuC domain M001_013345 IPR025188 Domain of unknown function DUF4113 M001_013345 IPR024728 DNA polymerase type-Y, HhH motif M001_013350 IPR015927 Peptidase S24/S26A/S26B/S26C M001_013350 IPR006197 Peptidase S24, LexA-like M001_013350 IPR039418 LexA-like M001_013350 IPR036286 LexA/Signal peptidase-like superfamily M001_013370 IPR006430 Phage portal protein PBSX family M001_013370 IPR030935 Phage portal protein PBSX family, Proteobacteria M001_013420 IPR000962 Zinc finger, DksA/TraR C4-type M001_013420 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M001_013420 IPR020458 Zinc finger, DksA/TraR C4-type conserved site M001_013530 IPR000462 CDP-alcohol phosphatidyltransferase M001_013530 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial M001_013530 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase M001_013535 IPR036876 UVR domain superfamily M001_013535 IPR004791 UvrABC system, subunit C M001_013535 IPR001162 UvrC family homology region M001_013535 IPR038476 UvrC homology region 2 superfamily M001_013535 IPR001943 UVR domain M001_013535 IPR010994 RuvA domain 2-like M001_013535 IPR000305 GIY-YIG endonuclease M001_013535 IPR035901 GIY-YIG endonuclease superfamily M001_013535 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 M001_013540 IPR000792 Transcription regulator LuxR, C-terminal M001_013540 IPR016032 Signal transduction response regulator, C-terminal effector M001_013540 IPR001789 Signal transduction response regulator, receiver domain M001_013540 IPR011006 CheY-like superfamily M001_013545 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase M001_013545 IPR029044 Nucleotide-diphospho-sugar transferases M001_013545 IPR003329 Acylneuraminate cytidylyltransferase M001_013550 IPR005651 Trm112-like M001_013555 IPR003758 Tetraacyldisaccharide 4'-kinase M001_013555 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013560 IPR011527 ABC transporter type 1, transmembrane domain M001_013560 IPR036640 ABC transporter type 1, transmembrane domain superfamily M001_013560 IPR039421 Type I protein exporter M001_013560 IPR003439 ABC transporter-like M001_013560 IPR017871 ABC transporter, conserved site M001_013560 IPR011917 ABC transporter, lipid A export, MsbA M001_013560 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013560 IPR003593 AAA+ ATPase domain M001_013565 IPR004477 ComEC/Rec2-related protein M001_013565 IPR001279 Metallo-beta-lactamase M001_013565 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M001_013565 IPR035681 ComA-like, MBL domain M001_013565 IPR004797 Competence protein ComEC/Rec2 M001_013580 IPR000796 Aspartate/other aminotransferase M001_013580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_013580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_013580 IPR015424 Pyridoxal phosphate-dependent transferase M001_013580 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site M001_013580 IPR004839 Aminotransferase, class I/classII M001_013590 IPR036390 Winged helix DNA-binding domain superfamily M001_013590 IPR036388 Winged helix-like DNA-binding domain superfamily M001_013590 IPR005119 LysR, substrate-binding M001_013590 IPR000847 Transcription regulator HTH, LysR M001_013590 IPR020890 Transcription regulator HTH, HdfR M001_013595 IPR007335 Protein of unknown function DUF413 M001_013600 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria M001_013600 IPR005658 Proteinase inhibitor I11, ecotin M001_013600 IPR036198 Ecotin superfamily M001_013600 IPR027438 Ecotin, C-terminal M001_013605 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily M001_013605 IPR030395 Glycerophosphodiester phosphodiesterase domain M001_013610 IPR031656 Alpha-glycerophosphate oxidase, C-terminal M001_013610 IPR036188 FAD/NAD(P)-binding domain superfamily M001_013610 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase M001_013610 IPR006076 FAD dependent oxidoreductase M001_013610 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily M001_013615 IPR036390 Winged helix DNA-binding domain superfamily M001_013615 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M001_013615 IPR036388 Winged helix-like DNA-binding domain superfamily M001_013615 IPR037171 NagB/RpiA transferase-like M001_013615 IPR014036 DeoR C-terminal sensor domain M001_013615 IPR001034 DeoR-type HTH domain M001_013620 IPR036259 MFS transporter superfamily M001_013620 IPR000849 Sugar phosphate transporter M001_013620 IPR021159 Glycerate/sugar phosphate transporter, conserved site M001_013620 IPR011701 Major facilitator superfamily M001_013620 IPR005267 Glycerol-3-phosphate transporter M001_013620 IPR020846 Major facilitator superfamily domain M001_013625 IPR000425 Major intrinsic protein M001_013625 IPR022357 Major intrinsic protein, conserved site M001_013625 IPR023271 Aquaporin-like M001_013630 IPR005999 Glycerol kinase M001_013630 IPR000577 Carbohydrate kinase, FGGY M001_013630 IPR018485 Carbohydrate kinase, FGGY, C-terminal M001_013630 IPR018483 Carbohydrate kinase, FGGY, conserved site M001_013630 IPR018484 Carbohydrate kinase, FGGY, N-terminal M001_013635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_013635 IPR003660 HAMP domain M001_013635 IPR033479 Double Cache domain 1 M001_013645 IPR000847 Transcription regulator HTH, LysR M001_013645 IPR036390 Winged helix DNA-binding domain superfamily M001_013645 IPR005119 LysR, substrate-binding M001_013645 IPR036388 Winged helix-like DNA-binding domain superfamily M001_013660 IPR002559 Transposase, IS4-like M001_013660 IPR012337 Ribonuclease H-like superfamily M001_013660 IPR024473 Transposase, IS4, N-terminal M001_013670 IPR020471 Aldo/keto reductase M001_013670 IPR023210 NADP-dependent oxidoreductase domain M001_013670 IPR018170 Aldo/keto reductase, conserved site M001_013670 IPR036812 NADP-dependent oxidoreductase domain superfamily M001_013680 IPR011701 Major facilitator superfamily M001_013680 IPR020846 Major facilitator superfamily domain M001_013680 IPR036259 MFS transporter superfamily M001_013685 IPR029039 Flavoprotein-like superfamily M001_013685 IPR003680 Flavodoxin-like fold M001_013700 IPR007801 Uncharacterised protein family UPF0276 M001_013700 IPR036237 Xylose isomerase-like superfamily M001_013720 IPR003317 Cytochrome ubiquinol oxidase subunit 2 M001_013725 IPR002585 Cytochrome ubiquinol oxidase subunit 1 M001_013730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_013730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_013730 IPR015424 Pyridoxal phosphate-dependent transferase M001_013730 IPR036388 Winged helix-like DNA-binding domain superfamily M001_013730 IPR036390 Winged helix DNA-binding domain superfamily M001_013730 IPR000524 Transcription regulator HTH, GntR M001_013730 IPR004839 Aminotransferase, class I/classII M001_013740 IPR007486 Inner membrane protein YebE M001_013740 IPR029024 TerB-like M001_013745 IPR029069 HotDog domain superfamily M001_013745 IPR006683 Thioesterase domain M001_013745 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain M001_013745 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase M001_013750 IPR019630 Protein of unknown function DUF2496, YbaM-related M001_013755 IPR036390 Winged helix DNA-binding domain superfamily M001_013755 IPR000847 Transcription regulator HTH, LysR M001_013755 IPR036388 Winged helix-like DNA-binding domain superfamily M001_013755 IPR005119 LysR, substrate-binding M001_013760 IPR004747 Cyanate transport system protein M001_013760 IPR036259 MFS transporter superfamily M001_013760 IPR020846 Major facilitator superfamily domain M001_013760 IPR011701 Major facilitator superfamily M001_013765 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M001_013765 IPR002942 RNA-binding S4 domain M001_013765 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M001_013765 IPR036986 RNA-binding S4 domain superfamily M001_013765 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_013765 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M001_013765 IPR006145 Pseudouridine synthase, RsuA/RluA M001_013775 IPR022858 Metallothiol transferase FosB M001_013775 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M001_013775 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M001_013775 IPR037523 Vicinal oxygen chelate (VOC) domain M001_013790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_013790 IPR040743 DNA methylase N-terminal domain M001_013790 IPR018117 DNA methylase, C-5 cytosine-specific, active site M001_013790 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site M001_013790 IPR001525 C-5 cytosine methyltransferase M001_013795 IPR011335 Restriction endonuclease type II-like M001_013795 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal M001_013795 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal M001_013795 IPR038365 EcoRII, C-terminal domain superfamily M001_013795 IPR015300 DNA-binding pseudobarrel domain superfamily M001_013800 IPR003667 NqrDE/RnfAE M001_013800 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA M001_013805 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria M001_013805 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_013805 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_013805 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB M001_013805 IPR007202 4Fe-4S domain M001_013810 IPR019554 Soluble ligand binding domain M001_013810 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC M001_013810 IPR026902 RnfC Barrel sandwich hybrid domain M001_013810 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily M001_013810 IPR009051 Alpha-helical ferredoxin M001_013810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_013810 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain M001_013810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_013815 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D M001_013815 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD M001_013820 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG M001_013820 IPR007329 FMN-binding M001_013825 IPR003667 NqrDE/RnfAE M001_013825 IPR010968 Ion-translocating oxidoreductase complex subunit E M001_013830 IPR004035 Endonuclease III, iron-sulphur binding site M001_013830 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif M001_013830 IPR004036 Endonuclease III-like, conserved site-2 M001_013830 IPR005759 Endonuclease III M001_013830 IPR011257 DNA glycosylase M001_013830 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal M001_013830 IPR000445 Helix-hairpin-helix motif M001_013830 IPR003265 HhH-GPD domain M001_013835 IPR018146 Glyoxalase I, conserved site M001_013835 IPR004361 Glyoxalase I M001_013835 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M001_013835 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M001_013835 IPR037523 Vicinal oxygen chelate (VOC) domain M001_013840 IPR036737 OmpA-like domain superfamily M001_013840 IPR006690 Outer membrane protein, OmpA-like, conserved site M001_013840 IPR006665 OmpA-like domain M001_013840 IPR041544 MotY N-terminal domain M001_013875 IPR011673 Protein of unknown function DUF1615 M001_013880 IPR016185 Pre-ATP-grasp domain superfamily M001_013880 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain M001_013880 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily M001_013880 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain M001_013880 IPR006275 Carbamoyl-phosphate synthase, large subunit M001_013880 IPR011607 Methylglyoxal synthase-like domain M001_013880 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain M001_013880 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain M001_013880 IPR011761 ATP-grasp fold M001_013880 IPR036914 Methylglyoxal synthase-like domain superfamily M001_013885 IPR029062 Class I glutamine amidotransferase-like M001_013885 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain M001_013885 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain M001_013885 IPR006274 Carbamoyl-phosphate synthase, small subunit M001_013885 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily M001_013885 IPR017926 Glutamine amidotransferase M001_013890 IPR022664 Dihydrodipicolinate reductase, conserved site M001_013890 IPR023940 Dihydrodipicolinate reductase M001_013890 IPR000846 Dihydrodipicolinate reductase, N-terminal M001_013890 IPR036291 NAD(P)-binding domain superfamily M001_013890 IPR022663 Dihydrodipicolinate reductase, C-terminal M001_013905 IPR002698 5-formyltetrahydrofolate cyclo-ligase M001_013905 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily M001_013905 IPR037171 NagB/RpiA transferase-like M001_013910 IPR004788 Ribose 5-phosphate isomerase, type A M001_013910 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup M001_013910 IPR037171 NagB/RpiA transferase-like M001_013915 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M001_013915 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M001_013915 IPR002912 ACT domain M001_013915 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M001_013915 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_013915 IPR036291 NAD(P)-binding domain superfamily M001_013920 IPR000829 DAGK family M001_013920 IPR033718 Diacylglycerol kinase, prokaryotic M001_013920 IPR036945 Diacylglycerol kinase (DAGK) superfamily M001_013925 IPR006218 DAHP synthetase I/KDSA M001_013925 IPR006219 DHAP synthase, class 1 M001_013925 IPR013785 Aldolase-type TIM barrel M001_013930 IPR000182 GNAT domain M001_013930 IPR024170 Aminoglycoside N6-acetyltransferase M001_013930 IPR016181 Acyl-CoA N-acyltransferase M001_013935 IPR003439 ABC transporter-like M001_013935 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013935 IPR023693 ABC transporter, vitamin B12, BtuD M001_013935 IPR003593 AAA+ ATPase domain M001_013940 IPR000522 ABC transporter, permease protein, BtuC-like M001_013940 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC M001_013940 IPR037294 ABC transporter, BtuC-like M001_013955 IPR001482 Type II/IV secretion system protein M001_013955 IPR003593 AAA+ ATPase domain M001_013955 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013955 IPR006321 Pilus retraction protein PilT M001_013965 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site M001_013965 IPR001608 Alanine racemase, N-terminal M001_013965 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M001_013965 IPR000821 Alanine racemase M001_013965 IPR011079 Alanine racemase, C-terminal M001_013965 IPR029066 PLP-binding barrel M001_013970 IPR022369 Integral membrane protein TerC, riboswitch-linked M001_013970 IPR005496 Integral membrane protein TerC M001_013975 IPR003593 AAA+ ATPase domain M001_013975 IPR003439 ABC transporter-like M001_013975 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M001_013975 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013975 IPR017871 ABC transporter, conserved site M001_013980 IPR003439 ABC transporter-like M001_013980 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_013980 IPR003593 AAA+ ATPase domain M001_013980 IPR017871 ABC transporter, conserved site M001_013980 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M001_013985 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M001_013985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_013985 IPR035906 MetI-like superfamily M001_013990 IPR035906 MetI-like superfamily M001_013990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_013995 IPR030678 Peptide/nickel binding protein, MppA-type M001_013995 IPR000914 Solute-binding protein family 5 domain M001_013995 IPR023765 Solute-binding protein family 5, conserved site M001_013995 IPR039424 Solute-binding protein family 5 M001_014000 IPR002771 Multiple antibiotic resistance (MarC)-related M001_014005 IPR016162 Aldehyde dehydrogenase, N-terminal M001_014005 IPR015590 Aldehyde dehydrogenase domain M001_014005 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M001_014005 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M001_014005 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain M001_014005 IPR039697 Iron-type alcohol dehydrogenase-like M001_014005 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase M001_014005 IPR016161 Aldehyde/histidinol dehydrogenase M001_014005 IPR016163 Aldehyde dehydrogenase, C-terminal M001_014015 IPR026564 Transcriptional regulator TACO1-like, domain 3 M001_014015 IPR029072 YebC-like M001_014015 IPR017856 Integrase-like, N-terminal M001_014015 IPR002876 Transcriptional regulator TACO1-like M001_014020 IPR004115 GAD-like domain superfamily M001_014020 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M001_014020 IPR012340 Nucleic acid-binding, OB-fold M001_014020 IPR029351 GAD domain M001_014020 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M001_014020 IPR006195 Aminoacyl-tRNA synthetase, class II M001_014020 IPR004524 Aspartate-tRNA ligase, type 1 M001_014020 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb M001_014030 IPR036520 UPF0759 superfamily M001_014030 IPR002763 Protein of unknown function DUF72 M001_014035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_014035 IPR005271 Carboxy-S-adenosyl-L-methionine synthase M001_014035 IPR041698 Methyltransferase domain 25 M001_014040 IPR027555 tRNA (mo5U34)-methyltransferase-like M001_014040 IPR010017 tRNA U34 carboxymethyltransferase M001_014040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_014060 IPR019479 Peroxiredoxin, C-terminal M001_014060 IPR036249 Thioredoxin-like superfamily M001_014060 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M001_014060 IPR024706 Peroxiredoxin, AhpC-type M001_014060 IPR013766 Thioredoxin domain M001_014065 IPR000847 Transcription regulator HTH, LysR M001_014065 IPR036388 Winged helix-like DNA-binding domain superfamily M001_014065 IPR036390 Winged helix DNA-binding domain superfamily M001_014065 IPR005119 LysR, substrate-binding M001_014070 IPR038765 Papain-like cysteine peptidase superfamily M001_014070 IPR000064 Endopeptidase, NLPC/P60 domain M001_014080 IPR005119 LysR, substrate-binding M001_014080 IPR036388 Winged helix-like DNA-binding domain superfamily M001_014080 IPR000847 Transcription regulator HTH, LysR M001_014080 IPR011781 D-serine deaminase transcriptional activator M001_014080 IPR036390 Winged helix DNA-binding domain superfamily M001_014085 IPR003474 Gluconate transporter M001_014090 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M001_014090 IPR011780 D-serine ammonia-lyase M001_014090 IPR001926 Pyridoxal-phosphate dependent enzyme M001_014090 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site M001_014100 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic M001_014100 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site M001_014100 IPR024084 Isopropylmalate dehydrogenase-like domain M001_014105 IPR009057 Homeobox-like domain superfamily M001_014105 IPR018062 HTH domain AraC-type, conserved site M001_014105 IPR018060 DNA binding HTH domain, AraC-type M001_014105 IPR020449 Transcription regulator HTH, AraC- type M001_014110 IPR018050 Phosphomannose isomerase, type I, conserved site M001_014110 IPR016305 Mannose-6-phosphate isomerase M001_014110 IPR001250 Mannose-6-phosphate isomerase, type I M001_014110 IPR011051 RmlC-like cupin domain superfamily M001_014110 IPR014710 RmlC-like jelly roll fold M001_014115 IPR003660 HAMP domain M001_014115 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_014120 IPR013014 Phosphotransferase system, EIIC component, type 2 M001_014120 IPR006327 Phosphotransferase system, fructose IIC component M001_014125 IPR012337 Ribonuclease H-like superfamily M001_014125 IPR002559 Transposase, IS4-like M001_014125 IPR024473 Transposase, IS4, N-terminal M001_014140 IPR008523 Protein of unknown function DUF805 M001_014150 IPR009056 Cytochrome c-like domain M001_014150 IPR036909 Cytochrome c-like domain superfamily M001_014150 IPR008168 Cytochrome c, class IC M001_014150 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit M001_014160 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB M001_014160 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site M001_014160 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain M001_014160 IPR023186 Inosine/uridine-preferring nucleoside hydrolase M001_014160 IPR036452 Ribonucleoside hydrolase-like M001_014170 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M001_014170 IPR016162 Aldehyde dehydrogenase, N-terminal M001_014170 IPR016163 Aldehyde dehydrogenase, C-terminal M001_014170 IPR015590 Aldehyde dehydrogenase domain M001_014170 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent M001_014170 IPR016161 Aldehyde/histidinol dehydrogenase M001_014175 IPR013570 Transcription regulator YsiA, C-terminal M001_014175 IPR009057 Homeobox-like domain superfamily M001_014175 IPR001647 DNA-binding HTH domain, TetR-type M001_014175 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M001_014185 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M001_014185 IPR039697 Iron-type alcohol dehydrogenase-like M001_014185 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M001_014205 IPR002528 Multi antimicrobial extrusion protein M001_014215 IPR007420 Protein of unknown function DUF465 M001_014215 IPR038444 DUF465 superfamily M001_014225 IPR035965 PAS domain superfamily M001_014225 IPR005330 MHYT domain M001_014225 IPR000014 PAS domain M001_014225 IPR000160 GGDEF domain M001_014225 IPR029787 Nucleotide cyclase M001_014225 IPR035919 EAL domain superfamily M001_014225 IPR001633 EAL domain M001_014230 IPR007432 Protein of unknown function DUF480 M001_014230 IPR036388 Winged helix-like DNA-binding domain superfamily M001_014230 IPR036390 Winged helix DNA-binding domain superfamily M001_014240 IPR014068 Azurin M001_014240 IPR000923 Blue (type 1) copper domain M001_014240 IPR028871 Blue (type 1) copper protein, binding site M001_014240 IPR008972 Cupredoxin M001_014245 IPR024932 Flavin transferase ApbE M001_014245 IPR003374 ApbE-like superfamily M001_014245 IPR042159 Flavin-trafficking protein ApbE M001_014260 IPR005135 Endonuclease/exonuclease/phosphatase M001_014260 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M001_014260 IPR020848 AP endonuclease 1, conserved site M001_014260 IPR037493 Exodeoxyribonuclease III-like M001_014260 IPR020847 AP endonuclease 1, binding site M001_014260 IPR004808 AP endonuclease 1 M001_014265 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_014265 IPR006143 RND efflux pump, membrane fusion protein M001_014270 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_014270 IPR001036 Acriflavin resistance protein M001_014270 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 M001_014295 IPR042117 OMPP1/FadL/TodX superfamily M001_014295 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M001_014305 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_014305 IPR006143 RND efflux pump, membrane fusion protein M001_014310 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_014310 IPR001036 Acriflavin resistance protein M001_014310 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA M001_014325 IPR003593 AAA+ ATPase domain M001_014325 IPR017871 ABC transporter, conserved site M001_014325 IPR003439 ABC transporter-like M001_014325 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_014330 IPR037294 ABC transporter, BtuC-like M001_014330 IPR000522 ABC transporter, permease protein, BtuC-like M001_014335 IPR037294 ABC transporter, BtuC-like M001_014335 IPR000522 ABC transporter, permease protein, BtuC-like M001_014340 IPR017927 FAD-binding domain, ferredoxin reductase-type M001_014340 IPR039374 Siderophore-interacting protein M001_014340 IPR013113 FAD-binding 9, siderophore-interacting M001_014340 IPR017938 Riboflavin synthase-like beta-barrel M001_014340 IPR007037 Siderophore-interacting protein, C-terminal domain M001_014340 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M001_014345 IPR001789 Signal transduction response regulator, receiver domain M001_014345 IPR011006 CheY-like superfamily M001_014345 IPR021800 Domain of unknown function DUF3369 M001_014345 IPR003607 HD/PDEase domain M001_014345 IPR037522 HD-GYP domain M001_014355 IPR036397 Ribonuclease H superfamily M001_014355 IPR013520 Exonuclease, RNase T/DNA polymerase III M001_014355 IPR006309 DNA polymerase 3, epsilon subunit M001_014355 IPR012337 Ribonuclease H-like superfamily M001_014355 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain M001_014360 IPR002156 Ribonuclease H domain M001_014360 IPR022892 Ribonuclease HI M001_014360 IPR012337 Ribonuclease H-like superfamily M001_014360 IPR036397 Ribonuclease H superfamily M001_014365 IPR026669 Arsenite methyltransferase-like M001_014365 IPR013216 Methyltransferase type 11 M001_014365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_014370 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M001_014370 IPR001279 Metallo-beta-lactamase M001_014370 IPR017782 Hydroxyacylglutathione hydrolase M001_014370 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain M001_014370 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain M001_014375 IPR023346 Lysozyme-like domain superfamily M001_014375 IPR036779 LysM domain superfamily M001_014375 IPR008258 Transglycosylase SLT domain 1 M001_014375 IPR000189 Prokaryotic transglycosylase, active site M001_014375 IPR018392 LysM domain M001_014380 IPR016681 Succinylglutamate desuccinylase M001_014380 IPR007036 Succinylglutamate desuccinylase/aspartoacylase M001_014390 IPR008865 DNA replication terminus site-binding protein M001_014390 IPR036384 Replication terminator Tus superfamily M001_014390 IPR036381 Replication terminator Tus, domain 1 M001_014395 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_014395 IPR038718 SNF2-like, N-terminal domain superfamily M001_014395 IPR000330 SNF2-related, N-terminal domain M001_014395 IPR007527 Zinc finger, SWIM-type M001_014395 IPR001650 Helicase, C-terminal M001_014395 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_014400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_014400 IPR005467 Histidine kinase domain M001_014400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_014400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_014400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_014400 IPR003594 Histidine kinase/HSP90-like ATPase M001_014400 IPR003660 HAMP domain M001_014405 IPR001867 OmpR/PhoB-type DNA-binding domain M001_014405 IPR036388 Winged helix-like DNA-binding domain superfamily M001_014405 IPR039420 Transcriptional regulatory protein WalR-like M001_014405 IPR011006 CheY-like superfamily M001_014405 IPR001789 Signal transduction response regulator, receiver domain M001_014410 IPR006143 RND efflux pump, membrane fusion protein M001_014410 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M001_014415 IPR001036 Acriflavin resistance protein M001_014415 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_014415 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 M001_014485 IPR001826 RHS protein M001_014485 IPR022385 Rhs repeat-associated core M001_014485 IPR031325 RHS repeat M001_014485 IPR006530 YD repeat M001_014520 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset M001_014520 IPR037026 Vgr protein, OB-fold domain superfamily M001_014520 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein M001_014520 IPR006531 Gp5 N-terminal M001_014525 IPR008514 Type VI secretion system effector, Hcp M001_014525 IPR036624 Hcp1-like superfamily M001_014540 IPR038063 L,D-transpeptidase catalytic domain-like M001_014540 IPR041597 L,D-transpeptidase C-terminal domain M001_014540 IPR018392 LysM domain M001_014540 IPR005490 L,D-transpeptidase catalytic domain M001_014550 IPR001898 Solute carrier family 13 M001_014550 IPR031312 Sodium/sulphate symporter, conserved site M001_014555 IPR029069 HotDog domain superfamily M001_014555 IPR002539 MaoC-like dehydratase domain M001_014555 IPR039375 Nodulation protein N-like M001_014560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_014560 IPR016909 Ribosomal RNA large subunit methyltransferase F M001_014560 IPR010286 METTL16/RlmF family M001_014565 IPR038765 Papain-like cysteine peptidase superfamily M001_014565 IPR000064 Endopeptidase, NLPC/P60 domain M001_014570 IPR008278 4'-phosphopantetheinyl transferase domain M001_014570 IPR037143 4'-phosphopantetheinyl transferase domain superfamily M001_014575 IPR036249 Thioredoxin-like superfamily M001_014575 IPR013766 Thioredoxin domain M001_014575 IPR011990 Tetratricopeptide-like helical domain superfamily M001_014585 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M001_014585 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB M001_014590 IPR002912 ACT domain M001_014590 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain M001_014590 IPR002376 Formyl transferase, N-terminal M001_014590 IPR036477 Formyl transferase, N-terminal domain superfamily M001_014590 IPR004810 Formyltetrahydrofolate deformylase M001_014600 IPR001736 Phospholipase D/Transphosphatidylase M001_014600 IPR022924 Cardiolipin synthase M001_014600 IPR030840 Cardiolipin synthase A M001_014600 IPR025202 Phospholipase D-like domain M001_014600 IPR027379 Cardiolipin synthase N-terminal M001_014615 IPR002559 Transposase, IS4-like M001_014615 IPR012337 Ribonuclease H-like superfamily M001_014615 IPR024473 Transposase, IS4, N-terminal M001_014620 IPR008258 Transglycosylase SLT domain 1 M001_014620 IPR011055 Duplicated hybrid motif M001_014620 IPR023346 Lysozyme-like domain superfamily M001_014620 IPR016047 Peptidase M23 M001_014620 IPR010090 Phage tail tape measure protein M001_014620 IPR000189 Prokaryotic transglycosylase, active site M001_014625 IPR000425 Major intrinsic protein M001_014625 IPR034294 Aquaporin transporter M001_014625 IPR023271 Aquaporin-like M001_014625 IPR022357 Major intrinsic protein, conserved site M001_014625 IPR023743 Aquaporin Z M001_014635 IPR015424 Pyridoxal phosphate-dependent transferase M001_014635 IPR004839 Aminotransferase, class I/classII M001_014635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_014635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_014640 IPR018385 C4-dicarboxylate anaerobic carrier-like M001_014645 IPR010758 Trans-2-enoyl-CoA reductase M001_014645 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative M001_014645 IPR024906 Enoyl reductase FAD binding domain M001_014650 IPR004090 Chemotaxis methyl-accepting receptor M001_014650 IPR000727 Target SNARE coiled-coil homology domain M001_014650 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_014650 IPR003660 HAMP domain M001_014650 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M001_014655 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site M001_014655 IPR023086 Phosphoglycerate mutase, GpmB, probable M001_014655 IPR013078 Histidine phosphatase superfamily, clade-1 M001_014655 IPR029033 Histidine phosphatase superfamily M001_014660 IPR039446 Transcriptional regulator DauR-like M001_014660 IPR013559 YheO-like M001_014660 IPR039445 Transcriptional regulator DauR-like, HTH domain M001_014665 IPR005130 Serine dehydratase-like, alpha subunit M001_014665 IPR021144 Uncharacterised protein family UPF0597 M001_014670 IPR035959 RutC-like superfamily M001_014670 IPR019897 RidA, conserved site M001_014670 IPR006175 YjgF/YER057c/UK114 family M001_014670 IPR006056 RidA family M001_014680 IPR000727 Target SNARE coiled-coil homology domain M001_014680 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_014680 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M001_014680 IPR003660 HAMP domain M001_014680 IPR004090 Chemotaxis methyl-accepting receptor M001_014695 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal M001_014695 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site M001_014695 IPR000183 Ornithine/DAP/Arg decarboxylase M001_014695 IPR002985 Arginine decarboxylase M001_014695 IPR029066 PLP-binding barrel M001_014695 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M001_014695 IPR041128 Arginine decarboxylase, C-terminal helical M001_014695 IPR040634 Arginine decarboxylase, helical bundle domain M001_014700 IPR002933 Peptidase M20 M001_014700 IPR011650 Peptidase M20, dimerisation domain M001_014700 IPR036264 Bacterial exopeptidase dimerisation