AMS64_00010 SM00422 helix_turn_helix, mercury resistance AMS64_00040 SM00829 Enoylreductase AMS64_00085 SM01038 Beta galactosidase small chain AMS64_00090 SM00354 helix_turn _helix lactose operon repressor AMS64_00135 SM00360 RNA recognition motif AMS64_00165 SM01001 AIR carboxylase AMS64_00180 SM00448 cheY-homologous receiver domain AMS64_00180 SM00850 LytTr DNA-binding domain AMS64_00185 SM00387 Histidine kinase-like ATPases AMS64_00235 SM00267 diguanylate cyclase AMS64_00255 SM00072 Guanylate kinase homologues. AMS64_00260 SM01409 AMS64_00260 AMS64_00265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_00265 SM00954 Region found in RelA / SpoT proteins AMS64_00290 SM00458 Ricin-type beta-trefoil AMS64_00330 SM00091 PAS domain AMS64_00330 SM00387 Histidine kinase-like ATPases AMS64_00355 SM00387 Histidine kinase-like ATPases AMS64_00355 SM00388 His Kinase A (phosphoacceptor) domain AMS64_00360 SM00448 cheY-homologous receiver domain AMS64_00360 SM00862 Transcriptional regulatory protein, C terminal AMS64_00370 SM00342 helix_turn_helix, arabinose operon control protein AMS64_00395 SM00342 helix_turn_helix, arabinose operon control protein AMS64_00415 SM00387 Histidine kinase-like ATPases AMS64_00415 SM00433 TopoisomeraseII AMS64_00425 SM00480 DNA polymerase III beta subunit AMS64_00430 SM00382 ATPases associated with a variety of cellular activities AMS64_00430 SM00760 Bacterial dnaA protein helix-turn-helix domain AMS64_00435 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_00435 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMS64_00445 SM00382 ATPases associated with a variety of cellular activities AMS64_00480 SM00382 ATPases associated with a variety of cellular activities AMS64_00485 SM00382 ATPases associated with a variety of cellular activities AMS64_00500 SM01228 AMS64_00500 AMS64_00515 SM00470 ParB-like nuclease domain AMS64_00555 SM00382 ATPases associated with a variety of cellular activities AMS64_00585 SM00387 Histidine kinase-like ATPases AMS64_00585 SM00388 His Kinase A (phosphoacceptor) domain AMS64_00590 SM00448 cheY-homologous receiver domain AMS64_00590 SM00862 Transcriptional regulatory protein, C terminal AMS64_00595 SM00420 helix_turn_helix, Deoxyribose operon repressor AMS64_00595 SM01134 AMS64_00595 AMS64_00605 SM00421 helix_turn_helix, Lux Regulon AMS64_00715 SM01004 Delta-aminolevulinic acid dehydratase AMS64_00720 SM00495 Chitin-binding domain type 3 AMS64_00725 SM00495 Chitin-binding domain type 3 AMS64_00725 SM00636 AMS64_00725 AMS64_00740 SM00052 Putative diguanylate phosphodiesterase AMS64_00740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMS64_00740 SM00091 PAS domain AMS64_00740 SM00267 diguanylate cyclase AMS64_00745 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_00765 SM00487 DEAD-like helicases superfamily AMS64_00765 SM00490 helicase superfamily c-terminal domain AMS64_00775 SM00357 Cold shock protein domain AMS64_00775 SM00382 ATPases associated with a variety of cellular activities AMS64_00775 SM00959 Rho termination factor, N-terminal domain AMS64_00795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMS64_00795 SM00267 diguanylate cyclase AMS64_00815 SM00450 Rhodanese Homology Domain AMS64_00820 SM00382 ATPases associated with a variety of cellular activities AMS64_00825 SM00382 ATPases associated with a variety of cellular activities AMS64_00845 SM00354 helix_turn _helix lactose operon repressor AMS64_00870 SM00052 Putative diguanylate phosphodiesterase AMS64_00880 SM00836 DALR anticodon binding domain AMS64_00920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_00920 SM00387 Histidine kinase-like ATPases AMS64_00920 SM00388 His Kinase A (phosphoacceptor) domain AMS64_00925 SM00448 cheY-homologous receiver domain AMS64_00925 SM00862 Transcriptional regulatory protein, C terminal AMS64_00990 SM00881 CoA binding domain AMS64_01080 SM00528 Domain in histone-like proteins of HNS family AMS64_01175 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMS64_01175 SM01232 AMS64_01175 AMS64_01210 SM00829 Enoylreductase AMS64_01235 SM00563 Phosphate acyltransferases AMS64_01265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_01265 SM00387 Histidine kinase-like ATPases AMS64_01265 SM00388 His Kinase A (phosphoacceptor) domain AMS64_01270 SM00448 cheY-homologous receiver domain AMS64_01270 SM00862 Transcriptional regulatory protein, C terminal AMS64_01280 SM00971 Serine acetyltransferase, N-terminal AMS64_01300 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMS64_01300 SM00474 3'-5' exonuclease AMS64_01300 SM00475 5'-3' exonuclease AMS64_01300 SM00482 DNA polymerase A domain AMS64_01350 SM00052 Putative diguanylate phosphodiesterase AMS64_01350 SM00267 diguanylate cyclase AMS64_01360 SM00829 Enoylreductase AMS64_01425 SM00342 helix_turn_helix, arabinose operon control protein AMS64_01485 SM00382 ATPases associated with a variety of cellular activities AMS64_01510 SM00924 MgtE intracellular N domain AMS64_01535 SM00382 ATPases associated with a variety of cellular activities AMS64_01535 SM01086 C-terminal, D2-small domain, of ClpB protein AMS64_01550 SM00836 DALR anticodon binding domain AMS64_01550 SM01016 Arginyl tRNA synthetase N terminal dom AMS64_01555 SM00464 Found in ATP-dependent protease La (LON) AMS64_01595 SM00354 helix_turn _helix lactose operon repressor AMS64_01600 SM01038 Beta galactosidase small chain AMS64_01610 SM00382 ATPases associated with a variety of cellular activities AMS64_01620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_01620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_01640 SM00642 Alpha-amylase domain AMS64_01685 SM01230 AMS64_01685 AMS64_01705 SM00382 ATPases associated with a variety of cellular activities AMS64_01740 SM00341 Helicase and RNase D C-terminal AMS64_01740 SM00487 DEAD-like helicases superfamily AMS64_01740 SM00490 helicase superfamily c-terminal domain AMS64_01740 SM00956 AMS64_01740 AMS64_01770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_01770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_01770 SM01358 AMS64_01770 AMS64_01785 SM00487 DEAD-like helicases superfamily AMS64_01785 SM00490 helicase superfamily c-terminal domain AMS64_01805 SM00919 Malic enzyme, NAD binding domain AMS64_01805 SM01274 AMS64_01805 AMS64_01835 SM00487 DEAD-like helicases superfamily AMS64_01835 SM00490 helicase superfamily c-terminal domain AMS64_01840 SM00155 Phospholipase D. Active site motifs. AMS64_01865 SM00354 helix_turn _helix lactose operon repressor AMS64_01885 SM00450 Rhodanese Homology Domain AMS64_01930 SM00316 Ribosomal protein S1-like RNA-binding domain AMS64_01930 SM00732 Likely ribonuclease with RNase H fold. AMS64_01940 SM00448 cheY-homologous receiver domain AMS64_01940 SM00862 Transcriptional regulatory protein, C terminal AMS64_01945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_01945 SM00387 Histidine kinase-like ATPases AMS64_01945 SM00388 His Kinase A (phosphoacceptor) domain AMS64_01955 SM01403 AMS64_01955 AMS64_01975 SM01382 AMS64_01975 AMS64_01975 SM01383 AMS64_01975 AMS64_01990 SM00322 K homology RNA-binding domain AMS64_02010 SM01374 AMS64_02010 AMS64_02075 SM00363 S4 RNA-binding domain AMS64_02075 SM01390 AMS64_02075 AMS64_02080 SM00662 RNA polymerases D AMS64_02120 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_02120 SM00267 diguanylate cyclase AMS64_02125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_02125 SM00387 Histidine kinase-like ATPases AMS64_02125 SM00388 His Kinase A (phosphoacceptor) domain AMS64_02130 SM00448 cheY-homologous receiver domain AMS64_02130 