locus-tag class description HXV88_00005 PF11638 DnaA N-terminal domain HXV88_00005 PF08299 Bacterial dnaA protein helix-turn-helix HXV88_00005 PF00308 Bacterial dnaA protein HXV88_00010 PF02767 DNA polymerase III beta subunit, central domain HXV88_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HXV88_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HXV88_00015 PF02463 RecF/RecN/SMC N terminal domain HXV88_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HXV88_00020 PF18053 DNA gyrase B subunit insert domain HXV88_00020 PF00204 DNA gyrase B HXV88_00020 PF01751 Toprim domain HXV88_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_00025 PF12833 Helix-turn-helix domain HXV88_00025 PF01965 DJ-1/PfpI family HXV88_00030 PF12706 Beta-lactamase superfamily domain HXV88_00035 PF00011 Hsp20/alpha crystallin family HXV88_00040 PF00011 Hsp20/alpha crystallin family HXV88_00045 PF00155 Aminotransferase class I and II HXV88_00060 PF07690 Major Facilitator Superfamily HXV88_00065 PF00072 Response regulator receiver domain HXV88_00065 PF00486 Transcriptional regulatory protein, C terminal HXV88_00070 PF13492 GAF domain HXV88_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain HXV88_00070 PF00512 His Kinase A (phospho-acceptor) domain HXV88_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_00070 PF13493 Domain of unknown function (DUF4118) HXV88_00075 PF02669 K+-transporting ATPase, c chain HXV88_00085 PF03814 Potassium-transporting ATPase A subunit HXV88_00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HXV88_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_00095 PF00512 His Kinase A (phospho-acceptor) domain HXV88_00100 PF00873 AcrB/AcrD/AcrF family HXV88_00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_00110 PF00440 Bacterial regulatory proteins, tetR family HXV88_00145 PF12146 Serine aminopeptidase, S33 HXV88_00150 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_00155 PF12105 SpoU, rRNA methylase, C-terminal HXV88_00155 PF00588 SpoU rRNA Methylase family HXV88_00160 PF02824 TGS domain HXV88_00160 PF13291 ACT domain HXV88_00160 PF04607 Region found in RelA / SpoT proteins HXV88_00165 PF01192 RNA polymerase Rpb6 HXV88_00170 PF00625 Guanylate kinase HXV88_00175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HXV88_00190 PF00892 EamA-like transporter family HXV88_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_00210 PF03466 LysR substrate binding domain HXV88_00215 PF00579 tRNA synthetases class I (W and Y) HXV88_00220 PF00582 Universal stress protein family HXV88_00225 PF12241 Trans-2-enoyl-CoA reductase catalytic region HXV88_00225 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HXV88_00225 PF07055 Enoyl reductase FAD binding domain HXV88_00230 PF00210 Ferritin-like domain HXV88_00240 PF06580 Histidine kinase HXV88_00240 PF07694 5TMR of 5TMR-LYT HXV88_00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_00245 PF04397 LytTr DNA-binding domain HXV88_00245 PF00072 Response regulator receiver domain HXV88_00250 PF07690 Major Facilitator Superfamily HXV88_00255 PF02222 ATP-grasp domain HXV88_00255 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HXV88_00260 PF00731 AIR carboxylase HXV88_00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_00275 PF03466 LysR substrate binding domain HXV88_00280 PF07715 TonB-dependent Receptor Plug Domain HXV88_00280 PF00593 TonB dependent receptor HXV88_00285 PF01177 Asp/Glu/Hydantoin racemase HXV88_00315 PF00899 ThiF family HXV88_00320 PF02657 Fe-S metabolism associated domain HXV88_00325 PF00266 Aminotransferase class-V HXV88_00330 PF00580 UvrD/REP helicase N-terminal domain HXV88_00330 PF13361 UvrD-like helicase C-terminal domain HXV88_00335 PF00563 EAL domain HXV88_00335 PF00990 Diguanylate cyclase, GGDEF domain HXV88_00335 PF03707 Bacterial signalling protein N terminal repeat HXV88_00340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HXV88_00345 PF08240 Alcohol dehydrogenase GroES-like domain HXV88_00345 PF00107 Zinc-binding dehydrogenase HXV88_00350 PF00155 Aminotransferase class I and II HXV88_00355 PF08360 QacR-like protein, C-terminal region HXV88_00355 PF00440 Bacterial regulatory proteins, tetR family HXV88_00360 PF01370 NAD dependent epimerase/dehydratase family HXV88_00380 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HXV88_00410 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HXV88_00410 PF12833 Helix-turn-helix domain HXV88_00415 PF01810 LysE type translocator HXV88_00440 PF14001 YdfZ protein HXV88_00460 PF00580 UvrD/REP helicase N-terminal domain HXV88_00460 PF13361 UvrD-like helicase C-terminal domain HXV88_00485 PF01769 Divalent cation transporter HXV88_00485 PF03448 MgtE intracellular N domain HXV88_00485 PF00571 CBS domain HXV88_00490 PF10414 Sirohaem synthase dimerisation region HXV88_00490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HXV88_00490 PF14824 Sirohaem biosynthesis protein central HXV88_00495 PF01226 Formate/nitrite transporter HXV88_00500 PF13806 Rieske-like [2Fe-2S] domain HXV88_00505 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_00505 PF04324 BFD-like [2Fe-2S] binding domain HXV88_00505 PF18267 Rubredoxin NAD+ reductase C-terminal domain HXV88_00505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HXV88_00505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HXV88_00520 PF00005 ABC transporter HXV88_00525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_00535 PF07724 AAA domain (Cdc48 subfamily) HXV88_00535 PF10431 C-terminal, D2-small domain, of ClpB protein HXV88_00535 PF00004 ATPase family associated with various cellular activities (AAA) HXV88_00540 PF00227 Proteasome subunit HXV88_00550 PF05746 DALR anticodon binding domain HXV88_00550 PF03485 Arginyl tRNA synthetase N terminal domain HXV88_00550 PF00750 tRNA synthetases class I (R) HXV88_00560 PF04545 Sigma-70, region 4 HXV88_00560 PF04542 Sigma-70 region 2 HXV88_00570 PF02673 Bacitracin resistance protein BacA HXV88_00575 PF01263 Aldose 1-epimerase HXV88_00580 PF08544 GHMP kinases C terminal HXV88_00580 PF10509 Galactokinase galactose-binding signature HXV88_00580 PF00288 GHMP kinases N terminal domain HXV88_00585 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HXV88_00585 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HXV88_00590 PF16363 GDP-mannose 4,6 dehydratase HXV88_00595 PF00356 Bacterial regulatory proteins, lacI family HXV88_00600 PF16353 Domain of unknown function(DUF4981) HXV88_00600 PF02929 Beta galactosidase small chain HXV88_00600 PF02837 Glycosyl hydrolases family 2, sugar binding domain HXV88_00600 PF00703 Glycosyl hydrolases family 2 HXV88_00600 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HXV88_00605 PF13407 Periplasmic binding protein domain HXV88_00610 PF00005 ABC transporter HXV88_00615 PF02653 Branched-chain amino acid transport system / permease component HXV88_00620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_00620 PF00672 HAMP domain HXV88_00620 PF02743 Cache domain HXV88_00625 PF05958 tRNA (Uracil-5-)-methyltransferase HXV88_00640 PF00128 Alpha amylase, catalytic domain HXV88_00640 PF02903 Alpha amylase, N-terminal ig-like domain HXV88_00655 PF00012 Hsp70 protein HXV88_00660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HXV88_00660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HXV88_00665 PF05981 CreA protein HXV88_00680 PF01258 Prokaryotic dksA/traR C4-type zinc finger HXV88_00685 PF00120 Glutamine synthetase, catalytic domain HXV88_00690 PF00202 Aminotransferase class-III HXV88_00695 PF13416 Bacterial extracellular solute-binding protein HXV88_00700 PF13416 Bacterial extracellular solute-binding protein HXV88_00705 PF00005 ABC transporter HXV88_00705 PF08402 TOBE domain HXV88_00710 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_00715 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_00720 PF03473 MOSC domain HXV88_00720 PF03475 3-alpha domain HXV88_00735 PF03061 Thioesterase superfamily HXV88_00740 PF00271 Helicase conserved C-terminal domain HXV88_00740 PF00570 HRDC domain HXV88_00740 PF16124 RecQ zinc-binding HXV88_00740 PF09382 RQC domain HXV88_00740 PF00270 DEAD/DEAH box helicase HXV88_00745 PF00034 Cytochrome c HXV88_00750 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HXV88_00760 PF02592 Putative vitamin uptake transporter HXV88_00765 PF03737 Aldolase/RraA HXV88_00770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_00770 PF00672 HAMP domain HXV88_00780 PF01197 Ribosomal protein L31 HXV88_00785 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HXV88_00785 PF00270 DEAD/DEAH box helicase HXV88_00785 PF00271 Helicase conserved C-terminal domain HXV88_00785 PF17764 3′ DNA-binding domain (3′BD) HXV88_00785 PF18074 Primosomal protein N C-terminal domain HXV88_00795 PF13460 NAD(P)H-binding HXV88_00795 PF11066 Protein of unknown function (DUF2867) HXV88_00800 PF03222 Tryptophan/tyrosine permease family HXV88_00805 PF00390 Malic enzyme, N-terminal domain HXV88_00805 PF03949 Malic enzyme, NAD binding domain HXV88_00810 PF03631 Virulence factor BrkB HXV88_00815 PF02580 D-Tyr-tRNA(Tyr) deacylase HXV88_00820 PF17284 Spermidine synthase tetramerisation domain HXV88_00825 PF00583 Acetyltransferase (GNAT) family HXV88_00825 PF09500 Putative thioesterase (yiiD_Cterm) HXV88_00835 PF00271 Helicase conserved C-terminal domain HXV88_00835 PF17191 RecG wedge domain HXV88_00835 PF00270 DEAD/DEAH box helicase HXV88_00840 PF13091 PLD-like domain HXV88_00845 PF02447 GntP family permease HXV88_00850 PF01202 Shikimate kinase HXV88_00855 PF00920 Dehydratase family HXV88_00860 PF01081 KDPG and KHG aldolase HXV88_00865 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HXV88_00865 PF00356 Bacterial regulatory proteins, lacI family HXV88_00875 PF01551 Peptidase family M23 HXV88_00880 PF01676 Metalloenzyme superfamily HXV88_00880 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HXV88_00885 PF00581 Rhodanese-like domain HXV88_00890 PF02556 Preprotein translocase subunit SecB HXV88_00895 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HXV88_00895 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HXV88_00900 PF01521 Iron-sulphur cluster biosynthesis HXV88_00900 PF01106 NifU-like domain HXV88_00905 PF00156 Phosphoribosyl transferase domain HXV88_00910 PF00561 alpha/beta hydrolase fold HXV88_00930 PF16921 Tex protein YqgF-like domain HXV88_00930 PF00575 S1 RNA binding domain HXV88_00930 PF17674 HHH domain HXV88_00930 PF09371 Tex-like protein N-terminal domain HXV88_00935 PF01272 Transcription elongation factor, GreA/GreB, C-term HXV88_00935 PF03449 Transcription elongation factor, N-terminal HXV88_00940 PF00072 Response regulator receiver domain HXV88_00940 PF00486 Transcriptional regulatory protein, C terminal HXV88_00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_00945 PF00672 HAMP domain HXV88_00945 PF00512 His Kinase A (phospho-acceptor) domain HXV88_00955 PF00338 Ribosomal protein S10p/S20e HXV88_00960 PF00297 Ribosomal protein L3 HXV88_00965 PF00573 Ribosomal protein L4/L1 family HXV88_00970 PF00276 Ribosomal protein L23 HXV88_00975 PF00181 Ribosomal Proteins L2, RNA binding domain HXV88_00975 PF03947 Ribosomal Proteins L2, C-terminal domain HXV88_00980 PF00203 Ribosomal protein S19 HXV88_00985 PF00237 Ribosomal protein L22p/L17e HXV88_00990 PF07650 KH domain HXV88_00990 PF00189 Ribosomal protein S3, C-terminal domain HXV88_00995 PF00252 Ribosomal protein L16p/L10e HXV88_01000 PF00831 Ribosomal L29 protein HXV88_01005 PF00366 Ribosomal protein S17 HXV88_01010 PF00238 Ribosomal protein L14p/L23e HXV88_01015 PF00467 KOW motif HXV88_01015 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HXV88_01020 PF00281 Ribosomal protein L5 HXV88_01020 PF00673 ribosomal L5P family C-terminus HXV88_01025 PF00253 Ribosomal protein S14p/S29e HXV88_01030 PF00410 Ribosomal protein S8 HXV88_01035 PF00347 Ribosomal protein L6 HXV88_01040 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HXV88_01045 PF03719 Ribosomal protein S5, C-terminal domain HXV88_01045 PF00333 Ribosomal protein S5, N-terminal domain HXV88_01050 PF00327 Ribosomal protein L30p/L7e HXV88_01055 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HXV88_01060 PF00344 SecY translocase HXV88_01065 PF00444 Ribosomal protein L36 HXV88_01070 PF00416 Ribosomal protein S13/S18 HXV88_01075 PF00411 Ribosomal protein S11 HXV88_01080 PF01479 S4 domain HXV88_01080 PF00163 Ribosomal protein S4/S9 N-terminal domain HXV88_01085 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HXV88_01085 PF01000 RNA polymerase Rpb3/RpoA insert domain HXV88_01085 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HXV88_01090 PF01196 Ribosomal protein L17 HXV88_01120 PF00593 TonB dependent receptor HXV88_01120 PF07715 TonB-dependent Receptor Plug Domain HXV88_01125 PF00990 Diguanylate cyclase, GGDEF domain HXV88_01125 PF17151 Periplasmic sensor domain HXV88_01130 PF00512 His Kinase A (phospho-acceptor) domain HXV88_01130 PF00672 HAMP domain HXV88_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_01135 PF00486 Transcriptional regulatory protein, C terminal HXV88_01135 PF00072 Response regulator receiver domain HXV88_01145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_01145 PF03466 LysR substrate binding domain HXV88_01155 PF02678 Pirin HXV88_01155 PF17954 Quercetinase C-terminal cupin domain HXV88_01160 PF07681 DoxX HXV88_01165 PF17946 RecC C-terminal domain HXV88_01170 PF00580 UvrD/REP helicase N-terminal domain HXV88_01170 PF12705 PD-(D/E)XK nuclease superfamily HXV88_01170 PF13361 UvrD-like helicase C-terminal domain HXV88_01175 PF13538 UvrD-like helicase C-terminal domain HXV88_01190 PF08448 PAS fold HXV88_01190 PF00990 Diguanylate cyclase, GGDEF domain HXV88_01205 PF00392 Bacterial regulatory proteins, gntR family HXV88_01205 PF07702 UTRA domain HXV88_01220 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_01230 PF00005 ABC transporter HXV88_01230 PF08402 TOBE domain HXV88_01240 PF00990 Diguanylate cyclase, GGDEF domain HXV88_01260 PF01053 Cys/Met metabolism PLP-dependent enzyme HXV88_01270 PF12793 Sugar transport-related sRNA regulator N-term HXV88_01270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_01275 PF00141 Peroxidase HXV88_01290 PF03280 Proteobacterial lipase chaperone protein HXV88_01295 PF00561 alpha/beta hydrolase fold HXV88_01300 PF00579 tRNA synthetases class I (W and Y) HXV88_01300 PF01479 S4 domain HXV88_01305 PF00196 Bacterial regulatory proteins, luxR family HXV88_01325 PF00199 Catalase HXV88_01325 PF06628 Catalase-related immune-responsive HXV88_01350 PF10458 Valyl tRNA synthetase tRNA binding arm HXV88_01350 PF00133 tRNA synthetases class I (I, L, M and V) HXV88_01350 PF08264 Anticodon-binding domain of tRNA HXV88_01355 PF04364 DNA polymerase III chi subunit, HolC HXV88_01360 PF00883 Cytosol aminopeptidase family, catalytic domain HXV88_01360 PF02789 Cytosol aminopeptidase family, N-terminal domain HXV88_01365 PF03739 Lipopolysaccharide export system permease LptF/LptG HXV88_01370 PF03739 Lipopolysaccharide export system permease LptF/LptG HXV88_01390 PF00593 TonB dependent receptor HXV88_01390 PF07715 TonB-dependent Receptor Plug Domain HXV88_01400 PF00768 D-alanyl-D-alanine carboxypeptidase HXV88_01405 PF13520 Amino acid permease HXV88_01425 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HXV88_01440 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HXV88_01445 PF02602 Uroporphyrinogen-III synthase HemD HXV88_01450 PF03900 Porphobilinogen deaminase, C-terminal domain HXV88_01450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HXV88_01455 PF12633 Adenylate cyclase NT domain HXV88_01455 PF01295 Adenylate cyclase, class-I HXV88_01460 PF02230 Phospholipase/Carboxylesterase HXV88_01465 PF01491 Frataxin-like domain HXV88_01475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HXV88_01475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HXV88_01480 PF01678 Diaminopimelate epimerase HXV88_01490 PF02899 Phage integrase, N-terminal SAM-like domain HXV88_01490 PF00589 Phage integrase family HXV88_01495 PF13419 Haloacid dehalogenase-like hydrolase HXV88_01505 PF13545 Crp-like helix-turn-helix domain HXV88_01505 PF00027 Cyclic nucleotide-binding domain HXV88_01515 PF07722 Peptidase C26 HXV88_01520 PF04751 Protein of unknown function (DUF615) HXV88_01525 PF01523 Putative modulator of DNA gyrase HXV88_01530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HXV88_01535 PF01722 BolA-like protein HXV88_01545 PF05494 MlaC protein HXV88_01550 PF02470 MlaD protein HXV88_01555 PF02405 Permease MlaE HXV88_01560 PF00005 ABC transporter HXV88_01565 PF00571 CBS domain HXV88_01565 PF01380 SIS domain HXV88_01575 PF06835 Lipopolysaccharide-assembly, LptC-related HXV88_01580 PF03968 OstA-like protein HXV88_01585 PF00005 ABC transporter HXV88_01585 PF12399 Branched-chain amino acid ATP-binding cassette transporter HXV88_01590 PF00309 Sigma-54 factor, Activator interacting domain (AID) HXV88_01590 PF04963 Sigma-54 factor, core binding domain HXV88_01590 PF04552 Sigma-54, DNA binding domain HXV88_01595 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HXV88_01600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HXV88_01605 PF03668 P-loop ATPase protein family HXV88_01610 PF00381 PTS HPr component phosphorylation site HXV88_01615 PF05043 Mga helix-turn-helix domain HXV88_01615 PF08279 HTH domain HXV88_01615 PF00874 PRD domain HXV88_01615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HXV88_01620 PF07071 KDGP aldolase HXV88_01625 PF03841 L-seryl-tRNA selenium transferase HXV88_01630 PF01979 Amidohydrolase family HXV88_01660 PF13180 PDZ domain HXV88_01665 PF00595 PDZ domain HXV88_01665 PF13180 PDZ domain HXV88_01675 PF03969 AFG1-like ATPase HXV88_01680 PF00572 Ribosomal protein L13 HXV88_01685 PF00380 Ribosomal protein S9/S16 HXV88_01690 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HXV88_01690 PF00355 Rieske [2Fe-2S] domain HXV88_01695 PF00033 Cytochrome b/b6/petB HXV88_01695 PF00032 Cytochrome b(C-terminal)/b6/petD HXV88_01700 PF02167 Cytochrome C1 family HXV88_01705 PF02798 Glutathione S-transferase, N-terminal domain HXV88_01705 PF00043 Glutathione S-transferase, C-terminal domain HXV88_01710 PF04386 Stringent starvation protein B HXV88_01720 PF13580 SIS domain HXV88_01725 PF02021 Uncharacterised protein family UPF0102 HXV88_01730 PF04348 LppC putative lipoprotein HXV88_01735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HXV88_01750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HXV88_01755 PF00813 FliP family HXV88_01760 PF01313 Bacterial export proteins, family 3 HXV88_01765 PF01311 Bacterial export proteins, family 1 HXV88_01770 PF01312 FlhB HrpN YscU SpaS Family HXV88_01775 PF00771 FHIPEP family HXV88_01780 PF00158 Sigma-54 interaction domain HXV88_01780 PF02954 Bacterial regulatory protein, Fis family HXV88_01780 PF00072 Response regulator receiver domain HXV88_01785 PF02049 Flagellar hook-basal body complex protein FliE HXV88_01790 PF01514 Secretory protein of YscJ/FliF family HXV88_01790 PF08345 Flagellar M-ring protein C-terminal HXV88_01795 PF14842 FliG N-terminal domain HXV88_01795 PF14841 FliG middle domain HXV88_01795 PF01706 FliG C-terminal domain HXV88_01805 PF18269 T3SS EscN ATPase C-terminal domain HXV88_01805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HXV88_01825 PF13144 Chaperone for flagella basal body P-ring formation HXV88_01830 PF00460 Flagella basal body rod protein HXV88_01835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_01835 PF00460 Flagella basal body rod protein HXV88_01840 PF13860 FlgD Ig-like domain HXV88_01840 PF13861 FlgD Tudor-like domain HXV88_01840 PF03963 Flagellar hook capping protein - N-terminal region HXV88_01845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_01845 PF00460 Flagella basal body rod protein HXV88_01845 PF07559 Flagellar basal body protein FlaE HXV88_01850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_01850 PF00460 Flagella basal body rod protein HXV88_01855 PF00460 Flagella basal body rod protein HXV88_01855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_01860 PF02107 Flagellar L-ring protein HXV88_01865 PF02119 Flagellar P-ring protein HXV88_01875 PF00460 Flagella basal body rod protein HXV88_01875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_01880 PF00669 Bacterial flagellin N-terminal helical region HXV88_01900 PF00669 Bacterial flagellin N-terminal helical region HXV88_01900 PF00700 Bacterial flagellin C-terminal helical region HXV88_01905 PF02465 Flagellar hook-associated protein 2 N-terminus HXV88_01905 PF07195 Flagellar hook-associated protein 2 C-terminus HXV88_01905 PF07196 Flagellin hook IN motif HXV88_01910 PF02561 Flagellar protein FliS HXV88_01930 PF04545 Sigma-70, region 4 HXV88_01930 PF04542 Sigma-70 region 2 HXV88_01935 PF01618 MotA/TolQ/ExbB proton channel family HXV88_01940 PF13677 Membrane MotB of proton-channel complex MotA/MotB HXV88_01940 PF00691 OmpA family HXV88_01950 PF01464 Transglycosylase SLT domain HXV88_01950 PF01476 LysM domain HXV88_01955 PF02381 MraZ protein, putative antitoxin-like HXV88_01960 PF01795 MraW methylase family HXV88_01965 PF04999 Cell division protein FtsL HXV88_01970 PF03717 Penicillin-binding Protein dimerisation domain HXV88_01970 PF00905 Penicillin binding protein transpeptidase domain HXV88_01975 PF08245 Mur ligase middle domain HXV88_01975 PF02875 Mur ligase family, glutamate ligase domain HXV88_01975 PF01225 Mur ligase family, catalytic domain HXV88_01980 PF01225 Mur ligase family, catalytic domain HXV88_01980 PF08245 Mur ligase middle domain HXV88_01980 PF02875 Mur ligase family, glutamate ligase domain HXV88_01985 PF00953 Glycosyl transferase family 4 HXV88_01985 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HXV88_01990 PF02875 Mur ligase family, glutamate ligase domain HXV88_01990 PF08245 Mur ligase middle domain HXV88_01995 PF01098 Cell cycle protein HXV88_02000 PF03033 Glycosyltransferase family 28 N-terminal domain HXV88_02000 PF04101 Glycosyltransferase family 28 C-terminal domain HXV88_02005 PF01225 Mur ligase family, catalytic domain HXV88_02005 PF02875 Mur ligase family, glutamate ligase domain HXV88_02005 PF08245 Mur ligase middle domain HXV88_02010 PF03799 Cell division protein FtsQ HXV88_02010 PF08478 POTRA domain, FtsQ-type HXV88_02015 PF02491 SHS2 domain inserted in FTSA HXV88_02020 PF00091 Tubulin/FtsZ family, GTPase domain HXV88_02020 PF12327 FtsZ family, C-terminal domain HXV88_02025 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HXV88_02035 PF07516 SecA Wing and Scaffold domain HXV88_02035 PF01043 SecA preprotein cross-linking domain HXV88_02035 PF07517 SecA DEAD-like domain HXV88_02035 PF02810 SEC-C motif HXV88_02040 PF00293 NUDIX domain HXV88_02045 PF03884 DNA gyrase inhibitor YacG HXV88_02050 PF07072 Cell division protein HXV88_02055 PF01121 Dephospho-CoA kinase HXV88_02060 PF01478 Type IV leader peptidase family HXV88_02060 PF06750 Bacterial Peptidase A24 N-terminal domain HXV88_02065 PF00482 Type II secretion system (T2SS), protein F HXV88_02070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HXV88_02070 PF00437 Type II/IV secretion system protein HXV88_02075 PF07963 Prokaryotic N-terminal methylation motif HXV88_02080 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HXV88_02080 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HXV88_02090 PF01510 N-acetylmuramoyl-L-alanine amidase HXV88_02095 PF00392 Bacterial regulatory proteins, gntR family HXV88_02095 PF07729 FCD domain HXV88_02100 PF00456 Transketolase, thiamine diphosphate binding domain HXV88_02100 PF17831 Pyruvate dehydrogenase E1 component middle domain HXV88_02105 PF02817 e3 binding domain HXV88_02105 PF00364 Biotin-requiring enzyme HXV88_02105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HXV88_02110 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_02110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HXV88_02115 PF00563 EAL domain HXV88_02115 PF00990 Diguanylate cyclase, GGDEF domain HXV88_02115 PF03707 Bacterial signalling protein N terminal repeat HXV88_02120 PF00672 HAMP domain HXV88_02120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_02120 PF12729 Four helix bundle sensory module for signal transduction HXV88_02125 PF01734 Patatin-like phospholipase HXV88_02130 PF11791 Aconitate B N-terminal domain HXV88_02130 PF06434 Aconitate hydratase 2 N-terminus HXV88_02130 PF00330 Aconitase family (aconitate hydratase) HXV88_02135 PF12792 CSS motif domain associated with EAL HXV88_02135 PF00563 EAL domain HXV88_02145 PF02492 CobW/HypB/UreG, nucleotide-binding domain HXV88_02145 PF07683 Cobalamin synthesis protein cobW C-terminal domain HXV88_02150 PF00873 AcrB/AcrD/AcrF family HXV88_02165 PF07690 Major Facilitator Superfamily HXV88_02175 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HXV88_02180 PF02152 Dihydroneopterin aldolase HXV88_02185 PF02660 Glycerol-3-phosphate acyltransferase HXV88_02215 PF07411 Domain of unknown function (DUF1508) HXV88_02280 PF05154 TM2 domain HXV88_02320 PF02753 Pili assembly chaperone PapD, C-terminal domain HXV88_02320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HXV88_02325 PF13953 PapC C-terminal domain HXV88_02325 PF13954 PapC N-terminal domain HXV88_02325 PF00577 Outer membrane usher protein HXV88_02335 PF12792 CSS motif domain associated with EAL HXV88_02335 PF00563 EAL domain HXV88_02365 PF00206 Lyase HXV88_02365 PF14698 Argininosuccinate lyase C-terminal HXV88_02370 PF00764 Arginosuccinate synthase HXV88_02375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HXV88_02375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HXV88_02380 PF00696 Amino acid kinase family HXV88_02385 PF01118 Semialdehyde dehydrogenase, NAD binding domain HXV88_02385 PF02774 Semialdehyde dehydrogenase, dimerisation domain HXV88_02390 PF07687 Peptidase dimerisation domain HXV88_02390 PF01546 Peptidase family M20/M25/M40 HXV88_02395 PF00311 Phosphoenolpyruvate carboxylase HXV88_02400 PF04073 Aminoacyl-tRNA editing domain HXV88_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_02410 PF03466 LysR substrate binding domain HXV88_02415 PF03788 LrgA family HXV88_02420 PF04172 LrgB-like family HXV88_02430 PF01734 Patatin-like phospholipase HXV88_02435 PF05188 MutS domain II HXV88_02435 PF05192 MutS domain III HXV88_02435 PF05190 MutS family domain IV HXV88_02435 PF00488 MutS domain V HXV88_02435 PF01624 MutS domain I HXV88_02440 PF02464 Competence-damaged protein HXV88_02445 PF00154 recA bacterial DNA recombination protein HXV88_02450 PF02631 RecX family HXV88_02455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HXV88_02455 PF01411 tRNA synthetases class II (A) HXV88_02455 PF02272 DHHA1 domain HXV88_02460 PF13840 ACT domain HXV88_02460 PF00696 Amino acid kinase family HXV88_02460 PF01842 ACT domain HXV88_02465 PF02599 Global regulator protein family HXV88_02500 PF00768 D-alanyl-D-alanine carboxypeptidase HXV88_02505 PF09335 SNARE associated Golgi protein HXV88_02510 PF00571 CBS domain HXV88_02510 PF03471 Transporter associated domain HXV88_02510 PF01595 Cyclin M transmembrane N-terminal domain HXV88_02515 PF00710 Asparaginase, N-terminal HXV88_02515 PF17763 Glutaminase/Asparaginase C-terminal domain HXV88_02530 PF00356 Bacterial regulatory proteins, lacI family HXV88_02535 PF02378 Phosphotransferase system, EIIC HXV88_02535 PF00367 phosphotransferase system, EIIB HXV88_02540 PF11941 Domain of unknown function (DUF3459) HXV88_02540 PF00128 Alpha amylase, catalytic domain HXV88_02545 PF14602 Hexapeptide repeat of succinyl-transferase HXV88_02545 PF12464 Maltose acetyltransferase HXV88_02555 PF00849 RNA pseudouridylate synthase HXV88_02560 PF00176 SNF2 family N-terminal domain HXV88_02560 PF18339 RapA N-terminal Tudor like domain 1 HXV88_02560 PF12137 RNA polymerase recycling family C-terminal HXV88_02560 PF18337 RapA N-terminal Tudor like domain HXV88_02560 PF00271 Helicase conserved C-terminal domain HXV88_02590 PF04363 Protein of unknown function (DUF496) HXV88_02610 PF00994 Probable molybdopterin binding domain HXV88_02610 PF02464 Competence-damaged protein HXV88_02620 PF04204 Homoserine O-succinyltransferase HXV88_02630 PF01037 Lrp/AsnC ligand binding domain HXV88_02635 PF00884 Sulfatase HXV88_02655 PF02903 Alpha amylase, N-terminal ig-like domain HXV88_02655 PF00128 Alpha amylase, catalytic domain HXV88_02655 PF16657 Maltogenic Amylase, C-terminal domain HXV88_02675 PF00106 short chain dehydrogenase HXV88_02680 PF03577 Peptidase family C69 HXV88_02690 PF00465 Iron-containing alcohol dehydrogenase HXV88_02695 PF02142 MGS-like domain HXV88_02700 PF00210 Ferritin-like domain HXV88_02715 PF17176 tRNA-binding domain HXV88_02715 PF05127 Helicase HXV88_02715 PF13718 GNAT acetyltransferase 2 HXV88_02715 PF08351 Domain of unknown function (DUF1726) HXV88_02720 PF00106 short chain dehydrogenase HXV88_02725 PF01584 CheW-like domain HXV88_02725 PF00072 Response regulator receiver domain HXV88_02735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HXV88_02735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HXV88_02740 