domain M001_014700 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M001_014700 IPR010161 Peptidase M20B, tripeptide aminopeptidase M001_014715 IPR000043 Adenosylhomocysteinase-like M001_014715 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site M001_014715 IPR036291 NAD(P)-binding domain superfamily M001_014715 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M001_014715 IPR042172 Adenosylhomocysteinase-like superfamily M001_014725 IPR023480 Uncharacterised protein family UPF0312/YceI M001_014725 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily M001_014725 IPR007372 Lipid/polyisoprenoid-binding, YceI-like M001_014730 IPR036388 Winged helix-like DNA-binding domain superfamily M001_014730 IPR000847 Transcription regulator HTH, LysR M001_014730 IPR005119 LysR, substrate-binding M001_014730 IPR036390 Winged helix DNA-binding domain superfamily M001_014740 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_014740 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site M001_014740 IPR000559 Formate-tetrahydrofolate ligase, FTHFS M001_014745 IPR004090 Chemotaxis methyl-accepting receptor M001_014745 IPR033480 Single Cache domain 2 M001_014745 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_014745 IPR003660 HAMP domain M001_014750 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_014750 IPR003660 HAMP domain M001_014755 IPR018234 GTP cyclohydrolase I, conserved site M001_014755 IPR001474 GTP cyclohydrolase I M001_014755 IPR020602 GTP cyclohydrolase I domain M001_014760 IPR036688 MoeA, C-terminal, domain IV superfamily M001_014760 IPR005111 MoeA, C-terminal, domain IV M001_014760 IPR038987 Molybdopterin biosynthesis protein MoeA-like M001_014760 IPR008284 Molybdenum cofactor biosynthesis, conserved site M001_014760 IPR001453 MoaB/Mog domain M001_014760 IPR036425 MoaB/Mog-like domain superfamily M001_014760 IPR036135 MoeA, N-terminal and linker domain superfamily M001_014760 IPR005110 MoeA, N-terminal and linker domain M001_014765 IPR035985 Ubiquitin-activating enzyme M001_014765 IPR012730 Molybdopterin synthase sulfurylase MoeB M001_014765 IPR000594 THIF-type NAD/FAD binding fold M001_014775 IPR009440 Plasmid segregation protein ParM/StbA M001_014775 IPR042051 ParM-like M001_014780 IPR029058 Alpha/Beta hydrolase fold M001_014780 IPR000073 Alpha/beta hydrolase fold-1 M001_014785 IPR011868 Molybdate ABC transporter, ATP-binding protein M001_014785 IPR017871 ABC transporter, conserved site M001_014785 IPR008995 Molybdate/tungstate binding, C-terminal M001_014785 IPR005116 Transport-associated OB, type 1 M001_014785 IPR003439 ABC transporter-like M001_014785 IPR004606 Molybdenum-pterin binding M001_014785 IPR003593 AAA+ ATPase domain M001_014785 IPR015852 ABC transporter, molybdenum import, ModC M001_014785 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_014790 IPR011867 Molybdate ABC transporter, permease protein M001_014790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_014790 IPR035906 MetI-like superfamily M001_014795 IPR005950 Molybdate ABC transporter, substrate-binding protein M001_014800 IPR003448 Molybdopterin biosynthesis MoaE M001_014800 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily M001_014805 IPR003749 Sulfur carrier ThiS/MoaD-like M001_014805 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M001_014805 IPR012675 Beta-grasp domain superfamily M001_014810 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain M001_014810 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily M001_014810 IPR023045 Molybdenum cofactor biosynthesis C M001_014815 IPR012245 Molybdenum cofactor biosynthesis protein MoaB M001_014815 IPR036425 MoaB/Mog-like domain superfamily M001_014815 IPR001453 MoaB/Mog domain M001_014815 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria M001_014815 IPR008284 Molybdenum cofactor biosynthesis, conserved site M001_014820 IPR005126 NapC/NirT cytochrome c, N-terminal M001_014820 IPR038266 NapC/NirT cytochrome c superfamily M001_014820 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT M001_014820 IPR011031 Multihaem cytochrome M001_014820 IPR036280 Multiheme cytochrome superfamily M001_014820 IPR024717 Denitrification system component NapC/NirT/NrfH M001_014825 IPR036280 Multiheme cytochrome superfamily M001_014825 IPR011031 Multihaem cytochrome M001_014825 IPR005591 Nitrate reductase cytochrome c-type subunit NapB M001_014830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_014830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_014830 IPR011886 Ferredoxin-type protein, NapH/MauN family M001_014835 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_014835 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M001_014835 IPR004494 MauM/NapG ferredoxin-type protein M001_014835 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_014840 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M001_014840 IPR006311 Twin-arginine translocation pathway, signal sequence M001_014840 IPR010051 Periplasmic nitrate reductase, large subunit M001_014840 IPR009010 Aspartate decarboxylase-like domain superfamily M001_014840 IPR006657 Molybdopterin dinucleotide-binding domain M001_014840 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site M001_014840 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M001_014840 IPR006656 Molybdopterin oxidoreductase M001_014840 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain M001_014850 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_014850 IPR004496 Ferredoxin-type protein NapF M001_014850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_014855 IPR006638 Elp3/MiaB/NifB M001_014855 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site M001_014855 IPR010505 Molybdenum cofactor synthesis C-terminal M001_014855 IPR013483 Molybdenum cofactor biosynthesis protein A M001_014855 IPR007197 Radical SAM M001_014855 IPR013785 Aldolase-type TIM barrel M001_014860 IPR003660 HAMP domain M001_014860 IPR003594 Histidine kinase/HSP90-like ATPase M001_014860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_014860 IPR005467 Histidine kinase domain M001_014860 IPR029095 NarX-like, N-terminal M001_014860 IPR042295 NarX-like, N-terminal domain superfamily M001_014860 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing M001_014860 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain M001_014865 IPR011006 CheY-like superfamily M001_014865 IPR000792 Transcription regulator LuxR, C-terminal M001_014865 IPR001789 Signal transduction response regulator, receiver domain M001_014865 IPR016032 Signal transduction response regulator, C-terminal effector M001_014875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_014875 IPR011006 CheY-like superfamily M001_014875 IPR001789 Signal transduction response regulator, receiver domain M001_014875 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_014875 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal M001_014875 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_014875 IPR038388 RcsC, C-terminal domain superfamily M001_014875 IPR030856 Sensor histidine kinase RcsC M001_014875 IPR005467 Histidine kinase domain M001_014875 IPR003594 Histidine kinase/HSP90-like ATPase M001_014875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_014885 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 M001_014885 IPR010119 Gluconeogenesis factor M001_014885 IPR038136 Gluconeogenesis factor superfamily M001_014895 IPR002559 Transposase, IS4-like M001_014895 IPR024473 Transposase, IS4, N-terminal M001_014895 IPR012337 Ribonuclease H-like superfamily M001_014900 IPR029055 Nucleophile aminohydrolases, N-terminal M001_014900 IPR026869 Putative glutamine amidotransferase type 2 M001_014900 IPR017932 Glutamine amidotransferase type 2 domain M001_014905 IPR001347 Sugar isomerase (SIS) M001_014905 IPR035461 GmhA/DiaA M001_014905 IPR004515 Phosphoheptose isomerase M001_014910 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal M001_014910 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain M001_014910 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type M001_014910 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily M001_014910 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal M001_014910 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily M001_014910 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal M001_014915 IPR036264 Bacterial exopeptidase dimerisation domain M001_014915 IPR011650 Peptidase M20, dimerisation domain M001_014915 IPR017439 Amidohydrolase M001_014915 IPR002933 Peptidase M20 M001_014915 IPR033845 p-Aminobenzoyl-glutamate hydrolase subunit A M001_014920 IPR024473 Transposase, IS4, N-terminal M001_014920 IPR002559 Transposase, IS4-like M001_014920 IPR012337 Ribonuclease H-like superfamily M001_014930 IPR023393 START-like domain superfamily M001_014930 IPR005031 Coenzyme Q-binding protein COQ10, START domain M001_014935 IPR000037 SsrA-binding protein M001_014935 IPR020081 SsrA-binding protein, conserved site M001_014935 IPR023620 Small protein B M001_014945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_014945 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal M001_014945 IPR001789 Signal transduction response regulator, receiver domain M001_014945 IPR030856 Sensor histidine kinase RcsC M001_014945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_014945 IPR011006 CheY-like superfamily M001_014945 IPR003594 Histidine kinase/HSP90-like ATPase M001_014945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_014945 IPR005467 Histidine kinase domain M001_014945 IPR038388 RcsC, C-terminal domain superfamily M001_014945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_014950 IPR000160 GGDEF domain M001_014950 IPR029787 Nucleotide cyclase M001_014950 IPR001633 EAL domain M001_014950 IPR035919 EAL domain superfamily M001_014950 IPR005330 MHYT domain M001_014955 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_014955 IPR036010 2Fe-2S ferredoxin-like superfamily M001_014955 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding M001_014955 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M001_014955 IPR006656 Molybdopterin oxidoreductase M001_014955 IPR006657 Molybdopterin dinucleotide-binding domain M001_014955 IPR006478 Formate dehydrogenase, alpha subunit M001_014955 IPR041924 Formate dehydrogenase H, N-terminal M001_014955 IPR009010 Aspartate decarboxylase-like domain superfamily M001_014955 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_014955 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_014970 IPR033396 Domain of unknown function DUF5107 M001_014970 IPR013026 Tetratricopeptide repeat-containing domain M001_014970 IPR019734 Tetratricopeptide repeat M001_014970 IPR011990 Tetratricopeptide-like helical domain superfamily M001_014975 IPR000600 ROK family M001_014975 IPR036388 Winged helix-like DNA-binding domain superfamily M001_014975 IPR036390 Winged helix DNA-binding domain superfamily M001_014985 IPR003141 Polymerase/histidinol phosphatase, N-terminal M001_014985 IPR023710 Probable phosphatase YcdX M001_014985 IPR016195 Polymerase/histidinol phosphatase-like M001_014990 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M001_014990 IPR009057 Homeobox-like domain superfamily M001_014990 IPR001647 DNA-binding HTH domain, TetR-type M001_014995 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain M001_014995 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily M001_014995 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily M001_014995 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal M001_014995 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal M001_014995 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal M001_014995 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type M001_015000 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M001_015000 IPR001036 Acriflavin resistance protein M001_015000 IPR023931 Multidrug resistance protein MdtC M001_015010 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site M001_015010 IPR036397 Ribonuclease H superfamily M001_015010 IPR002176 Crossover junction endodeoxyribonuclease RuvC M001_015010 IPR012337 Ribonuclease H-like superfamily M001_015015 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE M001_015015 IPR012842 Type III secretion system HrpE/YscL M001_015020 IPR009510 Type III secretion system, secretion protein K M001_015025 IPR006182 Secretory protein YscJ/FliF M001_015025 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ M001_015030 IPR012670 Type III secretion system, YscI/HrpB M001_015035 IPR041814 Type III secretion system virulence factor YopR, core domain M001_015035 IPR013349 Type III secretion system effector YopR M001_015040 IPR013348 Type III secretion system YscG M001_015040 IPR011990 Tetratricopeptide-like helical domain superfamily M001_015045 IPR011841 Type III secretion system, needle protein M001_015045 IPR021123 Type III secretion, needle-protein-like M001_015045 IPR037203 Type III secretion, needle-protein-like superfamily M001_015055 IPR008984 SMAD/FHA domain superfamily M001_015055 IPR032034 Yop protein translocation protein D, periplasmic domain M001_015055 IPR032030 YscD, cytoplasmic domain M001_015055 IPR012843 Type III secretion system YscD/HrpQ M001_015055 IPR000253 Forkhead-associated (FHA) domain M001_015060 IPR004846 Type II/III secretion system M001_015060 IPR005644 NolW-like M001_015060 IPR038591 NolW-like superfamily M001_015060 IPR003522 Type III secretion system outer membrane pore YscC/HrcC M001_015060 IPR004845 Type II secretion system GspD, conserved site M001_015065 IPR013353 Type III secretion system chaperone YscB M001_015065 IPR010261 Tir chaperone protein (CesT) family M001_015075 IPR009057 Homeobox-like domain superfamily M001_015075 IPR020449 Transcription regulator HTH, AraC- type M001_015075 IPR014710 RmlC-like jelly roll fold M001_015075 IPR018062 HTH domain AraC-type, conserved site M001_015075 IPR018060 DNA binding HTH domain, AraC-type M001_015080 IPR039366 YscW/ExsB M001_015090 IPR010261 Tir chaperone protein (CesT) family M001_015095 IPR008898 YopD-like M001_015100 IPR006972 Secretion system effector C, SseC-like M001_015105 IPR013026 Tetratricopeptide repeat-containing domain M001_015105 IPR011716 Tetratricopeptide TPR-3 M001_015105 IPR011990 Tetratricopeptide-like helical domain superfamily M001_015105 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup M001_015105 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M001_015110 IPR036139 Virulence-associated V antigen superfamily M001_015110 IPR005413 Low calcium response V antigen M001_015115 IPR009863 Type III secretion protein, LcrG M001_015120 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 M001_015120 IPR013405 Type III secretion system regulator, LcrR M001_015125 IPR042194 FHIPEP, domain 1 M001_015125 IPR042193 FHIPEP, domain 3 M001_015125 IPR006302 Type III secretion protein HrcV M001_015125 IPR001712 Type III secretion system FHIPEP M001_015125 IPR025505 FHIPEP conserved site M001_015125 IPR042196 FHIPEP, domain 4 M001_015135 IPR012672 Type III secretion system YscX M001_015140 IPR012673 Type III secretion system chaperone SycN M001_015145 IPR015144 Type III secretion system effector delivery regulator TyeA M001_015145 IPR013351 Type III secretion system effector delivery regulator TyeA-related M001_015145 IPR038347 TyeA superfamily M001_015150 IPR010812 Hypersensitivity response secretion-like, HrpJ M001_015150 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC M001_015155 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M001_015155 IPR005714 ATPase, type III secretion system, FliI/YscN M001_015155 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M001_015155 IPR003593 AAA+ ATPase domain M001_015155 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015155 IPR040627 T3SS EscN ATPase, C-terminal M001_015155 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M001_015155 IPR013380 ATPase, type III secretion system, H+-transporting M001_015165 IPR021136 Flagellar hook-length control protein-like, C-terminal M001_015165 IPR013354 Type III secretion system needle length determinant, C-terminal domain M001_015170 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO M001_015170 IPR003283 Type III secretion system outer membrane, SpaO M001_015170 IPR036429 SpoA-like superfamily M001_015170 IPR001543 Surface presentation of antigen (SpoA) M001_015175 IPR005773 Yop virulence translocation protein R M001_015175 IPR005838 Type III secretion system inner membrane P protein M001_015180 IPR006306 Type III secretion protein HrpO M001_015180 IPR002191 Bacterial export protein family 3 M001_015185 IPR006304 Type III secretion protein SpaR/YscT M001_015185 IPR002010 Type III secretion system inner membrane R protein M001_015190 IPR006135 Type III secretion system substrate exporter M001_015190 IPR006307 Type III exporter system, secretion apparatus protein BsaZ M001_015190 IPR029025 Type III secretion system substrate exporter, C-terminal M001_015195 IPR003540 ADP ribosyltransferase M001_015205 IPR027619 Putative C-S lyase M001_015205 IPR004839 Aminotransferase, class I/classII M001_015205 IPR015424 Pyridoxal phosphate-dependent transferase M001_015205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_015205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_015210 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M001_015210 IPR011301 PTS system, maltose/glucose-specific IIBC component M001_015210 IPR003352 Phosphotransferase system, EIIC M001_015210 IPR013013 Phosphotransferase system, EIIC component, type 1 M001_015210 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M001_015210 IPR036878 Glucose permease domain IIB M001_015210 IPR001996 Phosphotransferase system, IIB component, type 1 M001_015215 IPR000843 LacI-type HTH domain M001_015215 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_015215 IPR001761 Periplasmic binding protein/LacI sugar binding domain M001_015215 IPR028082 Periplasmic binding protein-like I M001_015225 IPR000182 GNAT domain M001_015225 IPR016181 Acyl-CoA N-acyltransferase M001_015250 IPR023188 DNA-binding protein Dps, conserved site M001_015250 IPR012347 Ferritin-like M001_015250 IPR009078 Ferritin-like superfamily M001_015250 IPR008331 Ferritin/DPS protein domain M001_015250 IPR002177 DNA-binding protein Dps M001_015275 IPR036095 PTS system IIB component-like superfamily M001_015275 IPR002178 PTS EIIA type-2 domain M001_015275 IPR013011 Phosphotransferase system, EIIB component, type 2 M001_015275 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M001_015275 IPR003352 Phosphotransferase system, EIIC M001_015275 IPR013014 Phosphotransferase system, EIIC component, type 2 M001_015275 IPR004715 Phosphotransferase system, IIA component fructose subfamily M001_015275 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M001_015275 IPR006327 Phosphotransferase system, fructose IIC component M001_015275 IPR016152 Phosphotransferase/anion transporter M001_015280 IPR036259 MFS transporter superfamily M001_015280 IPR021159 Glycerate/sugar phosphate transporter, conserved site M001_015280 IPR000849 Sugar phosphate transporter M001_015280 IPR011701 Major facilitator superfamily M001_015280 IPR020846 Major facilitator superfamily domain M001_015285 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M001_015285 IPR036095 PTS system IIB component-like superfamily M001_015285 IPR013011 Phosphotransferase system, EIIB component, type 2 M001_015285 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M001_015295 IPR006145 Pseudouridine synthase, RsuA/RluA M001_015295 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M001_015295 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M001_015295 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_015295 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M001_015300 IPR000086 NUDIX hydrolase domain M001_015300 IPR033713 Phosphatase NudJ M001_015300 IPR015797 NUDIX hydrolase-like domain superfamily M001_015300 IPR020476 NUDIX hydrolase M001_015300 IPR020084 NUDIX hydrolase, conserved site M001_015305 IPR004506 tRNA-specific 2-thiouridylase M001_015305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_015305 IPR023382 Adenine nucleotide alpha hydrolase-like domains M001_015310 IPR035932 HflD-like superfamily M001_015310 IPR007451 High frequency lysogenization protein HflD M001_015315 IPR024083 Fumarase/histidase, N-terminal M001_015315 IPR020557 Fumarate lyase, conserved site M001_015315 IPR004769 Adenylosuccinate lyase M001_015315 IPR000362 Fumarate lyase family M001_015315 IPR022761 Fumarate lyase, N-terminal M001_015315 IPR008948 L-Aspartase-like M001_015315 IPR013539 Adenylosuccinate lyase PurB, C-terminal M001_015320 IPR039994 JmjC domain-containing M001_015320 IPR003347 JmjC domain M001_015325 IPR024473 Transposase, IS4, N-terminal M001_015325 IPR002559 Transposase, IS4-like M001_015325 IPR012337 Ribonuclease H-like superfamily M001_015345 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M001_015345 IPR034330 Glutathione S-transferases, class Zeta , C-terminal M001_015345 IPR005955 Glutathione S-transferases, class Zeta M001_015345 IPR004045 Glutathione S-transferase, N-terminal M001_015345 IPR040079 Glutathione Transferase family M001_015345 IPR034333 Glutathione S-transferases, class Zeta , N-terminal M001_015345 IPR010987 Glutathione S-transferase, C-terminal-like M001_015345 IPR036249 Thioredoxin-like superfamily M001_015350 IPR000659 Pyridoxamine 5'-phosphate oxidase M001_015350 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site M001_015350 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative M001_015350 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal M001_015350 IPR012349 FMN-binding split barrel M001_015385 IPR035926 NusB-like superfamily M001_015385 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site M001_015385 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type M001_015385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_015385 IPR004573 rRNA small subunit methyltransferase B M001_015385 IPR023267 RNA (C5-cytosine) methyltransferase M001_015385 IPR006027 NusB/RsmB/TIM44 M001_015390 IPR035959 RutC-like superfamily M001_015390 IPR006175 YjgF/YER057c/UK114 family M001_015390 IPR019897 RidA, conserved site M001_015390 IPR006056 RidA family M001_015395 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M001_015395 IPR004184 Pyruvate formate lyase domain M001_015395 IPR001150 Glycine radical domain M001_015395 IPR005949 Formate acetyltransferase M001_015400 IPR024917 Propionate kinase M001_015400 IPR000890 Aliphatic acid kinase, short-chain M001_015400 IPR004372 Acetate/propionate kinase M001_015400 IPR023865 Aliphatic acid kinase, short-chain, conserved site M001_015405 IPR018227 Amino acid/polyamine transporter 2 M001_015405 IPR023726 Threonine/serine transporter TdcC M001_015405 IPR004694 Hydroxy amino acid transporter M001_015410 IPR001926 Pyridoxal-phosphate dependent enzyme M001_015410 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site M001_015410 IPR005789 Threonine dehydratase, catabolic M001_015410 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M001_015415 IPR036249 Thioredoxin-like superfamily M001_015415 IPR014434 Monothiol glutaredoxin M001_015415 IPR033658 Glutaredoxin, PICOT-like M001_015415 IPR002109 Glutaredoxin M001_015415 IPR004480 Monothiol glutaredoxin-related M001_015420 IPR019833 Manganese/iron superoxide dismutase, binding site M001_015420 IPR001189 Manganese/iron superoxide dismutase M001_015420 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily M001_015420 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily M001_015420 IPR019832 Manganese/iron superoxide dismutase, C-terminal M001_015420 IPR019831 Manganese/iron superoxide dismutase, N-terminal M001_015425 IPR007428 MlaA lipoprotein M001_015435 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M001_015435 IPR005616 CcmH/CycL/Ccl2/NrfF family M001_015435 IPR011990 Tetratricopeptide-like helical domain superfamily M001_015435 IPR019734 Tetratricopeptide repeat M001_015435 IPR013026 Tetratricopeptide repeat-containing domain M001_015440 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE M001_015440 IPR013740 Redoxin M001_015440 IPR036249 Thioredoxin-like superfamily M001_015440 IPR017937 Thioredoxin, conserved site M001_015440 IPR013766 Thioredoxin domain M001_015445 IPR003567 Cytochrome c-type biogenesis protein M001_015445 IPR002541 Cytochrome c assembly protein M001_015445 IPR003568 Cytochrome c-type biogenesis protein CcmF M001_015445 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal M001_015450 IPR004329 CcmE/CycJ protein M001_015450 IPR036127 CcmE-like superfamily M001_015455 IPR007078 Haem exporter protein D (CcmD) M001_015460 IPR002541 Cytochrome c assembly protein M001_015460 IPR003557 Cytochrome c-type biogenesis protein CcmC M001_015465 IPR003544 Cytochrome c-type biogenesis protein CcmB M001_015465 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria M001_015470 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015470 IPR005895 ABC transporter, haem export, CcmA M001_015470 IPR017871 ABC transporter, conserved site M001_015470 IPR003439 ABC transporter-like M001_015470 IPR003593 AAA+ ATPase domain M001_015480 IPR002545 CheW-like domain M001_015480 IPR039315 Chemotaxis protein CheW M001_015480 IPR036061 CheW-like domain superfamily M001_015490 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015490 IPR025669 AAA domain M001_015495 IPR036737 OmpA-like domain superfamily M001_015495 IPR006665 OmpA-like domain M001_015495 IPR025713 Motility protein B, N-terminal domain M001_015500 IPR002898 MotA/TolQ/ExbB proton channel M001_015500 IPR000540 Flagellar motor protein MotA, conserved site M001_015505 IPR035909 Methylesterase CheB, C-terminal M001_015505 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type M001_015505 IPR011006 CheY-like superfamily M001_015505 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase M001_015505 IPR001789 Signal transduction response regulator, receiver domain M001_015510 IPR004105 Histidine kinase CheA-like, homodimeric domain M001_015510 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily M001_015510 IPR036061 CheW-like domain superfamily M001_015510 IPR002545 CheW-like domain M001_015510 IPR011006 CheY-like superfamily M001_015510 IPR003594 Histidine kinase/HSP90-like ATPase M001_015510 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_015510 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_015510 IPR036641 HPT domain superfamily M001_015510 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_015510 IPR005467 Histidine kinase domain M001_015510 IPR001789 Signal transduction response regulator, receiver domain M001_015510 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_015515 IPR007439 Chemotaxis phosphatase, CheZ M001_015520 IPR001789 Signal transduction response regulator, receiver domain M001_015520 IPR011006 CheY-like superfamily M001_015525 IPR014284 RNA polymerase sigma-70 like domain M001_015525 IPR013325 RNA polymerase sigma factor, region 2 M001_015525 IPR012845 RNA polymerase sigma factor, FliA/WhiG M001_015525 IPR007630 RNA polymerase sigma-70 region 4 M001_015525 IPR007624 RNA polymerase sigma-70 region 3 M001_015525 IPR007627 RNA polymerase sigma-70 region 2 M001_015525 IPR000943 RNA polymerase sigma-70 M001_015525 IPR028617 RNA polymerase sigma factor FliA M001_015525 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_015530 IPR025501 ATP binding protein MinD M001_015530 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015530 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M001_015535 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M001_015535 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015535 IPR020006 Flagellar biosynthesis protein FlhF M001_015535 IPR003593 AAA+ ATPase domain M001_015540 IPR001712 Type III secretion system FHIPEP M001_015540 IPR025505 FHIPEP conserved site M001_015540 IPR042196 FHIPEP, domain 4 M001_015540 IPR042193 FHIPEP, domain 3 M001_015540 IPR042194 FHIPEP, domain 1 M001_015540 IPR006301 Flagellar biosynthesis protein FlhA M001_015545 IPR006136 Flagellar biosynthetic protein FlhB M001_015545 IPR006135 Type III secretion system substrate exporter M001_015545 IPR029025 Type III secretion system substrate exporter, C-terminal M001_015550 IPR006303 Flagellar biosynthesis protein FliR M001_015550 IPR002010 Type III secretion system inner membrane R protein M001_015555 IPR002191 Bacterial export protein family 3 M001_015555 IPR006305 Flagellar biosynthesis protein FliQ M001_015560 IPR005837 Flagellar transport protein FliP M001_015560 IPR005838 Type III secretion system inner membrane P protein M001_015565 IPR022781 Flagellar biosynthesis protein, FliO M001_015570 IPR001543 Surface presentation of antigen (SpoA) M001_015570 IPR036429 SpoA-like superfamily M001_015570 IPR012826 Flagellar motor switch FliN M001_015570 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb M001_015575 IPR001543 Surface presentation of antigen (SpoA) M001_015575 IPR028976 CheC-like superfamily M001_015575 IPR001689 Flagellar motor switch protein FliM M001_015575 IPR036429 SpoA-like superfamily M001_015595 IPR040627 T3SS EscN ATPase, C-terminal M001_015595 IPR020005 Flagellar export ATPase FliI, clade 1 M001_015595 IPR005714 ATPase, type III secretion system, FliI/YscN M001_015595 IPR003593 AAA+ ATPase domain M001_015595 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M001_015595 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M001_015595 IPR032463 ATPase, type III secretion system, FliI M001_015595 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015605 IPR000090 Flagellar motor switch protein FliG M001_015605 IPR023087 Flagellar motor switch protein FliG, C-terminal M001_015605 IPR011002 Flagellar motor switch protein FliG, alpha-helical M001_015605 IPR032779 Flagellar motor switch protein FliG, middle domain M001_015605 IPR028263 Flagellar motor switch protein FliG, N-terminal domain M001_015610 IPR013556 Flagellar M-ring C-terminal M001_015610 IPR000067 Flagellar M-ring protein FliF M001_015610 IPR006182 Secretory protein YscJ/FliF M001_015615 IPR001624 Flagellar hook-basal body complex protein FliE M001_015625 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_015625 IPR013108 Amidohydrolase 3 M001_015625 IPR032466 Metal-dependent hydrolase M001_015635 IPR015806 Pyruvate kinase, insert domain superfamily M001_015635 IPR015793 Pyruvate kinase, barrel M001_015635 IPR011037 Pyruvate kinase-like, insert domain superfamily M001_015635 IPR040442 Pyruvate kinase-like domain superfamily M001_015635 IPR015795 Pyruvate kinase, C-terminal M001_015635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_015635 IPR036918 Pyruvate kinase, C-terminal domain superfamily M001_015635 IPR018209 Pyruvate kinase, active site M001_015635 IPR001697 Pyruvate kinase M001_015640 IPR035472 RpiR-like, SIS domain M001_015640 IPR000281 Helix-turn-helix protein RpiR M001_015640 IPR001347 Sugar isomerase (SIS) M001_015640 IPR036388 Winged helix-like DNA-binding domain superfamily M001_015640 IPR009057 Homeobox-like domain superfamily M001_015645 IPR003836 Glucokinase M001_015670 IPR003660 HAMP domain M001_015670 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_015670 IPR004090 Chemotaxis methyl-accepting receptor M001_015675 IPR018313 Solute-binding protein family 3, conserved site M001_015675 IPR001320 Ionotropic glutamate receptor M001_015675 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M001_015675 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_015680 IPR006043 Xanthine/uracil/vitamin C permease M001_015680 IPR006042 Xanthine/uracil permease M001_015680 IPR029935 Uracil permease M001_015690 IPR032635 Surface antigen domain M001_015690 IPR016364 Surface antigen, Rickettsia type M001_015690 IPR008816 Glycine zipper 2TM domain M001_015695 IPR023667 NAD-dependent malic enzyme, proteobacteria M001_015695 IPR015884 Malic enzyme, conserved site M001_015695 IPR036291 NAD(P)-binding