SM00862 Transcriptional regulatory protein, C terminal AMS64_02185 SM00091 PAS domain AMS64_02185 SM00267 diguanylate cyclase AMS64_02195 SM00530 Helix-turn-helix XRE-family like proteins AMS64_02200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_02200 SM00866 AMS64_02200 AMS64_02225 SM00382 ATPases associated with a variety of cellular activities AMS64_02235 SM00267 diguanylate cyclase AMS64_02295 SM00421 helix_turn_helix, Lux Regulon AMS64_02300 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_02315 SM01060 AMS64_02315 AMS64_02325 SM00342 helix_turn_helix, arabinose operon control protein AMS64_02325 SM00871 Bacterial transcription activator, effector binding domain AMS64_02545 SM00530 Helix-turn-helix XRE-family like proteins AMS64_02570 SM00530 Helix-turn-helix XRE-family like proteins AMS64_02705 SM01219 AMS64_02705 AMS64_02740 SM00100 Cyclic nucleotide-monophosphate binding domain AMS64_02795 SM00382 ATPases associated with a variety of cellular activities AMS64_02800 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_02820 SM00382 ATPases associated with a variety of cellular activities AMS64_02895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS64_02900 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS64_02950 SM00749 bacterial OsmY and nodulation domain AMS64_02995 SM00857 Resolvase, N terminal domain AMS64_03035 SM00382 ATPases associated with a variety of cellular activities AMS64_03035 SM00448 cheY-homologous receiver domain AMS64_03080 SM00858 AMS64_03080 AMS64_03265 SM00842 Cell division protein FtsA AMS64_03270 SM00864 Tubulin/FtsZ family, GTPase domain AMS64_03270 SM00865 Tubulin/FtsZ family, C-terminal domain AMS64_03285 SM00957 SecA DEAD-like domain AMS64_03285 SM00958 SecA preprotein cross-linking domain AMS64_03340 SM00644 AMS64_03340 AMS64_03345 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_03345 SM00895 AMS64_03345 AMS64_03365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMS64_03365 SM00267 diguanylate cyclase AMS64_03370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_03370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_03395 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMS64_03430 SM00905 Dihydroneopterin aldolase AMS64_03435 SM01207 AMS64_03435 AMS64_03505 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMS64_03560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMS64_03560 SM00534 ATPase domain of DNA mismatch repair MUTS family AMS64_03570 SM00382 ATPases associated with a variety of cellular activities AMS64_03580 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMS64_03625 SM01091 Transporter associated domain AMS64_03630 SM00870 AMS64_03630 AMS64_03645 SM00354 helix_turn _helix lactose operon repressor AMS64_03655 SM00642 Alpha-amylase domain AMS64_03660 SM01266 AMS64_03660 AMS64_03675 SM00487 DEAD-like helicases superfamily AMS64_03675 SM00490 helicase superfamily c-terminal domain AMS64_03725 SM00852 Probable molybdopterin binding domain AMS64_03745 SM00344 helix_turn_helix ASNC type AMS64_03765 SM00642 Alpha-amylase domain AMS64_03805 SM00851 MGS-like domain AMS64_03840 SM00260 Two component signalling adaptor domain AMS64_03840 SM00448 cheY-homologous receiver domain AMS64_03870 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMS64_03915 SM00487 DEAD-like helicases superfamily AMS64_03915 SM00490 helicase superfamily c-terminal domain AMS64_03950 SM00271 DnaJ molecular chaperone homology domain AMS64_04010 SM00387 Histidine kinase-like ATPases AMS64_04010 SM00433 TopoisomeraseII AMS64_04015 SM00434 DNA Topoisomerase IV AMS64_04025 SM00382 ATPases associated with a variety of cellular activities AMS64_04050 SM00271 DnaJ molecular chaperone homology domain AMS64_04090 SM00563 Phosphate acyltransferases AMS64_04125 SM00986 Uracil DNA glycosylase superfamily AMS64_04125 SM00987 UreE urease accessory protein, C-terminal domain AMS64_04145 SM00382 ATPases associated with a variety of cellular activities AMS64_04185 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS64_04200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_04205 SM00478 endonuclease III AMS64_04205 SM00525 AMS64_04205 AMS64_04235 SM00267 diguanylate cyclase AMS64_04240 SM00316 Ribosomal protein S1-like RNA-binding domain AMS64_04240 SM00357 Cold shock protein domain AMS64_04240 SM00955 AMS64_04240 AMS64_04275 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMS64_04290 SM00487 DEAD-like helicases superfamily AMS64_04290 SM00490 helicase superfamily c-terminal domain AMS64_04330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_04375 SM00822 AMS64_04375 AMS64_04420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMS64_04420 SM00267 diguanylate cyclase AMS64_04425 SM00357 Cold shock protein domain AMS64_04425 SM00955 AMS64_04425 AMS64_04440 SM00421 helix_turn_helix, Lux Regulon AMS64_04450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_04450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_04455 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMS64_04460 SM00382 ATPases associated with a variety of cellular activities AMS64_04605 SM00344 helix_turn_helix ASNC type AMS64_04635 SM00642 Alpha-amylase domain AMS64_04640 SM00642 Alpha-amylase domain AMS64_04650 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMS64_04665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_04665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_04675 SM00244 prohibitin homologues AMS64_04710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_04730 SM00382 ATPases associated with a variety of cellular activities AMS64_04765 SM00448 cheY-homologous receiver domain AMS64_04765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_04795 SM00487 DEAD-like helicases superfamily AMS64_04795 SM00490 helicase superfamily c-terminal domain AMS64_04795 SM00847 Helicase associated domain (HA2) Add an annotation AMS64_04860 SM00450 Rhodanese Homology Domain AMS64_04885 SM00382 ATPases associated with a variety of cellular activities AMS64_04910 SM00014 Acid phosphatase homologues AMS64_04935 SM00644 AMS64_04935 AMS64_04945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_04945 SM00387 Histidine kinase-like ATPases AMS64_04945 SM00388 His Kinase A (phosphoacceptor) domain AMS64_04945 SM00448 cheY-homologous receiver domain AMS64_04955 SM00954 Region found in RelA / SpoT proteins AMS64_04970 SM01192 AMS64_04970 AMS64_04970 SM01193 AMS64_04970 AMS64_05030 SM00382 ATPases associated with a variety of cellular activities AMS64_05035 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_05050 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_05140 SM00257 Lysin motif AMS64_05195 SM00849 Metallo-beta-lactamase superfamily AMS64_05230 SM00487 DEAD-like helicases superfamily AMS64_05230 SM00490 helicase superfamily c-terminal domain AMS64_05235 SM00267 diguanylate cyclase AMS64_05250 SM00635 Bacterial Ig-like domain 2 AMS64_05305 SM00387 Histidine kinase-like ATPases AMS64_05310 SM00448 cheY-homologous receiver domain AMS64_05310 SM00862 Transcriptional regulatory protein, C terminal AMS64_05340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_05340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_05350 SM00287 Bacterial SH3 domain homologues AMS64_05375 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMS64_05485 SM00358 Double-stranded RNA binding motif AMS64_05485 SM00535 Ribonuclease III family AMS64_05535 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMS64_05545 SM00052 Putative diguanylate phosphodiesterase AMS64_05545 SM00091 PAS domain AMS64_05545 SM00267 diguanylate