PF02698 DUF218 domain HXV88_02745 PF01752 Collagenase HXV88_02745 PF08453 Peptidase family M9 N-terminal HXV88_02750 PF00501 AMP-binding enzyme HXV88_02755 PF13378 Enolase C-terminal domain-like HXV88_02760 PF00378 Enoyl-CoA hydratase/isomerase HXV88_02765 PF12697 Alpha/beta hydrolase family HXV88_02770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HXV88_02770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HXV88_02770 PF16582 Middle domain of thiamine pyrophosphate HXV88_02775 PF00425 chorismate binding enzyme HXV88_02780 PF01040 UbiA prenyltransferase family HXV88_02805 PF00270 DEAD/DEAH box helicase HXV88_02805 PF00271 Helicase conserved C-terminal domain HXV88_02805 PF03880 DbpA RNA binding domain HXV88_02810 PF07662 Na+ dependent nucleoside transporter C-terminus HXV88_02810 PF01773 Na+ dependent nucleoside transporter N-terminus HXV88_02810 PF07670 Nucleoside recognition HXV88_02815 PF04307 LexA-binding, inner membrane-associated putative hydrolase HXV88_02820 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HXV88_02825 PF01544 CorA-like Mg2+ transporter protein HXV88_02840 PF00226 DnaJ domain HXV88_02840 PF00684 DnaJ central domain HXV88_02840 PF01556 DnaJ C terminal domain HXV88_02845 PF03471 Transporter associated domain HXV88_02845 PF02080 TrkA-C domain HXV88_02845 PF00999 Sodium/hydrogen exchanger family HXV88_02850 PF05068 Mannitol repressor HXV88_02855 PF08125 Mannitol dehydrogenase C-terminal domain HXV88_02855 PF01232 Mannitol dehydrogenase Rossmann domain HXV88_02860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HXV88_02860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HXV88_02860 PF02378 Phosphotransferase system, EIIC HXV88_02865 PF03279 Bacterial lipid A biosynthesis acyltransferase HXV88_02870 PF01467 Cytidylyltransferase-like HXV88_02870 PF00294 pfkB family carbohydrate kinase HXV88_02875 PF02321 Outer membrane efflux protein HXV88_02880 PF00293 NUDIX domain HXV88_02885 PF06853 Protein of unknown function (DUF1249) HXV88_02890 PF00149 Calcineurin-like phosphoesterase HXV88_02895 PF05728 Uncharacterised protein family (UPF0227) HXV88_02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_02900 PF00986 DNA gyrase B subunit, carboxyl terminus HXV88_02900 PF00204 DNA gyrase B HXV88_02900 PF01751 Toprim domain HXV88_02905 PF00521 DNA gyrase/topoisomerase IV, subunit A HXV88_02905 PF03989 DNA gyrase C-terminal domain, beta-propeller HXV88_02920 PF00854 POT family HXV88_02940 PF00684 DnaJ central domain HXV88_02940 PF01556 DnaJ C terminal domain HXV88_02940 PF00226 DnaJ domain HXV88_02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_02955 PF03466 LysR substrate binding domain HXV88_02960 PF00578 AhpC/TSA family HXV88_02980 PF01553 Acyltransferase HXV88_02985 PF04012 PspA/IM30 family HXV88_03000 PF01541 GIY-YIG catalytic domain HXV88_03010 PF00892 EamA-like transporter family HXV88_03015 PF03167 Uracil DNA glycosylase superfamily HXV88_03020 PF00892 EamA-like transporter family HXV88_03025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_03025 PF03466 LysR substrate binding domain HXV88_03030 PF00950 ABC 3 transport family HXV88_03035 PF00005 ABC transporter HXV88_03040 PF01297 Zinc-uptake complex component A periplasmic HXV88_03060 PF01551 Peptidase family M23 HXV88_03060 PF01476 LysM domain HXV88_03060 PF08525 Opacity-associated protein A N-terminal motif HXV88_03065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HXV88_03070 PF04222 Protein of unknown function (DUF416) HXV88_03075 PF01609 Transposase DDE domain HXV88_03075 PF13006 Insertion element 4 transposase N-terminal HXV88_03080 PF00571 CBS domain HXV88_03080 PF03471 Transporter associated domain HXV88_03080 PF01595 Cyclin M transmembrane N-terminal domain HXV88_03085 PF01578 Cytochrome C assembly protein HXV88_03090 PF02881 SRP54-type protein, helical bundle domain HXV88_03090 PF00448 SRP54-type protein, GTPase domain HXV88_03090 PF02978 Signal peptide binding domain HXV88_03095 PF00886 Ribosomal protein S16 HXV88_03100 PF01782 RimM N-terminal domain HXV88_03100 PF05239 PRC-barrel domain HXV88_03105 PF01746 tRNA (Guanine-1)-methyltransferase HXV88_03110 PF01245 Ribosomal protein L19 HXV88_03120 PF02976 DNA mismatch repair enzyme MutH HXV88_03125 PF00293 NUDIX domain HXV88_03130 PF02896 PEP-utilising enzyme, TIM barrel domain HXV88_03130 PF05524 PEP-utilising enzyme, N-terminal HXV88_03130 PF01590 GAF domain HXV88_03130 PF00391 PEP-utilising enzyme, mobile domain HXV88_03135 PF01790 Prolipoprotein diacylglyceryl transferase HXV88_03140 PF00303 Thymidylate synthase HXV88_03145 PF06965 Na+/H+ antiporter 1 HXV88_03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_03155 PF03466 LysR substrate binding domain HXV88_03160 PF01022 Bacterial regulatory protein, arsR family HXV88_03165 PF01649 Ribosomal protein S20 HXV88_03170 PF03023 Lipid II flippase MurJ HXV88_03175 PF01687 Riboflavin kinase HXV88_03175 PF06574 FAD synthetase HXV88_03180 PF06827 Zinc finger found in FPG and IleRS HXV88_03180 PF00133 tRNA synthetases class I (I, L, M and V) HXV88_03180 PF08264 Anticodon-binding domain of tRNA HXV88_03185 PF01252 Signal peptidase (SPase) II HXV88_03190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HXV88_03195 PF02401 LytB protein HXV88_03200 PF00114 Pilin (bacterial filament) HXV88_03200 PF07963 Prokaryotic N-terminal methylation motif HXV88_03220 PF05567 Neisseria PilC beta-propeller domain HXV88_03240 PF00795 Carbon-nitrogen hydrolase HXV88_03240 PF02540 NAD synthase HXV88_03245 PF00543 Nitrogen regulatory protein P-II HXV88_03255 PF02664 S-Ribosylhomocysteinase (LuxS) HXV88_03265 PF07963 Prokaryotic N-terminal methylation motif HXV88_03265 PF14245 Type IV pilin PilA HXV88_03270 PF01026 TatD related DNase HXV88_03275 PF01773 Na+ dependent nucleoside transporter N-terminus HXV88_03275 PF07662 Na+ dependent nucleoside transporter C-terminus HXV88_03275 PF07670 Nucleoside recognition HXV88_03285 PF01791 DeoC/LacD family aldolase HXV88_03290 PF00591 Glycosyl transferase family, a/b domain HXV88_03290 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HXV88_03290 PF02885 Glycosyl transferase family, helical bundle domain HXV88_03295 PF01676 Metalloenzyme superfamily HXV88_03300 PF01048 Phosphorylase superfamily HXV88_03310 PF18429 Domain of unknown function (DUF5609) HXV88_03325 PF18073 Rubredoxin metal binding domain HXV88_03330 PF07238 PilZ domain HXV88_03335 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HXV88_03340 PF00216 Bacterial DNA-binding protein HXV88_03350 PF01411 tRNA synthetases class II (A) HXV88_03350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HXV88_03350 PF02272 DHHA1 domain HXV88_03355 PF01566 Natural resistance-associated macrophage protein HXV88_03360 PF01250 Ribosomal protein S6 HXV88_03365 PF01084 Ribosomal protein S18 HXV88_03370 PF01281 Ribosomal protein L9, N-terminal domain HXV88_03370 PF03948 Ribosomal protein L9, C-terminal domain HXV88_03375 PF00175 Oxidoreductase NAD-binding domain HXV88_03375 PF00970 Oxidoreductase FAD-binding domain HXV88_03400 PF00107 Zinc-binding dehydrogenase HXV88_03400 PF08240 Alcohol dehydrogenase GroES-like domain HXV88_03405 PF09335 SNARE associated Golgi protein HXV88_03410 PF00675 Insulinase (Peptidase family M16) HXV88_03410 PF05193 Peptidase M16 inactive domain HXV88_03415 PF04262 Glutamate-cysteine ligase HXV88_03420 PF00501 AMP-binding enzyme HXV88_03430 PF13673 Acetyltransferase (GNAT) domain HXV88_03430 PF00583 Acetyltransferase (GNAT) family HXV88_03440 PF17868 AAA lid domain HXV88_03440 PF07728 AAA domain (dynein-related subfamily) HXV88_03440 PF12592 Protein of unknown function (DUF3763) HXV88_03445 PF05762 VWA domain containing CoxE-like protein HXV88_03450 PF00072 Response regulator receiver domain HXV88_03450 PF00990 Diguanylate cyclase, GGDEF domain HXV88_03460 PF00009 Elongation factor Tu GTP binding domain HXV88_03460 PF16658 Class II release factor RF3, C-terminal domain HXV88_03460 PF03144 Elongation factor Tu domain 2 HXV88_03465 PF00583 Acetyltransferase (GNAT) family HXV88_03470 PF07690 Major Facilitator Superfamily HXV88_03475 PF03466 LysR substrate binding domain HXV88_03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_03480 PF02868 Thermolysin metallopeptidase, alpha-helical domain HXV88_03480 PF04151 Bacterial pre-peptidase C-terminal domain HXV88_03480 PF07504 Fungalysin/Thermolysin Propeptide Motif HXV88_03480 PF01447 Thermolysin metallopeptidase, catalytic domain HXV88_03480 PF03413 Peptidase propeptide and YPEB domain HXV88_03485 PF13302 Acetyltransferase (GNAT) domain HXV88_03490 PF13302 Acetyltransferase (GNAT) domain HXV88_03500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HXV88_03500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HXV88_03505 PF07690 Major Facilitator Superfamily HXV88_03510 PF01725 Ham1 family HXV88_03515 PF04055 Radical SAM superfamily HXV88_03515 PF06969 HemN C-terminal domain HXV88_03520 PF03889 Alternative ribosome-rescue factor A HXV88_03525 PF13411 MerR HTH family regulatory protein HXV88_03530 PF01808 AICARFT/IMPCHase bienzyme HXV88_03530 PF02142 MGS-like domain HXV88_03535 PF02844 Phosphoribosylglycinamide synthetase, N domain HXV88_03535 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HXV88_03535 PF02843 Phosphoribosylglycinamide synthetase, C domain HXV88_03555 PF04546 Sigma-70, non-essential region HXV88_03555 PF04539 Sigma-70 region 3 HXV88_03555 PF03979 Sigma-70 factor, region 1.1 HXV88_03555 PF04545 Sigma-70, region 4 HXV88_03555 PF00140 Sigma-70 factor, region 1.2 HXV88_03555 PF04542 Sigma-70 region 2 HXV88_03560 PF08275 DNA primase catalytic core, N-terminal domain HXV88_03560 PF08278 DNA primase DnaG DnaB-binding HXV88_03560 PF10410 DnaB-helicase binding domain of primase HXV88_03560 PF01807 CHC2 zinc finger HXV88_03565 PF09424 Yqey-like protein HXV88_03570 PF01165 Ribosomal protein S21 HXV88_03575 PF00814 Glycoprotease family HXV88_03580 PF03605 Anaerobic c4-dicarboxylate membrane transporter HXV88_03585 PF00206 Lyase HXV88_03585 PF10415 Fumarase C C-terminus HXV88_03590 PF04186 FxsA cytoplasmic membrane protein HXV88_03595 PF01554 MatE HXV88_03600 PF00166 Chaperonin 10 Kd subunit HXV88_03605 PF00118 TCP-1/cpn60 chaperonin family HXV88_03615 PF03707 Bacterial signalling protein N terminal repeat HXV88_03615 PF00990 Diguanylate cyclase, GGDEF domain HXV88_03615 PF00563 EAL domain HXV88_03660 PF02867 Ribonucleotide reductase, barrel domain HXV88_03660 PF00317 Ribonucleotide reductase, all-alpha domain HXV88_03660 PF08343 Ribonucleotide reductase N-terminal HXV88_03670 PF13638 PIN domain HXV88_03670 PF02562 PhoH-like protein HXV88_03675 PF00005 ABC transporter HXV88_03680 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_03700 PF00694 Aconitase C-terminal domain HXV88_03705 PF00330 Aconitase family (aconitate hydratase) HXV88_03710 PF00180 Isocitrate/isopropylmalate dehydrogenase HXV88_03715 PF00682 HMGL-like HXV88_03715 PF08502 LeuA allosteric (dimerisation) domain HXV88_03725 PF01569 PAP2 superfamily HXV88_03740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HXV88_03740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HXV88_03740 PF00205 Thiamine pyrophosphate enzyme, central domain HXV88_03745 PF10369 Small subunit of acetolactate synthase HXV88_03760 PF02954 Bacterial regulatory protein, Fis family HXV88_03765 PF01207 Dihydrouridine synthase (Dus) HXV88_03770 PF02321 Outer membrane efflux protein HXV88_03775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_03805 PF00072 Response regulator receiver domain HXV88_03810 PF00854 POT family HXV88_03815 PF00483 Nucleotidyl transferase HXV88_03825 PF07085 DRTGG domain HXV88_03825 PF01515 Phosphate acetyl/butaryl transferase HXV88_03830 PF00871 Acetokinase family HXV88_03835 PF04217 Protein of unknown function, DUF412 HXV88_03840 PF03887 YfbU domain HXV88_03845 PF00578 AhpC/TSA family HXV88_03850 PF01842 ACT domain HXV88_03855 PF00701 Dihydrodipicolinate synthetase family HXV88_03860 PF06804 NlpB/DapX lipoprotein HXV88_03865 PF01259 SAICAR synthetase HXV88_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_03875 PF03466 LysR substrate binding domain HXV88_03880 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HXV88_03900 PF00989 PAS fold HXV88_03900 PF18415 Histidine kinase receptor ArcB trans-membrane domain HXV88_03900 PF00072 Response regulator receiver domain HXV88_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_03900 PF01627 Hpt domain HXV88_03900 PF00512 His Kinase A (phospho-acceptor) domain HXV88_03905 PF01966 HD domain HXV88_03905 PF13286 Phosphohydrolase-associated domain HXV88_03915 PF00512 His Kinase A (phospho-acceptor) domain HXV88_03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_03915 PF09456 RcsC Alpha-Beta-Loop (ABL) HXV88_03915 PF00072 Response regulator receiver domain HXV88_03920 PF00563 EAL domain HXV88_03920 PF03707 Bacterial signalling protein N terminal repeat HXV88_03920 PF00990 Diguanylate cyclase, GGDEF domain HXV88_03925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_03925 PF00672 HAMP domain HXV88_03930 PF02357 Transcription termination factor nusG HXV88_03935 PF03180 NLPA lipoprotein HXV88_03940 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_03945 PF09383 NIL domain HXV88_03945 PF00005 ABC transporter HXV88_03955 PF00480 ROK family HXV88_03960 PF08331 Domain of unknown function (DUF1730) HXV88_03965 PF01256 Carbohydrate kinase HXV88_03965 PF03853 YjeF-related protein N-terminus HXV88_03970 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HXV88_03975 PF01520 N-acetylmuramoyl-L-alanine amidase HXV88_03980 PF01119 DNA mismatch repair protein, C-terminal domain HXV88_03980 PF08676 MutL C terminal dimerisation domain HXV88_03985 PF01119 DNA mismatch repair protein, C-terminal domain HXV88_03985 PF08676 MutL C terminal dimerisation domain HXV88_03995 PF17209 Hfq protein HXV88_04000 PF16360 GTP-binding GTPase Middle Region HXV88_04000 PF13167 GTP-binding GTPase N-terminal HXV88_04000 PF01926 50S ribosome-binding GTPase HXV88_04005 PF01145 SPFH domain / Band 7 family HXV88_04005 PF12221 Bacterial membrane protein N terminal HXV88_04010 PF01145 SPFH domain / Band 7 family HXV88_04015 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HXV88_04020 PF00348 Polyprenyl synthetase HXV88_04025 PF00829 Ribosomal prokaryotic L21 protein HXV88_04030 PF01016 Ribosomal L27 protein HXV88_04035 PF01018 GTP1/OBG HXV88_04035 PF01926 50S ribosome-binding GTPase HXV88_04055 PF00296 Luciferase-like monooxygenase HXV88_04075 PF00149 Calcineurin-like phosphoesterase HXV88_04080 PF04379 ApaG domain HXV88_04085 PF00398 Ribosomal RNA adenine dimethylase HXV88_04090 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HXV88_04095 PF09312 SurA N-terminal domain HXV88_04095 PF00639 PPIC-type PPIASE domain HXV88_04100 PF04453 LPS transport system D HXV88_04100 PF03968 OstA-like protein HXV88_04105 PF01636 Phosphotransferase enzyme family HXV88_04110 PF00483 Nucleotidyl transferase HXV88_04115 PF05099 Tellurite resistance protein TerB HXV88_04115 PF00226 DnaJ domain HXV88_04120 PF07687 Peptidase dimerisation domain HXV88_04120 PF01546 Peptidase family M20/M25/M40 HXV88_04125 PF00156 Phosphoribosyl transferase domain HXV88_04135 PF07417 Sigma factor-binding transcriptional regulator Crl HXV88_04140 PF01472 PUA domain HXV88_04140 PF00696 Amino acid kinase family HXV88_04145 PF00171 Aldehyde dehydrogenase family HXV88_04155 PF00459 Inositol monophosphatase family HXV88_04160 PF03795 YCII-related domain HXV88_04165 PF04279 Intracellular septation protein A HXV88_04170 PF00282 Pyridoxal-dependent decarboxylase conserved domain HXV88_04175 PF03006 Haemolysin-III related HXV88_04180 PF02080 TrkA-C domain HXV88_04180 PF06826 Predicted Permease Membrane Region HXV88_04195 PF00563 EAL domain HXV88_04195 PF03707 Bacterial signalling protein N terminal repeat HXV88_04195 PF00990 Diguanylate cyclase, GGDEF domain HXV88_04200 PF06877 Regulator of ribonuclease activity B HXV88_04215 PF00561 alpha/beta hydrolase fold HXV88_04220 PF00194 Eukaryotic-type carbonic anhydrase HXV88_04230 PF00107 Zinc-binding dehydrogenase HXV88_04230 PF08240 Alcohol dehydrogenase GroES-like domain HXV88_04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_04235 PF03466 LysR substrate binding domain HXV88_04240 PF00367 phosphotransferase system, EIIB HXV88_04240 PF02378 Phosphotransferase system, EIIC HXV88_04240 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HXV88_04245 PF00474 Sodium:solute symporter family HXV88_04255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HXV88_04255 PF02785 Biotin carboxylase C-terminal domain HXV88_04255 PF00289 Biotin carboxylase, N-terminal domain HXV88_04260 PF00364 Biotin-requiring enzyme HXV88_04265 PF01220 Dehydroquinase class II HXV88_04270 PF13193 AMP-binding enzyme C-terminal domain HXV88_04270 PF00501 AMP-binding enzyme HXV88_04270 PF16177 Acetyl-coenzyme A synthetase N-terminus HXV88_04280 PF03707 Bacterial signalling protein N terminal repeat HXV88_04280 PF00990 Diguanylate cyclase, GGDEF domain HXV88_04280 PF00563 EAL domain HXV88_04290 PF02613 Nitrate reductase delta subunit HXV88_04295 PF01568 Molydopterin dinucleotide binding domain HXV88_04295 PF00384 Molybdopterin oxidoreductase HXV88_04295 PF18364 Molybdopterin oxidoreductase N-terminal domain HXV88_04300 PF03264 NapC/NirT cytochrome c family, N-terminal region HXV88_04305 PF00072 Response regulator receiver domain HXV88_04305 PF00486 Transcriptional regulatory protein, C terminal HXV88_04315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HXV88_04320 PF01627 Hpt domain HXV88_04320 PF00512 His Kinase A (phospho-acceptor) domain HXV88_04320 PF00072 Response regulator receiver domain HXV88_04320 PF00672 HAMP domain HXV88_04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_04330 PF00464 Serine hydroxymethyltransferase HXV88_04335 PF03477 ATP cone domain HXV88_04340 PF01872 RibD C-terminal domain HXV88_04340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HXV88_04345 PF00677 Lumazine binding domain HXV88_04350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HXV88_04350 PF00925 GTP cyclohydrolase II HXV88_04355 PF00885 6,7-dimethyl-8-ribityllumazine synthase HXV88_04360 PF01029 NusB family HXV88_04365 PF00586 AIR synthase related protein, N-terminal domain HXV88_04365 PF02769 AIR synthase related protein, C-terminal domain HXV88_04370 PF04608 Phosphatidylglycerophosphatase A HXV88_04375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_04375 PF00005 ABC transporter HXV88_04380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_04390 PF12911 N-terminal TM domain of oligopeptide transport permease C HXV88_04390 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_04395 PF02779 Transketolase, pyrimidine binding domain HXV88_04395 PF02780 Transketolase, C-terminal domain HXV88_04395 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HXV88_04400 PF00348 Polyprenyl synthetase HXV88_04405 PF02609 Exonuclease VII small subunit HXV88_04410 PF01618 MotA/TolQ/ExbB proton channel family HXV88_04415 PF00691 OmpA family HXV88_04415 PF13677 Membrane MotB of proton-channel complex MotA/MotB HXV88_04420 PF03449 Transcription elongation factor, N-terminal HXV88_04420 PF01272 Transcription elongation factor, GreA/GreB, C-term HXV88_04430 PF01985 CRS1 / YhbY (CRM) domain HXV88_04435 PF01728 FtsJ-like methyltransferase HXV88_04440 PF01434 Peptidase family M41 HXV88_04440 PF06480 FtsH Extracellular HXV88_04440 PF00004 ATPase family associated with various cellular activities (AAA) HXV88_04440 PF17862 AAA+ lid domain HXV88_04445 PF00809 Pterin binding enzyme HXV88_04450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HXV88_04450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HXV88_04450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HXV88_04450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HXV88_04455 PF00121 Triosephosphate isomerase HXV88_04460 PF03840 Preprotein translocase SecG subunit HXV88_04475 PF17384 RimP C-terminal SH3 domain HXV88_04475 PF02576 RimP N-terminal domain HXV88_04480 PF00575 S1 RNA binding domain HXV88_04480 PF08529 NusA N-terminal domain HXV88_04480 PF13184 NusA-like KH domain HXV88_04485 PF00009 Elongation factor Tu GTP binding domain HXV88_04485 PF11987 Translation-initiation factor 2 HXV88_04485 PF08364 Bacterial translation initiation factor IF-2 associated region HXV88_04485 PF04760 Translation initiation factor IF-2, N-terminal region HXV88_04490 PF02033 Ribosome-binding factor A HXV88_04495 PF16198 tRNA pseudouridylate synthase B C-terminal domain HXV88_04495 PF01509 TruB family pseudouridylate synthase (N terminal domain) HXV88_04495 PF09157 Pseudouridine synthase II TruB, C-terminal HXV88_04500 PF00312 Ribosomal protein S15 HXV88_04505 PF01138 3' exoribonuclease family, domain 1 HXV88_04505 PF00013 KH domain HXV88_04505 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HXV88_04505 PF03725 3' exoribonuclease family, domain 2 HXV88_04505 PF00575 S1 RNA binding domain HXV88_04510 PF00072 Response regulator receiver domain HXV88_04510 PF01339 CheB methylesterase HXV88_04515 PF03975 CheD chemotactic sensory transduction HXV88_04520 PF03705 CheR methyltransferase, all-alpha domain HXV88_04520 PF01739 CheR methyltransferase, SAM binding domain HXV88_04525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_04525 PF00672 HAMP domain HXV88_04530 PF01584 CheW-like domain HXV88_04535 PF12729 Four helix bundle sensory module for signal transduction HXV88_04535 PF00672 HAMP domain HXV88_04535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_04540 PF02895 Signal transducing histidine kinase, homodimeric domain HXV88_04540 PF01584 CheW-like domain HXV88_04540 PF07194 P2 response regulator binding domain HXV88_04540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_04540 PF01627 Hpt domain HXV88_04550 PF00072 Response regulator receiver domain HXV88_04555 PF02743 Cache domain HXV88_04555 PF00672 HAMP domain HXV88_04555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_04565 PF03466 LysR substrate binding domain HXV88_04570 PF01810 LysE type translocator HXV88_04575 PF12392 Collagenase HXV88_04575 PF01136 Peptidase family U32 HXV88_04580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HXV88_04580 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HXV88_04585 PF02805 Metal binding domain of Ada HXV88_04585 PF06029 AlkA N-terminal domain HXV88_04585 PF00730 HhH-GPD superfamily base excision DNA repair protein HXV88_04585 PF12833 Helix-turn-helix domain HXV88_04590 PF00114 Pilin (bacterial filament) HXV88_04590 PF07963 Prokaryotic N-terminal methylation motif HXV88_04620 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HXV88_04645 PF00106 short chain dehydrogenase HXV88_04650 PF03573 outer membrane porin, OprD family HXV88_04655 PF00672 HAMP domain HXV88_04655 PF16591 Helical bimodular sensor domain HXV88_04655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_04665 PF05638 Type VI secretion system effector, Hcp HXV88_04670 PF04717 Type VI secretion system, phage-baseplate injector HXV88_04715 PF01817 Chorismate mutase type II HXV88_04715 PF00800 Prephenate dehydratase HXV88_04730 PF06508 Queuosine biosynthesis protein QueC HXV88_04745 PF08349 Protein of unknown function (DUF1722) HXV88_04750 PF13411 MerR HTH family regulatory protein HXV88_04755 PF00875 DNA photolyase HXV88_04755 PF03441 FAD binding domain of DNA photolyase HXV88_04765 PF00106 short chain dehydrogenase HXV88_04810 PF02424 ApbE family HXV88_04815 PF00175 Oxidoreductase NAD-binding domain HXV88_04815 PF00111 2Fe-2S iron-sulfur cluster binding domain HXV88_04815 PF00970 Oxidoreductase FAD-binding domain HXV88_04820 PF02508 Rnf-Nqr subunit, membrane protein HXV88_04825 PF02508 Rnf-Nqr subunit, membrane protein HXV88_04830 PF04205 FMN-binding domain HXV88_04835 PF03116 NQR2, RnfD, RnfE family HXV88_04840 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HXV88_04840 PF11973 NQRA C-terminal domain HXV88_04845 PF01722 BolA-like protein HXV88_04850 PF05175 Methyltransferase small domain HXV88_04860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HXV88_04865 PF07690 Major Facilitator Superfamily HXV88_04870 PF03502 Nucleoside-specific channel-forming protein, Tsx HXV88_04875 PF04461 Protein of unknown function (DUF520) HXV88_04880 PF08546 Ketopantoate reductase PanE/ApbA C terminal HXV88_04880 PF02558 Ketopantoate reductase PanE/ApbA HXV88_04885 PF01965 DJ-1/PfpI family HXV88_04895 PF11798 IMS family HHH motif HXV88_04895 PF11799 impB/mucB/samB family C-terminal domain HXV88_04895 PF00817 impB/mucB/samB family HXV88_04900 PF00672 HAMP domain HXV88_04900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_04905 PF03466 LysR substrate binding domain HXV88_04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_04915 PF04241 Protein of unknown function (DUF423) HXV88_04920 PF18125 RlmM ferredoxin-like domain HXV88_04920 PF01728 FtsJ-like methyltransferase HXV88_04930 PF18324 Hypothetical protein TT1725 HXV88_04930 PF00180 Isocitrate/isopropylmalate dehydrogenase HXV88_04935 PF01367 5'-3' exonuclease, C-terminal SAM fold HXV88_04935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HXV88_04940 PF03641 Possible lysine decarboxylase HXV88_04940 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HXV88_04940 PF11892 Domain of unknown function (DUF3412) HXV88_04945 PF17158 Membrane-associated sensor, integral membrane domain HXV88_04945 PF00990 Diguanylate cyclase, GGDEF domain HXV88_04955 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HXV88_04955 PF14489 QueF-like protein HXV88_04960 PF07348 Syd protein (SUKH-2) HXV88_04965 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HXV88_04990 PF04287 tRNA pseudouridine synthase C HXV88_04995 PF00849 RNA pseudouridylate synthase HXV88_05000 PF00258 Flavodoxin HXV88_05005 PF02264 LamB porin HXV88_05010 PF07148 Maltose operon periplasmic protein precursor (MalM) HXV88_05015 PF02378 Phosphotransferase system, EIIC HXV88_05015 PF00367 phosphotransferase system, EIIB HXV88_05020 PF11944 Protein of unknown function (DUF3461) HXV88_05025 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HXV88_05025 PF14602 Hexapeptide repeat of succinyl-transferase HXV88_05025 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_05030 PF01842 ACT domain HXV88_05030 PF01966 HD domain HXV88_05030 PF01909 Nucleotidyltransferase domain HXV88_05030 PF08335 GlnD PII-uridylyltransferase HXV88_05035 PF00557 Metallopeptidase family M24 HXV88_05040 PF00318 Ribosomal protein S2 HXV88_05045 PF00889 Elongation factor TS HXV88_05050 PF00696 Amino acid kinase family HXV88_05055 PF01765 Ribosome recycling factor HXV88_05060 PF01255 Putative undecaprenyl diphosphate synthase HXV88_05070 PF13288 DXP reductoisomerase C-terminal domain HXV88_05070 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HXV88_05070 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HXV88_05075 PF02163 Peptidase family M50 HXV88_05075 PF17820 PDZ domain HXV88_05080 PF01103 Surface antigen HXV88_05080 PF07244 Surface antigen variable number repeat HXV88_05085 PF03938 Outer membrane protein (OmpH-like) HXV88_05090 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_05090 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HXV88_05095 PF07977 FabA-like domain HXV88_05100 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_05100 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HXV88_05105 PF02684 Lipid-A-disaccharide synthetase HXV88_05110 PF01351 Ribonuclease HII HXV88_05115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HXV88_05115 PF07733 Bacterial DNA polymerase III alpha NTPase domain HXV88_05115 PF02811 PHP domain HXV88_05115 PF14579 Helix-hairpin-helix motif HXV88_05115 PF01336 OB-fold nucleic acid binding domain HXV88_05120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HXV88_05130 PF00923 Transaldolase/Fructose-6-phosphate aldolase HXV88_05135 PF01235 Sodium:alanine symporter family HXV88_05140 PF13559 Domain of unknown function (DUF4129) HXV88_05140 PF11992 Domain of unknown function (DUF3488) HXV88_05140 PF01841 Transglutaminase-like superfamily HXV88_05150 PF07726 ATPase family associated with various cellular activities (AAA) HXV88_05150 PF17863 AAA lid domain HXV88_05155 PF07690 Major Facilitator Superfamily HXV88_05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_05160 PF03466 LysR substrate binding domain HXV88_05165 PF00854 POT family HXV88_05170 PF03652 Holliday junction resolvase HXV88_05175 PF02622 Uncharacterized ACR, COG1678 HXV88_05180 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HXV88_05180 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HXV88_05185 PF04452 RNA methyltransferase HXV88_05190 PF04231 Endonuclease I HXV88_05195 PF10263 SprT-like family HXV88_05195 PF17283 SprT-like zinc ribbon domain HXV88_05200 PF02773 S-adenosylmethionine synthetase, C-terminal domain HXV88_05200 PF02772 S-adenosylmethionine synthetase, central domain HXV88_05200 PF00438 S-adenosylmethionine synthetase, N-terminal