domain superfamily M001_015695 IPR012301 Malic enzyme, N-terminal domain M001_015695 IPR037062 Malic enzyme, N-terminal domain superfamily M001_015695 IPR012302 Malic enzyme, NAD-binding M001_015695 IPR001891 Malic oxidoreductase M001_015715 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_015715 IPR000813 7Fe ferredoxin M001_015715 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_015720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_015720 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_015720 IPR036010 2Fe-2S ferredoxin-like superfamily M001_015720 IPR006478 Formate dehydrogenase, alpha subunit M001_015720 IPR036010 2Fe-2S ferredoxin-like superfamily M001_015720 IPR041924 Formate dehydrogenase H, N-terminal M001_015720 IPR009010 Aspartate decarboxylase-like domain superfamily M001_015720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_015720 IPR006657 Molybdopterin dinucleotide-binding domain M001_015720 IPR006656 Molybdopterin oxidoreductase M001_015720 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_015720 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding M001_015720 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M001_015720 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding M001_015720 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M001_015720 IPR006656 Molybdopterin oxidoreductase M001_015720 IPR006657 Molybdopterin dinucleotide-binding domain M001_015720 IPR006478 Formate dehydrogenase, alpha subunit M001_015720 IPR041924 Formate dehydrogenase H, N-terminal M001_015720 IPR009010 Aspartate decarboxylase-like domain superfamily M001_015720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_015720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_015755 IPR016193 Cytidine deaminase-like M001_015755 IPR003786 Sulfur carrier protein FdhD M001_015765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_015765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_015765 IPR000014 PAS domain M001_015765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_015765 IPR000700 PAS-associated, C-terminal M001_015765 IPR013767 PAS fold M001_015765 IPR035965 PAS domain superfamily M001_015765 IPR005467 Histidine kinase domain M001_015765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_015765 IPR003660 HAMP domain M001_015765 IPR003594 Histidine kinase/HSP90-like ATPase M001_015770 IPR009057 Homeobox-like domain superfamily M001_015770 IPR002197 DNA binding HTH domain, Fis-type M001_015770 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015770 IPR001789 Signal transduction response regulator, receiver domain M001_015770 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_015770 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_015770 IPR011006 CheY-like superfamily M001_015770 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_015770 IPR025944 Sigma-54 interaction domain, conserved site M001_015770 IPR003593 AAA+ ATPase domain M001_015775 IPR024370 PBP domain M001_015780 IPR035906 MetI-like superfamily M001_015780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_015785 IPR030921 LPS export ABC transporter, ATP-binding protein LptB M001_015785 IPR003593 AAA+ ATPase domain M001_015785 IPR017871 ABC transporter, conserved site M001_015785 IPR003439 ABC transporter-like M001_015785 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015790 IPR029044 Nucleotide-diphospho-sugar transferases M001_015790 IPR025877 MobA-like NTP transferase M001_015790 IPR013482 Molybdenum cofactor guanylyltransferase M001_015795 IPR008284 Molybdenum cofactor biosynthesis, conserved site M001_015795 IPR001453 MoaB/Mog domain M001_015795 IPR005111 MoeA, C-terminal, domain IV M001_015795 IPR036688 MoeA, C-terminal, domain IV superfamily M001_015795 IPR005110 MoeA, N-terminal and linker domain M001_015795 IPR036135 MoeA, N-terminal and linker domain superfamily M001_015795 IPR036425 MoaB/Mog-like domain superfamily M001_015795 IPR038987 Molybdopterin biosynthesis protein MoeA-like M001_015800 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein M001_015805 IPR037522 HD-GYP domain M001_015805 IPR003607 HD/PDEase domain M001_015815 IPR004090 Chemotaxis methyl-accepting receptor M001_015815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_015815 IPR000700 PAS-associated, C-terminal M001_015815 IPR001610 PAC motif M001_015815 IPR000014 PAS domain M001_015815 IPR013655 PAS fold-3 M001_015815 IPR035965 PAS domain superfamily M001_015820 IPR000182 GNAT domain M001_015820 IPR016181 Acyl-CoA N-acyltransferase M001_015835 IPR036237 Xylose isomerase-like superfamily M001_015835 IPR007801 Uncharacterised protein family UPF0276 M001_015845 IPR019663 Uncharacterised protein YbfA M001_015865 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_015865 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_015865 IPR015387 LuxQ, periplasmic M001_015865 IPR035965 PAS domain superfamily M001_015865 IPR011006 CheY-like superfamily M001_015865 IPR005467 Histidine kinase domain M001_015865 IPR001789 Signal transduction response regulator, receiver domain M001_015865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_015865 IPR003594 Histidine kinase/HSP90-like ATPase M001_015865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_015865 IPR029151 Periplasmic sensor-like domain superfamily M001_015870 IPR030678 Peptide/nickel binding protein, MppA-type M001_015870 IPR023765 Solute-binding protein family 5, conserved site M001_015870 IPR000914 Solute-binding protein family 5 domain M001_015870 IPR039424 Solute-binding protein family 5 M001_015875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_015875 IPR035906 MetI-like superfamily M001_015880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_015880 IPR035906 MetI-like superfamily M001_015880 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M001_015885 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015885 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M001_015885 IPR017871 ABC transporter, conserved site M001_015885 IPR003439 ABC transporter-like M001_015885 IPR003593 AAA+ ATPase domain M001_015890 IPR003593 AAA+ ATPase domain M001_015890 IPR003439 ABC transporter-like M001_015890 IPR017871 ABC transporter, conserved site M001_015890 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_015890 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M001_015900 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type M001_015905 IPR029018 Beta-hexosaminidase-like, domain 2 M001_015905 IPR017853 Glycoside hydrolase superfamily M001_015905 IPR015883 Glycoside hydrolase family 20, catalytic domain M001_015905 IPR025705 Beta-hexosaminidase M001_015905 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M001_015910 IPR004090 Chemotaxis methyl-accepting receptor M001_015910 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_015910 IPR003660 HAMP domain M001_015910 IPR000014 PAS domain M001_015910 IPR035965 PAS domain superfamily M001_015910 IPR013655 PAS fold-3 M001_015910 IPR001610 PAC motif M001_015925 IPR013498 DNA topoisomerase, type IA, zn finger M001_015925 IPR013497 DNA topoisomerase, type IA, central M001_015925 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M001_015925 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M001_015925 IPR023406 DNA topoisomerase, type IA, active site M001_015925 IPR000380 DNA topoisomerase, type IA M001_015925 IPR006171 TOPRIM domain M001_015925 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M001_015925 IPR023405 DNA topoisomerase, type IA, core domain M001_015925 IPR003602 DNA topoisomerase, type IA, DNA-binding domain M001_015925 IPR028612 DNA topoisomerase I, type IA M001_015925 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type M001_015925 IPR005733 DNA topoisomerase I, bacterial-type M001_015925 IPR034149 DNA topoisomerase 1, TOPRIM domain M001_015925 IPR003601 DNA topoisomerase, type IA, domain 2 M001_015930 IPR007079 Succinylarginine dihydrolase M001_015930 IPR037031 Succinylarginine dihydrolase superfamily M001_015960 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_015960 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_015970 IPR003787 Sulphur relay, DsrE/F-like protein M001_015970 IPR027396 DsrEFH-like M001_015975 IPR009050 Globin-like superfamily M001_015975 IPR000160 GGDEF domain M001_015975 IPR029787 Nucleotide cyclase M001_015975 IPR039435 Diguanylate cyclase DosC, globin sensor domain M001_015975 IPR012292 Globin/Protoglobin M001_015980 IPR036259 MFS transporter superfamily M001_015980 IPR005829 Sugar transporter, conserved site M001_015980 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG M001_015980 IPR020846 Major facilitator superfamily domain M001_015980 IPR011701 Major facilitator superfamily M001_015985 IPR029045 ClpP/crotonase-like domain superfamily M001_015985 IPR002142 Peptidase S49 M001_015985 IPR013703 Peptidase S49, N-terminal proteobacteria M001_015990 IPR036291 NAD(P)-binding domain superfamily M001_015990 IPR002347 Short-chain dehydrogenase/reductase SDR M001_015990 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_015995 IPR000847 Transcription regulator HTH, LysR M001_015995 IPR036388 Winged helix-like DNA-binding domain superfamily M001_015995 IPR036390 Winged helix DNA-binding domain superfamily M001_015995 IPR005119 LysR, substrate-binding M001_016000 IPR020846 Major facilitator superfamily domain M001_016000 IPR011701 Major facilitator superfamily M001_016000 IPR004750 Sugar efflux M001_016000 IPR036259 MFS transporter superfamily M001_016005 IPR015424 Pyridoxal phosphate-dependent transferase M001_016005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_016005 IPR004839 Aminotransferase, class I/classII M001_016005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_016005 IPR027619 Putative C-S lyase M001_016025 IPR008914 Phosphatidylethanolamine-binding protein M001_016025 IPR036610 PEBP-like superfamily M001_016025 IPR005247 YbhB/YbcL M001_016035 IPR008928 Six-hairpin glycosidase superfamily M001_016035 IPR001661 Glycoside hydrolase, family 37 M001_016035 IPR012341 Six-hairpin glycosidase-like superfamily M001_016045 IPR036895 Uracil-DNA glycosylase-like domain superfamily M001_016045 IPR002043 Uracil-DNA glycosylase family 1 M001_016045 IPR005122 Uracil-DNA glycosylase-like M001_016045 IPR018085 Uracil-DNA glycosylase, active site M001_016055 IPR011140 Autonomous glycyl radical cofactor GrcA M001_016055 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M001_016055 IPR001150 Glycine radical domain M001_016060 IPR023954 C4-dicarboxylate transport protein M001_016060 IPR001991 Sodium:dicarboxylate symporter M001_016060 IPR018107 Sodium:dicarboxylate symporter, conserved site M001_016060 IPR036458 Sodium:dicarboxylate symporter superfamily M001_016065 IPR006269 3-deoxy-8-phosphooctulonate synthase M001_016065 IPR006218 DAHP synthetase I/KDSA M001_016065 IPR013785 Aldolase-type TIM barrel M001_016070 IPR032698 Protein SirB1, N-terminal M001_016070 IPR011990 Tetratricopeptide-like helical domain superfamily M001_016080 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific M001_016080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_016080 IPR004556 Methyltransferase HemK-like M001_016080 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_016080 IPR040758 Release factor glutamine methyltransferase, N-terminal domain M001_016080 IPR025714 Methyltransferase domain M001_016085 IPR004373 Peptide chain release factor 1 M001_016085 IPR005139 Peptide chain release factor M001_016085 IPR000352 Peptide chain release factor class I M001_016090 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase M001_016090 IPR036291 NAD(P)-binding domain superfamily M001_016090 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily M001_016090 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily M001_016090 IPR018214 Glutamyl-tRNA reductase, conserved site M001_016090 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal M001_016090 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain M001_016090 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase M001_016095 IPR004565 Outer membrane lipoprotein LolB M001_016095 IPR029046 Lipoprotein localisation LolA/LolB/LppX M001_016100 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_016100 IPR020568 Ribosomal protein S5 domain 2-type fold M001_016100 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase M001_016100 IPR006204 GHMP kinase N-terminal domain M001_016100 IPR036554 GHMP kinase, C-terminal domain superfamily M001_016100 IPR013750 GHMP kinase, C-terminal domain M001_016110 IPR005946 Ribose-phosphate pyrophosphokinase M001_016110 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type M001_016110 IPR029057 Phosphoribosyltransferase-like M001_016110 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site M001_016110 IPR000836 Phosphoribosyltransferase domain M001_016110 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain M001_016115 IPR006146 5'-Nucleotidase, conserved site M001_016115 IPR008334 5'-Nucleotidase, C-terminal M001_016115 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN M001_016115 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M001_016115 IPR006179 5'-Nucleotidase/apyrase M001_016115 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M001_016115 IPR029052 Metallo-dependent phosphatase-like M001_016120 IPR018171 Peptidyl-tRNA hydrolase, conserved site M001_016120 IPR036416 Peptidyl-tRNA hydrolase superfamily M001_016120 IPR001328 Peptidyl-tRNA hydrolase M001_016125 IPR012676 TGS-like M001_016125 IPR041706 YchF, N-terminal M001_016125 IPR023192 TGS-like domain superfamily M001_016125 IPR013029 YchF, C-terminal domain M001_016125 IPR031167 OBG-type guanine nucleotide-binding (G) domain M001_016125 IPR012675 Beta-grasp domain superfamily M001_016125 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_016125 IPR006073 GTP binding domain M001_016125 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 M001_016125 IPR004095 TGS M001_016170 IPR031312 Sodium/sulphate symporter, conserved site M001_016170 IPR006037 Regulator of K+ conductance, C-terminal M001_016170 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M001_016170 IPR004680 Citrate transporter-like domain M001_016175 IPR006419 Nicotinamide mononucleotide transporter PnuC M001_016180 IPR035994 Nucleoside phosphorylase superfamily M001_016180 IPR018016 Nucleoside phosphorylase, conserved site M001_016180 IPR000845 Nucleoside phosphorylase domain M001_016180 IPR010058 Uridine phosphorylase M001_016195 IPR029058 Alpha/Beta hydrolase fold M001_016195 IPR013094 Alpha/beta hydrolase fold-3 M001_016205 IPR001623 DnaJ domain M001_016205 IPR036869 Chaperone J-domain superfamily M001_016210 IPR013126 Heat shock protein 70 family M001_016210 IPR042030 Chaperone protein HscC, nucleotide-binding domain M001_016210 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily M001_016210 IPR018181 Heat shock protein 70, conserved site M001_016220 IPR012769 Trehalose-6-phosphate hydrolase M001_016220 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) M001_016220 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_016220 IPR013780 Glycosyl hydrolase, all-beta M001_016220 IPR017853 Glycoside hydrolase superfamily M001_016225 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M001_016225 IPR029061 Thiamin diphosphate-binding fold M001_016225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_016225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_016225 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II M001_016225 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal M001_016225 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M001_016225 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily M001_016225 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain M001_016225 IPR011895 Pyruvate-flavodoxin oxidoreductase M001_016225 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain M001_016225 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain M001_016230 IPR011701 Major facilitator superfamily M001_016230 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG M001_016230 IPR036388 Winged helix-like DNA-binding domain superfamily M001_016230 IPR005829 Sugar transporter, conserved site M001_016230 IPR036259 MFS transporter superfamily M001_016230 IPR036390 Winged helix DNA-binding domain superfamily M001_016230 IPR020846 Major facilitator superfamily domain M001_016235 IPR010976 Beta-phosphoglucomutase hydrolase M001_016235 IPR006439 HAD hydrolase, subfamily IA M001_016235 IPR036412 HAD-like superfamily M001_016235 IPR023214 HAD superfamily M001_016235 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_016235 IPR041492 Haloacid dehalogenase-like hydrolase M001_016250 IPR016160 Aldehyde dehydrogenase, cysteine active site M001_016250 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M001_016250 IPR017649 Succinylglutamate-semialdehyde dehydrogenase M001_016250 IPR015590 Aldehyde dehydrogenase domain M001_016250 IPR016162 Aldehyde dehydrogenase, N-terminal M001_016250 IPR016163 Aldehyde dehydrogenase, C-terminal M001_016250 IPR016161 Aldehyde/histidinol dehydrogenase M001_016255 IPR016181 Acyl-CoA N-acyltransferase M001_016255 IPR007041 Arginine N-succinyltransferase AstA/AruG M001_016255 IPR017650 Arginine N-succinyltransferase M001_016260 IPR004636 Acetylornithine/Succinylornithine transaminase family M001_016260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_016260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_016260 IPR015424 Pyridoxal phosphate-dependent transferase M001_016260 IPR005814 Aminotransferase class-III M001_016260 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria M001_016265 IPR029062 Class I glutamine amidotransferase-like M001_016265 IPR017926 Glutamine amidotransferase M001_016265 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain M001_016275 IPR002305 Aminoacyl-tRNA synthetase, class Ic M001_016275 IPR002306 Tryptophan-tRNA ligase M001_016275 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_016275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_016275 IPR024109 Tryptophan-tRNA ligase, bacterial-type M001_016280 IPR006439 HAD hydrolase, subfamily IA M001_016280 IPR041492 Haloacid dehalogenase-like hydrolase M001_016280 IPR023214 HAD superfamily M001_016280 IPR036412 HAD-like superfamily M001_016280 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic M001_016280 IPR037512 Phosphoglycolate phosphatase, prokaryotic M001_016280 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_016285 IPR026019 Ribulose-phosphate 3-epimerase M001_016285 IPR013785 Aldolase-type TIM barrel M001_016285 IPR000056 Ribulose-phosphate 3-epimerase-like M001_016285 IPR011060 Ribulose-phosphate binding barrel M001_016290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_016290 IPR012327 D12 class N6 adenine-specific DNA methyltransferase M001_016290 IPR012263 Adenine modification methylase, M.EcoRV-type M001_016290 IPR023095 Adenine-specific methyltransferase, domain 2 M001_016290 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_016300 IPR030963 3-dehydroquinate synthase family M001_016300 IPR030960 3-dehydroquinate synthase domain M001_016300 IPR016037 3-dehydroquinate synthase AroB M001_016305 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_016305 IPR031322 Shikimate kinase/gluconokinase M001_016305 IPR000623 Shikimate kinase/Threonine synthase-like 1 M001_016305 IPR023000 Shikimate kinase, conserved site M001_016310 IPR004846 Type II/III secretion system M001_016310 IPR021731 AMIN domain M001_016310 IPR001775 GspD/PilQ family M001_016310 IPR005644 NolW-like M001_016310 IPR038591 NolW-like superfamily M001_016310 IPR013355 Type IV pilus secretin PilQ M001_016310 IPR011662 Secretin/TonB, short N-terminal domain M001_016310 IPR004845 Type II secretion system GspD, conserved site M001_016335 IPR001460 Penicillin-binding protein, transpeptidase M001_016335 IPR031376 Penicillin-binding protein, OB-like domain M001_016335 IPR012338 Beta-lactamase/transpeptidase-like M001_016335 IPR001264 Glycosyl transferase, family 51 M001_016335 IPR023346 Lysozyme-like domain superfamily M001_016335 IPR036950 Penicillin binding protein transglycosylase domain M001_016340 IPR000847 Transcription regulator HTH, LysR M001_016340 IPR005119 LysR, substrate-binding M001_016340 IPR036388 Winged helix-like DNA-binding domain superfamily M001_016340 IPR036390 Winged helix DNA-binding domain superfamily M001_016345 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_016345 IPR004090 Chemotaxis methyl-accepting receptor M001_016345 IPR003660 HAMP domain M001_016360 IPR000847 Transcription regulator HTH, LysR M001_016360 IPR036390 Winged helix DNA-binding domain superfamily M001_016360 IPR036388 Winged helix-like DNA-binding domain superfamily M001_016360 IPR005119 LysR, substrate-binding M001_016370 IPR016047 Peptidase M23 M001_016370 IPR011055 Duplicated hybrid motif M001_016370 IPR018392 LysM domain M001_016370 IPR013731 Opacity-associated protein A, N-terminal M001_016380 IPR024393 Mechanosensitive ion channel MscS, porin domain M001_016380 IPR006686 Mechanosensitive ion channel MscS, conserved site M001_016380 IPR025692 Mechanosensitive ion channel inner membrane domain 1 M001_016380 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 M001_016380 IPR023408 Mechanosensitive ion channel MscS domain superfamily M001_016380 IPR011066 Mechanosensitive ion channel MscS, C-terminal M001_016380 IPR006685 Mechanosensitive ion channel MscS M001_016380 IPR010920 LSM domain superfamily M001_016385 IPR030395 Glycerophosphodiester phosphodiesterase domain M001_016385 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily M001_016390 IPR004090 Chemotaxis methyl-accepting receptor M001_016390 IPR003660 HAMP domain M001_016390 IPR033479 Double Cache domain 1 M001_016390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_016390 IPR000727 Target SNARE coiled-coil homology domain M001_016390 IPR029151 Periplasmic sensor-like domain superfamily M001_016395 IPR005884 Fumarate reductase, flavoprotein subunit M001_016395 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily M001_016395 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site M001_016395 IPR036188 FAD/NAD(P)-binding domain superfamily M001_016395 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal M001_016395 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit M001_016395 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily M001_016395 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain M001_016400 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal M001_016400 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site M001_016400 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M001_016400 IPR036010 2Fe-2S ferredoxin-like superfamily M001_016400 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein M001_016400 IPR009051 Alpha-helical ferredoxin M001_016400 IPR012675 Beta-grasp domain superfamily M001_016400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_016400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_016405 IPR003510 Fumarate reductase, subunit C M001_016405 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit M001_016410 IPR003418 Fumarate reductase, subunit D M001_016410 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit M001_016415 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M001_016420 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M001_016425 IPR011650 Peptidase M20, dimerisation domain M001_016425 IPR008007 Peptidase M42 M001_016425 IPR002933 Peptidase M20 M001_016425 IPR010162 Peptidase M20B, peptidase T-like M001_016425 IPR036264 Bacterial exopeptidase dimerisation domain M001_016425 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M001_016435 IPR009351 Protein of unknown function DUF1006 M001_016440 IPR001647 DNA-binding HTH domain, TetR-type M001_016440 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M001_016440 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal M001_016440 IPR009057 Homeobox-like domain superfamily M001_016450 IPR006076 FAD dependent oxidoreductase M001_016450 IPR036188 FAD/NAD(P)-binding domain superfamily M001_016465 IPR042099 AMP-dependent synthetase-like superfamily M001_016465 IPR000873 AMP-dependent synthetase/ligase M001_016465 IPR020845 AMP-binding, conserved site M001_016475 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_016475 IPR036291 NAD(P)-binding domain superfamily M001_016475 IPR002347 Short-chain dehydrogenase/reductase SDR M001_016485 IPR016032 Signal transduction response regulator, C-terminal effector M001_016485 IPR036388 Winged helix-like DNA-binding domain superfamily M001_016485 IPR039420 Transcriptional regulatory protein WalR-like M001_016485 IPR001867 OmpR/PhoB-type DNA-binding domain M001_016485 IPR011006 CheY-like superfamily M001_016485 IPR001789 Signal transduction response regulator, receiver domain M001_016490 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_016490 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_016490 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_016490 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_016490 IPR005467 Histidine kinase domain M001_016490 IPR003594 Histidine kinase/HSP90-like ATPase M001_016490 IPR003660 HAMP domain M001_016490 IPR013727 Two-component sensor kinase, N-terminal M001_016500 IPR001093 IMP dehydrogenase/GMP reductase M001_016500 IPR015875 IMP dehydrogenase / GMP reductase, conserved site M001_016500 IPR005993 GMP reductase M001_016500 IPR013785 Aldolase-type TIM barrel M001_016510 IPR015365 Elongation factor P, C-terminal M001_016510 IPR012340 Nucleic acid-binding, OB-fold M001_016510 IPR014722 Ribosomal protein L2, domain 2 M001_016510 IPR020599 Translation elongation factor P/YeiP M001_016510 IPR013185 Translation elongation factor, KOW-like M001_016510 IPR011768 Translation elongation factor P M001_016510 IPR008991 Translation protein SH3-like domain superfamily M001_016510 IPR001059 Translation elongation factor P/YeiP, central M001_016520 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M001_016520 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M001_016520 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M001_016520 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_016520 IPR036291 NAD(P)-binding domain superfamily M001_016535 IPR036412 HAD-like superfamily M001_016535 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_016535 IPR006439 HAD hydrolase, subfamily IA M001_016535 IPR023214 HAD superfamily M001_016535 IPR041492 Haloacid dehalogenase-like hydrolase M001_016545 IPR036388 Winged helix-like DNA-binding domain superfamily M001_016545 IPR036390 Winged helix DNA-binding domain superfamily M001_016545 IPR005119 LysR, substrate-binding M001_016545 IPR000847 Transcription regulator HTH, LysR M001_016550 IPR029787 Nucleotide cyclase M001_016550 IPR007894 MASE2 M001_016550 IPR000160 GGDEF domain M001_016555 IPR002059 Cold-shock protein, DNA-binding M001_016555 IPR019844 Cold-shock (CSD) domain M001_016555 IPR012156 Cold shock, CspA M001_016555 IPR011129 Cold shock domain M001_016555 IPR012340 Nucleic acid-binding, OB-fold M001_016560 IPR000868 Isochorismatase-like M001_016560 IPR019916 Isochorismatase, RutB M001_016560 IPR036380 Isochorismatase-like superfamily M001_016565 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site M001_016565 IPR036188 FAD/NAD(P)-binding domain superfamily M001_016565 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 M001_016565 IPR002938 FAD-binding domain M001_016570 IPR023404 Radical SAM, alpha/beta horseshoe M001_016570 IPR013848 Methylthiotransferase, N-terminal M001_016570 IPR002792 TRAM domain M001_016570 IPR007197 Radical SAM M001_016570 IPR006638 Elp3/MiaB/NifB M001_016570 IPR005839 Methylthiotransferase M001_016570 IPR020612 Methylthiotransferase, conserved site M001_016570 IPR038135 Methylthiotransferase, N-terminal domain superfamily M001_016570 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB M001_016575 IPR003714 PhoH-like protein M001_016575 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_016580 IPR023091 Metalloprotease catalytic domain superfamily, predicted M001_016580 IPR002036 Endoribonuclease YbeY M001_016580 IPR020549 Endoribonuclease YbeY, conserved site M001_016585 IPR005170 Transporter-associated domain M001_016585 IPR000644 CBS domain M001_016585 IPR036318 FAD-binding, type PCMH-like superfamily M001_016585 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_016590 IPR003010 Carbon-nitrogen hydrolase M001_016590 IPR036526 Carbon-nitrogen hydrolase superfamily M001_016590 IPR004563 Apolipoprotein N-acyltransferase M001_016595 IPR003667 NqrDE/RnfAE M001_016595 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E M001_016605 IPR009061 Putative DNA-binding domain superfamily M001_016605 IPR000551 MerR-type HTH domain M001_016605 IPR037392 YfmP, Helix-Turn-Helix DNA binding domain M001_016610 IPR001667 DDH domain M001_016610 IPR038763 DHH phosphoesterase superfamily M001_016610 IPR003156 DHHA1 domain M001_016610 IPR041122 RecJ, OB domain M001_016610 IPR004610 Bacterial RecJ exonuclease M001_016620 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L M001_016620 IPR036019 Gated mechanosensitive channel M001_016620 IPR019823 Large-conductance mechanosensitive channel, conserved site M001_016620 IPR001185 Large-conductance mechanosensitive channel M001_016625 IPR000160 GGDEF domain M001_016625 IPR029787 Nucleotide cyclase M001_016625 IPR001789 Signal transduction response regulator, receiver domain M001_016625 IPR011006 CheY-like superfamily M001_016630 IPR011010 DNA breaking-rejoining enzyme, catalytic core M001_016630 IPR010998 Integrase/recombinase, N-terminal M001_016630 IPR002104 Integrase, catalytic domain M001_016630 IPR004107 Integrase, SAM-like, N-terminal M001_016630 IPR011932 Tyrosine recombinase XerD M001_016630 IPR023009 Tyrosine recombinase XerC/XerD M001_016630 IPR013762 Integrase-like, catalytic domain superfamily M001_016635 IPR008254 Flavodoxin/nitric oxide synthase M001_016635 IPR001226 Flavodoxin, conserved site M001_016635 IPR010086 Flavodoxin, long chain M001_016635 IPR029039 Flavoprotein-like superfamily M001_016640 IPR002510 Metalloprotease TldD/PmbA M001_016640 IPR036059 Metalloprotease TldD/PmbA superfamily M001_016640 IPR035068 Metalloprotease TldD/PmbA, N-terminal M001_016645 IPR025502 TldD M001_016645 IPR002510 Metalloprotease TldD/PmbA M001_016645 IPR035068 Metalloprotease TldD/PmbA, N-terminal M001_016645 IPR036059 Metalloprotease TldD/PmbA superfamily M001_016650 IPR009912 Zinc-ribbon containing domain M001_016655 IPR002302 Leucine-tRNA ligase M001_016655 IPR002300 Aminoacyl-tRNA synthetase, class Ia M001_016655 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M001_016655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_016655 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M001_016655 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M001_016655 IPR025709 Leucyl-tRNA synthetase, editing domain M001_016655 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M001_016670 IPR004821 Cytidyltransferase-like domain M001_016670 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase M001_016670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_016675 IPR004394 Protein Iojap/ribosomal silencing factor RsfS M001_016680 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M001_016680 IPR003742 RNA methyltransferase RlmH M001_016680 IPR029028 Alpha/beta knot methyltransferases M001_016685 IPR036138 Penicillin-binding protein, dimerisation domain superfamily M001_016685 IPR017790 Penicillin-binding protein 2 M001_016685 IPR012338 Beta-lactamase/transpeptidase-like M001_016685 IPR005311 Penicillin-binding protein, dimerisation domain M001_016685 IPR001460 Penicillin-binding protein, transpeptidase M001_016690 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site M001_016690 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA M001_016690 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB M001_016695 IPR031304 Transglycosylase SLT domain 2 M001_016695 IPR011757 Lytic transglycosylase MltB M001_016695 IPR023346 Lysozyme-like domain superfamily M001_016700 IPR007730 Sporulation-like domain M001_016700 IPR036680 Sporulation-like domain superfamily M001_016700 IPR012997 Rare lipoprotein A M001_016700 IPR034718 Endolytic peptidoglycan transglycosylase RlpA M001_016700 IPR009009 RlpA-like protein, double-psi beta-barrel domain M001_016700 IPR036908 RlpA-like domain superfamily M001_016705 IPR015956 Penicillin-binding protein, C-terminal domain superfamily M001_016705 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal M001_016705 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal M001_016705 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily M001_016705 IPR012338 Beta-lactamase/transpeptidase-like M001_016705 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A M001_016710 IPR007454 Uncharacterised protein family UPF0250 M001_016710 IPR027471 YbeD-like domain superfamily M001_016715 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M001_016715 IPR000544 Octanoyltransferase M001_016715 IPR020605 Octanoyltransferase, conserved site M001_016720 IPR007197 Radical SAM M001_016720 IPR013785 Aldolase-type TIM barrel M001_016720 IPR003698 Lipoyl synthase M001_016720 IPR031691 Lipoyl synthase, N-terminal M001_016720 IPR006638 Elp3/MiaB/NifB M001_016735 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family M001_016735 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site M001_016735 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain M001_016735 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain M001_016735 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I M001_016735 IPR036291 NAD(P)-binding domain superfamily M001_016740 IPR009749 Protein of unknown function DUF1315 M001_016745 IPR037152 L-asparaginase, N-terminal domain superfamily M001_016745 IPR020827 Asparaginase/glutaminase, active site 1 M001_016745 IPR006033 Type I L-asparaginase family M001_016745 IPR027475 Asparaginase/glutaminase, active site 2 M001_016745 IPR036152 Asparaginase/glutaminase-like superfamily M001_016745 IPR006034 Asparaginase/glutaminase-like M001_016745 IPR027474 L-asparaginase, N-terminal M001_016745 IPR041725 Type I (cytosolic) L-asparaginase M001_016745 IPR027473 L-asparaginase, C-terminal M001_016745 IPR040919 Asparaginase/glutaminase, C-terminal M001_016750 IPR004445 Sodium/glutamate symport carrier protein GltS M001_016755 IPR000727 Target SNARE coiled-coil homology domain M001_016755 IPR029151 Periplasmic sensor-like domain superfamily M001_016755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_016755 IPR033479 Double Cache domain 1 M001_016755 IPR003660 HAMP domain M001_016765 IPR006195 Aminoacyl-tRNA synthetase, class II M001_016765 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal M001_016765 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II M001_016765 IPR002313 Lysine-tRNA ligase, class II M001_016765 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M001_016765 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M001_016765 IPR012340 Nucleic acid-binding, OB-fold M001_016770 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily M001_016770 IPR001094 Flavodoxin-like M001_016770 IPR017927 FAD-binding domain, ferredoxin reductase-type M001_016770 IPR008254 Flavodoxin/nitric oxide synthase M001_016770 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase M001_016770 IPR029039 Flavoprotein-like superfamily M001_016770 IPR001433 Oxidoreductase FAD/NAD(P)-binding M001_016770 IPR017938 Riboflavin synthase-like beta-barrel M001_016770 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain M001_016770 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria M001_016770 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding M001_016770 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M001_016775 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain M001_016775 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit M001_016775 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain M001_016775 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site M001_016775 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily M001_016780 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase M001_016780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_016780 IPR002500 Phosphoadenosine phosphosulphate reductase M001_016780 IPR011800 Phosphoadenosine phosphosulphate reductase CysH M001_016785 IPR017925 Dihydrofolate reductase conserved site M001_016785 IPR024072 Dihydrofolate reductase-like domain superfamily M001_016785 IPR012259 Dihydrofolate reductase M001_016785 IPR001796 Dihydrofolate reductase domain M001_016790 IPR020914 Uncharacterised protein family UPF0442 M001_016790 IPR024528 Threonine/Serine exporter, ThrE M001_016795 IPR010619 Putative threonine/serine exporter M001_016805 IPR008284 Molybdenum cofactor biosynthesis, conserved site M001_016805 IPR001453 MoaB/Mog domain M001_016805 IPR036425 MoaB/Mog-like domain superfamily M001_016815 IPR010920 LSM domain superfamily M001_016815 IPR010305 Protein of unknown function DUF903 M001_016820 IPR001307 Thiosulphate sulfurtransferase, conserved site M001_016820 IPR036873 Rhodanese-like domain superfamily M001_016820 IPR001763 Rhodanese-like domain M001_016825 IPR012338 Beta-lactamase/transpeptidase-like M001_016825 IPR015868 Glutaminase M001_016830 IPR007416 Protein of unknown function DUF469 M001_016835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_016835 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type M001_016840 IPR004839 Aminotransferase, class I/classII M001_016840 IPR015424 Pyridoxal phosphate-dependent transferase M001_016840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_016840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_016845 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M001_016845 IPR035919 EAL domain superfamily M001_016845 IPR001633 EAL domain M001_016850 IPR010099 Epimerase family protein SDR39U1 M001_016850 IPR036291 NAD(P)-binding domain superfamily M001_016850 IPR001509 NAD-dependent epimerase/dehydratase M001_016850 IPR013549 Domain of unknown function DUF1731 M001_016855 IPR038766 Membrane component of ABC transporter, predicted M001_016860 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_016860 IPR017871 ABC transporter, conserved site M001_016860 IPR003439 ABC transporter-like M001_016860 IPR003593 AAA+ ATPase domain M001_016865 IPR008265 Lipase, GDSL, active site M001_016865 IPR013830 SGNH hydrolase-type esterase domain M001_016865 IPR036514 SGNH hydrolase superfamily M001_016870 IPR001789 Signal transduction response regulator, receiver domain M001_016870 IPR011006 CheY-like superfamily M001_016870 IPR002545 CheW-like domain M001_016870 IPR036061 CheW-like domain superfamily M001_016870 IPR024181 Chemotaxis response regulator CheV M001_016875 IPR017853 Glycoside hydrolase superfamily M001_016875 IPR029070 Chitinase insertion domain superfamily M001_016875 IPR009470 Chitinase, C-terminal M001_016875 IPR036573 Carbohydrate-binding module superfamily 5/12 M001_016875 IPR003610 Carbohydrate-binding module family 5/12 M001_016875 IPR001223 Glycoside hydrolase family 18, catalytic domain M001_016875 IPR013783 Immunoglobulin-like fold M001_016875 IPR011583 Chitinase II M001_016910 IPR014756 Immunoglobulin E-set M001_016910 IPR004302 Cellulose/chitin-binding protein, N-terminal M001_016910 IPR041029 N-acetylglucosamine binding protein A domain 2 M001_016910 IPR020879 N-acetylglucosamine-binding protein A M001_016915 IPR022218 ToxR activated gene A lipoprotein domain M001_016915 IPR040966 Metalloprotease StcE, C-terminal M001_016915 IPR019503 Peptidase M66 domain M001_016920 IPR011583 Chitinase II M001_016920 IPR029070 Chitinase insertion domain superfamily M001_016920 IPR013540 Chitinase A N-terminal M001_016920 IPR001223 Glycoside hydrolase family 18, catalytic domain M001_016920 IPR001579 Glycoside hydrolase, chitinase active site M001_016920 IPR013783 Immunoglobulin-like fold M001_016920 IPR017853 Glycoside hydrolase superfamily M001_016920 IPR022409 PKD/Chitinase domain M001_016920 IPR014756 Immunoglobulin E-set M001_016925 IPR000014 PAS domain M001_016925 IPR029787 Nucleotide cyclase M001_016925 IPR000700 PAS-associated, C-terminal M001_016925 IPR000160 GGDEF domain M001_016925 IPR035965 PAS domain superfamily M001_016925 IPR013656 PAS fold-4 M001_016930 IPR011583 Chitinase II M001_016930 IPR029070 Chitinase insertion domain superfamily M001_016930 IPR001223 Glycoside hydrolase family 18, catalytic domain M001_016930 IPR022409 PKD/Chitinase domain M001_016930 IPR014756 Immunoglobulin E-set M001_016930 IPR013783 Immunoglobulin-like fold M001_016930 IPR017853 Glycoside hydrolase superfamily M001_016930 IPR013540 Chitinase A N-terminal M001_016930 IPR001579 Glycoside hydrolase, chitinase active site M001_016935 IPR001789 Signal transduction response regulator, receiver domain M001_016935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_016935 IPR003660 HAMP domain M001_016935 IPR019247 Histidine kinase BarA, N-terminal M001_016935 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_016935 IPR036641 HPT domain superfamily M001_016935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_016935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_016935 IPR005467 Histidine kinase domain M001_016935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_016935 IPR003594 Histidine kinase/HSP90-like ATPase M001_016935 IPR011006 CheY-like superfamily M001_016945 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_016945 IPR001387 Cro/C1-type helix-turn-helix domain M001_016955 IPR026032 Probable 3-phenylpropionic acid transporter M001_016955 IPR024989 Major facilitator superfamily associated domain M001_016955 IPR036259 MFS transporter superfamily M001_016990 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset M001_016990 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein M001_016990 IPR037026 Vgr protein, OB-fold domain superfamily M001_016990 IPR006531 Gp5 N-terminal M001_016995 IPR036624 Hcp1-like superfamily M001_016995 IPR008514 Type VI secretion system effector, Hcp M001_017005 IPR037066 TonB-dependent receptor, plug domain superfamily M001_017005 IPR012910 TonB-dependent receptor, plug domain M001_017005 IPR010101 TonB-dependent vitamin B12 transporter BtuB M001_017005 IPR000531 TonB-dependent receptor-like, beta-barrel M001_017005 IPR010916 TonB box, conserved site M001_017005 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M001_017005 IPR010917 TonB-dependent receptor, conserved site M001_017005 IPR039426 Vitamin B12 transporter BtuB-like M001_017025 IPR014419 Heme utilization protein HutZ M001_017025 IPR012349 FMN-binding split barrel M001_017025 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative M001_017030 IPR010413 Intracellular heme transport protein HutX-like M001_017040 IPR037294 ABC transporter, BtuC-like M001_017040 IPR000522 ABC transporter, permease protein, BtuC-like M001_017045 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017045 IPR003593 AAA+ ATPase domain M001_017045 IPR003439 ABC transporter-like M001_017045 IPR015863 ABC transporter, hemin import, HmuV M001_017055 IPR023172 Peptidase S51, dipeptidase E M001_017055 IPR029062 Class I glutamine amidotransferase-like M001_017055 IPR005320 Peptidase S51 M001_017060 IPR001602 Uncharacterised protein family UPF0047 M001_017060 IPR035917 YjbQ-like superfamily M001_017065 IPR029066 PLP-binding barrel M001_017065 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M001_017065 IPR011079 Alanine racemase, C-terminal M001_017065 IPR001608 Alanine racemase, N-terminal M001_017065 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site M001_017065 IPR000821 Alanine racemase M001_017070 IPR007692 DNA helicase, DnaB type M001_017070 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017070 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M001_017070 IPR007694 DNA helicase, DnaB-like, C-terminal M001_017070 IPR007693 DNA helicase, DnaB-like, N-terminal M001_017070 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily M001_017070 IPR003593 AAA+ ATPase domain M001_017080 IPR029052 Metallo-dependent phosphatase-like M001_017080 IPR008334 5'-Nucleotidase, C-terminal M001_017080 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M001_017080 IPR006146 5'-Nucleotidase, conserved site M001_017080 IPR006179 5'-Nucleotidase/apyrase M001_017080 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M001_017100 IPR003593 AAA+ ATPase domain M001_017100 IPR011006 CheY-like superfamily M001_017100 IPR009057 Homeobox-like domain superfamily M001_017100 IPR002197 DNA binding HTH domain, Fis-type M001_017100 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017100 IPR001789 Signal transduction response regulator, receiver domain M001_017100 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_017100 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_017100 IPR025944 Sigma-54 interaction domain, conserved site M001_017105 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal M001_017105 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M001_017105 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily M001_017115 IPR007236 SlyX M001_017120 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M001_017125 IPR012658 Conserved hypothetical protein CHP02443 M001_017135 IPR001789 Signal transduction response regulator, receiver domain M001_017135 IPR011006 CheY-like superfamily M001_017135 IPR002545 CheW-like domain M001_017135 IPR036061 CheW-like domain superfamily M001_017135 IPR024181 Chemotaxis response regulator CheV M001_017140 IPR000952 AB hydrolase 4, conserved site M001_017140 IPR000073 Alpha/beta hydrolase fold-1 M001_017140 IPR029058 Alpha/Beta hydrolase fold M001_017140 IPR012020 AB hydrolase 4 family M001_017145 IPR013515 Phytochrome, central region M001_017145 IPR035919 EAL domain superfamily M001_017145 IPR001294 Phytochrome M001_017145 IPR016132 Phytochrome chromophore attachment domain M001_017145 IPR029787 Nucleotide cyclase M001_017145 IPR001633 EAL domain M001_017145 IPR029016 GAF-like domain superfamily M001_017145 IPR003018 GAF domain M001_017145 IPR000160 GGDEF domain M001_017150 IPR036685 YehU-like superfamily M001_017150 IPR010648 Uncharacterised protein family UPF0270 M001_017155 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017155 IPR006082 Phosphoribulokinase M001_017155 IPR006083 Phosphoribulokinase/uridine kinase M001_017170 IPR036102 OsmC/Ohr superfamily M001_017170 IPR003718 OsmC/Ohr family M001_017170 IPR015946 K homology domain-like, alpha/beta M001_017175 IPR018488 Cyclic nucleotide-binding, conserved site M001_017175 IPR014710 RmlC-like jelly roll fold M001_017175 IPR000595 Cyclic nucleotide-binding domain M001_017175 IPR012318 Crp-type HTH domain M001_017175 IPR018490 Cyclic nucleotide-binding-like M001_017175 IPR036388 Winged helix-like DNA-binding domain superfamily M001_017175 IPR036390 Winged helix DNA-binding domain superfamily M001_017175 IPR018335 Transcription regulator HTH, Crp-type, conserved site M001_017180 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC M001_017180 IPR013216 Methyltransferase type 11 M001_017180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_017185 IPR001897 Porin, gammaproteobacterial M001_017185 IPR023614 Porin domain superfamily M001_017185 IPR001702 Porin, Gram-negative type M001_017185 IPR013793 Porin, Gram-negative type, conserved site M001_017195 IPR006016 UspA M001_017195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_017195 IPR006015 Universal stress protein A family M001_017210 IPR029056 Ribokinase-like M001_017210 IPR011611 Carbohydrate kinase PfkB M001_017210 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M001_017215 IPR022830 Indigoidine synthase A-like M001_017215 IPR007342 Pseudouridine-5'-phosphate glycosidase M001_017220 IPR023561 Carbonic anhydrase, alpha-class M001_017220 IPR036398 Alpha carbonic anhydrase domain superfamily M001_017220 IPR018338 Carbonic anhydrase, alpha-class, conserved site M001_017220 IPR001148 Alpha carbonic anhydrase domain M001_017220 IPR041891 Carbonic anhydrase, prokaryotic-like M001_017225 IPR002410 Peptidase S33 M001_017225 IPR000073 Alpha/beta hydrolase fold-1 M001_017225 IPR029058 Alpha/Beta hydrolase fold M001_017240 IPR009671 Regulator of ribonuclease activity B domain M001_017240 IPR036701 RraB-like superfamily M001_017240 IPR016716 Regulator of ribonuclease activity B M001_017245 IPR029787 Nucleotide cyclase M001_017245 IPR005330 MHYT domain M001_017245 IPR000160 GGDEF domain M001_017245 IPR035919 EAL domain superfamily M001_017245 IPR001633 EAL domain M001_017260 IPR006037 Regulator of K+ conductance, C-terminal M001_017260 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M001_017260 IPR023018 Transport protein YidE, putative M001_017260 IPR006512 YidE/YbjL duplication M001_017265 IPR005744 Hly-III M001_017265 IPR004254 AdipoR/Haemolysin-III-related M001_017270 IPR015424 Pyridoxal phosphate-dependent transferase M001_017270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_017270 IPR002129 Pyridoxal phosphate-dependent decarboxylase M001_017270 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent M001_017275 IPR006008 Intracellular septation protein A M001_017280 IPR005545 YCII-related M001_017280 IPR011008 Dimeric alpha-beta barrel M001_017285 IPR000760 Inositol monophosphatase-like M001_017285 IPR020550 Inositol monophosphatase, conserved site M001_017285 IPR020583 Inositol monophosphatase, metal-binding site M001_017285 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ M001_017290 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ M001_017290 IPR036130 Pyridoxine 5'-phosphate synthase M001_017290 IPR013785 Aldolase-type TIM barrel M001_017295 IPR012340 Nucleic acid-binding, OB-fold M001_017295 IPR003717 Recombination protein O, RecO M001_017295 IPR022572 DNA replication/recombination mediator RecO, N-terminal M001_017295 IPR037278 ARFGAP/RecO-like zinc finger M001_017300 IPR015946 K homology domain-like, alpha/beta M001_017300 IPR004044 K Homology domain, type 2 M001_017300 IPR009019 K homology domain superfamily, prokaryotic type M001_017300 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017300 IPR005225 Small GTP-binding protein domain M001_017300 IPR005662 GTP-binding protein Era M001_017300 IPR006073 GTP binding domain M001_017300 IPR030388 Era-type guanine nucleotide-binding (G) domain M001_017305 IPR014720 Double-stranded RNA-binding domain M001_017305 IPR011907 Ribonuclease III M001_017305 IPR036389 Ribonuclease III, endonuclease domain superfamily M001_017305 IPR000999 Ribonuclease III domain M001_017310 IPR036286 LexA/Signal peptidase-like superfamily M001_017310 IPR019533 Peptidase S26 M001_017310 IPR019756 Peptidase S26A, signal peptidase I, serine active site M001_017310 IPR019757 Peptidase S26A, signal peptidase I, lysine active site M001_017310 IPR019758 Peptidase S26A, signal peptidase I, conserved site M001_017310 IPR000223 Peptidase S26A, signal peptidase I M001_017315 IPR000795 Transcription factor, GTP-binding domain M001_017315 IPR000640 Elongation factor EFG, domain V-like M001_017315 IPR035647 EF-G domain III/V-like M001_017315 IPR006297 Elongation factor 4 M001_017315 IPR038363 LepA, C-terminal domain superfamily M001_017315 IPR035654 Elongation factor 4, domain IV M001_017315 IPR013842 GTP-binding protein LepA, C-terminal M001_017315 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017315 IPR004161 Translation elongation factor EFTu-like, domain 2 M001_017315 IPR031157 Tr-type G domain, conserved site M001_017315 IPR005225 Small GTP-binding protein domain M001_017325 IPR033436 MucB/RseB, C-terminal M001_017325 IPR038484 MucB/RseB, C-terminal domain superfamily M001_017325 IPR033434 MucB/RseB, N-terminal M001_017325 IPR005588 MucB/RseB M001_017330 IPR005572 Anti sigma-E protein RseA, N-terminal M001_017330 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily M001_017330 IPR026279 Sigma-E factor negative regulatory protein RseA M001_017330 IPR005573 Anti sigma-E protein RseA, C-terminal M001_017335 IPR039425 RNA polymerase sigma-70 like M001_017335 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site M001_017335 IPR007627 RNA polymerase sigma-70 region 2 M001_017335 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 M001_017335 IPR014286 RNA polymerase sigma-70 RpoE type M001_017335 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_017335 IPR014284 RNA polymerase sigma-70 like domain M001_017335 IPR013325 RNA polymerase sigma factor, region 2 M001_017335 IPR036388 Winged helix-like DNA-binding domain superfamily M001_017340 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain M001_017340 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily M001_017340 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal M001_017340 IPR005288 L-aspartate oxidase M001_017340 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily M001_017340 IPR036188 FAD/NAD(P)-binding domain superfamily M001_017350 IPR005631 Flavinator of succinate dehydrogenase M001_017350 IPR036714 Flavinator of succinate dehydrogenase superfamily M001_017355 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal M001_017355 IPR023758 tRNA-modifying protein YgfZ M001_017355 IPR017703 YgfZ/GcvT conserved site M001_017355 IPR006222 Aminomethyltransferase, folate-binding domain M001_017360 IPR005119 LysR, substrate-binding M001_017360 IPR037424 Regulatory protein NocR, PBP2 domain M001_017360 IPR000847 Transcription regulator HTH, LysR M001_017360 IPR036390 Winged helix DNA-binding domain superfamily M001_017360 IPR036388 Winged helix-like DNA-binding domain superfamily M001_017375 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M001_017375 IPR004323 Divalent ion tolerance protein, CutA M001_017375 IPR011322 Nitrogen regulatory PII-like, alpha/beta M001_017375 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria M001_017380 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily M001_017380 IPR017937 Thioredoxin, conserved site M001_017380 IPR036249 Thioredoxin-like superfamily M001_017380 IPR003834 Cytochrome C biogenesis protein, transmembrane domain M001_017380 IPR035671 DsbD gamma M001_017380 IPR022910 Thiol:disulphide interchange protein DsbD M001_017380 IPR013766 Thioredoxin domain M001_017380 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain M001_017400 IPR036188 FAD/NAD(P)-binding domain superfamily M001_017400 IPR006076 FAD dependent oxidoreductase M001_017405 IPR013785 Aldolase-type TIM barrel M001_017405 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype M001_017405 IPR000771 Fructose-bisphosphate aldolase, class-II M001_017410 IPR015824 Phosphoglycerate kinase, N-terminal M001_017410 IPR001576 Phosphoglycerate kinase M001_017410 IPR015911 Phosphoglycerate kinase, conserved site M001_017410 IPR036043 Phosphoglycerate kinase superfamily M001_017415 IPR006422 D-erythrose-4-phosphate dehydrogenase M001_017415 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain M001_017415 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain M001_017415 IPR036291 NAD(P)-binding domain superfamily M001_017415 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family M001_017420 IPR000600 ROK family M001_017425 IPR006361 Uroporphyrinogen decarboxylase HemE M001_017425 IPR000257 Uroporphyrinogen decarboxylase (URO-D) M001_017425 IPR038071 UROD/MetE-like superfamily M001_017430 IPR015797 NUDIX hydrolase-like domain superfamily M001_017430 IPR000086 NUDIX hydrolase domain M001_017430 IPR015376 Zinc ribbon, NADH pyrophosphatase M001_017430 IPR022925 NADH pyrophosphatase NudC M001_017435 IPR025703 Bifunctional protein PutA M001_017435 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 M001_017435 IPR015590 Aldehyde dehydrogenase domain M001_017435 IPR016162 Aldehyde dehydrogenase, N-terminal M001_017435 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M001_017435 IPR013321 Arc-type ribbon-helix-helix M001_017435 IPR024082 Proline dehydrogenase PutA, domain II M001_017435 IPR016163 Aldehyde dehydrogenase, C-terminal M001_017435 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain M001_017435 IPR024090 Proline dehydrogenase PutA, domain I M001_017435 IPR016160 Aldehyde dehydrogenase, cysteine active site M001_017435 IPR024089 Proline dehydrogenase PutA, domain I/II M001_017435 IPR016161 Aldehyde/histidinol dehydrogenase M001_017435 IPR002872 Proline dehydrogenase domain M001_017435 IPR010985 Ribbon-helix-helix M001_017435 IPR029041 FAD-linked oxidoreductase-like M001_017440 IPR003646 SH3-like domain, bacterial-type M001_017440 IPR016476 SH3 domain protein M001_017445 IPR018490 Cyclic nucleotide-binding-like M001_017445 IPR028325 Voltage-gated potassium channel M001_017445 IPR014710 RmlC-like jelly roll fold M001_017445 IPR018488 Cyclic nucleotide-binding, conserved site M001_017445 IPR005821 Ion transport domain M001_017445 IPR000595 Cyclic nucleotide-binding domain M001_017450 IPR003660 HAMP domain M001_017450 IPR004090 Chemotaxis methyl-accepting receptor M001_017450 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_017455 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme M001_017455 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase M001_017455 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain M001_017480 IPR001789 Signal transduction response regulator, receiver domain M001_017480 IPR016032 Signal transduction response regulator, C-terminal effector M001_017480 IPR001867 OmpR/PhoB-type DNA-binding domain M001_017480 IPR011006 CheY-like superfamily M001_017480 IPR039420 Transcriptional regulatory protein WalR-like M001_017480 IPR036388 Winged helix-like DNA-binding domain superfamily M001_017495 IPR022925 NADH pyrophosphatase NudC M001_017495 IPR015797 NUDIX hydrolase-like domain superfamily M001_017495 IPR000086 NUDIX hydrolase domain M001_017495 IPR015376 Zinc ribbon, NADH pyrophosphatase M001_017495 IPR015375 NADH pyrophosphatase-like, N-terminal M001_017520 IPR004136 Nitronate monooxygenase M001_017520 IPR013785 Aldolase-type TIM barrel M001_017525 IPR033130 Ribonuclease T2, His active site 2 M001_017525 IPR036430 Ribonuclease T2-like superfamily M001_017525 IPR001568 Ribonuclease T2-like M001_017525 IPR018188 Ribonuclease T2, His active site 1 M001_017535 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal M001_017535 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal M001_017535 IPR002747 SAM-dependent chlorinase/fluorinase M001_017545 IPR000160 GGDEF domain M001_017545 IPR029787 Nucleotide cyclase M001_017545 IPR029016 GAF-like domain superfamily M001_017550 IPR028622 ATP-dependent RNA helicase RhlE M001_017550 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_017550 IPR011545 DEAD/DEAH box helicase domain M001_017550 IPR001650 Helicase, C-terminal M001_017550 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017550 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_017550 IPR014014 RNA helicase, DEAD-box type, Q motif M001_017560 IPR001018 Beta-lactamase, class-B, conserved site M001_017560 IPR001279 Metallo-beta-lactamase M001_017560 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M001_017580 IPR000120 Amidase M001_017580 IPR020556 Amidase, conserved site M001_017580 IPR036928 Amidase signature (AS) superfamily M001_017580 IPR023631 Amidase signature domain M001_017580 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit M001_017585 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type M001_017585 IPR017754 Agmatine deiminase M001_017590 IPR036388 Winged helix-like DNA-binding domain superfamily M001_017590 IPR005119 LysR, substrate-binding M001_017590 IPR000847 Transcription regulator HTH, LysR M001_017590 IPR036390 Winged helix DNA-binding domain superfamily M001_017595 IPR007569 Protein of unknown function DUF559 M001_017595 IPR011335 Restriction endonuclease type II-like M001_017605 IPR013785 Aldolase-type TIM barrel M001_017605 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M001_017610 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_017610 IPR013325 RNA polymerase sigma factor, region 2 M001_017610 IPR007624 RNA polymerase sigma-70 region 3 M001_017610 IPR014284 RNA polymerase sigma-70 like domain M001_017610 IPR012761 RNA polymerase sigma factor RpoS M001_017610 IPR000943 RNA polymerase sigma-70 M001_017610 IPR009042 RNA polymerase sigma-70 region 1.2 M001_017610 IPR007627 RNA polymerase sigma-70 region 2 M001_017610 IPR036388 Winged helix-like DNA-binding domain superfamily M001_017610 IPR007630 RNA polymerase sigma-70 region 4 M001_017615 IPR036779 LysM domain superfamily M001_017615 IPR016047 Peptidase M23 M001_017615 IPR018392 LysM domain M001_017615 IPR011055 Duplicated hybrid motif M001_017620 IPR032816 SNARE associated Golgi protein M001_017625 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase M001_017625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_017630 IPR036523 SurE-like phosphatase/nucleotidase superfamily M001_017630 IPR030048 Survival protein SurE M001_017630 IPR002828 Survival protein SurE-like phosphatase/nucleotidase M001_017635 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_017635 IPR001656 Pseudouridine synthase, TruD M001_017635 IPR020119 Pseudouridine synthase TruD, conserved site M001_017635 IPR042214 Pseudouridine synthase, TruD, catalytic domain M001_017635 IPR011760 Pseudouridine synthase, TruD, insertion domain M001_017640 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily M001_017640 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site M001_017640 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase M001_017645 IPR034683 Cytidylyltransferase IspD/TarI M001_017645 IPR029044 Nucleotide-diphospho-sugar transferases M001_017645 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site M001_017645 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M001_017650 IPR007060 Septum formation initiator FtsL/DivIC M001_017650 IPR023081 Cell division protein FtsB M001_017655 IPR038377 Sodium/glucose symporter superfamily M001_017655 IPR018212 Sodium/solute symporter, conserved site M001_017655 IPR001734 Sodium/solute symporter M001_017655 IPR011851 Sodium/proline symporter M001_017665 IPR005490 L,D-transpeptidase catalytic domain M001_017665 IPR041597 L,D-transpeptidase C-terminal domain M001_017665 IPR038063 L,D-transpeptidase catalytic domain-like M001_017670 IPR030192 Miniconductance mechanosensitive channel YbdG M001_017670 IPR011066 Mechanosensitive ion channel MscS, C-terminal M001_017670 IPR006685 Mechanosensitive ion channel MscS M001_017670 IPR010920 LSM domain superfamily M001_017675 IPR023865 Aliphatic acid kinase, short-chain, conserved site M001_017675 IPR004372 Acetate/propionate kinase M001_017675 IPR000890 Aliphatic acid kinase, short-chain M001_017680 IPR004375 YhcH/YjgK/YiaL family M001_017680 IPR037012 YhcH/YjgK/YiaL superfamily M001_017690 IPR004380 Aspartate racemase M001_017690 IPR015942 Asp/Glu/hydantoin racemase M001_017690 IPR001920 Asp/Glu racemase M001_017690 IPR033134 Asp/Glu racemase, active site 2 M001_017690 IPR018187 Asp/Glu racemase, active site 1 M001_017695 IPR001123 Amino acid exporter protein, LeuE-type M001_017705 IPR000524 Transcription regulator HTH, GntR M001_017705 IPR004839 Aminotransferase, class I/classII M001_017705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_017705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_017705 IPR036388 Winged helix-like DNA-binding domain superfamily M001_017705 IPR036390 Winged helix DNA-binding domain superfamily M001_017705 IPR015424 Pyridoxal phosphate-dependent transferase M001_017720 IPR003156 DHHA1 domain M001_017720 IPR000644 CBS domain M001_017720 IPR002646 Poly A polymerase, head domain M001_017720 IPR001667 DDH domain M001_017720 IPR038763 DHH phosphoesterase superfamily M001_017725 IPR017871 ABC transporter, conserved site M001_017725 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017725 