cyclase AMS64_05630 SM01057 Eukaryotic-type carbonic anhydrase AMS64_05675 SM00100 Cyclic nucleotide-monophosphate binding domain AMS64_05675 SM00419 helix_turn_helix, cAMP Regulatory protein AMS64_05705 SM00267 diguanylate cyclase AMS64_05715 SM00260 Two component signalling adaptor domain AMS64_05715 SM00448 cheY-homologous receiver domain AMS64_05740 SM00320 WD40 repeats AMS64_05750 SM00382 ATPases associated with a variety of cellular activities AMS64_05750 SM00448 cheY-homologous receiver domain AMS64_05775 SM00978 AMS64_05775 AMS64_05785 SM00382 ATPases associated with a variety of cellular activities AMS64_05790 SM01005 Alanine racemase, C-terminal domain AMS64_05810 SM00382 ATPases associated with a variety of cellular activities AMS64_05855 SM00421 helix_turn_helix, Lux Regulon AMS64_05900 SM00530 Helix-turn-helix XRE-family like proteins AMS64_05910 SM00387 Histidine kinase-like ATPases AMS64_05910 SM00388 His Kinase A (phosphoacceptor) domain AMS64_05910 SM00448 cheY-homologous receiver domain AMS64_05920 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMS64_05920 SM00495 Chitin-binding domain type 3 AMS64_05920 SM00636 AMS64_05920 AMS64_05925 SM00267 diguanylate cyclase AMS64_05930 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMS64_05930 SM00495 Chitin-binding domain type 3 AMS64_05930 SM00636 AMS64_05930 AMS64_05940 SM00495 Chitin-binding domain type 3 AMS64_05980 SM00260 Two component signalling adaptor domain AMS64_05980 SM00448 cheY-homologous receiver domain AMS64_05990 SM00382 ATPases associated with a variety of cellular activities AMS64_06005 SM00052 Putative diguanylate phosphodiesterase AMS64_06030 SM00450 Rhodanese Homology Domain AMS64_06045 SM00852 Probable molybdopterin binding domain AMS64_06095 SM00937 AMS64_06095 AMS64_06100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_06100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_06110 SM00870 AMS64_06110 AMS64_06120 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMS64_06145 SM00382 ATPases associated with a variety of cellular activities AMS64_06155 SM00220 Serine/Threonine protein kinases, catalytic domain AMS64_06165 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_06180 SM00936 Penicillin-binding protein 5, C-terminal domain AMS64_06280 SM00422 helix_turn_helix, mercury resistance AMS64_06300 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_06300 SM01091 Transporter associated domain AMS64_06315 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_06330 SM00357 Cold shock protein domain AMS64_06335 SM00267 diguanylate cyclase AMS64_06360 SM00267 diguanylate cyclase AMS64_06380 SM00841 Elongation factor P, C-terminal AMS64_06380 SM01185 AMS64_06380 AMS64_06390 SM01240 AMS64_06390 AMS64_06410 SM00387 Histidine kinase-like ATPases AMS64_06410 SM00388 His Kinase A (phosphoacceptor) domain AMS64_06415 SM00448 cheY-homologous receiver domain AMS64_06415 SM00862 Transcriptional regulatory protein, C terminal AMS64_06430 SM01236 AMS64_06430 AMS64_06510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_06510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_06545 SM00849 Metallo-beta-lactamase superfamily AMS64_06555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_06555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_06570 SM00842 Cell division protein FtsA AMS64_06590 SM00965 Secretin and TonB N terminus short domain AMS64_06655 SM01150 AMS64_06655 AMS64_06675 SM00642 Alpha-amylase domain AMS64_06705 SM01022 AMS64_06705 AMS64_06710 SM00100 Cyclic nucleotide-monophosphate binding domain AMS64_06795 SM01400 AMS64_06795 AMS64_06820 SM00937 AMS64_06820 AMS64_06860 SM00986 Uracil DNA glycosylase superfamily AMS64_06860 SM00987 UreE urease accessory protein, C-terminal domain AMS64_06875 SM00342 helix_turn_helix, arabinose operon control protein AMS64_06885 SM00788 Adenylosuccinate synthetase AMS64_06915 SM00822 AMS64_06915 AMS64_06930 SM00267 diguanylate cyclase AMS64_06980 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMS64_06980 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMS64_06980 SM00493 AMS64_06980 AMS64_06990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_07010 SM00382 ATPases associated with a variety of cellular activities AMS64_07015 SM00382 ATPases associated with a variety of cellular activities AMS64_07035 SM00091 PAS domain AMS64_07035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_07035 SM00387 Histidine kinase-like ATPases AMS64_07035 SM00388 His Kinase A (phosphoacceptor) domain AMS64_07035 SM00448 cheY-homologous receiver domain AMS64_07085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMS64_07085 SM00091 PAS domain AMS64_07085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_07095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_07105 SM00852 Probable molybdopterin binding domain AMS64_07115 SM00382 ATPases associated with a variety of cellular activities AMS64_07130 SM00382 ATPases associated with a variety of cellular activities AMS64_07130 SM00448 cheY-homologous receiver domain AMS64_07135 SM00387 Histidine kinase-like ATPases AMS64_07135 SM00388 His Kinase A (phosphoacceptor) domain AMS64_07175 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS64_07200 SM00919 Malic enzyme, NAD binding domain AMS64_07200 SM01274 AMS64_07200 AMS64_07225 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_07230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_07230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_07235 SM00862 Transcriptional regulatory protein, C terminal AMS64_07280 SM00342 helix_turn_helix, arabinose operon control protein AMS64_07280 SM00871 Bacterial transcription activator, effector binding domain AMS64_07305 SM00382 ATPases associated with a variety of cellular activities AMS64_07365 SM00382 ATPases associated with a variety of cellular activities AMS64_07365 SM00962 SRP54-type protein, GTPase domain AMS64_07380 SM00448 cheY-homologous receiver domain AMS64_07390 SM00073 Histidine Phosphotransfer domain AMS64_07390 SM00260 Two component signalling adaptor domain AMS64_07390 SM00387 Histidine kinase-like ATPases AMS64_07390 SM01231 AMS64_07390 AMS64_07395 SM00448 cheY-homologous receiver domain AMS64_07415 SM00260 Two component signalling adaptor domain AMS64_07420 SM00260 Two component signalling adaptor domain AMS64_07430 SM00382 ATPases associated with a variety of cellular activities AMS64_07575 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMS64_07640 SM00354 helix_turn _helix lactose operon repressor AMS64_07710 SM00382 ATPases associated with a variety of cellular activities AMS64_07790 SM00342 helix_turn_helix, arabinose operon control protein AMS64_07935 SM00493 AMS64_07935 AMS64_07940 SM00387 Histidine kinase-like ATPases AMS64_07945 SM00382 ATPases associated with a variety of cellular activities AMS64_07950 SM00382 ATPases associated with a variety of cellular activities AMS64_07970 SM00382 ATPases associated with a variety of cellular activities AMS64_08010 SM00091 PAS domain AMS64_08010 SM00382 ATPases associated with a variety of cellular activities AMS64_08020 SM00267 diguanylate cyclase AMS64_08075 SM00822 AMS64_08075 AMS64_08080 SM00342 helix_turn_helix, arabinose operon control protein AMS64_08080 SM00871 Bacterial transcription activator, effector binding domain AMS64_08105 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_08170 SM00387 Histidine kinase-like ATPases AMS64_08170 SM00388 His Kinase A (phosphoacceptor) domain AMS64_08170 SM00448 cheY-homologous receiver domain AMS64_08175 SM00382 ATPases associated with a