domain HXV88_05205 PF02779 Transketolase, pyrimidine binding domain HXV88_05205 PF00456 Transketolase, thiamine diphosphate binding domain HXV88_05205 PF02780 Transketolase, C-terminal domain HXV88_05215 PF01042 Endoribonuclease L-PSP HXV88_05230 PF03702 Anhydro-N-acetylmuramic acid kinase HXV88_05235 PF01551 Peptidase family M23 HXV88_05235 PF01476 LysM domain HXV88_05235 PF08525 Opacity-associated protein A N-terminal motif HXV88_05240 PF00579 tRNA synthetases class I (W and Y) HXV88_05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_05245 PF03466 LysR substrate binding domain HXV88_05250 PF03306 Alpha-acetolactate decarboxylase HXV88_05255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HXV88_05255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HXV88_05255 PF00205 Thiamine pyrophosphate enzyme, central domain HXV88_05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_05265 PF03466 LysR substrate binding domain HXV88_05280 PF12706 Beta-lactamase superfamily domain HXV88_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_05285 PF03466 LysR substrate binding domain HXV88_05290 PF13520 Amino acid permease HXV88_05295 PF18500 CadC C-terminal domain 1 HXV88_05295 PF00486 Transcriptional regulatory protein, C terminal HXV88_05300 PF13520 Amino acid permease HXV88_05305 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HXV88_05305 PF01276 Orn/Lys/Arg decarboxylase, major domain HXV88_05305 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HXV88_05310 PF08543 Phosphomethylpyrimidine kinase HXV88_05320 PF01431 Peptidase family M13 HXV88_05320 PF05649 Peptidase family M13 HXV88_05325 PF11734 TilS substrate C-terminal domain HXV88_05325 PF01171 PP-loop family HXV88_05325 PF09179 TilS substrate binding domain HXV88_05330 PF00990 Diguanylate cyclase, GGDEF domain HXV88_05335 PF02080 TrkA-C domain HXV88_05335 PF02254 TrkA-N domain HXV88_05335 PF00999 Sodium/hydrogen exchanger family HXV88_05355 PF00072 Response regulator receiver domain HXV88_05355 PF00196 Bacterial regulatory proteins, luxR family HXV88_05365 PF00128 Alpha amylase, catalytic domain HXV88_05380 PF00535 Glycosyl transferase family 2 HXV88_05395 PF03734 L,D-transpeptidase catalytic domain HXV88_05395 PF01471 Putative peptidoglycan binding domain HXV88_05400 PF05951 Bacterial protein of unknown function (DUF882) HXV88_05410 PF03458 UPF0126 domain HXV88_05420 PF06470 SMC proteins Flexible Hinge Domain HXV88_05420 PF02463 RecF/RecN/SMC N terminal domain HXV88_05425 PF04354 ZipA, C-terminal FtsZ-binding domain HXV88_05430 PF03120 NAD-dependent DNA ligase OB-fold domain HXV88_05430 PF00533 BRCA1 C Terminus (BRCT) domain HXV88_05430 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HXV88_05430 PF12826 Helix-hairpin-helix motif HXV88_05430 PF01653 NAD-dependent DNA ligase adenylation domain HXV88_05440 PF13597 Anaerobic ribonucleoside-triphosphate reductase HXV88_05440 PF03477 ATP cone domain HXV88_05450 PF01679 Proteolipid membrane potential modulator HXV88_05475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_05475 PF00529 HlyD membrane-fusion protein of T1SS HXV88_05480 PF01047 MarR family HXV88_05485 PF03390 2-hydroxycarboxylate transporter family HXV88_05490 PF00390 Malic enzyme, N-terminal domain HXV88_05490 PF03949 Malic enzyme, NAD binding domain HXV88_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_05495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HXV88_05495 PF00989 PAS fold HXV88_05495 PF17203 Single cache domain 3 HXV88_05500 PF12431 Transcriptional regulator HXV88_05500 PF00072 Response regulator receiver domain HXV88_05505 PF00892 EamA-like transporter family HXV88_05515 PF00072 Response regulator receiver domain HXV88_05515 PF00990 Diguanylate cyclase, GGDEF domain HXV88_05520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HXV88_05525 PF00486 Transcriptional regulatory protein, C terminal HXV88_05525 PF00072 Response regulator receiver domain HXV88_05530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_05530 PF00512 His Kinase A (phospho-acceptor) domain HXV88_05530 PF00989 PAS fold HXV88_05530 PF11808 Phosphate regulon sensor protein PhoR HXV88_05535 PF12849 PBP superfamily domain HXV88_05540 PF01435 Peptidase family M48 HXV88_05550 PF00480 ROK family HXV88_05555 PF03932 CutC family HXV88_05560 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HXV88_05560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HXV88_05575 PF00293 NUDIX domain HXV88_05585 PF08534 Redoxin HXV88_05590 PF01699 Sodium/calcium exchanger protein HXV88_05595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HXV88_05595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HXV88_05600 PF01235 Sodium:alanine symporter family HXV88_05610 PF00860 Permease family HXV88_05615 PF00990 Diguanylate cyclase, GGDEF domain HXV88_05620 PF10692 Protein of unknown function (DUF2498) HXV88_05625 PF01554 MatE HXV88_05630 PF12833 Helix-turn-helix domain HXV88_05635 PF03949 Malic enzyme, NAD binding domain HXV88_05635 PF00390 Malic enzyme, N-terminal domain HXV88_05640 PF01389 OmpA-like transmembrane domain HXV88_05640 PF00691 OmpA family HXV88_05645 PF00691 OmpA family HXV88_05645 PF01389 OmpA-like transmembrane domain HXV88_05650 PF00691 OmpA family HXV88_05650 PF01389 OmpA-like transmembrane domain HXV88_05665 PF13520 Amino acid permease HXV88_05670 PF01734 Patatin-like phospholipase HXV88_05675 PF00990 Diguanylate cyclase, GGDEF domain HXV88_05675 PF17158 Membrane-associated sensor, integral membrane domain HXV88_05680 PF00529 HlyD membrane-fusion protein of T1SS HXV88_05680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_05685 PF00873 AcrB/AcrD/AcrF family HXV88_05690 PF08497 Radical SAM N-terminal HXV88_05690 PF04055 Radical SAM superfamily HXV88_05690 PF11842 Domain of unknown function (DUF3362) HXV88_05720 PF03466 LysR substrate binding domain HXV88_05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_05725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HXV88_05730 PF04358 DsrC like protein HXV88_05735 PF12805 FUSC-like inner membrane protein yccS HXV88_05740 PF01027 Inhibitor of apoptosis-promoting Bax1 HXV88_05755 PF02374 Anion-transporting ATPase HXV88_05755 PF17886 HSP20-like domain found in ArsA HXV88_05770 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HXV88_05840 PF03611 PTS system sugar-specific permease component HXV88_05850 PF01695 IstB-like ATP binding protein HXV88_05865 PF04002 RadC-like JAB domain HXV88_05895 PF02796 Helix-turn-helix domain of resolvase HXV88_05895 PF00239 Resolvase, N terminal domain HXV88_05905 PF13148 Protein of unknown function (DUF3987) HXV88_05910 PF05930 Prophage CP4-57 regulatory protein (AlpA) HXV88_05940 PF03412 Peptidase C39 family HXV88_05940 PF00005 ABC transporter HXV88_05940 PF00664 ABC transporter transmembrane region HXV88_05945 PF13533 Biotin-lipoyl like HXV88_05975 PF02382 N-terminal domain in RTX protein HXV88_05975 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HXV88_05975 PF06594 Haemolysin-type calcium binding protein related domain HXV88_05975 PF03497 Anthrax toxin LF subunit HXV88_05980 PF05638 Type VI secretion system effector, Hcp HXV88_05985 PF04717 Type VI secretion system, phage-baseplate injector HXV88_05995 PF05488 PAAR motif HXV88_05995 PF05593 RHS Repeat HXV88_06010 PF13356 Arm DNA-binding domain HXV88_06010 PF00589 Phage integrase family HXV88_06015 PF08220 DeoR-like helix-turn-helix domain HXV88_06015 PF00455 DeoR C terminal sensor domain HXV88_06020 PF01261 Xylose isomerase-like TIM barrel HXV88_06035 PF03611 PTS system sugar-specific permease component HXV88_06040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HXV88_06045 PF00596 Class II Aldolase and Adducin N-terminal domain HXV88_06050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HXV88_06055 PF01203 Type II secretion system (T2SS), protein N HXV88_06060 PF04612 Type II secretion system (T2SS), protein M HXV88_06065 PF12693 GspL periplasmic domain HXV88_06065 PF05134 Type II secretion system (T2SS), protein L HXV88_06070 PF03934 Type II secretion system (T2SS), protein K HXV88_06075 PF07963 Prokaryotic N-terminal methylation motif HXV88_06075 PF11612 Type II secretion system (T2SS), protein J HXV88_06080 PF07963 Prokaryotic N-terminal methylation motif HXV88_06080 PF02501 Type II secretion system (T2SS), protein I HXV88_06085 PF07963 Prokaryotic N-terminal methylation motif HXV88_06085 PF12019 Type II transport protein GspH HXV88_06090 PF07963 Prokaryotic N-terminal methylation motif HXV88_06090 PF08334 Type II secretion system (T2SS), protein G HXV88_06095 PF00482 Type II secretion system (T2SS), protein F HXV88_06100 PF00437 Type II/IV secretion system protein HXV88_06105 PF03958 Bacterial type II/III secretion system short domain HXV88_06105 PF00263 Bacterial type II and III secretion system protein HXV88_06110 PF11356 Type II secretion system protein C HXV88_06115 PF16537 Type II secretion system protein B HXV88_06120 PF01471 Putative peptidoglycan binding domain HXV88_06120 PF13401 AAA domain HXV88_06125 PF01966 HD domain HXV88_06125 PF00672 HAMP domain HXV88_06130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HXV88_06130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HXV88_06140 PF01434 Peptidase family M41 HXV88_06140 PF00004 ATPase family associated with various cellular activities (AAA) HXV88_06140 PF17862 AAA+ lid domain HXV88_06145 PF00291 Pyridoxal-phosphate dependent enzyme HXV88_06150 PF00381 PTS HPr component phosphorylation site HXV88_06155 PF00391 PEP-utilising enzyme, mobile domain HXV88_06155 PF02896 PEP-utilising enzyme, TIM barrel domain HXV88_06155 PF05524 PEP-utilising enzyme, N-terminal HXV88_06160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HXV88_06165 PF00990 Diguanylate cyclase, GGDEF domain HXV88_06165 PF08448 PAS fold HXV88_06170 PF01431 Peptidase family M13 HXV88_06170 PF05649 Peptidase family M13 HXV88_06180 PF12795 Mechanosensitive ion channel porin domain HXV88_06180 PF12794 Mechanosensitive ion channel inner membrane domain 1 HXV88_06180 PF00924 Mechanosensitive ion channel HXV88_06185 PF00224 Pyruvate kinase, barrel domain HXV88_06185 PF02887 Pyruvate kinase, alpha/beta domain HXV88_06195 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HXV88_06200 PF13476 AAA domain HXV88_06205 PF12320 Type 5 capsule protein repressor C-terminal domain HXV88_06205 PF00149 Calcineurin-like phosphoesterase HXV88_06215 PF04381 Putative exonuclease, RdgC HXV88_06225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HXV88_06225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HXV88_06230 PF02690 Na+/Pi-cotransporter HXV88_06240 PF00324 Amino acid permease HXV88_06250 PF00324 Amino acid permease HXV88_06255 PF00202 Aminotransferase class-III HXV88_06260 PF00171 Aldehyde dehydrogenase family HXV88_06265 PF07883 Cupin domain HXV88_06265 PF01381 Helix-turn-helix HXV88_06270 PF01266 FAD dependent oxidoreductase HXV88_06290 PF03350 Uncharacterized protein family, UPF0114 HXV88_06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_06295 PF08918 PhoQ Sensor HXV88_06300 PF00072 Response regulator receiver domain HXV88_06300 PF00486 Transcriptional regulatory protein, C terminal HXV88_06310 PF01292 Prokaryotic cytochrome b561 HXV88_06315 PF01980 tRNA-methyltransferase O HXV88_06315 PF18389 TrmO C-terminal domain HXV88_06335 PF00005 ABC transporter HXV88_06335 PF00664 ABC transporter transmembrane region HXV88_06340 PF00664 ABC transporter transmembrane region HXV88_06340 PF00005 ABC transporter HXV88_06355 PF00486 Transcriptional regulatory protein, C terminal HXV88_06355 PF00072 Response regulator receiver domain HXV88_06365 PF03737 Aldolase/RraA HXV88_06385 PF06953 Arsenical resistance operon trans-acting repressor ArsD HXV88_06390 PF02374 Anion-transporting ATPase HXV88_06395 PF01758 Sodium Bile acid symporter family HXV88_06400 PF03960 ArsC family HXV88_06405 PF01773 Na+ dependent nucleoside transporter N-terminus HXV88_06405 PF07670 Nucleoside recognition HXV88_06405 PF07662 Na+ dependent nucleoside transporter C-terminus HXV88_06425 PF04307 LexA-binding, inner membrane-associated putative hydrolase HXV88_06445 PF00290 Tryptophan synthase alpha chain HXV88_06450 PF00291 Pyridoxal-phosphate dependent enzyme HXV88_06455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HXV88_06455 PF00218 Indole-3-glycerol phosphate synthase HXV88_06460 PF02885 Glycosyl transferase family, helical bundle domain HXV88_06460 PF00591 Glycosyl transferase family, a/b domain HXV88_06465 PF00591 Glycosyl transferase family, a/b domain HXV88_06465 PF02885 Glycosyl transferase family, helical bundle domain HXV88_06465 PF00117 Glutamine amidotransferase class-I HXV88_06470 PF00425 chorismate binding enzyme HXV88_06470 PF04715 Anthranilate synthase component I, N terminal region HXV88_06475 PF02811 PHP domain HXV88_06480 PF01300 Telomere recombination HXV88_06485 PF02616 Segregation and condensation protein ScpA HXV88_06490 PF04079 Segregation and condensation complex subunit ScpB HXV88_06495 PF01479 S4 domain HXV88_06495 PF00849 RNA pseudouridylate synthase HXV88_06500 PF08479 POTRA domain, ShlB-type HXV88_06500 PF17287 POTRA domain HXV88_06500 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HXV88_06505 PF05594 Haemagluttinin repeat HXV88_06505 PF05860 haemagglutination activity domain HXV88_06505 PF13332 Hemagglutinin repeat HXV88_06505 PF15526 Novel toxin 21 HXV88_06505 PF04829 Pre-toxin domain with VENN motif HXV88_06530 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HXV88_06535 PF00588 SpoU rRNA Methylase family HXV88_06540 PF03447 Homoserine dehydrogenase, NAD binding domain HXV88_06540 PF00742 Homoserine dehydrogenase HXV88_06540 PF00696 Amino acid kinase family HXV88_06540 PF01842 ACT domain HXV88_06540 PF13840 ACT domain HXV88_06545 PF00288 GHMP kinases N terminal domain HXV88_06545 PF08544 GHMP kinases C terminal HXV88_06550 PF14821 Threonine synthase N terminus HXV88_06550 PF00291 Pyridoxal-phosphate dependent enzyme HXV88_06575 PF04055 Radical SAM superfamily HXV88_06575 PF00919 Uncharacterized protein family UPF0004 HXV88_06575 PF18693 TRAM domain HXV88_06580 PF00072 Response regulator receiver domain HXV88_06595 PF02001 Protein of unknown function DUF134 HXV88_06610 PF08361 MAATS-type transcriptional repressor, C-terminal region HXV88_06610 PF00440 Bacterial regulatory proteins, tetR family HXV88_06615 PF00529 HlyD membrane-fusion protein of T1SS HXV88_06615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_06620 PF00873 AcrB/AcrD/AcrF family HXV88_06630 PF02719 Polysaccharide biosynthesis protein HXV88_06635 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HXV88_06640 PF02350 UDP-N-acetylglucosamine 2-epimerase HXV88_06645 PF08666 SAF domain HXV88_06645 PF03102 NeuB family HXV88_06655 PF00483 Nucleotidyl transferase HXV88_06660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HXV88_06660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HXV88_06665 PF02348 Cytidylyltransferase HXV88_06675 PF14602 Hexapeptide repeat of succinyl-transferase HXV88_06675 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_06675 PF12464 Maltose acetyltransferase HXV88_06695 PF00117 Glutamine amidotransferase class-I HXV88_06700 PF00977 Histidine biosynthesis protein HXV88_06705 PF02719 Polysaccharide biosynthesis protein HXV88_06705 PF08485 Polysaccharide biosynthesis protein C-terminal HXV88_06710 PF01370 NAD dependent epimerase/dehydratase family HXV88_06715 PF02350 UDP-N-acetylglucosamine 2-epimerase HXV88_06725 PF01370 NAD dependent epimerase/dehydratase family HXV88_06730 PF02397 Bacterial sugar transferase HXV88_06735 PF02719 Polysaccharide biosynthesis protein HXV88_06740 PF16363 GDP-mannose 4,6 dehydratase HXV88_06745 PF04321 RmlD substrate binding domain HXV88_06750 PF00483 Nucleotidyl transferase HXV88_06755 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HXV88_06760 PF02706 Chain length determinant protein HXV88_06770 PF00816 H-NS histone family HXV88_06775 PF02321 Outer membrane efflux protein HXV88_06780 PF00005 ABC transporter HXV88_06780 PF02687 FtsX-like permease family HXV88_06780 PF12704 MacB-like periplasmic core domain HXV88_06785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_06790 PF01368 DHH family HXV88_06790 PF02833 DHHA2 domain HXV88_06795 PF02463 RecF/RecN/SMC N terminal domain HXV88_06800 PF01513 ATP-NAD kinase HXV88_06805 PF01025 GrpE HXV88_06810 PF00012 Hsp70 protein HXV88_06815 PF00226 DnaJ domain HXV88_06815 PF01556 DnaJ C terminal domain HXV88_06815 PF00684 DnaJ central domain HXV88_06820 PF11471 Maltoporin periplasmic N-terminal extension HXV88_06820 PF02264 LamB porin HXV88_06825 PF00294 pfkB family carbohydrate kinase HXV88_06830 PF00367 phosphotransferase system, EIIB HXV88_06830 PF02378 Phosphotransferase system, EIIC HXV88_06835 PF00251 Glycosyl hydrolases family 32 N-terminal domain HXV88_06835 PF08244 Glycosyl hydrolases family 32 C terminal HXV88_06840 PF00356 Bacterial regulatory proteins, lacI family HXV88_06840 PF13407 Periplasmic binding protein domain HXV88_06845 PF02308 MgtC family HXV88_06855 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_06870 PF04143 Sulphur transport HXV88_06885 PF00873 AcrB/AcrD/AcrF family HXV88_06890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_06890 PF00529 HlyD membrane-fusion protein of T1SS HXV88_06895 PF12704 MacB-like periplasmic core domain HXV88_06895 PF02687 FtsX-like permease family HXV88_06895 PF00005 ABC transporter HXV88_06900 PF12704 MacB-like periplasmic core domain HXV88_06900 PF00005 ABC transporter HXV88_06900 PF02687 FtsX-like permease family HXV88_06905 PF12704 MacB-like periplasmic core domain HXV88_06905 PF02687 FtsX-like permease family HXV88_06905 PF00005 ABC transporter HXV88_06910 PF00563 EAL domain HXV88_06910 PF00990 Diguanylate cyclase, GGDEF domain HXV88_06910 PF03707 Bacterial signalling protein N terminal repeat HXV88_06915 PF03099 Biotin/lipoate A/B protein ligase family HXV88_06915 PF10437 Bacterial lipoate protein ligase C-terminus HXV88_06925 PF13460 NAD(P)H-binding HXV88_06930 PF04355 SmpA / OmlA family HXV88_06935 PF00465 Iron-containing alcohol dehydrogenase HXV88_06940 PF01048 Phosphorylase superfamily HXV88_06945 PF00849 RNA pseudouridylate synthase HXV88_06950 PF01156 Inosine-uridine preferring nucleoside hydrolase HXV88_06965 PF07509 Protein of unknown function (DUF1523) HXV88_06970 PF12729 Four helix bundle sensory module for signal transduction HXV88_06970 PF00672 HAMP domain HXV88_06970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_06975 PF01810 LysE type translocator HXV88_06990 PF03471 Transporter associated domain HXV88_06990 PF00999 Sodium/hydrogen exchanger family HXV88_06990 PF02080 TrkA-C domain HXV88_07000 PF02557 D-alanyl-D-alanine carboxypeptidase HXV88_07005 PF01546 Peptidase family M20/M25/M40 HXV88_07005 PF07687 Peptidase dimerisation domain HXV88_07010 PF03960 ArsC family HXV88_07015 PF00239 Resolvase, N terminal domain HXV88_07015 PF13408 Recombinase zinc beta ribbon domain HXV88_07015 PF07508 Recombinase HXV88_07025 PF04002 RadC-like JAB domain HXV88_07045 PF00239 Resolvase, N terminal domain HXV88_07045 PF02796 Helix-turn-helix domain of resolvase HXV88_07075 PF03606 C4-dicarboxylate anaerobic carrier HXV88_07080 PF07687 Peptidase dimerisation domain HXV88_07080 PF01546 Peptidase family M20/M25/M40 HXV88_07090 PF03605 Anaerobic c4-dicarboxylate membrane transporter HXV88_07100 PF01336 OB-fold nucleic acid binding domain HXV88_07100 PF00152 tRNA synthetases class II (D, K and N) HXV88_07115 PF00202 Aminotransferase class-III HXV88_07120 PF04055 Radical SAM superfamily HXV88_07120 PF06968 Biotin and Thiamin Synthesis associated domain HXV88_07125 PF00155 Aminotransferase class I and II HXV88_07130 PF08241 Methyltransferase domain HXV88_07140 PF01435 Peptidase family M48 HXV88_07145 PF13426 PAS domain HXV88_07145 PF08447 PAS fold HXV88_07145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_07150 PF03473 MOSC domain HXV88_07150 PF03476 MOSC N-terminal beta barrel domain HXV88_07150 PF00111 2Fe-2S iron-sulfur cluster binding domain HXV88_07150 PF03473 MOSC domain HXV88_07150 PF03476 MOSC N-terminal beta barrel domain HXV88_07150 PF00111 2Fe-2S iron-sulfur cluster binding domain HXV88_07160 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_07160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HXV88_07160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HXV88_07165 PF10371 Domain of unknown function HXV88_07165 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HXV88_07165 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HXV88_07165 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HXV88_07165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HXV88_07175 PF01370 NAD dependent epimerase/dehydratase family HXV88_07180 PF03061 Thioesterase superfamily HXV88_07190 PF03372 Endonuclease/Exonuclease/phosphatase family HXV88_07195 PF00462 Glutaredoxin HXV88_07200 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HXV88_07205 PF04851 Type III restriction enzyme, res subunit HXV88_07205 PF00271 Helicase conserved C-terminal domain HXV88_07210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_07210 PF00529 HlyD membrane-fusion protein of T1SS HXV88_07215 PF11742 Protein of unknown function (DUF3302) HXV88_07220 PF02554 Carbon starvation protein CstA HXV88_07225 PF04397 LytTr DNA-binding domain HXV88_07225 PF00072 Response regulator receiver domain HXV88_07230 PF07694 5TMR of 5TMR-LYT HXV88_07230 PF06580 Histidine kinase HXV88_07235 PF01966 HD domain HXV88_07240 PF00884 Sulfatase HXV88_07240 PF08019 Phosphoethanolamine transferase EptA/EptB HXV88_07245 PF01047 MarR family HXV88_07245 PF00480 ROK family HXV88_07250 PF01979 Amidohydrolase family HXV88_07255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HXV88_07260 PF00367 phosphotransferase system, EIIB HXV88_07260 PF02378 Phosphotransferase system, EIIC HXV88_07260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HXV88_07265 PF02838 Glycosyl hydrolase family 20, domain 2 HXV88_07265 PF00728 Glycosyl hydrolase family 20, catalytic domain HXV88_07265 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HXV88_07265 PF03173 Putative carbohydrate binding domain HXV88_07270 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HXV88_07270 PF00749 tRNA synthetases class I (E and Q), catalytic domain HXV88_07275 PF01475 Ferric uptake regulator family HXV88_07285 PF00258 Flavodoxin HXV88_07290 PF01402 Ribbon-helix-helix protein, copG family HXV88_07300 PF12697 Alpha/beta hydrolase family HXV88_07305 PF03925 SeqA protein C-terminal domain HXV88_07305 PF17206 SeqA protein N-terminal domain HXV88_07310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HXV88_07310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HXV88_07310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HXV88_07310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HXV88_07325 PF13406 Transglycosylase SLT domain HXV88_07330 PF01066 CDP-alcohol phosphatidyltransferase HXV88_07335 PF00005 ABC transporter HXV88_07345 PF13416 Bacterial extracellular solute-binding protein HXV88_07350 PF00403 Heavy-metal-associated domain HXV88_07350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HXV88_07350 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_07355 PF02627 Carboxymuconolactone decarboxylase family HXV88_07375 PF01103 Surface antigen HXV88_07375 PF07244 Surface antigen variable number repeat HXV88_07375 PF17243 POTRA domain TamA domain 1 HXV88_07380 PF04357 TamB, inner membrane protein subunit of TAM complex HXV88_07400 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HXV88_07405 PF03707 Bacterial signalling protein N terminal repeat HXV88_07405 PF00563 EAL domain HXV88_07405 PF00990 Diguanylate cyclase, GGDEF domain HXV88_07410 PF14718 Soluble lytic murein transglycosylase L domain HXV88_07410 PF01464 Transglycosylase SLT domain HXV88_07415 PF00356 Bacterial regulatory proteins, lacI family HXV88_07420 PF00793 DAHP synthetase I family HXV88_07425 PF00593 TonB dependent receptor HXV88_07425 PF07715 TonB-dependent Receptor Plug Domain HXV88_07430 PF00425 chorismate binding enzyme HXV88_07435 PF13193 AMP-binding enzyme C-terminal domain HXV88_07435 PF00501 AMP-binding enzyme HXV88_07440 PF00857 Isochorismatase family HXV88_07440 PF00550 Phosphopantetheine attachment site HXV88_07450 PF00975 Thioesterase domain HXV88_07450 PF00501 AMP-binding enzyme HXV88_07450 PF00550 Phosphopantetheine attachment site HXV88_07450 PF00668 Condensation domain HXV88_07460 PF00676 Dehydrogenase E1 component HXV88_07465 PF02780 Transketolase, C-terminal domain HXV88_07465 PF02779 Transketolase, pyrimidine binding domain HXV88_07470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HXV88_07470 PF02817 e3 binding domain HXV88_07470 PF00364 Biotin-requiring enzyme HXV88_07475 PF00313 'Cold-shock' DNA-binding domain HXV88_07500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_07505 PF00455 DeoR C terminal sensor domain HXV88_07505 PF08220 DeoR-like helix-turn-helix domain HXV88_07510 PF01228 Glycine radical HXV88_07510 PF02901 Pyruvate formate lyase-like HXV88_07515 PF04055 Radical SAM superfamily HXV88_07520 PF00923 Transaldolase/Fructose-6-phosphate aldolase HXV88_07530 PF01966 HD domain HXV88_07535 PF01479 S4 domain HXV88_07535 PF00849 RNA pseudouridylate synthase HXV88_07545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_07550 PF12850 Calcineurin-like phosphoesterase superfamily domain HXV88_07565 PF13144 Chaperone for flagella basal body P-ring formation HXV88_07570 PF00072 Response regulator receiver domain HXV88_07570 PF01584 CheW-like domain HXV88_07575 PF03705 CheR methyltransferase, all-alpha domain HXV88_07575 PF01739 CheR methyltransferase, SAM binding domain HXV88_07580 PF00460 Flagella basal body rod protein HXV88_07585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_07585 PF00460 Flagella basal body rod protein HXV88_07595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_07595 PF07559 Flagellar basal body protein FlaE HXV88_07595 PF00460 Flagella basal body rod protein HXV88_07600 PF00460 Flagella basal body rod protein HXV88_07600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_07605 PF00460 Flagella basal body rod protein HXV88_07605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_07610 PF02107 Flagellar L-ring protein HXV88_07615 PF02119 Flagellar P-ring protein HXV88_07620 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HXV88_07620 PF10135 Rod binding protein HXV88_07625 PF07196 Flagellin hook IN motif HXV88_07625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HXV88_07630 PF00669 Bacterial flagellin N-terminal helical region HXV88_07635 PF03448 MgtE intracellular N domain HXV88_07635 PF01769 Divalent cation transporter HXV88_07635 PF00571 CBS domain HXV88_07640 PF02541 Ppx/GppA phosphatase family HXV88_07645 PF13089 Polyphosphate kinase N-terminal domain HXV88_07645 PF13090 Polyphosphate kinase C-terminal domain 2 HXV88_07645 PF02503 Polyphosphate kinase middle domain HXV88_07645 PF17941 Polyphosphate kinase C-terminal domain 1 HXV88_07650 PF01842 ACT domain HXV88_07660 PF02954 Bacterial regulatory protein, Fis family HXV88_07660 PF00158 Sigma-54 interaction domain HXV88_07660 PF06490 Flagellar regulatory protein FleQ HXV88_07665 PF00512 His Kinase A (phospho-acceptor) domain HXV88_07665 PF00989 PAS fold HXV88_07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_07670 PF00072 Response regulator receiver domain HXV88_07670 PF02954 Bacterial regulatory protein, Fis family HXV88_07670 PF00158 Sigma-54 interaction domain HXV88_07675 PF01784 NIF3 (NGG1p interacting factor 3) HXV88_07680 PF00551 Formyl transferase HXV88_07685 PF00586 AIR synthase related protein, N-terminal domain HXV88_07685 PF02769 AIR synthase related protein, C-terminal domain HXV88_07700 PF00308 Bacterial dnaA protein HXV88_07705 PF00463 Isocitrate lyase family HXV88_07710 PF01274 Malate synthase HXV88_07725 PF14437 MafB19-like deaminase HXV88_07730 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_07735 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_07745 PF01895 PhoU domain HXV88_07750 PF00571 CBS domain HXV88_07750 PF03471 Transporter associated domain HXV88_07750 PF01595 Cyclin M transmembrane N-terminal domain HXV88_07760 PF00809 Pterin binding enzyme HXV88_07760 PF02607 B12 binding domain HXV88_07760 PF02574 Homocysteine S-methyltransferase HXV88_07760 PF02310 B12 binding domain HXV88_07760 PF02965 Vitamin B12 dependent methionine synthase, activation domain HXV88_07765 PF13520 Amino acid permease HXV88_07770 PF04116 Fatty acid hydroxylase superfamily HXV88_07780 PF00005 ABC transporter HXV88_07785 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_07790 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_07795 PF00990 Diguanylate cyclase, GGDEF domain HXV88_07800 PF07690 Major Facilitator Superfamily HXV88_07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_07805 PF05231 MASE1 HXV88_07805 