IPR003593 AAA+ ATPase domain M001_017725 IPR032781 ABC-transporter extension domain M001_017725 IPR003439 ABC transporter-like M001_017735 IPR007473 Ribosomal RNA large subunit methyltransferase J M001_017735 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_017735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_017795 IPR036849 Enolase-like, C-terminal domain superfamily M001_017795 IPR020811 Enolase, N-terminal M001_017795 IPR020809 Enolase, conserved site M001_017795 IPR000941 Enolase M001_017795 IPR020810 Enolase, C-terminal TIM barrel domain M001_017795 IPR029017 Enolase-like, N-terminal M001_017800 IPR017456 CTP synthase, N-terminal M001_017800 IPR029062 Class I glutamine amidotransferase-like M001_017800 IPR033828 CTP synthase GATase domain M001_017800 IPR017926 Glutamine amidotransferase M001_017800 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017800 IPR004468 CTP synthase M001_017805 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M001_017805 IPR011551 NTP pyrophosphohydrolase MazG M001_017810 IPR033655 RelA, TGS domain M001_017810 IPR003607 HD/PDEase domain M001_017810 IPR007685 RelA/SpoT M001_017810 IPR002912 ACT domain M001_017810 IPR012675 Beta-grasp domain superfamily M001_017810 IPR004095 TGS M001_017810 IPR004811 RelA/SpoT family M001_017810 IPR012676 TGS-like M001_017815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_017815 IPR012340 Nucleic acid-binding, OB-fold M001_017815 IPR030391 RNA methyltransferase TrmA, conserved site M001_017815 IPR030390 RNA methyltransferase TrmA, active site M001_017815 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD M001_017815 IPR010280 (Uracil-5)-methyltransferase family M001_017815 IPR002792 TRAM domain M001_017820 IPR011006 CheY-like superfamily M001_017820 IPR003660 HAMP domain M001_017820 IPR003594 Histidine kinase/HSP90-like ATPase M001_017820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_017820 IPR019247 Histidine kinase BarA, N-terminal M001_017820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_017820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_017820 IPR005467 Histidine kinase domain M001_017820 IPR001789 Signal transduction response regulator, receiver domain M001_017820 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_017820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_017820 IPR036641 HPT domain superfamily M001_017825 IPR009921 Domain of unknown function DUF1456 M001_017830 IPR036366 PGBD superfamily M001_017830 IPR002502 N-acetylmuramoyl-L-alanine amidase domain M001_017830 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily M001_017830 IPR036365 PGBD-like superfamily M001_017835 IPR009078 Ferritin-like superfamily M001_017835 IPR008331 Ferritin/DPS protein domain M001_017835 IPR012347 Ferritin-like M001_017835 IPR023188 DNA-binding protein Dps, conserved site M001_017835 IPR002177 DNA-binding protein Dps M001_017840 IPR016099 Prismane-like, alpha/beta-sandwich M001_017840 IPR011254 Prismane-like superfamily M001_017840 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase M001_017840 IPR010048 Hydroxylamine reductase M001_017840 IPR016100 Prismane, alpha-bundle M001_017845 IPR017927 FAD-binding domain, ferredoxin reductase-type M001_017845 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M001_017845 IPR023950 Flavohemoprotein M001_017845 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase M001_017845 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M001_017845 IPR000971 Globin M001_017845 IPR009050 Globin-like superfamily M001_017845 IPR012292 Globin/Protoglobin M001_017845 IPR017938 Riboflavin synthase-like beta-barrel M001_017845 IPR001433 Oxidoreductase FAD/NAD(P)-binding M001_017850 IPR036291 NAD(P)-binding domain superfamily M001_017850 IPR005886 UDP-glucose 4-epimerase M001_017850 IPR001509 NAD-dependent epimerase/dehydratase M001_017855 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M001_017855 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M001_017855 IPR032908 Lipid A 1-diphosphate synthase M001_017860 IPR004101 Mur ligase, C-terminal M001_017860 IPR036615 Mur ligase, C-terminal domain superfamily M001_017860 IPR036565 Mur-like, catalytic domain superfamily M001_017860 IPR000713 Mur ligase, N-terminal catalytic domain M001_017860 IPR005757 Murein peptide ligase M001_017860 IPR013221 Mur ligase, central M001_017865 IPR004507 Flavin prenyltransferase UbiX-like M001_017865 IPR003382 Flavoprotein M001_017865 IPR036551 Flavin prenyltransferase-like M001_017870 IPR009057 Homeobox-like domain superfamily M001_017870 IPR001647 DNA-binding HTH domain, TetR-type M001_017870 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M001_017875 IPR005904 Hypoxanthine phosphoribosyl transferase M001_017875 IPR000836 Phosphoribosyltransferase domain M001_017875 IPR029057 Phosphoribosyltransferase-like M001_017880 IPR017871 ABC transporter, conserved site M001_017880 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017880 IPR003593 AAA+ ATPase domain M001_017880 IPR003439 ABC transporter-like M001_017885 IPR000412 ABC-2 transporter M001_017885 IPR013525 ABC-2 type transporter M001_017920 IPR004821 Cytidyltransferase-like domain M001_017920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_017920 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain M001_017920 IPR003721 Pantoate-beta-alanine ligase M001_017925 IPR003700 Ketopantoate hydroxymethyltransferase M001_017925 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M001_017925 IPR040442 Pyruvate kinase-like domain superfamily M001_017930 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK M001_017930 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily M001_017935 IPR025866 Polymerase A arginine-rich C-terminal domain M001_017935 IPR002646 Poly A polymerase, head domain M001_017935 IPR010206 Poly(A) polymerase I M001_017935 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain M001_017940 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain M001_017940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_017940 IPR022380 Glutamyl-Q tRNA(Asp) synthetase M001_017940 IPR000924 Glutamyl/glutaminyl-tRNA synthetase M001_017945 IPR020458 Zinc finger, DksA/TraR C4-type conserved site M001_017945 IPR012784 RNA polymerase-binding transcription factor DksA M001_017945 IPR037187 DksA, N-terminal domain superfamily M001_017945 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M001_017945 IPR000962 Zinc finger, DksA/TraR C4-type M001_017950 IPR041465 SfsA, N-terminal OB domain M001_017950 IPR005224 Sugar fermentation stimulation protein M001_017950 IPR040452 Sugar fermentation stimulation protein, C-terminal M001_017960 IPR001650 Helicase, C-terminal M001_017960 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_017960 IPR010225 ATP-dependent helicase HrpB M001_017960 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_017960 IPR007502 Helicase-associated domain M001_017960 IPR011545 DEAD/DEAH box helicase domain M001_017960 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal M001_017965 IPR012338 Beta-lactamase/transpeptidase-like M001_017965 IPR011813 Penicillin-binding protein 1B M001_017965 IPR023346 Lysozyme-like domain superfamily M001_017965 IPR036950 Penicillin binding protein transglycosylase domain M001_017965 IPR001460 Penicillin-binding protein, transpeptidase M001_017965 IPR028166 Bifunctional transglycosylase second domain M001_017965 IPR001264 Glycosyl transferase, family 51 M001_017970 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M001_017970 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M001_017970 IPR037478 YwkD-like domain M001_017970 IPR037523 Vicinal oxygen chelate (VOC) domain M001_017975 IPR023737 Spermidine export protein MdtI M001_017975 IPR000390 Small multidrug resistance protein family M001_017980 IPR000390 Small multidrug resistance protein family M001_017980 IPR023740 Spermidine export protein MdtJ M001_017990 IPR001789 Signal transduction response regulator, receiver domain M001_017990 IPR011006 CheY-like superfamily M001_017990 IPR021800 Domain of unknown function DUF3369 M001_017990 IPR003607 HD/PDEase domain M001_017990 IPR037522 HD-GYP domain M001_017995 IPR036649 Inorganic pyrophosphatase superfamily M001_017995 IPR008162 Inorganic pyrophosphatase M001_018010 IPR006513 Conserved hypothetical protein CHP01626, YtfJ M001_018025 IPR003593 AAA+ ATPase domain M001_018025 IPR003439 ABC transporter-like M001_018025 IPR017871 ABC transporter, conserved site M001_018025 IPR015854 ABC transporter, lipoprotein release, LolD M001_018025 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_018025 IPR011924 Lipoprotein releasing system, ATP-binding protein M001_018045 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_018045 IPR001610 PAC motif M001_018045 IPR000014 PAS domain M001_018045 IPR035965 PAS domain superfamily M001_018045 IPR003660 HAMP domain M001_018045 IPR004090 Chemotaxis methyl-accepting receptor M001_018045 IPR013655 PAS fold-3 M001_018060 IPR002891 Adenylyl-sulfate kinase M001_018060 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_018065 IPR004680 Citrate transporter-like domain M001_018065 IPR031312 Sodium/sulphate symporter, conserved site M001_018065 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M001_018065 IPR006037 Regulator of K+ conductance, C-terminal M001_018070 IPR009000 Translation protein, beta-barrel domain superfamily M001_018070 IPR000795 Transcription factor, GTP-binding domain M001_018070 IPR031157 Tr-type G domain, conserved site M001_018070 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_018070 IPR005225 Small GTP-binding protein domain M001_018070 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain M001_018070 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M001_018070 IPR011779 Sulphate adenylyltransferase, large subunit M001_018075 IPR002500 Phosphoadenosine phosphosulphate reductase M001_018075 IPR011784 Sulphate adenylyltransferase, small subunit M001_018075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_018080 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site M001_018080 IPR037115 Sirohaem synthase, dimerisation domain superfamily M001_018080 IPR035996 Tetrapyrrole methylase superfamily M001_018080 IPR006367 Sirohaem synthase, N-terminal M001_018080 IPR000878 Tetrapyrrole methylase M001_018080 IPR014776 Tetrapyrrole methylase, subdomain 2 M001_018080 IPR014777 Tetrapyrrole methylase, subdomain 1 M001_018080 IPR028281 Siroheme synthase, central domain M001_018080 IPR019478 Sirohaem synthase, dimerisation domain M001_018080 IPR006366 Uroporphyrin-III C-methyltransferase M001_018080 IPR012409 Sirohaem synthase M001_018080 IPR036291 NAD(P)-binding domain superfamily M001_018085 IPR018080 Band 7/stomatin-like, conserved site M001_018085 IPR036013 Band 7/SPFH domain superfamily M001_018085 IPR001107 Band 7 domain M001_018085 IPR001972 Stomatin family M001_018085 IPR032435 Band 7, C-terminal extension M001_018090 IPR002810 NfeD-like, C-terminal domain M001_018095 IPR003660 HAMP domain M001_018095 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_018100 IPR036094 Quinolinate synthetase A superfamily M001_018100 IPR023513 Quinolinate synthase A, type 1 M001_018100 IPR003473 Quinolinate synthetase A M001_018105 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase M001_018105 IPR025532 Glucose-6-phosphate 1-epimerase M001_018105 IPR011013 Galactose mutarotase-like domain superfamily M001_018105 IPR014718 Glycoside hydrolase-type carbohydrate-binding M001_018110 IPR036291 NAD(P)-binding domain superfamily M001_018110 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family M001_018110 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site M001_018110 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain M001_018110 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I M001_018110 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain M001_018115 IPR003385 Glycoside hydrolase, family 77 M001_018115 IPR017853 Glycoside hydrolase superfamily M001_018120 IPR013783 Immunoglobulin-like fold M001_018120 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta M001_018120 IPR037439 1,4-alpha-glucan-branching enzyme M001_018120 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB M001_018120 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_018120 IPR004193 Glycoside hydrolase, family 13, N-terminal M001_018120 IPR013780 Glycosyl hydrolase, all-beta M001_018120 IPR017853 Glycoside hydrolase superfamily M001_018120 IPR014756 Immunoglobulin E-set M001_018125 IPR013780 Glycosyl hydrolase, all-beta M001_018125 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_018125 IPR014756 Immunoglobulin E-set M001_018125 IPR013783 Immunoglobulin-like fold M001_018125 IPR017853 Glycoside hydrolase superfamily M001_018125 IPR011837 Glycogen debranching enzyme, GlgX type M001_018125 IPR004193 Glycoside hydrolase, family 13, N-terminal M001_018130 IPR028427 Peptide methionine sulfoxide reductase M001_018130 IPR011057 Mss4-like superfamily M001_018130 IPR002579 Peptide methionine sulphoxide reductase MrsB M001_018140 IPR006357 HAD-superfamily hydrolase, subfamily IIA M001_018140 IPR015797 NUDIX hydrolase-like domain superfamily M001_018140 IPR020476 NUDIX hydrolase M001_018140 IPR000086 NUDIX hydrolase domain M001_018140 IPR020084 NUDIX hydrolase, conserved site M001_018140 IPR023214 HAD superfamily M001_018140 IPR036412 HAD-like superfamily M001_018155 IPR019888 Transcription regulator AsnC-type M001_018155 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M001_018155 IPR011991 ArsR-like helix-turn-helix domain M001_018155 IPR036388 Winged helix-like DNA-binding domain superfamily M001_018155 IPR036390 Winged helix DNA-binding domain superfamily M001_018155 IPR011008 Dimeric alpha-beta barrel M001_018155 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M001_018155 IPR000485 AsnC-type HTH domain M001_018165 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG M001_018165 IPR036259 MFS transporter superfamily M001_018165 IPR020846 Major facilitator superfamily domain M001_018165 IPR011701 Major facilitator superfamily M001_018165 IPR005829 Sugar transporter, conserved site M001_018170 IPR000150 Cof family M001_018170 IPR036412 HAD-like superfamily M001_018170 IPR006379 HAD-superfamily hydrolase, subfamily IIB M001_018170 IPR023214 HAD superfamily M001_018185 IPR000175 Sodium:neurotransmitter symporter M001_018185 IPR037272 Sodium:neurotransmitter symporter superfamily M001_018195 IPR037272 Sodium:neurotransmitter symporter superfamily M001_018195 IPR000175 Sodium:neurotransmitter symporter M001_018260 IPR013026 Tetratricopeptide repeat-containing domain M001_018260 IPR011990 Tetratricopeptide-like helical domain superfamily M001_018260 IPR019734 Tetratricopeptide repeat M001_018260 IPR014162 Cell division coordinator CpoB, C-terminal M001_018260 IPR034706 Cell division coordinator CpoB M001_018260 IPR032519 YbgF, trimerisation domain M001_018265 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal M001_018265 IPR006664 Outer membrane protein, bacterial M001_018265 IPR006690 Outer membrane protein, OmpA-like, conserved site M001_018265 IPR036737 OmpA-like domain superfamily M001_018265 IPR006665 OmpA-like domain M001_018265 IPR039001 Peptidoglycan-associated lipoprotein M001_018270 IPR036752 TolB, N-terminal domain superfamily M001_018270 IPR007195 TolB, N-terminal M001_018270 IPR014167 Tol-Pal system protein TolB M001_018270 IPR011659 WD40-like Beta Propeller M001_018270 IPR011042 Six-bladed beta-propeller, TolB-like M001_018280 IPR014168 Tol-Pal system protein TolR M001_018280 IPR003400 Biopolymer transport protein ExbD/TolR M001_018285 IPR002898 MotA/TolQ/ExbB proton channel M001_018285 IPR014163 Tol-Pal system, TolQ M001_018290 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family M001_018290 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase M001_018290 IPR006683 Thioesterase domain M001_018290 IPR029069 HotDog domain superfamily M001_018290 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site M001_018295 IPR011846 Cyd operon protein YbgE M001_018300 IPR011724 Cyd operon protein YbgT M001_018300 IPR012994 Membrane bound YbgT-like M001_018305 IPR003317 Cytochrome ubiquinol oxidase subunit 2 M001_018310 IPR002585 Cytochrome ubiquinol oxidase subunit 1 M001_018315 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_018315 IPR008823 RuvB C-terminal winged helix domain M001_018315 IPR036388 Winged helix-like DNA-binding domain superfamily M001_018315 IPR003593 AAA+ ATPase domain M001_018315 IPR036390 Winged helix DNA-binding domain superfamily M001_018315 IPR004605 DNA helicase, Holliday junction RuvB-type M001_018315 IPR041445 RuvB, AAA lid domain M001_018315 IPR008824 RuvB-like P-loop domain M001_018320 IPR000085 Bacterial DNA recombination protein RuvA M001_018320 IPR012340 Nucleic acid-binding, OB-fold M001_018320 IPR010994 RuvA domain 2-like M001_018320 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 M001_018320 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial M001_018320 IPR011114 Holliday junction DNA helicase RuvA, C-terminal M001_018320 IPR036267 RuvA, C-terminal domain superfamily M001_018325 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_018325 IPR003660 HAMP domain M001_018330 IPR004777 L-lysine exporter/arginine exporter M001_018330 IPR001123 Amino acid exporter protein, LeuE-type M001_018335 IPR016032 Signal transduction response regulator, C-terminal effector M001_018335 IPR000792 Transcription regulator LuxR, C-terminal M001_018335 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily M001_018335 IPR036388 Winged helix-like DNA-binding domain superfamily M001_018335 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain M001_018340 IPR016181 Acyl-CoA N-acyltransferase M001_018340 IPR018311 Autoinducer synthesis, conserved site M001_018340 IPR001690 Autoinducer synthase M001_018345 IPR017685 HTH-type transcriptional regulator ArgP M001_018345 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria M001_018345 IPR005119 LysR, substrate-binding M001_018345 IPR000847 Transcription regulator HTH, LysR M001_018345 IPR036390 Winged helix DNA-binding domain superfamily M001_018345 IPR036388 Winged helix-like DNA-binding domain superfamily M001_018350 IPR004476 Ribonuclease II/ribonuclease R M001_018350 IPR001900 Ribonuclease II/R M001_018350 IPR012340 Nucleic acid-binding, OB-fold M001_018350 IPR040476 RNase II/RNase R, cold shock domain M001_018350 IPR013223 Ribonuclease B, N-terminal OB domain M001_018350 IPR022966 Ribonuclease II/R, conserved site M001_018350 IPR011129 Cold shock domain M001_018350 IPR011804 Ribonuclease II M001_018355 IPR001633 EAL domain M001_018355 IPR035919 EAL domain superfamily M001_018355 IPR003018 GAF domain M001_018355 IPR029016 GAF-like domain superfamily M001_018355 IPR000160 GGDEF domain M001_018355 IPR029787 Nucleotide cyclase M001_018355 IPR016132 Phytochrome chromophore attachment domain M001_018355 IPR001294 Phytochrome M001_018355 IPR013515 Phytochrome, central region M001_018365 IPR010976 Beta-phosphoglucomutase hydrolase M001_018365 IPR036412 HAD-like superfamily M001_018365 IPR006439 HAD hydrolase, subfamily IA M001_018365 IPR041492 Haloacid dehalogenase-like hydrolase M001_018365 IPR023214 HAD superfamily M001_018365 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M001_018370 IPR005001 RNA-binding protein Hfq M001_018370 IPR010920 LSM domain superfamily M001_018375 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type M001_018375 IPR007498 Intermembrane transport protein PqiA-like M001_018380 IPR003399 Mce/MlaD M001_018390 IPR010280 (Uracil-5)-methyltransferase family M001_018390 IPR002792 TRAM domain M001_018390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_018390 IPR012340 Nucleic acid-binding, OB-fold M001_018390 IPR030390 RNA methyltransferase TrmA, active site M001_018390 IPR030391 RNA methyltransferase TrmA, conserved site M001_018395 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain M001_018395 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily M001_018395 IPR033730 Prokaryote proline-tRNA ligase core domain M001_018395 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 M001_018395 IPR002316 Proline-tRNA ligase, class IIa M001_018395 IPR036621 Anticodon-binding domain superfamily M001_018395 IPR006195 Aminoacyl-tRNA synthetase, class II M001_018395 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M001_018395 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type M001_018395 IPR004154 Anticodon-binding M001_018400 IPR002347 Short-chain dehydrogenase/reductase SDR M001_018400 IPR036291 NAD(P)-binding domain superfamily M001_018415 IPR029045 ClpP/crotonase-like domain superfamily M001_018415 IPR014748 Enoyl-CoA hydratase, C-terminal M001_018415 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M001_018415 IPR001753 Enoyl-CoA hydratase/isomerase M001_018420 IPR020206 Uncharacterised protein family, VP2110 M001_018425 IPR001451 Hexapeptide repeat M001_018425 IPR018357 Hexapeptide transferase, conserved site M001_018425 IPR011004 Trimeric LpxA-like superfamily M001_018435 IPR000914 Solute-binding protein family 5 domain M001_018435 IPR023765 Solute-binding protein family 5, conserved site M001_018435 IPR030678 Peptide/nickel binding protein, MppA-type M001_018435 IPR039424 Solute-binding protein family 5 M001_018445 IPR003660 HAMP domain M001_018445 IPR013655 PAS fold-3 M001_018445 IPR001610 PAC motif M001_018445 IPR035965 PAS domain superfamily M001_018445 IPR000014 PAS domain M001_018445 IPR004090 Chemotaxis methyl-accepting receptor M001_018445 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_018450 IPR004653 tRNA-dihydrouridine(20/20a) synthase M001_018450 IPR035587 DUS-like, FMN-binding domain M001_018450 IPR013785 Aldolase-type TIM barrel M001_018450 IPR018517 tRNA-dihydrouridine synthase, conserved site M001_018450 IPR001269 tRNA-dihydrouridine synthase M001_018455 IPR002481 Ferric-uptake regulator M001_018455 IPR036390 Winged helix DNA-binding domain superfamily M001_018455 IPR036388 Winged helix-like DNA-binding domain superfamily M001_018470 IPR004685 Branched-chain amino acid transport system II carrier protein M001_018475 IPR004685 Branched-chain amino acid transport system II carrier protein M001_018480 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_018480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_018480 IPR007848 Methyltransferase small domain M001_018480 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase M001_018485 IPR011545 DEAD/DEAH box helicase domain M001_018485 IPR028621 ATP-dependent RNA helicase SrmB M001_018485 IPR014014 RNA helicase, DEAD-box type, Q motif M001_018485 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_018485 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_018485 IPR001650 Helicase, C-terminal M001_018485 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_018490 IPR016181 Acyl-CoA N-acyltransferase M001_018490 IPR000182 GNAT domain M001_018500 IPR004441 RNA methyltransferase TrmH family M001_018500 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M001_018500 IPR013123 RNA 2-O ribose methyltransferase, substrate binding M001_018500 IPR001537 tRNA/rRNA methyltransferase, SpoU type M001_018500 IPR029064 50S ribosomal protein L30e-like M001_018500 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB M001_018500 IPR029028 Alpha/beta knot methyltransferases M001_018520 IPR022966 Ribonuclease II/R, conserved site M001_018520 IPR012340 Nucleic acid-binding, OB-fold M001_018520 IPR003029 S1 domain M001_018520 IPR022967 RNA-binding domain, S1 M001_018520 IPR013223 Ribonuclease B, N-terminal OB domain M001_018520 IPR001900 Ribonuclease II/R M001_018520 IPR040476 RNase II/RNase R, cold shock domain M001_018520 IPR011129 Cold shock domain M001_018520 IPR013668 Ribonuclease R winged-helix domain M001_018520 IPR011805 Ribonuclease R M001_018520 IPR004476 Ribonuclease II/ribonuclease R M001_018525 IPR029787 Nucleotide cyclase M001_018525 IPR000160 GGDEF domain M001_018530 IPR000498 Outer membrane protein OmpA-like, transmembrane domain M001_018530 IPR036737 OmpA-like domain superfamily M001_018530 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M001_018530 IPR006690 Outer membrane protein, OmpA-like, conserved site M001_018530 IPR006665 OmpA-like domain M001_018530 IPR002368 Outer membrane protein, OmpA M001_018530 IPR006664 Outer membrane protein, bacterial M001_018535 IPR001087 GDSL lipase/esterase M001_018535 IPR036514 SGNH hydrolase superfamily M001_018535 IPR008265 Lipase, GDSL, active site M001_018540 IPR016052 Bacteriophage 933W, L0136 M001_018540 IPR005220 Bacterial OB-fold M001_018540 IPR036700 Bacterial OB-fold superfamily M001_018545 IPR000189 Prokaryotic transglycosylase, active site M001_018545 IPR008258 Transglycosylase SLT domain 1 M001_018545 IPR023664 Murein transglycosylase-C M001_018545 IPR024570 Murein transglycosylase-C, N-terminal M001_018545 IPR023346 Lysozyme-like domain superfamily M001_018550 IPR007457 Fe(II) trafficking protein YggX M001_018550 IPR036766 Fe(II) trafficking protein YggX superfamily M001_018555 IPR005760 A/G-specific adenine glycosylase MutY M001_018555 IPR015797 NUDIX hydrolase-like domain superfamily M001_018555 IPR000445 Helix-hairpin-helix motif M001_018555 IPR004036 Endonuclease III-like, conserved site-2 M001_018555 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif M001_018555 IPR004035 Endonuclease III, iron-sulphur binding site M001_018555 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal M001_018555 IPR003265 HhH-GPD domain M001_018555 IPR011257 DNA glycosylase M001_018555 IPR029119 MutY, C-terminal M001_018560 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain M001_018560 IPR002646 Poly A polymerase, head domain M001_018560 IPR006674 HD domain M001_018560 IPR003607 HD/PDEase domain M001_018560 IPR012006 tRNA nucleotidyltransferase, proteobacteria M001_018565 IPR000060 BCCT transporter family M001_018565 IPR018093 BCCT transporter, conserved site M001_018580 IPR023381 YP001051499.1-like domain superfamily M001_018580 IPR007338 Protein of unknown function DUF416 M001_018585 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M001_018585 IPR036291 NAD(P)-binding domain superfamily M001_018585 IPR023514 Glyoxylate/hydroxypyruvate reductase A M001_018590 IPR011055 Duplicated hybrid motif M001_018590 IPR018392 LysM domain M001_018590 IPR013731 Opacity-associated protein A, N-terminal M001_018590 IPR016047 Peptidase M23 M001_018610 IPR006127 Periplasmic solute binding protein, ZnuA-like M001_018610 IPR035520 High-affinity zinc uptake system protein ZnuA M001_018610 IPR006128 Adhesion lipoprotein M001_018615 IPR017882 Zinc import ATP-binding protein ZnuC M001_018615 IPR003593 AAA+ ATPase domain M001_018615 IPR003439 ABC transporter-like M001_018615 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_018615 IPR017871 ABC transporter, conserved site M001_018620 IPR001626 ABC transporter, TroCD-like M001_018620 IPR037294 ABC transporter, BtuC-like M001_018625 IPR005119 LysR, substrate-binding M001_018625 IPR036390 Winged helix DNA-binding domain superfamily M001_018625 IPR036388 Winged helix-like DNA-binding domain superfamily M001_018625 IPR000847 Transcription regulator HTH, LysR M001_018630 IPR000620 EamA domain M001_018635 IPR005122 Uracil-DNA glycosylase-like M001_018635 IPR036895 Uracil-DNA glycosylase-like domain superfamily M001_018640 IPR004626 RarD protein M001_018640 IPR000620 EamA domain M001_018650 IPR035901 GIY-YIG endonuclease superfamily M001_018650 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease M001_018650 IPR000305 GIY-YIG endonuclease M001_018665 IPR014319 Phage shock protein, PspA M001_018665 IPR007157 PspA/IM30 M001_018670 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase M001_018670 IPR002123 Phospholipid/glycerol acyltransferase M001_018690 IPR017937 Thioredoxin, conserved site M001_018690 IPR013766 Thioredoxin domain M001_018690 IPR036249 Thioredoxin-like superfamily M001_018690 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M001_018695 IPR005119 LysR, substrate-binding M001_018695 IPR036388 Winged helix-like DNA-binding domain superfamily M001_018695 IPR036390 Winged helix DNA-binding domain superfamily M001_018695 IPR000847 Transcription regulator HTH, LysR M001_018705 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_018705 IPR002347 Short-chain dehydrogenase/reductase SDR M001_018705 IPR036291 NAD(P)-binding domain superfamily M001_018710 IPR002939 Chaperone DnaJ, C-terminal M001_018710 IPR001623 DnaJ domain M001_018710 IPR012724 Chaperone DnaJ M001_018710 IPR036869 Chaperone J-domain superfamily M001_018710 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily M001_018710 IPR001305 Heat shock protein DnaJ, cysteine-rich domain M001_018710 IPR008971 HSP40/DnaJ peptide-binding M001_018710 IPR018253 DnaJ domain, conserved site M001_018735 IPR036259 MFS transporter superfamily M001_018735 IPR005279 Dipeptide/tripeptide permease M001_018735 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site M001_018735 IPR000109 Proton-dependent oligopeptide transporter family M001_018735 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B M001_018740 IPR005829 Sugar transporter, conserved site M001_018740 IPR036259 MFS transporter superfamily M001_018740 IPR020846 Major facilitator superfamily domain M001_018740 IPR011701 Major facilitator superfamily M001_018740 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG M001_018745 IPR036388 Winged helix-like DNA-binding domain superfamily M001_018745 IPR000847 Transcription regulator HTH, LysR M001_018745 IPR005119 LysR, substrate-binding M001_018745 IPR036390 Winged helix DNA-binding domain superfamily M001_018755 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat M001_018755 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M001_018755 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative M001_018755 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal M001_018755 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M001_018755 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily M001_018755 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta M001_018760 IPR003594 Histidine kinase/HSP90-like ATPase M001_018760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_018760 IPR006171 TOPRIM domain M001_018760 IPR020568 Ribosomal protein S5 domain 2-type fold M001_018760 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_018760 IPR002288 DNA gyrase B subunit, C-terminal M001_018760 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 M001_018760 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative M001_018760 IPR018522 DNA topoisomerase, type IIA, conserved site M001_018760 IPR001241 DNA topoisomerase, type IIA M001_018760 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal M001_018760 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M001_018765 IPR029058 Alpha/Beta hydrolase fold M001_018765 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA M001_018770 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA M001_018770 IPR029052 Metallo-dependent phosphatase-like M001_018770 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M001_018775 IPR009659 Protein of unknown function DUF1249 M001_018780 IPR020084 NUDIX hydrolase, conserved site M001_018780 IPR000086 NUDIX hydrolase domain M001_018780 IPR004385 Nucleoside diphosphate pyrophosphatase M001_018780 IPR015797 NUDIX hydrolase-like domain superfamily M001_018785 IPR010130 Type I secretion outer membrane protein, TolC M001_018785 IPR003423 Outer membrane efflux protein M001_018790 IPR011914 RfaE bifunctional protein, domain II M001_018790 IPR029056 Ribokinase-like M001_018790 IPR011611 Carbohydrate kinase PfkB M001_018790 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M001_018790 IPR023030 Bifunctional protein HldE M001_018790 IPR004821 Cytidyltransferase-like domain M001_018790 IPR011913 RfaE bifunctional protein, domain I M001_018790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_018795 