variety of cellular activities AMS64_08180 SM00382 ATPases associated with a variety of cellular activities AMS64_08220 SM01118 AMS64_08220 AMS64_08265 SM00861 Transketolase, pyrimidine binding domain AMS64_08280 SM00881 CoA binding domain AMS64_08295 SM00382 ATPases associated with a variety of cellular activities AMS64_08305 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_08305 SM00866 AMS64_08305 AMS64_08395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_08395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_08395 SM01049 AMS64_08395 AMS64_08405 SM01144 AMS64_08405 AMS64_08425 SM00342 helix_turn_helix, arabinose operon control protein AMS64_08440 SM00642 Alpha-amylase domain AMS64_08475 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_08500 SM00382 ATPases associated with a variety of cellular activities AMS64_08510 SM00518 AP endonuclease family 2 AMS64_08535 SM00090 RIO-like kinase AMS64_08545 SM00267 diguanylate cyclase AMS64_08555 SM00486 DNA polymerase type-B family AMS64_08605 SM00825 Beta-ketoacyl synthase AMS64_08620 SM00487 DEAD-like helicases superfamily AMS64_08620 SM00490 helicase superfamily c-terminal domain AMS64_08645 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_08650 SM01322 AMS64_08650 AMS64_08705 SM00382 ATPases associated with a variety of cellular activities AMS64_08790 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS64_08995 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMS64_09000 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMS64_09025 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMS64_09030 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMS64_09060 SM00091 PAS domain AMS64_09060 SM00267 diguanylate cyclase AMS64_09120 SM00491 AMS64_09120 AMS64_09145 SM00341 Helicase and RNase D C-terminal AMS64_09145 SM00474 3'-5' exonuclease AMS64_09150 SM00849 Metallo-beta-lactamase superfamily AMS64_09155 SM00450 Rhodanese Homology Domain AMS64_09170 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMS64_09175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_09175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_09185 SM00880 AMS64_09185 AMS64_09220 SM00354 helix_turn _helix lactose operon repressor AMS64_09260 SM00925 MltA specific insert domain AMS64_09290 SM00434 DNA Topoisomerase IV AMS64_09295 SM00642 Alpha-amylase domain AMS64_09305 SM00671 Sel1-like repeats. AMS64_09310 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMS64_09335 SM00873 B3/4 domain AMS64_09335 SM00874 tRNA synthetase B5 domain AMS64_09335 SM00896 Ferredoxin-fold anticodon binding domain AMS64_09340 SM00411 bacterial (prokaryotic) histone like domain AMS64_09345 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_09345 SM00387 Histidine kinase-like ATPases AMS64_09345 SM00388 His Kinase A (phosphoacceptor) domain AMS64_09345 SM00448 cheY-homologous receiver domain AMS64_09370 SM00267 diguanylate cyclase AMS64_09375 SM00354 helix_turn _helix lactose operon repressor AMS64_09395 SM00382 ATPases associated with a variety of cellular activities AMS64_09430 SM00382 ATPases associated with a variety of cellular activities AMS64_09455 SM00100 Cyclic nucleotide-monophosphate binding domain AMS64_09455 SM00419 helix_turn_helix, cAMP Regulatory protein AMS64_09510 SM00945 ProQ/FINO family AMS64_09515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS64_09515 SM00245 tail specific protease AMS64_09555 SM00981 AMS64_09555 AMS64_09565 SM00382 ATPases associated with a variety of cellular activities AMS64_09665 SM00822 AMS64_09665 AMS64_09800 SM00825 Beta-ketoacyl synthase AMS64_09810 SM00822 AMS64_09810 AMS64_09815 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMS64_09850 SM00363 S4 RNA-binding domain AMS64_09855 SM00316 Ribosomal protein S1-like RNA-binding domain AMS64_09875 SM00354 helix_turn _helix lactose operon repressor AMS64_09900 SM00487 DEAD-like helicases superfamily AMS64_09900 SM00490 helicase superfamily c-terminal domain AMS64_09920 SM00463 Small MutS-related domain AMS64_09925 SM00091 PAS domain AMS64_09925 SM00267 diguanylate cyclase AMS64_09930 SM00855 Phosphoglycerate mutase family AMS64_09945 SM00782 PhnA Zinc-Ribbon AMS64_09980 SM00487 DEAD-like helicases superfamily AMS64_09980 SM00490 helicase superfamily c-terminal domain AMS64_09985 SM00763 PrkA AAA domain AMS64_10025 SM00327 von Willebrand factor (vWF) type A domain AMS64_10030 SM00028 Tetratricopeptide repeats AMS64_10060 SM00052 Putative diguanylate phosphodiesterase AMS64_10070 SM00422 helix_turn_helix, mercury resistance AMS64_10085 SM00382 ATPases associated with a variety of cellular activities AMS64_10085 SM00487 DEAD-like helicases superfamily AMS64_10085 SM00490 helicase superfamily c-terminal domain AMS64_10085 SM00847 Helicase associated domain (HA2) Add an annotation AMS64_10090 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_10120 SM00327 von Willebrand factor (vWF) type A domain AMS64_10125 SM00327 von Willebrand factor (vWF) type A domain AMS64_10200 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMS64_10210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMS64_10210 SM00382 ATPases associated with a variety of cellular activities AMS64_10225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS64_10330 SM00382 ATPases associated with a variety of cellular activities AMS64_10335 SM00382 ATPases associated with a variety of cellular activities AMS64_10475 SM00331 Sigma factor PP2C-like phosphatases AMS64_10475 SM00448 cheY-homologous receiver domain AMS64_10505 SM00387 Histidine kinase-like ATPases AMS64_10505 SM00388 His Kinase A (phosphoacceptor) domain AMS64_10505 SM00448 cheY-homologous receiver domain AMS64_10535 SM00530 Helix-turn-helix XRE-family like proteins AMS64_10625 SM00530 Helix-turn-helix XRE-family like proteins AMS64_10630 SM00382 ATPases associated with a variety of cellular activities AMS64_10655 SM00822 AMS64_10655 AMS64_10695 SM00878 Biotin carboxylase C-terminal domain AMS64_10695 SM01209 AMS64_10695 AMS64_10705 SM00422 helix_turn_helix, mercury resistance AMS64_10710 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_10755 SM00507 HNH nucleases AMS64_10775 SM00100 Cyclic nucleotide-monophosphate binding domain AMS64_10775 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_10780 SM00479 AMS64_10780 AMS64_10825 SM00382 ATPases associated with a variety of cellular activities AMS64_10835 SM00411 bacterial (prokaryotic) histone like domain AMS64_10840 SM00382 ATPases associated with a variety of cellular activities AMS64_10840 SM00464 Found in ATP-dependent protease La (LON) AMS64_10845 SM00382 ATPases associated with a variety of cellular activities AMS64_10845 SM00994 ClpX C4-type zinc finger AMS64_10845 SM01086 C-terminal, D2-small domain, of ClpB protein AMS64_10865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_10875 SM00382 ATPases associated with a variety of cellular activities AMS64_10890 SM00487 DEAD-like helicases superfamily AMS64_10890 SM00490 helicase superfamily c-terminal domain AMS64_10890 SM00982 AMS64_10890 AMS64_10890 SM01058 CarD-like/TRCF domain AMS64_10915 SM00855 Phosphoglycerate mutase family AMS64_10930 SM00364 Leucine-rich repeats, bacterial type AMS64_10930 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMS64_10940 SM00342 helix_turn_helix, arabinose operon control protein AMS64_10955 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_10955 SM01240 AMS64_10955 AMS64_10970 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_10970 SM00866 AMS64_10970 AMS64_10980 SM00872 Alpha mannosidase, middle domain AMS64_10990 