PF07730 Histidine kinase HXV88_07810 PF00196 Bacterial regulatory proteins, luxR family HXV88_07810 PF00072 Response regulator receiver domain HXV88_07815 PF01272 Transcription elongation factor, GreA/GreB, C-term HXV88_07815 PF14760 Rnk N-terminus HXV88_07830 PF00245 Alkaline phosphatase HXV88_07835 PF00245 Alkaline phosphatase HXV88_07840 PF01926 50S ribosome-binding GTPase HXV88_07845 PF00850 Histone deacetylase domain HXV88_07855 PF06733 DEAD_2 HXV88_07855 PF13307 Helicase C-terminal domain HXV88_07870 PF01817 Chorismate mutase type II HXV88_07870 PF02153 Prephenate dehydrogenase HXV88_07875 PF00793 DAHP synthetase I family HXV88_07880 PF00483 Nucleotidyl transferase HXV88_07885 PF07549 SecD/SecF GG Motif HXV88_07885 PF02355 Protein export membrane protein HXV88_07890 PF02355 Protein export membrane protein HXV88_07890 PF07549 SecD/SecF GG Motif HXV88_07890 PF13721 SecD export protein N-terminal TM region HXV88_07925 PF01230 HIT domain HXV88_07930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_07930 PF00672 HAMP domain HXV88_07940 PF01979 Amidohydrolase family HXV88_07955 PF00375 Sodium:dicarboxylate symporter family HXV88_07960 PF13426 PAS domain HXV88_07960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_07960 PF08447 PAS fold HXV88_07975 PF05661 Protein of unknown function (DUF808) HXV88_07980 PF01432 Peptidase family M3 HXV88_07980 PF08439 Oligopeptidase F HXV88_07985 PF00860 Permease family HXV88_07990 PF05728 Uncharacterised protein family (UPF0227) HXV88_07995 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_08005 PF04055 Radical SAM superfamily HXV88_08010 PF03707 Bacterial signalling protein N terminal repeat HXV88_08010 PF00990 Diguanylate cyclase, GGDEF domain HXV88_08010 PF00563 EAL domain HXV88_08015 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_08015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HXV88_08025 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HXV88_08025 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HXV88_08025 PF01835 MG2 domain HXV88_08025 PF17962 Bacterial macroglobulin domain 6 HXV88_08025 PF07703 Alpha-2-macroglobulin bait region domain HXV88_08025 PF07678 A-macroglobulin TED domain HXV88_08025 PF00207 Alpha-2-macroglobulin family HXV88_08025 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HXV88_08025 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HXV88_08030 PF00912 Transglycosylase HXV88_08030 PF06832 Penicillin-Binding Protein C-terminus Family HXV88_08030 PF00905 Penicillin binding protein transpeptidase domain HXV88_08040 PF02926 THUMP domain HXV88_08040 PF02568 Thiamine biosynthesis protein (ThiI) HXV88_08050 PF03458 UPF0126 domain HXV88_08055 PF00700 Bacterial flagellin C-terminal helical region HXV88_08055 PF00669 Bacterial flagellin N-terminal helical region HXV88_08060 PF07196 Flagellin hook IN motif HXV88_08060 PF00700 Bacterial flagellin C-terminal helical region HXV88_08060 PF00669 Bacterial flagellin N-terminal helical region HXV88_08065 PF00669 Bacterial flagellin N-terminal helical region HXV88_08065 PF00700 Bacterial flagellin C-terminal helical region HXV88_08075 PF07196 Flagellin hook IN motif HXV88_08075 PF07195 Flagellar hook-associated protein 2 C-terminus HXV88_08075 PF02465 Flagellar hook-associated protein 2 N-terminus HXV88_08080 PF02561 Flagellar protein FliS HXV88_08105 PF08889 WbqC-like protein family HXV88_08110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HXV88_08120 PF08666 SAF domain HXV88_08120 PF03102 NeuB family HXV88_08130 PF02585 GlcNAc-PI de-N-acetylase HXV88_08135 PF02348 Cytidylyltransferase HXV88_08140 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HXV88_08145 PF02719 Polysaccharide biosynthesis protein HXV88_08150 PF01497 Periplasmic binding protein HXV88_08160 PF01048 Phosphorylase superfamily HXV88_08165 PF02535 ZIP Zinc transporter HXV88_08170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_08170 PF00672 HAMP domain HXV88_08175 PF00459 Inositol monophosphatase family HXV88_08185 PF02798 Glutathione S-transferase, N-terminal domain HXV88_08185 PF00043 Glutathione S-transferase, C-terminal domain HXV88_08190 PF07690 Major Facilitator Superfamily HXV88_08195 PF03466 LysR substrate binding domain HXV88_08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_08200 PF02634 FdhD/NarQ family HXV88_08205 PF00384 Molybdopterin oxidoreductase HXV88_08215 PF05164 Cell division protein ZapA HXV88_08220 PF03695 Uncharacterised protein family (UPF0149) HXV88_08225 PF01494 FAD binding domain HXV88_08230 PF01494 FAD binding domain HXV88_08235 PF08669 Glycine cleavage T-protein C-terminal barrel domain HXV88_08235 PF01571 Aminomethyltransferase folate-binding domain HXV88_08240 PF01597 Glycine cleavage H-protein HXV88_08245 PF02347 Glycine cleavage system P-protein HXV88_08250 PF08447 PAS fold HXV88_08250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_08260 PF00733 Asparagine synthase HXV88_08260 PF13537 Glutamine amidotransferase domain HXV88_08270 PF00999 Sodium/hydrogen exchanger family HXV88_08270 PF02254 TrkA-N domain HXV88_08275 PF13344 Haloacid dehalogenase-like hydrolase HXV88_08280 PF00962 Adenosine/AMP deaminase HXV88_08285 PF00107 Zinc-binding dehydrogenase HXV88_08285 PF08240 Alcohol dehydrogenase GroES-like domain HXV88_08290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HXV88_08295 PF03741 Integral membrane protein TerC family HXV88_08295 PF03471 Transporter associated domain HXV88_08305 PF01565 FAD binding domain HXV88_08305 PF13183 4Fe-4S dicluster domain HXV88_08305 PF02913 FAD linked oxidases, C-terminal domain HXV88_08315 PF03061 Thioesterase superfamily HXV88_08320 PF03880 DbpA RNA binding domain HXV88_08320 PF00270 DEAD/DEAH box helicase HXV88_08320 PF00271 Helicase conserved C-terminal domain HXV88_08330 PF00563 EAL domain HXV88_08330 PF00990 Diguanylate cyclase, GGDEF domain HXV88_08330 PF03707 Bacterial signalling protein N terminal repeat HXV88_08330 PF13188 PAS domain HXV88_08335 PF03553 Na+/H+ antiporter family HXV88_08335 PF13726 Na+-H+ antiporter family HXV88_08340 PF00929 Exonuclease HXV88_08345 PF01569 PAP2 superfamily HXV88_08350 PF11890 Domain of unknown function (DUF3410) HXV88_08350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HXV88_08350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HXV88_08355 PF02774 Semialdehyde dehydrogenase, dimerisation domain HXV88_08355 PF01118 Semialdehyde dehydrogenase, NAD binding domain HXV88_08365 PF01416 tRNA pseudouridine synthase HXV88_08370 PF17848 Acetyl-coA carboxylase zinc finger domain HXV88_08370 PF01039 Carboxyl transferase domain HXV88_08375 PF02875 Mur ligase family, glutamate ligase domain HXV88_08375 PF08245 Mur ligase middle domain HXV88_08380 PF05036 Sporulation related domain HXV88_08385 PF01906 Putative heavy-metal-binding HXV88_08395 PF10414 Sirohaem synthase dimerisation region HXV88_08395 PF14824 Sirohaem biosynthesis protein central HXV88_08395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HXV88_08400 PF13187 4Fe-4S dicluster domain HXV88_08400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HXV88_08400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HXV88_08405 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HXV88_08405 PF00175 Oxidoreductase NAD-binding domain HXV88_08410 PF17179 4Fe-4S dicluster domain HXV88_08415 PF01734 Patatin-like phospholipase HXV88_08420 PF17676 LD-carboxypeptidase C-terminal domain HXV88_08420 PF02016 LD-carboxypeptidase N-terminal domain HXV88_08425 PF00884 Sulfatase HXV88_08435 PF00696 Amino acid kinase family HXV88_08435 PF01842 ACT domain HXV88_08440 PF00583 Acetyltransferase (GNAT) family HXV88_08440 PF00696 Amino acid kinase family HXV88_08445 PF01625 Peptide methionine sulfoxide reductase HXV88_08610 PF07669 Eco57I restriction-modification methylase HXV88_08625 PF00561 alpha/beta hydrolase fold HXV88_08645 PF00005 ABC transporter HXV88_08655 PF03600 Citrate transporter HXV88_08660 PF07690 Major Facilitator Superfamily HXV88_08675 PF01593 Flavin containing amine oxidoreductase HXV88_08680 PF03239 Iron permease FTR1 family HXV88_08695 PF03350 Uncharacterized protein family, UPF0114 HXV88_08700 PF00270 DEAD/DEAH box helicase HXV88_08700 PF00271 Helicase conserved C-terminal domain HXV88_08720 PF05598 Transposase domain (DUF772) HXV88_08720 PF01609 Transposase DDE domain HXV88_08725 PF12729 Four helix bundle sensory module for signal transduction HXV88_08725 PF00672 HAMP domain HXV88_08725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_08735 PF05154 TM2 domain HXV88_08745 PF14659 Phage integrase, N-terminal SAM-like domain HXV88_08745 PF00589 Phage integrase family HXV88_08745 PF13356 Arm DNA-binding domain HXV88_08810 PF00916 Sulfate permease family HXV88_08810 PF01740 STAS domain HXV88_08865 PF10431 C-terminal, D2-small domain, of ClpB protein HXV88_08865 PF17871 AAA lid domain HXV88_08865 PF07724 AAA domain (Cdc48 subfamily) HXV88_08865 PF00004 ATPase family associated with various cellular activities (AAA) HXV88_08870 PF02830 V4R domain HXV88_08870 PF00158 Sigma-54 interaction domain HXV88_08870 PF02954 Bacterial regulatory protein, Fis family HXV88_08870 PF06505 Activator of aromatic catabolism HXV88_08900 PF04717 Type VI secretion system, phage-baseplate injector HXV88_08910 PF05593 RHS Repeat HXV88_08910 PF03527 RHS protein HXV88_08935 PF02132 RecR protein HXV88_08935 PF13662 Toprim domain HXV88_08940 PF00183 Hsp90 protein HXV88_08940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_08945 PF00005 ABC transporter HXV88_08950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_08950 PF00005 ABC transporter HXV88_08955 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_08955 PF12911 N-terminal TM domain of oligopeptide transport permease C HXV88_08960 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_08965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_08970 PF02954 Bacterial regulatory protein, Fis family HXV88_08970 PF00158 Sigma-54 interaction domain HXV88_08975 PF04012 PspA/IM30 family HXV88_08980 PF06667 Phage shock protein B HXV88_08990 PF04317 YcjX-like family, DUF463 HXV88_08995 PF05128 Domain of unknown function (DUF697) HXV88_09000 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HXV88_09005 PF01329 Pterin 4 alpha carbinolamine dehydratase HXV88_09015 PF00158 Sigma-54 interaction domain HXV88_09015 PF18024 Helix-turn-helix domain HXV88_09025 PF17152 Periplasmic sensor domain HXV88_09025 PF00990 Diguanylate cyclase, GGDEF domain HXV88_09030 PF00691 OmpA family HXV88_09035 PF03741 Integral membrane protein TerC family HXV88_09045 PF08891 YfcL protein HXV88_09050 PF00501 AMP-binding enzyme HXV88_09055 PF01053 Cys/Met metabolism PLP-dependent enzyme HXV88_09065 PF13460 NAD(P)H-binding HXV88_09070 PF03466 LysR substrate binding domain HXV88_09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_09075 PF03466 LysR substrate binding domain HXV88_09080 PF07690 Major Facilitator Superfamily HXV88_09085 PF05726 Pirin C-terminal cupin domain HXV88_09085 PF02678 Pirin HXV88_09090 PF00857 Isochorismatase family HXV88_09095 PF03466 LysR substrate binding domain HXV88_09095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_09100 PF03466 LysR substrate binding domain HXV88_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_09105 PF01717 Cobalamin-independent synthase, Catalytic domain HXV88_09105 PF08267 Cobalamin-independent synthase, N-terminal domain HXV88_09115 PF03466 LysR substrate binding domain HXV88_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_09120 PF00232 Glycosyl hydrolase family 1 HXV88_09125 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HXV88_09125 PF18381 YcaO cyclodehydratase C-terminal domain HXV88_09130 PF01226 Formate/nitrite transporter HXV88_09135 PF01228 Glycine radical HXV88_09135 PF02901 Pyruvate formate lyase-like HXV88_09140 PF03692 Putative zinc- or iron-chelating domain HXV88_09160 PF00343 Carbohydrate phosphorylase HXV88_09165 PF00939 Sodium:sulfate symporter transmembrane region HXV88_09170 PF00085 Thioredoxin HXV88_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_09175 PF01627 Hpt domain HXV88_09175 PF00672 HAMP domain HXV88_09175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HXV88_09175 PF00512 His Kinase A (phospho-acceptor) domain HXV88_09175 PF00072 Response regulator receiver domain HXV88_09180 PF00664 ABC transporter transmembrane region HXV88_09180 PF00005 ABC transporter HXV88_09185 PF00005 ABC transporter HXV88_09185 PF00664 ABC transporter transmembrane region HXV88_09210 PF08543 Phosphomethylpyrimidine kinase HXV88_09215 PF00465 Iron-containing alcohol dehydrogenase HXV88_09220 PF13673 Acetyltransferase (GNAT) domain HXV88_09230 PF01928 CYTH domain HXV88_09240 PF13673 Acetyltransferase (GNAT) domain HXV88_09250 PF00285 Citrate synthase, C-terminal domain HXV88_09260 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HXV88_09265 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HXV88_09270 PF00890 FAD binding domain HXV88_09270 PF02910 Fumarate reductase flavoprotein C-term HXV88_09275 PF13085 2Fe-2S iron-sulfur cluster binding domain HXV88_09280 PF16870 2-oxoglutarate dehydrogenase C-terminal HXV88_09280 PF02779 Transketolase, pyrimidine binding domain HXV88_09280 PF00676 Dehydrogenase E1 component HXV88_09280 PF16078 2-oxoglutarate dehydrogenase N-terminus HXV88_09285 PF00364 Biotin-requiring enzyme HXV88_09285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HXV88_09285 PF02817 e3 binding domain HXV88_09290 PF00549 CoA-ligase HXV88_09290 PF08442 ATP-grasp domain HXV88_09295 PF00549 CoA-ligase HXV88_09295 PF02629 CoA binding domain HXV88_09305 PF01266 FAD dependent oxidoreductase HXV88_09310 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_09315 PF00005 ABC transporter HXV88_09325 PF07702 UTRA domain HXV88_09325 PF00392 Bacterial regulatory proteins, gntR family HXV88_09330 PF00266 Aminotransferase class-V HXV88_09335 PF00202 Aminotransferase class-III HXV88_09355 PF03918 Cytochrome C biogenesis protein HXV88_09360 PF08534 Redoxin HXV88_09365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HXV88_09365 PF01578 Cytochrome C assembly protein HXV88_09370 PF03916 Polysulphide reductase, NrfD HXV88_09375 PF00037 4Fe-4S binding domain HXV88_09375 PF13247 4Fe-4S dicluster domain HXV88_09380 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) HXV88_09380 PF13435 Cytochrome c554 and c-prime HXV88_09385 PF02335 Cytochrome c552 HXV88_09395 PF13183 4Fe-4S dicluster domain HXV88_09395 PF02754 Cysteine-rich domain HXV88_09400 PF00890 FAD binding domain HXV88_09405 PF04324 BFD-like [2Fe-2S] binding domain HXV88_09405 PF01266 FAD dependent oxidoreductase HXV88_09410 PF02810 SEC-C motif HXV88_09415 PF17200 Single Cache domain 2 HXV88_09415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_09415 PF00672 HAMP domain HXV88_09420 PF01047 MarR family HXV88_09420 PF00480 ROK family HXV88_09430 PF01925 Sulfite exporter TauE/SafE HXV88_09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_09435 PF03466 LysR substrate binding domain HXV88_09445 PF14525 AraC-binding-like domain HXV88_09445 PF12833 Helix-turn-helix domain HXV88_09450 PF11398 Protein of unknown function (DUF2813) HXV88_09460 PF00128 Alpha amylase, catalytic domain HXV88_09460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HXV88_09500 PF02789 Cytosol aminopeptidase family, N-terminal domain HXV88_09500 PF00883 Cytosol aminopeptidase family, catalytic domain HXV88_09505 PF13419 Haloacid dehalogenase-like hydrolase HXV88_09520 PF01207 Dihydrouridine synthase (Dus) HXV88_09525 PF04304 Protein of unknown function (DUF454) HXV88_09530 PF00156 Phosphoribosyl transferase domain HXV88_09535 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HXV88_09535 PF12169 DNA polymerase III subunits gamma and tau domain III HXV88_09535 PF12170 DNA polymerase III tau subunit V interacting with alpha HXV88_09540 PF02575 YbaB/EbfC DNA-binding family HXV88_09545 PF01261 Xylose isomerase-like TIM barrel HXV88_09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_09550 PF03466 LysR substrate binding domain HXV88_09560 PF03279 Bacterial lipid A biosynthesis acyltransferase HXV88_09565 PF03279 Bacterial lipid A biosynthesis acyltransferase HXV88_09580 PF00990 Diguanylate cyclase, GGDEF domain HXV88_09590 PF03104 DNA polymerase family B, exonuclease domain HXV88_09590 PF00136 DNA polymerase family B HXV88_09605 PF01863 Protein of unknown function DUF45 HXV88_09620 PF03606 C4-dicarboxylate anaerobic carrier HXV88_09635 PF01266 FAD dependent oxidoreductase HXV88_09635 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HXV88_09640 PF02801 Beta-ketoacyl synthase, C-terminal domain HXV88_09640 PF00109 Beta-ketoacyl synthase, N-terminal domain HXV88_09645 PF06826 Predicted Permease Membrane Region HXV88_09645 PF02080 TrkA-C domain HXV88_09660 PF02151 UvrB/uvrC motif HXV88_09660 PF00271 Helicase conserved C-terminal domain HXV88_09660 PF04851 Type III restriction enzyme, res subunit HXV88_09660 PF17757 UvrB interaction domain HXV88_09660 PF12344 Ultra-violet resistance protein B HXV88_09670 PF09335 SNARE associated Golgi protein HXV88_09675 PF02600 Disulfide bond formation protein DsbB HXV88_09680 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HXV88_09685 PF00392 Bacterial regulatory proteins, gntR family HXV88_09685 PF07840 FadR C-terminal domain HXV88_09695 PF07152 YaeQ protein HXV88_09740 PF01554 MatE HXV88_09745 PF06786 Uncharacterised protein family (UPF0253) HXV88_09750 PF00677 Lumazine binding domain HXV88_09760 PF13419 Haloacid dehalogenase-like hydrolase HXV88_09765 PF01370 NAD dependent epimerase/dehydratase family HXV88_09765 PF02222 ATP-grasp domain HXV88_09770 PF00892 EamA-like transporter family HXV88_09775 PF02525 Flavodoxin-like fold HXV88_09800 PF13509 S1 domain HXV88_09800 PF17783 CvfB-like winged helix domain HXV88_09810 PF04269 Protein of unknown function, DUF440 HXV88_09815 PF00912 Transglycosylase HXV88_09820 PF04269 Protein of unknown function, DUF440 HXV88_09825 PF03776 Septum formation topological specificity factor MinE HXV88_09830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HXV88_09835 PF03775 Septum formation inhibitor MinC, C-terminal domain HXV88_09835 PF05209 Septum formation inhibitor MinC, N-terminal domain HXV88_09840 PF05166 YcgL domain HXV88_09845 PF03315 Serine dehydratase beta chain HXV88_09845 PF03313 Serine dehydratase alpha chain HXV88_09850 PF03313 Serine dehydratase alpha chain HXV88_09850 PF03315 Serine dehydratase beta chain HXV88_09855 PF06865 Pyrimidine/purine nucleoside phosphorylase HXV88_09860 PF00375 Sodium:dicarboxylate symporter family HXV88_09865 PF00365 Phosphofructokinase HXV88_09870 PF00121 Triosephosphate isomerase HXV88_09875 PF02698 DUF218 domain HXV88_09880 PF13847 Methyltransferase domain HXV88_09885 PF03882 MukF winged-helix domain HXV88_09885 PF17193 MukF C-terminal domain HXV88_09885 PF17192 MukF middle domain HXV88_09890 PF04288 MukE-like family HXV88_09895 PF16330 MukB hinge domain HXV88_09895 PF04310 MukB N-terminal HXV88_09900 PF03330 Lytic transglycolase HXV88_09915 PF01327 Polypeptide deformylase HXV88_09945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HXV88_09945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HXV88_09950 PF00291 Pyridoxal-phosphate dependent enzyme HXV88_09955 PF07687 Peptidase dimerisation domain HXV88_09955 PF01546 Peptidase family M20/M25/M40 HXV88_09960 PF01979 Amidohydrolase family HXV88_09965 PF00696 Amino acid kinase family HXV88_09970 PF07690 Major Facilitator Superfamily HXV88_09975 PF00005 ABC transporter HXV88_09980 PF01032 FecCD transport family HXV88_09990 PF00892 EamA-like transporter family HXV88_09995 PF01699 Sodium/calcium exchanger protein HXV88_10000 PF02625 XdhC and CoxI family HXV88_10000 PF13478 XdhC Rossmann domain HXV88_10010 PF12804 MobA-like NTP transferase domain HXV88_10015 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_10015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HXV88_10020 PF01979 Amidohydrolase family HXV88_10025 PF00941 FAD binding domain in molybdopterin dehydrogenase HXV88_10030 PF01799 [2Fe-2S] binding domain HXV88_10030 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HXV88_10030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HXV88_10035 PF00860 Permease family HXV88_10040 PF01979 Amidohydrolase family HXV88_10045 PF00860 Permease family HXV88_10050 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HXV88_10050 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HXV88_10055 PF00941 FAD binding domain in molybdopterin dehydrogenase HXV88_10055 PF03450 CO dehydrogenase flavoprotein C-terminal domain HXV88_10060 PF00111 2Fe-2S iron-sulfur cluster binding domain HXV88_10060 PF01799 [2Fe-2S] binding domain HXV88_10065 PF05433 Glycine zipper 2TM domain HXV88_10080 PF13193 AMP-binding enzyme C-terminal domain HXV88_10080 PF00501 AMP-binding enzyme HXV88_10085 PF00990 Diguanylate cyclase, GGDEF domain HXV88_10085 PF07694 5TMR of 5TMR-LYT HXV88_10095 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HXV88_10095 PF01502 Phosphoribosyl-AMP cyclohydrolase HXV88_10100 PF00977 Histidine biosynthesis protein HXV88_10105 PF00977 Histidine biosynthesis protein HXV88_10110 PF00117 Glutamine amidotransferase class-I HXV88_10115 PF08645 Polynucleotide kinase 3 phosphatase HXV88_10115 PF00475 Imidazoleglycerol-phosphate dehydratase HXV88_10120 PF00155 Aminotransferase class I and II HXV88_10125 PF00815 Histidinol dehydrogenase HXV88_10130 PF01634 ATP phosphoribosyltransferase HXV88_10130 PF08029 HisG, C-terminal domain HXV88_10140 PF04851 Type III restriction enzyme, res subunit HXV88_10140 PF13307 Helicase C-terminal domain HXV88_10145 PF00814 Glycoprotease family HXV88_10155 PF12697 Alpha/beta hydrolase family HXV88_10160 PF00501 AMP-binding enzyme HXV88_10160 PF13193 AMP-binding enzyme C-terminal domain HXV88_10165 PF00570 HRDC domain HXV88_10165 PF01612 3'-5' exonuclease HXV88_10170 PF00753 Metallo-beta-lactamase superfamily HXV88_10180 PF02769 AIR synthase related protein, C-terminal domain HXV88_10180 PF00586 AIR synthase related protein, N-terminal domain HXV88_10195 PF17785 PUA-like domain HXV88_10195 PF10672 S-adenosylmethionine-dependent methyltransferase HXV88_10200 PF00672 HAMP domain HXV88_10200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_10200 PF12729 Four helix bundle sensory module for signal transduction HXV88_10205 PF00708 Acylphosphatase HXV88_10215 PF01588 Putative tRNA binding domain HXV88_10215 PF08264 Anticodon-binding domain of tRNA HXV88_10215 PF09334 tRNA synthetases class I (M) HXV88_10220 PF10609 NUBPL iron-transfer P-loop NTPase HXV88_10225 PF00485 Phosphoribulokinase / Uridine kinase family HXV88_10230 PF00692 dUTPase HXV88_10235 PF01384 Phosphate transporter family HXV88_10240 PF06945 Protein of unknown function (DUF1289) HXV88_10245 PF06725 3D domain HXV88_10245 PF03562 MltA specific insert domain HXV88_10250 PF00111 2Fe-2S iron-sulfur cluster binding domain HXV88_10255 PF00268 Ribonucleotide reductase, small chain HXV88_10260 PF03477 ATP cone domain HXV88_10260 PF02867 Ribonucleotide reductase, barrel domain HXV88_10260 PF00317 Ribonucleotide reductase, all-alpha domain HXV88_10265 PF13419 Haloacid dehalogenase-like hydrolase HXV88_10275 PF00521 DNA gyrase/topoisomerase IV, subunit A HXV88_10275 PF03989 DNA gyrase C-terminal domain, beta-propeller HXV88_10280 PF00128 Alpha amylase, catalytic domain HXV88_10290 PF04055 Radical SAM superfamily HXV88_10300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HXV88_10300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HXV88_10300 PF03129 Anticodon binding domain HXV88_10300 PF02824 TGS domain HXV88_10305 PF00707 Translation initiation factor IF-3, C-terminal domain HXV88_10305 PF05198 Translation initiation factor IF-3, N-terminal domain HXV88_10310 PF01632 Ribosomal protein L35 HXV88_10315 PF00453 Ribosomal protein L20 HXV88_10320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HXV88_10320 PF01409 tRNA synthetases class II core domain (F) HXV88_10325 PF03147 Ferredoxin-fold anticodon binding domain HXV88_10325 PF01588 Putative tRNA binding domain HXV88_10325 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HXV88_10325 PF03484 tRNA synthetase B5 domain HXV88_10325 PF03483 B3/4 domain HXV88_10330 PF00216 Bacterial DNA-binding protein HXV88_10335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_10335 PF00512 His Kinase A (phospho-acceptor) domain HXV88_10335 PF09456 RcsC Alpha-Beta-Loop (ABL) HXV88_10335 PF00072 Response regulator receiver domain HXV88_10350 PF02146 Sir2 family HXV88_10360 PF00563 EAL domain HXV88_10360 PF00990 Diguanylate cyclase, GGDEF domain HXV88_10360 PF03707 Bacterial signalling protein N terminal repeat HXV88_10365 PF00356 Bacterial regulatory proteins, lacI family HXV88_10370 PF00294 pfkB family carbohydrate kinase HXV88_10375 PF13407 Periplasmic binding protein domain HXV88_10380 PF02653 Branched-chain amino acid transport system / permease component HXV88_10385 PF00005 ABC transporter HXV88_10390 PF05025 RbsD / FucU transport protein family HXV88_10420 PF13416 Bacterial extracellular solute-binding protein HXV88_10425 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_10430 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_10435 PF08402 TOBE domain HXV88_10435 PF00005 ABC transporter HXV88_10450 PF01171 PP-loop family HXV88_10455 PF00582 Universal stress protein family HXV88_10460 PF13545 Crp-like helix-turn-helix domain HXV88_10460 PF00027 Cyclic nucleotide-binding domain HXV88_10475 PF00403 Heavy-metal-associated domain HXV88_10485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HXV88_10485 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HXV88_10500 PF00115 Cytochrome C and Quinol oxidase polypeptide I HXV88_10510 PF13185 GAF domain HXV88_10515 PF17516 ProQ C-terminal domain HXV88_10515 PF04352 ProQ/FINO family HXV88_10520 PF00595 PDZ domain HXV88_10520 PF17804 Tail specific protease N-terminal domain HXV88_10520 PF11818 C-terminal domain of tail specific protease (DUF3340) HXV88_10520 PF03572 Peptidase family S41 HXV88_10525 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HXV88_10525 PF01433 Peptidase family M1 domain HXV88_10525 PF11940 Domain of unknown function (DUF3458) Ig-like fold HXV88_10535 PF05088 Bacterial NAD-glutamate dehydrogenase HXV88_10540 PF01180 Dihydroorotate dehydrogenase HXV88_10545 PF07126 Cell-division protein ZapC HXV88_10555 PF01197 Ribosomal protein L31 HXV88_10560 PF00444 Ribosomal protein L36 HXV88_10565 PF02926 THUMP domain HXV88_10565 PF10672 S-adenosylmethionine-dependent methyltransferase HXV88_10565 PF01170 Putative RNA methylase family UPF0020 HXV88_10580 PF04957 Ribosome modulation factor HXV88_10585 PF07977 FabA-like domain HXV88_10590 PF13654 AAA domain HXV88_10590 PF05362 Lon protease (S16) C-terminal proteolytic domain HXV88_10605 PF05707 Zonular occludens toxin (Zot) HXV88_10610 PF10734 Protein of unknown function (DUF2523) HXV88_10655 PF05707 Zonular occludens toxin (Zot) HXV88_10660 PF10734 Protein of unknown function (DUF2523) HXV88_10710 PF07130 YebG protein HXV88_10715 PF01674 Lipase (class 2) HXV88_10720 PF00106 short chain dehydrogenase HXV88_10745 PF06974 Protein of unknown function (DUF1298) HXV88_10745 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HXV88_10760 PF03972 MmgE/PrpD family HXV88_10765 PF00285 Citrate synthase, C-terminal domain HXV88_10780 PF04403 Paraquat-inducible protein A HXV88_10785 PF02470 MlaD protein HXV88_10790 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HXV88_10790 PF01189 16S rRNA methyltransferase RsmB/F HXV88_10790 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HXV88_10800 PF00589 Phage integrase family HXV88_10805 PF01026 TatD related DNase HXV88_10810 PF09115 DNA polymerase III, delta subunit, C terminal HXV88_10815 PF02223 Thymidylate kinase HXV88_10820 PF02618 YceG-like family HXV88_10825 PF01063 Amino-transferase class IV HXV88_10830 PF02801 Beta-ketoacyl synthase, C-terminal domain HXV88_10830 PF00109 Beta-ketoacyl synthase, N-terminal domain HXV88_10835 PF00550 Phosphopantetheine attachment site HXV88_10845 PF00698 Acyl transferase domain HXV88_10850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HXV88_10850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HXV88_10855 PF02504 Fatty acid synthesis protein HXV88_10860 PF01783 Ribosomal L32p protein family HXV88_10865 PF02620 Large ribosomal RNA subunit accumulation protein YceD HXV88_10870 PF02545 Maf-like protein HXV88_10880 PF00849 RNA pseudouridylate synthase HXV88_10880 PF01479 S4 domain HXV88_10885 PF00575 S1 RNA binding domain HXV88_10885 PF10150 Ribonuclease E/G family HXV88_10885 PF12111 Polyribonucleotide phosphorylase C terminal HXV88_10890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HXV88_10890 PF02378 Phosphotransferase system, EIIC HXV88_10895 PF00294 pfkB family carbohydrate kinase HXV88_10900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HXV88_10900 PF00381 PTS HPr component