IPR004960 Bacterial lipid A biosynthesis acyltransferase M001_018795 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase M001_018800 IPR002178 PTS EIIA type-2 domain M001_018800 IPR013014 Phosphotransferase system, EIIC component, type 2 M001_018800 IPR003352 Phosphotransferase system, EIIC M001_018800 IPR029503 Phosphotransferase system EIIB component, mannitol-specific M001_018800 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M001_018800 IPR013011 Phosphotransferase system, EIIB component, type 2 M001_018800 IPR036095 PTS system IIB component-like superfamily M001_018800 IPR016152 Phosphotransferase/anion transporter M001_018800 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC M001_018805 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M001_018805 IPR036291 NAD(P)-binding domain superfamily M001_018805 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_018805 IPR023028 Mannitol-1-phosphate 5-dehydrogenase M001_018805 IPR013131 Mannitol dehydrogenase, N-terminal M001_018805 IPR013118 Mannitol dehydrogenase, C-terminal M001_018805 IPR023027 Mannitol dehydrogenase, conserved site M001_018805 IPR000669 Mannitol dehydrogenase M001_018810 IPR007761 Mannitol repressor MtlR-like M001_018810 IPR038026 MtlR-like superfamily M001_018820 IPR008971 HSP40/DnaJ peptide-binding M001_018820 IPR001305 Heat shock protein DnaJ, cysteine-rich domain M001_018820 IPR012724 Chaperone DnaJ M001_018820 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily M001_018820 IPR002939 Chaperone DnaJ, C-terminal M001_018820 IPR036869 Chaperone J-domain superfamily M001_018820 IPR001623 DnaJ domain M001_018820 IPR018253 DnaJ domain, conserved site M001_018835 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB M001_018835 IPR023714 Zinc transport protein ZntB M001_018840 IPR003791 Protein of unknown function UPF0178 M001_018845 IPR016956 Inner membrane protein YdjM M001_018845 IPR007404 LexA-binding, inner membrane-associated putative hydrolase M001_018850 IPR011657 Concentrative nucleoside transporter C-terminal domain M001_018850 IPR008276 Concentrative nucleoside transporter M001_018850 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial M001_018850 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M001_018850 IPR002668 Concentrative nucleoside transporter N-terminal domain M001_018855 IPR011545 DEAD/DEAH box helicase domain M001_018855 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M001_018855 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_018855 IPR001650 Helicase, C-terminal M001_018855 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain M001_018855 IPR028619 ATP-dependent RNA helicase DbpA M001_018855 IPR014014 RNA helicase, DEAD-box type, Q motif M001_018855 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_018855 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_018875 IPR026046 UbiA prenyltransferase domain containing protein 1 M001_018875 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase M001_018875 IPR000537 UbiA prenyltransferase family M001_018880 IPR004561 Isochorismate synthase M001_018880 IPR034681 Isochorismate synthase MenF M001_018880 IPR015890 Chorismate-utilising enzyme, C-terminal M001_018880 IPR005801 ADC synthase M001_018885 IPR029061 Thiamin diphosphate-binding fold M001_018885 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M001_018885 IPR032264 Menaquinone biosynthesis protein MenD, middle domain M001_018885 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase M001_018885 IPR029035 DHS-like NAD/FAD-binding domain superfamily M001_018885 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M001_018890 IPR029058 Alpha/Beta hydrolase fold M001_018890 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase M001_018890 IPR000073 Alpha/beta hydrolase fold-1 M001_018895 IPR014748 Enoyl-CoA hydratase, C-terminal M001_018895 IPR001753 Enoyl-CoA hydratase/isomerase M001_018895 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M001_018895 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB M001_018895 IPR029045 ClpP/crotonase-like domain superfamily M001_018900 IPR029017 Enolase-like, N-terminal M001_018900 IPR036849 Enolase-like, C-terminal domain superfamily M001_018900 IPR029065 Enolase C-terminal domain-like M001_018900 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal M001_018900 IPR010196 o-Succinylbenzoate synthase, MenC type1 M001_018905 IPR010192 2-succinylbenzoate--CoA ligase M001_018905 IPR000873 AMP-dependent synthetase/ligase M001_018905 IPR020845 AMP-binding, conserved site M001_018905 IPR042099 AMP-dependent synthetase-like superfamily M001_018910 IPR035986 PKD domain superfamily M001_018910 IPR000601 PKD domain M001_018910 IPR022409 PKD/Chitinase domain M001_018910 IPR002169 Peptidase M9A/M9B, collagenase, bacterial M001_018910 IPR013661 Peptidase M9, collagenase, N-terminal domain M001_018910 IPR013783 Immunoglobulin-like fold M001_018915 IPR003848 Domain of unknown function DUF218 M001_018920 IPR001189 Manganese/iron superoxide dismutase M001_018920 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily M001_018920 IPR019831 Manganese/iron superoxide dismutase, N-terminal M001_018920 IPR019832 Manganese/iron superoxide dismutase, C-terminal M001_018920 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily M001_018920 IPR019833 Manganese/iron superoxide dismutase, binding site M001_018930 IPR011006 CheY-like superfamily M001_018930 IPR024181 Chemotaxis response regulator CheV M001_018930 IPR036061 CheW-like domain superfamily M001_018930 IPR002545 CheW-like domain M001_018930 IPR001789 Signal transduction response regulator, receiver domain M001_018940 IPR007807 Helicase domain M001_018940 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain M001_018940 IPR032672 TmcA/NAT10/Kre33 M001_018940 IPR038321 TmcA, C-terminal domain superfamily M001_018940 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal M001_018940 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA M001_018940 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_018940 IPR016181 Acyl-CoA N-acyltransferase M001_018940 IPR000182 GNAT domain M001_018955 IPR008331 Ferritin/DPS protein domain M001_018955 IPR009078 Ferritin-like superfamily M001_018955 IPR009040 Ferritin-like diiron domain M001_018955 IPR002024 Bacterioferritin M001_018955 IPR012347 Ferritin-like M001_018960 IPR004363 Methylglyoxal synthase M001_018960 IPR018148 Methylglyoxal synthase, active site M001_018960 IPR036914 Methylglyoxal synthase-like domain superfamily M001_018960 IPR011607 Methylglyoxal synthase-like domain M001_018965 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M001_018965 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M001_018975 IPR005322 Peptidase C69, dipeptidase A M001_018980 IPR036291 NAD(P)-binding domain superfamily M001_018980 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_018980 IPR002347 Short-chain dehydrogenase/reductase SDR M001_019000 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain M001_019000 IPR013780 Glycosyl hydrolase, all-beta M001_019000 IPR017853 Glycoside hydrolase superfamily M001_019000 IPR032091 Maltogenic Amylase, C-terminal M001_019000 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M001_019000 IPR013783 Immunoglobulin-like fold M001_019020 IPR000917 Sulfatase, N-terminal M001_019020 IPR012160 Lipoteichoic acid synthase-like M001_019020 IPR017850 Alkaline-phosphatase-like, core domain superfamily M001_019025 IPR036390 Winged helix DNA-binding domain superfamily M001_019025 IPR011008 Dimeric alpha-beta barrel M001_019025 IPR019888 Transcription regulator AsnC-type M001_019025 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M001_019025 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M001_019025 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019025 IPR000485 AsnC-type HTH domain M001_019035 IPR005697 Homoserine O-succinyltransferase MetA M001_019035 IPR033752 MetA family M001_019035 IPR029062 Class I glutamine amidotransferase-like M001_019045 IPR036425 MoaB/Mog-like domain superfamily M001_019045 IPR001453 MoaB/Mog domain M001_019045 IPR036653 CinA-like, C-terminal M001_019045 IPR008135 Competence-induced protein CinA M001_019045 IPR008136 CinA, C-terminal M001_019055 IPR023214 HAD superfamily M001_019055 IPR000150 Cof family M001_019055 IPR006379 HAD-superfamily hydrolase, subfamily IIB M001_019055 IPR036412 HAD-like superfamily M001_019065 IPR007458 Protein of unknown function DUF496 M001_019100 IPR014710 RmlC-like jelly roll fold M001_019100 IPR011051 RmlC-like cupin domain superfamily M001_019100 IPR013096 Cupin 2, conserved barrel M001_019100 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_019100 IPR001387 Cro/C1-type helix-turn-helix domain M001_019105 IPR004711 Benzoate transporter M001_019115 IPR004620 5,10-methylenetetrahydrofolate reductase M001_019115 IPR003171 Methylenetetrahydrofolate reductase M001_019115 IPR029041 FAD-linked oxidoreductase-like M001_019130 IPR003660 HAMP domain M001_019130 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_019135 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M001_019135 IPR005618 Outer membrane protein, OmpW M001_019140 IPR033424 Membrane-associated sensor domain M001_019140 IPR029787 Nucleotide cyclase M001_019140 IPR000160 GGDEF domain M001_019145 IPR041552 UvrA DNA-binding domain M001_019145 IPR041102 UvrA, interaction domain M001_019145 IPR004602 UvrABC system subunit A M001_019145 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019145 IPR017871 ABC transporter, conserved site M001_019145 IPR003439 ABC transporter-like M001_019165 IPR005534 Curli production assembly/transport component CsgG M001_019175 IPR018900 Curli assembly protein CsgE M001_019180 IPR000792 Transcription regulator LuxR, C-terminal M001_019180 IPR016032 Signal transduction response regulator, C-terminal effector M001_019180 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019185 IPR012340 Nucleic acid-binding, OB-fold M001_019185 IPR011344 Single-stranded DNA-binding protein M001_019185 IPR000424 Primosome PriB/single-strand DNA-binding M001_019195 IPR002524 Cation efflux protein M001_019195 IPR027470 Cation efflux protein, cytoplasmic domain M001_019195 IPR036837 Cation efflux protein, cytoplasmic domain superfamily M001_019195 IPR027469 Cation efflux transmembrane domain superfamily M001_019205 IPR012156 Cold shock, CspA M001_019205 IPR011129 Cold shock domain M001_019205 IPR019844 Cold-shock (CSD) domain M001_019205 IPR002059 Cold-shock protein, DNA-binding M001_019205 IPR012340 Nucleic acid-binding, OB-fold M001_019210 IPR006043 Xanthine/uracil/vitamin C permease M001_019220 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 M001_019220 IPR004006 DhaK domain M001_019225 IPR004007 DhaL domain M001_019225 IPR012737 Dihydroxyacetone kinase, subunit L M001_019225 IPR036117 DhaL domain superfamily M001_019230 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily M001_019230 IPR039643 Dihydroxyacetone kinase phosphotransferase subunit DhaM M001_019230 IPR036618 PtsI, HPr-binding domain superfamily M001_019230 IPR000032 Phosphocarrier protein HPr-like M001_019230 IPR036637 Phosphohistidine domain superfamily M001_019230 IPR008279 PEP-utilising enzyme, mobile domain M001_019230 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M001_019230 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain M001_019230 IPR035895 HPr-like superfamily M001_019230 IPR004701 Phosphotransferase system, mannose-type IIA component M001_019230 IPR008731 Phosphotransferase system, enzyme I N-terminal M001_019235 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M001_019235 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M001_019235 IPR016205 Glycerol dehydrogenase M001_019240 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_019240 IPR013767 PAS fold M001_019240 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_019240 IPR029016 GAF-like domain superfamily M001_019240 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_019240 IPR009057 Homeobox-like domain superfamily M001_019240 IPR002197 DNA binding HTH domain, Fis-type M001_019240 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019240 IPR000014 PAS domain M001_019240 IPR035965 PAS domain superfamily M001_019240 IPR003593 AAA+ ATPase domain M001_019255 IPR002549 Transmembrane protein TqsA-like M001_019260 IPR033879 Undecaprenyl-diphosphatase M001_019260 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M001_019260 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M001_019270 IPR002942 RNA-binding S4 domain M001_019270 IPR025708 Heat shock protein 15 M001_019270 IPR036986 RNA-binding S4 domain superfamily M001_019275 IPR016153 Heat shock protein Hsp33, N-terminal M001_019275 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily M001_019275 IPR000397 Heat shock protein Hsp33 M001_019275 IPR016154 Heat shock protein Hsp33, C-terminal M001_019285 IPR036390 Winged helix DNA-binding domain superfamily M001_019285 IPR008920 Transcription regulator FadR/GntR, C-terminal M001_019285 IPR000524 Transcription regulator HTH, GntR M001_019285 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019290 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M001_019290 IPR036005 Creatinase/aminopeptidase-like M001_019290 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site M001_019290 IPR000994 Peptidase M24 M001_019290 IPR000587 Creatinase, N-terminal M001_019295 IPR020483 Uncharacterised protein family YgbA M001_019300 IPR016181 Acyl-CoA N-acyltransferase M001_019300 IPR023072 Acetyltransferase, YpeA M001_019300 IPR000182 GNAT domain M001_019305 IPR008816 Glycine zipper 2TM domain M001_019310 IPR001905 Ammonium transporter M001_019310 IPR024041 Ammonium transporter AmtB-like domain M001_019310 IPR018047 Ammonium transporter, conserved site M001_019310 IPR029020 Ammonium/urea transporter M001_019315 IPR000160 GGDEF domain M001_019315 IPR029787 Nucleotide cyclase M001_019325 IPR010331 Exopolysaccharide synthesis, ExoD M001_019330 IPR004694 Hydroxy amino acid transporter M001_019335 IPR033416 Periplasmic sensor domain CHASE7 M001_019335 IPR000160 GGDEF domain M001_019335 IPR029787 Nucleotide cyclase M001_019345 IPR011004 Trimeric LpxA-like superfamily M001_019345 IPR018357 Hexapeptide transferase, conserved site M001_019345 IPR001451 Hexapeptide repeat M001_019365 IPR034428 ThiH/NocL/HydG-like M001_019365 IPR010722 Biotin and thiamin synthesis-associated domain M001_019365 IPR013785 Aldolase-type TIM barrel M001_019365 IPR012726 Thiazole biosynthesis ThiH M001_019365 IPR007197 Radical SAM M001_019370 IPR013785 Aldolase-type TIM barrel M001_019370 IPR033983 Thiazole synthase ThiG M001_019370 IPR008867 Thiazole synthase M001_019380 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF M001_019380 IPR035985 Ubiquitin-activating enzyme M001_019380 IPR000594 THIF-type NAD/FAD binding fold M001_019385 IPR022998 Thiamine phosphate synthase/TenI M001_019385 IPR013785 Aldolase-type TIM barrel M001_019385 IPR034291 Thiamine phosphate synthase M001_019385 IPR036206 Thiamin phosphate synthase superfamily M001_019390 IPR037509 Phosphomethylpyrimidine synthase M001_019390 IPR038521 ThiC/Bza superfamily M001_019390 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B M001_019390 IPR025747 ThiC-associated domain M001_019395 IPR016185 Pre-ATP-grasp domain superfamily M001_019395 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain M001_019405 IPR007140 Protein of unknown function DUF350 M001_019410 IPR005830 Aerolysin M001_019410 IPR005831 Aerolysin/haemolysin toxin, conserved site M001_019410 IPR016187 C-type lectin fold M001_019410 IPR005138 Aerolysin/Pertussis toxin domain M001_019410 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily M001_019425 IPR011006 CheY-like superfamily M001_019425 IPR039420 Transcriptional regulatory protein WalR-like M001_019425 IPR001789 Signal transduction response regulator, receiver domain M001_019425 IPR001867 OmpR/PhoB-type DNA-binding domain M001_019425 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019430 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_019430 IPR005467 Histidine kinase domain M001_019430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_019430 IPR003594 Histidine kinase/HSP90-like ATPase M001_019430 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_019435 IPR011761 ATP-grasp fold M001_019435 IPR013651 ATP-grasp fold, RimK-type M001_019435 IPR013815 ATP-grasp fold, subdomain 1 M001_019435 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK M001_019435 IPR041107 RimK, PreATP-grasp domain M001_019435 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX M001_019440 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain M001_019440 IPR006158 Cobalamin (vitamin B12)-binding domain M001_019440 IPR036724 Cobalamin-binding domain superfamily M001_019440 IPR011005 Dihydropteroate synthase-like M001_019440 IPR036589 Homocysteine-binding domain superfamily M001_019440 IPR003726 Homocysteine-binding domain M001_019440 IPR011822 Cobalamin-dependent methionine synthase M001_019440 IPR036594 Methionine synthase domain M001_019440 IPR000489 Pterin-binding domain M001_019440 IPR004223 Vitamin B12-dependent methionine synthase, activation domain M001_019440 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily M001_019440 IPR033706 Methionine synthase, B12-binding domain M001_019445 IPR038770 Sodium/solute symporter superfamily M001_019445 IPR018422 Cation/H+ exchanger, CPA1 family M001_019445 IPR006153 Cation/H+ exchanger M001_019470 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA M001_019470 IPR005519 Acid phosphatase, class B-like M001_019470 IPR036412 HAD-like superfamily M001_019470 IPR023214 HAD superfamily M001_019480 IPR005829 Sugar transporter, conserved site M001_019480 IPR036259 MFS transporter superfamily M001_019480 IPR020846 Major facilitator superfamily domain M001_019480 IPR011701 Major facilitator superfamily M001_019485 IPR002771 Multiple antibiotic resistance (MarC)-related M001_019495 IPR025502 TldD M001_019495 IPR035068 Metalloprotease TldD/PmbA, N-terminal M001_019495 IPR036059 Metalloprotease TldD/PmbA superfamily M001_019495 IPR002510 Metalloprotease TldD/PmbA M001_019500 IPR003010 Carbon-nitrogen hydrolase M001_019500 IPR036526 Carbon-nitrogen hydrolase superfamily M001_019500 IPR001110 Uncharacterised protein family UPF0012, conserved site M001_019510 IPR032712 AsmA-like, C-terminal M001_019510 IPR011836 Conserved hypothetical protein CHP02099 M001_019510 IPR025263 Domain of unknown function DUF3971 M001_019515 IPR003029 S1 domain M001_019515 IPR022967 RNA-binding domain, S1 M001_019515 IPR004659 Ribonuclease E/G M001_019515 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G M001_019515 IPR012340 Nucleic acid-binding, OB-fold M001_019520 IPR029001 Inosine triphosphate pyrophosphatase-like M001_019520 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein M001_019525 IPR026034 Cell shape-determining protein MreD, proteobacterial type M001_019525 IPR007227 Cell shape-determining protein MreD M001_019530 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 M001_019530 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 M001_019530 IPR007221 Rod shape-determining protein MreC M001_019535 IPR004753 Cell shape determining protein MreB M001_019560 IPR012902 Prokaryotic N-terminal methylation site M001_019560 IPR028188 Type IV pilin PilA M001_019565 IPR001082 Fimbrial protein pilin M001_019565 IPR012902 Prokaryotic N-terminal methylation site M001_019580 IPR018076 Type II secretion system F domain M001_019580 IPR011850 General secretion pathway protein F M001_019580 IPR001992 Type II secretion system conserved site M001_019580 IPR042094 Type II secretion system F domain superfamily M001_019580 IPR003004 GspF/PilC family M001_019585 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019585 IPR001482 Type II/IV secretion system protein M001_019585 IPR007831 General secretory system II, protein E, N-terminal M001_019585 IPR013369 Type II secretion system GspE M001_019585 IPR003593 AAA+ ATPase domain M001_019585 IPR042181 Type II secretion system, protein E, N-terminal M001_019585 IPR037257 General secretory system II, protein E, N-terminal superfamily M001_019600 IPR001775 GspD/PilQ family M001_019600 IPR013356 Type II secretion system GspD M001_019600 IPR004845 Type II secretion system GspD, conserved site M001_019600 IPR005644 NolW-like M001_019600 IPR038591 NolW-like superfamily M001_019600 IPR004846 Type II/III secretion system M001_019630 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 M001_019630 IPR029787 Nucleotide cyclase M001_019630 IPR000160 GGDEF domain M001_019630 IPR001633 EAL domain M001_019630 IPR035919 EAL domain superfamily M001_019635 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M001_019635 IPR001633 EAL domain M001_019635 IPR035919 EAL domain superfamily M001_019640 IPR004837 Sodium/calcium exchanger membrane region M001_019640 IPR004713 Calcium/proton exchanger M001_019645 IPR001106 Aromatic amino acid lyase M001_019645 IPR024083 Fumarase/histidase, N-terminal M001_019645 IPR022313 Phenylalanine/histidine ammonia-lyases, active site M001_019645 IPR008948 L-Aspartase-like M001_019645 IPR005921 Histidine ammonia-lyase M001_019650 IPR035401 Urocanase, C-terminal domain M001_019650 IPR038364 Urocanase, central domain superfamily M001_019650 IPR023636 Urocanase conserved site M001_019650 IPR023637 Urocanase M001_019650 IPR035085 Urocanase, Rossmann-like domain M001_019650 IPR036190 Urocanase superfamily M001_019650 IPR035400 Urocanase, N-terminal domain M001_019655 IPR006035 Ureohydrolase M001_019655 IPR020855 Ureohydrolase, manganese-binding site M001_019655 IPR005923 Formiminoglutamase M001_019655 IPR023696 Ureohydrolase domain superfamily M001_019660 IPR005920 Imidazolonepropionase M001_019660 IPR032466 Metal-dependent hydrolase M001_019660 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_019660 IPR006680 Amidohydrolase-related M001_019665 IPR000524 Transcription regulator HTH, GntR M001_019665 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M001_019665 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019665 IPR010248 Histidine utilization repressor M001_019665 IPR036390 Winged helix DNA-binding domain superfamily M001_019665 IPR011663 UbiC transcription regulator-associated M001_019670 IPR001765 Carbonic anhydrase M001_019670 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site M001_019670 IPR036874 Carbonic anhydrase superfamily M001_019675 IPR007627 RNA polymerase sigma-70 region 2 M001_019675 IPR007630 RNA polymerase sigma-70 region 4 M001_019675 IPR014284 RNA polymerase sigma-70 like domain M001_019675 IPR000943 RNA polymerase sigma-70 M001_019675 IPR013325 RNA polymerase sigma factor, region 2 M001_019675 IPR013324 RNA polymerase sigma factor, region 3/4-like M001_019675 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria M001_019675 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019675 IPR009042 RNA polymerase sigma-70 region 1.2 M001_019680 IPR004513 Cell division protein FtsX M001_019680 IPR040690 FtsX, extracellular domain M001_019685 IPR003439 ABC transporter-like M001_019685 IPR003593 AAA+ ATPase domain M001_019685 IPR005286 Cell division protein FtsE, ATP-binding M001_019685 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019685 IPR017871 ABC transporter, conserved site M001_019690 IPR003593 AAA+ ATPase domain M001_019690 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019690 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M001_019690 IPR013822 Signal recognition particle SRP54, helical bundle M001_019690 IPR004390 Signal-recognition particle receptor FtsY M001_019690 IPR036225 SRP/SRP receptor, N-terminal M001_019690 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily M001_019695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_019695 IPR004398 RNA methyltransferase, RsmD M001_019695 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_019715 IPR003148 Regulator of K+ conductance, N-terminal M001_019715 IPR036291 NAD(P)-binding domain superfamily M001_019715 IPR038770 Sodium/solute symporter superfamily M001_019715 IPR020884 Glutathione-regulated potassium-efflux system protein KefB M001_019715 IPR004771 K+/H+ exchanger M001_019715 IPR006153 Cation/H+ exchanger M001_019720 IPR003680 Flavodoxin-like fold M001_019720 IPR029039 Flavoprotein-like superfamily M001_019720 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG M001_019725 IPR036390 Winged helix DNA-binding domain superfamily M001_019725 IPR005119 LysR, substrate-binding M001_019725 IPR000847 Transcription regulator HTH, LysR M001_019725 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019730 IPR002347 Short-chain dehydrogenase/reductase SDR M001_019730 IPR036291 NAD(P)-binding domain superfamily M001_019730 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_019745 IPR002471 Peptidase S9, serine active site M001_019745 IPR023302 Peptidase S9A, N-terminal domain M001_019745 IPR002470 Peptidase S9A, prolyl oligopeptidase M001_019745 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain M001_019745 IPR029058 Alpha/Beta hydrolase fold M001_019760 IPR030871 Cardiolipin synthase C M001_019760 IPR025202 Phospholipase D-like domain M001_019760 IPR001736 Phospholipase D/Transphosphatidylase M001_019770 IPR023703 Membrane-bound lytic murein transglycosylase F M001_019770 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_019770 IPR000189 Prokaryotic transglycosylase, active site M001_019770 IPR008258 Transglycosylase SLT domain 1 M001_019770 IPR023346 Lysozyme-like domain superfamily M001_019780 IPR003369 Sec-independent protein translocase protein TatA/B/E M001_019780 IPR006312 Sec-independent protein translocase protein TatA/E M001_019785 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain M001_019785 IPR005119 LysR, substrate-binding M001_019785 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019785 IPR023746 Transcription regulator HTH, YidZ M001_019785 IPR036390 Winged helix DNA-binding domain superfamily M001_019785 IPR000847 Transcription regulator HTH, LysR M001_019790 IPR002771 Multiple antibiotic resistance (MarC)-related M001_019795 IPR019620 Putative metal-binding protein M001_019800 IPR036458 Sodium:dicarboxylate symporter superfamily M001_019800 IPR018107 Sodium:dicarboxylate symporter, conserved site M001_019800 IPR001991 Sodium:dicarboxylate symporter M001_019800 IPR033380 Glutamate-aspartate symport protein GltP/GltT M001_019810 IPR036390 Winged helix DNA-binding domain superfamily M001_019810 IPR036388 Winged helix-like DNA-binding domain superfamily M001_019810 IPR000847 Transcription regulator HTH, LysR M001_019810 IPR005119 LysR, substrate-binding M001_019815 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M001_019820 IPR004638 Drug resistance transporter EmrB-like M001_019820 IPR011701 Major facilitator superfamily M001_019820 IPR036259 MFS transporter superfamily M001_019820 IPR020846 Major facilitator superfamily domain M001_019825 IPR012506 YhhN-like M001_019840 IPR009057 Homeobox-like domain superfamily M001_019840 IPR023764 Transcriptional repressor HTH, FabR M001_019840 IPR001647 DNA-binding HTH domain, TetR-type M001_019885 IPR006549 HAD-superfamily hydrolase,subfamily IIIA M001_019885 IPR036412 HAD-like superfamily M001_019885 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase M001_019885 IPR006543 Histidinol-phosphate phosphatase M001_019885 IPR023214 HAD superfamily M001_019890 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019890 IPR005225 Small GTP-binding protein domain M001_019890 IPR009000 Translation protein, beta-barrel domain superfamily M001_019890 IPR000795 Transcription factor, GTP-binding domain M001_019890 IPR033720 Elongation factor Tu, domain 2 M001_019890 IPR004161 Translation elongation factor EFTu-like, domain 2 M001_019890 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain M001_019890 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle M001_019890 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal M001_019890 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M001_019890 IPR031157 Tr-type G domain, conserved site M001_019895 IPR000795 Transcription factor, GTP-binding domain M001_019895 IPR005225 Small GTP-binding protein domain M001_019895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_019895 IPR000640 Elongation factor EFG, domain V-like M001_019895 IPR004161 Translation elongation factor EFTu-like, domain 2 M001_019895 IPR031157 Tr-type G domain, conserved site M001_019895 IPR035649 EFG, domain V M001_019895 IPR020568 Ribosomal protein S5 domain 2-type fold M001_019895 IPR005517 Translation elongation factor EFG/EF2, domain IV M001_019895 IPR035647 EF-G domain III/V-like M001_019895 IPR009022 Elongation factor G, domain III M001_019895 IPR041095 Elongation Factor G, domain II M001_019895 IPR004540 Translation elongation factor EFG/EF2 M001_019895 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019895 IPR009000 Translation protein, beta-barrel domain superfamily M001_019900 IPR020606 Ribosomal protein S7, conserved site M001_019900 IPR005717 Ribosomal protein S7, bacterial/organellar-type M001_019900 IPR000235 Ribosomal protein S5/S7 M001_019900 IPR023798 Ribosomal protein S7 domain M001_019900 IPR036823 Ribosomal protein S7 domain superfamily M001_019905 IPR012340 Nucleic acid-binding, OB-fold M001_019905 IPR006032 Ribosomal protein S12/S23 M001_019905 IPR005679 Ribosomal protein S12, bacterial-type M001_019910 IPR027396 DsrEFH-like M001_019910 IPR023526 Sulphur relay, TusB M001_019910 IPR007215 Sulphur relay, TusB/DsrH M001_019915 IPR003787 Sulphur relay, DsrE/F-like protein M001_019915 IPR027396 DsrEFH-like M001_019915 IPR037450 Sulphur relay, TusC M001_019915 IPR017462 Sulphur relay, TusC/DsrF M001_019920 IPR017463 Sulphur relay, TusD/DsrE M001_019920 IPR003787 Sulphur relay, DsrE/F-like protein M001_019920 IPR027396 DsrEFH-like M001_019925 IPR006175 YjgF/YER057c/UK114 family M001_019925 IPR035959 RutC-like superfamily M001_019925 IPR006056 RidA family M001_019925 IPR019897 RidA, conserved site M001_019930 IPR039446 Transcriptional regulator DauR-like M001_019930 IPR039445 Transcriptional regulator DauR-like, HTH domain M001_019930 IPR013559 YheO-like M001_019935 IPR000722 RNA polymerase, alpha subunit M001_019935 IPR006592 RNA polymerase, N-terminal M001_019935 IPR007080 RNA polymerase Rpb1, domain 1 M001_019935 IPR007066 RNA polymerase Rpb1, domain 3 M001_019935 IPR007081 RNA polymerase Rpb1, domain 5 M001_019935 IPR007083 RNA polymerase Rpb1, domain 4 M001_019935 IPR042102 RNA polymerase Rpb1, domain 3 superfamily M001_019935 IPR038120 RNA polymerase Rpb1, funnel domain superfamily M001_019935 IPR012754 DNA-directed RNA polymerase, subunit beta-prime M001_019940 IPR007644 RNA polymerase, beta subunit, protrusion M001_019940 IPR014724 RNA polymerase Rpb2, OB-fold M001_019940 IPR007642 RNA polymerase Rpb2, domain 2 M001_019940 IPR037034 RNA polymerase Rpb2, domain 2 superfamily M001_019940 IPR007121 RNA polymerase, beta subunit, conserved site M001_019940 IPR007645 RNA polymerase Rpb2, domain 3 M001_019940 IPR007641 RNA polymerase Rpb2, domain 7 M001_019940 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type M001_019940 IPR015712 DNA-directed RNA polymerase, subunit 2 M001_019940 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily M001_019940 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain M001_019940 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain M001_019940 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily M001_019945 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M001_019945 IPR000206 Ribosomal protein L7/L12 M001_019945 IPR008932 Ribosomal protein L7/L12, oligomerisation M001_019945 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily M001_019945 IPR013823 Ribosomal protein L7/L12, C-terminal M001_019950 IPR022973 Ribosomal protein L10 M001_019950 IPR002363 Ribosomal protein L10, eubacterial, conserved site M001_019950 IPR001790 Ribosomal protein L10P M001_019955 