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMS64_11000 SM00487 DEAD-like helicases superfamily AMS64_11000 SM00490 helicase superfamily c-terminal domain AMS64_11005 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_11010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_11010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_11030 SM00893 Electron transfer flavoprotein domain AMS64_11035 SM00893 Electron transfer flavoprotein domain AMS64_11075 SM00052 Putative diguanylate phosphodiesterase AMS64_11075 SM00267 diguanylate cyclase AMS64_11130 SM00382 ATPases associated with a variety of cellular activities AMS64_11140 SM00843 AMS64_11140 AMS64_11145 SM00344 helix_turn_helix ASNC type AMS64_11150 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMS64_11150 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMS64_11160 SM00267 diguanylate cyclase AMS64_11160 SM00448 cheY-homologous receiver domain AMS64_11180 SM00316 Ribosomal protein S1-like RNA-binding domain AMS64_11185 SM00382 ATPases associated with a variety of cellular activities AMS64_11185 SM01086 C-terminal, D2-small domain, of ClpB protein AMS64_11195 SM00357 Cold shock protein domain AMS64_11225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_11225 SM00387 Histidine kinase-like ATPases AMS64_11225 SM00388 His Kinase A (phosphoacceptor) domain AMS64_11275 SM00382 ATPases associated with a variety of cellular activities AMS64_11280 SM00382 ATPases associated with a variety of cellular activities AMS64_11280 SM01086 C-terminal, D2-small domain, of ClpB protein AMS64_11340 SM01154 AMS64_11340 AMS64_11405 SM00382 ATPases associated with a variety of cellular activities AMS64_11535 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMS64_11545 SM00014 Acid phosphatase homologues AMS64_11550 SM00479 AMS64_11550 AMS64_11560 SM01211 AMS64_11560 AMS64_11565 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_11580 SM00564 beta-propeller repeat AMS64_11600 SM00530 Helix-turn-helix XRE-family like proteins AMS64_11605 SM00028 Tetratricopeptide repeats AMS64_11615 SM00562 AMS64_11615 AMS64_11640 SM00271 DnaJ molecular chaperone homology domain AMS64_11690 SM00028 Tetratricopeptide repeats AMS64_11695 SM00450 Rhodanese Homology Domain AMS64_11710 SM01323 AMS64_11710 AMS64_11725 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_11765 SM00052 Putative diguanylate phosphodiesterase AMS64_11765 SM00267 diguanylate cyclase AMS64_11785 SM00382 ATPases associated with a variety of cellular activities AMS64_11790 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_11815 SM00487 DEAD-like helicases superfamily AMS64_11815 SM00490 helicase superfamily c-terminal domain AMS64_11835 SM00899 AMS64_11835 AMS64_11865 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_11870 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_11875 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_11885 SM00840 AMS64_11885 AMS64_11915 SM00387 Histidine kinase-like ATPases AMS64_11915 SM00388 His Kinase A (phosphoacceptor) domain AMS64_11920 SM00448 cheY-homologous receiver domain AMS64_11920 SM00862 Transcriptional regulatory protein, C terminal AMS64_11945 SM00490 helicase superfamily c-terminal domain AMS64_11965 SM00885 D5 N terminal like AMS64_11995 SM00530 Helix-turn-helix XRE-family like proteins AMS64_12110 SM00507 HNH nucleases AMS64_12190 SM01040 BRO family, N-terminal domain AMS64_12330 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMS64_12330 SM00465 GIY-YIG type nucleases (URI domain) AMS64_12335 SM00421 helix_turn_helix, Lux Regulon AMS64_12335 SM00448 cheY-homologous receiver domain AMS64_12355 SM00382 ATPases associated with a variety of cellular activities AMS64_12360 SM00849 Metallo-beta-lactamase superfamily AMS64_12410 SM00420 helix_turn_helix, Deoxyribose operon repressor AMS64_12410 SM01134 AMS64_12410 AMS64_12430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_12430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_12520 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_12550 SM00363 S4 RNA-binding domain AMS64_12605 SM00900 AMS64_12605 AMS64_12615 SM00478 endonuclease III AMS64_12615 SM00525 AMS64_12615 AMS64_12655 SM00851 MGS-like domain AMS64_12655 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMS64_12660 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMS64_12705 SM00382 ATPases associated with a variety of cellular activities AMS64_12715 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_12725 SM00382 ATPases associated with a variety of cellular activities AMS64_12735 SM01005 Alanine racemase, C-terminal domain AMS64_12745 SM00382 ATPases associated with a variety of cellular activities AMS64_12750 SM00382 ATPases associated with a variety of cellular activities AMS64_12790 SM00834 Putative regulatory protein AMS64_12855 SM01329 AMS64_12855 AMS64_12860 SM00342 helix_turn_helix, arabinose operon control protein AMS64_12870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_12870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_12880 SM00477 DNA/RNA non-specific endonuclease AMS64_12880 SM00892 DNA/RNA non-specific endonuclease AMS64_12975 SM00267 diguanylate cyclase AMS64_13000 SM00028 Tetratricopeptide repeats AMS64_13000 SM00448 cheY-homologous receiver domain AMS64_13065 SM00382 ATPases associated with a variety of cellular activities AMS64_13085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_13095 SM00479 AMS64_13095 AMS64_13110 SM00849 Metallo-beta-lactamase superfamily AMS64_13115 SM00257 Lysin motif AMS64_13135 SM00487 DEAD-like helicases superfamily AMS64_13135 SM00490 helicase superfamily c-terminal domain AMS64_13140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_13140 SM00387 Histidine kinase-like ATPases AMS64_13140 SM00388 His Kinase A (phosphoacceptor) domain AMS64_13145 SM00448 cheY-homologous receiver domain AMS64_13145 SM00862 Transcriptional regulatory protein, C terminal AMS64_13230 SM00155 Phospholipase D. Active site motifs. AMS64_13275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_13275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_13280 SM00855 Phosphoglycerate mutase family AMS64_13305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_13305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_13320 SM00849 Metallo-beta-lactamase superfamily AMS64_13340 SM00563 Phosphate acyltransferases AMS64_13350 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMS64_13360 SM00867 YceI-like domain AMS64_13380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_13380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_13385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_13385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_13395 SM00852 Probable molybdopterin binding domain AMS64_13440 SM00382 ATPases associated with a variety of cellular activities AMS64_13470 SM00852 Probable molybdopterin binding domain AMS64_13495 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS64_13510 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_13515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_13515 SM00387 Histidine kinase-like ATPases AMS64_13520 SM00421 helix_turn_helix, Lux Regulon AMS64_13520 SM00448 cheY-homologous receiver domain AMS64_13525 SM00464 Found in ATP-dependent protease La (LON) AMS64_13530 SM00387 Histidine kinase-like ATPases AMS64_13530 SM00388 His Kinase A (phosphoacceptor) domain AMS64_13530 SM00448 cheY-homologous receiver domain AMS64_13535 SM00897 FIST N domain AMS64_13535 SM01204 AMS64_13535 AMS64_13650 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_13650 