phosphorylation site HXV88_10905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HXV88_10905 PF00356 Bacterial regulatory proteins, lacI family HXV88_10910 PF03222 Tryptophan/tyrosine permease family HXV88_10930 PF00270 DEAD/DEAH box helicase HXV88_10930 PF00271 Helicase conserved C-terminal domain HXV88_10940 PF01264 Chorismate synthase HXV88_10945 PF05175 Methyltransferase small domain HXV88_10950 PF01713 Smr domain HXV88_10955 PF00990 Diguanylate cyclase, GGDEF domain HXV88_10955 PF08448 PAS fold HXV88_10960 PF00300 Histidine phosphatase superfamily (branch 1) HXV88_10970 PF08329 Chitinase A, N-terminal domain HXV88_10970 PF00704 Glycosyl hydrolases family 18 HXV88_10980 PF08274 PhnA Zinc-Ribbon HXV88_10980 PF03831 PhnA domain HXV88_10990 PF04715 Anthranilate synthase component I, N terminal region HXV88_10990 PF00425 chorismate binding enzyme HXV88_10995 PF00293 NUDIX domain HXV88_11000 PF03222 Tryptophan/tyrosine permease family HXV88_11005 PF00375 Sodium:dicarboxylate symporter family HXV88_11010 PF16124 RecQ zinc-binding HXV88_11010 PF00270 DEAD/DEAH box helicase HXV88_11010 PF00271 Helicase conserved C-terminal domain HXV88_11010 PF00570 HRDC domain HXV88_11010 PF09382 RQC domain HXV88_11015 PF06798 PrkA serine protein kinase C-terminal domain HXV88_11015 PF08298 PrkA AAA domain HXV88_11020 PF04285 Protein of unknown function (DUF444) HXV88_11025 PF04293 SpoVR like protein HXV88_11030 PF00378 Enoyl-CoA hydratase/isomerase HXV88_11030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HXV88_11030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HXV88_11035 PF00108 Thiolase, N-terminal domain HXV88_11035 PF02803 Thiolase, C-terminal domain HXV88_11040 PF07726 ATPase family associated with various cellular activities (AAA) HXV88_11040 PF17863 AAA lid domain HXV88_11045 PF01882 Protein of unknown function DUF58 HXV88_11060 PF13519 von Willebrand factor type A domain HXV88_11070 PF08281 Sigma-70, region 4 HXV88_11070 PF04542 Sigma-70 region 2 HXV88_11080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HXV88_11085 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HXV88_11090 PF08668 HDOD domain HXV88_11090 PF00563 EAL domain HXV88_11095 PF02803 Thiolase, C-terminal domain HXV88_11095 PF00108 Thiolase, N-terminal domain HXV88_11100 PF00376 MerR family regulatory protein HXV88_11100 PF09278 MerR, DNA binding HXV88_11105 PF01386 Ribosomal L25p family HXV88_11115 PF04408 Helicase associated domain (HA2) HXV88_11115 PF11898 Domain of unknown function (DUF3418) HXV88_11115 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HXV88_11115 PF00271 Helicase conserved C-terminal domain HXV88_11115 PF00270 DEAD/DEAH box helicase HXV88_11120 PF00571 CBS domain HXV88_11120 PF01368 DHH family HXV88_11120 PF02272 DHHA1 domain HXV88_11120 PF01743 Poly A polymerase head domain HXV88_11125 PF01966 HD domain HXV88_11130 PF00884 Sulfatase HXV88_11135 PF07726 ATPase family associated with various cellular activities (AAA) HXV88_11135 PF17863 AAA lid domain HXV88_11150 PF13519 von Willebrand factor type A domain HXV88_11150 PF07584 Aerotolerance regulator N-terminal HXV88_11155 PF07584 Aerotolerance regulator N-terminal HXV88_11155 PF13519 von Willebrand factor type A domain HXV88_11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_11170 PF03466 LysR substrate binding domain HXV88_11175 PF03781 Sulfatase-modifying factor enzyme 1 HXV88_11185 PF13186 Iron-sulfur cluster-binding domain HXV88_11185 PF04055 Radical SAM superfamily HXV88_11190 PF08411 Exonuclease C-terminal HXV88_11190 PF00929 Exonuclease HXV88_11205 PF03788 LrgA family HXV88_11210 PF04172 LrgB-like family HXV88_11215 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HXV88_11215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HXV88_11220 PF01212 Beta-eliminating lyase HXV88_11230 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HXV88_11235 PF01266 FAD dependent oxidoreductase HXV88_11240 PF01118 Semialdehyde dehydrogenase, NAD binding domain HXV88_11240 PF02774 Semialdehyde dehydrogenase, dimerisation domain HXV88_11245 PF02634 FdhD/NarQ family HXV88_11250 PF00158 Sigma-54 interaction domain HXV88_11250 PF02954 Bacterial regulatory protein, Fis family HXV88_11250 PF01590 GAF domain HXV88_11265 PF13247 4Fe-4S dicluster domain HXV88_11265 PF12800 4Fe-4S binding domain HXV88_11280 PF02705 K+ potassium transporter HXV88_11295 PF00037 4Fe-4S binding domain HXV88_11295 PF12798 4Fe-4S binding domain HXV88_11300 PF00361 Proton-conducting membrane transporter HXV88_11305 PF00146 NADH dehydrogenase HXV88_11310 PF00374 Nickel-dependent hydrogenase HXV88_11310 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HXV88_11310 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HXV88_11315 PF12838 4Fe-4S dicluster domain HXV88_11320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HXV88_11325 PF07450 Formate hydrogenlyase maturation protein HycH HXV88_11330 PF01750 Hydrogenase maturation protease HXV88_11340 PF12390 Selenocysteine synthase N terminal HXV88_11340 PF03841 L-seryl-tRNA selenium transferase HXV88_11345 PF09107 Elongation factor SelB, winged helix HXV88_11345 PF09106 Elongation factor SelB, winged helix HXV88_11345 PF03144 Elongation factor Tu domain 2 HXV88_11345 PF00009 Elongation factor Tu GTP binding domain HXV88_11345 PF09105 Elongation factor SelB, winged helix HXV88_11350 PF00708 Acylphosphatase HXV88_11350 PF17788 HypF Kae1-like domain HXV88_11350 PF07503 HypF finger HXV88_11350 PF01300 Telomere recombination HXV88_11355 PF01455 HupF/HypC family HXV88_11360 PF01924 Hydrogenase formation hypA family HXV88_11365 PF02769 AIR synthase related protein, C-terminal domain HXV88_11365 PF00586 AIR synthase related protein, N-terminal domain HXV88_11370 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HXV88_11375 PF02492 CobW/HypB/UreG, nucleotide-binding domain HXV88_11380 PF00005 ABC transporter HXV88_11385 PF00005 ABC transporter HXV88_11385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_11390 PF12911 N-terminal TM domain of oligopeptide transport permease C HXV88_11390 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_11395 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_11400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_11405 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE HXV88_11410 PF01750 Hydrogenase maturation protease HXV88_11415 PF00374 Nickel-dependent hydrogenase HXV88_11420 PF03916 Polysulphide reductase, NrfD HXV88_11425 PF13247 4Fe-4S dicluster domain HXV88_11430 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HXV88_11430 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HXV88_11435 PF00360 Phytochrome region HXV88_11435 PF00990 Diguanylate cyclase, GGDEF domain HXV88_11435 PF01590 GAF domain HXV88_11435 PF00563 EAL domain HXV88_11440 PF00534 Glycosyl transferases group 1 HXV88_11440 PF00862 Sucrose synthase HXV88_11445 PF13439 Glycosyltransferase Family 4 HXV88_11445 PF00534 Glycosyl transferases group 1 HXV88_11495 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HXV88_11510 PF00534 Glycosyl transferases group 1 HXV88_11510 PF13439 Glycosyltransferase Family 4 HXV88_11515 PF03552 Cellulose synthase HXV88_11515 PF00535 Glycosyl transferase family 2 HXV88_11515 PF07238 PilZ domain HXV88_11520 PF02397 Bacterial sugar transferase HXV88_11525 PF00534 Glycosyl transferases group 1 HXV88_11530 PF00072 Response regulator receiver domain HXV88_11530 PF00211 Adenylate and Guanylate cyclase catalytic domain HXV88_11560 PF00512 His Kinase A (phospho-acceptor) domain HXV88_11560 PF09308 LuxQ, periplasmic HXV88_11560 PF00072 Response regulator receiver domain HXV88_11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_11565 PF03466 LysR substrate binding domain HXV88_11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_11580 PF07690 Major Facilitator Superfamily HXV88_11595 PF01925 Sulfite exporter TauE/SafE HXV88_11600 PF13520 Amino acid permease HXV88_11610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HXV88_11610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HXV88_11615 PF00378 Enoyl-CoA hydratase/isomerase HXV88_11620 PF00378 Enoyl-CoA hydratase/isomerase HXV88_11625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HXV88_11625 PF02770 Acyl-CoA dehydrogenase, middle domain HXV88_11625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HXV88_11630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HXV88_11630 PF02770 Acyl-CoA dehydrogenase, middle domain HXV88_11630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HXV88_11635 PF01039 Carboxyl transferase domain HXV88_11640 PF00378 Enoyl-CoA hydratase/isomerase HXV88_11645 PF00289 Biotin carboxylase, N-terminal domain HXV88_11645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HXV88_11645 PF02785 Biotin carboxylase C-terminal domain HXV88_11645 PF00364 Biotin-requiring enzyme HXV88_11650 PF00682 HMGL-like HXV88_11655 PF09278 MerR, DNA binding HXV88_11655 PF00376 MerR family regulatory protein HXV88_11670 PF01184 GPR1/FUN34/yaaH family HXV88_11675 PF00589 Phage integrase family HXV88_11675 PF02899 Phage integrase, N-terminal SAM-like domain HXV88_11730 PF01555 DNA methylase HXV88_11755 PF12706 Beta-lactamase superfamily domain HXV88_11760 PF00591 Glycosyl transferase family, a/b domain HXV88_11760 PF02885 Glycosyl transferase family, helical bundle domain HXV88_11760 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HXV88_11765 PF01791 DeoC/LacD family aldolase HXV88_11775 PF12146 Serine aminopeptidase, S33 HXV88_11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_11780 PF03466 LysR substrate binding domain HXV88_11785 PF12146 Serine aminopeptidase, S33 HXV88_11790 PF06167 Glucose-regulated metallo-peptidase M90 HXV88_11800 PF01235 Sodium:alanine symporter family HXV88_11835 PF00378 Enoyl-CoA hydratase/isomerase HXV88_11850 PF04341 Protein of unknown function, DUF485 HXV88_11855 PF00474 Sodium:solute symporter family HXV88_11995 PF00816 H-NS histone family HXV88_12015 PF00717 Peptidase S24-like HXV88_12020 PF11798 IMS family HHH motif HXV88_12020 PF11799 impB/mucB/samB family C-terminal domain HXV88_12020 PF00817 impB/mucB/samB family HXV88_12020 PF13438 Domain of unknown function (DUF4113) HXV88_12085 PF00400 WD domain, G-beta repeat HXV88_12170 PF00589 Phage integrase family HXV88_12170 PF12167 Arm DNA-binding domain HXV88_12175 PF00005 ABC transporter HXV88_12175 PF12848 ABC transporter HXV88_12180 PF13145 PPIC-type PPIASE domain HXV88_12185 PF00216 Bacterial DNA-binding protein HXV88_12190 PF05362 Lon protease (S16) C-terminal proteolytic domain HXV88_12190 PF02190 ATP-dependent protease La (LON) substrate-binding domain HXV88_12190 PF00004 ATPase family associated with various cellular activities (AAA) HXV88_12195 PF10431 C-terminal, D2-small domain, of ClpB protein HXV88_12195 PF07724 AAA domain (Cdc48 subfamily) HXV88_12195 PF06689 ClpX C4-type zinc finger HXV88_12200 PF00574 Clp protease HXV88_12205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HXV88_12205 PF05698 Bacterial trigger factor protein (TF) C-terminus HXV88_12205 PF05697 Bacterial trigger factor protein (TF) HXV88_12220 PF12704 MacB-like periplasmic core domain HXV88_12220 PF02687 FtsX-like permease family HXV88_12225 PF00005 ABC transporter HXV88_12230 PF12704 MacB-like periplasmic core domain HXV88_12230 PF02687 FtsX-like permease family HXV88_12240 PF00270 DEAD/DEAH box helicase HXV88_12240 PF00271 Helicase conserved C-terminal domain HXV88_12240 PF03461 TRCF domain HXV88_12240 PF02559 CarD-like/TRCF domain HXV88_12240 PF17757 UvrB interaction domain HXV88_12245 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HXV88_12250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_12255 PF00892 EamA-like transporter family HXV88_12265 PF00300 Histidine phosphatase superfamily (branch 1) HXV88_12270 PF16187 Middle or third domain of peptidase_M16 HXV88_12270 PF00675 Insulinase (Peptidase family M16) HXV88_12270 PF05193 Peptidase M16 inactive domain HXV88_12275 PF05724 Thiopurine S-methyltransferase (TPMT) HXV88_12290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HXV88_12290 PF12833 Helix-turn-helix domain HXV88_12290 PF02805 Metal binding domain of Ada HXV88_12290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HXV88_12305 PF00958 GMP synthase C terminal domain HXV88_12305 PF02540 NAD synthase HXV88_12305 PF00117 Glutamine amidotransferase class-I HXV88_12310 PF00478 IMP dehydrogenase / GMP reductase domain HXV88_12310 PF00571 CBS domain HXV88_12315 PF01292 Prokaryotic cytochrome b561 HXV88_12320 PF13742 OB-fold nucleic acid binding domain HXV88_12320 PF02601 Exonuclease VII, large subunit HXV88_12325 PF00392 Bacterial regulatory proteins, gntR family HXV88_12325 PF07702 UTRA domain HXV88_12330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HXV88_12330 PF02378 Phosphotransferase system, EIIC HXV88_12330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HXV88_12335 PF07748 Glycosyl hydrolases family 38 C-terminal domain HXV88_12335 PF01074 Glycosyl hydrolases family 38 N-terminal domain HXV88_12335 PF09261 Alpha mannosidase middle domain HXV88_12340 PF07478 D-ala D-ala ligase C-terminus HXV88_12340 PF01820 D-ala D-ala ligase N-terminus HXV88_12350 PF00255 Glutathione peroxidase HXV88_12355 PF00271 Helicase conserved C-terminal domain HXV88_12355 PF00270 DEAD/DEAH box helicase HXV88_12360 PF04055 Radical SAM superfamily HXV88_12365 PF00672 HAMP domain HXV88_12365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_12370 PF00793 DAHP synthetase I family HXV88_12375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HXV88_12380 PF00266 Aminotransferase class-V HXV88_12385 PF01012 Electron transfer flavoprotein domain HXV88_12385 PF00766 Electron transfer flavoprotein FAD-binding domain HXV88_12390 PF01012 Electron transfer flavoprotein domain HXV88_12400 PF01544 CorA-like Mg2+ transporter protein HXV88_12405 PF11143 Protein of unknown function (DUF2919) HXV88_12415 PF07273 Protein of unknown function (DUF1439) HXV88_12425 PF00483 Nucleotidyl transferase HXV88_12430 PF03707 Bacterial signalling protein N terminal repeat HXV88_12430 PF00563 EAL domain HXV88_12430 PF00990 Diguanylate cyclase, GGDEF domain HXV88_12445 PF00294 pfkB family carbohydrate kinase HXV88_12455 PF00762 Ferrochelatase HXV88_12460 PF05191 Adenylate kinase, active site lid HXV88_12465 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HXV88_12470 PF00156 Phosphoribosyl transferase domain HXV88_12475 PF02674 Colicin V production protein HXV88_12485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HXV88_12485 PF02403 Seryl-tRNA synthetase N-terminal domain HXV88_12490 PF12002 MgsA AAA+ ATPase C terminal HXV88_12490 PF16193 AAA C-terminal domain HXV88_12490 PF00004 ATPase family associated with various cellular activities (AAA) HXV88_12495 PF03548 Outer membrane lipoprotein carrier protein LolA HXV88_12500 PF17854 FtsK alpha domain HXV88_12500 PF09397 Ftsk gamma domain HXV88_12500 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HXV88_12500 PF01580 FtsK/SpoIIIE family HXV88_12505 PF01037 Lrp/AsnC ligand binding domain HXV88_12510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HXV88_12510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HXV88_12515 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_12520 PF00990 Diguanylate cyclase, GGDEF domain HXV88_12520 PF17158 Membrane-associated sensor, integral membrane domain HXV88_12525 PF05433 Glycine zipper 2TM domain HXV88_12530 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HXV88_12535 PF04377 Arginine-tRNA-protein transferase, C terminus HXV88_12535 PF04376 Arginine-tRNA-protein transferase, N terminus HXV88_12540 PF01176 Translation initiation factor 1A / IF-1 HXV88_12545 PF10431 C-terminal, D2-small domain, of ClpB protein HXV88_12545 PF07724 AAA domain (Cdc48 subfamily) HXV88_12545 PF17871 AAA lid domain HXV88_12545 PF02861 Clp amino terminal domain, pathogenicity island component HXV88_12545 PF00004 ATPase family associated with various cellular activities (AAA) HXV88_12550 PF02617 ATP-dependent Clp protease adaptor protein ClpS HXV88_12555 PF00313 'Cold-shock' DNA-binding domain HXV88_12560 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HXV88_12560 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HXV88_12580 PF00072 Response regulator receiver domain HXV88_12580 PF00486 Transcriptional regulatory protein, C terminal HXV88_12585 PF00672 HAMP domain HXV88_12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_12585 PF00512 His Kinase A (phospho-acceptor) domain HXV88_12595 PF03706 Lysylphosphatidylglycerol synthase TM region HXV88_12595 PF09924 Uncharacterised conserved protein (DUF2156) HXV88_12610 PF10722 Putative bacterial sensory transduction regulator HXV88_12620 PF00265 Thymidine kinase HXV88_12625 PF03553 Na+/H+ antiporter family HXV88_12630 PF00816 H-NS histone family HXV88_12635 PF01923 Cobalamin adenosyltransferase HXV88_12640 PF12843 Putative quorum-sensing-regulated virulence factor HXV88_12645 PF04055 Radical SAM superfamily HXV88_12650 PF06508 Queuosine biosynthesis protein QueC HXV88_12665 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HXV88_12670 PF18073 Rubredoxin metal binding domain HXV88_12680 PF00216 Bacterial DNA-binding protein HXV88_12685 PF00575 S1 RNA binding domain HXV88_12690 PF02224 Cytidylate kinase HXV88_12695 PF00925 GTP cyclohydrolase II HXV88_12700 PF03466 LysR substrate binding domain HXV88_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_12705 PF03466 LysR substrate binding domain HXV88_12705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_12710 PF07690 Major Facilitator Superfamily HXV88_12725 PF00881 Nitroreductase family HXV88_12730 PF03806 AbgT putative transporter family HXV88_12735 PF13188 PAS domain HXV88_12735 PF00563 EAL domain HXV88_12735 PF00990 Diguanylate cyclase, GGDEF domain HXV88_12735 PF03707 Bacterial signalling protein N terminal repeat HXV88_12740 PF03466 LysR substrate binding domain HXV88_12740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_12745 PF00072 Response regulator receiver domain HXV88_12755 PF01212 Beta-eliminating lyase HXV88_12760 PF00106 short chain dehydrogenase HXV88_12770 PF00248 Aldo/keto reductase family HXV88_12775 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HXV88_12785 PF00005 ABC transporter HXV88_12790 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_12795 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_12800 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_12805 PF03411 Penicillin-insensitive murein endopeptidase HXV88_12815 PF04536 TPM domain HXV88_12830 PF01618 MotA/TolQ/ExbB proton channel family HXV88_12835 PF00691 OmpA family HXV88_12835 PF13677 Membrane MotB of proton-channel complex MotA/MotB HXV88_12840 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HXV88_12845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HXV88_12850 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HXV88_12850 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HXV88_12860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HXV88_12860 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HXV88_12865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HXV88_12865 PF00384 Molybdopterin oxidoreductase HXV88_12865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HXV88_12870 PF00146 NADH dehydrogenase HXV88_12875 PF12838 4Fe-4S dicluster domain HXV88_12880 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HXV88_12885 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HXV88_12890 PF00361 Proton-conducting membrane transporter HXV88_12890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HXV88_12895 PF00361 Proton-conducting membrane transporter HXV88_12900 PF00361 Proton-conducting membrane transporter HXV88_12910 PF00072 Response regulator receiver domain HXV88_12915 PF01966 HD domain HXV88_12920 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HXV88_12920 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HXV88_12920 PF02769 AIR synthase related protein, C-terminal domain HXV88_12925 PF01464 Transglycosylase SLT domain HXV88_12925 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_12930 PF07191 zinc-ribbons HXV88_12935 PF01926 50S ribosome-binding GTPase HXV88_12935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HXV88_12940 PF13360 PQQ-like domain HXV88_12945 PF09976 Tetratricopeptide repeat-like domain HXV88_12950 PF03129 Anticodon binding domain HXV88_12950 PF13393 Histidyl-tRNA synthetase HXV88_12960 PF13464 Domain of unknown function (DUF4115) HXV88_12970 PF04055 Radical SAM superfamily HXV88_12975 PF00334 Nucleoside diphosphate kinase HXV88_12980 PF12404 Peptidase HXV88_12980 PF00883 Cytosol aminopeptidase family, catalytic domain HXV88_12985 PF12404 Peptidase HXV88_12985 PF00883 Cytosol aminopeptidase family, catalytic domain HXV88_12990 PF00111 2Fe-2S iron-sulfur cluster binding domain HXV88_12995 PF00012 Hsp70 protein HXV88_13000 PF00226 DnaJ domain HXV88_13000 PF07743 HSCB C-terminal oligomerisation domain HXV88_13005 PF01521 Iron-sulphur cluster biosynthesis HXV88_13010 PF01592 NifU-like N terminal domain HXV88_13015 PF00266 Aminotransferase class-V HXV88_13020 PF02082 Transcriptional regulator HXV88_13025 PF00588 SpoU rRNA Methylase family HXV88_13035 PF02036 SCP-2 sterol transfer family HXV88_13040 PF01136 Peptidase family U32 HXV88_13045 PF01136 Peptidase family U32 HXV88_13050 PF07719 Tetratricopeptide repeat HXV88_13050 PF13181 Tetratricopeptide repeat HXV88_13060 PF07549 SecD/SecF GG Motif HXV88_13060 PF02355 Protein export membrane protein HXV88_13065 PF13721 SecD export protein N-terminal TM region HXV88_13065 PF07549 SecD/SecF GG Motif HXV88_13065 PF02355 Protein export membrane protein HXV88_13070 PF02699 Preprotein translocase subunit HXV88_13075 PF01702 Queuine tRNA-ribosyltransferase HXV88_13080 PF02547 Queuosine biosynthesis protein HXV88_13085 PF00571 CBS domain HXV88_13090 PF00578 AhpC/TSA family HXV88_13090 PF10417 C-terminal domain of 1-Cys peroxiredoxin HXV88_13095 PF13192 Thioredoxin domain HXV88_13095 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_13135 PF03412 Peptidase C39 family HXV88_13135 PF00005 ABC transporter HXV88_13135 PF00664 ABC transporter transmembrane region HXV88_13140 PF04055 Radical SAM superfamily HXV88_13140 PF16199 Radical_SAM C-terminal domain HXV88_13145 PF01645 Conserved region in glutamate synthase HXV88_13145 PF04898 Glutamate synthase central domain HXV88_13145 PF00310 Glutamine amidotransferases class-II HXV88_13145 PF01493 GXGXG motif HXV88_13150 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_13150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HXV88_13160 PF00270 DEAD/DEAH box helicase HXV88_13160 PF00271 Helicase conserved C-terminal domain HXV88_13175 PF07670 Nucleoside recognition HXV88_13175 PF02421 Ferrous iron transport protein B HXV88_13175 PF07664 Ferrous iron transport protein B C terminus HXV88_13185 PF01253 Translation initiation factor SUI1 HXV88_13190 PF01169 Uncharacterized protein family UPF0016 HXV88_13240 PF01406 tRNA synthetases class I (C) catalytic domain HXV88_13240 PF09190 DALR domain HXV88_13245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HXV88_13255 PF00149 Calcineurin-like phosphoesterase HXV88_13265 PF04226 Transglycosylase associated protein HXV88_13270 PF08521 Two-component sensor kinase N-terminal HXV88_13270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_13270 PF00512 His Kinase A (phospho-acceptor) domain HXV88_13275 PF00072 Response regulator receiver domain HXV88_13275 PF00486 Transcriptional regulatory protein, C terminal HXV88_13290 PF01970 Tripartite tricarboxylate transporter TctA family HXV88_13295 PF02798 Glutathione S-transferase, N-terminal domain HXV88_13295 PF14497 Glutathione S-transferase, C-terminal domain HXV88_13305 PF04209 homogentisate 1,2-dioxygenase HXV88_13310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HXV88_13320 PF00849 RNA pseudouridylate synthase HXV88_13325 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_13330 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_13335 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_13340 PF00005 ABC transporter HXV88_13345 PF03956 Lysine exporter LysO HXV88_13350 PF01979 Amidohydrolase family HXV88_13355 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_13360 PF04336 Acyl carrier protein phosphodiesterase HXV88_13370 PF03960 ArsC family HXV88_13375 PF00578 AhpC/TSA family HXV88_13380 PF07720 Tetratricopeptide repeat HXV88_13380 PF01435 Peptidase family M48 HXV88_13390 PF01594 AI-2E family transporter HXV88_13400 PF00561 alpha/beta hydrolase fold HXV88_13405 PF03976 Polyphosphate kinase 2 (PPK2) HXV88_13410 PF08402 TOBE domain HXV88_13410 PF00005 ABC transporter HXV88_13415 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_13420 PF14785 Maltose transport system permease protein MalF P2 domain HXV88_13420 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_13425 PF01547 Bacterial extracellular solute-binding protein HXV88_13430 PF04245 37-kD nucleoid-associated bacterial protein HXV88_13435 PF07208 Protein of unknown function (DUF1414) HXV88_13440 PF11893 Domain of unknown function (DUF3413) HXV88_13440 PF00884 Sulfatase HXV88_13445 PF03180 NLPA lipoprotein HXV88_13450 PF01483 Proprotein convertase P-domain HXV88_13450 PF00082 Subtilase family HXV88_13460 PF00391 PEP-utilising enzyme, mobile domain HXV88_13460 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HXV88_13460 PF02896 PEP-utilising enzyme, TIM barrel domain HXV88_13465 PF03618 Kinase/pyrophosphorylase HXV88_13475 PF00324 Amino acid permease HXV88_13535 PF01066 CDP-alcohol phosphatidyltransferase HXV88_13540 PF08459 UvrC Helix-hairpin-helix N-terminal HXV88_13540 PF01541 GIY-YIG catalytic domain HXV88_13540 PF02151 UvrB/uvrC motif HXV88_13545 PF00072 Response regulator receiver domain HXV88_13545 PF00196 Bacterial regulatory proteins, luxR family HXV88_13550 PF02348 Cytidylyltransferase HXV88_13555 PF03966 Trm112p-like protein HXV88_13560 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HXV88_13565 PF00005 ABC transporter HXV88_13565 PF00664 ABC transporter transmembrane region HXV88_13570 PF00753 Metallo-beta-lactamase superfamily HXV88_13570 PF03772 Competence protein HXV88_13585 PF00155 Aminotransferase class I and II HXV88_13595 PF03466 LysR substrate binding domain HXV88_13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_13600 PF04219 Protein of unknown function, DUF HXV88_13605 PF03974 Ecotin HXV88_13610 PF03009 Glycerophosphoryl diester phosphodiesterase family HXV88_13615 PF01266 FAD dependent oxidoreductase HXV88_13615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HXV88_13620 PF00455 DeoR C terminal sensor domain HXV88_13620 PF08220 DeoR-like helix-turn-helix domain HXV88_13625 PF07690 Major Facilitator Superfamily HXV88_13630 PF00230 Major intrinsic protein HXV88_13635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HXV88_13635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HXV88_13640 PF02743 Cache domain HXV88_13640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_13640 PF00672 HAMP domain HXV88_13650 PF03466 LysR substrate binding domain HXV88_13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_13670 PF00248 Aldo/keto reductase family HXV88_13680 PF07690 Major Facilitator Superfamily HXV88_13685 PF02525 Flavodoxin-like fold HXV88_13700 PF05114 Protein of unknown function (DUF692) HXV88_13720 PF02322 Cytochrome bd terminal oxidase subunit II HXV88_13725 PF01654 Cytochrome bd terminal oxidase subunit I HXV88_13730 PF00392 Bacterial regulatory proteins, gntR family HXV88_13730 PF00155 Aminotransferase class I and II HXV88_13740 PF04391 Protein of unknown function (DUF533) HXV88_13745 PF03061 Thioesterase superfamily HXV88_13750 PF10689 Protein of unknown function (DUF2496) HXV88_13755 PF03466 LysR substrate binding domain HXV88_13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_13760 PF07690 Major Facilitator Superfamily HXV88_13765 PF01479 S4 domain HXV88_13765 PF00849 RNA pseudouridylate synthase HXV88_13775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HXV88_13785 PF01844 HNH endonuclease HXV88_13790 PF02508 Rnf-Nqr subunit, membrane protein HXV88_13795 PF04060 Putative Fe-S cluster HXV88_13800 PF12838 4Fe-4S dicluster domain HXV88_13800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HXV88_13800 PF13375 RnfC Barrel sandwich hybrid domain HXV88_13800 PF10531 SLBB domain HXV88_13805 PF03116 NQR2, RnfD, RnfE family HXV88_13810 PF04205 FMN-binding domain HXV88_13815 PF02508 Rnf-Nqr subunit, membrane protein HXV88_13820 PF00730 HhH-GPD superfamily base excision DNA repair protein HXV88_13820 PF00633 Helix-hairpin-helix motif HXV88_13820 PF10576 Iron-sulfur binding domain of endonuclease III HXV88_13825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HXV88_13830 PF00691 OmpA family HXV88_13830 PF18393 MotY N-terminal domain HXV88_13860 PF07759 Protein of unknown function (DUF1615) HXV88_13865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HXV88_13865 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HXV88_13865 PF02142 MGS-like domain HXV88_13870 PF00117 Glutamine amidotransferase class-I HXV88_13870 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HXV88_13875 PF01113 Dihydrodipicolinate reductase, N-terminus HXV88_13875 PF05173 Dihydrodipicolinate reductase, C-terminus HXV88_13890 PF01812 5-formyltetrahydrofolate cyclo-ligase family HXV88_13895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HXV88_13900 PF01842 ACT domain HXV88_13900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HXV88_13900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HXV88_13905 PF01219 Prokaryotic diacylglycerol kinase HXV88_13910 PF00793 DAHP synthetase I family HXV88_13920 PF00005 ABC transporter HXV88_13925 PF01032 FecCD transport family HXV88_13940 PF00437 Type II/IV secretion system protein HXV88_13950 PF00842 Alanine racemase, C-terminal domain HXV88_13950 PF01168 Alanine racemase, N-terminal domain HXV88_13955 PF03741 Integral membrane protein TerC family HXV88_13960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_13960 PF00005 ABC transporter HXV88_13965 PF00005 ABC transporter HXV88_13965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_13970 PF12911 N-terminal TM domain of oligopeptide transport permease C HXV88_13970 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_13975 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_13980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_13985 PF01914 MarC family integral membrane protein HXV88_13990 PF00465 Iron-containing alcohol dehydrogenase HXV88_13990 PF00171 Aldehyde dehydrogenase family HXV88_13995 PF01709 Transcriptional regulator HXV88_14000 PF02938 GAD domain HXV88_14000 PF00152 tRNA synthetases class II (D, K and N) HXV88_14000 PF01336 OB-fold nucleic acid binding domain HXV88_14010 PF01904 Protein of unknown function DUF72 HXV88_14015 PF13649 Methyltransferase domain HXV88_14020 PF08003 Protein of unknown function (DUF1698) HXV88_14040 PF00578 AhpC/TSA family HXV88_14040 PF10417 C-terminal domain of 1-Cys peroxiredoxin HXV88_14045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_14045 PF03466 LysR substrate binding domain HXV88_14050 PF00877 NlpC/P60 family HXV88_14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_14060 PF03466 LysR substrate binding domain HXV88_14065 PF02447 GntP family permease HXV88_14070 PF00291 Pyridoxal-phosphate dependent enzyme HXV88_14080 PF00180 Isocitrate/isopropylmalate dehydrogenase HXV88_14085 PF12833 Helix-turn-helix domain HXV88_14090 PF01238 Phosphomannose isomerase type I HXV88_14095 PF00672 HAMP domain HXV88_14095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_14115 PF05656 Protein of unknown function (DUF805) HXV88_14125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HXV88_14125 PF00034 Cytochrome c HXV88_14135 PF01156 Inosine-uridine preferring nucleoside hydrolase HXV88_14145 PF00171 Aldehyde dehydrogenase family HXV88_14150 PF08359 YsiA-like protein, C-terminal region HXV88_14150 PF00440 Bacterial regulatory proteins, tetR family HXV88_14160 PF00465 Iron-containing alcohol dehydrogenase HXV88_14180 PF01554 MatE HXV88_14190 PF04325 Protein of unknown function (DUF465) HXV88_14200 PF13188 PAS domain HXV88_14200 PF00990 Diguanylate cyclase, GGDEF domain HXV88_14200 PF03707 Bacterial signalling protein N terminal repeat HXV88_14200 PF00563 EAL domain HXV88_14205 PF04337 Protein of unknown function, DUF480 HXV88_14215 PF00127 Copper binding proteins, plastocyanin/azurin family HXV88_14220 PF02424 ApbE family HXV88_14235 PF03372 Endonuclease/Exonuclease/phosphatase family HXV88_14240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_14245 PF00873 AcrB/AcrD/AcrF family HXV88_14260 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HXV88_14270 PF00529 HlyD membrane-fusion protein of T1SS HXV88_14270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_14275 PF00873 AcrB/AcrD/AcrF family HXV88_14290 PF00005 ABC transporter HXV88_14295 PF01032 FecCD transport family HXV88_14300 PF01032 FecCD transport family HXV88_14305 PF04954 Siderophore-interacting protein HXV88_14305 PF08021 Siderophore-interacting FAD-binding domain HXV88_14310 PF11849 Domain of unknown function (DUF3369) HXV88_14320 PF00929 Exonuclease HXV88_14325 PF00075 RNase H HXV88_14330 PF08241 Methyltransferase domain HXV88_14335 PF16123 Hydroxyacylglutathione hydrolase C-terminus HXV88_14335 PF00753 Metallo-beta-lactamase superfamily HXV88_14340 PF01464 Transglycosylase SLT domain HXV88_14340 PF01476 LysM domain HXV88_14345 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HXV88_14355 PF05472 DNA replication terminus site-binding protein (Ter protein) HXV88_14360 PF00271 Helicase conserved C-terminal domain HXV88_14360 PF00176 SNF2 family N-terminal domain HXV88_14360 PF04434 SWIM zinc finger HXV88_14365 PF00512 His Kinase A (phospho-acceptor) domain HXV88_14365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_14365 PF00672 HAMP domain HXV88_14370 PF00486 Transcriptional regulatory protein, C terminal HXV88_14370 PF00072 Response regulator receiver domain HXV88_14375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HXV88_14375 PF00529 HlyD membrane-fusion protein of T1SS HXV88_14380 PF00873 AcrB/AcrD/AcrF family HXV88_14390 PF05159 Capsule polysaccharide biosynthesis protein HXV88_14395 PF05159 Capsule polysaccharide biosynthesis protein HXV88_14405 PF02348 Cytidylyltransferase HXV88_14410 PF00793 DAHP synthetase I family HXV88_14420 PF05159 Capsule polysaccharide biosynthesis protein HXV88_14425 PF00571 CBS domain HXV88_14425 PF01380 SIS domain HXV88_14430 PF02563 Polysaccharide biosynthesis/export protein HXV88_14430 PF10531 SLBB domain HXV88_14440 PF00005 ABC transporter HXV88_14445 PF01061 ABC-2 type transporter HXV88_14465 PF03734 L,D-transpeptidase catalytic domain HXV88_14465 PF01476 LysM domain HXV88_14465 PF17969 L,D-transpeptidase C-terminal domain HXV88_14475 PF00939 Sodium:sulfate symporter transmembrane region HXV88_14480 PF01575 MaoC like domain HXV88_14485 PF05971 RNA methyltransferase HXV88_14490 PF00877 NlpC/P60 family HXV88_14495 PF01648 4'-phosphopantetheinyl transferase superfamily HXV88_14500 PF00085 Thioredoxin HXV88_14510 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HXV88_14515 PF00551 Formyl transferase HXV88_14515 PF01842 ACT domain HXV88_14525 PF13091 PLD-like domain HXV88_14525 PF13396 Phospholipase_D-nuclease N-terminal HXV88_14540 PF10145 Phage-related minor tail protein HXV88_14540 PF01464 Transglycosylase SLT domain HXV88_14540 PF01551 Peptidase family M23 HXV88_14545 PF00230 Major intrinsic protein HXV88_14555 PF00155 Aminotransferase class I and II HXV88_14560 PF03606 C4-dicarboxylate anaerobic carrier HXV88_14565 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HXV88_14565 PF07055 Enoyl reductase FAD binding domain HXV88_14565 PF12241 Trans-2-enoyl-CoA reductase catalytic region HXV88_14570 PF12729 Four helix bundle sensory module for signal transduction HXV88_14570 PF00672 HAMP domain HXV88_14570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_14575 PF00300 Histidine phosphatase superfamily (branch 1) HXV88_14580 PF08348 YheO-like PAS domain HXV88_14580 PF13309 HTH domain HXV88_14585 PF03313 Serine dehydratase alpha chain HXV88_14590 PF01042 Endoribonuclease L-PSP HXV88_14600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_14600 PF00672 HAMP domain HXV88_14600 PF12729 Four helix bundle sensory module for signal transduction HXV88_14615 PF14863 Alkyl sulfatase dimerisation HXV88_14615 PF00753 Metallo-beta-lactamase superfamily HXV88_14615 PF14864 Alkyl sulfatase C-terminal HXV88_14625 PF17810 Arginine decarboxylase helical bundle domain HXV88_14625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HXV88_14625 PF17944 Arginine decarboxylase C-terminal helical extension HXV88_14630 PF01546 Peptidase family M20/M25/M40 HXV88_14630 PF07687 Peptidase dimerisation domain HXV88_14645 PF05221 S-adenosyl-L-homocysteine hydrolase HXV88_14645 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HXV88_14655 PF04264 YceI-like domain HXV88_14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_14660 PF03466 LysR substrate binding domain HXV88_14670 PF01268 Formate--tetrahydrofolate ligase HXV88_14675 PF00672 HAMP domain HXV88_14675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_14675 PF17200 Single Cache domain 2 HXV88_14680 PF01227 GTP cyclohydrolase I HXV88_14685 PF03454 MoeA C-terminal region (domain IV) HXV88_14685 PF00994 Probable molybdopterin binding domain HXV88_14685 PF03453 MoeA N-terminal region (domain I and II) HXV88_14690 PF00899 ThiF family HXV88_14700 PF06406 StbA protein HXV88_14705 PF00561 alpha/beta hydrolase fold HXV88_14710 PF00005 ABC transporter HXV88_14710 PF03459 TOBE domain HXV88_14715 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_14725 PF02391 MoaE protein HXV88_14730 PF02597 ThiS family HXV88_14735 PF01967 MoaC family HXV88_14740 PF00994 Probable molybdopterin binding domain HXV88_14745 PF03264 NapC/NirT cytochrome c family, N-terminal region HXV88_14750 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HXV88_14755 PF12801 4Fe-4S binding domain HXV88_14755 PF13237 4Fe-4S dicluster domain HXV88_14760 PF12838 4Fe-4S dicluster domain HXV88_14760 PF12800 4Fe-4S binding domain HXV88_14765 PF00384 Molybdopterin oxidoreductase HXV88_14765 PF10518 TAT (twin-arginine translocation) pathway signal sequence HXV88_14765 PF01568 Molydopterin dinucleotide binding domain HXV88_14765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HXV88_14775 PF13187 4Fe-4S dicluster domain HXV88_14775 PF12838 4Fe-4S dicluster domain HXV88_14780 PF04055 Radical SAM superfamily HXV88_14780 PF06463 Molybdenum Cofactor Synthesis C HXV88_14785 PF07730 Histidine kinase HXV88_14785 PF00672 HAMP domain HXV88_14785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_14785 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HXV88_14790 PF00196 Bacterial regulatory proteins, luxR family HXV88_14790 PF00072 Response regulator receiver domain HXV88_14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_14800 PF09456 RcsC Alpha-Beta-Loop (ABL) HXV88_14800 PF00072 Response regulator receiver domain HXV88_14800 PF00512 His Kinase A (phospho-acceptor) domain HXV88_14810 PF01933 Uncharacterised protein family UPF0052 HXV88_14820 PF13230 Glutamine amidotransferases class-II HXV88_14825 PF13580 SIS domain HXV88_14830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HXV88_14830 PF09317 Domain of unknown function (DUF1974) HXV88_14830 PF02770 Acyl-CoA dehydrogenase, middle domain HXV88_14830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HXV88_14835 PF07687 Peptidase dimerisation domain HXV88_14835 PF01546 Peptidase family M20/M25/M40 HXV88_14840 PF03658 RnfH family Ubiquitin HXV88_14845 PF03364 Polyketide cyclase / dehydrase and lipid transport HXV88_14850 PF01668 SmpB protein HXV88_14860 PF00512 His Kinase A (phospho-acceptor) domain HXV88_14860 PF09456 RcsC Alpha-Beta-Loop (ABL) HXV88_14860 PF00072 Response regulator receiver domain HXV88_14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_14865 PF00563 EAL domain HXV88_14865 PF00990 Diguanylate cyclase, GGDEF domain HXV88_14865 PF03707 Bacterial signalling protein N terminal repeat HXV88_14870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HXV88_14870 PF12838 4Fe-4S dicluster domain HXV88_14870 PF00384 Molybdopterin oxidoreductase HXV88_14870 PF01568 Molydopterin dinucleotide binding domain HXV88_14870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HXV88_14895 PF00665 Integrase core domain HXV88_14905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HXV88_14905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HXV88_14910 PF02653 Branched-chain amino acid transport system / permease component HXV88_14915 PF02653 Branched-chain amino acid transport system / permease component HXV88_14920 PF00005 ABC transporter HXV88_14930 PF13438 Domain of unknown function (DUF4113) HXV88_14930 PF00817 impB/mucB/samB family HXV88_14930 PF11799 impB/mucB/samB family C-terminal domain HXV88_14930 PF11798 IMS family HHH motif HXV88_14935 PF00717 Peptidase S24-like HXV88_14950 PF01555 DNA methylase HXV88_14965 PF04002 RadC-like JAB domain HXV88_15005 PF09588 YqaJ-like viral recombinase domain HXV88_15050 PF00672 HAMP domain HXV88_15050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_15110 PF02683 Cytochrome C biogenesis protein transmembrane region HXV88_15145 PF00080 Copper/zinc superoxide dismutase (SODC) HXV88_15155 PF00199 Catalase HXV88_15155 PF06628 Catalase-related immune-responsive HXV88_15165 PF04055 Radical SAM superfamily HXV88_15165 PF13186 Iron-sulfur cluster-binding domain HXV88_15170 PF00884 Sulfatase HXV88_15195 PF05930 Prophage CP4-57 regulatory protein (AlpA) HXV88_15200 PF13148 Protein of unknown function (DUF3987) HXV88_15210 PF00239 Resolvase, N terminal domain HXV88_15210 PF02796 Helix-turn-helix domain of resolvase HXV88_15240 PF04002 RadC-like JAB domain HXV88_15275 PF04002 RadC-like JAB domain HXV88_15280 PF09618 CRISPR-associated protein (Cas_Csy4) HXV88_15285 PF09615 CRISPR-associated protein (Cas_Csy3) HXV88_15290 PF09614 CRISPR-associated protein (Cas_Csy2) HXV88_15295 PF09611 CRISPR-associated protein (Cas_Csy1) HXV88_15305 PF01867 CRISPR associated protein Cas1 HXV88_15320 PF00717 Peptidase S24-like HXV88_15325 PF11799 impB/mucB/samB family C-terminal domain HXV88_15325 PF00817 impB/mucB/samB family HXV88_15325 PF13438 Domain of unknown function (DUF4113) HXV88_15340 PF00440 Bacterial regulatory proteins, tetR family HXV88_15345 PF02770 Acyl-CoA dehydrogenase, middle domain HXV88_15345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HXV88_15345 PF09317 Domain of unknown function (DUF1974) HXV88_15345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HXV88_15350 PF00873 AcrB/AcrD/AcrF family HXV88_15360 PF02075 Crossover junction endodeoxyribonuclease RuvC HXV88_15365 PF02108 Flagellar assembly protein FliH HXV88_15370 PF06578 YOP proteins translocation protein K (YscK) HXV88_15375 PF01514 Secretory protein of YscJ/FliF family HXV88_15380 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI HXV88_15385 PF09025 YopR, type III needle-polymerisation regulator HXV88_15390 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) HXV88_15395 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF HXV88_15405 PF16693 Inner membrane component of T3SS, periplasmic domain HXV88_15405 PF16697 Inner membrane component of T3SS, cytoplasmic domain HXV88_15410 PF00263 Bacterial type II and III secretion system protein HXV88_15410 PF03958 Bacterial type II/III secretion system short domain HXV88_15415 PF05932 Tir chaperone protein (CesT) family HXV88_15425 PF12833 Helix-turn-helix domain HXV88_15430 PF09619 Type III secretion system lipoprotein chaperone (YscW) HXV88_15440 PF05932 Tir chaperone protein (CesT) family HXV88_15445 PF05844 YopD protein HXV88_15450 PF04888 Secretion system effector C (SseC) like family HXV88_15455 PF07720 Tetratricopeptide repeat HXV88_15460 PF04792 V antigen (LcrV) protein HXV88_15470 PF07216 LcrG protein HXV88_15475 PF09621 Type III secretion system regulator (LcrR) HXV88_15480 PF00771 FHIPEP family HXV88_15490 PF09474 Type III secretion system YscX (type_III_YscX) HXV88_15500 PF09059 TyeA HXV88_15505 PF07201 HrpJ-like domain HXV88_15510 PF18269 T3SS EscN ATPase C-terminal domain HXV88_15510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HXV88_15510 PF02874 ATP synthase alpha/beta family, beta-barrel domain HXV88_15520 PF02120 Flagellar hook-length control protein FliK HXV88_15525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HXV88_15530 PF00813 FliP family HXV88_15535 PF01313 Bacterial export proteins, family 3 HXV88_15540 PF01311 Bacterial export proteins, family 1 HXV88_15545 PF01312 FlhB HrpN YscU SpaS Family HXV88_15550 PF03496 ADP-ribosyltransferase exoenzyme HXV88_15570 PF00155 Aminotransferase class I and II HXV88_15575 PF00367 phosphotransferase system, EIIB HXV88_15575 PF02378 Phosphotransferase system, EIIC HXV88_15580 PF00356 Bacterial regulatory proteins, lacI family HXV88_15580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HXV88_15585 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_15585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HXV88_15590 PF13411 MerR HTH family regulatory protein HXV88_15605 PF00210 Ferritin-like domain HXV88_15630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HXV88_15630 PF02378 Phosphotransferase system, EIIC HXV88_15630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HXV88_15635 PF07690 Major Facilitator Superfamily HXV88_15640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HXV88_15650 PF00849 RNA pseudouridylate synthase HXV88_15655 PF00293 NUDIX domain HXV88_15665 PF04356 Protein of unknown function (DUF489) HXV88_15670 PF08328 Adenylosuccinate lyase C-terminal HXV88_15670 PF00206 Lyase HXV88_15675 PF08007 Cupin superfamily protein HXV88_15695 PF00043 Glutathione S-transferase, C-terminal domain HXV88_15695 PF13417 Glutathione S-transferase, N-terminal domain HXV88_15700 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HXV88_15700 PF01243 Pyridoxamine 5'-phosphate oxidase HXV88_15705 PF01189 16S rRNA methyltransferase RsmB/F HXV88_15705 PF01029 NusB family HXV88_15710 PF01042 Endoribonuclease L-PSP HXV88_15715 PF01228 Glycine radical HXV88_15715 PF02901 Pyruvate formate lyase-like HXV88_15720 PF00871 Acetokinase family HXV88_15725 PF03222 Tryptophan/tyrosine permease family HXV88_15730 PF00291 Pyridoxal-phosphate dependent enzyme HXV88_15735 PF00462 Glutaredoxin HXV88_15740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HXV88_15740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HXV88_15745 PF04333 MlaA lipoprotein HXV88_15755 PF03918 Cytochrome C biogenesis protein HXV88_15760 PF08534 Redoxin HXV88_15765 PF01578 Cytochrome C assembly protein HXV88_15765 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HXV88_15770 PF03100 CcmE HXV88_15775 PF04995 Heme exporter protein D (CcmD) HXV88_15780 PF01578 Cytochrome C assembly protein HXV88_15785 PF03379 CcmB protein HXV88_15790 PF00005 ABC transporter HXV88_15800 PF01584 CheW-like domain HXV88_15810 PF13614 AAA domain HXV88_15815 PF13677 Membrane MotB of proton-channel complex MotA/MotB HXV88_15815 PF00691 OmpA family HXV88_15820 PF01618 MotA/TolQ/ExbB proton channel family HXV88_15825 PF01339 CheB methylesterase HXV88_15825 PF00072 Response regulator receiver domain HXV88_15830 PF02895 Signal transducing histidine kinase, homodimeric domain HXV88_15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_15830 PF01627 Hpt domain HXV88_15830 PF00072 Response regulator receiver domain HXV88_15830 PF01584 CheW-like domain HXV88_15835 PF04344 Chemotaxis phosphatase, CheZ HXV88_15840 PF00072 Response regulator receiver domain HXV88_15845 PF04545 Sigma-70, region 4 HXV88_15845 PF04539 Sigma-70 region 3 HXV88_15845 PF04542 Sigma-70 region 2 HXV88_15850 PF10609 NUBPL iron-transfer P-loop NTPase HXV88_15855 PF00448 SRP54-type protein, GTPase domain HXV88_15860 PF00771 FHIPEP family HXV88_15865 PF01312 FlhB HrpN YscU SpaS Family HXV88_15870 PF01311 Bacterial export proteins, family 1 HXV88_15875 PF01313 Bacterial export proteins, family 3 HXV88_15880 PF00813 FliP family HXV88_15885 PF04347 Flagellar biosynthesis protein, FliO HXV88_15890 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HXV88_15895 PF02154 Flagellar motor switch protein FliM HXV88_15895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HXV88_15915 PF18269 T3SS EscN ATPase C-terminal domain HXV88_15915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HXV88_15925 PF14841 FliG middle domain HXV88_15925 PF14842 FliG N-terminal domain HXV88_15925 PF01706 FliG C-terminal domain HXV88_15930 PF01514 Secretory protein of YscJ/FliF family HXV88_15930 PF08345 Flagellar M-ring protein C-terminal HXV88_15935 PF02049 Flagellar hook-basal body complex protein FliE HXV88_15945 PF07969 Amidohydrolase family HXV88_15955 PF00224 Pyruvate kinase, barrel domain HXV88_15955 PF02887 Pyruvate kinase, alpha/beta domain HXV88_15960 PF01380 SIS domain HXV88_15960 PF01418 Helix-turn-helix domain, rpiR family HXV88_15965 PF02685 Glucokinase HXV88_15990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_15990 PF00672 HAMP domain HXV88_15995 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_16000 PF00860 Permease family HXV88_16010 PF16998 17 kDa outer membrane surface antigen HXV88_16010 PF05433 Glycine zipper 2TM domain HXV88_16015 PF03949 Malic enzyme, NAD binding domain HXV88_16015 PF00390 Malic enzyme, N-terminal domain HXV88_16035 PF13247 4Fe-4S dicluster domain HXV88_16040 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HXV88_16040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HXV88_16040 PF12838 4Fe-4S dicluster domain HXV88_16040 PF01568 Molydopterin dinucleotide binding domain HXV88_16040 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HXV88_16040 PF00384 Molybdopterin oxidoreductase HXV88_16040 PF00384 Molybdopterin oxidoreductase HXV88_16040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HXV88_16040 PF12838 4Fe-4S dicluster domain HXV88_16040 PF01568 Molydopterin dinucleotide binding domain HXV88_16075 PF02634 FdhD/NarQ family HXV88_16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_16085 PF00512 His Kinase A (phospho-acceptor) domain HXV88_16085 PF00989 PAS fold HXV88_16090 PF02954 Bacterial regulatory protein, Fis family HXV88_16090 PF00158 Sigma-54 interaction domain HXV88_16090 PF00072 Response regulator receiver domain HXV88_16095 PF12849 PBP superfamily domain HXV88_16100 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_16105 PF00005 ABC transporter HXV88_16110 PF12804 MobA-like NTP transferase domain HXV88_16115 PF03453 MoeA N-terminal region (domain I and II) HXV88_16115 PF00994 Probable molybdopterin binding domain HXV88_16115 PF03454 MoeA C-terminal region (domain IV) HXV88_16120 PF04632 Fusaric acid resistance protein family HXV88_16135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_16135 PF13426 PAS domain HXV88_16135 PF08447 PAS fold HXV88_16155 PF05114 Protein of unknown function (DUF692) HXV88_16165 PF10725 Protein of unknown function (DUF2517) HXV88_16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_16185 PF00512 His Kinase A (phospho-acceptor) domain HXV88_16185 PF09308 LuxQ, periplasmic HXV88_16185 PF00072 Response regulator receiver domain HXV88_16190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_16195 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_16200 PF12911 N-terminal TM domain of oligopeptide transport permease C HXV88_16200 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_16205 PF00005 ABC transporter HXV88_16205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_16210 PF00005 ABC transporter HXV88_16210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_16220 PF01869 BadF/BadG/BcrA/BcrD ATPase family HXV88_16225 PF02838 Glycosyl hydrolase family 20, domain 2 HXV88_16225 PF00728 Glycosyl hydrolase family 20, catalytic domain HXV88_16230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_16230 PF08447 PAS fold HXV88_16245 PF01396 Topoisomerase DNA binding C4 zinc finger HXV88_16245 PF01751 Toprim domain HXV88_16245 PF01131 DNA topoisomerase HXV88_16245 PF08272 Topoisomerase I zinc-ribbon-like HXV88_16250 PF04996 Succinylarginine dihydrolase HXV88_16275 PF00672 HAMP domain HXV88_16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_16275 PF00512 His Kinase A (phospho-acceptor) domain HXV88_16275 PF01627 Hpt domain HXV88_16275 PF00072 Response regulator receiver domain HXV88_16275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HXV88_16280 PF00072 Response regulator receiver domain HXV88_16280 PF00196 Bacterial regulatory proteins, luxR family HXV88_16305 PF00990 Diguanylate cyclase, GGDEF domain HXV88_16305 PF00563 EAL domain HXV88_16305 PF01590 GAF domain HXV88_16305 PF00989 PAS fold HXV88_16315 PF12838 4Fe-4S dicluster domain HXV88_16320 PF06476 Protein of unknown function (DUF1090) HXV88_16325 PF02635 DsrE/DsrF-like family HXV88_16330 PF00990 Diguanylate cyclase, GGDEF domain HXV88_16335 PF07690 Major Facilitator Superfamily HXV88_16340 PF01343 Peptidase family S49 HXV88_16340 PF08496 Peptidase family S49 N-terminal HXV88_16345 PF00106 short chain dehydrogenase HXV88_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_16350 PF03466 LysR substrate binding domain HXV88_16355 PF07690 Major Facilitator Superfamily HXV88_16360 PF00155 Aminotransferase class I and II HXV88_16380 PF01161 Phosphatidylethanolamine-binding protein HXV88_16395 PF03167 Uracil DNA glycosylase superfamily HXV88_16405 PF01228 Glycine radical HXV88_16410 PF00793 DAHP synthetase I family HXV88_16415 PF13369 Transglutaminase-like superfamily HXV88_16425 PF17827 PrmC N-terminal domain HXV88_16425 PF13847 Methyltransferase domain HXV88_16430 PF03462 PCRF domain HXV88_16430 PF00472 RF-1 domain HXV88_16435 PF01488 Shikimate / quinate 5-dehydrogenase HXV88_16435 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HXV88_16435 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HXV88_16440 PF03550 Outer membrane lipoprotein LolB HXV88_16445 PF08544 GHMP kinases C terminal HXV88_16445 PF00288 GHMP kinases N terminal domain HXV88_16455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HXV88_16455 PF14572 Phosphoribosyl synthetase-associated domain HXV88_16460 PF02872 5'-nucleotidase, C-terminal domain HXV88_16460 PF00149 Calcineurin-like phosphoesterase HXV88_16465 PF01195 Peptidyl-tRNA hydrolase HXV88_16470 PF06071 Protein of unknown function (DUF933) HXV88_16470 PF01926 50S ribosome-binding GTPase HXV88_16515 PF02080 TrkA-C domain HXV88_16515 PF03600 Citrate transporter HXV88_16520 PF04973 Nicotinamide mononucleotide transporter HXV88_16525 PF01048 Phosphorylase superfamily HXV88_16545 PF16657 Maltogenic Amylase, C-terminal domain HXV88_16545 PF00128 Alpha amylase, catalytic domain HXV88_16550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HXV88_16550 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HXV88_16550 PF10371 Domain of unknown function HXV88_16550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HXV88_16550 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HXV88_16555 PF07690 Major Facilitator Superfamily HXV88_16560 PF13419 Haloacid dehalogenase-like hydrolase HXV88_16575 PF00171 Aldehyde dehydrogenase family HXV88_16580 PF04958 Arginine N-succinyltransferase beta subunit HXV88_16585 PF00202 Aminotransferase class-III HXV88_16590 PF00117 Glutamine amidotransferase class-I HXV88_16600 PF00579 tRNA synthetases class I (W and Y) HXV88_16605 PF13419 Haloacid dehalogenase-like hydrolase HXV88_16610 PF00834 Ribulose-phosphate 3 epimerase family HXV88_16615 PF02086 D12 class N6 adenine-specific DNA methyltransferase HXV88_16625 PF01761 3-dehydroquinate synthase HXV88_16630 PF01202 Shikimate kinase HXV88_16635 PF11741 AMIN domain HXV88_16635 PF00263 Bacterial type II and III secretion system protein HXV88_16635 PF03958 Bacterial type II/III secretion system short domain HXV88_16635 PF07660 Secretin and TonB N terminus short domain HXV88_16660 PF17092 Penicillin-binding protein OB-like domain HXV88_16660 PF00912 Transglycosylase HXV88_16660 PF00905 Penicillin binding protein transpeptidase domain HXV88_16665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_16665 PF03466 LysR substrate binding domain HXV88_16670 PF00672 HAMP domain HXV88_16670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_16670 PF02743 Cache domain HXV88_16685 PF03466 LysR substrate binding domain HXV88_16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_16695 PF01551 Peptidase family M23 HXV88_16695 PF08525 Opacity-associated protein A N-terminal motif HXV88_16695 PF01476 LysM domain HXV88_16705 PF12795 Mechanosensitive ion channel porin domain HXV88_16705 PF12794 Mechanosensitive ion channel inner membrane domain 1 HXV88_16705 PF00924 Mechanosensitive ion channel HXV88_16710 PF03009 Glycerophosphoryl diester phosphodiesterase family HXV88_16715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_16715 PF00672 HAMP domain HXV88_16715 PF02743 Cache domain HXV88_16720 PF02910 Fumarate reductase flavoprotein C-term HXV88_16720 PF00890 FAD binding domain HXV88_16725 PF13085 2Fe-2S iron-sulfur cluster binding domain HXV88_16725 PF13183 4Fe-4S dicluster domain HXV88_16730 PF02300 Fumarate reductase subunit C HXV88_16735 PF02313 Fumarate reductase subunit D HXV88_16740 PF07670 Nucleoside recognition HXV88_16745 PF07670 Nucleoside recognition HXV88_16750 PF07687 Peptidase dimerisation domain HXV88_16750 PF01546 Peptidase family M20/M25/M40 HXV88_16760 PF06224 Winged helix DNA-binding domain HXV88_16765 PF17932 Tetracyclin repressor-like, C-terminal domain HXV88_16765 PF00440 Bacterial regulatory proteins, tetR family HXV88_16775 PF01266 FAD dependent oxidoreductase