IPR005878 Ribosomal protein L1, bacterial-type M001_019955 IPR023674 Ribosomal protein L1-like M001_019955 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich M001_019955 IPR023673 Ribosomal protein L1, conserved site M001_019955 IPR002143 Ribosomal protein L1 M001_019955 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein M001_019960 IPR000911 Ribosomal protein L11/L12 M001_019960 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily M001_019960 IPR020784 Ribosomal protein L11, N-terminal M001_019960 IPR020783 Ribosomal protein L11, C-terminal M001_019960 IPR036769 Ribosomal protein L11, C-terminal domain superfamily M001_019960 IPR020785 Ribosomal protein L11, conserved site M001_019960 IPR006519 Ribosomal protein L11, bacterial-type M001_019965 IPR006645 NusG, N-terminal M001_019965 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site M001_019965 IPR001062 Transcription antitermination protein, NusG M001_019965 IPR014722 Ribosomal protein L2, domain 2 M001_019965 IPR005824 KOW M001_019965 IPR008991 Translation protein SH3-like domain superfamily M001_019965 IPR036735 NusG, N-terminal domain superfamily M001_019970 IPR005807 SecE subunit of protein translocation complex, bacterial-like M001_019970 IPR038379 SecE superfamily M001_019970 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit M001_019980 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M001_019980 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal M001_019980 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle M001_019980 IPR009000 Translation protein, beta-barrel domain superfamily M001_019980 IPR000795 Transcription factor, GTP-binding domain M001_019980 IPR005225 Small GTP-binding protein domain M001_019980 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain M001_019980 IPR004161 Translation elongation factor EFTu-like, domain 2 M001_019980 IPR033720 Elongation factor Tu, domain 2 M001_019980 IPR031157 Tr-type G domain, conserved site M001_019980 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019995 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_019995 IPR004566 Pantothenate kinase M001_019995 IPR006083 Phosphoribulokinase/uridine kinase M001_020000 IPR004408 Biotin--acetyl-CoA-carboxylase ligase M001_020000 IPR036390 Winged helix DNA-binding domain superfamily M001_020000 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020000 IPR004409 Biotin operon repressor, helix-turn-helix domain M001_020000 IPR008988 Transcriptional repressor, C-terminal M001_020000 IPR013196 Helix-turn-helix, type 11 M001_020000 IPR030855 Bifunctional ligase/repressor BirA M001_020000 IPR003142 Biotin protein ligase, C-terminal M001_020000 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M001_020005 IPR016169 FAD-binding, type PCMH, subdomain 2 M001_020005 IPR006094 FAD linked oxidase, N-terminal M001_020005 IPR016167 FAD-binding, type PCMH, subdomain 1 M001_020005 IPR036318 FAD-binding, type PCMH-like superfamily M001_020005 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase M001_020005 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal M001_020005 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily M001_020005 IPR016166 FAD-binding domain, PCMH-type M001_020010 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M001_020010 IPR036291 NAD(P)-binding domain superfamily M001_020010 IPR006037 Regulator of K+ conductance, C-terminal M001_020010 IPR003148 Regulator of K+ conductance, N-terminal M001_020015 IPR004772 TrkH potassium transport family M001_020015 IPR003445 Cation transporter M001_020035 IPR013497 DNA topoisomerase, type IA, central M001_020035 IPR006171 TOPRIM domain M001_020035 IPR034144 DNA topoisomerase 3-like, TOPRIM domain M001_020035 IPR023406 DNA topoisomerase, type IA, active site M001_020035 IPR023405 DNA topoisomerase, type IA, core domain M001_020035 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M001_020035 IPR003601 DNA topoisomerase, type IA, domain 2 M001_020035 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M001_020035 IPR000380 DNA topoisomerase, type IA M001_020035 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M001_020035 IPR003602 DNA topoisomerase, type IA, DNA-binding domain M001_020035 IPR005738 DNA topoisomerase III M001_020045 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_020045 IPR005467 Histidine kinase domain M001_020045 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_020045 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_020045 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_020045 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_020045 IPR003594 Histidine kinase/HSP90-like ATPase M001_020050 IPR036280 Multiheme cytochrome superfamily M001_020050 IPR005126 NapC/NirT cytochrome c, N-terminal M001_020050 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK M001_020050 IPR011031 Multihaem cytochrome M001_020050 IPR038266 NapC/NirT cytochrome c superfamily M001_020055 IPR006657 Molybdopterin dinucleotide-binding domain M001_020055 IPR009010 Aspartate decarboxylase-like domain superfamily M001_020055 IPR006656 Molybdopterin oxidoreductase M001_020055 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site M001_020055 IPR006311 Twin-arginine translocation pathway, signal sequence M001_020055 IPR041460 Molybdopterin oxidoreductase, N-terminal M001_020055 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain M001_020055 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase M001_020065 IPR038429 PhoQ Sensor superfamily M001_020065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_020065 IPR005467 Histidine kinase domain M001_020065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_020065 IPR015014 PhoQ Sensor M001_020065 IPR003594 Histidine kinase/HSP90-like ATPase M001_020065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_020065 IPR003660 HAMP domain M001_020070 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020070 IPR039420 Transcriptional regulatory protein WalR-like M001_020070 IPR001789 Signal transduction response regulator, receiver domain M001_020070 IPR001867 OmpR/PhoB-type DNA-binding domain M001_020070 IPR011006 CheY-like superfamily M001_020085 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ M001_020085 IPR013130 Ferric reductase transmembrane component-like domain M001_020090 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily M001_020090 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP M001_020090 IPR000572 Oxidoreductase, molybdopterin-binding domain M001_020090 IPR006311 Twin-arginine translocation pathway, signal sequence M001_020095 IPR009476 Protein of unknown function DUF1097 M001_020100 IPR011006 CheY-like superfamily M001_020100 IPR003593 AAA+ ATPase domain M001_020100 IPR009057 Homeobox-like domain superfamily M001_020100 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_020100 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_020100 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_020100 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_020100 IPR025944 Sigma-54 interaction domain, conserved site M001_020100 IPR001789 Signal transduction response regulator, receiver domain M001_020110 IPR005467 Histidine kinase domain M001_020110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_020110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_020110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_020110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_020110 IPR003594 Histidine kinase/HSP90-like ATPase M001_020125 IPR002347 Short-chain dehydrogenase/reductase SDR M001_020125 IPR020904 Short-chain dehydrogenase/reductase, conserved site M001_020125 IPR036291 NAD(P)-binding domain superfamily M001_020130 IPR000644 CBS domain M001_020130 IPR013785 Aldolase-type TIM barrel M001_020130 IPR001093 IMP dehydrogenase/GMP reductase M001_020130 IPR005990 Inosine-5'-monophosphate dehydrogenase M001_020130 IPR015875 IMP dehydrogenase / GMP reductase, conserved site M001_020135 IPR019275 Protein of unknown function DUF2301 M001_020145 IPR019888 Transcription regulator AsnC-type M001_020145 IPR036390 Winged helix DNA-binding domain superfamily M001_020145 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020145 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M001_020145 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M001_020145 IPR011991 ArsR-like helix-turn-helix domain M001_020145 IPR011008 Dimeric alpha-beta barrel M001_020145 IPR000485 AsnC-type HTH domain M001_020150 IPR004618 Aspartate--ammonia ligase M001_020150 IPR006195 Aminoacyl-tRNA synthetase, class II M001_020155 IPR003959 ATPase, AAA-type, core M001_020155 IPR017730 Chaperonin ClpB M001_020155 IPR003593 AAA+ ATPase domain M001_020155 IPR019489 Clp ATPase, C-terminal M001_020155 IPR036628 Clp, N-terminal domain superfamily M001_020155 IPR001270 ClpA/B family M001_020155 IPR004176 Clp, N-terminal M001_020155 IPR018368 ClpA/B, conserved site 1 M001_020155 IPR028299 ClpA/B, conserved site 2 M001_020155 IPR041546 ClpA/ClpB, AAA lid domain M001_020155 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_020165 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M001_020165 IPR036986 RNA-binding S4 domain superfamily M001_020165 IPR006225 Pseudouridine synthase, RluC/RluD M001_020165 IPR020103 Pseudouridine synthase, catalytic domain superfamily M001_020165 IPR006145 Pseudouridine synthase, RsuA/RluA M001_020165 IPR002942 RNA-binding S4 domain M001_020170 IPR017689 Outer membrane protein assembly factor BamD M001_020170 IPR039565 Outer membrane lipoprotein BamD-like M001_020170 IPR011990 Tetratricopeptide-like helical domain superfamily M001_020175 IPR023753 FAD/NAD(P)-binding domain M001_020175 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_020175 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M001_020175 IPR036188 FAD/NAD(P)-binding domain superfamily M001_020180 IPR036458 Sodium:dicarboxylate symporter superfamily M001_020180 IPR001991 Sodium:dicarboxylate symporter M001_020185 IPR021144 Uncharacterised protein family UPF0597 M001_020185 IPR005130 Serine dehydratase-like, alpha subunit M001_020190 IPR039446 Transcriptional regulator DauR-like M001_020190 IPR039445 Transcriptional regulator DauR-like, HTH domain M001_020190 IPR013559 YheO-like M001_020200 IPR034300 NADP transhydrogenase beta-like domain M001_020200 IPR012136 NADP transhydrogenase, beta subunit M001_020200 IPR029035 DHS-like NAD/FAD-binding domain superfamily M001_020205 IPR026255 NAD(P) transhydrogenase, alpha subunit M001_020205 IPR036291 NAD(P)-binding domain superfamily M001_020205 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal M001_020205 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 M001_020205 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 M001_020205 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M001_020205 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M001_020210 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M001_020210 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M001_020215 IPR009057 Homeobox-like domain superfamily M001_020215 IPR009594 Transcription regulator HTH, AraC, N-terminal M001_020215 IPR018060 DNA binding HTH domain, AraC-type M001_020220 IPR002446 Lipocalin, bacterial M001_020220 IPR022272 Lipocalin family conserved site M001_020220 IPR000566 Lipocalin/cytosolic fatty-acid binding domain M001_020220 IPR012674 Calycin M001_020220 IPR022271 Lipocalin, ApoD type M001_020225 IPR003660 HAMP domain M001_020225 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_020225 IPR004090 Chemotaxis methyl-accepting receptor M001_020225 IPR029151 Periplasmic sensor-like domain superfamily M001_020225 IPR000727 Target SNARE coiled-coil homology domain M001_020225 IPR033479 Double Cache domain 1 M001_020235 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020235 IPR000847 Transcription regulator HTH, LysR M001_020235 IPR005119 LysR, substrate-binding M001_020235 IPR036390 Winged helix DNA-binding domain superfamily M001_020255 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M001_020255 IPR002082 Aspartate carbamoyltransferase M001_020255 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M001_020255 IPR006130 Aspartate/ornithine carbamoyltransferase M001_020255 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M001_020260 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal M001_020260 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal M001_020260 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily M001_020260 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily M001_020260 IPR002801 Aspartate transcarbamylase regulatory subunit M001_020265 IPR036390 Winged helix DNA-binding domain superfamily M001_020265 IPR001669 Arginine repressor M001_020265 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020265 IPR036251 Arginine repressor, C-terminal domain superfamily M001_020265 IPR020900 Arginine repressor, DNA-binding domain M001_020265 IPR020899 Arginine repressor, C-terminal M001_020270 IPR018385 C4-dicarboxylate anaerobic carrier-like M001_020275 IPR006130 Aspartate/ornithine carbamoyltransferase M001_020275 IPR002292 Ornithine/putrescine carbamoyltransferase M001_020275 IPR024904 Ornithine carbamoyltransferase M001_020275 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M001_020275 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M001_020275 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M001_020280 IPR003964 Carbamate kinase M001_020280 IPR001048 Aspartate/glutamate/uridylate kinase M001_020280 IPR036393 Acetylglutamate kinase-like superfamily M001_020285 IPR003876 Arginine deiminase M001_020305 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN M001_020305 IPR034505 Anaerobic coproporphyrinogen-III oxidase M001_020305 IPR006638 Elp3/MiaB/NifB M001_020305 IPR010723 HemN, C-terminal M001_020305 IPR023404 Radical SAM, alpha/beta horseshoe M001_020305 IPR007197 Radical SAM M001_020310 IPR019617 Domain of unknown function DUF2489 M001_020315 IPR007336 Der GTPase activator M001_020320 IPR009056 Cytochrome c-like domain M001_020320 IPR036909 Cytochrome c-like domain superfamily M001_020320 IPR024167 Cytochrome c4-like M001_020325 IPR006073 GTP binding domain M001_020325 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC M001_020325 IPR030393 EngB-type guanine nucleotide-binding (G) domain M001_020325 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_020335 IPR036291 NAD(P)-binding domain superfamily M001_020335 IPR041121 SDH, C-terminal M001_020335 IPR011342 Shikimate dehydrogenase M001_020335 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal M001_020335 IPR022893 Shikimate dehydrogenase family M001_020335 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase M001_020340 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily M001_020340 IPR018375 Coproporphyrinogen III oxidase, conserved site M001_020340 IPR001260 Coproporphyrinogen III oxidase, aerobic M001_020345 IPR006070 YrdC-like domain M001_020345 IPR023535 Threonylcarbamoyl-AMP synthase M001_020345 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M001_020350 IPR033747 Class I PurE M001_020350 IPR000031 PurE domain M001_020350 IPR024694 PurE, prokaryotic type M001_020350 IPR035893 PurE domain superfamily M001_020355 IPR000380 DNA topoisomerase, type IA M001_020355 IPR013498 DNA topoisomerase, type IA, zn finger M001_020360 IPR007456 Smg M001_020365 IPR003488 DNA recombination-mediator protein A M001_020365 IPR041614 DprA, winged helix domain M001_020365 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020370 IPR036779 LysM domain superfamily M001_020370 IPR018392 LysM domain M001_020375 IPR036821 Peptide deformylase superfamily M001_020375 IPR023635 Peptide deformylase M001_020380 IPR005793 Formyl transferase, C-terminal M001_020380 IPR037022 Formyl transferase, C-terminal domain superfamily M001_020380 IPR002376 Formyl transferase, N-terminal M001_020380 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain M001_020380 IPR001555 Phosphoribosylglycinamide formyltransferase, active site M001_020380 IPR005794 Methionyl-tRNA formyltransferase M001_020380 IPR011034 Formyl transferase-like, C-terminal domain superfamily M001_020380 IPR036477 Formyl transferase, N-terminal domain superfamily M001_020385 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type M001_020385 IPR023267 RNA (C5-cytosine) methyltransferase M001_020385 IPR006027 NusB/RsmB/TIM44 M001_020385 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site M001_020385 IPR035926 NusB-like superfamily M001_020385 IPR004573 rRNA small subunit methyltransferase B M001_020385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_020390 IPR006037 Regulator of K+ conductance, C-terminal M001_020390 IPR036291 NAD(P)-binding domain superfamily M001_020390 IPR006036 Potassium uptake protein TrkA M001_020390 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M001_020390 IPR003148 Regulator of K+ conductance, N-terminal M001_020395 IPR004772 TrkH potassium transport family M001_020395 IPR003445 Cation transporter M001_020405 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain M001_020405 IPR008146 Glutamine synthetase, catalytic domain M001_020405 IPR027303 Glutamine synthetase, glycine-rich site M001_020405 IPR004809 Glutamine synthetase type I M001_020405 IPR001637 Glutamine synthetase class-I, adenylation site M001_020405 IPR027302 Glutamine synthetase, N-terminal conserved site M001_020405 IPR036651 Glutamine synthetase, N-terminal domain superfamily M001_020405 IPR008147 Glutamine synthetase, beta-Grasp domain M001_020415 IPR003594 Histidine kinase/HSP90-like ATPase M001_020415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_020415 IPR005467 Histidine kinase domain M001_020415 IPR035965 PAS domain superfamily M001_020415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_020415 IPR013767 PAS fold M001_020415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_020415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_020415 IPR000014 PAS domain M001_020420 IPR003593 AAA+ ATPase domain M001_020420 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M001_020420 IPR001789 Signal transduction response regulator, receiver domain M001_020420 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_020420 IPR010114 DNA-binding transcriptional regulator NtrC M001_020420 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M001_020420 IPR002197 DNA binding HTH domain, Fis-type M001_020420 IPR009057 Homeobox-like domain superfamily M001_020420 IPR011006 CheY-like superfamily M001_020420 IPR025944 Sigma-54 interaction domain, conserved site M001_020420 IPR002078 RNA polymerase sigma factor 54 interaction domain M001_020425 IPR032466 Metal-dependent hydrolase M001_020425 IPR006330 Adenosine/adenine deaminase M001_020425 IPR028893 Adenosine deaminase M001_020425 IPR001365 Adenosine/AMP deaminase domain M001_020430 IPR003798 DNA recombination RmuC M001_020445 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020445 IPR023761 Transcriptional repressor HTH, NsrR M001_020445 IPR036390 Winged helix DNA-binding domain superfamily M001_020445 IPR030489 Transcription regulator Rrf2-type, conserved site M001_020445 IPR000944 Transcription regulator Rrf2-type M001_020450 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M001_020450 IPR029056 Ribokinase-like M001_020450 IPR011611 Carbohydrate kinase PfkB M001_020450 IPR002139 Ribokinase/fructokinase M001_020455 IPR005119 LysR, substrate-binding M001_020455 IPR000847 Transcription regulator HTH, LysR M001_020455 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020455 IPR036390 Winged helix DNA-binding domain superfamily M001_020460 IPR029062 Class I glutamine amidotransferase-like M001_020460 IPR017926 Glutamine amidotransferase M001_020460 IPR001674 GMP synthase, C-terminal M001_020460 IPR025777 GMP synthetase ATP pyrophosphatase domain M001_020460 IPR004739 GMP synthase, glutamine amidotransferase M001_020460 IPR022955 GMP synthase M001_020460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_020460 IPR022310 NAD/GMP synthase M001_020465 IPR010061 Methylmalonate-semialdehyde dehydrogenase M001_020465 IPR015590 Aldehyde dehydrogenase domain M001_020465 IPR016162 Aldehyde dehydrogenase, N-terminal M001_020465 IPR016160 Aldehyde dehydrogenase, cysteine active site M001_020465 IPR016163 Aldehyde dehydrogenase, C-terminal M001_020465 IPR016161 Aldehyde/histidinol dehydrogenase M001_020470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M001_020470 IPR015424 Pyridoxal phosphate-dependent transferase M001_020470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M001_020470 IPR005814 Aminotransferase class-III M001_020475 IPR014710 RmlC-like jelly roll fold M001_020475 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_020475 IPR001387 Cro/C1-type helix-turn-helix domain M001_020475 IPR011051 RmlC-like cupin domain superfamily M001_020475 IPR013096 Cupin 2, conserved barrel M001_020480 IPR016160 Aldehyde dehydrogenase, cysteine active site M001_020480 IPR016161 Aldehyde/histidinol dehydrogenase M001_020480 IPR015590 Aldehyde dehydrogenase domain M001_020480 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M001_020480 IPR016162 Aldehyde dehydrogenase, N-terminal M001_020480 IPR016163 Aldehyde dehydrogenase, C-terminal M001_020490 IPR000620 EamA domain M001_020490 IPR004626 RarD protein M001_020495 IPR004090 Chemotaxis methyl-accepting receptor M001_020495 IPR003660 HAMP domain M001_020495 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_020500 IPR007272 Sulphur transport domain M001_020505 IPR000498 Outer membrane protein OmpA-like, transmembrane domain M001_020505 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M001_020505 IPR002368 Outer membrane protein, OmpA M001_020505 IPR036737 OmpA-like domain superfamily M001_020505 IPR006690 Outer membrane protein, OmpA-like, conserved site M001_020505 IPR006665 OmpA-like domain M001_020505 IPR006664 Outer membrane protein, bacterial M001_020510 IPR001721 Threonine dehydratase, ACT-like domain M001_020510 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site M001_020510 IPR005787 Threonine dehydratase, biosynthetic M001_020510 IPR001926 Pyridoxal-phosphate dependent enzyme M001_020510 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M001_020510 IPR038110 Threonine dehydratase, ACT-like domain superfamily M001_020515 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase M001_020515 IPR037237 IlvD/EDD, N-terminal domain M001_020515 IPR004404 Dihydroxy-acid dehydratase M001_020515 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site M001_020515 IPR042096 Dihydroxy-acid dehydratase, C-terminal M001_020520 IPR001544 Aminotransferase class IV M001_020520 IPR018300 Aminotransferase, class IV, conserved site M001_020520 IPR036038 Aminotransferase-like, PLP-dependent enzymes M001_020520 IPR005785 Branched-chain amino acid aminotransferase I M001_020520 IPR033939 Branched-chain aminotransferase M001_020525 IPR002912 ACT domain M001_020530 IPR012000 Thiamine pyrophosphate enzyme, central domain M001_020530 IPR029061 Thiamin diphosphate-binding fold M001_020530 IPR000399 TPP-binding enzyme, conserved site M001_020530 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M001_020530 IPR029035 DHS-like NAD/FAD-binding domain superfamily M001_020530 IPR039368 Acetolactate synthase large subunit, TPP binding domain M001_020530 IPR012846 Acetolactate synthase, large subunit, biosynthetic M001_020530 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M001_020535 IPR020568 Ribosomal protein S5 domain 2-type fold M001_020535 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_020535 IPR004482 Mg chelatase-related protein M001_020535 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_020535 IPR003593 AAA+ ATPase domain M001_020535 IPR000523 Magnesium chelatase ChlI domain M001_020535 IPR025158 Mg chelatase-related protein, C-terminal domain M001_020535 IPR001208 MCM domain M001_020540 IPR002123 Phospholipid/glycerol acyltransferase M001_020545 IPR002123 Phospholipid/glycerol acyltransferase M001_020550 IPR007553 Domain of unknown function DUF523 M001_020560 IPR000868 Isochorismatase-like M001_020560 IPR036380 Isochorismatase-like superfamily M001_020565 IPR006406 Nicotinate phosphoribosyltransferase M001_020565 IPR007229 Nicotinate phosphoribosyltransferase family M001_020565 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal M001_020565 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain M001_020565 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase M001_020570 IPR036249 Thioredoxin-like superfamily M001_020570 IPR001853 DSBA-like thioredoxin domain M001_020570 IPR013766 Thioredoxin domain M001_020570 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL M001_020575 IPR011009 Protein kinase-like domain superfamily M001_020575 IPR032882 SrkA/RdoA protein kinase M001_020575 IPR002575 Aminoglycoside phosphotransferase M001_020580 IPR013783 Immunoglobulin-like fold M001_020580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M001_020580 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M001_020580 IPR032879 FixG, C-terminal immunoglobulin-like domain M001_020580 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG M001_020585 IPR038134 YihD-like superfamily M001_020585 IPR009383 Protein of unknown function DUF1040 M001_020590 IPR029787 Nucleotide cyclase M001_020590 IPR000160 GGDEF domain M001_020590 IPR016132 Phytochrome chromophore attachment domain M001_020590 IPR001294 Phytochrome M001_020590 IPR013515 Phytochrome, central region M001_020590 IPR029016 GAF-like domain superfamily M001_020590 IPR001633 EAL domain M001_020590 IPR003018 GAF domain M001_020590 IPR035919 EAL domain superfamily M001_020595 IPR011789 Cu(I)-responsive transcriptional regulator M001_020595 IPR000551 MerR-type HTH domain M001_020595 IPR009061 Putative DNA-binding domain superfamily M001_020600 IPR006122 Heavy metal-associated domain, copper ion-binding M001_020600 IPR017969 Heavy-metal-associated, conserved site M001_020600 IPR006121 Heavy metal-associated domain, HMA M001_020600 IPR023214 HAD superfamily M001_020600 IPR001757 P-type ATPase M001_020600 IPR036412 HAD-like superfamily M001_020600 IPR027256 P-type ATPase, subfamily IB M001_020600 IPR036163 Heavy metal-associated domain superfamily M001_020600 IPR008250 P-type ATPase, A domain superfamily M001_020600 IPR023298 P-type ATPase, transmembrane domain superfamily M001_020600 IPR018303 P-type ATPase, phosphorylation site M001_020600 IPR023299 P-type ATPase, cytoplasmic domain N M001_020605 IPR023031 Orotate phosphoribosyltransferase M001_020605 IPR000836 Phosphoribosyltransferase domain M001_020605 IPR004467 Orotate phosphoribosyl transferase domain M001_020605 IPR029057 Phosphoribosyltransferase-like M001_020610 IPR036345 Exoribonuclease, PH domain 2 superfamily M001_020610 IPR018336 Ribonuclease PH, conserved site M001_020610 IPR015847 Exoribonuclease, phosphorolytic domain 2 M001_020610 IPR027408 PNPase/RNase PH domain superfamily M001_020610 IPR001247 Exoribonuclease, phosphorolytic domain 1 M001_020610 IPR002381 Ribonuclease PH, bacterial-type M001_020610 IPR020568 Ribosomal protein S5 domain 2-type fold M001_020615 IPR013551 Domain of unknown function DUF1732 M001_020615 IPR005229 Conserved hypothetical protein CHP00255 M001_020615 IPR013527 YicC-like, N-terminal M001_020655 IPR000055 Restriction endonuclease, type I, HsdS M001_020660 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain M001_020660 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M001_020660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M001_020660 IPR003356 DNA methylase, adenine-specific M001_020660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_020665 IPR013670 EcoEI R protein C-terminal domain M001_020665 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_020665 IPR029464 Type I restriction enzyme R protein, N-terminal domain M001_020665 IPR001650 Helicase, C-terminal M001_020665 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_020665 IPR006935 Helicase/UvrB, N-terminal M001_020685 IPR011006 CheY-like superfamily M001_020685 IPR000792 Transcription regulator LuxR, C-terminal M001_020685 IPR001789 Signal transduction response regulator, receiver domain M001_020685 IPR016032 Signal transduction response regulator, C-terminal effector M001_020685 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020690 IPR001789 Signal transduction response regulator, receiver domain M001_020690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_020690 IPR036641 HPT domain superfamily M001_020690 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M001_020690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_020690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_020690 IPR005467 Histidine kinase domain M001_020690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_020690 IPR019247 Histidine kinase BarA, N-terminal M001_020690 IPR003660 HAMP domain M001_020690 IPR003594 Histidine kinase/HSP90-like ATPase M001_020690 IPR011006 CheY-like superfamily M001_020695 IPR023346 Lysozyme-like domain superfamily M001_020695 IPR011055 Duplicated hybrid motif M001_020695 IPR016047 Peptidase M23 M001_020695 IPR010090 Phage tail tape measure protein M001_020695 IPR000189 Prokaryotic transglycosylase, active site M001_020695 IPR008258 Transglycosylase SLT domain 1 M001_020700 IPR029025 Type III secretion system substrate exporter, C-terminal M001_020700 IPR006135 Type III secretion system substrate exporter M001_020700 IPR006307 Type III exporter system, secretion apparatus protein BsaZ M001_020705 IPR002010 Type III secretion system inner membrane R protein M001_020705 IPR006304 Type III secretion protein SpaR/YscT M001_020715 IPR005838 Type III secretion system inner membrane P protein M001_020715 IPR005773 Yop virulence translocation protein R M001_020740 IPR025505 FHIPEP conserved site M001_020740 IPR042196 FHIPEP, domain 4 M001_020740 IPR001712 Type III secretion system FHIPEP M001_020740 IPR006302 Type III secretion protein HrcV M001_020740 IPR042193 FHIPEP, domain 3 M001_020745 IPR003593 AAA+ ATPase domain M001_020745 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M001_020745 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M001_020745 IPR040627 T3SS EscN ATPase, C-terminal M001_020745 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_020745 IPR013380 ATPase, type III secretion system, H+-transporting M001_020745 IPR005714 ATPase, type III secretion system, FliI/YscN M001_020745 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M001_020785 IPR006972 Secretion system effector C, SseC-like M001_020830 IPR005644 NolW-like M001_020830 IPR038591 NolW-like superfamily M001_020830 IPR004846 Type II/III secretion system M001_020830 IPR004845 Type II secretion system GspD, conserved site M001_020830 IPR003522 Type III secretion system outer membrane pore YscC/HrcC M001_020845 IPR018060 DNA binding HTH domain, AraC-type M001_020845 IPR018062 HTH domain AraC-type, conserved site M001_020845 IPR020449 Transcription regulator HTH, AraC- type M001_020845 IPR002818 DJ-1/PfpI M001_020845 IPR009057 Homeobox-like domain superfamily M001_020845 IPR029062 Class I glutamine amidotransferase-like M001_020865 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ M001_020865 IPR006182 Secretory protein YscJ/FliF M001_020880 IPR010812 Hypersensitivity response secretion-like, HrpJ M001_020880 IPR013351 Type III secretion system effector delivery regulator TyeA-related M001_020885 IPR036388 Winged helix-like DNA-binding domain superfamily M001_020885 IPR036390 Winged helix DNA-binding domain superfamily M001_020885 IPR005119 LysR, substrate-binding M001_020885 IPR000847 Transcription regulator HTH, LysR M001_020890 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site M001_020890 IPR013154 Alcohol dehydrogenase, N-terminal M001_020890 IPR011032 GroES-like superfamily M001_020890 IPR036291 NAD(P)-binding domain superfamily M001_020890 IPR013149 Alcohol dehydrogenase, C-terminal M001_020890 IPR020843 