SM00073 Histidine Phosphotransfer domain AMS64_13650 SM00387 Histidine kinase-like ATPases AMS64_13650 SM00388 His Kinase A (phosphoacceptor) domain AMS64_13650 SM00448 cheY-homologous receiver domain AMS64_13655 SM00052 Putative diguanylate phosphodiesterase AMS64_13655 SM00448 cheY-homologous receiver domain AMS64_13660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS64_13670 SM00481 DNA polymerase alpha chain like domain AMS64_13765 SM00342 helix_turn_helix, arabinose operon control protein AMS64_13845 SM00382 ATPases associated with a variety of cellular activities AMS64_13915 SM00382 ATPases associated with a variety of cellular activities AMS64_13980 SM00528 Domain in histone-like proteins of HNS family AMS64_14240 SM00528 Domain in histone-like proteins of HNS family AMS64_14265 SM01144 AMS64_14265 AMS64_14275 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMS64_14280 SM00028 Tetratricopeptide repeats AMS64_14290 SM00411 bacterial (prokaryotic) histone like domain AMS64_14295 SM00316 Ribosomal protein S1-like RNA-binding domain AMS64_14345 SM00052 Putative diguanylate phosphodiesterase AMS64_14345 SM00267 diguanylate cyclase AMS64_14355 SM00448 cheY-homologous receiver domain AMS64_14360 SM00091 PAS domain AMS64_14385 SM00360 RNA recognition motif AMS64_14395 SM00382 ATPases associated with a variety of cellular activities AMS64_14405 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_14405 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMS64_14440 SM01126 AMS64_14440 AMS64_14515 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMS64_14520 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS64_14520 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMS64_14565 SM00091 PAS domain AMS64_14565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_14570 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_14575 SM00052 Putative diguanylate phosphodiesterase AMS64_14575 SM00267 diguanylate cyclase AMS64_14595 SM00487 DEAD-like helicases superfamily AMS64_14595 SM00490 helicase superfamily c-terminal domain AMS64_14620 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_14620 SM01091 Transporter associated domain AMS64_14630 SM00829 Enoylreductase AMS64_14705 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_14705 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMS64_14710 SM00382 ATPases associated with a variety of cellular activities AMS64_14725 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_14725 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMS64_14785 SM00382 ATPases associated with a variety of cellular activities AMS64_14855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMS64_14870 SM00091 PAS domain AMS64_14870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_14875 SM00671 Sel1-like repeats. AMS64_14930 SM00487 DEAD-like helicases superfamily AMS64_14935 SM00327 von Willebrand factor (vWF) type A domain AMS64_14940 SM00382 ATPases associated with a variety of cellular activities AMS64_15120 SM00981 AMS64_15120 AMS64_15135 SM01359 AMS64_15135 AMS64_15135 SM01360 AMS64_15135 AMS64_15145 SM00450 Rhodanese Homology Domain AMS64_15150 SM00052 Putative diguanylate phosphodiesterase AMS64_15150 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMS64_15150 SM00091 PAS domain AMS64_15150 SM00267 diguanylate cyclase AMS64_15195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_15195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_15225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_15225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_15285 SM00830 Chorismate mutase type II AMS64_15295 SM00491 AMS64_15295 AMS64_15315 SM00098 Alkaline phosphatase homologues AMS64_15320 SM00098 Alkaline phosphatase homologues AMS64_15340 SM00421 helix_turn_helix, Lux Regulon AMS64_15340 SM00448 cheY-homologous receiver domain AMS64_15345 SM00387 Histidine kinase-like ATPases AMS64_15355 SM00267 diguanylate cyclase AMS64_15360 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_15360 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMS64_15370 SM00382 ATPases associated with a variety of cellular activities AMS64_15375 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_15400 SM01091 Transporter associated domain AMS64_15410 SM00382 ATPases associated with a variety of cellular activities AMS64_15665 SM00530 Helix-turn-helix XRE-family like proteins AMS64_15715 SM00382 ATPases associated with a variety of cellular activities AMS64_15715 SM00448 cheY-homologous receiver domain AMS64_15720 SM00091 PAS domain AMS64_15720 SM00387 Histidine kinase-like ATPases AMS64_15720 SM00388 His Kinase A (phosphoacceptor) domain AMS64_15725 SM00382 ATPases associated with a variety of cellular activities AMS64_15750 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_15750 SM00924 MgtE intracellular N domain AMS64_15765 SM00047 Lysozyme subfamily 2 AMS64_15810 SM00138 Methyltransferase, chemotaxis proteins AMS64_15815 SM00260 Two component signalling adaptor domain AMS64_15815 SM00448 cheY-homologous receiver domain AMS64_15820 SM00858 AMS64_15820 AMS64_15850 SM00363 S4 RNA-binding domain AMS64_15855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_15880 SM00420 helix_turn_helix, Deoxyribose operon repressor AMS64_15880 SM01134 AMS64_15880 AMS64_15910 SM00357 Cold shock protein domain AMS64_15920 SM00861 Transketolase, pyrimidine binding domain AMS64_15935 SM00823 Phosphopantetheine attachment site AMS64_15970 SM00354 helix_turn _helix lactose operon repressor AMS64_15980 SM00052 Putative diguanylate phosphodiesterase AMS64_15980 SM00267 diguanylate cyclase AMS64_16050 SM00382 ATPases associated with a variety of cellular activities AMS64_16110 SM01081 Putative carbohydrate binding domain AMS64_16140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_16145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMS64_16150 SM00448 cheY-homologous receiver domain AMS64_16150 SM00850 LytTr DNA-binding domain AMS64_16170 SM00487 DEAD-like helicases superfamily AMS64_16170 SM00490 helicase superfamily c-terminal domain AMS64_16210 SM00890 Domain of unknown function AMS64_16230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_16255 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_16255 SM00876 Biotin and Thiamin Synthesis associated domain AMS64_16265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_16315 SM01091 Transporter associated domain AMS64_16335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_16335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_16400 SM00091 PAS domain AMS64_16400 SM00267 diguanylate cyclase AMS64_16415 SM00382 ATPases associated with a variety of cellular activities AMS64_16445 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMS64_16470 SM00354 helix_turn _helix lactose operon repressor AMS64_16475 SM00640 Glycosyl hydrolases family 32 AMS64_16495 SM00271 DnaJ molecular chaperone homology domain AMS64_16520 SM01131 AMS64_16520 AMS64_16530 SM00382 ATPases associated with a variety of cellular activities AMS64_16545 SM00528 Domain in histone-like proteins of HNS family AMS64_16620 SM00382 ATPases associated with a variety of cellular activities AMS64_16685 SM00382 ATPases associated with a variety of cellular activities AMS64_16750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_16755 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_16850 SM00363 S4 RNA-binding domain AMS64_16870 SM00481 DNA polymerase alpha chain like domain AMS64_16940 SM00382 ATPases associated with a variety of cellular activities