HXV88_16780 PF01266 FAD dependent oxidoreductase HXV88_16800 PF00501 AMP-binding enzyme HXV88_16810 PF00106 short chain dehydrogenase HXV88_16820 PF00486 Transcriptional regulatory protein, C terminal HXV88_16820 PF00072 Response regulator receiver domain HXV88_16825 PF00512 His Kinase A (phospho-acceptor) domain HXV88_16825 PF08521 Two-component sensor kinase N-terminal HXV88_16825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_16835 PF00478 IMP dehydrogenase / GMP reductase domain HXV88_16845 PF09285 Elongation factor P, C-terminal HXV88_16845 PF01132 Elongation factor P (EF-P) OB domain HXV88_16845 PF08207 Elongation factor P (EF-P) KOW-like domain HXV88_16855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HXV88_16855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HXV88_16865 PF13426 PAS domain HXV88_16865 PF00563 EAL domain HXV88_16865 PF00990 Diguanylate cyclase, GGDEF domain HXV88_16865 PF05231 MASE1 HXV88_16865 PF08447 PAS fold HXV88_16865 PF08448 PAS fold HXV88_16875 PF13419 Haloacid dehalogenase-like hydrolase HXV88_16885 PF03466 LysR substrate binding domain HXV88_16885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_16890 PF00990 Diguanylate cyclase, GGDEF domain HXV88_16890 PF05230 MASE2 domain HXV88_16895 PF00313 'Cold-shock' DNA-binding domain HXV88_16900 PF00857 Isochorismatase family HXV88_16905 PF01494 FAD binding domain HXV88_16910 PF04055 Radical SAM superfamily HXV88_16910 PF01938 TRAM domain HXV88_16910 PF00919 Uncharacterized protein family UPF0004 HXV88_16915 PF02562 PhoH-like protein HXV88_16920 PF02130 Uncharacterized protein family UPF0054 HXV88_16925 PF03471 Transporter associated domain HXV88_16925 PF00571 CBS domain HXV88_16930 PF00795 Carbon-nitrogen hydrolase HXV88_16935 PF13411 MerR HTH family regulatory protein HXV88_16940 PF17768 RecJ OB domain HXV88_16940 PF01368 DHH family HXV88_16940 PF02272 DHHA1 domain HXV88_16950 PF01741 Large-conductance mechanosensitive channel, MscL HXV88_16955 PF02899 Phage integrase, N-terminal SAM-like domain HXV88_16955 PF00589 Phage integrase family HXV88_16960 PF00258 Flavodoxin HXV88_16965 PF01523 Putative modulator of DNA gyrase HXV88_16970 PF01523 Putative modulator of DNA gyrase HXV88_16975 PF07295 Zinc-ribbon containing domain HXV88_16980 PF08264 Anticodon-binding domain of tRNA HXV88_16980 PF00133 tRNA synthetases class I (I, L, M and V) HXV88_16980 PF13603 Leucyl-tRNA synthetase, Domain 2 HXV88_16995 PF01467 Cytidylyltransferase-like HXV88_17005 PF02590 Predicted SPOUT methyltransferase HXV88_17010 PF03717 Penicillin-binding Protein dimerisation domain HXV88_17010 PF00905 Penicillin binding protein transpeptidase domain HXV88_17015 PF01098 Cell cycle protein HXV88_17020 PF13406 Transglycosylase SLT domain HXV88_17025 PF03330 Lytic transglycolase HXV88_17025 PF05036 Sporulation related domain HXV88_17030 PF07943 Penicillin-binding protein 5, C-terminal domain HXV88_17030 PF00768 D-alanyl-D-alanine carboxypeptidase HXV88_17035 PF04359 Protein of unknown function (DUF493) HXV88_17040 PF03099 Biotin/lipoate A/B protein ligase family HXV88_17045 PF04055 Radical SAM superfamily HXV88_17045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HXV88_17060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HXV88_17060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HXV88_17065 PF07023 Protein of unknown function (DUF1315) HXV88_17070 PF17763 Glutaminase/Asparaginase C-terminal domain HXV88_17070 PF00710 Asparaginase, N-terminal HXV88_17075 PF03616 Sodium/glutamate symporter HXV88_17080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_17080 PF00672 HAMP domain HXV88_17080 PF02743 Cache domain HXV88_17090 PF00152 tRNA synthetases class II (D, K and N) HXV88_17090 PF01336 OB-fold nucleic acid binding domain HXV88_17095 PF00667 FAD binding domain HXV88_17095 PF00258 Flavodoxin HXV88_17095 PF00175 Oxidoreductase NAD-binding domain HXV88_17100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HXV88_17100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HXV88_17105 PF01507 Phosphoadenosine phosphosulfate reductase family HXV88_17110 PF00186 Dihydrofolate reductase HXV88_17115 PF12821 Threonine/Serine exporter, ThrE HXV88_17120 PF06738 Putative threonine/serine exporter HXV88_17130 PF00994 Probable molybdopterin binding domain HXV88_17140 PF06004 Bacterial protein of unknown function (DUF903) HXV88_17145 PF00581 Rhodanese-like domain HXV88_17150 PF04960 Glutaminase HXV88_17155 PF04320 Protein with unknown function (DUF469) HXV88_17160 PF02390 Putative methyltransferase HXV88_17165 PF00155 Aminotransferase class I and II HXV88_17170 PF00563 EAL domain HXV88_17170 PF12792 CSS motif domain associated with EAL HXV88_17175 PF01370 NAD dependent epimerase/dehydratase family HXV88_17175 PF08338 Domain of unknown function (DUF1731) HXV88_17185 PF00005 ABC transporter HXV88_17190 PF13472 GDSL-like Lipase/Acylhydrolase family HXV88_17195 PF01584 CheW-like domain HXV88_17195 PF00072 Response regulator receiver domain HXV88_17200 PF06483 Chitinase C HXV88_17200 PF00704 Glycosyl hydrolases family 18 HXV88_17235 PF18416 N-acetylglucosamine binding protein domain 2 HXV88_17235 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HXV88_17240 PF12561 ToxR activated gene A lipoprotein domain HXV88_17240 PF17945 Beta/Gamma crystallin HXV88_17245 PF00704 Glycosyl hydrolases family 18 HXV88_17245 PF08329 Chitinase A, N-terminal domain HXV88_17250 PF00990 Diguanylate cyclase, GGDEF domain HXV88_17250 PF08448 PAS fold HXV88_17255 PF00704 Glycosyl hydrolases family 18 HXV88_17255 PF08329 Chitinase A, N-terminal domain HXV88_17260 PF00512 His Kinase A (phospho-acceptor) domain HXV88_17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_17260 PF00672 HAMP domain HXV88_17260 PF00072 Response regulator receiver domain HXV88_17260 PF01627 Hpt domain HXV88_17260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HXV88_17270 PF13443 Cro/C1-type HTH DNA-binding domain HXV88_17280 PF12832 MFS_1 like family HXV88_17300 PF04717 Type VI secretion system, phage-baseplate injector HXV88_17305 PF05638 Type VI secretion system effector, Hcp HXV88_17315 PF07715 TonB-dependent Receptor Plug Domain HXV88_17315 PF00593 TonB dependent receptor HXV88_17335 PF01243 Pyridoxamine 5'-phosphate oxidase HXV88_17340 PF06228 Haem utilisation ChuX/HutX HXV88_17350 PF01032 FecCD transport family HXV88_17355 PF00005 ABC transporter HXV88_17365 PF03575 Peptidase family S51 HXV88_17370 PF01894 Uncharacterised protein family UPF0047 HXV88_17375 PF01168 Alanine racemase, N-terminal domain HXV88_17375 PF00842 Alanine racemase, C-terminal domain HXV88_17380 PF03796 DnaB-like helicase C terminal domain HXV88_17380 PF00772 DnaB-like helicase N terminal domain HXV88_17390 PF00149 Calcineurin-like phosphoesterase HXV88_17390 PF02872 5'-nucleotidase, C-terminal domain HXV88_17410 PF00158 Sigma-54 interaction domain HXV88_17410 PF00072 Response regulator receiver domain HXV88_17410 PF02954 Bacterial regulatory protein, Fis family HXV88_17415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HXV88_17415 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HXV88_17425 PF04102 SlyX HXV88_17430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HXV88_17435 PF09526 Probable metal-binding protein (DUF2387) HXV88_17445 PF00072 Response regulator receiver domain HXV88_17445 PF01584 CheW-like domain HXV88_17450 PF00561 alpha/beta hydrolase fold HXV88_17455 PF00360 Phytochrome region HXV88_17455 PF00990 Diguanylate cyclase, GGDEF domain HXV88_17455 PF01590 GAF domain HXV88_17455 PF00563 EAL domain HXV88_17460 PF06794 Uncharacterised protein family (UPF0270) HXV88_17465 PF00485 Phosphoribulokinase / Uridine kinase family HXV88_17480 PF02566 OsmC-like protein HXV88_17485 PF13545 Crp-like helix-turn-helix domain HXV88_17485 PF00027 Cyclic nucleotide-binding domain HXV88_17490 PF08241 Methyltransferase domain HXV88_17495 PF00267 Gram-negative porin HXV88_17505 PF00582 Universal stress protein family HXV88_17520 PF00294 pfkB family carbohydrate kinase HXV88_17525 PF04227 Indigoidine synthase A like protein HXV88_17555 PF00550 Phosphopantetheine attachment site HXV88_17560 PF00550 Phosphopantetheine attachment site HXV88_17570 PF13193 AMP-binding enzyme C-terminal domain HXV88_17570 PF00501 AMP-binding enzyme HXV88_17575 PF07977 FabA-like domain HXV88_17585 PF00221 Aromatic amino acid lyase HXV88_17610 PF02801 Beta-ketoacyl synthase, C-terminal domain HXV88_17610 PF00109 Beta-ketoacyl synthase, N-terminal domain HXV88_17615 PF07977 FabA-like domain HXV88_17625 PF02801 Beta-ketoacyl synthase, C-terminal domain HXV88_17625 PF00109 Beta-ketoacyl synthase, N-terminal domain HXV88_17630 PF12464 Maltose acetyltransferase HXV88_17630 PF14602 Hexapeptide repeat of succinyl-transferase HXV88_17635 PF00881 Nitroreductase family HXV88_17640 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_17640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HXV88_17645 PF01343 Peptidase family S49 HXV88_17650 PF17969 L,D-transpeptidase C-terminal domain HXV88_17650 PF03734 L,D-transpeptidase catalytic domain HXV88_17665 PF02472 Biopolymer transport protein ExbD/TolR HXV88_17670 PF01618 MotA/TolQ/ExbB proton channel family HXV88_17675 PF01618 MotA/TolQ/ExbB proton channel family HXV88_17685 PF07715 TonB-dependent Receptor Plug Domain HXV88_17685 PF00593 TonB dependent receptor HXV88_17690 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_17695 PF12911 N-terminal TM domain of oligopeptide transport permease C HXV88_17695 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_17705 PF00005 ABC transporter HXV88_17705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_17710 PF00005 ABC transporter HXV88_17710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HXV88_17720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HXV88_17720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HXV88_17720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HXV88_17725 PF01370 NAD dependent epimerase/dehydratase family HXV88_17730 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) HXV88_17740 PF01464 Transglycosylase SLT domain HXV88_17755 PF00005 ABC transporter HXV88_17755 PF12848 ABC transporter HXV88_17765 PF00860 Permease family HXV88_17770 PF00749 tRNA synthetases class I (E and Q), catalytic domain HXV88_17775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_17775 PF00672 HAMP domain HXV88_17785 PF00313 'Cold-shock' DNA-binding domain HXV88_17825 PF00929 Exonuclease HXV88_17830 PF03193 RsgA GTPase HXV88_17835 PF02666 Phosphatidylserine decarboxylase HXV88_17840 PF09905 DNA-binding protein VF530 HXV88_17860 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HXV88_17865 PF11967 Recombination protein O N terminal HXV88_17865 PF02565 Recombination protein O C terminal HXV88_17870 PF07650 KH domain HXV88_17870 PF01926 50S ribosome-binding GTPase HXV88_17875 PF14622 Ribonuclease-III-like HXV88_17875 PF00035 Double-stranded RNA binding motif HXV88_17880 PF10502 Signal peptidase, peptidase S26 HXV88_17885 PF06421 GTP-binding protein LepA C-terminus HXV88_17885 PF00009 Elongation factor Tu GTP binding domain HXV88_17885 PF03144 Elongation factor Tu domain 2 HXV88_17885 PF00679 Elongation factor G C-terminus HXV88_17895 PF03888 MucB/RseB N-terminal domain HXV88_17895 PF17188 MucB/RseB C-terminal domain HXV88_17900 PF03872 Anti sigma-E protein RseA, N-terminal domain HXV88_17900 PF03873 Anti sigma-E protein RseA, C-terminal domain HXV88_17905 PF04542 Sigma-70 region 2 HXV88_17905 PF08281 Sigma-70, region 4 HXV88_17910 PF02910 Fumarate reductase flavoprotein C-term HXV88_17910 PF00890 FAD binding domain HXV88_17920 PF03937 Flavinator of succinate dehydrogenase HXV88_17925 PF01571 Aminomethyltransferase folate-binding domain HXV88_17930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_17930 PF03466 LysR substrate binding domain HXV88_17945 PF03091 CutA1 divalent ion tolerance protein HXV88_17950 PF11412 Disulphide bond corrector protein DsbC HXV88_17950 PF02683 Cytochrome C biogenesis protein transmembrane region HXV88_17970 PF01266 FAD dependent oxidoreductase HXV88_17975 PF01116 Fructose-bisphosphate aldolase class-II HXV88_17980 PF00162 Phosphoglycerate kinase HXV88_17985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HXV88_17985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HXV88_17990 PF00480 ROK family HXV88_17995 PF01208 Uroporphyrinogen decarboxylase (URO-D) HXV88_18000 PF00293 NUDIX domain HXV88_18000 PF09297 NADH pyrophosphatase zinc ribbon domain HXV88_18005 PF01619 Proline dehydrogenase HXV88_18005 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HXV88_18005 PF14850 DNA-binding domain of Proline dehydrogenase HXV88_18005 PF00171 Aldehyde dehydrogenase family HXV88_18010 PF08239 Bacterial SH3 domain HXV88_18015 PF00027 Cyclic nucleotide-binding domain HXV88_18015 PF00520 Ion transport protein HXV88_18020 PF00672 HAMP domain HXV88_18020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_18030 PF08335 GlnD PII-uridylyltransferase HXV88_18030 PF03710 Glutamate-ammonia ligase adenylyltransferase HXV88_18050 PF00486 Transcriptional regulatory protein, C terminal HXV88_18050 PF00072 Response regulator receiver domain HXV88_18065 PF00293 NUDIX domain HXV88_18065 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HXV88_18065 PF09297 NADH pyrophosphatase zinc ribbon domain HXV88_18090 PF03060 Nitronate monooxygenase HXV88_18100 PF00445 Ribonuclease T2 family HXV88_18110 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase HXV88_18120 PF00990 Diguanylate cyclase, GGDEF domain HXV88_18125 PF00270 DEAD/DEAH box helicase HXV88_18125 PF00271 Helicase conserved C-terminal domain HXV88_18135 PF00753 Metallo-beta-lactamase superfamily HXV88_18155 PF01425 Amidase HXV88_18160 PF04371 Porphyromonas-type peptidyl-arginine deiminase HXV88_18165 PF03466 LysR substrate binding domain HXV88_18165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_18175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HXV88_18180 PF04545 Sigma-70, region 4 HXV88_18180 PF04539 Sigma-70 region 3 HXV88_18180 PF04542 Sigma-70 region 2 HXV88_18180 PF00140 Sigma-70 factor, region 1.2 HXV88_18185 PF01551 Peptidase family M23 HXV88_18185 PF01476 LysM domain HXV88_18190 PF09335 SNARE associated Golgi protein HXV88_18200 PF01975 Survival protein SurE HXV88_18205 PF01142 tRNA pseudouridine synthase D (TruD) HXV88_18210 PF02542 YgbB family HXV88_18215 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HXV88_18220 PF04977 Septum formation initiator HXV88_18225 PF00474 Sodium:solute symporter family HXV88_18235 PF03734 L,D-transpeptidase catalytic domain HXV88_18235 PF17969 L,D-transpeptidase C-terminal domain HXV88_18240 PF00924 Mechanosensitive ion channel HXV88_18245 PF00871 Acetokinase family HXV88_18250 PF04074 YhcH/YjgK/YiaL HXV88_18260 PF01177 Asp/Glu/Hydantoin racemase HXV88_18265 PF01810 LysE type translocator HXV88_18275 PF00155 Aminotransferase class I and II HXV88_18275 PF00392 Bacterial regulatory proteins, gntR family HXV88_18290 PF02272 DHHA1 domain HXV88_18290 PF01368 DHH family HXV88_18290 PF01743 Poly A polymerase head domain HXV88_18290 PF00571 CBS domain HXV88_18330 PF00005 ABC transporter HXV88_18330 PF12848 ABC transporter HXV88_18340 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HXV88_18380 PF00561 alpha/beta hydrolase fold HXV88_18385 PF03952 Enolase, N-terminal domain HXV88_18385 PF00113 Enolase, C-terminal TIM barrel domain HXV88_18390 PF00117 Glutamine amidotransferase class-I HXV88_18390 PF06418 CTP synthase N-terminus HXV88_18395 PF03819 MazG nucleotide pyrophosphohydrolase domain HXV88_18400 PF04607 Region found in RelA / SpoT proteins HXV88_18400 PF13291 ACT domain HXV88_18400 PF02824 TGS domain HXV88_18405 PF01938 TRAM domain HXV88_18405 PF05958 tRNA (Uracil-5-)-methyltransferase HXV88_18410 PF01627 Hpt domain HXV88_18410 PF00072 Response regulator receiver domain HXV88_18410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HXV88_18410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_18410 PF00672 HAMP domain HXV88_18410 PF00512 His Kinase A (phospho-acceptor) domain HXV88_18415 PF07308 Protein of unknown function (DUF1456) HXV88_18420 PF01510 N-acetylmuramoyl-L-alanine amidase HXV88_18425 PF00210 Ferritin-like domain HXV88_18430 PF03063 Prismane/CO dehydrogenase family HXV88_18435 PF00175 Oxidoreductase NAD-binding domain HXV88_18435 PF00111 2Fe-2S iron-sulfur cluster binding domain HXV88_18435 PF00970 Oxidoreductase FAD-binding domain HXV88_18440 PF01370 NAD dependent epimerase/dehydratase family HXV88_18445 PF01569 PAP2 superfamily HXV88_18450 PF02875 Mur ligase family, glutamate ligase domain HXV88_18450 PF01225 Mur ligase family, catalytic domain HXV88_18450 PF08245 Mur ligase middle domain HXV88_18455 PF02441 Flavoprotein HXV88_18460 PF00440 Bacterial regulatory proteins, tetR family HXV88_18465 PF00156 Phosphoribosyl transferase domain HXV88_18470 PF00005 ABC transporter HXV88_18475 PF01061 ABC-2 type transporter HXV88_18505 PF02569 Pantoate-beta-alanine ligase HXV88_18510 PF02548 Ketopantoate hydroxymethyltransferase HXV88_18515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HXV88_18520 PF12627 Probable RNA and SrmB- binding site of polymerase A HXV88_18520 PF01743 Poly A polymerase head domain HXV88_18520 PF12626 Polymerase A arginine-rich C-terminus HXV88_18525 PF00749 tRNA synthetases class I (E and Q), catalytic domain HXV88_18530 PF01258 Prokaryotic dksA/traR C4-type zinc finger HXV88_18535 PF03749 Sugar fermentation stimulation protein RE domain HXV88_18535 PF17746 SfsA N-terminal OB domain HXV88_18545 PF04408 Helicase associated domain (HA2) HXV88_18545 PF00270 DEAD/DEAH box helicase HXV88_18545 PF08482 ATP-dependent helicase C-terminal HXV88_18545 PF00271 Helicase conserved C-terminal domain HXV88_18550 PF14814 Bifunctional transglycosylase second domain HXV88_18550 PF00912 Transglycosylase HXV88_18550 PF00905 Penicillin binding protein transpeptidase domain HXV88_18555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HXV88_18560 PF00893 Small Multidrug Resistance protein HXV88_18565 PF00893 Small Multidrug Resistance protein HXV88_18575 PF11849 Domain of unknown function (DUF3369) HXV88_18580 PF00719 Inorganic pyrophosphatase HXV88_18595 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HXV88_18610 PF00005 ABC transporter HXV88_18630 PF08447 PAS fold HXV88_18630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_18645 PF02080 TrkA-C domain HXV88_18645 PF03600 Citrate transporter HXV88_18650 PF00009 Elongation factor Tu GTP binding domain HXV88_18655 PF01507 Phosphoadenosine phosphosulfate reductase family HXV88_18660 PF14824 Sirohaem biosynthesis protein central HXV88_18660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HXV88_18660 PF10414 Sirohaem synthase dimerisation region HXV88_18665 PF01145 SPFH domain / Band 7 family HXV88_18665 PF16200 C-terminal region of band_7 HXV88_18670 PF01957 NfeD-like C-terminal, partner-binding HXV88_18675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_18675 PF00672 HAMP domain HXV88_18680 PF02445 Quinolinate synthetase A protein HXV88_18685 PF01263 Aldose 1-epimerase HXV88_18690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HXV88_18690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HXV88_18695 PF02446 4-alpha-glucanotransferase HXV88_18700 PF00128 Alpha amylase, catalytic domain HXV88_18700 PF02806 Alpha amylase, C-terminal all-beta domain HXV88_18700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HXV88_18705 PF00128 Alpha amylase, catalytic domain HXV88_18705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HXV88_18710 PF01641 SelR domain HXV88_18720 PF00293 NUDIX domain HXV88_18735 PF01037 Lrp/AsnC ligand binding domain HXV88_18745 PF07690 Major Facilitator Superfamily HXV88_18765 PF00209 Sodium:neurotransmitter symporter family HXV88_18775 PF00209 Sodium:neurotransmitter symporter family HXV88_18840 PF16331 TolA binding protein trimerisation HXV88_18840 PF13174 Tetratricopeptide repeat HXV88_18845 PF00691 OmpA family HXV88_18850 PF07676 WD40-like Beta Propeller Repeat HXV88_18850 PF04052 TolB amino-terminal domain HXV88_18860 PF02472 Biopolymer transport protein ExbD/TolR HXV88_18865 PF01618 MotA/TolQ/ExbB proton channel family HXV88_18870 PF03061 Thioesterase superfamily HXV88_18875 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HXV88_18880 PF08173 Membrane bound YbgT-like protein HXV88_18885 PF02322 Cytochrome bd terminal oxidase subunit II HXV88_18890 PF01654 Cytochrome bd terminal oxidase subunit I HXV88_18895 PF17864 RuvB AAA lid domain HXV88_18895 PF05491 RuvB C-terminal winged helix domain HXV88_18895 PF05496 Holliday junction DNA helicase RuvB P-loop domain HXV88_18900 PF07499 RuvA, C-terminal domain HXV88_18900 PF01330 RuvA N terminal domain HXV88_18905 PF00672 HAMP domain HXV88_18905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_18910 PF01810 LysE type translocator HXV88_18920 PF00765 Autoinducer synthase HXV88_18925 PF03466 LysR substrate binding domain HXV88_18925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_18930 PF17876 Cold shock domain HXV88_18930 PF00773 RNB domain HXV88_18930 PF08206 Ribonuclease B OB domain HXV88_18935 PF00563 EAL domain HXV88_18935 PF00360 Phytochrome region HXV88_18935 PF00990 Diguanylate cyclase, GGDEF domain HXV88_18935 PF01590 GAF domain HXV88_18945 PF13419 Haloacid dehalogenase-like hydrolase HXV88_18950 PF17209 Hfq protein HXV88_18955 PF04403 Paraquat-inducible protein A HXV88_18960 PF02470 MlaD protein HXV88_18965 PF03886 ABC-type transport auxiliary lipoprotein component HXV88_18970 PF05958 tRNA (Uracil-5-)-methyltransferase HXV88_18970 PF01938 TRAM domain HXV88_18975 PF04073 Aminoacyl-tRNA editing domain HXV88_18975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HXV88_18975 PF03129 Anticodon binding domain HXV88_18980 PF00106 short chain dehydrogenase HXV88_18995 PF00378 Enoyl-CoA hydratase/isomerase HXV88_19000 PF10952 Protein of unknown function (DUF2753) HXV88_19005 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_19015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HXV88_19025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_19025 PF08447 PAS fold HXV88_19045 PF02082 Transcriptional regulator HXV88_19050 PF00970 Oxidoreductase FAD-binding domain HXV88_19050 PF00042 Globin HXV88_19050 PF00175 Oxidoreductase NAD-binding domain HXV88_19055 PF08238 Sel1 repeat HXV88_19060 PF00056 lactate/malate dehydrogenase, NAD binding domain HXV88_19060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HXV88_19065 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_19070 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_19075 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_19080 PF00005 ABC transporter HXV88_19085 PF01316 Arginine repressor, DNA binding domain HXV88_19085 PF02863 Arginine repressor, C-terminal domain HXV88_19090 PF04261 Dyp-type peroxidase family HXV88_19095 PF00005 ABC transporter HXV88_19095 PF08402 TOBE domain HXV88_19105 PF13416 Bacterial extracellular solute-binding protein HXV88_19110 PF00543 Nitrogen regulatory protein P-II HXV88_19115 PF00472 RF-1 domain HXV88_19120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HXV88_19120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HXV88_19130 PF03883 Peroxide stress protein YaaA HXV88_19135 PF00437 Type II/IV secretion system protein HXV88_19140 PF00437 Type II/IV secretion system protein HXV88_19145 PF01168 Alanine racemase, N-terminal domain HXV88_19150 PF03807 NADP oxidoreductase coenzyme F420-dependent HXV88_19150 PF14748 Pyrroline-5-carboxylate reductase dimerisation HXV88_19155 PF02325 YGGT family HXV88_19160 PF02594 Uncharacterised ACR, YggU family COG1872 HXV88_19170 PF07670 Nucleoside recognition HXV88_19170 PF07662 Na+ dependent nucleoside transporter C-terminus HXV88_19170 PF01773 Na+ dependent nucleoside transporter N-terminus HXV88_19175 PF03466 LysR substrate binding domain HXV88_19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_19180 PF00255 Glutathione peroxidase HXV88_19195 PF01207 Dihydrouridine synthase (Dus) HXV88_19200 PF01475 Ferric uptake regulator family HXV88_19215 PF05525 Branched-chain amino acid transport protein HXV88_19220 PF05525 Branched-chain amino acid transport protein HXV88_19225 PF05175 Methyltransferase small domain HXV88_19230 PF00271 Helicase conserved C-terminal domain HXV88_19230 PF00270 DEAD/DEAH box helicase HXV88_19235 PF13673 Acetyltransferase (GNAT) domain HXV88_19245 PF00588 SpoU rRNA Methylase family HXV88_19245 PF08032 RNA 2'-O ribose methyltransferase substrate binding HXV88_19250 PF00773 RNB domain HXV88_19250 PF00575 S1 RNA binding domain HXV88_19250 PF08206 Ribonuclease B OB domain HXV88_19250 PF08461 Ribonuclease R winged-helix domain HXV88_19250 PF17876 Cold shock domain HXV88_19255 PF00990 Diguanylate cyclase, GGDEF domain HXV88_19260 PF00691 OmpA family HXV88_19260 PF01389 OmpA-like transmembrane domain HXV88_19265 PF00657 GDSL-like Lipase/Acylhydrolase HXV88_19270 PF04076 Bacterial OB fold (BOF) protein HXV88_19275 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HXV88_19275 PF01464 Transglycosylase SLT domain HXV88_19280 PF04362 Bacterial Fe(2+) trafficking HXV88_19285 PF10576 Iron-sulfur binding domain of endonuclease III HXV88_19285 PF00633 Helix-hairpin-helix motif HXV88_19285 PF14815 NUDIX domain HXV88_19285 PF00730 HhH-GPD superfamily base excision DNA repair protein HXV88_19290 PF12627 Probable RNA and SrmB- binding site of polymerase A HXV88_19290 PF01743 Poly A polymerase head domain HXV88_19290 PF01966 HD domain HXV88_19295 PF02028 BCCT, betaine/carnitine/choline family transporter HXV88_19310 PF02595 Glycerate kinase family HXV88_19315 PF02447 GntP family permease HXV88_19320 PF05651 Putative sugar diacid recognition HXV88_19320 PF17853 GGDEF-like domain HXV88_19320 PF13556 PucR C-terminal helix-turn-helix domain HXV88_19325 PF06062 Uncharacterised protein family (UPF0231) HXV88_19345 PF03372 Endonuclease/Exonuclease/phosphatase family HXV88_19355 PF00270 DEAD/DEAH box helicase HXV88_19355 PF00271 Helicase conserved C-terminal domain HXV88_19365 PF08534 Redoxin HXV88_19370 PF00403 Heavy-metal-associated domain HXV88_19375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HXV88_19375 PF11852 Domain of unknown function (DUF3372) HXV88_19375 PF03714 Bacterial pullanase-associated domain HXV88_19375 PF18494 Pullulanase Ins domain HXV88_19375 PF17967 Pullulanase N2 domain HXV88_19390 PF02583 Metal-sensitive transcriptional repressor HXV88_19395 PF00155 Aminotransferase class I and II HXV88_19400 PF03466 LysR substrate binding domain HXV88_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_19410 PF04055 Radical SAM superfamily HXV88_19415 PF11230 Protein of unknown function (DUF3029) HXV88_19440 PF00175 Oxidoreductase NAD-binding domain HXV88_19440 PF00970 Oxidoreductase FAD-binding domain HXV88_19440 PF00111 2Fe-2S iron-sulfur cluster binding domain HXV88_19455 PF00535 Glycosyl transferase family 2 HXV88_19460 PF01522 Polysaccharide deacetylase HXV88_19460 PF14883 Hypothetical glycosyl hydrolase family 13 HXV88_19475 PF12729 Four helix bundle sensory module for signal transduction HXV88_19475 PF00672 HAMP domain HXV88_19475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_19480 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HXV88_19480 PF18416 N-acetylglucosamine binding protein domain 2 HXV88_19485 PF13194 Domain of unknown function (DUF4010) HXV88_19490 PF12464 Maltose acetyltransferase HXV88_19490 PF14602 Hexapeptide repeat of succinyl-transferase HXV88_19505 PF13419 Haloacid dehalogenase-like hydrolase HXV88_19510 PF00293 NUDIX domain HXV88_19515 PF00459 Inositol monophosphatase family HXV88_19525 PF03222 Tryptophan/tyrosine permease family HXV88_19530 PF01588 Putative tRNA binding domain HXV88_19535 PF12833 Helix-turn-helix domain HXV88_19535 PF02311 AraC-like ligand binding domain HXV88_19540 PF01340 Met Apo-repressor, MetJ HXV88_19545 PF01053 Cys/Met metabolism PLP-dependent enzyme HXV88_19550 PF00742 Homoserine dehydrogenase HXV88_19550 PF03447 Homoserine dehydrogenase, NAD binding domain HXV88_19550 PF00696 Amino acid kinase family HXV88_19555 PF01384 Phosphate transporter family HXV88_19560 PF01865 Protein of unknown function DUF47 HXV88_19570 PF00701 Dihydrodipicolinate synthetase family HXV88_19575 PF05175 Methyltransferase small domain HXV88_19575 PF08468 Methyltransferase small domain N-terminal HXV88_19580 PF00483 Nucleotidyl transferase HXV88_19585 PF08323 Starch synthase catalytic domain HXV88_19585 PF00534 Glycosyl transferases group 1 HXV88_19625 PF03553 Na+/H+ antiporter family HXV88_19630 PF01521 Iron-sulphur cluster biosynthesis HXV88_19640 PF00654 Voltage gated chloride channel HXV88_19645 PF00202 Aminotransferase class-III HXV88_19660 PF13462 Thioredoxin HXV88_19660 PF06965 Na+/H+ antiporter 1 HXV88_19680 PF00271 Helicase conserved C-terminal domain HXV88_19735 PF04002 RadC-like JAB domain HXV88_19765 