Polyketide synthase, enoylreductase domain M001_020890 IPR014183 Alcohol dehydrogenase class III M001_020895 IPR000801 Putative esterase M001_020895 IPR014186 S-formylglutathione hydrolase M001_020895 IPR029058 Alpha/Beta hydrolase fold M001_020905 IPR042095 Sulfatase-modifying factor enzyme superfamily M001_020905 IPR034660 DinB/YfiT-like putative metalloenzymes M001_020905 IPR005532 Sulfatase-modifying factor enzyme M001_020905 IPR032890 Hercynine oxygenase, Actinobacteria M001_020905 IPR016187 C-type lectin fold M001_020905 IPR024775 DinB-like domain M001_020905 IPR017806 Ergothioneine biosynthesis protein EgtB M001_020910 IPR038770 Sodium/solute symporter superfamily M001_020910 IPR016833 Putative sodium bile acid cotransporter M001_020915 IPR002293 Amino acid/polyamine transporter I M001_020920 IPR012340 Nucleic acid-binding, OB-fold M001_020920 IPR002547 tRNA-binding domain M001_020925 IPR002293 Amino acid/polyamine transporter I M001_020930 IPR004375 YhcH/YjgK/YiaL family M001_020930 IPR037012 YhcH/YjgK/YiaL superfamily M001_020935 IPR006101 Glycoside hydrolase, family 2 M001_020935 IPR023232 Glycoside hydrolase, family 2, active site M001_020935 IPR006103 Glycoside hydrolase family 2, catalytic domain M001_020935 IPR008979 Galactose-binding-like domain superfamily M001_020935 IPR032312 Beta-galactosidase, domain 4 M001_020935 IPR013783 Immunoglobulin-like fold M001_020935 IPR017853 Glycoside hydrolase superfamily M001_020935 IPR006104 Glycosyl hydrolases family 2, sugar binding domain M001_020935 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich M001_020935 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase M001_020935 IPR023230 Glycoside hydrolase, family 2, conserved site M001_020935 IPR011013 Galactose mutarotase-like domain superfamily M001_020935 IPR014718 Glycoside hydrolase-type carbohydrate-binding M001_020935 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M001_020935 IPR004199 Beta galactosidase small chain/ domain 5 M001_020940 IPR028082 Periplasmic binding protein-like I M001_020940 IPR000843 LacI-type HTH domain M001_020940 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_020975 IPR011004 Trimeric LpxA-like superfamily M001_020975 IPR001451 Hexapeptide repeat M001_020980 IPR001098 DNA-directed DNA polymerase, family A, palm domain M001_020980 IPR002421 5'-3' exonuclease, N-terminal M001_020980 IPR036397 Ribonuclease H superfamily M001_020980 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal M001_020980 IPR020045 DNA polymerase I-like, H3TH domain M001_020980 IPR012337 Ribonuclease H-like superfamily M001_020980 IPR029060 PIN-like domain superfamily M001_020980 IPR018320 DNA polymerase 1 M001_020980 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M001_020980 IPR002298 DNA polymerase A M001_020980 IPR008918 Helix-hairpin-helix motif, class 2 M001_020980 IPR002562 3'-5' exonuclease domain M001_020980 IPR019760 DNA-directed DNA polymerase, family A, conserved site M001_020985 IPR029062 Class I glutamine amidotransferase-like M001_020985 IPR026041 Glyoxalase ElbB M001_020990 IPR009252 Cell division protein ZapB M001_021000 IPR005881 Serine O-acetyltransferase M001_021000 IPR011004 Trimeric LpxA-like superfamily M001_021000 IPR042122 Serine acetyltransferase, N-terminal domain superfamily M001_021000 IPR010493 Serine acetyltransferase, N-terminal M001_021000 IPR018357 Hexapeptide transferase, conserved site M001_021000 IPR001451 Hexapeptide repeat M001_021005 IPR023783 Cation efflux pump FieF M001_021005 IPR036837 Cation efflux protein, cytoplasmic domain superfamily M001_021005 IPR027469 Cation efflux transmembrane domain superfamily M001_021005 IPR027470 Cation efflux protein, cytoplasmic domain M001_021005 IPR002524 Cation efflux protein M001_021010 IPR011006 CheY-like superfamily M001_021010 IPR001867 OmpR/PhoB-type DNA-binding domain M001_021010 IPR036388 Winged helix-like DNA-binding domain superfamily M001_021010 IPR001789 Signal transduction response regulator, receiver domain M001_021010 IPR039420 Transcriptional regulatory protein WalR-like M001_021015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_021015 IPR005467 Histidine kinase domain M001_021015 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_021015 IPR003594 Histidine kinase/HSP90-like ATPase M001_021015 IPR003660 HAMP domain M001_021015 IPR038515 CpxA, periplasmic domain superfamily M001_021015 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_021015 IPR032404 Two-component sensor protein CpxA, periplasmic domain M001_021015 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_021020 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase M001_021020 IPR029028 Alpha/beta knot methyltransferases M001_021020 IPR001537 tRNA/rRNA methyltransferase, SpoU type M001_021020 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M001_021025 IPR002528 Multi antimicrobial extrusion protein M001_021030 IPR036249 Thioredoxin-like superfamily M001_021030 IPR003782 Copper chaperone SCO1/SenC M001_021040 IPR006199 LexA repressor, DNA-binding domain M001_021040 IPR039418 LexA-like M001_021040 IPR006200 Transcription regulator LexA M001_021040 IPR006197 Peptidase S24, LexA-like M001_021040 IPR015927 Peptidase S24/S26A/S26B/S26C M001_021040 IPR036388 Winged helix-like DNA-binding domain superfamily M001_021040 IPR036286 LexA/Signal peptidase-like superfamily M001_021040 IPR036390 Winged helix DNA-binding domain superfamily M001_021045 IPR041728 GPAT/DHAPAT, acyltransferase domain M001_021045 IPR002123 Phospholipid/glycerol acyltransferase M001_021045 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB M001_021045 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase M001_021050 IPR006370 4-hydroxybenzoate polyprenyltransferase-like M001_021050 IPR039653 Prenyltransferase M001_021050 IPR000537 UbiA prenyltransferase family M001_021050 IPR030470 UbiA prenyltransferase conserved site M001_021055 IPR007440 Chorismate--pyruvate lyase M001_021055 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M001_021075 IPR014188 Acrylyl-CoA reductase AcuI M001_021075 IPR013149 Alcohol dehydrogenase, C-terminal M001_021075 IPR013154 Alcohol dehydrogenase, N-terminal M001_021075 IPR011032 GroES-like superfamily M001_021075 IPR036291 NAD(P)-binding domain superfamily M001_021075 IPR020843 Polyketide synthase, enoylreductase domain M001_021080 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal M001_021080 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily M001_021080 IPR039901 3-deoxy-D-manno-octulosonic acid transferase M001_021085 IPR002201 Glycosyl transferase, family 9 M001_021085 IPR011910 ADP-heptose--LPS heptosyltransferase 2 M001_021090 IPR029044 Nucleotide-diphospho-sugar transferases M001_021090 IPR001173 Glycosyltransferase 2-like M001_021095 IPR002201 Glycosyl transferase, family 9 M001_021100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M001_021100 IPR004821 Cytidyltransferase-like domain M001_021100 IPR001980 Phosphopantetheine adenylyltransferase M001_021105 IPR007488 Protein of unknown function DUF535 M001_021110 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type M001_021110 IPR010663 Zinc finger, FPG/IleRS-type M001_021110 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain M001_021110 IPR020629 Formamidopyrimidine-DNA glycosylase M001_021110 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site M001_021110 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding M001_021110 IPR035937 MutM-like, N-terminal M001_021110 IPR010979 Ribosomal protein S13-like, H2TH M001_021120 IPR001705 Ribosomal protein L33 M001_021120 IPR038584 Ribosomal protein L33 superfamily M001_021120 IPR011332 Zinc-binding ribosomal protein M001_021120 IPR018264 Ribosomal protein L33, conserved site M001_021125 IPR034704 L28p-like M001_021125 IPR026569 Ribosomal protein L28/L24 M001_021125 IPR037147 Ribosomal protein L28/L24 superfamily M001_021125 IPR001383 Ribosomal protein L28 M001_021130 IPR020891 Uncharacterised protein family UPF0758, conserved site M001_021130 IPR010994 RuvA domain 2-like M001_021130 IPR025657 RadC-like JAB domain M001_021130 IPR037518 MPN domain M001_021130 IPR001405 Uncharacterised protein family UPF0758 M001_021135 IPR035929 CoaB-like superfamily M001_021135 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC M001_021135 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal M001_021135 IPR036551 Flavin prenyltransferase-like M001_021135 IPR003382 Flavoprotein M001_021140 IPR029054 dUTPase-like M001_021140 IPR036157 dUTPase-like superfamily M001_021140 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase M001_021140 IPR033704 dUTPase, trimeric M001_021145 IPR001647 DNA-binding HTH domain, TetR-type M001_021145 IPR009057 Homeobox-like domain superfamily M001_021145 IPR023769 Nucleoid occlusion factor SlmA M001_021150 IPR011066 Mechanosensitive ion channel MscS, C-terminal M001_021150 IPR006685 Mechanosensitive ion channel MscS M001_021150 IPR010920 LSM domain superfamily M001_021150 IPR008910 Conserved TM helix M001_021150 IPR023408 Mechanosensitive ion channel MscS domain superfamily M001_021150 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 M001_021150 IPR006686 Mechanosensitive ion channel MscS, conserved site M001_021155 IPR018189 Phosphoglucose isomerase, conserved site M001_021155 IPR001672 Phosphoglucose isomerase (PGI) M001_021155 IPR035482 Phosphoglucose isomerase, SIS domain 2 M001_021155 IPR035476 Phosphoglucose isomerase, SIS domain 1 M001_021155 IPR023096 Phosphoglucose isomerase, C-terminal M001_021160 IPR036291 NAD(P)-binding domain superfamily M001_021160 IPR000506 Ketol-acid reductoisomerase, C-terminal M001_021160 IPR013023 Ketol-acid reductoisomerase M001_021160 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M001_021160 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_021160 IPR013116 Ketol-acid reductoisomerase, N-terminal M001_021165 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain M001_021165 IPR005119 LysR, substrate-binding M001_021165 IPR036390 Winged helix DNA-binding domain superfamily M001_021165 IPR036388 Winged helix-like DNA-binding domain superfamily M001_021165 IPR000847 Transcription regulator HTH, LysR M001_021180 IPR016181 Acyl-CoA N-acyltransferase M001_021180 IPR000182 GNAT domain M001_021180 IPR011761 ATP-grasp fold M001_021180 IPR016102 Succinyl-CoA synthetase-like M001_021180 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain M001_021180 IPR013815 ATP-grasp fold, subdomain 1 M001_021180 IPR003781 CoA-binding M001_021180 IPR036291 NAD(P)-binding domain superfamily M001_021210 IPR008254 Flavodoxin/nitric oxide synthase M001_021210 IPR026816 Flavodoxin domain M001_021210 IPR029039 Flavoprotein-like superfamily M001_021210 IPR001226 Flavodoxin, conserved site M001_021215 IPR004772 TrkH potassium transport family M001_021215 IPR003445 Cation transporter M001_021220 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal M001_021220 IPR020568 Ribosomal protein S5 domain 2-type fold M001_021220 IPR036956 Impact, N-terminal domain superfamily M001_021220 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site M001_021220 IPR035647 EF-G domain III/V-like M001_021220 IPR001498 Impact, N-terminal M001_021220 IPR015796 Impact family, bacterial/archaeal M001_021220 IPR023582 Impact family M001_021225 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site M001_021225 IPR036005 Creatinase/aminopeptidase-like M001_021225 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M001_021225 IPR000994 Peptidase M24 M001_021225 IPR022846 Xaa-Pro dipeptidase M001_021230 IPR020845 AMP-binding, conserved site M001_021230 IPR000873 AMP-dependent synthetase/ligase M001_021230 IPR042099 AMP-dependent synthetase-like superfamily M001_021230 IPR025110 AMP-binding enzyme, C-terminal domain M001_021230 IPR005914 Acetoacetyl-CoA synthase M001_021235 IPR012799 Fatty oxidation complex, alpha subunit FadB M001_021235 IPR001753 Enoyl-CoA hydratase/isomerase M001_021235 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site M001_021235 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding M001_021235 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal M001_021235 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M001_021235 IPR036291 NAD(P)-binding domain superfamily M001_021235 IPR029045 ClpP/crotonase-like domain superfamily M001_021240 IPR016039 Thiolase-like M001_021240 IPR020615 Thiolase, acyl-enzyme intermediate active site M001_021240 IPR020610 Thiolase, active site M001_021240 IPR020617 Thiolase, C-terminal M001_021240 IPR020613 Thiolase, conserved site M001_021240 IPR020616 Thiolase, N-terminal M001_021240 IPR012805 Acetyl-CoA C-acyltransferase FadA M001_021240 IPR002155 Thiolase M001_021245 IPR001867 OmpR/PhoB-type DNA-binding domain M001_021245 IPR039420 Transcriptional regulatory protein WalR-like M001_021245 IPR001789 Signal transduction response regulator, receiver domain M001_021245 IPR036388 Winged helix-like DNA-binding domain superfamily M001_021245 IPR011006 CheY-like superfamily M001_021245 IPR016032 Signal transduction response regulator, C-terminal effector M001_021250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_021250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_021250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_021250 IPR005467 Histidine kinase domain M001_021250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_021250 IPR003660 HAMP domain M001_021250 IPR003594 Histidine kinase/HSP90-like ATPase M001_021255 IPR006059 Bacterial extracellular solute-binding protein M001_021265 IPR036868 TusA-like domain superfamily M001_021265 IPR001455 TusA-like domain M001_021265 IPR022931 Sulfur carrier protein TusA M001_021270 IPR006175 YjgF/YER057c/UK114 family M001_021270 IPR035709 RutC family, YoaB-like M001_021270 IPR035959 RutC-like superfamily M001_021270 IPR019897 RidA, conserved site M001_021275 IPR039567 Glycine zipper domain M001_021275 IPR006664 Outer membrane protein, bacterial M001_021275 IPR006665 OmpA-like domain M001_021275 IPR036737 OmpA-like domain superfamily M001_021275 IPR006690 Outer membrane protein, OmpA-like, conserved site M001_021280 IPR005019 Methyladenine glycosylase M001_021280 IPR011257 DNA glycosylase M001_021280 IPR004597 DNA-3-methyladenine glycosylase I M001_021285 IPR006194 Glycine-tRNA synthetase, heterodimeric M001_021285 IPR002310 Glycine-tRNA ligase, alpha subunit M001_021290 IPR006194 Glycine-tRNA synthetase, heterodimeric M001_021290 IPR015944 Glycine-tRNA ligase, beta subunit M001_021290 IPR008909 DALR anticodon binding M001_021305 IPR005330 MHYT domain M001_021305 IPR029787 Nucleotide cyclase M001_021305 IPR000160 GGDEF domain M001_021305 IPR035919 EAL domain superfamily M001_021305 IPR001633 EAL domain M001_021310 IPR003540 ADP ribosyltransferase M001_021310 IPR003537 Yersinia virulence determinant YopE M001_021310 IPR014773 Virulence factor YopE, GAP domain M001_021310 IPR037168 Virulence factor YopE, GAP domain superfamily M001_021315 IPR014773 Virulence factor YopE, GAP domain M001_021315 IPR037168 Virulence factor YopE, GAP domain superfamily M001_021315 IPR003537 Yersinia virulence determinant YopE M001_021315 IPR003540 ADP ribosyltransferase M001_021320 IPR010261 Tir chaperone protein (CesT) family M001_021320 IPR005416 Type III secretion chaperone SycE M001_021330 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_021330 IPR003660 HAMP domain M001_021330 IPR004090 Chemotaxis methyl-accepting receptor M001_021335 IPR023588 Transcription regulator HTH, PurR M001_021335 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M001_021335 IPR000843 LacI-type HTH domain M001_021335 IPR028082 Periplasmic binding protein-like I M001_021340 IPR000709 Leu/Ile/Val-binding protein M001_021340 IPR028082 Periplasmic binding protein-like I M001_021340 IPR028081 Leucine-binding protein domain M001_021345 IPR001851 ABC transporter, permease M001_021350 IPR001851 ABC transporter, permease M001_021350 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal M001_021355 IPR003593 AAA+ ATPase domain M001_021355 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal M001_021355 IPR017871 ABC transporter, conserved site M001_021355 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021355 IPR003439 ABC transporter-like M001_021360 IPR003439 ABC transporter-like M001_021360 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein M001_021360 IPR017871 ABC transporter, conserved site M001_021360 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021360 IPR003593 AAA+ ATPase domain M001_021365 IPR023695 Thiosulfate sulfurtransferase, bacterial M001_021365 IPR036873 Rhodanese-like domain superfamily M001_021365 IPR001763 Rhodanese-like domain M001_021370 IPR023662 Rhomboid protease GlpG M001_021370 IPR035952 Rhomboid-like superfamily M001_021370 IPR022764 Peptidase S54, rhomboid domain M001_021370 IPR022732 Peptidase S54, GlpG peptidase, N-terminal M001_021370 IPR038236 GlpG peptidase, N-terminal domain superfamily M001_021375 IPR025920 Bacterial virulence factor lipase, N-terminal domain M001_021380 IPR007475 Ubiquinone biosynthesis accessory factor UbiK M001_021385 IPR001633 EAL domain M001_021385 IPR035919 EAL domain superfamily M001_021385 IPR029787 Nucleotide cyclase M001_021385 IPR001610 PAC motif M001_021385 IPR000014 PAS domain M001_021385 IPR000700 PAS-associated, C-terminal M001_021385 IPR035965 PAS domain superfamily M001_021385 IPR013656 PAS fold-4 M001_021385 IPR013655 PAS fold-3 M001_021385 IPR000160 GGDEF domain M001_021390 IPR017927 FAD-binding domain, ferredoxin reductase-type M001_021390 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M001_021390 IPR001433 Oxidoreductase FAD/NAD(P)-binding M001_021390 IPR017938 Riboflavin synthase-like beta-barrel M001_021395 IPR023677 UbiD decarboxylyase, bacteria M001_021395 IPR002830 UbiD decarboxylyase family M001_021405 IPR011129 Cold shock domain M001_021405 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M001_021405 IPR004665 Transcription termination factor Rho M001_021405 IPR011113 Rho termination factor, RNA-binding domain M001_021405 IPR036269 Rho termination factor, N-terminal domain superfamily M001_021405 IPR011112 Rho termination factor, N-terminal M001_021405 IPR041703 Transcription termination factor Rho, ATP binding domain M001_021405 IPR003593 AAA+ ATPase domain M001_021405 IPR012340 Nucleic acid-binding, OB-fold M001_021405 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021410 IPR013766 Thioredoxin domain M001_021410 IPR005746 Thioredoxin M001_021410 IPR036249 Thioredoxin-like superfamily M001_021410 IPR017937 Thioredoxin, conserved site M001_021415 IPR001650 Helicase, C-terminal M001_021415 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_021415 IPR023554 ATP-dependent RNA helicase RhlB type M001_021415 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021415 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M001_021415 IPR014014 RNA helicase, DEAD-box type, Q motif M001_021415 IPR011545 DEAD/DEAH box helicase domain M001_021420 IPR030673 Pyrophosphatase, GppA/Ppx-type M001_021420 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase M001_021420 IPR003695 Ppx/GppA phosphatase M001_021430 IPR007536 Ribosomal RNA small subunit methyltransferase J M001_021430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_021435 IPR029787 Nucleotide cyclase M001_021435 IPR035919 EAL domain superfamily M001_021435 IPR000160 GGDEF domain M001_021435 IPR005330 MHYT domain M001_021435 IPR001633 EAL domain M001_021440 IPR001567 Peptidase M3A/M3B catalytic domain M001_021440 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 M001_021445 IPR001223 Glycoside hydrolase family 18, catalytic domain M001_021445 IPR011583 Chitinase II M001_021445 IPR001579 Glycoside hydrolase, chitinase active site M001_021445 IPR017853 Glycoside hydrolase superfamily M001_021450 IPR014756 Immunoglobulin E-set M001_021450 IPR004302 Cellulose/chitin-binding protein, N-terminal M001_021450 IPR041029 N-acetylglucosamine binding protein A domain 2 M001_021450 IPR020879 N-acetylglucosamine-binding protein A M001_021455 IPR030656 Delta-aminolevulinic acid dehydratase, active site M001_021455 IPR001731 Delta-aminolevulinic acid dehydratase M001_021455 IPR013785 Aldolase-type TIM barrel M001_021460 IPR018228 Deoxyribonuclease, TatD-related, conserved site M001_021460 IPR001130 TatD family M001_021460 IPR032466 Metal-dependent hydrolase M001_021460 IPR024918 3'-5' ssDNA/RNA exonuclease TatD M001_021465 IPR002033 Sec-independent periplasmic protein translocase TatC M001_021465 IPR019820 Sec-independent periplasmic protein translocase, conserved site M001_021470 IPR003369 Sec-independent protein translocase protein TatA/B/E M001_021470 IPR018448 Twin-arginine translocation protein TatB M001_021475 IPR003369 Sec-independent protein translocase protein TatA/B/E M001_021475 IPR006312 Sec-independent protein translocase protein TatA/E M001_021480 IPR004147 UbiB domain M001_021480 IPR010232 Probable protein kinase UbiB M001_021480 IPR011009 Protein kinase-like domain superfamily M001_021485 IPR003033 SCP2 sterol-binding domain M001_021485 IPR038989 Ubiquinone biosynthesis protein UbiJ M001_021485 IPR036527 SCP2 sterol-binding domain superfamily M001_021490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_021490 IPR004033 UbiE/COQ5 methyltransferase M001_021490 IPR023576 UbiE/COQ5 methyltransferase, conserved site M001_021495 IPR003691 Putative fluoride ion transporter CrcB M001_021500 IPR032466 Metal-dependent hydrolase M001_021500 IPR013108 Amidohydrolase 3 M001_021500 IPR011059 Metal-dependent hydrolase, composite domain superfamily M001_021505 IPR001248 Purine-cytosine permease M001_021505 IPR030191 Cytosine permease M001_021505 IPR038271 Purine-cytosine permease superfamily M001_021540 IPR003538 Gram-negative bacterial TonB protein M001_021540 IPR006260 TonB/TolA, C-terminal M001_021540 IPR037682 TonB, C-terminal M001_021545 IPR003400 Biopolymer transport protein ExbD/TolR M001_021550 IPR002898 MotA/TolQ/ExbB proton channel M001_021555 IPR002898 MotA/TolQ/ExbB proton channel M001_021565 IPR000792 Transcription regulator LuxR, C-terminal M001_021565 IPR016032 Signal transduction response regulator, C-terminal effector M001_021565 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain M001_021565 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily M001_021565 IPR036388 Winged helix-like DNA-binding domain superfamily M001_021570 IPR017932 Glutamine amidotransferase type 2 domain M001_021570 IPR035466 GlmS/AgaS, SIS domain 1 M001_021570 IPR035490 GlmS/FrlB, SIS domain 2 M001_021570 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising M001_021570 IPR001347 Sugar isomerase (SIS) M001_021570 IPR029055 Nucleophile aminohydrolases, N-terminal M001_021575 IPR036388 Winged helix-like DNA-binding domain superfamily M001_021575 IPR001034 DeoR-type HTH domain M001_021575 IPR037171 NagB/RpiA transferase-like M001_021575 IPR014036 DeoR C-terminal sensor domain M001_021575 IPR036390 Winged helix DNA-binding domain superfamily M001_021575 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M001_021580 IPR036388 Winged helix-like DNA-binding domain superfamily M001_021580 IPR039420 Transcriptional regulatory protein WalR-like M001_021580 IPR001789 Signal transduction response regulator, receiver domain M001_021580 IPR016032 Signal transduction response regulator, C-terminal effector M001_021580 IPR011006 CheY-like superfamily M001_021580 IPR001867 OmpR/PhoB-type DNA-binding domain M001_021585 IPR003660 HAMP domain M001_021585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M001_021585 IPR029151 Periplasmic sensor-like domain superfamily M001_021585 IPR003594 Histidine kinase/HSP90-like ATPase M001_021585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M001_021585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M001_021585 IPR005467 Histidine kinase domain M001_021585 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M001_021590 IPR012338 Beta-lactamase/transpeptidase-like M001_021590 IPR002137 Beta-lactamase, class-D active site M001_021590 IPR001460 Penicillin-binding protein, transpeptidase M001_021600 IPR010364 Uncharacterised protein family, inner membrane CreD M001_021605 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase M001_021605 IPR029044 Nucleotide-diphospho-sugar transferases M001_021605 IPR025877 MobA-like NTP transferase M001_021605 IPR011004 Trimeric LpxA-like superfamily M001_021605 IPR001451 Hexapeptide repeat M001_021605 IPR038009 GlmU, C-terminal LbH domain M001_021605 IPR018357 Hexapeptide transferase, conserved site M001_021610 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain M001_021610 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily M001_021610 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit M001_021610 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal M001_021610 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal M001_021615 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal M001_021615 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021615 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M001_021615 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M001_021615 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M001_021615 IPR005722 ATP synthase, F1 complex, beta subunit M001_021615 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M001_021615 IPR003593 AAA+ ATPase domain M001_021620 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site M001_021620 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily M001_021620 IPR000131 ATP synthase, F1 complex, gamma subunit M001_021625 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M001_021625 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily M001_021625 IPR000793 ATP synthase, alpha subunit, C-terminal M001_021625 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M001_021625 IPR005294 ATP synthase, F1 complex, alpha subunit M001_021625 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M001_021625 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021625 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M001_021625 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M001_021625 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain M001_021630 IPR000711 ATPase, OSCP/delta subunit M001_021630 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily M001_021630 IPR020781 ATPase, OSCP/delta subunit, conserved site M001_021635 IPR005864 ATP synthase, F0 complex, subunit b, bacterial M001_021635 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily M001_021635 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast M001_021640 IPR035921 F/V-ATP synthase subunit C superfamily M001_021640 IPR002379 V-ATPase proteolipid subunit C-like domain M001_021640 IPR038662 F1F0 ATP synthase subunit C superfamily M001_021640 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast M001_021640 IPR000454 ATP synthase, F0 complex, subunit C M001_021640 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site M001_021645 IPR035908 ATP synthase, F0 complex, subunit A superfamily M001_021645 IPR023011 ATP synthase, F0 complex, subunit A, active site M001_021645 IPR000568 ATP synthase, F0 complex, subunit A M001_021655 IPR041468 ParB/Spo0J, HTH domain M001_021655 IPR036086 ParB/Sulfiredoxin superfamily M001_021655 IPR003115 ParB/Sulfiredoxin M001_021655 IPR004437 ParB/RepB/Spo0J partition protein M001_021660 IPR025669 AAA domain M001_021660 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021665 IPR003682 rRNA small subunit methyltransferase G M001_021665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M001_021670 IPR026904 GidA associated domain 3 M001_021670 IPR036188 FAD/NAD(P)-binding domain superfamily M001_021670 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG M001_021670 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related M001_021670 IPR020595 MnmG-related, conserved site M001_021675 IPR029039 Flavoprotein-like superfamily M001_021675 IPR008254 Flavodoxin/nitric oxide synthase M001_021680 IPR012910 TonB-dependent receptor, plug domain M001_021680 IPR037066 TonB-dependent receptor, plug domain superfamily M001_021680 IPR039423 TonB-dependent receptor-like M001_021680 IPR000531 TonB-dependent receptor-like, beta-barrel M001_021680 IPR010105 TonB-dependent siderophore receptor M001_021680 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M001_021685 IPR036640 ABC transporter type 1, transmembrane domain superfamily M001_021685 IPR003439 ABC transporter-like M001_021685 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021685 IPR003593 AAA+ ATPase domain M001_021685 IPR005898 Cyclic peptide transporter M001_021685 IPR017871 ABC transporter, conserved site M001_021685 IPR011527 ABC transporter type 1, transmembrane domain M001_021690 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021690 IPR017871 ABC transporter, conserved site M001_021690 IPR003439 ABC transporter-like M001_021690 IPR003593 AAA+ ATPase domain M001_021695 IPR002491 ABC transporter periplasmic binding domain M001_021700 IPR000522 ABC transporter, permease protein, BtuC-like M001_021700 IPR037294 ABC transporter, BtuC-like M001_021705 IPR005225 Small GTP-binding protein domain M001_021705 IPR004520 tRNA modification GTPase MnmE M001_021705 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 M001_021705 IPR018948 GTP-binding protein TrmE, N-terminal M001_021705 IPR031168 TrmE-type guanine nucleotide-binding domain M001_021705 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021705 IPR006073 GTP binding domain M001_021705 IPR025867 MnmE, helical domain M001_021705 IPR027368 tRNA modification GTPase MnmE domain 2 M001_021710 IPR038210 Membrane insertase YidC, periplasmic domain M001_021710 IPR038221 YidC, periplasmic domain superfamily M001_021710 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 M001_021710 IPR019998 Membrane insertase YidC M001_021710 IPR028055 Membrane insertase YidC/Oxa1, C-terminal M001_021710 IPR028053 Membrane insertase YidC, N-terminal M001_021715 IPR002696 Putative membrane protein insertion efficiency factor M001_021720 IPR020568 Ribosomal protein S5 domain 2-type fold M001_021720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M001_021720 IPR000100 Ribonuclease P M001_021720 IPR020539 Ribonuclease P, conserved site M001_021725 IPR000271 Ribosomal protein L34 M001_021725 IPR020939 Ribosomal protein L34, conserved site M001_021735 IPR035906 MetI-like superfamily M001_021735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M001_021735 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M001_021740 IPR018313 Solute-binding protein family 3, conserved site M001_021740 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M001_021740 IPR001320 Ionotropic glutamate receptor M001_021790 IPR000330 SNF2-related, N-terminal domain M001_021790 IPR038718 SNF2-like, N-terminal domain superfamily M001_021790 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021790 IPR001650 Helicase, C-terminal M001_021790 IPR014001 Helicase superfamily 1/2, ATP-binding domain M001_021790 IPR007527 Zinc finger, SWIM-type M001_021875 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA M001_021875 IPR001907 ATP-dependent Clp protease proteolytic subunit M001_021875 IPR029045 ClpP/crotonase-like domain superfamily M001_021915 IPR013491 Caudovirus, tape measure, N-terminal M001_021980 IPR040873 SopB, HTH domain M001_021980 IPR003115 ParB/Sulfiredoxin M001_021980 IPR036086 ParB/Sulfiredoxin superfamily M001_021980 IPR004437 ParB/RepB/Spo0J partition protein M001_021990 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_021990 IPR025669 AAA domain M001_022025 IPR036388 Winged helix-like DNA-binding domain superfamily M001_022025 IPR027417 P-loop containing nucleoside triphosphate hydrolase M001_022025 IPR018541 FtsK gamma domain M001_022025 IPR002543 FtsK domain M001_022025 IPR041027 FtsK alpha domain M001_022025 IPR025199 DNA translocase FtsK, 4TM region M001_022025 IPR036390 Winged helix DNA-binding domain superfamily