AMS64_16950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMS64_16975 SM00448 cheY-homologous receiver domain AMS64_16975 SM00862 Transcriptional regulatory protein, C terminal AMS64_16990 SM00382 ATPases associated with a variety of cellular activities AMS64_16995 SM00382 ATPases associated with a variety of cellular activities AMS64_17030 SM00448 cheY-homologous receiver domain AMS64_17030 SM00862 Transcriptional regulatory protein, C terminal AMS64_17035 SM00387 Histidine kinase-like ATPases AMS64_17060 SM00530 Helix-turn-helix XRE-family like proteins AMS64_17160 SM00267 diguanylate cyclase AMS64_17185 SM00382 ATPases associated with a variety of cellular activities AMS64_17200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_17200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_17205 SM00382 ATPases associated with a variety of cellular activities AMS64_17225 SM00382 ATPases associated with a variety of cellular activities AMS64_17340 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_17355 SM00267 diguanylate cyclase AMS64_17400 SM00530 Helix-turn-helix XRE-family like proteins AMS64_17425 SM00919 Malic enzyme, NAD binding domain AMS64_17425 SM01274 AMS64_17425 AMS64_17430 SM00342 helix_turn_helix, arabinose operon control protein AMS64_17445 SM00267 diguanylate cyclase AMS64_17530 SM00091 PAS domain AMS64_17530 SM00387 Histidine kinase-like ATPases AMS64_17530 SM00388 His Kinase A (phosphoacceptor) domain AMS64_17535 SM00448 cheY-homologous receiver domain AMS64_17535 SM00862 Transcriptional regulatory protein, C terminal AMS64_17545 SM00382 ATPases associated with a variety of cellular activities AMS64_17555 SM00342 helix_turn_helix, arabinose operon control protein AMS64_17565 SM00448 cheY-homologous receiver domain AMS64_17570 SM00387 Histidine kinase-like ATPases AMS64_17575 SM00919 Malic enzyme, NAD binding domain AMS64_17575 SM01274 AMS64_17575 AMS64_17585 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS64_17600 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_17630 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMS64_17630 SM00292 breast cancer carboxy-terminal domain AMS64_17630 SM00532 Ligase N family AMS64_17635 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMS64_17670 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_17695 SM00642 Alpha-amylase domain AMS64_17705 SM00421 helix_turn_helix, Lux Regulon AMS64_17705 SM00448 cheY-homologous receiver domain AMS64_17730 SM00267 diguanylate cyclase AMS64_17735 SM00977 TilS substrate C-terminal domain AMS64_17770 SM00862 Transcriptional regulatory protein, C terminal AMS64_17785 SM00849 Metallo-beta-lactamase superfamily AMS64_17825 SM00363 S4 RNA-binding domain AMS64_17850 SM00421 helix_turn_helix, Lux Regulon AMS64_17865 SM00829 Enoylreductase AMS64_17875 SM00861 Transketolase, pyrimidine binding domain AMS64_17885 SM00731 SprT homologues. AMS64_17910 SM00732 Likely ribonuclease with RNase H fold. AMS64_17940 SM00460 Transglutaminase/protease-like homologues AMS64_17965 SM00481 DNA polymerase alpha chain like domain AMS64_17995 SM00935 Outer membrane protein (OmpH-like) AMS64_18005 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS64_18050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_18130 SM00028 Tetratricopeptide repeats AMS64_18135 SM00267 diguanylate cyclase AMS64_18145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMS64_18145 SM00475 5'-3' exonuclease AMS64_18150 SM01329 AMS64_18150 AMS64_18180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_18180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_18250 SM00900 AMS64_18250 AMS64_18330 SM00422 helix_turn_helix, mercury resistance AMS64_18365 SM00830 Chorismate mutase type II AMS64_18405 SM00530 Helix-turn-helix XRE-family like proteins AMS64_18540 SM00248 ankyrin repeats AMS64_18565 SM00671 Sel1-like repeats. AMS64_18630 SM00463 Small MutS-related domain AMS64_18670 SM00342 helix_turn_helix, arabinose operon control protein AMS64_18670 SM00478 endonuclease III AMS64_18670 SM01009 AlkA N-terminal domain AMS64_18700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_18705 SM00448 cheY-homologous receiver domain AMS64_18715 SM00073 Histidine Phosphotransfer domain AMS64_18715 SM00260 Two component signalling adaptor domain AMS64_18715 SM00387 Histidine kinase-like ATPases AMS64_18715 SM01231 AMS64_18715 AMS64_18720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_18720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_18725 SM00260 Two component signalling adaptor domain AMS64_18730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_18735 SM00138 Methyltransferase, chemotaxis proteins AMS64_18745 SM00448 cheY-homologous receiver domain AMS64_18750 SM00316 Ribosomal protein S1-like RNA-binding domain AMS64_18750 SM00322 K homology RNA-binding domain AMS64_18755 SM01387 AMS64_18755 AMS64_18775 SM00316 Ribosomal protein S1-like RNA-binding domain AMS64_18815 SM00382 ATPases associated with a variety of cellular activities AMS64_18825 SM01103 AMS64_18825 AMS64_18860 SM00861 Transketolase, pyrimidine binding domain AMS64_18880 SM00382 ATPases associated with a variety of cellular activities AMS64_18905 SM00020 Trypsin-like serine protease AMS64_18940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_18940 SM00387 Histidine kinase-like ATPases AMS64_18940 SM00388 His Kinase A (phosphoacceptor) domain AMS64_18940 SM00448 cheY-homologous receiver domain AMS64_18955 SM00448 cheY-homologous receiver domain AMS64_18955 SM00862 Transcriptional regulatory protein, C terminal AMS64_18980 SM00052 Putative diguanylate phosphodiesterase AMS64_18980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMS64_18980 SM00091 PAS domain AMS64_18980 SM00267 diguanylate cyclase AMS64_19005 SM00878 Biotin carboxylase C-terminal domain AMS64_19030 SM00829 Enoylreductase AMS64_19040 SM01266 AMS64_19040 AMS64_19065 SM00028 Tetratricopeptide repeats AMS64_19115 SM00382 ATPases associated with a variety of cellular activities AMS64_19120 SM00382 ATPases associated with a variety of cellular activities AMS64_19130 SM00984 UDP binding domain AMS64_19170 SM00382 ATPases associated with a variety of cellular activities AMS64_19195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_19195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_19205 SM00357 Cold shock protein domain AMS64_19245 SM00479 AMS64_19245 AMS64_19280 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMS64_19305 SM00271 DnaJ molecular chaperone homology domain AMS64_19335 SM00650 Ribosomal RNA adenine dimethylases AMS64_19350 SM00530 Helix-turn-helix XRE-family like proteins AMS64_19400 SM00244 prohibitin homologues AMS64_19405 SM00244 prohibitin homologues AMS64_19425 SM00853 MutL C terminal dimerisation domain AMS64_19425 SM01340 AMS64_19425 AMS64_19435 SM00257 Lysin motif AMS64_19435 SM00646 AMS64_19435 AMS64_19465 SM00382 ATPases associated with a variety of cellular activities AMS64_19465 SM00930 AMS64_19465 AMS64_19480 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMS64_19485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_19485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_19495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS64_19500 SM00073 Histidine Phosphotransfer domain AMS64_19500 SM00091 PAS domain AMS64_19500 SM00387 Histidine kinase-like ATPases AMS64_19500 SM00388 His Kinase A (phosphoacceptor) domain AMS64_19500 SM00448 cheY-homologous receiver domain AMS64_19545 SM01130 AMS64_19545 AMS64_19580 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMS64_19595 SM00448 cheY-homologous receiver domain AMS64_19605 