PF02796 Helix-turn-helix domain of resolvase HXV88_19765 PF00239 Resolvase, N terminal domain HXV88_19770 PF05930 Prophage CP4-57 regulatory protein (AlpA) HXV88_19785 PF05638 Type VI secretion system effector, Hcp HXV88_19795 PF04717 Type VI secretion system, phage-baseplate injector HXV88_19830 PF00589 Phage integrase family HXV88_19830 PF13356 Arm DNA-binding domain HXV88_19860 PF07883 Cupin domain HXV88_19860 PF01381 Helix-turn-helix HXV88_19865 PF03594 Benzoate membrane transport protein HXV88_19875 PF02219 Methylenetetrahydrofolate reductase HXV88_19890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_19890 PF00672 HAMP domain HXV88_19895 PF03922 OmpW family HXV88_19900 PF17158 Membrane-associated sensor, integral membrane domain HXV88_19900 PF00990 Diguanylate cyclase, GGDEF domain HXV88_19905 PF17760 UvrA interaction domain HXV88_19905 PF00005 ABC transporter HXV88_19905 PF17755 UvrA DNA-binding domain HXV88_19925 PF03783 Curli production assembly/transport component CsgG HXV88_19935 PF10627 Curli assembly protein CsgE HXV88_19940 PF00196 Bacterial regulatory proteins, luxR family HXV88_19945 PF00436 Single-strand binding protein family HXV88_19955 PF01545 Cation efflux family HXV88_19955 PF16916 Dimerisation domain of Zinc Transporter HXV88_19965 PF00313 'Cold-shock' DNA-binding domain HXV88_19970 PF00860 Permease family HXV88_19975 PF02733 Dak1 domain HXV88_19980 PF02734 DAK2 domain HXV88_19985 PF00381 PTS HPr component phosphorylation site HXV88_19985 PF00391 PEP-utilising enzyme, mobile domain HXV88_19985 PF03610 PTS system fructose IIA component HXV88_19985 PF05524 PEP-utilising enzyme, N-terminal HXV88_19990 PF00465 Iron-containing alcohol dehydrogenase HXV88_19995 PF00989 PAS fold HXV88_19995 PF02954 Bacterial regulatory protein, Fis family HXV88_19995 PF00158 Sigma-54 interaction domain HXV88_20005 PF01594 AI-2E family transporter HXV88_20010 PF00293 NUDIX domain HXV88_20020 PF01479 S4 domain HXV88_20025 PF01430 Hsp33 protein HXV88_20035 PF00392 Bacterial regulatory proteins, gntR family HXV88_20040 PF00557 Metallopeptidase family M24 HXV88_20040 PF01321 Creatinase/Prolidase N-terminal domain HXV88_20045 PF11756 Nitrous oxide-stimulated promoter HXV88_20050 PF00583 Acetyltransferase (GNAT) family HXV88_20055 PF05433 Glycine zipper 2TM domain HXV88_20060 PF00909 Ammonium Transporter Family HXV88_20065 PF00990 Diguanylate cyclase, GGDEF domain HXV88_20075 PF06055 Exopolysaccharide synthesis, ExoD HXV88_20085 PF17151 Periplasmic sensor domain HXV88_20085 PF00990 Diguanylate cyclase, GGDEF domain HXV88_20095 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_20125 PF04055 Radical SAM superfamily HXV88_20125 PF06968 Biotin and Thiamin Synthesis associated domain HXV88_20130 PF05690 Thiazole biosynthesis protein ThiG HXV88_20140 PF00899 ThiF family HXV88_20145 PF02581 Thiamine monophosphate synthase HXV88_20150 PF13667 ThiC-associated domain HXV88_20150 PF01964 Radical SAM ThiC family HXV88_20155 PF01117 Aerolysin toxin HXV88_20155 PF03440 Aerolysin/Pertussis toxin (APT) domain HXV88_20170 PF00486 Transcriptional regulatory protein, C terminal HXV88_20170 PF00072 Response regulator receiver domain HXV88_20175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_20180 PF08443 RimK-like ATP-grasp domain HXV88_20180 PF18030 RimK PreATP-grasp domain HXV88_20190 PF00809 Pterin binding enzyme HXV88_20190 PF02310 B12 binding domain HXV88_20190 PF02574 Homocysteine S-methyltransferase HXV88_20190 PF02965 Vitamin B12 dependent methionine synthase, activation domain HXV88_20190 PF02607 B12 binding domain HXV88_20195 PF00999 Sodium/hydrogen exchanger family HXV88_20220 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HXV88_20230 PF07690 Major Facilitator Superfamily HXV88_20235 PF01914 MarC family integral membrane protein HXV88_20245 PF01523 Putative modulator of DNA gyrase HXV88_20250 PF00795 Carbon-nitrogen hydrolase HXV88_20260 PF13116 Protein of unknown function HXV88_20260 PF13502 AsmA-like C-terminal region HXV88_20265 PF00575 S1 RNA binding domain HXV88_20265 PF10150 Ribonuclease E/G family HXV88_20270 PF02545 Maf-like protein HXV88_20275 PF04093 rod shape-determining protein MreD HXV88_20280 PF04085 rod shape-determining protein MreC HXV88_20310 PF00114 Pilin (bacterial filament) HXV88_20310 PF07963 Prokaryotic N-terminal methylation motif HXV88_20315 PF07963 Prokaryotic N-terminal methylation motif HXV88_20315 PF00114 Pilin (bacterial filament) HXV88_20330 PF00482 Type II secretion system (T2SS), protein F HXV88_20335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HXV88_20335 PF00437 Type II/IV secretion system protein HXV88_20350 PF03958 Bacterial type II/III secretion system short domain HXV88_20350 PF00263 Bacterial type II and III secretion system protein HXV88_20380 PF00563 EAL domain HXV88_20380 PF17157 Gammaproteobacterial periplasmic sensor domain HXV88_20380 PF00990 Diguanylate cyclase, GGDEF domain HXV88_20385 PF12792 CSS motif domain associated with EAL HXV88_20385 PF00563 EAL domain HXV88_20390 PF01699 Sodium/calcium exchanger protein HXV88_20395 PF00221 Aromatic amino acid lyase HXV88_20400 PF01175 Urocanase Rossmann-like domain HXV88_20400 PF17392 Urocanase C-terminal domain HXV88_20400 PF17391 Urocanase N-terminal domain HXV88_20405 PF00491 Arginase family HXV88_20410 PF01979 Amidohydrolase family HXV88_20415 PF00392 Bacterial regulatory proteins, gntR family HXV88_20415 PF07702 UTRA domain HXV88_20420 PF00484 Carbonic anhydrase HXV88_20425 PF00140 Sigma-70 factor, region 1.2 HXV88_20425 PF04542 Sigma-70 region 2 HXV88_20425 PF04545 Sigma-70, region 4 HXV88_20430 PF18075 FtsX extracellular domain HXV88_20435 PF00005 ABC transporter HXV88_20440 PF00448 SRP54-type protein, GTPase domain HXV88_20440 PF02881 SRP54-type protein, helical bundle domain HXV88_20465 PF02254 TrkA-N domain HXV88_20465 PF00999 Sodium/hydrogen exchanger family HXV88_20470 PF02525 Flavodoxin-like fold HXV88_20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_20475 PF03466 LysR substrate binding domain HXV88_20480 PF00106 short chain dehydrogenase HXV88_20495 PF00326 Prolyl oligopeptidase family HXV88_20495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HXV88_20510 PF13091 PLD-like domain HXV88_20520 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_20520 PF01464 Transglycosylase SLT domain HXV88_20530 PF02416 mttA/Hcf106 family HXV88_20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_20535 PF03466 LysR substrate binding domain HXV88_20540 PF01914 MarC family integral membrane protein HXV88_20545 PF10678 Protein of unknown function (DUF2492) HXV88_20550 PF00375 Sodium:dicarboxylate symporter family HXV88_20560 PF03466 LysR substrate binding domain HXV88_20560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_20565 PF13533 Biotin-lipoyl like HXV88_20570 PF07690 Major Facilitator Superfamily HXV88_20575 PF07947 YhhN family HXV88_20590 PF00440 Bacterial regulatory proteins, tetR family HXV88_20635 PF03144 Elongation factor Tu domain 2 HXV88_20635 PF03143 Elongation factor Tu C-terminal domain HXV88_20635 PF00009 Elongation factor Tu GTP binding domain HXV88_20640 PF03144 Elongation factor Tu domain 2 HXV88_20640 PF00009 Elongation factor Tu GTP binding domain HXV88_20640 PF14492 Elongation Factor G, domain II HXV88_20640 PF00679 Elongation factor G C-terminus HXV88_20640 PF03764 Elongation factor G, domain IV HXV88_20645 PF00177 Ribosomal protein S7p/S5e HXV88_20650 PF00164 Ribosomal protein S12/S23 HXV88_20655 PF04077 DsrH like protein HXV88_20660 PF02635 DsrE/DsrF-like family HXV88_20665 PF02635 DsrE/DsrF-like family HXV88_20670 PF01042 Endoribonuclease L-PSP HXV88_20675 PF08348 YheO-like PAS domain HXV88_20675 PF13309 HTH domain HXV88_20680 PF04997 RNA polymerase Rpb1, domain 1 HXV88_20680 PF00623 RNA polymerase Rpb1, domain 2 HXV88_20680 PF04983 RNA polymerase Rpb1, domain 3 HXV88_20680 PF05000 RNA polymerase Rpb1, domain 4 HXV88_20680 PF04998 RNA polymerase Rpb1, domain 5 HXV88_20685 PF04565 RNA polymerase Rpb2, domain 3 HXV88_20685 PF04560 RNA polymerase Rpb2, domain 7 HXV88_20685 PF10385 RNA polymerase beta subunit external 1 domain HXV88_20685 PF04563 RNA polymerase beta subunit HXV88_20685 PF04561 RNA polymerase Rpb2, domain 2 HXV88_20685 PF00562 RNA polymerase Rpb2, domain 6 HXV88_20690 PF16320 Ribosomal protein L7/L12 dimerisation domain HXV88_20690 PF00542 Ribosomal protein L7/L12 C-terminal domain HXV88_20695 PF00466 Ribosomal protein L10 HXV88_20700 PF00687 Ribosomal protein L1p/L10e family HXV88_20705 PF00298 Ribosomal protein L11, RNA binding domain HXV88_20705 PF03946 Ribosomal protein L11, N-terminal domain HXV88_20710 PF00467 KOW motif HXV88_20710 PF02357 Transcription termination factor nusG HXV88_20715 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HXV88_20725 PF03143 Elongation factor Tu C-terminal domain HXV88_20725 PF00009 Elongation factor Tu GTP binding domain HXV88_20725 PF03144 Elongation factor Tu domain 2 HXV88_20740 PF00485 Phosphoribulokinase / Uridine kinase family HXV88_20745 PF02237 Biotin protein ligase C terminal domain HXV88_20745 PF03099 Biotin/lipoate A/B protein ligase family HXV88_20745 PF08279 HTH domain HXV88_20750 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HXV88_20750 PF01565 FAD binding domain HXV88_20755 PF02080 TrkA-C domain HXV88_20755 PF02254 TrkA-N domain HXV88_20760 PF02386 Cation transport protein HXV88_20780 PF01131 DNA topoisomerase HXV88_20780 PF01751 Toprim domain HXV88_20790 PF00512 His Kinase A (phospho-acceptor) domain HXV88_20790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_20790 PF00497 Bacterial extracellular solute-binding proteins, family 3 HXV88_20795 PF03264 NapC/NirT cytochrome c family, N-terminal region HXV88_20800 PF00384 Molybdopterin oxidoreductase HXV88_20800 PF18364 Molybdopterin oxidoreductase N-terminal domain HXV88_20800 PF01568 Molydopterin dinucleotide binding domain HXV88_20810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_20810 PF08918 PhoQ Sensor HXV88_20815 PF00072 Response regulator receiver domain HXV88_20815 PF00486 Transcriptional regulatory protein, C terminal HXV88_20830 PF01794 Ferric reductase like transmembrane component HXV88_20835 PF00174 Oxidoreductase molybdopterin binding domain HXV88_20840 PF06496 Protein of unknown function (DUF1097) HXV88_20845 PF00158 Sigma-54 interaction domain HXV88_20845 PF00072 Response regulator receiver domain HXV88_20855 PF00512 His Kinase A (phospho-acceptor) domain HXV88_20855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_20875 PF00478 IMP dehydrogenase / GMP reductase domain HXV88_20875 PF00571 CBS domain HXV88_20880 PF10063 Uncharacterized integral membrane protein (DUF2301) HXV88_20890 PF01037 Lrp/AsnC ligand binding domain HXV88_20895 PF03590 Aspartate-ammonia ligase HXV88_20900 PF10431 C-terminal, D2-small domain, of ClpB protein HXV88_20900 PF02861 Clp amino terminal domain, pathogenicity island component HXV88_20900 PF17871 AAA lid domain HXV88_20900 PF07724 AAA domain (Cdc48 subfamily) HXV88_20900 PF00004 ATPase family associated with various cellular activities (AAA) HXV88_20910 PF01479 S4 domain HXV88_20910 PF00849 RNA pseudouridylate synthase HXV88_20915 PF13525 Outer membrane lipoprotein HXV88_20920 PF07992 Pyridine nucleotide-disulphide oxidoreductase HXV88_20920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HXV88_20925 PF00375 Sodium:dicarboxylate symporter family HXV88_20930 PF03313 Serine dehydratase alpha chain HXV88_20935 PF08348 YheO-like PAS domain HXV88_20935 PF13309 HTH domain HXV88_20945 PF02233 NAD(P) transhydrogenase beta subunit HXV88_20950 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HXV88_20950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HXV88_20950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HXV88_20955 PF00465 Iron-containing alcohol dehydrogenase HXV88_20960 PF12833 Helix-turn-helix domain HXV88_20960 PF06719 AraC-type transcriptional regulator N-terminus HXV88_20965 PF08212 Lipocalin-like domain HXV88_20970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_20970 PF00672 HAMP domain HXV88_20970 PF02743 Cache domain HXV88_20980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_20980 PF03466 LysR substrate binding domain HXV88_21000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HXV88_21000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HXV88_21005 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HXV88_21005 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HXV88_21010 PF02863 Arginine repressor, C-terminal domain HXV88_21010 PF01316 Arginine repressor, DNA binding domain HXV88_21015 PF03606 C4-dicarboxylate anaerobic carrier HXV88_21020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HXV88_21020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HXV88_21025 PF00696 Amino acid kinase family HXV88_21050 PF06969 HemN C-terminal domain HXV88_21050 PF04055 Radical SAM superfamily HXV88_21055 PF10675 Protein of unknown function (DUF2489) HXV88_21060 PF04220 Der GTPase activator (YihI) HXV88_21065 PF00034 Cytochrome c HXV88_21070 PF01926 50S ribosome-binding GTPase HXV88_21080 PF08501 Shikimate dehydrogenase substrate binding domain HXV88_21080 PF01488 Shikimate / quinate 5-dehydrogenase HXV88_21080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HXV88_21085 PF01218 Coproporphyrinogen III oxidase HXV88_21090 PF01300 Telomere recombination HXV88_21095 PF00731 AIR carboxylase HXV88_21100 PF01396 Topoisomerase DNA binding C4 zinc finger HXV88_21105 PF04361 Protein of unknown function (DUF494) HXV88_21110 PF02481 DNA recombination-mediator protein A HXV88_21110 PF17782 DprA winged helix domain HXV88_21115 PF01476 LysM domain HXV88_21120 PF01327 Polypeptide deformylase HXV88_21125 PF02911 Formyl transferase, C-terminal domain HXV88_21125 PF00551 Formyl transferase HXV88_21130 PF01029 NusB family HXV88_21130 PF01189 16S rRNA methyltransferase RsmB/F HXV88_21135 PF02080 TrkA-C domain HXV88_21135 PF02254 TrkA-N domain HXV88_21140 PF02386 Cation transport protein HXV88_21150 PF03951 Glutamine synthetase, beta-Grasp domain HXV88_21150 PF00120 Glutamine synthetase, catalytic domain HXV88_21160 PF00989 PAS fold HXV88_21160 PF00512 His Kinase A (phospho-acceptor) domain HXV88_21160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_21165 PF02954 Bacterial regulatory protein, Fis family HXV88_21165 PF00072 Response regulator receiver domain HXV88_21165 PF00158 Sigma-54 interaction domain HXV88_21170 PF00962 Adenosine/AMP deaminase HXV88_21175 PF02646 RmuC family HXV88_21190 PF02082 Transcriptional regulator HXV88_21195 PF00294 pfkB family carbohydrate kinase HXV88_21200 PF03466 LysR substrate binding domain HXV88_21200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_21205 PF00117 Glutamine amidotransferase class-I HXV88_21205 PF00958 GMP synthase C terminal domain HXV88_21205 PF02540 NAD synthase HXV88_21210 PF00171 Aldehyde dehydrogenase family HXV88_21215 PF00202 Aminotransferase class-III HXV88_21220 PF07883 Cupin domain HXV88_21220 PF01381 Helix-turn-helix HXV88_21225 PF00171 Aldehyde dehydrogenase family HXV88_21235 PF00892 EamA-like transporter family HXV88_21240 PF12729 Four helix bundle sensory module for signal transduction HXV88_21240 PF00672 HAMP domain HXV88_21240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_21245 PF04143 Sulphur transport HXV88_21250 PF01389 OmpA-like transmembrane domain HXV88_21250 PF00691 OmpA family HXV88_21255 PF00585 C-terminal regulatory domain of Threonine dehydratase HXV88_21255 PF00291 Pyridoxal-phosphate dependent enzyme HXV88_21260 PF00920 Dehydratase family HXV88_21265 PF01063 Amino-transferase class IV HXV88_21275 PF00205 Thiamine pyrophosphate enzyme, central domain HXV88_21275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HXV88_21275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HXV88_21280 PF01078 Magnesium chelatase, subunit ChlI HXV88_21280 PF13335 Magnesium chelatase, subunit ChlI C-terminal HXV88_21285 PF01553 Acyltransferase HXV88_21290 PF01553 Acyltransferase HXV88_21295 PF04463 Protein of unknown function (DUF523) HXV88_21305 PF00857 Isochorismatase family HXV88_21310 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HXV88_21310 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HXV88_21315 PF01323 DSBA-like thioredoxin domain HXV88_21320 PF01636 Phosphotransferase enzyme family HXV88_21325 PF12801 4Fe-4S binding domain HXV88_21325 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HXV88_21325 PF13746 4Fe-4S dicluster domain HXV88_21330 PF06288 Protein of unknown function (DUF1040) HXV88_21335 PF00360 Phytochrome region HXV88_21335 PF00990 Diguanylate cyclase, GGDEF domain HXV88_21335 PF01590 GAF domain HXV88_21335 PF00563 EAL domain HXV88_21340 PF13411 MerR HTH family regulatory protein HXV88_21345 PF00403 Heavy-metal-associated domain HXV88_21350 PF00156 Phosphoribosyl transferase domain HXV88_21355 PF01138 3' exoribonuclease family, domain 1 HXV88_21355 PF03725 3' exoribonuclease family, domain 2 HXV88_21360 PF03755 YicC-like family, N-terminal region HXV88_21360 PF08340 Domain of unknown function (DUF1732) HXV88_21365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_21365 PF03466 LysR substrate binding domain HXV88_21370 PF00107 Zinc-binding dehydrogenase HXV88_21370 PF08240 Alcohol dehydrogenase GroES-like domain HXV88_21375 PF00756 Putative esterase HXV88_21380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_21380 PF03466 LysR substrate binding domain HXV88_21420 PF12867 DinB superfamily HXV88_21420 PF03781 Sulfatase-modifying factor enzyme 1 HXV88_21425 PF13593 SBF-like CPA transporter family (DUF4137) HXV88_21430 PF13520 Amino acid permease HXV88_21435 PF01588 Putative tRNA binding domain HXV88_21440 PF13520 Amino acid permease HXV88_21445 PF04074 YhcH/YjgK/YiaL HXV88_21450 PF02837 Glycosyl hydrolases family 2, sugar binding domain HXV88_21450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HXV88_21450 PF00703 Glycosyl hydrolases family 2 HXV88_21450 PF02929 Beta galactosidase small chain HXV88_21450 PF16353 Domain of unknown function(DUF4981) HXV88_21455 PF00356 Bacterial regulatory proteins, lacI family HXV88_21490 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_21495 PF00476 DNA polymerase family A HXV88_21495 PF01612 3'-5' exonuclease HXV88_21495 PF01367 5'-3' exonuclease, C-terminal SAM fold HXV88_21495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HXV88_21505 PF06005 Cell division protein ZapB HXV88_21515 PF06426 Serine acetyltransferase, N-terminal HXV88_21515 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_21520 PF01545 Cation efflux family HXV88_21520 PF16916 Dimerisation domain of Zinc Transporter HXV88_21525 PF00486 Transcriptional regulatory protein, C terminal HXV88_21525 PF00072 Response regulator receiver domain HXV88_21530 PF00512 His Kinase A (phospho-acceptor) domain HXV88_21530 PF00672 HAMP domain HXV88_21530 PF16527 Two-component sensor protein CpxA, periplasmic domain HXV88_21530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_21535 PF00588 SpoU rRNA Methylase family HXV88_21540 PF01554 MatE HXV88_21545 PF02630 SCO1/SenC HXV88_21555 PF01726 LexA DNA binding domain HXV88_21555 PF00717 Peptidase S24-like HXV88_21560 PF01553 Acyltransferase HXV88_21565 PF01040 UbiA prenyltransferase family HXV88_21570 PF04345 Chorismate lyase HXV88_21590 PF00107 Zinc-binding dehydrogenase HXV88_21590 PF08240 Alcohol dehydrogenase GroES-like domain HXV88_21595 PF00356 Bacterial regulatory proteins, lacI family HXV88_21595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HXV88_21600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HXV88_21610 PF03611 PTS system sugar-specific permease component HXV88_21615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HXV88_21620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HXV88_21625 PF00535 Glycosyl transferase family 2 HXV88_21630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HXV88_21635 PF01467 Cytidylyltransferase-like HXV88_21640 PF04393 Protein of unknown function (DUF535) HXV88_21645 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HXV88_21645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HXV88_21645 PF06827 Zinc finger found in FPG and IleRS HXV88_21655 PF00471 Ribosomal protein L33 HXV88_21660 PF00830 Ribosomal L28 family HXV88_21665 PF04002 RadC-like JAB domain HXV88_21670 PF02441 Flavoprotein HXV88_21670 PF04127 DNA / pantothenate metabolism flavoprotein HXV88_21680 PF00589 Phage integrase family HXV88_21680 PF02899 Phage integrase, N-terminal SAM-like domain HXV88_21700 PF00313 'Cold-shock' DNA-binding domain HXV88_21710 PF09722 Protein of unknown function (DUF2384) HXV88_21725 PF00816 H-NS histone family HXV88_21735 PF01381 Helix-turn-helix HXV88_21755 PF00692 dUTPase HXV88_21765 PF00440 Bacterial regulatory proteins, tetR family HXV88_21770 PF00924 Mechanosensitive ion channel HXV88_21770 PF05552 Conserved TM helix HXV88_21775 PF00342 Phosphoglucose isomerase HXV88_21780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HXV88_21780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HXV88_21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HXV88_21785 PF03466 LysR substrate binding domain HXV88_21800 PF00583 Acetyltransferase (GNAT) family HXV88_21800 PF13380 CoA binding domain HXV88_21800 PF13607 Succinyl-CoA ligase like flavodoxin domain HXV88_21830 PF12724 Flavodoxin domain HXV88_21835 PF02386 Cation transport protein HXV88_21840 PF01205 Uncharacterized protein family UPF0029 HXV88_21840 PF09186 Domain of unknown function (DUF1949) HXV88_21845 PF00557 Metallopeptidase family M24 HXV88_21850 PF13193 AMP-binding enzyme C-terminal domain HXV88_21850 PF00501 AMP-binding enzyme HXV88_21855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HXV88_21855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HXV88_21855 PF00378 Enoyl-CoA hydratase/isomerase HXV88_21860 PF00108 Thiolase, N-terminal domain HXV88_21860 PF02803 Thiolase, C-terminal domain HXV88_21865 PF00486 Transcriptional regulatory protein, C terminal HXV88_21865 PF00072 Response regulator receiver domain HXV88_21870 PF00512 His Kinase A (phospho-acceptor) domain HXV88_21870 PF00672 HAMP domain HXV88_21870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_21875 PF01547 Bacterial extracellular solute-binding protein HXV88_21885 PF01206 Sulfurtransferase TusA HXV88_21890 PF01042 Endoribonuclease L-PSP HXV88_21895 PF13488 Glycine zipper HXV88_21895 PF00691 OmpA family HXV88_21900 PF03352 Methyladenine glycosylase HXV88_21905 PF02091 Glycyl-tRNA synthetase alpha subunit HXV88_21910 PF05746 DALR anticodon binding domain HXV88_21910 PF02092 Glycyl-tRNA synthetase beta subunit HXV88_21925 PF03707 Bacterial signalling protein N terminal repeat HXV88_21925 PF00990 Diguanylate cyclase, GGDEF domain HXV88_21925 PF00563 EAL domain HXV88_21930 PF03545 Yersinia virulence determinant (YopE) HXV88_21930 PF03496 ADP-ribosyltransferase exoenzyme HXV88_21935 PF03545 Yersinia virulence determinant (YopE) HXV88_21935 PF03496 ADP-ribosyltransferase exoenzyme HXV88_21940 PF05932 Tir chaperone protein (CesT) family HXV88_21950 PF00672 HAMP domain HXV88_21950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HXV88_21955 PF07702 UTRA domain HXV88_21955 PF00392 Bacterial regulatory proteins, gntR family HXV88_21960 PF02378 Phosphotransferase system, EIIC HXV88_21960 PF00367 phosphotransferase system, EIIB HXV88_21965 PF11975 Family 4 glycosyl hydrolase C-terminal domain HXV88_21965 PF02056 Family 4 glycosyl hydrolase HXV88_21970 PF00356 Bacterial regulatory proteins, lacI family HXV88_21975 PF13458 Periplasmic binding protein HXV88_21980 PF02653 Branched-chain amino acid transport system / permease component HXV88_21985 PF02653 Branched-chain amino acid transport system / permease component HXV88_21985 PF11862 Domain of unknown function (DUF3382) HXV88_21990 PF12399 Branched-chain amino acid ATP-binding cassette transporter HXV88_21990 PF00005 ABC transporter HXV88_21995 PF00005 ABC transporter HXV88_22000 PF00581 Rhodanese-like domain HXV88_22005 PF01694 Rhomboid family HXV88_22005 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HXV88_22010 PF04380 Membrane fusogenic activity HXV88_22015 PF00990 Diguanylate cyclase, GGDEF domain HXV88_22015 PF08447 PAS fold HXV88_22015 PF08448 PAS fold HXV88_22015 PF00563 EAL domain HXV88_22020 PF00175 Oxidoreductase NAD-binding domain HXV88_22025 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HXV88_22035 PF07497 Rho termination factor, RNA-binding domain HXV88_22035 PF07498 Rho termination factor, N-terminal domain HXV88_22035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HXV88_22040 PF00085 Thioredoxin HXV88_22045 PF00270 DEAD/DEAH box helicase HXV88_22045 PF00271 Helicase conserved C-terminal domain HXV88_22050 PF02541 Ppx/GppA phosphatase family HXV88_22060 PF04445 Putative SAM-dependent methyltransferase HXV88_22070 PF03707 Bacterial signalling protein N terminal repeat HXV88_22070 PF00563 EAL domain HXV88_22070 PF00990 Diguanylate cyclase, GGDEF domain HXV88_22075 PF01432 Peptidase family M3 HXV88_22080 PF00704 Glycosyl hydrolases family 18 HXV88_22085 PF18416 N-acetylglucosamine binding protein domain 2 HXV88_22085 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HXV88_22090 PF00490 Delta-aminolevulinic acid dehydratase HXV88_22095 PF01026 TatD related DNase HXV88_22100 PF00902 Sec-independent protein translocase protein (TatC) HXV88_22105 PF02416 mttA/Hcf106 family HXV88_22110 PF02416 mttA/Hcf106 family HXV88_22115 PF03109 ABC1 family HXV88_22120 PF02036 SCP-2 sterol transfer family HXV88_22125 PF01209 ubiE/COQ5 methyltransferase family HXV88_22130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HXV88_22135 PF07969 Amidohydrolase family HXV88_22140 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HXV88_22185 PF03544 Gram-negative bacterial TonB protein C-terminal HXV88_22190 PF02472 Biopolymer transport protein ExbD/TolR HXV88_22195 PF01618 MotA/TolQ/ExbB proton channel family HXV88_22200 PF01618 MotA/TolQ/ExbB proton channel family HXV88_22210 PF00196 Bacterial regulatory proteins, luxR family HXV88_22210 PF03472 Autoinducer binding domain HXV88_22215 PF01380 SIS domain HXV88_22220 PF08220 DeoR-like helix-turn-helix domain HXV88_22220 PF00455 DeoR C terminal sensor domain HXV88_22225 PF00486 Transcriptional regulatory protein, C terminal HXV88_22225 PF00072 Response regulator receiver domain HXV88_22230 PF00512 His Kinase A (phospho-acceptor) domain HXV88_22230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HXV88_22230 PF00672 HAMP domain HXV88_22235 PF00905 Penicillin binding protein transpeptidase domain HXV88_22245 PF06123 Inner membrane protein CreD HXV88_22260 PF13439 Glycosyltransferase Family 4 HXV88_22260 PF00534 Glycosyl transferases group 1 HXV88_22290 PF13614 AAA domain HXV88_22290 PF02706 Chain length determinant protein HXV88_22290 PF13807 G-rich domain on putative tyrosine kinase HXV88_22305 PF02397 Bacterial sugar transferase HXV88_22310 PF14602 Hexapeptide repeat of succinyl-transferase HXV88_22310 PF00132 Bacterial transferase hexapeptide (six repeats) HXV88_22310 PF12804 MobA-like NTP transferase domain HXV88_22315 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HXV88_22315 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HXV88_22320 PF02874 ATP synthase alpha/beta family, beta-barrel domain HXV88_22320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HXV88_22325 PF00231 ATP synthase HXV88_22330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HXV88_22330 PF02874 ATP synthase alpha/beta family, beta-barrel domain HXV88_22330 PF00306 ATP synthase alpha/beta chain, C terminal domain HXV88_22335 PF00213 ATP synthase delta (OSCP) subunit HXV88_22340 PF00430 ATP synthase B/B' CF(0) HXV88_22345 PF00137 ATP synthase subunit C HXV88_22350 PF00119 ATP synthase A chain HXV88_22360 PF17762 HTH domain found in ParB protein HXV88_22360 PF02195 ParB-like nuclease domain HXV88_22365 PF13614 AAA domain HXV88_22370 PF02527 rRNA small subunit methyltransferase G HXV88_22375 PF01134 Glucose inhibited division protein A HXV88_22375 PF13932 GidA associated domain HXV88_22380 PF00258 Flavodoxin HXV88_22385 PF07715 TonB-dependent Receptor Plug Domain HXV88_22385 PF00593 TonB dependent receptor HXV88_22390 PF00005 ABC transporter HXV88_22395 PF00005 ABC transporter HXV88_22400 PF01497 Periplasmic binding protein HXV88_22405 PF01032 FecCD transport family HXV88_22410 PF10396 GTP-binding protein TrmE N-terminus HXV88_22410 PF12631 MnmE helical domain HXV88_22410 PF01926 50S ribosome-binding GTPase HXV88_22415 PF14849 YidC periplasmic domain HXV88_22415 PF02096 60Kd inner membrane protein HXV88_22420 PF01809 Putative membrane protein insertion efficiency factor HXV88_22425 PF00825 Ribonuclease P HXV88_22430 PF00468 Ribosomal protein L34 HXV88_22440 PF00528 Binding-protein-dependent transport system inner membrane component HXV88_22445 PF00497 Bacterial extracellular solute-binding proteins, family 3