SM00382 ATPases associated with a variety of cellular activities AMS64_19675 SM00014 Acid phosphatase homologues AMS64_19685 SM00917 LeuA allosteric (dimerisation) domain AMS64_19690 SM01329 AMS64_19690 AMS64_19725 SM00382 ATPases associated with a variety of cellular activities AMS64_19730 SM00670 Large family of predicted nucleotide-binding domains AMS64_19770 SM00052 Putative diguanylate phosphodiesterase AMS64_19770 SM00267 diguanylate cyclase AMS64_19785 SM00883 Chaperonin 10 Kd subunit AMS64_19825 SM00400 zinc finger AMS64_19825 SM00493 AMS64_19825 AMS64_19825 SM00766 DNA primase DnaG DnaB-binding AMS64_19850 SM01209 AMS64_19850 AMS64_19850 SM01210 AMS64_19850 AMS64_19855 SM00798 AICARFT/IMPCHase bienzyme AMS64_19855 SM00851 MGS-like domain AMS64_19860 SM00422 helix_turn_helix, mercury resistance AMS64_19875 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_19925 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS64_19935 SM00822 AMS64_19935 AMS64_19940 SM00028 Tetratricopeptide repeats AMS64_19940 SM00267 diguanylate cyclase AMS64_19945 SM00327 von Willebrand factor (vWF) type A domain AMS64_19950 SM00382 ATPases associated with a variety of cellular activities AMS64_19990 SM00829 Enoylreductase AMS64_20045 SM00411 bacterial (prokaryotic) histone like domain AMS64_20060 SM00382 ATPases associated with a variety of cellular activities AMS64_20095 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AMS64_20100 SM01133 AMS64_20100 AMS64_20135 SM00938 Nitrogen regulatory protein P-II AMS64_20195 SM00904 Riboflavin kinase AMS64_20210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMS64_20240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMS64_20250 SM00927 DNA mismatch repair enzyme MutH AMS64_20280 SM00382 ATPases associated with a variety of cellular activities AMS64_20280 SM00962 SRP54-type protein, GTPase domain AMS64_20280 SM00963 SRP54-type protein, helical bundle domain AMS64_20290 SM01091 Transporter associated domain AMS64_20305 SM00671 Sel1-like repeats. AMS64_20325 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_20330 SM00382 ATPases associated with a variety of cellular activities AMS64_20345 SM00382 ATPases associated with a variety of cellular activities AMS64_20360 SM00938 Nitrogen regulatory protein P-II AMS64_20390 SM00382 ATPases associated with a variety of cellular activities AMS64_20410 SM01152 AMS64_20410 AMS64_20485 SM00487 DEAD-like helicases superfamily AMS64_20485 SM00490 helicase superfamily c-terminal domain AMS64_20565 SM00245 tail specific protease AMS64_20625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_20625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_20625 SM01049 AMS64_20625 AMS64_20640 SM00382 ATPases associated with a variety of cellular activities AMS64_20670 SM01266 AMS64_20670 AMS64_20745 SM01130 AMS64_20745 AMS64_20880 SM00530 Helix-turn-helix XRE-family like proteins AMS64_20910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_20910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_20920 SM00267 diguanylate cyclase AMS64_20920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_20960 SM00421 helix_turn_helix, Lux Regulon AMS64_20970 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_20985 SM00357 Cold shock protein domain AMS64_21000 SM01120 AMS64_21000 AMS64_21015 SM00091 PAS domain AMS64_21030 SM00014 Acid phosphatase homologues AMS64_21040 SM00363 S4 RNA-binding domain AMS64_21055 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_21055 SM00895 AMS64_21055 AMS64_21085 SM00267 diguanylate cyclase AMS64_21105 SM00267 diguanylate cyclase AMS64_21135 SM00876 Biotin and Thiamin Synthesis associated domain AMS64_21170 SM00999 Aerolysin toxin AMS64_21185 SM00448 cheY-homologous receiver domain AMS64_21185 SM00862 Transcriptional regulatory protein, C terminal AMS64_21190 SM00388 His Kinase A (phosphoacceptor) domain AMS64_21200 SM01018 B12 binding domain AMS64_21240 SM00487 DEAD-like helicases superfamily AMS64_21270 SM00530 Helix-turn-helix XRE-family like proteins AMS64_21325 SM00886 Stress responsive A/B Barrel Domain AMS64_21335 SM00316 Ribosomal protein S1-like RNA-binding domain AMS64_21405 SM00382 ATPases associated with a variety of cellular activities AMS64_21420 SM00965 Secretin and TonB N terminus short domain AMS64_21450 SM00052 Putative diguanylate phosphodiesterase AMS64_21450 SM00267 diguanylate cyclase AMS64_21455 SM00052 Putative diguanylate phosphodiesterase AMS64_21485 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS64_21485 SM00866 AMS64_21485 AMS64_21490 SM00947 Carbonic anhydrase AMS64_21505 SM00382 ATPases associated with a variety of cellular activities AMS64_21510 SM00382 ATPases associated with a variety of cellular activities AMS64_21510 SM00962 SRP54-type protein, GTPase domain AMS64_21510 SM00963 SRP54-type protein, helical bundle domain AMS64_21550 SM00822 AMS64_21550 AMS64_21580 SM00155 Phospholipase D. Active site motifs. AMS64_21585 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_21695 SM00838 Elongation factor G C-terminus AMS64_21695 SM00889 Elongation factor G, domain IV AMS64_21735 SM00663 RNA polymerase I subunit A N-terminus AMS64_21760 SM00649 Ribosomal protein L11/L12 AMS64_21765 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMS64_21765 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMS64_21820 SM00342 helix_turn_helix, arabinose operon control protein AMS64_21835 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMS64_21835 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMS64_21835 SM00493 AMS64_21835 AMS64_21840 SM00448 cheY-homologous receiver domain AMS64_21845 SM00100 Cyclic nucleotide-monophosphate binding domain AMS64_21845 SM00387 Histidine kinase-like ATPases AMS64_21865 SM00387 Histidine kinase-like ATPases AMS64_21870 SM00448 cheY-homologous receiver domain AMS64_21870 SM00862 Transcriptional regulatory protein, C terminal AMS64_21900 SM00382 ATPases associated with a variety of cellular activities AMS64_21900 SM00448 cheY-homologous receiver domain AMS64_21910 SM00387 Histidine kinase-like ATPases AMS64_21910 SM00388 His Kinase A (phosphoacceptor) domain AMS64_21925 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS64_21935 SM00062 Bacterial periplasmic substrate-binding proteins AMS64_21940 SM00344 helix_turn_helix ASNC type AMS64_21950 SM00382 ATPases associated with a variety of cellular activities AMS64_21950 SM01086 C-terminal, D2-small domain, of ClpB protein AMS64_21960 SM00363 S4 RNA-binding domain AMS64_22010 SM00530 Helix-turn-helix XRE-family like proteins AMS64_22180 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMS64_22180 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMS64_22190 SM00342 helix_turn_helix, arabinose operon control protein AMS64_22200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_22200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_22270 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS64_22320 SM01001 AIR carboxylase AMS64_22340 SM00257 Lysin motif AMS64_22375 SM01230 AMS64_22375 AMS64_22385 SM00091 PAS domain AMS64_22385 SM00387 Histidine kinase-like ATPases AMS64_22385 SM00388 His Kinase A (phosphoacceptor) domain AMS64_22390 SM00382 ATPases associated with a variety of cellular activities AMS64_22390 SM00448 cheY-homologous receiver domain AMS64_22445 SM00530 Helix-turn-helix XRE-family like proteins AMS64_22460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS64_22460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS64_22575 SM00563 Phosphate acyltransferases AMS64_22580 SM00563 Phosphate acyltransferases